BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015656
(403 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225438323|ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
gi|296082630|emb|CBI21635.3| unnamed protein product [Vitis vinifera]
Length = 420
Score = 569 bits (1466), Expect = e-160, Method: Compositional matrix adjust.
Identities = 275/420 (65%), Positives = 332/420 (79%), Gaps = 24/420 (5%)
Query: 4 RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
RS +++ L+ KLG LG C+R SS ++RFAALWGNGD+GRLGLGSLES+WRP
Sbjct: 3 RSCMRVSQSALQS--KLG--LGFCRRLSSSEPRKRFAALWGNGDFGRLGLGSLESQWRPA 58
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
VCSAF+ HSL A+ACGGAHTLFLTE+GCVYA GLNDFGQLG+S + Y+ EPL +S L K
Sbjct: 59 VCSAFDHHSLVAIACGGAHTLFLTESGCVYAAGLNDFGQLGVSVDKNYTTEPLEVSALPK 118
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+++ I+ GY+HS+AIT DGELYMWGKNSNGQLGLGKKAA + +P+KVECL+GI K A
Sbjct: 119 KIIHIAAGYYHSAAITADGELYMWGKNSNGQLGLGKKAANAVSVPSKVECLNGISIKMVA 178
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
LG E SVA T G+ LSWGAGGSGRLGHG ESS+LGF R++SEY PRLI+ LEG+KVK
Sbjct: 179 LGSEHSVAATDQGEALSWGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNV 238
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI------------------- 284
AAG LHSACIDENG V+IFG+RA+DK F+E +A PS+I
Sbjct: 239 AAGLLHSACIDENGSVFIFGERAMDKFGFREAKNATAPSMISELPYSKQVACGGYHTCVI 298
Query: 285 -SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 343
S GEL+TWGSNENGCLG+G ++ +H PER++GPFS++PV QVSCGWKHTAAISEG + T
Sbjct: 299 SSSGELFTWGSNENGCLGMGFMETIHFPERIEGPFSKNPVSQVSCGWKHTAAISEGNVFT 358
Query: 344 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
WGWGGS+GTFS+DGHSSGGQLG G+DVD+I P +V F E+V+ALQVSCGFNHTGA+LEY+
Sbjct: 359 WGWGGSYGTFSDDGHSSGGQLGQGSDVDHIKPKMVEFEESVRALQVSCGFNHTGAILEYI 418
>gi|356508920|ref|XP_003523201.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 417
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 271/400 (67%), Positives = 317/400 (79%), Gaps = 20/400 (5%)
Query: 24 LGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT 83
LG R S +RFAALWGNGDYGRLGLG+L+S+W+PVVC AF +L A+ACGGAHT
Sbjct: 18 LGFPTRSFSRDAGKRFAALWGNGDYGRLGLGNLDSQWKPVVCPAFRNKTLNAIACGGAHT 77
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE 143
LFLTE GCVYATGLNDFGQLG+SE+ YS+EPL + G +K+VVQIS GY+HS AITVDGE
Sbjct: 78 LFLTEDGCVYATGLNDFGQLGVSESKHYSVEPLCVFGEEKKVVQISAGYNHSCAITVDGE 137
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
LYMWGKN++GQLGLGK+A ++P+PTKVE L GI K AALG E SVA++ GG SWG
Sbjct: 138 LYMWGKNTSGQLGLGKRAPNIVPLPTKVEYLKGINIKMAALGSEHSVAISDGGAAFSWGI 197
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G SGRLGHG ESS+LGF +S SEYTPRLIK+LEG+KVK AAG L+SAC DENG V++FG
Sbjct: 198 GVSGRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIKVKYVAAGLLNSACTDENGCVFVFG 257
Query: 264 DRAVDKMLFQEGNHARRPSLIS--------------------GGELYTWGSNENGCLGIG 303
+R ++K+ +E + A +PSLIS GELYTWGSNENGCLGIG
Sbjct: 258 ERGIEKLRLKEMSDATKPSLISELPSSKEVACGGYHTCVLTNSGELYTWGSNENGCLGIG 317
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
S DV+H PE+VQGPF +S V QVSCGWKHTAAISEG++ TWGWGGS+GTFSE GHSS GQ
Sbjct: 318 SSDVIHLPEKVQGPFLKSSVSQVSCGWKHTAAISEGRVFTWGWGGSNGTFSEVGHSSSGQ 377
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
LGHG+DVDYI+PT V FGE+VKALQVSCGFNHTGA+LEY
Sbjct: 378 LGHGSDVDYINPTRVCFGEDVKALQVSCGFNHTGAILEYA 417
>gi|224083557|ref|XP_002307065.1| predicted protein [Populus trichocarpa]
gi|222856514|gb|EEE94061.1| predicted protein [Populus trichocarpa]
Length = 419
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 284/415 (68%), Positives = 329/415 (79%), Gaps = 26/415 (6%)
Query: 15 KQDIKLGSKLGIC-KRWISSTL---QRRFAALWGNGDYGRLGLGSLESRWRPVV--CSAF 68
K + +G LG C KRW+SS+ ++R AA+WGNGDYGRLG G+L+S WRP + S+F
Sbjct: 3 KNSVLIGGGLGYCYKRWMSSSSSEGRKRSAAVWGNGDYGRLGYGNLDSMWRPKLMNSSSF 62
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI 128
+LK+++CGGAHTLFLTETG VYATGLNDFGQLG+S N Y +EPL +SGLKKE+VQI
Sbjct: 63 HNSNLKSISCGGAHTLFLTETGRVYATGLNDFGQLGVSNNTTYCMEPLEVSGLKKEIVQI 122
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S GYHHS AITVDGELY WGKNSNGQLGLGKKA V+P+PTKVECLSGI K AL E
Sbjct: 123 SAGYHHSCAITVDGELYTWGKNSNGQLGLGKKAENVVPVPTKVECLSGINIKMVALASEH 182
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S+AVT GG+ LSWG GGSGRLGHG +SS+LGF RS+SEYTPR IK+LEGVKVK AAG L
Sbjct: 183 SIAVTDGGQALSWGGGGSGRLGHGHQSSLLGFFRSSSEYTPRHIKKLEGVKVKNIAAGLL 242
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI--------------------SGGE 288
HSACIDENG VYIFG++AVDK+ F + N+A PS+I SGGE
Sbjct: 243 HSACIDENGSVYIFGEKAVDKLAFGDANNATTPSMIGKLPYSQEVACGGYHTCVITSGGE 302
Query: 289 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGG 348
LYTWGSNENGCLG GSIDVLH PERV+GPF SPV++VSCGWKHTAAISEG + TWGWGG
Sbjct: 303 LYTWGSNENGCLGNGSIDVLHIPERVEGPFLRSPVEKVSCGWKHTAAISEGNVFTWGWGG 362
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
SHGTFSEDG SSGGQLGHG+D DY++PT+V F + +KAL+VSCGFNHTGA+LE V
Sbjct: 363 SHGTFSEDGLSSGGQLGHGDDFDYVNPTLVAFEKKMKALEVSCGFNHTGAILESV 417
>gi|449453906|ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
sativus]
Length = 481
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 259/394 (65%), Positives = 308/394 (78%), Gaps = 21/394 (5%)
Query: 29 RWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
RW +S +RF A+WGNGD+GRLGLG+L+S+W PV CS+F++ LK +ACGGAHTLFLTE
Sbjct: 88 RWFASDSGKRFGAVWGNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIACGGAHTLFLTE 147
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
+G VYATGLN+FGQLGIS+ +S EP+ + + KE + IS GY+HS +T DGELYMWG
Sbjct: 148 SGRVYATGLNNFGQLGISDEKRFSTEPVEVR-IPKEAMHISAGYNHSCVVTADGELYMWG 206
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
NSNGQLGLGKK+AK + +PTKV+ L GI K+AALG + S+AV GG+V SWG G SGR
Sbjct: 207 VNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVADGGEVFSWGDGRSGR 266
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG ES+ LGFL+STSE+TPRLIKELEG+KVK AAG LHSAC+DENG VYIFG+RA +
Sbjct: 267 LGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFGERATN 326
Query: 269 KMLFQEGNHARRPSLIS--------------------GGELYTWGSNENGCLGIGSIDVL 308
++ F E N A PSLIS GG+LY+WGSNENGCLG GS V
Sbjct: 327 RVSFGEANKATTPSLISTLLDCEEVACGGYHTCVLTKGGDLYSWGSNENGCLGNGSTSVS 386
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
H PERV+GPFS+SPV +VSCGWKHTAAIS G I TWGWGGSHGTFS DGHSSGGQLGHG+
Sbjct: 387 HLPERVEGPFSKSPVSKVSCGWKHTAAISGGAIFTWGWGGSHGTFSVDGHSSGGQLGHGS 446
Query: 369 DVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 402
DVDY+ PT ++ GENVK +QVSCGFNHTGA+LEY
Sbjct: 447 DVDYVKPTKIDLGENVKVVQVSCGFNHTGAILEY 480
>gi|356518818|ref|XP_003528074.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC4-like [Glycine max]
Length = 404
Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust.
Identities = 254/385 (65%), Positives = 312/385 (81%), Gaps = 19/385 (4%)
Query: 37 RRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
+RF ALWGNGD+GRLGLG+L+S+W+PVVC AF +LKA+ACGGAHTLFLT+ GCVYATG
Sbjct: 19 KRFVALWGNGDFGRLGLGNLDSQWKPVVCPAFRDRTLKAIACGGAHTLFLTDNGCVYATG 78
Query: 97 LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
LNDFGQLG+SE+ YS+EPL + G +K+VVQ+S GY+HS AITVDGELYMWGKN++ QLG
Sbjct: 79 LNDFGQLGVSESKHYSVEPLCVFGEEKKVVQVSAGYNHSCAITVDGELYMWGKNTSVQLG 138
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
LGK+A ++P+PTKVE L+GI K AALG + S+A++ GG+ SWG G SGRLGHG ESS
Sbjct: 139 LGKRAPNIVPLPTKVEYLNGINIKMAALGSDHSLAISDGGEAFSWGVGVSGRLGHGHESS 198
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
ILGF +S SEYTPRLIK+LEG+KVK A+G L+SAC DENG V++FG+RA++++ + +
Sbjct: 199 ILGFFKSYSEYTPRLIKDLEGIKVKYVASGLLNSACTDENGSVFVFGERAIERLRLKAMS 258
Query: 277 HARRPSLI-------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
A +PSLI + GELYTW SNENGCLGIGS DV+H PE++ GP
Sbjct: 259 DATKPSLIGELPSSKVVCGGYHTCVLTNSGELYTWXSNENGCLGIGSSDVIHLPEKIXGP 318
Query: 318 FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 377
F +S V Q+SCGWK+TAAISEG++ TWGWGGS+GTFSE GHSS GQLGHG+DVDYI+PT
Sbjct: 319 FLKSSVSQLSCGWKNTAAISEGRVFTWGWGGSNGTFSEVGHSSSGQLGHGSDVDYINPTR 378
Query: 378 VNFGENVKALQVSCGFNHTGALLEY 402
V FGE+VKALQVSCGFNHTGA+LEY
Sbjct: 379 VCFGEDVKALQVSCGFNHTGAILEY 403
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 84/206 (40%), Gaps = 47/206 (22%)
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S+ +G V WG G GRLG G S++ P + +K A G
Sbjct: 13 SLRASGKRFVALWGNGDFGRLGLGNLD---------SQWKPVVCPAFRDRTLKAIACGGA 63
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNH-ARRPSLISG--------------------- 286
H+ + +NG VY G ++ E H + P + G
Sbjct: 64 HTLFLTDNGCVYATGLNDFGQLGVSESKHYSVEPLCVFGEEKKVVQVSAGYNHSCAITVD 123
Query: 287 GELYTWGSNENGCLGIG--SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILT 343
GELY WG N + LG+G + +++ P +V+ + + + G H+ AIS+ G+ +
Sbjct: 124 GELYMWGKNTSVQLGLGKRAPNIVPLPTKVE-YLNGINIKMAALGSDHSLAISDGGEAFS 182
Query: 344 WGWGGSHGTFSEDGHSSGGQLGHGND 369
WG G S G+LGHG++
Sbjct: 183 WGVGVS------------GRLGHGHE 196
>gi|297810989|ref|XP_002873378.1| hypothetical protein ARALYDRAFT_487713 [Arabidopsis lyrata subsp.
lyrata]
gi|297319215|gb|EFH49637.1| hypothetical protein ARALYDRAFT_487713 [Arabidopsis lyrata subsp.
lyrata]
Length = 434
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 260/407 (63%), Positives = 316/407 (77%), Gaps = 20/407 (4%)
Query: 16 QDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA 75
+D KLG C+RW+S+ +RFAA+WG+GDYGRLGLG+L+S+W P CSA HS++A
Sbjct: 27 KDSKLGPIGVSCRRWLSNESGKRFAAMWGSGDYGRLGLGNLDSQWTPAGCSALSDHSIRA 86
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+ACGGAHTLFLTET V+ATGLND GQLG+S+ ++++PL +SGL K+++ IS GY+HS
Sbjct: 87 VACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISAGYYHS 146
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
+AITVDGELYMWGKNS+GQLGLGKKAA+V+ +PTKVE L GI + ALG E SVAVT G
Sbjct: 147 AAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDG 206
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+VLSWG GGSGRLGHG +SS+ G LRS SE+TPRLIKELEG+KVK AAG LHSAC DE
Sbjct: 207 GEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVKNVAAGLLHSACTDE 266
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLIS--------------------GGELYTWGSN 295
NG ++FG+R+++KM F +A PS+IS GGELYTWGSN
Sbjct: 267 NGSAFMFGERSINKMGFGGVRNATTPSIISEVPYAEGVACGGYHTCVVTRGGELYTWGSN 326
Query: 296 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSE 355
ENGCLG S V HSP RV+GPF ES V QVSCGWKHTAAIS+ K+ TWGWGGSHGTFS
Sbjct: 327 ENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAISDNKVFTWGWGGSHGTFSV 386
Query: 356 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 402
DGHSSGGQLGHG+DVDY P +V+ G+NV+A+ +SCGFNHT A+LE+
Sbjct: 387 DGHSSGGQLGHGSDVDYARPAMVDLGKNVRAVHISCGFNHTAAVLEH 433
>gi|30682540|ref|NP_680156.2| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|26452773|dbj|BAC43467.1| unknown protein [Arabidopsis thaliana]
gi|28973187|gb|AAO63918.1| putative UVB-resistance protein UVR8 [Arabidopsis thaliana]
gi|332003957|gb|AED91340.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 434
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 260/409 (63%), Positives = 314/409 (76%), Gaps = 20/409 (4%)
Query: 14 LKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSL 73
L +D KLG C RW+SS +RFAA+WG+GDYGRLGLG+L+S+W P VCSA HS+
Sbjct: 25 LLKDSKLGPIGVCCSRWVSSESGKRFAAMWGSGDYGRLGLGNLDSQWTPAVCSALSDHSI 84
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH 133
A+ACGGAHTLFLTET V+ATGLND GQLG+S+ ++++PL +SGL K+++ IS GY+
Sbjct: 85 TAVACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISAGYY 144
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
HS+AITVDGELYMWGKNS+GQLGLGKKAA+V+ +PTKVE L GI + ALG E SVAVT
Sbjct: 145 HSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVT 204
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
GG+VLSWG GGSGRLGHG +SS+ G LRS SE+TPRLIKELEG+KV AAG LHSAC
Sbjct: 205 DGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACT 264
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLIS--------------------GGELYTWG 293
DENG ++FG+++++KM F +A PS+IS GGELYTWG
Sbjct: 265 DENGSAFMFGEKSINKMGFGGVRNATTPSIISEVPYAEEVACGGYHTCVVTRGGELYTWG 324
Query: 294 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTF 353
SNENGCLG S V HSP RV+GPF ES V QVSCGWKHTAAIS+ + TWGWGGSHGTF
Sbjct: 325 SNENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAISDNNVFTWGWGGSHGTF 384
Query: 354 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 402
S DGHSSGGQLGHG+DVDY P +V+ G+NV+A+ +SCGFNHT A+LE+
Sbjct: 385 SVDGHSSGGQLGHGSDVDYARPAMVDLGKNVRAVHISCGFNHTAAVLEH 433
>gi|13548329|emb|CAC35876.1| putative protein [Arabidopsis thaliana]
Length = 435
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 260/410 (63%), Positives = 314/410 (76%), Gaps = 21/410 (5%)
Query: 14 LKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSL 73
L +D KLG C RW+SS +RFAA+WG+GDYGRLGLG+L+S+W P VCSA HS+
Sbjct: 25 LLKDSKLGPIGVCCSRWVSSESGKRFAAMWGSGDYGRLGLGNLDSQWTPAVCSALSDHSI 84
Query: 74 KALACGGAHTLFLT----------ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
A+ACGGAHTLFLT ET V+ATGLND GQLG+S+ ++++PL +SGL K
Sbjct: 85 TAVACGGAHTLFLTVSDNKLTHVTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDK 144
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+++ IS GY+HS+AITVDGELYMWGKNS+GQLGLGKKAA+V+ +PTKVE L GI + A
Sbjct: 145 DILHISAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVA 204
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
LG E SVAVT GG+VLSWG GGSGRLGHG +SS+ G LRS SE+TPRLIKELEG+KV
Sbjct: 205 LGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNV 264
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS-----------GGELYTW 292
AAG LHSAC DENG ++FG+++++KM F +A PS+IS GGELYTW
Sbjct: 265 AAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNATTPSIISEVPYAEEVACGGGELYTW 324
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT 352
GSNENGCLG S V HSP RV+GPF ES V QVSCGWKHTAAIS+ + TWGWGGSHGT
Sbjct: 325 GSNENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAISDNNVFTWGWGGSHGT 384
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 402
FS DGHSSGGQLGHG+DVDY P +V+ G+NV+A+ +SCGFNHT A+LE+
Sbjct: 385 FSVDGHSSGGQLGHGSDVDYARPAMVDLGKNVRAVHISCGFNHTAAVLEH 434
>gi|242071255|ref|XP_002450904.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
gi|241936747|gb|EES09892.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
Length = 418
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/390 (57%), Positives = 283/390 (72%), Gaps = 25/390 (6%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACGGAHTLFLTETGCV 92
++R AALWGNGDYGRLGLG LESRW P VC F + +LACGGAHTLFLT++G V
Sbjct: 28 RQRVAALWGNGDYGRLGLGVLESRWSPTVCPFFLARAADPPASLACGGAHTLFLTQSGRV 87
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
+ATGLNDFGQLG+ ++ ++LEP+ +SG + VV++S G HHS A+T DG+L++WG+NS
Sbjct: 88 FATGLNDFGQLGVGSSVTHTLEPVEVSGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSG 147
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLGLGK A KV+ PTKV+CL+ K ALG E S+AVT G+VLSWGA GSGRLGHG
Sbjct: 148 GQLGLGKGAGKVVSTPTKVDCLTDFRIKMVALGSEHSIAVTEEGEVLSWGAAGSGRLGHG 207
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
++SSILGF +TSEYTPRLIK +G+K+K AAG LHSACIDE G ++IFG + + F
Sbjct: 208 RQSSILGFSLTTSEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTLFIFGQKT--EKGF 265
Query: 273 QEGNHARRPSLI--------------------SGGELYTWGSNENGCLGIGSIDVLHSPE 312
N A RP+++ G+LY+WGSNENGCLG+G D++ SPE
Sbjct: 266 GRSNEAFRPNIVEEIPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVCSPE 325
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
++ + PV +VSCGWKHTA IS I TWGWGG++GTF E+GHSSGGQLGHGNDVDY
Sbjct: 326 ILKSSLFKLPVSKVSCGWKHTAVISGDDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDY 385
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGALLEY 402
P +V FG+N +A+ VSCGFNHTGA+ EY
Sbjct: 386 FEPMMVPFGKNARAVHVSCGFNHTGAIYEY 415
>gi|222616116|gb|EEE52248.1| hypothetical protein OsJ_34191 [Oryza sativa Japonica Group]
Length = 425
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/395 (56%), Positives = 284/395 (71%), Gaps = 30/395 (7%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF--------EKHSLKALACGGAHTLFLT 87
+RR AALWGNGDYGRLG+G+LESRW P C F + +LACGGAHTLFLT
Sbjct: 30 RRRVAALWGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLT 89
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
E+G V+A GLNDFGQLGI ++ +SLEP+ +SG ++VV++S G HHS A+T DG+L+ W
Sbjct: 90 ESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKLFAW 149
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G+NS+GQLGLGK+A KV+ P KV+CL+ K ALG E S+A T G+VLSWGA G+G
Sbjct: 150 GRNSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEEGEVLSWGAAGAG 209
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG ++SILGF +TSEYTPRLIK L+GVK+K AAG LHSACIDE G ++IFG +
Sbjct: 210 RLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQK-T 268
Query: 268 DKMLFQEGNHARRPSLI--------------------SGGELYTWGSNENGCLGIGSIDV 307
+K + G+ RP+++ G+LY+WGSNENGCLG+G D+
Sbjct: 269 EKGFGRSGDEL-RPTVVEEVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDM 327
Query: 308 LHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
+ SPE ++ + PV +VSCGWKHTA IS G I TWGWGG++GTF E+GHSSGGQLGHG
Sbjct: 328 VRSPEVLKSSLFKFPVSKVSCGWKHTAVISGGDIYTWGWGGANGTFFEEGHSSGGQLGHG 387
Query: 368 NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 402
NDVDY P +V FG+N +A+ VSCGFNHTGA+ EY
Sbjct: 388 NDVDYFEPMMVEFGKNARAVHVSCGFNHTGAIFEY 422
>gi|212721370|ref|NP_001132850.1| uncharacterized protein LOC100194342 [Zea mays]
gi|194695574|gb|ACF81871.1| unknown [Zea mays]
gi|413924971|gb|AFW64903.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 418
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/402 (56%), Positives = 285/402 (70%), Gaps = 31/402 (7%)
Query: 29 RWISSTL------QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACG 79
RW+SS ++R AALWGNGDYGRLGLGSLESRW P VC F + +LACG
Sbjct: 13 RWLSSDAASSKAPRQRVAALWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACG 72
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
GAHTLFLT+ G V+ATGLNDFGQLGI ++ + LEP+ ISG + VV++S G HHS A+T
Sbjct: 73 GAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVT 132
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
DG+L++WG+NS GQLGLGK A KV+ PTKV+CL+ + K ALG E S+AVT G+VL
Sbjct: 133 ADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVL 192
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWGA GSGRLGHG++SSILGF +++EYTPRLIK +G+K+K AAG LHSACIDE G +
Sbjct: 193 SWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTL 252
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLI--------------------SGGELYTWGSNENGC 299
+IFG + + F N RP+++ G+LY+WGSNENGC
Sbjct: 253 FIFGQKT--EKGFGRPNEEFRPNIVEEIPFSEEVACGGYHTCVVTDSGDLYSWGSNENGC 310
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHS 359
LG+G D++ SPE ++ + PV +VSCGWKHTA +S I TWGWGG++GTF E+GHS
Sbjct: 311 LGLGGTDMVRSPEILKSSLFKLPVSKVSCGWKHTAVVSGDDIYTWGWGGANGTFFEEGHS 370
Query: 360 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
SGGQLGHGNDVDY P +V FG N +A+ VSCGFNHTGA+ E
Sbjct: 371 SGGQLGHGNDVDYFEPMMVPFGTNARAVHVSCGFNHTGAIYE 412
>gi|218185898|gb|EEC68325.1| hypothetical protein OsI_36421 [Oryza sativa Indica Group]
Length = 425
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/395 (56%), Positives = 284/395 (71%), Gaps = 30/395 (7%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF--------EKHSLKALACGGAHTLFLT 87
+RR AALWGNGDYGRLG+G+LESRW P C F + +LACGGAHTLFLT
Sbjct: 30 RRRVAALWGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLT 89
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
E+G V+A GLNDFGQLGI ++ +SLEP+ +SG ++VV++S G HHS A+T DG+L+ W
Sbjct: 90 ESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKLFAW 149
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G+NS+GQLGLGK+A KV+ P KV+CL+ K ALG E S+A T G+VLSWGA G+G
Sbjct: 150 GRNSSGQLGLGKRAGKVVSTPRKVDCLADSRVKMVALGSEHSIATTEEGEVLSWGAAGAG 209
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG ++SILGF +TSEYTPRLIK L+GVK+K AAG LHSACIDE G ++IFG +
Sbjct: 210 RLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQK-T 268
Query: 268 DKMLFQEGNHARRPSLI--------------------SGGELYTWGSNENGCLGIGSIDV 307
+K + G+ RP+++ G+LY+WGSNENGCLG+G D+
Sbjct: 269 EKGFGRSGDEL-RPTVVEEVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDM 327
Query: 308 LHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
+ SPE ++ + PV +VSCGWKHTA IS G I TWGWGG++GTF E+GHSSGGQLGHG
Sbjct: 328 VRSPEVLKSSLFKFPVSKVSCGWKHTAVISGGDIYTWGWGGANGTFFEEGHSSGGQLGHG 387
Query: 368 NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 402
NDVDY P +V FG+N +A+ VSCGFNHTGA+ EY
Sbjct: 388 NDVDYFEPMMVEFGKNARAVHVSCGFNHTGAIFEY 422
>gi|357156536|ref|XP_003577490.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Brachypodium distachyon]
Length = 422
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/405 (55%), Positives = 282/405 (69%), Gaps = 33/405 (8%)
Query: 29 RWISS--------TLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS---LKALA 77
RW+S+ RR AALWGNGDYGRLGLG+LESRW P C F + +LA
Sbjct: 17 RWLSTEAVAGSGEPAWRRVAALWGNGDYGRLGLGALESRWNPTACPFFLARAGDPPASLA 76
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
CGGAHTLFLT++G V+ATGLNDFGQLGI + + ++P+ ++G ++VVQIS G HHS A
Sbjct: 77 CGGAHTLFLTQSGRVFATGLNDFGQLGIGSSTTHIVDPIEVTGFGEKVVQISAGNHHSCA 136
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+T DGEL++WGKNS+GQLGLGK KV+ P KV+ L+ + + ALG E S+AVT GG+
Sbjct: 137 VTADGELFVWGKNSSGQLGLGKGVGKVVSTPRKVDYLADVRVRMVALGSEHSIAVTEGGE 196
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
LSWGA G+GRLGHG +SSILGF +SEYTPRLIK L+GVK+K AAG LHSACIDE G
Sbjct: 197 ALSWGAAGAGRLGHGHKSSILGFGMVSSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKG 256
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLI--------------------SGGELYTWGSNEN 297
++IFG + + +F N A RP+++ GG+LY+WGSNEN
Sbjct: 257 TLFIFGQKT--EKVFGRSNDAPRPTVVEEIQFSEEVACGGYHTCALTDGGDLYSWGSNEN 314
Query: 298 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 357
GCLG+G ++ SPE ++ + PV +VSCGWKHTA IS I TWGWGG++GTF E+G
Sbjct: 315 GCLGLGVTGMVRSPEVLRSTLFKLPVSKVSCGWKHTAVISGEDIYTWGWGGANGTFFEEG 374
Query: 358 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 402
SSGGQLGHGNDVDY P +V G N +A+ VSCGFNHTGA+ EY
Sbjct: 375 QSSGGQLGHGNDVDYFEPMMVELGRNARAVHVSCGFNHTGAIFEY 419
>gi|326490515|dbj|BAJ84921.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/391 (57%), Positives = 277/391 (70%), Gaps = 25/391 (6%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF---EKHSLKALACGGAHTLFLTETGCV 92
+RR AALWGNGD+GRLGLG+LESRW P C F +L+CGGAHTLFLTE G V
Sbjct: 29 RRRVAALWGNGDHGRLGLGALESRWSPTACPFFLARPADPPASLSCGGAHTLFLTEGGRV 88
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
+ATGLNDFGQLGI ++ ++L+P+ +SG ++VVQIS G HHS A+T DGEL++WGKNS+
Sbjct: 89 FATGLNDFGQLGIGSSMPHTLDPVEVSGFHEKVVQISAGNHHSCAVTADGELFVWGKNSS 148
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLGLGK A KV+ P KV+ L+ + K ALG E S+ VT G+ LSWGA G GRLGHG
Sbjct: 149 GQLGLGKSAGKVVSTPRKVDYLADVRVKMTALGSEHSIVVTEDGEALSWGAAGGGRLGHG 208
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
+SS LGF +++EYTPRLIK L+G+K+K AAG LHSACIDE G V+IFG + +K+L
Sbjct: 209 HKSSFLGFAMTSNEYTPRLIKNLDGIKIKRIAAGMLHSACIDEKGTVFIFGQK-TEKVLG 267
Query: 273 QEGNHARRPSLI--------------------SGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ N A RPS++ G+LY+WGSNENGCLG+G ++ PE
Sbjct: 268 RS-NDAPRPSVVEEIQFSEEVACGGYHTCAVTDRGDLYSWGSNENGCLGLGGTGMVRFPE 326
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V + PV +VSCGWKHTA IS I TWGWGG++GTF E+GHSSGGQLGHGNDVDY
Sbjct: 327 VVSSSLFKLPVSKVSCGWKHTAVISGEDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDY 386
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
P +V +N +A+ VSCGFNHTGA+LEY
Sbjct: 387 CEPMMVELHKNARAVHVSCGFNHTGAILEYA 417
>gi|255549098|ref|XP_002515604.1| Williams-Beuren syndrome chromosome region 16 protein, putative
[Ricinus communis]
gi|223545242|gb|EEF46749.1| Williams-Beuren syndrome chromosome region 16 protein, putative
[Ricinus communis]
Length = 374
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/321 (62%), Positives = 243/321 (75%), Gaps = 22/321 (6%)
Query: 28 KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLF 85
+RW+SS +R+AA+WGNGD+GRLG GSL+S+WRP ++ S F HSLK++ACGGAHTLF
Sbjct: 11 RRWMSSEAGKRYAAVWGNGDFGRLGTGSLDSQWRPKLLLSSCFANHSLKSIACGGAHTLF 70
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
LTETGCVYATGLNDFGQLGIS N+ Y+ EP+++SGL+KE++QIS GYHHS AITVDGELY
Sbjct: 71 LTETGCVYATGLNDFGQLGISGNLSYTTEPVKVSGLQKEIMQISAGYHHSCAITVDGELY 130
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
MWG+NSNGQLGLGKKA +++P+PTKVE L+G+ K ALG E S+AVT G+ LSWG GG
Sbjct: 131 MWGRNSNGQLGLGKKAQRIVPLPTKVEYLNGLTIKLVALGSEHSIAVTDRGEALSWGLGG 190
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
GRLGH +S F STSEYTPR IK+LE VKVK AAG LHSACID NG V++FG+
Sbjct: 191 FGRLGHSNQSGTFRFWTSTSEYTPRSIKKLEEVKVKSVAAGLLHSACIDVNGSVFVFGEV 250
Query: 266 AVDKMLFQEGNHARRPSLI--------------------SGGELYTWGSNENGCLGIGSI 305
+VD+ F E A PS++ SGGELY WG NENGCLGIGS
Sbjct: 251 SVDRTGFGEAIGAEIPSMVGKLPCANEVSCGGYHTCVVTSGGELYAWGVNENGCLGIGSF 310
Query: 306 DVLHSPERVQGPFSESPVDQV 326
+ LH+PERVQGPF SPV++V
Sbjct: 311 NSLHAPERVQGPFLRSPVEKV 331
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 12/110 (10%)
Query: 291 TWGSNENGCLGIGSIDVLHSPERV-QGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 349
WG+ + G LG GS+D P+ + F+ + ++CG HT ++E
Sbjct: 25 VWGNGDFGRLGTGSLDSQWRPKLLLSSCFANHSLKSIACGGAHTLFLTE----------- 73
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G G + GQLG ++ Y + G + +Q+S G++H+ A+
Sbjct: 74 TGCVYATGLNDFGQLGISGNLSYTTEPVKVSGLQKEIMQISAGYHHSCAI 123
>gi|449508251|ref|XP_004163263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
[Cucumis sativus]
Length = 386
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/317 (61%), Positives = 239/317 (75%), Gaps = 21/317 (6%)
Query: 29 RWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
RW +S +RF A+WGNGD+GRLGLG+L+S+W PV CS+F++ LK +ACGGAHTLFLTE
Sbjct: 71 RWFASDSGKRFGAVWGNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIACGGAHTLFLTE 130
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
+G VYATGLN+FGQLGIS+ +S EP+ + + KE + IS GY+HS +T DGELYMWG
Sbjct: 131 SGRVYATGLNNFGQLGISDEKRFSTEPVEVR-IPKEAMHISAGYNHSCVVTADGELYMWG 189
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
NSNGQLGLGKK+AK + +PTKV+ L GI K+AALG + S+AV GG+V SWG G SGR
Sbjct: 190 VNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVADGGEVFSWGDGRSGR 249
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG ES+ LGFL+STSE+TPRLIKELEG+KVK AAG LHSAC+DENG VYIFG+RA +
Sbjct: 250 LGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFGERATN 309
Query: 269 KMLFQEGNHARRPSLIS--------------------GGELYTWGSNENGCLGIGSIDVL 308
++ F E N A PSLIS GG+LY+WGSNENGCLG GS V
Sbjct: 310 RVSFGEANKATTPSLISTLLDCEEVACGGYHTCVLTKGGDLYSWGSNENGCLGNGSTSVS 369
Query: 309 HSPERVQGPFSESPVDQ 325
H PERV+GPFS+SPV +
Sbjct: 370 HLPERVEGPFSKSPVSK 386
>gi|115485835|ref|NP_001068061.1| Os11g0545800 [Oryza sativa Japonica Group]
gi|113645283|dbj|BAF28424.1| Os11g0545800, partial [Oryza sativa Japonica Group]
Length = 400
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/338 (56%), Positives = 246/338 (72%), Gaps = 22/338 (6%)
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
FLTE+G V+A GLNDFGQLGI ++ +SLEP+ +SG ++VV++S G HHS A+T DG+L
Sbjct: 62 FLTESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKL 121
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ WG+NS+GQLGLGK+A KV+ P KV+CL+ K ALG E S+A T G+VLSWGA
Sbjct: 122 FAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEEGEVLSWGAA 181
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+GRLGHG ++SILGF +TSEYTPRLIK L+GVK+K AAG LHSACIDE G ++IFG
Sbjct: 182 GAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQ 241
Query: 265 RAVDKMLFQEGNHARRPSLI--------------------SGGELYTWGSNENGCLGIGS 304
+ +K + G+ RP+++ G+LY+WGSNENGCLG+G
Sbjct: 242 K-TEKGFGRSGDEL-RPTVVEEVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGG 299
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL 364
D++ SPE ++ + PV +VSCGWKHTA IS G I TWGWGG++GTF E+GHSSGGQL
Sbjct: 300 TDMVRSPEVLKSSLFKFPVSKVSCGWKHTAVISGGDIYTWGWGGANGTFFEEGHSSGGQL 359
Query: 365 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 402
GHGNDVDY P +V FG+N +A+ VSCGFNHTGA+ EY
Sbjct: 360 GHGNDVDYFEPMMVEFGKNARAVHVSCGFNHTGAIFEY 397
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 16/129 (12%)
Query: 52 GLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI-SENIG 110
G G RP V E + +ACGG HT +T++G +Y+ G N+ G LG+ ++
Sbjct: 246 GFGRSGDELRPTVVE--EVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMV 303
Query: 111 YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW------------GKNSNGQLGLG 158
S E L+ S K V ++S G+ H++ I+ G++Y W G +S GQLG G
Sbjct: 304 RSPEVLKSSLFKFPVSKVSCGWKHTAVIS-GGDIYTWGWGGANGTFFEEGHSSGGQLGHG 362
Query: 159 KKAAKVIPI 167
P+
Sbjct: 363 NDVDYFEPM 371
>gi|302803630|ref|XP_002983568.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
gi|300148811|gb|EFJ15469.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
Length = 413
Score = 343 bits (880), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 175/393 (44%), Positives = 244/393 (62%), Gaps = 22/393 (5%)
Query: 31 ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
+S +R+ ALWGNGD GRLGL S++ PV+C A E H +++CGGAHTL LT+ G
Sbjct: 21 VSGKAGKRWVALWGNGDQGRLGLSESGSQFEPVLCRALESHEPCSVSCGGAHTLILTDKG 80
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
V+ATGLN GQLG+ S +P+ + G V I+ G +HS+AIT GE Y+WG+N
Sbjct: 81 RVFATGLNSSGQLGVPLKSESSFDPVEVHGFPDPCVHIAAGRYHSAAITSSGETYVWGRN 140
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
S GQLGLGK+A V P K+E L+G+ K ALG + S+ + G+VLSWG G LG
Sbjct: 141 SEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHSLGLAETGQVLSWGTNRFGCLG 200
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
HG+ + F + T+EYTPR+I LE ++V+ +AG +HSAC D++G +Y FG ++ ++
Sbjct: 201 HGEMTGFFDFFKDTNEYTPRIIHCLEKLQVRSVSAGLVHSACADDSGTIYSFGQGSMCQL 260
Query: 271 LFQEGNHARRP--------------------SLISGGELYTWGSNENGCLGIGSIDVLHS 310
N A +P ++ G++YTWGSNE+GCLG G
Sbjct: 261 GLGNNNDASQPCPIPDLPRVSSISCGGYHTGAITQDGDIYTWGSNEHGCLGSG-FRASSK 319
Query: 311 PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
P R++ +E+ + ++SCGWKHTAAIS+G I +WGWGGS+GT++ SSGGQLG G D
Sbjct: 320 PLRLES-LAEAFMSEISCGWKHTAAISDGYIFSWGWGGSYGTYATQAESSGGQLGVGTDF 378
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
D+ P + + + AL VSCGFNHT A+LE +
Sbjct: 379 DFFEPVPIEMDDRLSALHVSCGFNHTAAILEEI 411
>gi|302784100|ref|XP_002973822.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
gi|300158154|gb|EFJ24777.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
Length = 413
Score = 343 bits (880), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 182/423 (43%), Positives = 254/423 (60%), Gaps = 36/423 (8%)
Query: 4 RSLTAMTKYY---LKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRW 60
RS+ + Y K ++L K G KRW+ ALWGNGD GRLGL S++
Sbjct: 2 RSVIKRRRAYGLTAKNKVELSGKAG--KRWV---------ALWGNGDQGRLGLSESGSQF 50
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
PV+C A E H +++CGGAHTL LT+ G V+ATGLN GQLG+ S +P+ + G
Sbjct: 51 EPVLCRALESHEPCSVSCGGAHTLILTDKGRVFATGLNSSGQLGVPLKRESSFDPVEVHG 110
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
V I+ G +HS+AIT GE Y+WG+NS GQLGLGK+A V P K+E L+G+ K
Sbjct: 111 FPDPCVHIAAGRYHSAAITSSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLK 170
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
ALG + S+ + G+VLSWG G LGHG+ + F + T+EYTPR+I LE +++
Sbjct: 171 ALALGTDHSLGLAETGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQI 230
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP------------------- 281
+ +AG +HSAC D++G +Y FG ++ ++ N A +P
Sbjct: 231 RSVSAGLVHSACADDSGTIYSFGQGSMCQLGLGNNNDASQPCPIPDLPRVSSISCGGYHT 290
Query: 282 -SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
++ G++YTWGSNE+GCLG G P R++ +E+ + ++SCGWKHTAAIS+G
Sbjct: 291 GAITQDGDIYTWGSNEHGCLGSG-FRASSKPLRLES-LAEAFMSEISCGWKHTAAISDGY 348
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
I +WGWGGS+GT++ SSGGQLG G D D+ P + + + AL VSCGFNHT A+L
Sbjct: 349 IFSWGWGGSYGTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHTAAIL 408
Query: 401 EYV 403
E +
Sbjct: 409 EEI 411
>gi|77551420|gb|ABA94217.1| uvb-resistance protein uvr8, possible, putative, expressed [Oryza
sativa Japonica Group]
Length = 362
Score = 330 bits (846), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 183/379 (48%), Positives = 229/379 (60%), Gaps = 61/379 (16%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF--------EKHSLKALACGGAHTLFLT 87
+RR AALWGNGDYGRLG+G+LESRW P C F + +LACGGAHT
Sbjct: 30 RRRVAALWGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHT---- 85
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
S EP+ +SG ++VV++S G HHS A+T
Sbjct: 86 ----------------------SSSPEPIEVSGFDEKVVEVSAGNHHSCAVT-------- 115
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
A KV+ P KV+CL+ K ALG E S+A T G+VLSWGA G+G
Sbjct: 116 ------------GAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEEGEVLSWGAAGAG 163
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG ++SILGF +TSEYTPRLIK L+GVK+K AAG LHSACIDE G ++IFG +
Sbjct: 164 RLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQK-T 222
Query: 268 DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSI----DVLHSPERVQGPFSESPV 323
+K+ F RP+++ ELY S I + D++ SPE ++ + PV
Sbjct: 223 EKVGFGRSGDELRPTVVE--ELYQCLSKLRMFAYIKFLTSGTDMVRSPEVLKSSLFKFPV 280
Query: 324 DQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 383
+VSCGWKHTA IS G I TWGWGG++GTF E+GHSSGGQLGHGNDVDY P +V FG+N
Sbjct: 281 SKVSCGWKHTAVISGGDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMVEFGKN 340
Query: 384 VKALQVSCGFNHTGALLEY 402
+A+ VSCGFNHTGA+ EY
Sbjct: 341 ARAVHVSCGFNHTGAIFEY 359
>gi|168024283|ref|XP_001764666.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684244|gb|EDQ70648.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 401
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 184/394 (46%), Positives = 235/394 (59%), Gaps = 29/394 (7%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
+ R+ ALWGNGDYGRLG S ES W P VC + + ALACGGAHTL LTE G VYA+
Sbjct: 7 KHRWVALWGNGDYGRLGQASGESFWEPTVCKSMQHLQPIALACGGAHTLVLTEEGRVYAS 66
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKKEV--VQISTGYHHSSAITVDGELYMWGKNSNG 153
GLND+GQLG+ + G+S+E L + GL E I+ G HS+AI+ DG +YMWG+N+ G
Sbjct: 67 GLNDWGQLGLPLSTGHSMEFLEVEGLPDEAKFTHIAAGDFHSAAISEDGRVYMWGRNTQG 126
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLGLGK+ + VE L + ALG E S+A++ G+VLSWG +GRLGHG+
Sbjct: 127 QLGLGKRGKGKVCAAQWVESLKDFRIQALALGAEHSLALSEEGEVLSWGTSLNGRLGHGE 186
Query: 214 ---ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
SS+ R +SEYTPRL+K VKV AAG HSAC+DE G ++ FG ++
Sbjct: 187 GHRSSSMFSIFRKSSEYTPRLVKGFRDVKVSKVAAGLTHSACLDEQGSLFTFGKGRECQL 246
Query: 271 LFQEGNHARRPSLIS--------------------GGELYTWGSNENGCLGIG--SIDVL 308
P + G+LY WGSNE GCLG G +
Sbjct: 247 GLGGDRDISEPKRVPVIPPVEEIACGGYHTGAISRNGQLYMWGSNEYGCLGFGYKHQNAT 306
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
P V+G V QV CGWKHT A++ +G + WGWGGS GT DG SSGGQLG G
Sbjct: 307 SLPMLVEGALESLRVTQVQCGWKHTMALTVDGDVFAWGWGGSQGTHGVDGLSSGGQLGLG 366
Query: 368 NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
N+ D++ PT V +N+KA+Q+SCGFNH+GA+LE
Sbjct: 367 NENDFLEPTQVK-SKNMKAIQISCGFNHSGAILE 399
>gi|413924972|gb|AFW64904.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 263
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 147/238 (61%), Positives = 180/238 (75%), Gaps = 9/238 (3%)
Query: 29 RWISSTL------QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACG 79
RW+SS ++R AALWGNGDYGRLGLGSLESRW P VC F + +LACG
Sbjct: 13 RWLSSDAASSKAPRQRVAALWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACG 72
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
GAHTLFLT+ G V+ATGLNDFGQLGI ++ + LEP+ ISG + VV++S G HHS A+T
Sbjct: 73 GAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVT 132
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
DG+L++WG+NS GQLGLGK A KV+ PTKV+CL+ + K ALG E S+AVT G+VL
Sbjct: 133 ADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVL 192
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
SWGA GSGRLGHG++SSILGF +++EYTPRLIK +G+K+K AAG LHSACIDE G
Sbjct: 193 SWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKG 250
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 57/237 (24%)
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG G GRLG G S R + P + +A G H+ + +NGRV+
Sbjct: 33 WGNGDYGRLGLGSLES-----RWSPTVCPFFLARAADPPASLACGG-AHTLFLTQNGRVF 86
Query: 261 IFG---------DRAVDKML-------FQE-------GNHARRPSLISGGELYTWGSNEN 297
G +V ML F E GNH ++ + G+L+ WG N
Sbjct: 87 ATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNH-HSCAVTADGKLFVWGRNSG 145
Query: 298 GCLGI--GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 354
G LG+ G+ V+ +P +V ++ V V+ G +H+ A++ EG++L+WG GS
Sbjct: 146 GQLGLGKGAGKVVSTPTKVDC-LTDLRVKTVALGSEHSIAVTEEGEVLSWGAAGS----- 199
Query: 355 EDGHSSGGQLGHGND----------VDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G+LGHG +Y I NF + +K +++ G H+ + E
Sbjct: 200 -------GRLGHGRQSSILGFSLTSTEYTPRLIKNF-DGIKIKKIAAGMLHSACIDE 248
>gi|413924969|gb|AFW64901.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 263
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 146/238 (61%), Positives = 179/238 (75%), Gaps = 9/238 (3%)
Query: 29 RWISSTL------QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACG 79
RW+SS ++R AALWGNGDYGRLGLGSLESRW P VC F + +LACG
Sbjct: 13 RWLSSDAASSKAPRQRVAALWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACG 72
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
GAHTLFLT+ G V+ATGLNDFGQLGI ++ + LEP+ ISG + VV++S G HHS A+T
Sbjct: 73 GAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVT 132
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
DG+L++WG+NS GQLGLGK A KV+ PTKV+CL+ + K ALG E S+AVT G+VL
Sbjct: 133 ADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVL 192
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
SWGA GSGRLGHG++SSILGF +++EYTPRLIK +G+K+K AAG LHSACID G
Sbjct: 193 SWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACIDGKG 250
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 100/235 (42%), Gaps = 57/235 (24%)
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG G GRLG G S R + P + +A G H+ + +NGRV+
Sbjct: 33 WGNGDYGRLGLGSLES-----RWSPTVCPFFLARAADPPASLACGG-AHTLFLTQNGRVF 86
Query: 261 IFG---------DRAVDKML-------FQE-------GNHARRPSLISGGELYTWGSNEN 297
G +V ML F E GNH ++ + G+L+ WG N
Sbjct: 87 ATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNH-HSCAVTADGKLFVWGRNSG 145
Query: 298 GCLGI--GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 354
G LG+ G+ V+ +P +V ++ V V+ G +H+ A++ EG++L+WG GS
Sbjct: 146 GQLGLGKGAGKVVSTPTKVDC-LTDLRVKTVALGSEHSIAVTEEGEVLSWGAAGS----- 199
Query: 355 EDGHSSGGQLGHG----------NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G+LGHG +Y I NF + +K +++ G H+ +
Sbjct: 200 -------GRLGHGRQSSILGFSLTSTEYTPRLIKNF-DGIKIKKIAAGMLHSACI 246
>gi|413924970|gb|AFW64902.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 261
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 145/235 (61%), Positives = 178/235 (75%), Gaps = 9/235 (3%)
Query: 29 RWISSTL------QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACG 79
RW+SS ++R AALWGNGDYGRLGLGSLESRW P VC F + +LACG
Sbjct: 13 RWLSSDAASSKAPRQRVAALWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACG 72
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
GAHTLFLT+ G V+ATGLNDFGQLGI ++ + LEP+ ISG + VV++S G HHS A+T
Sbjct: 73 GAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVT 132
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
DG+L++WG+NS GQLGLGK A KV+ PTKV+CL+ + K ALG E S+AVT G+VL
Sbjct: 133 ADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVL 192
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
SWGA GSGRLGHG++SSILGF +++EYTPRLIK +G+K+K AAG LHSACID
Sbjct: 193 SWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACID 247
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 100/235 (42%), Gaps = 57/235 (24%)
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG G GRLG G S R + P + +A G H+ + +NGRV+
Sbjct: 33 WGNGDYGRLGLGSLES-----RWSPTVCPFFLARAADPPASLACGG-AHTLFLTQNGRVF 86
Query: 261 IFG---------DRAVDKML-------FQE-------GNHARRPSLISGGELYTWGSNEN 297
G +V ML F E GNH ++ + G+L+ WG N
Sbjct: 87 ATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNH-HSCAVTADGKLFVWGRNSG 145
Query: 298 GCLGI--GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 354
G LG+ G+ V+ +P +V ++ V V+ G +H+ A++ EG++L+WG GS
Sbjct: 146 GQLGLGKGAGKVVSTPTKVDC-LTDLRVKTVALGSEHSIAVTEEGEVLSWGAAGS----- 199
Query: 355 EDGHSSGGQLGHGND----------VDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G+LGHG +Y I NF + +K +++ G H+ +
Sbjct: 200 -------GRLGHGRQSSILGFSLTSTEYTPRLIKNF-DGIKIKKIAAGMLHSACI 246
>gi|357464831|ref|XP_003602697.1| X-linked retinitis pigmentosa GTPase regulator [Medicago
truncatula]
gi|355491745|gb|AES72948.1| X-linked retinitis pigmentosa GTPase regulator [Medicago
truncatula]
Length = 244
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/208 (65%), Positives = 159/208 (76%), Gaps = 20/208 (9%)
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S I+ FL+S SEY+PRLIK+LEG+KVK AAG L SAC DENG V+IFGD+ +DK+L +
Sbjct: 36 SIIMYFLKSCSEYSPRLIKDLEGIKVKYVAAGMLTSACTDENGSVFIFGDKGIDKLLLKG 95
Query: 275 GNHARRPSLISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERV 314
++ +PSLIS GELYTWGSNENGCLGIGS +H PE+V
Sbjct: 96 TSNTTKPSLISELPYAEEVACGGYHTCVLTNFGELYTWGSNENGCLGIGSSYAIHLPEKV 155
Query: 315 QGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
QGPF ES V QVSCGWKHTAAIS G+I TWGWGGS+GTFS+DGHSSGGQLGHG+DVDYI+
Sbjct: 156 QGPFLESSVVQVSCGWKHTAAISGGRIFTWGWGGSNGTFSDDGHSSGGQLGHGSDVDYIN 215
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLEY 402
P+ V F E+VKALQVSCGFNHTGA+ EY
Sbjct: 216 PSRVCFAEDVKALQVSCGFNHTGAIFEY 243
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 33/214 (15%)
Query: 58 SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLR 117
S + P + E +K +A G + E G V+ G +L + + + +P
Sbjct: 46 SEYSPRLIKDLEGIKVKYVAAGMLTSACTDENGSVFIFGDKGIDKL-LLKGTSNTTKPSL 104
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
IS L +++ G +H+ +T GELY WG N NG LG+G A I +P KV+ G
Sbjct: 105 ISELPY-AEEVACGGYHTCVLTNFGELYTWGSNENGCLGIGSSYA--IHLPEKVQ---GP 158
Query: 178 FTK----QAALGFEQSVAVTGGGKVLSWGAGGS------------GRLGHGQESSILGFL 221
F + Q + G++ + A++ GG++ +WG GGS G+LGHG + +
Sbjct: 159 FLESSVVQVSCGWKHTAAIS-GGRIFTWGWGGSNGTFSDDGHSSGGQLGHGSDVDYI--- 214
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
P + E VK + GF H+ I E
Sbjct: 215 ------NPSRVCFAEDVKALQVSCGFNHTGAIFE 242
>gi|294463585|gb|ADE77321.1| unknown [Picea sitchensis]
Length = 243
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 130/239 (54%), Positives = 161/239 (67%), Gaps = 20/239 (8%)
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
ALG E S+A+T GKVLSWG G +GRLGHG +SS+ FL +SE+TP+LIK LEG+KV
Sbjct: 3 ALGSEHSLALTEDGKVLSWGLGENGRLGHGYQSSMFKFLEDSSEHTPKLIKYLEGIKVCK 62
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI------------------ 284
AAG LHS+CIDENG V+ FG + ++ + PS++
Sbjct: 63 IAAGLLHSSCIDENGTVFTFGQGRMYQLGLGHMKDSSVPSIVKDLPFVQQVACGGYHTCA 122
Query: 285 --SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKIL 342
S G+LYTWGS+ENGCLG+GS + SPERV+G V +VSCGWKHTA IS G +
Sbjct: 123 ISSSGDLYTWGSSENGCLGLGSKSLAPSPERVEGSLLPLHVSEVSCGWKHTAVISGGNVF 182
Query: 343 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
TWGWGGS+GTFS+DG SSGGQLG GND DY+ P+ V F N +ALQ+SCGFNHT A+ E
Sbjct: 183 TWGWGGSNGTFSDDGFSSGGQLGLGNDFDYLEPSRVQFDRNFQALQISCGFNHTAAIFE 241
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 106/235 (45%), Gaps = 36/235 (15%)
Query: 43 WGNGDYGRLGLGSLESRWR---------PVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WG G+ GRLG G S ++ P + E + +A G H+ + E G V+
Sbjct: 21 WGLGENGRLGHGYQSSMFKFLEDSSEHTPKLIKYLEGIKVCKIAAGLLHSSCIDENGTVF 80
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G QLG+ S+ P + L V Q++ G +H+ AI+ G+LY WG + NG
Sbjct: 81 TFGQGRMYQLGLGHMKDSSV-PSIVKDLPF-VQQVACGGYHTCAISSSGDLYTWGSSENG 138
Query: 154 QLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS------ 206
LGLG K+ + P P +VE L + + + G++ + AV GG V +WG GGS
Sbjct: 139 CLGLGSKS--LAPSPERVEGSLLPLHVSEVSCGWKHT-AVISGGNVFTWGWGGSNGTFSD 195
Query: 207 ------GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+LG G + L P ++ + + GF H+A I E
Sbjct: 196 DGFSSGGQLGLGNDFDYL---------EPSRVQFDRNFQALQISCGFNHTAAIFE 241
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 126/272 (46%), Gaps = 41/272 (15%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLE------PLRISGLKK-EVV 126
+A G H+L LTE G V + GL + G+L G ++ LE P I L+ +V
Sbjct: 2 IALGSEHSLALTEDGKVLSWGLGENGRLGHGYQSSMFKFLEDSSEHTPKLIKYLEGIKVC 61
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
+I+ G HSS I +G ++ +G+ QLGLG K +P+ V+ L F +Q A G
Sbjct: 62 KIAAGLLHSSCIDENGTVFTFGQGRMYQLGLGH--MKDSSVPSIVKDLP--FVQQVACGG 117
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+ A++ G + +WG+ +G LG G +S + R+ L + V + G
Sbjct: 118 YHTCAISSSGDLYTWGSSENGCLGLGS--------KSLAPSPERVEGSLLPLHVSEVSCG 169
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSID 306
+ H+A I G V+ +G + +G SGG+ LG+G+
Sbjct: 170 WKHTAVI-SGGNVFTWGWGGSNGTFSDDG-------FSSGGQ-----------LGLGNDF 210
Query: 307 VLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
P RVQ + + Q+SCG+ HTAAI E
Sbjct: 211 DYLEPSRVQFDRNFQAL-QISCGFNHTAAIFE 241
>gi|307106099|gb|EFN54346.1| hypothetical protein CHLNCDRAFT_24715 [Chlorella variabilis]
Length = 393
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 150/396 (37%), Positives = 212/396 (53%), Gaps = 42/396 (10%)
Query: 37 RRFAALWGNGDYGRLGLGSLE--SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
RR A +GNGD GRLG SLE S P V A LKA+ACGGAHT + ++G VY
Sbjct: 2 RRVLATFGNGDCGRLGH-SLEYASEELPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYT 60
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
GLND GQLG P ++ + + VV +S GY+H+ + G ++ +G N GQ
Sbjct: 61 WGLNDKGQLGHDSEDSEVGLPGEVA-MPERVVALSAGYYHTLCVGESGSVWSFGCNGKGQ 119
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LGLGK ++ P V+ L A G E S+A+T GG+V SWG +GRLGHG
Sbjct: 120 LGLGKDVV-LVREPRLVKSLQDNKVVAVAAGMEHSLALTAGGEVYSWGNAANGRLGHGSA 178
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ F S+ E+ PRL++ E ++V+ +AG +HSA + G +++G ++ F
Sbjct: 179 TPRRLF-GSSIEFLPRLVRAFEALRVEQVSAGQMHSAAVSTAGDAFLWGYGKFHQLGFGS 237
Query: 275 GNHARRPSLIS---------------------GGELYTWGSNENGCLGIGSIDVLHSPER 313
P+++ GG + WG+N+NG LG G E+
Sbjct: 238 DEDLAGPTVLPPLKGSTAAVACGSLHSLALQYGGHVLAWGTNQNGVLGQGH-------EK 290
Query: 314 VQGPFSESPV-----DQVSCGWKHTAAIS-EGKILTWGWGGSHGT-FSEDGHS-SGGQLG 365
Q P S V +Q++ GWKH+AA++ GK+ TWGWGGS GT S +G + +GGQLG
Sbjct: 291 QQQPKRPSKVPGVSAEQIAAGWKHSAAVTGSGKLYTWGWGGSQGTALSFEGRTGTGGQLG 350
Query: 366 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
HGND DY P V++ + V+CG NHT A++E
Sbjct: 351 HGNDFDYWSPHHVDWLSLTETDLVACGMNHTAAIVE 386
>gi|145345400|ref|XP_001417200.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577427|gb|ABO95493.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 418
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 147/405 (36%), Positives = 216/405 (53%), Gaps = 40/405 (9%)
Query: 31 ISSTLQRRFAAL-WGNGDYGRLGLGSLESR---WRPVVCSAFE------KHSLKALACGG 80
+ + +R + AL GNGD+GRLG GS + W P + F ++A+A GG
Sbjct: 17 VLTQYRREYIALSAGNGDHGRLGHGSPDEAHDGWSPRSSNYFHPVEGVSDLDVRAVAAGG 76
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
AH++FL G V+ GLN GQLG S + +S EP+ + L EVV ++ G H+ + V
Sbjct: 77 AHSVFLVAGGHVFTCGLNADGQLGHSAGLPFSPEPMLVR-LDVEVVSVAAGNGHTLCVDV 135
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG-IFTKQAALGFEQSVAVTGGGKVL 199
DG ++ +GKN+ GQLG G IP K+ L+ Q A G E S+AV G+V
Sbjct: 136 DGCVWAFGKNTAGQLGTGNVDGT---IPRKIGALAKEARVAQVACGAEHSLAVADDGRVY 192
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTS--EYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
SWG+ G LGHG E+ G+ T+ E PRL++ LE KV AAG +HSACID+ G
Sbjct: 193 SWGSSTDGVLGHGSETWNDGWFYRTARAELAPRLVRSLEDKKVVAVAAGHMHSACIDDRG 252
Query: 258 RVYIFGDRAVDKMLF--QEGNHARRPSLI-------------------SGGELYTWGSNE 296
+Y +G +++ + +H PS + + + +WG+N+
Sbjct: 253 NLYTWGQGRFNQLGLSAKPSDHETTPSPVMSLRFVHEIACGGLHSLANTNAGVVSWGANQ 312
Query: 297 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 356
+G LG G + S +++ GWKH+A I+ GK+ WG+GGS G+++++
Sbjct: 313 HGELGHGHHSDIKSAVPKPIKMGSRGWSKLAAGWKHSAGIANGKLFAWGFGGSMGSYADE 372
Query: 357 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
SSGGQLG GN+ D+ P V+ VK VSCGFNHT AL++
Sbjct: 373 KMSSGGQLGLGNEFDFWEPHEVSVPGEVK--DVSCGFNHTLALVD 415
>gi|384247688|gb|EIE21174.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 367
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 198/373 (53%), Gaps = 36/373 (9%)
Query: 35 LQRRF---AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
+ RR A WGNGDYGRLG +S P + A ++ACGGAHT + G
Sbjct: 1 MARRLIGKVACWGNGDYGRLGHDCAKSLAVPSLVPALINQKFLSVACGGAHTAAVAVDGS 60
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND GQLG + +S++ + L + VQ++ G+ H+ +T ++ G N
Sbjct: 61 VFTWGLNDHGQLGHYTHQEFSMQEPQEVFLPEAAVQVAMGHSHTLFLTESSSVWAVGSNM 120
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+GQLGL ++ + +P +V+ L G A G + S+AV+ G++ +WG G LGH
Sbjct: 121 HGQLGLRRRGGQEW-VPRRVQDLVGTKIIGIAAGAQHSLAVSADGELFTWGGDTRGCLGH 179
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G+ S F + E PRL+K+L+G+ V+ AA G ++S C+D NG Y +G L
Sbjct: 180 GRSS----FAATQDESAPRLVKKLKGIMVQSAAGGLMNSGCVDANGAAYFWGPYLRQSPL 235
Query: 272 FQEGNHARRPSLIS--------------------GGELYTWGSNENGCLGIGSIDVLHSP 311
+ A P ++S GG + T+G++E G LG+GS D P
Sbjct: 236 TKAATEANEPEVLSGVQNVKQLALGGRHLVALTHGGRVATYGTSEYGLLGLGSSD---PP 292
Query: 312 ERVQGPF-SESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFS---EDGHSSGGQLGH 366
Q + ++QV+ GW+H+A + S+G++LTWGWGGS G+ S D S+GGQLGH
Sbjct: 293 SPFQPTLIPDVSLEQVAAGWQHSAGVTSDGQLLTWGWGGSVGSESGLFPDQTSAGGQLGH 352
Query: 367 GNDVDYIHPTIVN 379
N+ DY PT N
Sbjct: 353 DNEFDYWKPTPGN 365
>gi|255085030|ref|XP_002504946.1| predicted protein [Micromonas sp. RCC299]
gi|226520215|gb|ACO66204.1| predicted protein [Micromonas sp. RCC299]
Length = 526
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 153/408 (37%), Positives = 210/408 (51%), Gaps = 54/408 (13%)
Query: 44 GNGDYGRLGLGSLESRWRP---VVCSAFEKHS-------LKALACGGAHTLFLTETGCVY 93
GNGD+GRLG G + R R + F++ + + + + GG+HT +T G VY
Sbjct: 121 GNGDFGRLGHGG-DGRGRAGLGMSAETFQRMTGIPQGLDVVSASAGGSHTAVVTADGAVY 179
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNS 151
GLN+ GQLG S + GY +SGL + VV +S G+HH+ +T GEL+ WG+N
Sbjct: 180 TCGLNEHGQLGHSHDAGYVPILRPVSGLPQHDRVVAVSAGHHHTVCVTEGGELWAWGRND 239
Query: 152 NGQLGLGKKAAKVIPIPTKVECLS-------GIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
Q GLG A V+P+P + S G AA G ++AVT G V +WG G
Sbjct: 240 ASQCGLGSGAPSVVPLPAWISSASPGAPGNHGAVMSVAA-GPRHNLAVTDRGAVYTWGDG 298
Query: 205 GSGRLGHG-QESSILGFL-RSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVY 260
G LGHG ES GF R T+E PRL++ L +G++V AAAG HS C+D G V+
Sbjct: 299 KEGVLGHGADESWRWGFWGRDTTEPAPRLVRSLADDGIEVASAAAGLCHSVCVDRTGHVH 358
Query: 261 IFGDRAVDKMLFQEGN-------HARRPSL----------------ISGGELYTWGSNEN 297
+G +++ N R P+L + G + +WG+N N
Sbjct: 359 AWGQGRFNQLGVGAKNAPAFTTEPTRVPALGRVRDLAAGGNFNVAVGADGSMISWGANGN 418
Query: 298 GCLGIGSIDVLHS--PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFS 354
G LG+G+ + P V P + + S GW+H AA S+G++ TWGW GS G
Sbjct: 419 GELGLGNSNDKRGDVPRLVHNP-NAASFASASAGWRHAAATSSDGRLWTWGWSGSVGQHG 477
Query: 355 EDGHSSGGQLGHGN-DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
D S+GGQLG N D+ PT+V G KA VSCGFNHT A+LE
Sbjct: 478 VDADSTGGQLGLRNGQSDFWEPTLV-VGLPGKAKAVSCGFNHTVAVLE 524
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 103/243 (42%), Gaps = 31/243 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVC-------SAFEKH-SLKALACGGAHTLFLTETGCVYA 94
WG D + GLGS P+ A H ++ ++A G H L +T+ G VY
Sbjct: 235 WGRNDASQCGLGSGAPSVVPLPAWISSASPGAPGNHGAVMSVAAGPRHNLAVTDRGAVYT 294
Query: 95 TGLNDFGQLGISENIGY----------SLEPLRISGLKK---EVVQISTGYHHSSAITVD 141
G G LG + + P + L EV + G HS +
Sbjct: 295 WGDGKEGVLGHGADESWRWGFWGRDTTEPAPRLVRSLADDGIEVASAAAGLCHSVCVDRT 354
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G ++ WG+ QLG+G K A PT+V L + + A G +VAV G ++S
Sbjct: 355 GHVHAWGQGRFNQLGVGAKNAPAFTTEPTRVPALGRV--RDLAAGGNFNVAVGADGSMIS 412
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WGA G+G LG G + G + PRL+ A+AG+ H+A +GR++
Sbjct: 413 WGANGNGELGLGNSNDKRGDV-------PRLVHNPNAASFASASAGWRHAAATSSDGRLW 465
Query: 261 IFG 263
+G
Sbjct: 466 TWG 468
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 89/208 (42%), Gaps = 44/208 (21%)
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+V+S G G GRLGHG + L ++E R+ +G+ V A+AG H+A + +
Sbjct: 116 RVVSCGNGDFGRLGHGGDGRGRAGLGMSAETFQRMTGIPQGLDVVSASAGGSHTAVVTAD 175
Query: 257 GRVYIFG------------------DRAV------DKMLFQEGNHARRPSLISGGELYTW 292
G VY G R V D+++ H + GGEL+ W
Sbjct: 176 GAVYTCGLNEHGQLGHSHDAGYVPILRPVSGLPQHDRVVAVSAGHHHTVCVTEGGELWAW 235
Query: 293 GSNE-NGC-LGIGSIDVLHSPERVQ-----GPFSESPVDQVSCGWKHTAAISE-GKILTW 344
G N+ + C LG G+ V+ P + P + V V+ G +H A+++ G + TW
Sbjct: 236 GRNDASQCGLGSGAPSVVPLPAWISSASPGAPGNHGAVMSVAAGPRHNLAVTDRGAVYTW 295
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
G DG G LGHG D +
Sbjct: 296 G----------DGKE--GVLGHGADESW 311
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 21/167 (12%)
Query: 43 WGNGDYGRLGLGSLES---RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG G + +LG+G+ + P A + ++ LA GG + + G + + G N
Sbjct: 360 WGQGRFNQLGVGAKNAPAFTTEPTRVPALGR--VRDLAAGGNFNVAVGADGSMISWGANG 417
Query: 100 FGQLGISENIGYSLEPLRI--SGLKKEVVQISTGYHHSSAITVDGELYMWG--------- 148
G+LG+ + + R+ + S G+ H++A + DG L+ WG
Sbjct: 418 NGELGLGNSNDKRGDVPRLVHNPNAASFASASAGWRHAAATSSDGRLWTWGWSGSVGQHG 477
Query: 149 ---KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
++ GQLGL + PT V L G K + GF +VAV
Sbjct: 478 VDADSTGGQLGL-RNGQSDFWEPTLVVGLPGK-AKAVSCGFNHTVAV 522
>gi|308802742|ref|XP_003078684.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
gi|116057137|emb|CAL51564.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
Length = 419
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 145/401 (36%), Positives = 212/401 (52%), Gaps = 37/401 (9%)
Query: 34 TLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--------ACGGAHTL 84
+ R F AL GNGD+GRLG G + + S+ H ++ L A GGAH++
Sbjct: 20 STSRAFTALSAGNGDFGRLGHGQVLTDDDVSFRSSNYFHPVRGLEDVDVTQCAAGGAHSI 79
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
FL G V+A GLN++GQLG ++ + E + L EVV+++ G +H+ + VDG +
Sbjct: 80 FLAHGGFVFACGLNNYGQLGHGKHSAHVPEAALVD-LDVEVVRVAAGNNHTLCVDVDGGV 138
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ +GKN GQLG G P + L G A+ G E S+A++ +V SWG
Sbjct: 139 WAFGKNEGGQLGTGLDLDGFQPRRIETLALEGKIVDVAS-GAEHSLALSEDARVYSWGTS 197
Query: 205 GSGRLGHGQESSILGFLRSTSEYT--PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G LGHG E+ G+ T++ PRL++ L KV+ AAG +HSAC+DE G ++ +
Sbjct: 198 ADGVLGHGSETWNEGWFYRTAKTVAKPRLLRALSETKVRSIAAGHMHSACVDERGELFTW 257
Query: 263 GDRAVDKM--LFQEGNHARRPS---------LISGGELYT----------WGSNENGCLG 301
G +++ + +H P ++ G L+T WG+N++G LG
Sbjct: 258 GQGRFNQLGQTSKYVDHETAPKSVDTLRFVHQVTCGGLHTLASTSAGVVSWGANQHGELG 317
Query: 302 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 360
GS S S ++S GWKH+A +S +GK+ WG+GGS G+ S++ SS
Sbjct: 318 HGSNSDAKSAIPKPIKLSSRGWSKLSAGWKHSAGVSNDGKLFAWGFGGSVGSHSDEKLSS 377
Query: 361 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GGQLG GND DY PT V + A+ VSCGFNHT AL+
Sbjct: 378 GGQLGLGNDFDYWEPTEVWLPGD--AVGVSCGFNHTLALVR 416
>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 420
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 128/363 (35%), Positives = 177/363 (48%), Gaps = 50/363 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE-TGCVYATGLNDFG 101
WG G+ G+LG G E R P+V SA + + ++ CG HT +E T VY+ G DFG
Sbjct: 38 WGRGEDGQLGHGDAEERHLPLVISALDDCEISSITCGADHTTARSESTRTVYSWGWGDFG 97
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N P I GLK E+ QI+ G H AIT DGE++ WG+N NGQLGLG
Sbjct: 98 RLG-HGNSSDLFIPRAIKGLKGLEIKQIACGDSHCLAITGDGEVHSWGRNQNGQLGLGH- 155
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ + +P KV GI K A G E + AVT GK+ WG G G LG G + L
Sbjct: 156 -TEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTESGKLYGWGWGRYGNLGLGDRNDRL-- 212
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRAV 267
P + + G K+ + A G+ H+ + +G +Y FG D V
Sbjct: 213 -------VPGEVAAVPGEKMNLVACGWRHTIAVANSGNLYTFGWSKYGQLGHGDFEDHLV 265
Query: 268 DKMLFQEGNHARRP---------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
+ N + +L GELY WG N+ G +G G+ D +SP+ + G
Sbjct: 266 PHQVQALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFGQVGCGNTDDHNSPKLITGIV 325
Query: 319 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 377
+E V +V+CGW+HT AI++ G + +WG G S GQLGHG+ VD P
Sbjct: 326 NEK-VTRVTCGWRHTVAITDRGNVYSWGRGTS------------GQLGHGDAVDRCVPKR 372
Query: 378 VNF 380
+
Sbjct: 373 IEL 375
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 170/364 (46%), Gaps = 50/364 (13%)
Query: 63 VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK 122
CS + + +++ G +HT+ L V + G + GQLG + L PL IS L
Sbjct: 6 AACSGGPRRRVISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHL-PLVISALD 64
Query: 123 K-EVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
E+ I+ G H++A + +Y WG G+LG G + + IP ++ L G+ K
Sbjct: 65 DCEISSITCGADHTTARSESTRTVYSWGWGDFGRLGHGNSSD--LFIPRAIKGLKGLEIK 122
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q A G +A+TG G+V SWG +G+LG G +L P + EG+ V
Sbjct: 123 QIACGDSHCLAITGDGEVHSWGRNQNGQLGLGHTEDVL---------VPNKVAAFEGIAV 173
Query: 241 KIAAAGFLHSACIDENGRVYIFG-------------DRAV---------DKMLFQEGNHA 278
K+ AAG H+A + E+G++Y +G DR V +KM
Sbjct: 174 KMLAAGAEHTAAVTESGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACGWR 233
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
++ + G LYT+G ++ G LG G + P +VQ + VS GW+HT A+ E
Sbjct: 234 HTIAVANSGNLYTFGWSKYGQLGHGDFEDHLVPHQVQA-LKNKTIQAVSGGWRHTVALDE 292
Query: 339 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
G++ WGW + GQ+G GN D+ P ++ N K +V+CG+ HT
Sbjct: 293 DGELYGWGW------------NKFGQVGCGNTDDHNSPKLITGIVNEKVTRVTCGWRHTV 340
Query: 398 ALLE 401
A+ +
Sbjct: 341 AITD 344
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 70/128 (54%), Gaps = 2/128 (1%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G E P A + +++A++ G HT+ L E G +Y G N FGQ+G
Sbjct: 252 YGQLGHGDFEDHLVPHQVQALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFGQVGCGN 311
Query: 108 NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
++ L + ++V +++ G+ H+ AIT G +Y WG+ ++GQLG G + +
Sbjct: 312 TDDHNSPKLITGIVNEKVTRVTCGWRHTVAITDRGNVYSWGRGTSGQLGHGDAVDRC--V 369
Query: 168 PTKVECLS 175
P ++E LS
Sbjct: 370 PKRIELLS 377
>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 545
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/383 (30%), Positives = 190/383 (49%), Gaps = 50/383 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LGLG ++ P++ A + ++CG HT+ LT+ G VY G D G+
Sbjct: 6 WGRGEDGQLGLGDTSDQYHPILVEALQDRQTVQISCGSGHTVVLTDDGKVYTWGRGDDGR 65
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG +N G+ P + L+ K+V Q++ G +H++A+TV GELY WG G+LG G +
Sbjct: 66 LGHGDN-GWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLGHGNEN 124
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P+ VE + G++ +Q A G +V + V +WG +G GHG S
Sbjct: 125 GH--STPSLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKENGVSGHGDTSG----- 177
Query: 222 RSTSEYTPRLIKELEGVKVK-IAAAGFLHSACIDENGRVYIFGD---------------- 264
+Y+P + EL + +K I+A GF H+A + ENG+V+ FG+
Sbjct: 178 ---HQYSPYCVSELVEINIKQISACGF-HTAALSENGQVFTFGEGKFGRLGHNSERNQPV 233
Query: 265 -RAVDKMLFQEGNHA-----RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
+ +D ++ + ++ G ++TWG E+G LG G P RV+
Sbjct: 234 AKCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDKVNQIIPTRVESLI 293
Query: 319 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 377
++ + Q++CGW HT A+++ G++ TWG G H G+LGH + P +
Sbjct: 294 DKNII-QLTCGWSHTVALTDKGEVFTWG-NGDH-----------GKLGHNDTNKVTEPKL 340
Query: 378 VNFGENVKALQVSCGFNHTGALL 400
+ + + + V+ HT AL+
Sbjct: 341 IETFNSKRVISVASYNEHTVALV 363
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 140/334 (41%), Gaps = 100/334 (29%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG+ +GQLGLG + + PI VE L T Q + G +V +T GKV +WG
Sbjct: 3 VYTWGRGEDGQLGLGDTSDQYHPIL--VEALQDRQTVQISCGSGHTVVLTDDGKVYTWGR 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G GRLGHG ++ PRL+++L KV+ G H+A + +G +Y +G
Sbjct: 61 GDDGRLGHGDNG---------WKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWG 111
Query: 264 DRAVDKMLFQEGNHARRPSLI----------------------SGGELYTWGSNENGCLG 301
K+ N PSL+ ++YTWG ENG G
Sbjct: 112 GGMYGKLGHGNENGHSTPSLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKENGVSG 171
Query: 302 IGS----------------IDVL------------------------------HSPERVQ 315
G I++ H+ ER Q
Sbjct: 172 HGDTSGHQYSPYCVSELVEINIKQISACGFHTAALSENGQVFTFGEGKFGRLGHNSERNQ 231
Query: 316 GPFSE-------SPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
P ++ + QV+CG HTAA++E G + TWG GG H GQLGHG
Sbjct: 232 -PVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFTWG-GGEH-----------GQLGHG 278
Query: 368 NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ V+ I PT V + +Q++CG++HT AL +
Sbjct: 279 DKVNQIIPTRVESLIDKNIIQLTCGWSHTVALTD 312
>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
Length = 545
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/386 (32%), Positives = 186/386 (48%), Gaps = 50/386 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LGLG + RPV A + + +ACG HT+ LT+ G VY G D G+
Sbjct: 6 WGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWGRGDDGR 65
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG +N G+ P + L+ K + Q++ G +H++A+TV G+LY WG G+LG G +
Sbjct: 66 LGHGDN-GWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNET 124
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P VE L G+ +Q A G +V + V +WG +G GHG
Sbjct: 125 GHSTPF--LVETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEG----- 177
Query: 222 RSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFG-----------DRAVDK 269
+Y P ++EL G V+I+A GF H+A + E G V+ FG +R
Sbjct: 178 ---HQYLPCPVEELRGKNIVQISACGF-HTAALSEFGEVFTFGEGKFGRLGHNSERNQPV 233
Query: 270 MLFQEGNHARR-----------PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
F E +R ++ GE+YTWG E+G LG G P RV+
Sbjct: 234 ARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVE-SL 292
Query: 319 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 377
E V Q++CGW HT A+++ G++ TWG G H G+LGH + P +
Sbjct: 293 VEKLVVQITCGWSHTVALTDTGEVYTWG-NGDH-----------GKLGHNDTTKVTLPKL 340
Query: 378 VNFGENVKALQVSCGFNHTGALLEYV 403
V+ E + + V+ HT AL++ V
Sbjct: 341 VDVLEGKRVISVASYNEHTVALVDPV 366
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 143/333 (42%), Gaps = 98/333 (29%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG+ +GQLGLG + + P+P ++ L+ Q A G +V +T G+V +WG
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQHRPVP--IDALAERRIVQIACGSGHTVVLTDEGEVYTWGR 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G GRLGHG ++ PRL++EL G ++ G H+A + +G +Y +G
Sbjct: 61 GDDGRLGHGDNG---------WKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWG 111
Query: 264 DRAVDKM------------LFQ--EGNHARRPS--------LISGGELYTWGSNENGCLG 301
K+ L + +G R+ + L+ ++YTWG ENG G
Sbjct: 112 GGMYGKLGHGNETGHSTPFLVETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSG 171
Query: 302 IGSID----------------------------------------------VLHSPERVQ 315
G + + H+ ER Q
Sbjct: 172 HGDTEGHQYLPCPVEELRGKNIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQ 231
Query: 316 --GPFSES----PVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
F E+ V QV+CG HTAA++E G++ TWG GG H GQLGHG+
Sbjct: 232 PVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWG-GGEH-----------GQLGHGD 279
Query: 369 DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
V+ PT V +Q++CG++HT AL +
Sbjct: 280 KVNKTVPTRVESLVEKLVVQITCGWSHTVALTD 312
>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
Length = 440
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 174/362 (48%), Gaps = 58/362 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT+ +++G VY+ G DFG
Sbjct: 39 WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 98
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 99 RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 157
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G + WG G G LG G
Sbjct: 158 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 209
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T P + G K+ + A G+ H+ + +
Sbjct: 210 ---TDRLVPERVTSTGGEKMSMVACGWRHTISVSYS------------------------ 242
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEG 339
G LYT+G ++ G LG G ++ P +++ S S + Q+S GW+HT A+ S+G
Sbjct: 243 ------GALYTYGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQISGGWRHTMALTSDG 295
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
K+ WGW + GQ+G GN++D P V F ++ K +QVSCG+ HT A+
Sbjct: 296 KLYGWGW------------NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 343
Query: 400 LE 401
E
Sbjct: 344 TE 345
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 16/213 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG R P ++ + +ACG HT+ ++ +G +Y G + +GQ
Sbjct: 196 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQ 255
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + L P ++ L + QIS G+ H+ A+T DG+LY WG N GQ+G+G
Sbjct: 256 LGHGD-LEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ + + Q + G+ ++AVT V +WG G +G+LG G+
Sbjct: 315 DQCSPVQVRFPDDQKVV--QVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGE-------- 364
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
S P++I E + V A+ + S+ ID
Sbjct: 365 -SVDRNFPKII---EALSVDGASGQHIESSNID 393
>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
Length = 406
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 174/362 (48%), Gaps = 58/362 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT+ +++G VY+ G DFG
Sbjct: 40 WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 99
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 100 RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 158
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G + WG G G LG G
Sbjct: 159 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 210
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T P + G K+ + A G+ H+ + +
Sbjct: 211 ---TDRLVPERVTSTGGEKMSMVACGWRHTISVSYS------------------------ 243
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEG 339
G LYT+G ++ G LG G ++ P +++ S S + Q+S GW+HT A+ S+G
Sbjct: 244 ------GALYTYGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQISGGWRHTMALTSDG 296
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
K+ WGW + GQ+G GN++D P V F ++ K +QVSCG+ HT A+
Sbjct: 297 KLYGWGW------------NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 344
Query: 400 LE 401
E
Sbjct: 345 TE 346
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 16/213 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG R P ++ + +ACG HT+ ++ +G +Y G + +GQ
Sbjct: 197 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQ 256
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + L P ++ L + QIS G+ H+ A+T DG+LY WG N GQ+G+G
Sbjct: 257 LGHGD-LEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 315
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ + + Q + G+ ++AVT V +WG G +G+LG G+
Sbjct: 316 DQCSPVQVRFPDDQKVV--QVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGE-------- 365
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
S P++I E + V A+ + S+ ID
Sbjct: 366 -SVDRNFPKII---EALSVDGASGQHIESSNID 394
>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
Length = 440
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 174/362 (48%), Gaps = 58/362 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT+ +++G VY+ G DFG
Sbjct: 39 WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 98
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 99 RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 157
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G + WG G G LG G
Sbjct: 158 EDSL--VPQKIQAFEGIPIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 209
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T P + G K+ + A G+ H+ + +
Sbjct: 210 ---TDRLVPERVTSTGGEKMSMVACGWRHTISVSYS------------------------ 242
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEG 339
G LYT+G ++ G LG G ++ P +++ S S + Q+S GW+HT A+ S+G
Sbjct: 243 ------GALYTYGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQISGGWRHTMALTSDG 295
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
K+ WGW + GQ+G GN++D P V F ++ K +QVSCG+ HT A+
Sbjct: 296 KLYGWGW------------NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 343
Query: 400 LE 401
E
Sbjct: 344 TE 345
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 16/213 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG R P ++ + +ACG HT+ ++ +G +Y G + +GQ
Sbjct: 196 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQ 255
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + L P ++ L + QIS G+ H+ A+T DG+LY WG N GQ+G+G
Sbjct: 256 LGHGD-LEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ + + Q + G+ ++AVT V +WG G +G+LG G+
Sbjct: 315 DQCSPVQVRFPDDQKVV--QVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGE-------- 364
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
S P++I E + V A+ + S+ ID
Sbjct: 365 -SVDRNFPKII---EALSVDGASGQHIESSNID 393
>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
Length = 374
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 174/362 (48%), Gaps = 58/362 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT+ +++G VY+ G DFG
Sbjct: 28 WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 87
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 88 RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 146
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G + WG G G LG G
Sbjct: 147 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 198
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T P + G K+ + A G+ H+ + +
Sbjct: 199 ---TDRLVPERVTSTGGEKMSMVACGWRHTISVSYS------------------------ 231
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEG 339
G LYT+G ++ G LG G ++ P +++ S S + Q+S GW+HT A+ S+G
Sbjct: 232 ------GALYTYGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQISGGWRHTMALTSDG 284
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
K+ WGW + GQ+G GN++D P V F ++ K +QVSCG+ HT A+
Sbjct: 285 KLYGWGW------------NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 332
Query: 400 LE 401
E
Sbjct: 333 TE 334
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 13/194 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG R P ++ + +ACG HT+ ++ +G +Y G + +GQ
Sbjct: 185 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQ 244
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + L P ++ L + QIS G+ H+ A+T DG+LY WG N GQ+G+G
Sbjct: 245 LGHGD-LEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 303
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ + + Q + G+ ++AVT V +WG G +G+LG G+
Sbjct: 304 DQCSPVQVRFPDDQKVV--QVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGE-------- 353
Query: 222 RSTSEYTPRLIKEL 235
S P++I+ L
Sbjct: 354 -SVDRNFPKIIEAL 366
>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
vinifera]
gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/363 (32%), Positives = 181/363 (49%), Gaps = 60/363 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT +E+ VY+ G DFG
Sbjct: 40 WGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTAYSESFTQVYSWGWGDFG 99
Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG + ++ +P++ + GL+ + QI+ G H A+T+DGE+ WG+N NGQLGLG
Sbjct: 100 RLGHGNSSDLFTPQPIKALHGLR--IKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGT 157
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ G+ K A G E + AVT G++ WG G G LG G + L
Sbjct: 158 TEDSL--VPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRL- 214
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P + +EGVK+ A G+ H+
Sbjct: 215 --------VPEKVSTVEGVKMVKVACGWRHTI---------------------------- 238
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SE 338
S+ S G LYT+G ++ G LG G + +P +++ E+ + ++S GW+HT A+ S+
Sbjct: 239 --SVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEA-LQENLISEISGGWRHTMALTSD 295
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
GK+ WGW + GQ+G G++VD+ P V F K + +SCG+ HT A
Sbjct: 296 GKLYGWGW------------NKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLA 343
Query: 399 LLE 401
+ E
Sbjct: 344 VTE 346
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 74/129 (57%), Gaps = 4/129 (3%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G E P A +++ + ++ G HT+ LT G +Y G N FGQ+G+ +
Sbjct: 254 YGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGD 313
Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N+ + P+++ +++VV IS G+ H+ A+T ++ WG+ +NGQLG G+ +
Sbjct: 314 NVDH-CSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDR--N 370
Query: 167 IPTKVECLS 175
IP +E LS
Sbjct: 371 IPKMIEVLS 379
>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
Length = 440
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 175/362 (48%), Gaps = 58/362 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT+ +++G VY+ G DFG
Sbjct: 39 WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 98
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 99 RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 157
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G + WG G G LG G + L
Sbjct: 158 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL-- 213
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P + G K+ + A G+ H+ + +
Sbjct: 214 -------VPERVTSAGGEKMSMVACGWRHTISVSYS------------------------ 242
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEG 339
G LYT+G ++ G LG G ++ P +++ S S + Q+S GW+HT A+ S+G
Sbjct: 243 ------GALYTYGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQISGGWRHTMALTSDG 295
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
K+ WGW + GQ+G GN++D P V F ++ K +QVSCG+ HT A+
Sbjct: 296 KLYGWGW------------NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 343
Query: 400 LE 401
E
Sbjct: 344 TE 345
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 16/213 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG R P ++ + +ACG HT+ ++ +G +Y G + +GQ
Sbjct: 196 WGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQ 255
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + L P ++ L + QIS G+ H+ A+T DG+LY WG N GQ+G+G
Sbjct: 256 LGHGD-LEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ + + Q + G+ ++AVT V +WG G +G+LG G+
Sbjct: 315 DQCSPVQVRFPDDQKVV--QVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGE-------- 364
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
S P++I E + V A+ + S+ ID
Sbjct: 365 -SVDRNFPKII---EALSVDGASGQHIESSNID 393
>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/363 (34%), Positives = 171/363 (47%), Gaps = 50/363 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE-TGCVYATGLNDFG 101
WG G+ G+LG G E R P + SA + + ++ CG HT L+ T VY+ G DFG
Sbjct: 38 WGRGEDGQLGHGDAEERHFPTIVSALDDCEISSVTCGADHTTALSNSTKTVYSWGWGDFG 97
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N P I LK EV QI+ G H AIT DGE+ WG+N NGQLGLG
Sbjct: 98 RLGHG-NSSDLFIPQPIKALKGLEVKQIACGDSHCLAITTDGEVLGWGRNQNGQLGLGH- 155
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ + P K+ G+ K A G E + AVT GK+ WG G G LG G L
Sbjct: 156 -TEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTENGKLYGWGWGRYGNLGLGDREDRL-- 212
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRAV 267
P + + G +K+ A G+ H+ C+ E+G +Y FG D +
Sbjct: 213 -------VPDQVAAVAGELMKMVACGWRHTICVAESGNMYTFGWSKYGQLGHGDFADHLI 265
Query: 268 ---------DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
K+ G +L S G LY WG N+ G +G G+ + SP+ V+G
Sbjct: 266 PHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQSSPQLVKG-L 324
Query: 319 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 377
+ V V CGW+HT A+++ G + +WG G S GQLGHG+ VD P
Sbjct: 325 QDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTS------------GQLGHGDTVDRSTPKR 372
Query: 378 VNF 380
+
Sbjct: 373 IEI 375
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 137/306 (44%), Gaps = 52/306 (16%)
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
G++++V+ +S G HS A+ + WG+ +GQLG G A+ PT V L
Sbjct: 11 GVRRQVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGD--AEERHFPTIVSALDDCEI 68
Query: 180 KQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
G + + A++ K V SWG G GRLGHG S + + P+ IK L+G+
Sbjct: 69 SSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDL---------FIPQPIKALKGL 119
Query: 239 KVKIAAAGFLHSACIDENGRVYIFG------------------------DRAVDKMLFQE 274
+VK A G H I +G V +G + KML
Sbjct: 120 EVKQIACGDSHCLAITTDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAG 179
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
H ++ G+LY WG G LG+G + P++V E + V+CGW+HT
Sbjct: 180 AEHT--TAVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGE-LMKMVACGWRHTI 236
Query: 335 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 393
++E G + T+GW S GQLGHG+ D++ P V ++ K ++ G+
Sbjct: 237 CVAESGNMYTFGW------------SKYGQLGHGDFADHLIPHQVQALKSKKIQAITGGW 284
Query: 394 NHTGAL 399
HT AL
Sbjct: 285 RHTFAL 290
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G P A + ++A+ G HT L G +Y G N FGQ+G
Sbjct: 252 YGQLGHGDFADHLIPHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCG- 310
Query: 108 NIGYSLEPLRISGLKKEVVQI-STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N P + GL+ +VV + G+ H+ A+T G +Y WG+ ++GQLG G +
Sbjct: 311 NTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDR--S 368
Query: 167 IPTKVECLS 175
P ++E LS
Sbjct: 369 TPKRIEILS 377
>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 441
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/363 (31%), Positives = 174/363 (47%), Gaps = 60/363 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG G+ G+LG G E R P V S F+ + ++ CG HT +E VY+ G DFG
Sbjct: 38 WGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHTTAYSEDEHQVYSWGWGDFG 97
Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG + ++ +P++ + G+K + Q++ G H A+T+ GE+ WG+N NGQLGLG
Sbjct: 98 RLGHGNSTDVFTPQPVKALQGIK--IKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGT 155
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ GI K A G E + AVT G + WG G G LG G +
Sbjct: 156 TEDSL--LPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRN---- 209
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ P + +EG K+ + A G+ H+ +
Sbjct: 210 -----DRFVPEKVSSVEGDKMVLVACGWRHTITVS------------------------- 239
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SE 338
S G LYT+G ++ G LG G + P +V+ +S Q+S GW+HT A+ S+
Sbjct: 240 -----SSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEA-LKDSSTSQISGGWRHTMALTSD 293
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
GK+ WGW + GQ+G G++ D+ P VNF E K QV+CG+ HT A
Sbjct: 294 GKLYGWGW------------NKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTLA 341
Query: 399 LLE 401
E
Sbjct: 342 FTE 344
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 107/222 (48%), Gaps = 13/222 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ E P AFE S+K +A G HT +TE G +Y G +G
Sbjct: 143 WGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGN 202
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + P ++S ++ ++V ++ G+ H+ ++ G LY +G + GQLG G
Sbjct: 203 LGLGDR-NDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFE 261
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P KVE L T Q + G+ ++A+T GK+ WG G++G G +
Sbjct: 262 DHL--VPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNA------ 313
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+P + E KV A G+ H+ E V+ +G
Sbjct: 314 ---DHCSPAQVNFPEEQKVAQVACGWRHTLAFTEKKNVFAWG 352
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 63/138 (45%), Gaps = 15/138 (10%)
Query: 264 DRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
D A ++ + +L++G L TWG E+G LG G + P + G F +
Sbjct: 10 DEAPPAVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISG-FDAPGI 68
Query: 324 DQVSCGWKHTAAISEG--KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
V CG HT A SE ++ +WGWG G+LGHGN D P V
Sbjct: 69 TSVICGADHTTAYSEDEHQVYSWGWG------------DFGRLGHGNSTDVFTPQPVKAL 116
Query: 382 ENVKALQVSCGFNHTGAL 399
+ +K Q++CG +H A+
Sbjct: 117 QGIKIKQLACGDSHCLAV 134
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G++G G P + E+ + +ACG HTL TE V+A G GQ
Sbjct: 299 WGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTLAFTEKKNVFAWGRGTSGQ 358
Query: 103 LGISENIGYSLEPLRISGLKKE 124
LG E + + P+ I L +
Sbjct: 359 LGHGEIVDRNT-PVIIDALSPD 379
>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
gi|194702882|gb|ACF85525.1| unknown [Zea mays]
gi|224030327|gb|ACN34239.1| unknown [Zea mays]
gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 443
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/364 (32%), Positives = 181/364 (49%), Gaps = 62/364 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P V S F+ ++ ++ CG HT +E VY+ G DFG
Sbjct: 37 WGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHTTAYSEDELQVYSWGWGDFG 96
Query: 102 QLG--ISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+LG S ++ ++ +P++ + GLK + QI+ G H A+T+ GE+ WG+N NGQLGLG
Sbjct: 97 RLGHGNSSDV-FTPQPVKALQGLK--IKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLG 153
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P K++ + K A G E + AVT G + WG G G LG G + L
Sbjct: 154 TTEDSLL--PQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL 211
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P + +EG K+ + A G+ H+ + ++G
Sbjct: 212 ---------LPEKVSSVEGEKMVLVACGWRHTITVSDSGN-------------------- 242
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-S 337
LYT+G ++ G LG G + P +V+ +S + Q+S GW+HT A+ S
Sbjct: 243 ----------LYTYGWSKYGQLGHGDFEDHLVPHKVEA-LKDSTISQISGGWRHTMALTS 291
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
EGK+ WGW + GQ+G GN+ D+ P V+F E+ K QV+CG+ HT
Sbjct: 292 EGKLYGWGW------------NKFGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWRHTL 339
Query: 398 ALLE 401
AL E
Sbjct: 340 ALSE 343
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 161/339 (47%), Gaps = 57/339 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + +K +ACG +H L +T G V + G N GQ
Sbjct: 90 WGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQ 149
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ SL P +I + V+ I+ G H++A+T DG+LY WG G LGLG +
Sbjct: 150 LGLG-TTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRN 208
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P KV + G A G+ ++ V+ G + ++G G+LGHG L
Sbjct: 209 DRL--LPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHL--- 263
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L+ + + G+ H+
Sbjct: 264 ------VPHKVEALKDSTISQISGGWRHTM------------------------------ 287
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK- 340
+L S G+LY WG N+ G +G+G+ D SP +V P + + QV+CGW+HT A+SE K
Sbjct: 288 ALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFP-EDQKISQVACGWRHTLALSEKKN 346
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
+ +WG G S GQLG+G VD P +++
Sbjct: 347 VFSWGRGTS------------GQLGNGEIVDRNTPVLID 373
>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 545
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/386 (31%), Positives = 183/386 (47%), Gaps = 50/386 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LGLG + RPV A + + +ACG HT+ LTE G VY G D G+
Sbjct: 6 WGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTEEGEVYTWGRGDDGR 65
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG +N G+ P + L+ K + Q++ G +H++A+TV G+LY WG G+LG G +
Sbjct: 66 LGHGDN-GWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNET 124
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P VE L + +Q A G +V + V +WG +G GHG
Sbjct: 125 GH--STPYLVETLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEG----- 177
Query: 222 RSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGD---------------- 264
+Y P ++EL G V+I+A GF H+A + E G V+ FG+
Sbjct: 178 ---HQYLPCPVEELRGKSIVQISACGF-HTAALSEFGEVFTFGEGKFGRLGHNSERNQPV 233
Query: 265 -RAVDKMLFQEGNHA-----RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
R VD + + ++ GE+YTWG E+G LG G P RV+
Sbjct: 234 ARFVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLL 293
Query: 319 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 377
E V Q++CGW HT +++ G++ TWG G H G+LGH + P
Sbjct: 294 -EKLVLQITCGWSHTVTLTDTGEVYTWG-NGDH-----------GKLGHNDTAKVTLPKP 340
Query: 378 VNFGENVKALQVSCGFNHTGALLEYV 403
V+ + + + V+ HT AL++ V
Sbjct: 341 VDVLDGKRVISVASYNEHTVALVDPV 366
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 137/333 (41%), Gaps = 98/333 (29%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG+ +GQLGLG + + P+P ++ L+ Q A G +V +T G+V +WG
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQHRPVP--IDALAERRIVQIACGSGHTVVLTEEGEVYTWGR 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G GRLGHG ++ PRL++EL G ++ G H+A + +G +Y +G
Sbjct: 61 GDDGRLGHGDNG---------WKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWG 111
Query: 264 D--------------------RAVDKMLFQEGNHARRPS--LISGGELYTWGSNENGCLG 301
+ M ++ R + L+ ++YTWG ENG G
Sbjct: 112 GGMYGKLGHGNETGHSTPYLVETLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSG 171
Query: 302 IGSID----------------------------------------------VLHSPERVQ 315
G + + H+ ER Q
Sbjct: 172 HGDTEGHQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQ 231
Query: 316 ------GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
+ V QV+CG HTAA++E G++ TWG GG H GQLGHG+
Sbjct: 232 PVARFVDALAGKRVKQVACGGFHTAAVTETGEVYTWG-GGEH-----------GQLGHGD 279
Query: 369 DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
V+ PT V LQ++CG++HT L +
Sbjct: 280 KVNKTVPTRVESLLEKLVLQITCGWSHTVTLTD 312
>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
Length = 434
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 130/369 (35%), Positives = 181/369 (49%), Gaps = 56/369 (15%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVY 93
L A WG G+ G+LG G E R +P + S A+ G +++ L++ VY
Sbjct: 30 LSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSAVCSGAEYSVALSQPRNEVY 89
Query: 94 ATGLNDFGQLGISE-NIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
+ G DFG+LG + N + +P+R ++G + +V+++ G H+ A+T GEL+ +G+N
Sbjct: 90 SWGWGDFGRLGHGDCNDVFIPQPIRALAG--RNIVKVACGDTHTLAVTDTGELFSFGRNQ 147
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
NGQLGLG + ++P P VE L G A G E S+A T G V +WG G G LG
Sbjct: 148 NGQLGLGTTSDAILPQP--VESLRGQEVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGV 205
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------- 263
G + P + LEGVKV A G+ HS DE G VY FG
Sbjct: 206 GPPED---------RHLPSQVHGLEGVKVTSVACGWRHSIAADETGAVYTFGWSKYGQLG 256
Query: 264 -----DRAVDKMLFQEGNHARRPSLISGG-----------ELYTWGSNENGCLGIGSIDV 307
D+ V K + E R LI+GG +LY+WG N+ G LGIGS
Sbjct: 257 HGDCIDQLVPKAV--ESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTD 314
Query: 308 LHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGH 366
++P VQG + SPV +SCGW+HT A++E G + +WG G GQLGH
Sbjct: 315 SNAPVPVQG-LNTSPVKLLSCGWRHTFAVTEAGDVFSWGRG------------VNGQLGH 361
Query: 367 GNDVDYIHP 375
D P
Sbjct: 362 NEPKDTNAP 370
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 133/301 (44%), Gaps = 52/301 (17%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
V +S G HS A+ +G WG+ +GQLG G A+ P + L
Sbjct: 15 RVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGD--AEERKKPRAIFHLMQASCSAVC 72
Query: 184 LGFEQSVAVTGG-GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
G E SVA++ +V SWG G GRLGHG + + + P+ I+ L G +
Sbjct: 73 SGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDV---------FIPQPIRALAGRNIVK 123
Query: 243 AAAGFLHSACIDENGRVYIFG-----------------DRAVDKMLFQE-------GNHA 278
A G H+ + + G ++ FG + V+ + QE G H+
Sbjct: 124 VACGDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQEVTSIACGGEHS 183
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
+ S G+++ WG G LG+G + H P +V G V V+CGW+H+ A E
Sbjct: 184 L--AATSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHG-LEGVKVTSVACGWRHSIAADE 240
Query: 339 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
G + T+GW S GQLGHG+ +D + P V ++ + + ++ G+ HT
Sbjct: 241 TGAVYTFGW------------SKYGQLGHGDCIDQLVPKAVESLKDSRIVLIAGGWRHTS 288
Query: 398 A 398
A
Sbjct: 289 A 289
>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
Length = 443
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 121/364 (33%), Positives = 183/364 (50%), Gaps = 54/364 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P V S F+ + ++ CG HT +E VY+ G DFG
Sbjct: 38 WGRGEDGQLGHGDAEDRLVPTVLSGFDAPGITSVICGADHTTAYSEDELQVYSWGWGDFG 97
Query: 102 QL--GISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+L G S ++ ++ +P++ + GLK + QI+ G H A+T+ G++ WG+N NGQLGLG
Sbjct: 98 RLGHGNSSDV-FTPQPVKALQGLK--IKQIACGDSHCLAVTMAGQVQSWGRNQNGQLGLG 154
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ +P K++ G+ K A G E + AVT G + WG G G LG G + L
Sbjct: 155 TTEDSL--LPQKIQAFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL 212
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DR 265
P + +EG K+ + A G+ H+ + ++G +Y +G D
Sbjct: 213 ---------LPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDH 263
Query: 266 AV--------DKMLFQ-EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
V D + Q G +L S G+LY WG N+ G +G+G+ D SP +V
Sbjct: 264 LVPHKLEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHF 323
Query: 317 PFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
P + + QV+CGW+HT A+SE K + +WG G S GQLG+G VD P
Sbjct: 324 P-EDQKISQVACGWRHTLALSEKKNVFSWGRGTS------------GQLGNGEIVDRNTP 370
Query: 376 TIVN 379
+++
Sbjct: 371 VLID 374
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 172/352 (48%), Gaps = 52/352 (14%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
++ G +H++ L + + G + GQLG + L P +SG + + G H
Sbjct: 19 VSAGASHSVALLTGNVLCSWGRGEDGQLGHGD-AEDRLVPTVLSGFDAPGITSVICGADH 77
Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
++A + D ++Y WG G+LG G + P P V+ L G+ KQ A G +AVT
Sbjct: 78 TTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQP--VKALQGLKIKQIACGDSHCLAVT 135
Query: 194 GGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
G+V SWG +G+LG G E S+L P+ I+ EGV VK+ AAG H+A
Sbjct: 136 MAGQVQSWGRNQNGQLGLGTTEDSLL----------PQKIQAFEGVCVKMIAAGAEHTAA 185
Query: 253 IDENGRVYIFG-------------DRAV---------DKMLFQEGNHARRPSLISGGELY 290
+ E+G +Y +G DR + +KM+ ++ G LY
Sbjct: 186 VTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLY 245
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGS 349
T+G ++ G LG G + P +++ +S + Q+S GW+HT A+ SEGK+ WGW
Sbjct: 246 TYGWSKYGQLGHGDFEDHLVPHKLEA-LKDSTISQISGGWRHTMALTSEGKLYGWGW--- 301
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ GQ+G GN+ D+ P V+F E+ K QV+CG+ HT AL E
Sbjct: 302 ---------NKFGQVGVGNNDDHCSPVQVHFPEDQKISQVACGWRHTLALSE 344
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 125/265 (47%), Gaps = 26/265 (9%)
Query: 19 KLGSKLGICKRWISSTLQRRFAAL-------WGNGDYGRLGLGSLESRWRPVVCSAFEKH 71
K+ + G+C + I++ + A WG G YG LGLG R P S+ E
Sbjct: 164 KIQAFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGE 223
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QIST 130
+ +ACG HT+ ++++G +Y G + +GQLG + + L P ++ LK + QIS
Sbjct: 224 KMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDH-LVPHKLEALKDSTISQISG 282
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G+ H+ A+T +G+LY WG N GQ+G+G P+ +V Q A G+ ++
Sbjct: 283 GWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPV--QVHFPEDQKISQVACGWRHTL 340
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL--EGVKVK----IAA 244
A++ V SWG G SG+LG+G+ TP LI L +G K A
Sbjct: 341 ALSEKKNVFSWGRGTSGQLGNGE---------IVDRNTPVLIDALSTDGSGCKKLESSTA 391
Query: 245 AGFLHSACIDENGRVYIFGDRAVDK 269
A F + + R I D V K
Sbjct: 392 APFAAKVWVSPSERYAIVPDENVPK 416
>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 177/373 (47%), Gaps = 58/373 (15%)
Query: 32 SSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
++ L + WG G+ G+LG G E R P V ++F+ + ++ CG HT+ ++
Sbjct: 34 AALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEM 93
Query: 92 -VYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGK 149
+Y+ G DFG+LG N P I L+ ++ QI+ G H +T +G+++ WG+
Sbjct: 94 QLYSWGWGDFGRLGHG-NSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGR 152
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N NGQLGLG + +P K++ G+ K A G E + A+T GG + WG G G
Sbjct: 153 NQNGQLGLGNNQDSL--LPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGN- 209
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
LG P + +EG K+ + A G+ HS
Sbjct: 210 --------LGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSV------------------ 243
Query: 270 MLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 329
S+ S G LYT+G ++ G LG G P +++ + P+ Q+S G
Sbjct: 244 ------------SVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEA-LKDVPISQISGG 290
Query: 330 WKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 388
W+HT A++E GK+ WGW + GQ+G ++VD+ P VNF + K +Q
Sbjct: 291 WRHTMAVAEDGKLYGWGW------------NKFGQVGVEDNVDHCSPVEVNFPDEQKIVQ 338
Query: 389 VSCGFNHTGALLE 401
V+CG+ HT AL E
Sbjct: 339 VACGWRHTLALTE 351
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 117/244 (47%), Gaps = 13/244 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ + P AFE +K +A G HT +TE G +Y G +G
Sbjct: 150 WGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGN 209
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+S+ S+ P ++S ++ E +V ++ G+ HS +++ G LY +G + GQLG G
Sbjct: 210 LGLSDRDDRSV-PEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQ 268
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P K+E L + Q + G+ ++AV GK+ WG G+ +G
Sbjct: 269 DHL--VPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQ---------VGVE 317
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ +P + + K+ A G+ H+ + EN ++ +G A ++ E P
Sbjct: 318 DNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTP 377
Query: 282 SLIS 285
+I
Sbjct: 378 KMID 381
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G + P A + + ++ G HT+ + E G +Y G N FGQ+G+ +
Sbjct: 259 YGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVED 318
Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N+ + P+ ++ ++++VQ++ G+ H+ A+T + ++ WG+ ++GQLG G+ + P
Sbjct: 319 NVDH-CSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTP 377
Query: 167 IPTKVECLSGIFTKQ 181
L G KQ
Sbjct: 378 KMIDALSLDGSACKQ 392
>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 177/373 (47%), Gaps = 58/373 (15%)
Query: 32 SSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
++ L + WG G+ G+LG G E R P V ++F+ + ++ CG HT+ ++
Sbjct: 34 AALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEM 93
Query: 92 -VYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGK 149
+Y+ G DFG+LG N P I L+ ++ QI+ G H +T +G+++ WG+
Sbjct: 94 QLYSWGWGDFGRLGHG-NSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGR 152
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N NGQLGLG + +P K++ G+ K A G E + A+T GG + WG G G
Sbjct: 153 NQNGQLGLGNNQDSL--LPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGN- 209
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
LG P + +EG K+ + A G+ HS
Sbjct: 210 --------LGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSV------------------ 243
Query: 270 MLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 329
S+ S G LYT+G ++ G LG G P +++ + P+ Q+S G
Sbjct: 244 ------------SVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEA-LKDVPISQISGG 290
Query: 330 WKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 388
W+HT A++E GK+ WGW + GQ+G ++VD+ P VNF + K +Q
Sbjct: 291 WRHTMAVAEDGKLYGWGW------------NKFGQVGVEDNVDHCSPVEVNFPDEQKIVQ 338
Query: 389 VSCGFNHTGALLE 401
V+CG+ HT AL E
Sbjct: 339 VACGWRHTLALTE 351
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 117/244 (47%), Gaps = 13/244 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ + P AFE +K +A G HT +TE G +Y G +G
Sbjct: 150 WGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGN 209
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+S+ S+ P ++S ++ E +V ++ G+ HS +++ G LY +G + GQLG G
Sbjct: 210 LGLSDRDDRSV-PEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQ 268
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P K+E L + Q + G+ ++AV GK+ WG G+ +G
Sbjct: 269 DHL--VPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQ---------VGVE 317
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ +P + + K+ A G+ H+ + EN ++ +G A ++ E P
Sbjct: 318 DNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTP 377
Query: 282 SLIS 285
+I
Sbjct: 378 KMID 381
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G + P A + + ++ G HT+ + E G +Y G N FGQ+G+ +
Sbjct: 259 YGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVED 318
Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N+ + P+ ++ ++++VQ++ G+ H+ A+T + ++ WG+ ++GQLG G+ + P
Sbjct: 319 NVDH-CSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTP 377
Query: 167 IPTKVECLSGIFTKQ 181
L G KQ
Sbjct: 378 KMIDALSLDGSACKQ 392
>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 115/361 (31%), Positives = 173/361 (47%), Gaps = 60/361 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG G+ G+LG G E R P V S F+ + ++ CG HT +E VY+ G DFG
Sbjct: 38 WGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHTTAYSEDEHQVYSWGWGDFG 97
Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG + ++ +P++ + G+K + Q++ G H A+T+ GE+ WG+N NGQLGLG
Sbjct: 98 RLGHGNSTDVFTPQPVKALQGIK--IKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGT 155
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ GI K A G E + AVT G + WG G G LG G +
Sbjct: 156 TEDSL--LPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRN---- 209
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ P + +EG K+ + A G+ H+ +
Sbjct: 210 -----DRFVPEKVSSVEGDKMVLVACGWRHTITVS------------------------- 239
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SE 338
S G LYT+G ++ G LG G + P +V+ +S Q+S GW+HT A+ S+
Sbjct: 240 -----SSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEA-LKDSSTSQISGGWRHTMALTSD 293
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
GK+ WGW + GQ+G G++ D+ P VNF E K QV+CG+ HT A
Sbjct: 294 GKLYGWGW------------NKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTLA 341
Query: 399 L 399
Sbjct: 342 F 342
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 63/138 (45%), Gaps = 15/138 (10%)
Query: 264 DRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
D A ++ + +L++G L TWG E+G LG G + P + G F +
Sbjct: 10 DEAPPAVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISG-FDAPGI 68
Query: 324 DQVSCGWKHTAAISEG--KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
V CG HT A SE ++ +WGWG G+LGHGN D P V
Sbjct: 69 TSVICGADHTTAYSEDEHQVYSWGWG------------DFGRLGHGNSTDVFTPQPVKAL 116
Query: 382 ENVKALQVSCGFNHTGAL 399
+ +K Q++CG +H A+
Sbjct: 117 QGIKIKQLACGDSHCLAV 134
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 84/218 (38%), Gaps = 52/218 (23%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G SVA+ G + +WG G G+LGHG L P +I + +
Sbjct: 22 GASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRL---------VPTVISGFDAPGITSVI 72
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGS 304
G H+ + E H ++Y+WG + G LG G+
Sbjct: 73 CGADHTTA-------------------YSEDEH----------QVYSWGWGDFGRLGHGN 103
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ +P+ V+ + Q++CG H A++ G++L+WG + GQ
Sbjct: 104 STDVFTPQPVKA-LQGIKIKQLACGDSHCLAVTMAGEVLSWG------------RNQNGQ 150
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
LG G D + P + E + ++ G HT A+ E
Sbjct: 151 LGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTE 188
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 13/77 (16%)
Query: 326 VSCGWKHTAAISEGKIL-TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 384
VS G H+ A+ G +L TWG G EDG QLGHG+ D + PT+++ +
Sbjct: 19 VSAGASHSVALLAGNVLCTWGRG-------EDG-----QLGHGDAEDRLVPTVISGFDAP 66
Query: 385 KALQVSCGFNHTGALLE 401
V CG +HT A E
Sbjct: 67 GITSVICGADHTTAYSE 83
>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 440
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 180/362 (49%), Gaps = 52/362 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLNDFG 101
WG G+ G+LG G + R P SA + + ++ACG HTL +E+ +Y+ G DFG
Sbjct: 37 WGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHTLAYSESRNELYSWGWGDFG 96
Query: 102 QL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+L G S ++ + + GL+ + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 97 RLGHGNSSDLLIPQPIIALQGLR--IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGT 154
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ G+ K A G E SVA+T G++ WG G G LG G +
Sbjct: 155 SEDSL--VPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRN---- 208
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRA 266
+ P + ++ K+ + A G+ H+ + G +Y +G D
Sbjct: 209 -----DRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSL 263
Query: 267 V--------DKMLFQ-EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
V DK++ Q G +L S G LY WG N+ G +G+G SP +V+ P
Sbjct: 264 VPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFP 323
Query: 318 FSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 376
+ V Q+SCGW+HT A++E + + +WG G + GQLGHG+ VD P
Sbjct: 324 HDQKVV-QISCGWRHTIAVTEKENVFSWGRG------------TNGQLGHGDTVDRNSPK 370
Query: 377 IV 378
I+
Sbjct: 371 II 372
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/351 (32%), Positives = 170/351 (48%), Gaps = 50/351 (14%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
++ G +HT+ L V + G + GQLG + L P +S L +++ I+ G H
Sbjct: 18 ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDT-DDRLLPTHLSALDAQQIDSIACGADH 76
Query: 135 SSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+ A + ELY WG G+LG G + +IP P + L G+ KQ A G +AVT
Sbjct: 77 TLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQP--IIALQGLRIKQIACGDSHCLAVT 134
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG +G+LG G S P+ I+ +GV +K+ AAG HS I
Sbjct: 135 MEGEVQSWGRNQNGQLGLGT---------SEDSLVPQKIQTFQGVPIKMVAAGAEHSVAI 185
Query: 254 DENGRVYIFG-------------DRAV---------DKMLFQEGNHARRPSLISGGELYT 291
ENG +Y +G DR + DKM+ S+ S G LYT
Sbjct: 186 TENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYT 245
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 350
+G ++ G LG G+ + P+++Q S+ + QVS GW+H+ A+ S G + WGW
Sbjct: 246 YGWSKYGQLGHGNFEDSLVPQKLQA-LSDKLISQVSGGWRHSMALTSTGLLYGWGW---- 300
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ GQ+G G++VD P V F + K +Q+SCG+ HT A+ E
Sbjct: 301 --------NKFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTE 343
>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
Length = 440
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 180/362 (49%), Gaps = 52/362 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLNDFG 101
WG G+ G+LG G + R P SA + + ++ACG HTL +E+ +Y+ G DFG
Sbjct: 37 WGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHTLAYSESRNELYSWGWGDFG 96
Query: 102 QL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+L G S ++ + + GL+ + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 97 RLGHGNSSDLLIPQPIIALQGLR--IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGT 154
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ G+ K A G E SVA+T G++ WG G G LG G +
Sbjct: 155 SEDSL--VPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRN---- 208
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRA 266
+ P + ++ K+ + A G+ H+ + G +Y +G D
Sbjct: 209 -----DRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSL 263
Query: 267 V--------DKMLFQ-EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
V DK++ Q G +L S G LY WG N+ G +G+G SP +V+ P
Sbjct: 264 VPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFP 323
Query: 318 FSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 376
+ V Q+SCGW+HT A++E + + +WG G + GQLGHG+ VD P
Sbjct: 324 HDQKVV-QISCGWRHTIAVTEKENVFSWGRG------------TNGQLGHGDTVDRNSPK 370
Query: 377 IV 378
I+
Sbjct: 371 II 372
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/351 (32%), Positives = 170/351 (48%), Gaps = 50/351 (14%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
++ G +HT+ L V + G + GQLG + L P +S L +++ I+ G H
Sbjct: 18 ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDT-DDRLLPTHLSALDAQQIDSIACGADH 76
Query: 135 SSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+ A + ELY WG G+LG G + +IP P + L G+ KQ A G +AVT
Sbjct: 77 TLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQP--IIALQGLRIKQIACGDSHCLAVT 134
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG +G+LG G S P+ I+ +GV +K+ AAG HS I
Sbjct: 135 MEGEVQSWGRNQNGQLGLGT---------SEDSLVPQKIQTFQGVPIKMVAAGAEHSVAI 185
Query: 254 DENGRVYIFG-------------DRAV---------DKMLFQEGNHARRPSLISGGELYT 291
ENG +Y +G DR + DKM+ S+ S G LYT
Sbjct: 186 TENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYT 245
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 350
+G ++ G LG G+ + P+++Q S+ + QVS GW+H+ A+ S G + WGW
Sbjct: 246 YGWSKYGQLGHGNFEDSLVPQKLQA-LSDKLISQVSGGWRHSMALTSTGLLYGWGW---- 300
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ GQ+G G++VD P V F + K +Q+SCG+ HT A+ E
Sbjct: 301 --------NKFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTE 343
>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 439
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 125/381 (32%), Positives = 190/381 (49%), Gaps = 67/381 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G + R P SA + + ++ CG HTL +E+ VY+ G DFG
Sbjct: 39 WGRGEDGQLGHGDTDDRLLPTQLSALDAQQIVSVVCGADHTLAYSESKVEVYSWGWGDFG 98
Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG + + +P+R + GL+ + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 99 RLGHGNSSDLFIPQPIRALQGLR--IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGT 156
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ G+ K A G E SVA+T G++ WG G G LG G +
Sbjct: 157 TEDSL--VPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRND--- 211
Query: 220 FLRSTSEYTPRLIKELEGV---KVKIAAAGFLHSACIDENGRVYIFG------------- 263
R I E V K+ + A G+ H+ + +G +Y +G
Sbjct: 212 ----------RCIPEKVSVDCDKMVLVACGWRHTISVSSSGELYTYGWSKYGQLGHGDCK 261
Query: 264 DRAV--------DKMLFQ-EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
D V DK++ Q G +L +GG+LY WG N+ G +G+G SP +V
Sbjct: 262 DHLVPHKLQAFSDKLICQVSGGWRHTMALTTGGQLYGWGWNKFGQVGVGDNVDRCSPVQV 321
Query: 315 QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
+ P + V Q+SCGW+HT A++E + +WG G + GQLG G+ +D+
Sbjct: 322 KFPHDQK-VAQISCGWRHTIAVTEKDNVYSWGRG------------TNGQLGIGDTIDWN 368
Query: 374 HPTIVNFGENVKALQV--SCG 392
+P I ++AL V SCG
Sbjct: 369 YPKI------IEALSVDGSCG 383
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 115/350 (32%), Positives = 170/350 (48%), Gaps = 49/350 (14%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
++ GG+H++ L V + G + GQLG + L P ++S L +++V + G H
Sbjct: 20 ISAGGSHSVALISGNVVCSWGRGEDGQLGHGDT-DDRLLPTQLSALDAQQIVSVVCGADH 78
Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+ A + E+Y WG G+LG G + IP P + L G+ KQ A G +AVT
Sbjct: 79 TLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQP--IRALQGLRIKQIACGDSHCLAVT 136
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG +G+LG G L P+ I+ +GV +K+ AAG HS I
Sbjct: 137 MEGEVQSWGRNQNGQLGLGTTEDSL---------VPQKIQTFQGVPIKMVAAGAEHSVAI 187
Query: 254 DENGRVYIFG-------------DRAV--------DKMLFQEGNHARRPSLISGGELYTW 292
ENG +Y +G DR + DKM+ S+ S GELYT+
Sbjct: 188 TENGELYGWGWGRYGNLGLGDRNDRCIPEKVSVDCDKMVLVACGWRHTISVSSSGELYTY 247
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWGWGGSHG 351
G ++ G LG G P ++Q FS+ + QVS GW+HT A++ G ++ WGW
Sbjct: 248 GWSKYGQLGHGDCKDHLVPHKLQA-FSDKLICQVSGGWRHTMALTTGGQLYGWGW----- 301
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ GQ+G G++VD P V F + K Q+SCG+ HT A+ E
Sbjct: 302 -------NKFGQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTE 344
>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 438
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 177/362 (48%), Gaps = 58/362 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL-FLTETGCVYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT + VY+ G DFG
Sbjct: 32 WGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSVARTEVYSWGWGDFG 91
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N L P I L ++ QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 92 RLG-HGNSSDLLTPKPIKALHGLKIRQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTT 150
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G++ WG G G LG G + L
Sbjct: 151 EDSL--VPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRL-- 206
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P+ + ++G K+ + A G+ H+
Sbjct: 207 -------VPQKVSSVDGDKMVMVACGWRHTI----------------------------- 230
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEG 339
S+ S G LYT+G ++ G LG G + P R++ ++ + Q+S GW+HT A+ ++G
Sbjct: 231 -SVSSLGGLYTYGWSKYGQLGHGDFEDRLVPHRLEALRGDN-ISQISGGWRHTMALTTDG 288
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
K+ WGW + GQ+G G+++D+ P + F ++ K +Q+SCG+ HT A+
Sbjct: 289 KLYGWGW------------NKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAV 336
Query: 400 LE 401
+
Sbjct: 337 TD 338
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 13/222 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ E P AFE S+K +A G HT +TE G ++ G +G
Sbjct: 137 WGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGN 196
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + L P ++S + ++V ++ G+ H+ +++ G LY +G + GQLG G
Sbjct: 197 LGLGDR-NDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFE 255
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P ++E L G Q + G+ ++A+T GK+ WG G++G G
Sbjct: 256 DRL--VPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGD-------- 305
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ +P IK + KV + G+ H+ + + V+ +G
Sbjct: 306 -NIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWG 346
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G E R P A ++ ++ G HT+ LT G +Y G N FGQ+G +
Sbjct: 246 YGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGD 305
Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
NI + P++I ++V+QIS G+ H+ A+T ++ WG+ +NGQLG G+ + P
Sbjct: 306 NIDH-CSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTP 364
Query: 167 IPTKVECLSGIFTKQ 181
+ + + G +Q
Sbjct: 365 MILEALSVDGCSGQQ 379
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 15/135 (11%)
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
V ++LF + +L+SG + +WG E+G LG G + SP ++ + V
Sbjct: 7 VRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSA-LDGHEIVSV 65
Query: 327 SCGWKHTAA--ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 384
+CG HT A ++ ++ +WGWG G+LGHGN D + P + +
Sbjct: 66 TCGADHTTAYSVARTEVYSWGWG------------DFGRLGHGNSSDLLTPKPIKALHGL 113
Query: 385 KALQVSCGFNHTGAL 399
K Q++CG +H A+
Sbjct: 114 KIRQIACGDSHCLAV 128
>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 441
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 181/362 (50%), Gaps = 52/362 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLNDFG 101
WG G+ G+LG G + R P SA + + ++ACG HTL +E+ +Y+ G DFG
Sbjct: 38 WGRGEDGQLGHGDTDDRPLPTQLSALDAQHIDSIACGADHTLAYSESRNELYSWGWGDFG 97
Query: 102 QL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+L G S ++ + + GL+ + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 98 RLGHGNSSDLLIPQPIIALQGLR--IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGN 155
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ G+ K A G E SVA+T G++ WG G G LG G +
Sbjct: 156 TEDSL--VPQKIQAFKGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRN---- 209
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRA 266
+ P + ++ K+ + A G+ H+ + +G +Y +G D
Sbjct: 210 -----DRWNPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYTYGWSKYGQLGHGNFEDSL 264
Query: 267 V--------DKMLFQ-EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
V DK++ Q G +L S G L+ WG N+ G +G+G SP +V+ P
Sbjct: 265 VPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCSPVQVKFP 324
Query: 318 FSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 376
+ V Q+SCGW+HT A++E + + +WG G + GQLGHG+ +D P
Sbjct: 325 QDQRVV-QISCGWRHTIAVTEKENVFSWGRG------------TNGQLGHGDTIDRNSPK 371
Query: 377 IV 378
I+
Sbjct: 372 II 373
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 171/351 (48%), Gaps = 50/351 (14%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
++ G +HT+ L V + G + GQLG + L P ++S L + + I+ G H
Sbjct: 19 ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPL-PTQLSALDAQHIDSIACGADH 77
Query: 135 SSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+ A + ELY WG G+LG G + +IP P + L G+ KQ A G +AVT
Sbjct: 78 TLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQP--IIALQGLRIKQIACGDSHCLAVT 135
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG +G+LG G L P+ I+ +GV +K+ AAG HS I
Sbjct: 136 MEGEVQSWGRNQNGQLGLGNTEDSL---------VPQKIQAFKGVPIKMVAAGAEHSVAI 186
Query: 254 DENGRVYIFG-------------DR---------AVDKMLFQEGNHARRPSLISGGELYT 291
ENG +Y +G DR DKM+ S+ S G +YT
Sbjct: 187 TENGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYT 246
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 350
+G ++ G LG G+ + P+++Q S+ + QVS GW+H+ A+ S G + WGW
Sbjct: 247 YGWSKYGQLGHGNFEDSLVPQKLQA-LSDKLISQVSGGWRHSMALTSTGLLFGWGW---- 301
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ GQ+G G+++D+ P V F ++ + +Q+SCG+ HT A+ E
Sbjct: 302 --------NKFGQVGVGDNLDHCSPVQVKFPQDQRVVQISCGWRHTIAVTE 344
>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
Length = 440
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/361 (33%), Positives = 170/361 (47%), Gaps = 50/361 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT+ +E+ VY+ G DFG
Sbjct: 39 WGRGEDGQLGHGDAEDRLSPTQLSALDDHQIVSVTCGADHTVAYSESRMEVYSWGWGDFG 98
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 99 RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 157
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G + WG G G LG G + L
Sbjct: 158 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL-- 213
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRAV 267
P + G K+ + A G+ H+ + +G +Y +G D V
Sbjct: 214 -------VPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLV 266
Query: 268 DKMLFQEGNHA---------RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
L GN +L S G+LY WG N+ G +G+G+ SP +V+ P
Sbjct: 267 PHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRIP- 325
Query: 319 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 377
+ V QVSCGW+HT A++E + WG G + GQLG G +D P I
Sbjct: 326 DDQKVVQVSCGWRHTLAVTERNNVFAWGRG------------TNGQLGIGESLDRNFPKI 373
Query: 378 V 378
+
Sbjct: 374 I 374
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 173/353 (49%), Gaps = 54/353 (15%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
++ G +H++ L V + G + GQLG + L P ++S L ++V ++ G H
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGD-AEDRLSPTQLSALDDHQIVSVTCGADH 78
Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+ A + E+Y WG G+LG G + P+P K L GI KQ A G +AVT
Sbjct: 79 TVAYSESRMEVYSWGWGDFGRLGHGNSSDLFTPLPIK--ALHGIRIKQIACGDSHCLAVT 136
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG +G+LG G L P+ I+ EG+++K+ AAG H+A +
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSL---------VPQKIQAFEGIRIKMVAAGAEHTAAV 187
Query: 254 DENGRVYIFG-------------DRAVDKMLFQEGNHARRPSLIS-----------GGEL 289
E+G +Y +G DR V + + G + S+++ G L
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAG--GEKMSMVACGWRHTISVSYSGAL 245
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGG 348
YT+G ++ G LG G ++ P +++ S + Q+S GW+HT A+ S+GK+ WGW
Sbjct: 246 YTYGWSKYGQLGHGDLEDHLVPHKLEA-LGNSVISQISGGWRHTMALTSDGKLYGWGW-- 302
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ GQ+G GN++D P V ++ K +QVSCG+ HT A+ E
Sbjct: 303 ----------NKFGQVGVGNNLDQCSPVQVRIPDDQKVVQVSCGWRHTLAVTE 345
>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Brachypodium distachyon]
Length = 449
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 118/364 (32%), Positives = 175/364 (48%), Gaps = 62/364 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL-FLTETGCVYATGLNDFG 101
WG G+ G+LG G E R P V S F+ + ++ CG HT + E VY+ G DFG
Sbjct: 45 WGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVICGADHTTAYSEEEQQVYSWGWGDFG 104
Query: 102 QL--GISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+L G S ++ ++ +P+R + G+K + Q++ G H A+T+ GE+ WG+N NGQLGLG
Sbjct: 105 RLGHGNSSDV-FTPQPVRALQGIK--IKQMACGDSHCLAVTMGGEVQSWGRNQNGQLGLG 161
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ +P K++ GI K A G E + AVT G + WG G G LG G +
Sbjct: 162 TTEDSL--LPQKIQAFEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRN--- 216
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ P + +EG K+ + A G+ H+ +
Sbjct: 217 ------DRFVPEKVSLVEGEKMVLIACGWRHTITVS------------------------ 246
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-S 337
S G LYT+G ++ G LG G + P +V+ +S Q+S GW+HT A+ S
Sbjct: 247 ------SSGILYTYGWSKYGQLGHGDFEDHLFPHKVEA-LKDSSTSQISGGWRHTMALTS 299
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
+GK+ WGW + GQ+G G+ VD+ P V F K QV+CG+ HT
Sbjct: 300 DGKLYGWGW------------NKFGQVGAGDSVDHCSPVQVMFPAEQKVAQVACGWRHTL 347
Query: 398 ALLE 401
A E
Sbjct: 348 AYTE 351
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 102/203 (50%), Gaps = 11/203 (5%)
Query: 19 KLGSKLGICKRWISSTLQRRFAAL-------WGNGDYGRLGLGSLESRWRPVVCSAFEKH 71
K+ + GIC + I++ + A WG G YG LGLG R+ P S E
Sbjct: 171 KIQAFEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGE 230
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIST 130
+ +ACG HT+ ++ +G +Y G + +GQLG + + L P ++ LK QIS
Sbjct: 231 KMVLIACGWRHTITVSSSGILYTYGWSKYGQLGHGDFEDH-LFPHKVEALKDSSTSQISG 289
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G+ H+ A+T DG+LY WG N GQ+G G P+ + Q A G+ ++
Sbjct: 290 GWRHTMALTSDGKLYGWGWNKFGQVGAGDSVDHCSPVQVMFPAEQKV--AQVACGWRHTL 347
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQ 213
A T V +WG G SG+LGHG+
Sbjct: 348 AYTEKKNVFAWGRGTSGQLGHGE 370
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 13/222 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ E P AFE +K +A G HT +TE G +Y G +G
Sbjct: 150 WGRNQNGQLGLGTTEDSLLPQKIQAFEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGN 209
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + P ++S ++ E +V I+ G+ H+ ++ G LY +G + GQLG G
Sbjct: 210 LGLGDR-NDRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGILYTYGWSKYGQLGHGDFE 268
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P KVE L T Q + G+ ++A+T GK+ WG G++G G
Sbjct: 269 DHL--FPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGD-------- 318
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S +P + KV A G+ H+ E V+ +G
Sbjct: 319 -SVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTEKKNVFAWG 359
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 4/151 (2%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G E P A + S ++ G HT+ LT G +Y G N FGQ+G +
Sbjct: 259 YGQLGHGDFEDHLFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGD 318
Query: 108 NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
++ + + +++V Q++ G+ H+ A T ++ WG+ ++GQLG G+ + P+
Sbjct: 319 SVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTEKKNVFAWGRGTSGQLGHGEIVDRNKPL 378
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
G +K+ E S AV KV
Sbjct: 379 MIDAISPDGSGSKK----LESSTAVPFTAKV 405
>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
Length = 370
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 119/361 (32%), Positives = 169/361 (46%), Gaps = 50/361 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT+ +++G VY+ G DFG
Sbjct: 28 WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 87
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 88 RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 146
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G + WG G G LG G
Sbjct: 147 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 198
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRAV 267
T P + G K+ + A G+ H+ + +G +Y +G D +
Sbjct: 199 ---TDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 255
Query: 268 DKMLFQ---------EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
L G +L S G+LY WG N+ G +G+G+ SP +V+ P
Sbjct: 256 PHKLEALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 314
Query: 319 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 377
+ V QVSCGW+HT A++E + WG G + GQLG G VD P I
Sbjct: 315 DDQKVVQVSCGWRHTLAVTERNNVFAWGRG------------TNGQLGIGESVDRNFPKI 362
Query: 378 V 378
+
Sbjct: 363 I 363
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 175/353 (49%), Gaps = 54/353 (15%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
++ G +H++ L V + G + GQLG + P ++S L ++V ++ G H
Sbjct: 9 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP-SPTQLSALDGHQIVSVTCGADH 67
Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+ A + G E+Y WG G+LG G + P+P K L GI KQ A G +AVT
Sbjct: 68 TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK--ALHGIRIKQIACGDSHCLAVT 125
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG +G+LG G L P+ I+ EG+++K+ AAG H+A +
Sbjct: 126 MEGEVQSWGRNQNGQLGLGDTEDSL---------VPQKIQAFEGIRIKMVAAGAEHTAAV 176
Query: 254 DENGRVYIFG-------------DRAVDKMLFQEGNHARRPSLIS-----------GGEL 289
E+G +Y +G DR V + + G + S+++ G L
Sbjct: 177 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTG--GEKMSMVACGWRHTISVSYSGAL 234
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGG 348
YT+G ++ G LG G ++ P +++ S S + Q+S G++HT A+ S+GK+ WGW
Sbjct: 235 YTYGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQISGGFRHTMALTSDGKLYGWGW-- 291
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ GQ+G GN++D P V F ++ K +QVSCG+ HT A+ E
Sbjct: 292 ----------NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTE 334
>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/366 (33%), Positives = 181/366 (49%), Gaps = 56/366 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHS--LKALACGGAHTLFLTET-GCVYATGLND 99
WG G+ G+LG G E R P V S F+ + + ++ CG HT +E VY+ G D
Sbjct: 46 WGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVICGADHTTAYSEDEQQVYSWGWGD 105
Query: 100 FGQL--GISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
FG+L G S ++ ++ +P++ + G+K + QI+ G H A+T+ GE+ WG+N NGQLG
Sbjct: 106 FGRLGHGNSSDV-FTPQPVKALQGIK--IKQIACGDSHCLAVTMAGEVQSWGRNQNGQLG 162
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
LG + +P K++ G+ K A G E + AVT G + WG G G LG G +
Sbjct: 163 LGTTEDSL--LPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRND 220
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------------- 263
L P + +EG K+ + A G+ H+ + +G +Y +G
Sbjct: 221 RL---------VPEKVSSVEGEKMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFE 271
Query: 264 DRAV--------DKMLFQ-EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
D V D + Q G +L S G+LY WG N+ G +G+G D P +V
Sbjct: 272 DHLVPHKLEALKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFPVQV 331
Query: 315 QGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
+ P + V QV+CGW+HT A +E K + +WG G S GQLGHG VD
Sbjct: 332 KFP-EDQKVAQVACGWRHTLAFTEKKNVFSWGRGTS------------GQLGHGEIVDRN 378
Query: 374 HPTIVN 379
P +++
Sbjct: 379 KPVMID 384
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/354 (31%), Positives = 171/354 (48%), Gaps = 54/354 (15%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST---GY 132
++ G +H++ L + + G + GQLG + L P +SG I++ G
Sbjct: 27 VSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAED-RLVPTVLSGFDAAAPGITSVICGA 85
Query: 133 HHSSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
H++A + D ++Y WG G+LG G + P P V+ L GI KQ A G +A
Sbjct: 86 DHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQP--VKALQGIKIKQIACGDSHCLA 143
Query: 192 VTGGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
VT G+V SWG +G+LG G E S+L P+ I+ EGV VK+ AAG H+
Sbjct: 144 VTMAGEVQSWGRNQNGQLGLGTTEDSLL----------PQKIQSFEGVCVKMIAAGAEHT 193
Query: 251 ACIDENGRVYIFG-------------DRAV---------DKMLFQEGNHARRPSLISGGE 288
A + E+G +Y +G DR V +KM+ ++ S G
Sbjct: 194 AAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWRHTITVSSSGS 253
Query: 289 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 347
LYT+G ++ G LG G + P +++ +S + Q+S GW+HT A+ S+GK+ WGW
Sbjct: 254 LYTYGWSKYGQLGHGDFEDHLVPHKLEA-LKDSSISQISGGWRHTMALTSDGKLYGWGW- 311
Query: 348 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ GQ+G G+ D+ P V F E+ K QV+CG+ HT A E
Sbjct: 312 -----------NKFGQVGVGDTDDHCFPVQVKFPEDQKVAQVACGWRHTLAFTE 354
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 105/203 (51%), Gaps = 11/203 (5%)
Query: 19 KLGSKLGICKRWISSTLQRRFAAL-------WGNGDYGRLGLGSLESRWRPVVCSAFEKH 71
K+ S G+C + I++ + A WG G YG LGLG R P S+ E
Sbjct: 174 KIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGE 233
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIST 130
+ +ACG HT+ ++ +G +Y G + +GQLG + + L P ++ LK + QIS
Sbjct: 234 KMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDH-LVPHKLEALKDSSISQISG 292
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G+ H+ A+T DG+LY WG N GQ+G+G P+ K + Q A G+ ++
Sbjct: 293 GWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFPVQVKFPEDQKV--AQVACGWRHTL 350
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQ 213
A T V SWG G SG+LGHG+
Sbjct: 351 AFTEKKNVFSWGRGTSGQLGHGE 373
>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
Protein Uvr8
Length = 372
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/361 (32%), Positives = 168/361 (46%), Gaps = 50/361 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT+ +++G VY+ G DFG
Sbjct: 30 WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGXEVYSWGWGDFG 89
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L + QI+ G H A+T +GE+ WG+N NGQLGLG
Sbjct: 90 RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTXEGEVQSWGRNQNGQLGLGDT 148
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G + WG G G LG G
Sbjct: 149 EDSL--VPQKIQAFEGIRIKXVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 200
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG----------------- 263
T P + G K A G+ H+ + +G +Y +G
Sbjct: 201 ---TDRLVPERVTSTGGEKXSXVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 257
Query: 264 ----DRAVDKMLFQEGNHARRP-SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
+ + + Q AR +L S G+LY WG N+ G +G+G+ SP +V+ P
Sbjct: 258 PHKLEALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 316
Query: 319 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 377
+ V QVSCGW+HT A++E + WG G + GQLG G VD P I
Sbjct: 317 DDQKVVQVSCGWRHTLAVTERNNVFAWGRG------------TNGQLGIGESVDRNFPKI 364
Query: 378 V 378
+
Sbjct: 365 I 365
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 170/351 (48%), Gaps = 50/351 (14%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
++ G +H++ L V + G + GQLG + P ++S L ++V ++ G H
Sbjct: 11 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP-SPTQLSALDGHQIVSVTCGADH 69
Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+ A + G E+Y WG G+LG G + P+P K L GI KQ A G +AVT
Sbjct: 70 TVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIKA--LHGIRIKQIACGDSHCLAVT 127
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG +G+LG G L P+ I+ EG+++K AAG H+A +
Sbjct: 128 XEGEVQSWGRNQNGQLGLGDTEDSL---------VPQKIQAFEGIRIKXVAAGAEHTAAV 178
Query: 254 DENGRVYIFG-------------DRAVDKMLFQEGNHARRP---------SLISGGELYT 291
E+G +Y +G DR V + + G S+ G LYT
Sbjct: 179 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKXSXVACGWRHTISVSYSGALYT 238
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 350
+G ++ G LG G ++ P +++ S S + Q+S G +HT A+ S+GK+ WGW
Sbjct: 239 YGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQISGGARHTXALTSDGKLYGWGW---- 293
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ GQ+G GN++D P V F ++ K +QVSCG+ HT A+ E
Sbjct: 294 --------NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTE 336
>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
gaditana CCMP526]
Length = 511
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 123/360 (34%), Positives = 177/360 (49%), Gaps = 58/360 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD GRLG ++ P + SA S+K + CG HT +++TG ++ G +G+
Sbjct: 63 WGRGDDGRLGHADNHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGK 122
Query: 103 LGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG +G+ P R+ + +EV QI+ G H++A+ GE+Y WG NG G+G +A
Sbjct: 123 LGHGNEVGHP-APCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIG-EA 180
Query: 162 AKVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A+ +P K+E L G+ T+ AA GF + A+T G + SWG G GRLG G E
Sbjct: 181 AEHQYLPKKLEALKGVKITQIAACGF-HTAAITQDGALWSWGEGKFGRLGQGNEK----- 234
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
++ TP ++ L+GV+VK A G HSAC+ E+G V FG
Sbjct: 235 ----NQVTPCCVEGLQGVRVKQVACGGFHSACVTEDGDVLTFG----------------- 273
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-G 339
GG E+G LG G P V+ + + QV+CGW HT +SE G
Sbjct: 274 -----GG--------EHGQLGHGDKTNRTVPCLVKA-LEGAGIVQVTCGWSHTVTLSEDG 319
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
K+ T+G G H G+LGHG + P +V N+K +V+ HT AL
Sbjct: 320 KVFTFG-NGDH-----------GKLGHGANAKSALPKLVESLANMKVAKVASYNEHTVAL 367
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 177/362 (48%), Gaps = 58/362 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+ G GS + P+ + ++ +ACG HT+ LTE V++ G D G+
Sbjct: 11 WGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRGDDGR 70
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++N + P +S L K + Q++ G +H++AI+ G L+ WG G+LG G +
Sbjct: 71 LGHADN-HWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGKLGHGNEV 129
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P P +VE G +Q A G + A+ GG+V WG +G G G+ +
Sbjct: 130 GH--PAPCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGEAAE----- 182
Query: 222 RSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+Y P+ ++ L+GVK+ +IAA GF H+A I ++G
Sbjct: 183 ---HQYLPKKLEALKGVKITQIAACGF-HTAAITQDG----------------------- 215
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-G 339
L++WG + G LG G+ +P V+G V QV+CG H+A ++E G
Sbjct: 216 -------ALWSWGEGKFGRLGQGNEKNQVTPCCVEG-LQGVRVKQVACGGFHSACVTEDG 267
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+LT+G GG H GQLGHG+ + P +V E +QV+CG++HT L
Sbjct: 268 DVLTFG-GGEH-----------GQLGHGDKTNRTVPCLVKALEGAGIVQVTCGWSHTVTL 315
Query: 400 LE 401
E
Sbjct: 316 SE 317
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 128/286 (44%), Gaps = 50/286 (17%)
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
D LY WG+ +GQ G G + +P+P VE L + Q A G +V +T V S
Sbjct: 5 DSMLYSWGRGEDGQCGNGSTNDQEMPMP--VEGLKHLTVVQIACGSGHTVVLTEDKDVWS 62
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG G GRLGH + +Y P L+ L G +K G H+A I + G ++
Sbjct: 63 WGRGDDGRLGHAD---------NHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALW 113
Query: 261 IFGDRAVDKMLFQEGNHARRP------------------------SLISGGELYTWGSNE 296
+G K+ GN P +L++GGE+Y WG E
Sbjct: 114 TWGGGMYGKL--GHGNEVGHPAPCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRE 171
Query: 297 NGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSE 355
NG GIG + + + P++++ +CG+ HTAAI++ L W WG G F
Sbjct: 172 NGVCGIGEAAEHQYLPKKLEALKGVKITQIAACGF-HTAAITQDGAL-WSWG--EGKF-- 225
Query: 356 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G+LG GN+ + + P V + V+ QV+CG H+ + E
Sbjct: 226 ------GRLGQGNEKNQVTPCCVEGLQGVRVKQVACGGFHSACVTE 265
>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
Length = 430
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 118/358 (32%), Positives = 168/358 (46%), Gaps = 51/358 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFGQ 102
G G+ G+LG G E R P + A + +ACG HT + T +Y+ G DFG+
Sbjct: 30 GRGEDGQLGHGDAEDRHLPRIIGALNDCEISLVACGADHTTAYSATRLTIYSWGWGDFGR 89
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG N P I L+ E+ QI+ G H A+T DGE+Y WG+N NGQLGLG
Sbjct: 90 LG-HGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTD 148
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++P K+ G+ K A G E + AVT GGK+ WG G G LG G +
Sbjct: 149 DSLVP--HKLLAFEGVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRM--- 203
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG----------DRAVDKML 271
P + + K+ + A G+ H+ + ++G++Y +G D A D +L
Sbjct: 204 ------LPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYA-DHLL 256
Query: 272 FQE-------------GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
+ G +L G+LY WG N+ G +G G +D SP+ + P
Sbjct: 257 PHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPG 316
Query: 319 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
V QVSCGW+HT A+++ + +WG G S GQLGHG+ VD P
Sbjct: 317 QHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTS------------GQLGHGDAVDRSAP 362
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 169/353 (47%), Gaps = 53/353 (15%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
++ G +HT+ L V + G + GQLG + L P I L E+ ++ G H
Sbjct: 10 VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHL-PRIIGALNDCEISLVACGADH 68
Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
++A + +Y WG G+LG G + +P P K L G+ +Q A G +AVT
Sbjct: 69 TTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKA--LQGLEIRQIACGDSHCLAVT 126
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG +G+LG G L P + EGV VK+ AAG H+A +
Sbjct: 127 ADGEVYSWGRNQNGQLGLGDTDDSL---------VPHKLLAFEGVSVKMLAAGAEHTAAV 177
Query: 254 DENGRVYIFG----------DRAVDKMLFQE----GNHA--------RRPSLIS-GGELY 290
+ G++Y +G DR D+ML E G+ R +S G+LY
Sbjct: 178 TDGGKLYGWGWGRYGNLGLGDRG-DRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLY 236
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
T+G ++ G LG G P +V +E + QVS GW+HT A++E GK+ WGW
Sbjct: 237 TYGWSKYGQLGHGDYADHLLPHQVAA-LAEFNITQVSGGWRHTVALTEAGKLYGWGW--- 292
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF-GENVKALQVSCGFNHTGALLE 401
+ GQ+G G+ D+ P +++ G++ + +QVSCG+ HT A+ +
Sbjct: 293 ---------NKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTD 336
>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
Length = 423
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/361 (31%), Positives = 171/361 (47%), Gaps = 68/361 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT +E+ VY+ G + F
Sbjct: 40 WGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTAYSESFTQVYSWGCDLFT 99
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
I +L LRI QI+ G H A+T+DGE+ WG+N NGQLGLG
Sbjct: 100 PQPIK-----ALHGLRIK-------QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTE 147
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P K++ G+ K A G E + AVT G++ WG G G LG G + L
Sbjct: 148 DSL--VPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRL--- 202
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P + +EGVK+ A G+ H+
Sbjct: 203 ------VPEKVSTVEGVKMVKVACGWRHTI------------------------------ 226
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGK 340
S+ S G LYT+G ++ G LG G + +P +++ E+ + ++S GW+HT A+ S+GK
Sbjct: 227 SVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEA-LQENLISEISGGWRHTMALTSDGK 285
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
+ WGW + GQ+G G++VD+ P V F K + +SCG+ HT A+
Sbjct: 286 LYGWGW------------NKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVT 333
Query: 401 E 401
E
Sbjct: 334 E 334
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 115/243 (47%), Gaps = 26/243 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ E P AF+ S+K +A G HT +TE G +Y G +G
Sbjct: 133 WGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGN 192
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + L P ++S ++ ++V+++ G+ H+ +++ G LY +G + GQLG G
Sbjct: 193 LGLGDR-NDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFE 251
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P K+E L + + G+ ++A+T GK+ WG G++G G
Sbjct: 252 DHL--TPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGD-------- 301
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRAVD 268
+ +P +K KV + G+ H+ + E V+ +G DR +
Sbjct: 302 -NVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIP 360
Query: 269 KML 271
KM+
Sbjct: 361 KMI 363
>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 437
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 173/365 (47%), Gaps = 65/365 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG G+ G+LG G + R P SA + + + CG HT+ +E+G VY+ G DFG
Sbjct: 38 WGRGEDGQLGHGDTDDRLFPTKLSALDGQDIICVTCGADHTMARSESGRDVYSWGWGDFG 97
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG ++ L P I L+ ++ QI+ G H A+T+D ++ WG+N NG+LGLG
Sbjct: 98 RLGHGDHSDL-LIPHPIKALQGLMIQQIACGDSHCLAVTMDSQVLSWGRNQNGELGLGTA 156
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ I K A G E SVA+T G + WG G G LG G +
Sbjct: 157 EDSL--LPQKIQIFEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRND---- 210
Query: 221 LRSTSEYTPRLIKE---LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
RL+ E ++G K+ + A G+ H+ C+
Sbjct: 211 ---------RLLPEKVTVDGDKMAMVACGWRHTICVS----------------------- 238
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 336
S G LYT G + G LG G + P +VQ S+ + QVS GW+H+ A+
Sbjct: 239 -------SSGGLYTNGWGKYGQLGHGDFEDHLVPRKVQA-LSDKFISQVSGGWRHSMALT 290
Query: 337 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
S G++L WGW + GQ+G GN+ D P VNF + K +SCG+ HT
Sbjct: 291 SSGQLLGWGW------------NKFGQIGVGNNFDCCSPMQVNFPHDQKVQMISCGWRHT 338
Query: 397 GALLE 401
A+ E
Sbjct: 339 IAVTE 343
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 152/338 (44%), Gaps = 58/338 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G P A + ++ +ACG +H L +T V + G N G+
Sbjct: 91 WGWGDFGRLGHGDHSDLLIPHPIKALQGLMIQQIACGDSHCLAVTMDSQVLSWGRNQNGE 150
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ SL P +I ++ + ++ G HS AIT DG LY WG G LGLG +
Sbjct: 151 LGLG-TAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRN 209
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+++P V+ G A G+ ++ V+ G + + G G G+LGHG L
Sbjct: 210 DRLLPEKVTVD---GDKMAMVACGWRHTICVSSSGGLYTNGWGKYGQLGHGDFEDHL--- 263
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
PR ++ L + + G+ HS
Sbjct: 264 ------VPRKVQALSDKFISQVSGGWRHSM------------------------------ 287
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK- 340
+L S G+L WG N+ G +G+G+ SP +V P + V +SCGW+HT A++E +
Sbjct: 288 ALTSSGQLLGWGWNKFGQIGVGNNFDCCSPMQVNFPHDQK-VQMISCGWRHTIAVTEREN 346
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
+ +WG G + GQLG+G +D PTI+
Sbjct: 347 VYSWGRGAN------------GQLGNGETIDRNVPTII 372
>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
Length = 430
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/358 (32%), Positives = 167/358 (46%), Gaps = 51/358 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFGQ 102
G G+ G+LG G E R P + A + +ACG HT + T +Y+ G DFG+
Sbjct: 30 GRGEDGQLGHGDAEDRLLPRIIGALNDCEISLVACGADHTTAYSATRLTIYSWGWGDFGR 89
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG N P I L+ E+ QI+ G H A+T DGE+Y WG+N NGQLGLG
Sbjct: 90 LG-HGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTD 148
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++P K+ G+ K A G E + AVT GK+ WG G G LG G +
Sbjct: 149 DSLVP--HKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRM--- 203
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG----------DRAVDKML 271
P + + K+ + A G+ H+ + ++G++Y +G D A D +L
Sbjct: 204 ------LPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYA-DHLL 256
Query: 272 FQE-------------GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
+ G +L G+LY WG N+ G +G G +D SP+ + P
Sbjct: 257 PHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPG 316
Query: 319 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
V QVSCGW+HT A+++ + +WG G S GQLGHG+ VD P
Sbjct: 317 QHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTS------------GQLGHGDAVDRSAP 362
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 170/353 (48%), Gaps = 53/353 (15%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
++ G +HT+ L V + G + GQLG + L P I L E+ ++ G H
Sbjct: 10 VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAED-RLLPRIIGALNDCEISLVACGADH 68
Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
++A + +Y WG G+LG G + +P P K L G+ +Q A G +AVT
Sbjct: 69 TTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKA--LQGLEIRQIACGDSHCLAVT 126
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG +G+LG G L P + EGV VK+ AAG H+A +
Sbjct: 127 ADGEVYSWGRNQNGQLGLGDTDDSL---------VPHKLLAFEGVSVKMLAAGAEHTAAV 177
Query: 254 DENGRVYIFG----------DRAVDKMLFQE----GNHA--------RRPSLIS-GGELY 290
++G++Y +G DR D+ML E G+ R +S G+LY
Sbjct: 178 TDSGKLYGWGWGRYGNLGLGDRG-DRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLY 236
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
T+G ++ G LG G P +V +E + QVS GW+HT A++E GK+ WGW
Sbjct: 237 TYGWSKYGQLGHGDYADHLLPHQVAA-LAEFNITQVSGGWRHTVALTEAGKLYGWGW--- 292
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF-GENVKALQVSCGFNHTGALLE 401
+ GQ+G G+ D+ P +++ G++ + +QVSCG+ HT A+ +
Sbjct: 293 ---------NKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTD 336
>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 341
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/360 (32%), Positives = 174/360 (48%), Gaps = 58/360 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LGLG + P A ++ +ACG HT+ LT G V+ G D G+
Sbjct: 5 WGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRGDDGR 64
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG +N G+ P L ++V Q++ G +H++A+T +G+LY WG G+LG G +A
Sbjct: 65 LGHGDN-GWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHGDEA 123
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P +VE L G Q A G + VT G + +WG +G GHG+
Sbjct: 124 GHA--TPKRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEG----- 176
Query: 222 RSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+Y PRL++ + +V +I+A GF H+A + +
Sbjct: 177 ---HQYLPRLLESMAAKRVAQISACGF-HTAIVTD------------------------- 207
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-G 339
GEL+TWG + G LG S HSP V + P QVSCG HTA +SE G
Sbjct: 208 -----AGELFTWGEGKFGRLGHMSERNCHSPTIVDYMVGKKP-RQVSCGGFHTAVVSEDG 261
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
++ T+G GG H GQLGH + V+ + PT V + + Q++CG++H+ AL
Sbjct: 262 RLYTFG-GGEH-----------GQLGHNDRVNKMTPTFVEALDGMFVSQITCGWSHSVAL 309
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 142/313 (45%), Gaps = 58/313 (18%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKN 150
V+ G + GQLG+ + EP + L+ V QI+ G H+ +T DGE++ WG+
Sbjct: 2 VFTWGRGEDGQLGLGDTSDQD-EPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRG 60
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+G+LG G K +P T + L+G Q G + AVTG G + +WG G G+LG
Sbjct: 61 DDGRLGHGDNGWKYVPRMT--QSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLG 118
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
HG E+ TP+ ++ L G V A G H+A +
Sbjct: 119 HGDEAG---------HATPKRVEALVGATVAQIACGSRHTAIV----------------- 152
Query: 271 LFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS-CG 329
+ G LYTWG ENG G G + R+ + V Q+S CG
Sbjct: 153 -------------TASGALYTWGDKENGVAGHGETEGHQYLPRLLESMAAKRVAQISACG 199
Query: 330 WKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 388
+ HTA +++ G++ TWG G F G+LGH ++ + PTIV++ K Q
Sbjct: 200 F-HTAIVTDAGELFTWG----EGKF--------GRLGHMSERNCHSPTIVDYMVGKKPRQ 246
Query: 389 VSCGFNHTGALLE 401
VSCG HT + E
Sbjct: 247 VSCGGFHTAVVSE 259
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 110/243 (45%), Gaps = 12/243 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG+LG G P A ++ +ACG HT +T +G +Y G + G
Sbjct: 109 WGGGMYGKLGHGDEAGHATPKRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENGV 168
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G E G+ P + + K V QIS H++ +T GEL+ WG+ G+LG +
Sbjct: 169 AGHGETEGHQYLPRLLESMAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLG--HMS 226
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ PT V+ + G +Q + G + V+ G++ ++G G G+LGH
Sbjct: 227 ERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDR------- 279
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
++ TP ++ L+G+ V G+ HS + G VY +G+ K+ G P
Sbjct: 280 --VNKMTPTFVEALDGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGHGNGRKVAVP 337
Query: 282 SLI 284
+
Sbjct: 338 QAV 340
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +GRLG S + P + + ++CGG HT ++E G +Y G + GQ
Sbjct: 214 WGEGKFGRLGHMSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ + + P + L V QI+ G+ HS A+TV G +Y WG +G+LG G
Sbjct: 274 LGHNDRVN-KMTPTFVEALDGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGHGN-- 330
Query: 162 AKVIPIPTKVE 172
+ + +P VE
Sbjct: 331 GRKVAVPQAVE 341
>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/364 (31%), Positives = 171/364 (46%), Gaps = 50/364 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P S + + ++ CG HT +E+ VY+ G DFG
Sbjct: 42 WGRGEDGQLGHGDAEDRPTPTQLSTLDGLDIISITCGADHTTSYSESRMEVYSWGWGDFG 101
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N P I L ++ QI+ G H A+T+DGE+ WG+N NGQLGLG
Sbjct: 102 RLG-HGNSSDLFTPQPIKALHSLKIRQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTT 160
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ G+ K A G E + AVT G++ WG G G LG G + L
Sbjct: 161 EDSL--VPQKIQAFQGVSIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRL-- 216
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM--------LF 272
P + + G K+ + A G+ H+ + +G +Y +G ++ L
Sbjct: 217 -------VPEKVSLVNGDKMIMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLT 269
Query: 273 QEGNHARRPS--------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
A R S L S G LY WG N+ G +G+G SP +V+ P
Sbjct: 270 PHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGVGDNIDHCSPVQVKFPH 329
Query: 319 SES-PVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 376
++ + Q+SCGW+HT AI+E + + +WG G + GQLGHG +D P
Sbjct: 330 EQAHSLVQISCGWRHTLAITERQNVFSWGRG------------TNGQLGHGESMDRNLPK 377
Query: 377 IVNF 380
I+
Sbjct: 378 IIEV 381
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 169/353 (47%), Gaps = 52/353 (14%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
++ G +H++ L V + G + GQLG + P ++S L +++ I+ G H
Sbjct: 23 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPT-PTQLSTLDGLDIISITCGADH 81
Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+++ + E+Y WG G+LG G + P P K L + +Q A G +AVT
Sbjct: 82 TTSYSESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIK--ALHSLKIRQIACGDSHCLAVT 139
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG +G+LG G L P+ I+ +GV +K+ AAG H+A +
Sbjct: 140 MDGEVQSWGRNQNGQLGLGTTEDSL---------VPQKIQAFQGVSIKMVAAGAEHTAAV 190
Query: 254 DENGRVYIFG-------------DRAV---------DKMLFQEGNHARRPSLISGGELYT 291
E+G +Y +G DR V DKM+ S+ S G LYT
Sbjct: 191 TEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISVSSSGGLYT 250
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 350
+G ++ G LG G + +P +V+ +S + +S GW+HT A+ S+G + WGW
Sbjct: 251 YGWSKYGQLGHGDFEDHLTPHKVEA-LRDSYISMISGGWRHTMALTSDGNLYGWGW---- 305
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG-ENVKAL-QVSCGFNHTGALLE 401
+ GQ+G G+++D+ P V F E +L Q+SCG+ HT A+ E
Sbjct: 306 --------NKFGQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAITE 350
Score = 37.7 bits (86), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAISEGKIL-TWGWGGSHGTFSEDGHSSGGQLGHGN 368
S V GP + V +S G H+ A+ G I+ +WG G EDG QLGHG+
Sbjct: 9 SGSEVSGPIRQ--VILISAGASHSVALLSGNIVCSWGRG-------EDG-----QLGHGD 54
Query: 369 DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
D PT ++ + + + ++CG +HT + E
Sbjct: 55 AEDRPTPTQLSTLDGLDIISITCGADHTTSYSE 87
>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
Length = 437
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 66/366 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G + R P + S E + ++ CG HT+ +E+ VY+ G DFG
Sbjct: 38 WGRGEDGQLGHGDAQDRLSPTILSTLEGLEIISVICGADHTIAYSESHTDVYSWGWGDFG 97
Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG + ++ +P+R + GLK + QI+ G H A+T++G++ WG+N NGQLGLG
Sbjct: 98 RLGHGNSSDLFTPQPIRQLHGLK--IKQIACGDSHCLAVTMEGQVQSWGRNQNGQLGLGT 155
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ G+ K A G E + AVT G++ WG G G LG G L
Sbjct: 156 TEDSL--VPQKIQAFQGVPIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRKDRL- 212
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P + G K+ + A G+ H+
Sbjct: 213 --------VPEKVSLPHGEKMVMVACGWRHTI---------------------------- 236
Query: 280 RPSLISGGELYTWGSNENGCLGIGSID---VLHSPERVQGPFSESPVDQVSCGWKHTAAI 336
S+ S G LYT+G ++ G LG G + H E +QG F + Q+S GW+HT A+
Sbjct: 237 --SVSSSGGLYTYGWSKYGQLGHGDYADHLIPHQLEALQGSF----ISQISGGWRHTMAV 290
Query: 337 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
S+GK+ WGW + GQ+G G++VD P V K + +SCG+ H
Sbjct: 291 TSDGKLYGWGW------------NKFGQVGVGDNVDRSSPVQVKLPLEQKVILISCGWRH 338
Query: 396 TGALLE 401
T A+ E
Sbjct: 339 TLAVTE 344
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 168/363 (46%), Gaps = 65/363 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P +K +ACG +H L +T G V + G N GQ
Sbjct: 91 WGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIACGDSHCLAVTMEGQVQSWGRNQNGQ 150
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ SL P +I + ++ ++ G H++A+T DGELY WG G LGLG +
Sbjct: 151 LGLGTTED-SLVPQKIQAFQGVPIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRK 209
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P KV G A G+ +++V+ G + ++G G+LGHG + L
Sbjct: 210 DRL--VPEKVSLPHGEKMVMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDYADHL--- 264
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L+G + + G+ H+ + +G+
Sbjct: 265 ------IPHQLEALQGSFISQISGGWRHTMAVTSDGK----------------------- 295
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK- 340
LY WG N+ G +G+G SP +V+ P E V +SCGW+HT A++E +
Sbjct: 296 -------LYGWGWNKFGQVGVGDNVDRSSPVQVKLPL-EQKVILISCGWRHTLAVTERQN 347
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV--SCGFNHTGA 398
+ +WG G + GQLG+G D P I +KAL V SCG + +
Sbjct: 348 VFSWGRG------------TNGQLGNGECTDRNVPVI------IKALSVDGSCGQHIESS 389
Query: 399 LLE 401
+++
Sbjct: 390 MVD 392
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
V ++L + +L+SG + TWG E+G LG G SP + + V
Sbjct: 13 VRRVLLISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLSPT-ILSTLEGLEIISV 71
Query: 327 SCGWKHTAAISEG--KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 384
CG HT A SE + +WGWG G+LGHGN D P + +
Sbjct: 72 ICGADHTIAYSESHTDVYSWGWG------------DFGRLGHGNSSDLFTPQPIRQLHGL 119
Query: 385 KALQVSCGFNHTGAL 399
K Q++CG +H A+
Sbjct: 120 KIKQIACGDSHCLAV 134
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 13/77 (16%)
Query: 326 VSCGWKHTAAISEGKIL-TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 384
+S G H+ A+ G ++ TWG G EDG QLGHG+ D + PTI++ E +
Sbjct: 19 ISAGASHSVALLSGNVVCTWGRG-------EDG-----QLGHGDAQDRLSPTILSTLEGL 66
Query: 385 KALQVSCGFNHTGALLE 401
+ + V CG +HT A E
Sbjct: 67 EIISVICGADHTIAYSE 83
>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 513
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/360 (32%), Positives = 172/360 (47%), Gaps = 45/360 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LGLG + RPV+ A + + +ACG HT+ L+E G VY G D G+
Sbjct: 12 WGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGR 71
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG +N G+ P + L+ + +VQ + G +H++A+T GELY WG G+LG G ++
Sbjct: 72 LGHGDN-GWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNES 130
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P K G Q A G +V +T GKV +WG +G +GH
Sbjct: 131 GHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADG----- 185
Query: 222 RSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+Y PR+++ L+ V ++AA GF H+A
Sbjct: 186 ---HQYLPRMLESLQAKTVTQVAACGF-HTA----------------------------- 212
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEG 339
+L + GE++TWG + G LG G P V+ + V V+CG H+AAI G
Sbjct: 213 -ALTAAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKR-VGHVACGGFHSAAILDSG 270
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
++ TWG GG HG G+ G+LGHG+ PT+V + ++V+ HT AL
Sbjct: 271 ELYTWG-GGEHGQVYTFGNGDHGKLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAAL 329
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 127/289 (43%), Gaps = 52/289 (17%)
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
V G +Y WG+ +GQLGLG + P+ V+ L Q A G +V ++ G V
Sbjct: 5 VAGLVYSWGRGEDGQLGLGDTNDQDRPV--LVDALKSKGVVQVACGSGHTVVLSEDGAVY 62
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
+WG G GRLGHG +Y PR+++ LEG ++ A G H+A + + G +
Sbjct: 63 TWGRGDDGRLGHGDNG---------WKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGEL 113
Query: 260 YIFGDRAVDKMLFQEGNHARRPS--------------------------LISGGELYTWG 293
Y +G K+ GN + P+ L G++YTWG
Sbjct: 114 YTWGGGMYGKL--GHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWG 171
Query: 294 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQV-SCGWKHTAAISEGKILTWGWGGSHGT 352
ENG +G + D R+ V QV +CG+ A + G+I TWG G
Sbjct: 172 DKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWG----EGK 227
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
F G+LGHG + + + P +V + V+CG H+ A+L+
Sbjct: 228 F--------GRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILD 268
>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
Length = 463
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 119/381 (31%), Positives = 174/381 (45%), Gaps = 69/381 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA----CGGAHTL-FLTETGCVYATGL 97
WG G+ G+LG G E R P V +A + +A CG HT + E +Y+ G
Sbjct: 44 WGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGW 103
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
DFG+LG N P I L+ + QI+ G H A+TV G ++ WG+N NGQLG
Sbjct: 104 GDFGRLGHG-NSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLG 162
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
LG + +P K++ G+ K A G E + AVT G + WG G G LG G
Sbjct: 163 LGNTEDSL--LPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDD 220
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------------- 263
L P + + G K+ + A G+ H+ + +G +Y +G
Sbjct: 221 RL---------IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFE 271
Query: 264 ------------------DRAVDKMLFQEGNHARRP------SLISGGELYTWGSNENGC 299
+ AV+ + F G+ R +L + G+LY WG N+ G
Sbjct: 272 DHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAADGKLYGWGWNKFGQ 331
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGH 358
+G+G + SP +V P +E V QV+CGW+HT A++E K + +WG G S
Sbjct: 332 VGVGDNEDHCSPVQVNFP-NEQKVVQVACGWRHTLALTEAKNVFSWGRGTS--------- 381
Query: 359 SSGGQLGHGNDVDYIHPTIVN 379
GQLGHG VD P +++
Sbjct: 382 ---GQLGHGEIVDRNIPKMID 399
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 161/394 (40%), Gaps = 105/394 (26%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
+ S+ ++ G +H++ L G V + G + GQLG + + + + ++
Sbjct: 19 ERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVA 78
Query: 130 T----GYHHSSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ G H++A + + +LY WG G+LG G + P P ++ L G+ Q A
Sbjct: 79 SVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQP--IQALQGVRITQIAC 136
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G +AVT G V SWG +G+LG G E S+L P+ I+ EGV+VK+
Sbjct: 137 GDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLL----------PQKIQAFEGVRVKMI 186
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
AAG H+A + E+G +LY WG G LG+G
Sbjct: 187 AAGAEHTAAVTEDG------------------------------DLYGWGWGRYGNLGLG 216
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGG----SHGTFSE--- 355
D PE+V + V V+CGW+HT +S G I T+GW HG F +
Sbjct: 217 DRDDRLIPEKVSSVNGQKMV-LVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLV 275
Query: 356 ------------------------------------------DGHSSG------GQLGHG 367
DG G GQ+G G
Sbjct: 276 PHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAADGKLYGWGWNKFGQVGVG 335
Query: 368 NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
++ D+ P VNF K +QV+CG+ HT AL E
Sbjct: 336 DNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTE 369
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 21/167 (12%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSL---------------KALACGGAHTLFLTETGCV 92
YG+LG G E P A + ++ + GG L G +
Sbjct: 262 YGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAADGKL 321
Query: 93 YATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
Y G N FGQ+G+ +N + P++++ +++VVQ++ G+ H+ A+T ++ WG+ +
Sbjct: 322 YGWGWNKFGQVGVGDNEDH-CSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGT 380
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
+GQLG G+ + IP G KQ E S AV KV
Sbjct: 381 SGQLGHGEIVDRNIPKMIDALSSDGSACKQ----LESSKAVPMSAKV 423
>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
Group]
gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 119/366 (32%), Positives = 171/366 (46%), Gaps = 54/366 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA----CGGAHTL-FLTETGCVYATGL 97
WG G+ G+LG G E R P V +A + +A CG HT + E +Y+ G
Sbjct: 49 WGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGW 108
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
DFG+LG N P I L+ + QI+ G H A+TV G ++ WG+N NGQLG
Sbjct: 109 GDFGRLGHG-NSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLG 167
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
LG ++P K++ G+ K A G E + AVT G + WG G G LG G
Sbjct: 168 LGNTEDSLLP--QKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDD 225
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------------- 263
L P + + G K+ + A G+ H+ + +G +Y +G
Sbjct: 226 RL---------IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFE 276
Query: 264 DRAV--------DKMLFQ-EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
D V D + Q G +L + G+LY WG N+ G +G+G + SP +V
Sbjct: 277 DHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQV 336
Query: 315 QGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
P +E V QV+CGW+HT A++E K + +WG G S GQLGHG VD
Sbjct: 337 NFP-NEQKVVQVACGWRHTLALTEAKNVFSWGRGTS------------GQLGHGEIVDRN 383
Query: 374 HPTIVN 379
P +++
Sbjct: 384 IPKMID 389
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 173/361 (47%), Gaps = 54/361 (14%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
+ S+ ++ G +H++ L G V + G + GQLG + + + + ++
Sbjct: 24 ERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVA 83
Query: 130 T----GYHHSSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ G H++A + + +LY WG G+LG G + P P ++ L G+ Q A
Sbjct: 84 SVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQP--IQALQGVRITQIAC 141
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G +AVT G V SWG +G+LG G E S+L P+ I+ EGV+VK+
Sbjct: 142 GDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLL----------PQKIQAFEGVRVKMI 191
Query: 244 AAGFLHSACIDENGRVYIFG-------------DRAV---------DKMLFQEGNHARRP 281
AAG H+A + E+G +Y +G DR + KM+
Sbjct: 192 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTI 251
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 340
++ S G +YT+G ++ G LG G + P +++ ++ + Q+S GW+HT A++ +GK
Sbjct: 252 TVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEA-LKDTTISQISGGWRHTMALAADGK 310
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
+ WGW + GQ+G G++ D+ P VNF K +QV+CG+ HT AL
Sbjct: 311 LYGWGW------------NKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALT 358
Query: 401 E 401
E
Sbjct: 359 E 359
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G E P A + ++ ++ G HT+ L G +Y G N FGQ+G+ +
Sbjct: 267 YGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGD 326
Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N + P++++ +++VVQ++ G+ H+ A+T ++ WG+ ++GQLG G+ + IP
Sbjct: 327 NEDH-CSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIP 385
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
G KQ E S AV KV
Sbjct: 386 KMIDALSSDGSACKQ----LESSKAVPMSAKV 413
>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
Length = 448
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 119/366 (32%), Positives = 171/366 (46%), Gaps = 54/366 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA----CGGAHTL-FLTETGCVYATGL 97
WG G+ G+LG G E R P V +A + +A CG HT + E +Y+ G
Sbjct: 44 WGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGW 103
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
DFG+LG N P I L+ + QI+ G H A+TV G ++ WG+N NGQLG
Sbjct: 104 GDFGRLGHG-NSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLG 162
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
LG ++P K++ G+ K A G E + AVT G + WG G G LG G
Sbjct: 163 LGNTEDSLLP--QKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDD 220
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------------- 263
L P + + G K+ + A G+ H+ + +G +Y +G
Sbjct: 221 RL---------IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFE 271
Query: 264 DRAV--------DKMLFQ-EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
D V D + Q G +L + G+LY WG N+ G +G+G + SP +V
Sbjct: 272 DHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQV 331
Query: 315 QGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
P +E V QV+CGW+HT A++E K + +WG G S GQLGHG VD
Sbjct: 332 NFP-NEQKVVQVACGWRHTLALTEAKNVFSWGRGTS------------GQLGHGEIVDRN 378
Query: 374 HPTIVN 379
P +++
Sbjct: 379 IPKMID 384
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 173/361 (47%), Gaps = 54/361 (14%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
+ S+ ++ G +H++ L G V + G + GQLG + + + + ++
Sbjct: 19 ERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVA 78
Query: 130 T----GYHHSSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ G H++A + + +LY WG G+LG G + P P ++ L G+ Q A
Sbjct: 79 SVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQP--IQALQGVRITQIAC 136
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G +AVT G V SWG +G+LG G E S+L P+ I+ EGV+VK+
Sbjct: 137 GDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLL----------PQKIQAFEGVRVKMI 186
Query: 244 AAGFLHSACIDENGRVYIFG-------------DRAV---------DKMLFQEGNHARRP 281
AAG H+A + E+G +Y +G DR + KM+
Sbjct: 187 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTI 246
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 340
++ S G +YT+G ++ G LG G + P +++ ++ + Q+S GW+HT A++ +GK
Sbjct: 247 TVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEA-LKDTTISQISGGWRHTMALAADGK 305
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
+ WGW + GQ+G G++ D+ P VNF K +QV+CG+ HT AL
Sbjct: 306 LYGWGW------------NKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALT 353
Query: 401 E 401
E
Sbjct: 354 E 354
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G E P A + ++ ++ G HT+ L G +Y G N FGQ+G+ +
Sbjct: 262 YGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGD 321
Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N + P++++ +++VVQ++ G+ H+ A+T ++ WG+ ++GQLG G+ + IP
Sbjct: 322 NEDH-CSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIP 380
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
G KQ E S AV KV
Sbjct: 381 KMIDALSSDGSACKQ----LESSKAVPMSAKV 408
>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 448
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 176/372 (47%), Gaps = 53/372 (14%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTL-FLTETGCV 92
L + WG G+ G+LG G E R P + S F+ + ++ CG HT + E +
Sbjct: 36 LSSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASVVICGADHTTAYSDEQMQL 95
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNS 151
Y+ G DFG+LG N P I L+ ++ QI+ G H A+T G+++ WG+N
Sbjct: 96 YSWGWGDFGRLGHG-NSSDVFHPQPIEALQGIKIKQIACGDSHCLAVTDAGQVHSWGRNQ 154
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
NGQLGLG ++P K+ G+ K A G E + A+ G + WG G G LG
Sbjct: 155 NGQLGLGNTEDSLLP--QKIHAFEGVCVKMIAAGAEHTAAILEDGDLYGWGWGQYGNLGL 212
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------- 263
G + L P + +EG K+ + A G+ H+ + +G +Y +G
Sbjct: 213 GDRNDRL---------VPEKVSSVEGEKMVLVACGWRHTVTVSSSGDLYTYGWSKYGQLG 263
Query: 264 -----DRAV--------DKMLFQEGNHARRPSLISG-GELYTWGSNENGCLGIGSIDVLH 309
D V D+ + Q R ++G G+LY WG N+ G +G+ +V H
Sbjct: 264 HGDFEDHLVPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVGVAD-NVDH 322
Query: 310 -SPERVQGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHG 367
SP +V P E V QV+CGW+HT A++E K + +WG G S GQLGHG
Sbjct: 323 CSPVQVIFP-DEQKVAQVACGWRHTLALTENKNVFSWGRGTS------------GQLGHG 369
Query: 368 NDVDYIHPTIVN 379
+D P +++
Sbjct: 370 EIIDRNTPKMID 381
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 173/359 (48%), Gaps = 53/359 (14%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-- 127
+ ++ ++ G H++ L + V + G + GQLG + + P +SG +
Sbjct: 19 EQTVALVSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPV-PTLLSGFDVPGIASV 77
Query: 128 ISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
+ G H++A + + +LY WG G+LG G + P P +E L GI KQ A G
Sbjct: 78 VICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQP--IEALQGIKIKQIACGD 135
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+AVT G+V SWG +G+LG G E S+L P+ I EGV VK+ AA
Sbjct: 136 SHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLL----------PQKIHAFEGVCVKMIAA 185
Query: 246 GFLHSACIDENGRVYIFG-------------DRAV---------DKMLFQEGNHARRPSL 283
G H+A I E+G +Y +G DR V +KM+ ++
Sbjct: 186 GAEHTAAILEDGDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEKMVLVACGWRHTVTV 245
Query: 284 ISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKIL 342
S G+LYT+G ++ G LG G + P +++ + + Q++ GW+HT A++ +GK+
Sbjct: 246 SSSGDLYTYGWSKYGQLGHGDFEDHLVPHKLEA-LKDRFISQIAGGWRHTMAVAGDGKLY 304
Query: 343 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
WGW + GQ+G ++VD+ P V F + K QV+CG+ HT AL E
Sbjct: 305 GWGW------------NKFGQVGVADNVDHCSPVQVIFPDEQKVAQVACGWRHTLALTE 351
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 111/225 (49%), Gaps = 20/225 (8%)
Query: 19 KLGSKLGICKRWISSTLQRRFAAL-------WGNGDYGRLGLGSLESRWRPVVCSAFEKH 71
K+ + G+C + I++ + A L WG G YG LGLG R P S+ E
Sbjct: 171 KIHAFEGVCVKMIAAGAEHTAAILEDGDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGE 230
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QIST 130
+ +ACG HT+ ++ +G +Y G + +GQLG + + L P ++ LK + QI+
Sbjct: 231 KMVLVACGWRHTVTVSSSGDLYTYGWSKYGQLGHGDFEDH-LVPHKLEALKDRFISQIAG 289
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G+ H+ A+ DG+LY WG N GQ+G+ P+ +V Q A G+ ++
Sbjct: 290 GWRHTMAVAGDGKLYGWGWNKFGQVGVADNVDHCSPV--QVIFPDEQKVAQVACGWRHTL 347
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
A+T V SWG G SG+LGHG+ TP++I L
Sbjct: 348 ALTENKNVFSWGRGTSGQLGHGE---------IIDRNTPKMIDAL 383
>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
Length = 367
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/356 (33%), Positives = 169/356 (47%), Gaps = 53/356 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLNDFG 101
WG G+ G+LG G + P S ++++ CG +T+ + + G VY+ G DFG
Sbjct: 37 WGRGEDGQLGHGQADECLAPKAISTLTDAGIESVVCGAEYTIAVAPSRGQVYSWGWGDFG 96
Query: 102 QLGISE-NIGYSLEPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG + N + P+ SG + V +++ G H+ + +GEL+ +G+N NGQLGLG
Sbjct: 97 RLGHGDCNDVFVPRPIEFFSG--RPVHRVACGDTHTLVVAGEGELFTFGRNQNGQLGLGH 154
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P V L G + A G E S+A T G V SWG G G LG G+
Sbjct: 155 TNDCLSP--QLVVALQGERVRSVACGSEHSLAATESGTVFSWGWGRYGNLGDGE------ 206
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRA 266
S Y P + LEG+++ A G+ HSA + E+GRV+ FG DR
Sbjct: 207 ---SQDRYLPTRVVGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQLGHGDHTDRT 263
Query: 267 VDKMLFQEGNHARRPSLISG----------GELYTWGSNENGCLGIGSIDVLHSPERVQG 316
V + H R S+ G G LY WG N+ G LG+G SP V G
Sbjct: 264 VPCQVAAL-RHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDSSDRPSPVLVGG 322
Query: 317 PFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+ V V+CGW+HT A++E G++ +WG G GQLGHG + D
Sbjct: 323 ALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRG------------VNGQLGHGAEQD 366
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 126/306 (41%), Gaps = 48/306 (15%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
R S + V +S G HS AI G + WG+ +GQLG G+ A P + L+
Sbjct: 7 RSSEEEPGVTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQ--ADECLAPKAISTLTD 64
Query: 177 IFTKQAALGFEQSVAVTGG-GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
+ G E ++AV G+V SWG G GRLGHG + + + PR I+
Sbjct: 65 AGIESVVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDV---------FVPRPIEFF 115
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI----------- 284
G V A G H+ + G ++ FG ++ N P L+
Sbjct: 116 SGRPVHRVACGDTHTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSV 175
Query: 285 -----------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 333
G +++WG G LG G + P RV G + CGW+H+
Sbjct: 176 ACGSEHSLAATESGTVFSWGWGRYGNLGDGESQDRYLPTRVVG-LEGIRMVSAECGWRHS 234
Query: 334 AAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
A +SE G++ T+GW S GQLGHG+ D P V + + V+ G
Sbjct: 235 AVVSEDGRVFTFGW------------SKYGQLGHGDHTDRTVPCQVAALRHTRISSVAGG 282
Query: 393 FNHTGA 398
+ HT A
Sbjct: 283 WRHTMA 288
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 94/177 (53%), Gaps = 5/177 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LG G + R+ P E + + CG H+ ++E G V+ G + +GQ
Sbjct: 194 WGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQ 253
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ ++ P +++ L+ + ++ G+ H+ A G LY WG N GQLGLG +
Sbjct: 254 LGHGDHTDRTV-PCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDSS 312
Query: 162 AKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ P P V L+G G+ +VAVT GG+V SWG G +G+LGHG E +
Sbjct: 313 DR--PSPVLVGGALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVNGQLGHGAEQDL 367
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 106/243 (43%), Gaps = 46/243 (18%)
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
+ G SVA+ G V SWG G G+LGHGQ L P+ I L ++
Sbjct: 19 SCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECL---------APKAISTLTDAGIES 69
Query: 243 AAAGFLHS-ACIDENGRVYIFG-------------DRAVDKML-FQEGNHARRPS----- 282
G ++ A G+VY +G D V + + F G R +
Sbjct: 70 VVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFVPRPIEFFSGRPVHRVACGDTH 129
Query: 283 --LISG-GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE- 338
+++G GEL+T+G N+NG LG+G + SP+ V E V V+CG +H+ A +E
Sbjct: 130 TLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGER-VRSVACGSEHSLAATES 188
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + +WGWG G LG G D PT V E ++ + CG+ H+
Sbjct: 189 GTVFSWGWG------------RYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWRHSAV 236
Query: 399 LLE 401
+ E
Sbjct: 237 VSE 239
>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
Length = 353
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 163/329 (49%), Gaps = 52/329 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P V S F+ ++ ++ CG HT +E VY+ G DFG
Sbjct: 37 WGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHTTAYSEDELQVYSWGWGDFG 96
Query: 102 QL--GISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+L G S ++ ++ +P++ + GLK + QI+ G H A+T+ GE+ WG+N NGQLGLG
Sbjct: 97 RLGHGNSSDV-FTPQPVKALQGLK--IKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLG 153
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ +P K++ + K A G E + AVT G + WG G G LG G + L
Sbjct: 154 TTEDSL--LPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL 211
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P + +EG K+ + A G+ H+ + ++G
Sbjct: 212 ---------LPEKVSSVEGEKMVLVACGWRHTITVSDSGN-------------------- 242
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-S 337
LYT+G ++ G LG G + P +V+ +S + Q+S GW+HT A+ S
Sbjct: 243 ----------LYTYGWSKYGQLGHGDFEDHLVPHKVEA-LKDSTISQISGGWRHTMALTS 291
Query: 338 EGKILTWGWG--GSHGTFSEDGHSSGGQL 364
EGK+ WGW G G + D HSS GQ+
Sbjct: 292 EGKLYGWGWNKFGQVGVGNNDDHSSPGQV 320
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 132/301 (43%), Gaps = 48/301 (15%)
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
+ VV +S G HS A+ L WG+ +GQLG G ++ +PT +
Sbjct: 13 QTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRL--VPTVLSGFDAPAITSV 70
Query: 183 ALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
G + + A + +V SWG G GRLGHG S + +TP+ +K L+G+K+K
Sbjct: 71 ICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDV---------FTPQPVKALQGLKIK 121
Query: 242 IAAAGFLHSACIDENGRVYIFGDR---------AVDKMLFQE-------------GNHAR 279
A G H + G V +G D +L Q+
Sbjct: 122 QIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEH 181
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE- 338
++ G+LY WG G LG+G + PE+V E V V+CGW+HT +S+
Sbjct: 182 TAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMV-LVACGWRHTITVSDS 240
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+GW S GQLGHG+ D++ P V ++ Q+S G+ HT A
Sbjct: 241 GNLYTYGW------------SKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMA 288
Query: 399 L 399
L
Sbjct: 289 L 289
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 85/218 (38%), Gaps = 52/218 (23%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G SVA+ G + SWG G G+LGHG L P ++ + +
Sbjct: 21 GASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRL---------VPTVLSGFDAPAITSVI 71
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGS 304
G H+ E D++ ++Y+WG + G LG G+
Sbjct: 72 CGADHTTAYSE------------DEL-----------------QVYSWGWGDFGRLGHGN 102
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ +P+ V+ + Q++CG H A++ G++ +WG + GQ
Sbjct: 103 SSDVFTPQPVKA-LQGLKIKQIACGDSHCLAVTMAGEVQSWG------------RNQNGQ 149
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
LG G D + P + E+V ++ G HT A+ E
Sbjct: 150 LGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTE 187
>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
Length = 1053
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 171/362 (47%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P C FE ++ + CG HT+FL E G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + +P ++ L + +V +S G H+ A+ G+++ WG S+GQLGL
Sbjct: 64 GQLGHEKA---RKKPEQVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLS- 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P V+ LS + Q A G+ S+A+ GG++ SWG G+LG GQ+ + +
Sbjct: 120 IVEDCLRVPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGACVC 179
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+P++I+ L+G+ +AG HS FG
Sbjct: 180 --------SPQVIQSLQGIPFGQISAGGAHS-----------FG---------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+G D P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + ++P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTNHEVNPRKVFELMGSVVSQIACGRQHTLA 308
Query: 399 LL 400
+
Sbjct: 309 FI 310
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGLG + R PV+ + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L VV QI+ G H+ A I G++ +G NGQLG
Sbjct: 274 LG-HNSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGNGQLGTRST 332
Query: 161 AAKVIPIPTK 170
++ P P K
Sbjct: 333 CNRISPTPVK 342
>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Takifugu rubripes]
Length = 1042
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 167/361 (46%), Gaps = 59/361 (16%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P C F + + CG HT+FL + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + +P + L ++ V +S G H+ A+ G+++ WG S+GQLGL
Sbjct: 64 GQLGHEKP---RKKPEHVVALDAQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQLGLNN 120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + +P ++CLS + Q A G+ S A++ GG+V SWG G+LG G S +
Sbjct: 121 -FEECVRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIS 179
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
TP++I+ L+G+ +AG HS I +G V FG
Sbjct: 180 --------TPQIIQSLQGIPFAQLSAGGAHSFAITLSGAV--FG---------------- 213
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
WG N+ G LG+ + P ++ S+ V VSCG HTAA++ E
Sbjct: 214 ------------WGRNKFGQLGLNDTNDRWFPALLKSLRSQR-VIYVSCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q+SCG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTNHEINPRKVFELMGNIVTQISCGRQHTLA 308
Query: 399 L 399
Sbjct: 309 F 309
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S P + + + L+ GGAH+ +T +G V+ G N FG
Sbjct: 161 WGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ L S + V+ +S G H++A+T +G ++ +G GQLG
Sbjct: 221 QLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTN 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLG 210
++ P KV L G Q + G + ++A T GK+ S+G GG+G+LG
Sbjct: 281 HEI--NPRKVFELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGNGQLG 328
>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 443
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 117/379 (30%), Positives = 177/379 (46%), Gaps = 74/379 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LGL + + + P +K + G + ++ LT G VY+ G N G
Sbjct: 54 WGYGGFGQLGLQNENNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKNKGGI 113
Query: 103 LGISENIGYSL-EPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK- 159
LG + + +++ +P RI L K++ QIS G H +A+T DGE+Y WG G+LG +
Sbjct: 114 LGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEE 173
Query: 160 -KAAKVIPI---------------PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
K + I I P K+E L I KQ A G + +V ++ GKV ++G
Sbjct: 174 LKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSEDGKVYTFGY 233
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G LG+ + + S TP+LIK+L + VKI +AG+ A I + G++Y
Sbjct: 234 NQYGSLGYVSDQN--------SVTTPQLIKDLNDI-VKI-SAGYSFCAAITKQGKLY--- 280
Query: 264 DRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
TWG+N NG LG P V G S++ +
Sbjct: 281 ---------------------------TWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSI 313
Query: 324 DQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 382
VSCG AA++ +G++ TWG+GG GQLGHGN D P V F +
Sbjct: 314 VDVSCGDNFIAALTQQGQLYTWGFGGD------------GQLGHGNKSDLYAPRHVEFKQ 361
Query: 383 NVKALQVSCGFNHTGALLE 401
K ++++CG +H + E
Sbjct: 362 --KIIKIACGGSHAAFITE 378
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN G+LG + +P + + F ++S+ ++CG LT+ G +Y G G
Sbjct: 282 WGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDG 341
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG L R K+++++I+ G H++ IT D +LY +G+ S GQLG+G+
Sbjct: 342 QLGHGNK--SDLYAPRHVEFKQKIIKIACGGSHAAFITEDNQLYQFGRGSEGQLGIGQNV 399
Query: 162 AKVIPI---PTKVECLSGIFTKQAALGFEQSVAVT 193
A I P V+ G G E ++A+T
Sbjct: 400 ASEASIRSTPNLVQYFKGKQVVDVTCGGEHTIAIT 434
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 29 RWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
+I++ Q+ WG G G+LG G+ + P K + +ACGG+H F+TE
Sbjct: 321 NFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHVEF--KQKIIKIACGGSHAAFITE 378
Query: 89 TGCVYATGLNDFGQLGISENIGYSLE----PLRISGLK-KEVVQISTGYHHSSAITVD 141
+Y G GQLGI +N+ P + K K+VV ++ G H+ AIT +
Sbjct: 379 DNQLYQFGRGSEGQLGIGQNVASEASIRSTPNLVQYFKGKQVVDVTCGGEHTIAITQE 436
>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
Length = 928
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 167/362 (46%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G E
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 154/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
Length = 477
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 169/363 (46%), Gaps = 64/363 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ +YG+LG ES P ++ S + + +K + CGG H+ +T +G + G G
Sbjct: 13 WGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYGGCG 72
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+ + + R+ K V+ +S HS+AI DG LY WG N +G+LG+G
Sbjct: 73 QLGLGDLKDIVIP--RVMTSIKNVINVSCSDRHSAAILEDGRLYTWGCNKSGKLGIGSLN 130
Query: 162 AKVIP----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ P VE L + + G + +T K +WG G GRLGHG + +
Sbjct: 131 VNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLGHGDTNDV 190
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
YTP+LI+ L G+ VK G H+A + NG+VY G A K
Sbjct: 191 ---------YTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGK-------- 233
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 336
LG GS + ++ P+ +QG + + +VS G++H+A I
Sbjct: 234 ----------------------LGFGSKEDIYIPKLLQGSLTNKSIKEVSLGYQHSAVIT 271
Query: 337 SEGKILTWGWGGSHGTFSEDGHSSGGQLGH---GNDVDYIHPTIVNFGENVKALQVSCGF 393
++GK+ TWG GG+LGH G + D + P +V ++ A+ +SCG
Sbjct: 272 TKGKVYTWG--------------QGGRLGHIYNGPEPDILSPKLVEKLNSIIAVNISCGH 317
Query: 394 NHT 396
+HT
Sbjct: 318 SHT 320
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 87/176 (49%), Gaps = 8/176 (4%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A WG G GRLG G + P + + S+K + CGG HT L G VY G
Sbjct: 171 AYTWGLGMQGRLGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGA 230
Query: 100 FGQLGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG- 156
FG+LG E+I Y + L+ S K + ++S GY HS+ IT G++Y WG+ G+LG
Sbjct: 231 FGKLGFGSKEDI-YIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWGQ--GGRLGH 287
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+ I P VE L+ I + G +V ++ G V +WG + LGHG
Sbjct: 288 IYNGPEPDILSPKLVEKLNSIIAVNISCGHSHTVVISNIGDVYAWGV--TRNLGHG 341
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 115/262 (43%), Gaps = 64/262 (24%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSWGAGG 205
WG + GQLG + + + P +E L K+ G S +T G+++ WG GG
Sbjct: 13 WGSSEYGQLGAIYEESNIEP--KLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYGG 70
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LG G I+ PR++ ++ V + ++ + HSA I E+GR
Sbjct: 71 CGQLGLGDLKDIV---------IPRVMTSIKNV-INVSCSDR-HSAAILEDGR------- 112
Query: 266 AVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH------SPERVQGPFS 319
LYTWG N++G LGIGS++V +P+ V+ +
Sbjct: 113 -----------------------LYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEKLLN 149
Query: 320 ESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
E V +VSCG HTA +++ K TWG G G+LGHG+ D P ++
Sbjct: 150 EK-VIKVSCGSFHTACLTDLNKAYTWGLGMQ------------GRLGHGDTNDVYTPKLI 196
Query: 379 NFGENVKALQVSCGFNHTGALL 400
+ + CG +HT LL
Sbjct: 197 ESLAGLSVKNIVCGGHHTAILL 218
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 83/212 (39%), Gaps = 62/212 (29%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSACIDEN 256
V++WG+ G+LG E S P+LI+ L ++K G HSA I +
Sbjct: 10 VVAWGSSEYGQLGAIYEES---------NIEPKLIESLYSFNRIKEVCCGGHHSAVITHS 60
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
G EL WG G LG+G + + P RV
Sbjct: 61 G------------------------------ELIVWGYGGCGQLGLGDLKDIVIP-RVMT 89
Query: 317 PFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH- 374
V VSC +H+AAI E G++ TWG S G+LG G+ ++
Sbjct: 90 SIKN--VINVSCSDRHSAAILEDGRLYTWGCNKS------------GKLGIGSLNVNLNN 135
Query: 375 -----PTIVNFGENVKALQVSCGFNHTGALLE 401
P +V N K ++VSCG HT L +
Sbjct: 136 NIICTPQLVEKLLNEKVIKVSCGSFHTACLTD 167
>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
Length = 376
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 165/368 (44%), Gaps = 61/368 (16%)
Query: 41 ALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLND 99
A WG G+ G+LG G + P +A + A+ CG +T+ + + G +Y+ G D
Sbjct: 32 ASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVVCGAEYTVAVASSRGQIYSWGWGD 91
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV-DGELYMWGKNSNGQLGL 157
FG+LG E G P I+ + V +++ G H+ +T DG LY +G+N NGQLGL
Sbjct: 92 FGRLGHGE-CGDVFVPRPIAFFSGRPVARVACGDTHTLVVTQGDGALYTFGRNQNGQLGL 150
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P V L G A G E S+A T G V SWG G G LG G
Sbjct: 151 GHTNDCL--SPQLVTALQGERVSSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGD---- 204
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S YTP + L+GV V G+ HSA + + GRV+ FG ++ +
Sbjct: 205 -----SQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDHVD 259
Query: 278 ARRPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQ 315
RP L++G G LY WG N+ G LG+G + +P V
Sbjct: 260 HTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTPVA 319
Query: 316 G-----------PFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 363
G + V ++CGW+HT A++E G++ +WG G GQ
Sbjct: 320 GFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRG------------VNGQ 367
Query: 364 LGHGNDVD 371
LGHG + D
Sbjct: 368 LGHGAEQD 375
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 133/302 (44%), Gaps = 49/302 (16%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+ V+ +S G HS A+ G + WG+ +GQLG G+ A PT + L+
Sbjct: 9 EARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQ--ADQCTSPTCIAALTDAGVDA 66
Query: 182 AALGFEQSVAVTGG-GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
G E +VAV G++ SWG G GRLGHG+ + + PR I G V
Sbjct: 67 VVCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDV---------FVPRPIAFFSGRPV 117
Query: 241 KIAAAGFLHSACIDE-NGRVYIFGDRAVDKMLFQEGNHARRPSLISG------------- 286
A G H+ + + +G +Y FG ++ N P L++
Sbjct: 118 ARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVACGS 177
Query: 287 ---------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
G +++WG G LG G ++P RV G V V CGW+H+A ++
Sbjct: 178 EHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVG-LDGVTVTSVVCGWRHSAVVT 236
Query: 338 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
EG++ T+GW S GQLGHG+ VD+ P +V ++ + V+ G+ HT
Sbjct: 237 DEGRVFTFGW------------SKYGQLGHGDHVDHTRPCLVAGLQHCRVSTVAGGWRHT 284
Query: 397 GA 398
A
Sbjct: 285 MA 286
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 96/186 (51%), Gaps = 12/186 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LG G + R+ P + ++ ++ CG H+ +T+ G V+ G + +GQ
Sbjct: 192 WGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQ 251
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG +++ ++ P ++GL+ V ++ G+ H+ A +G LY WG N GQLGLG
Sbjct: 252 LGHGDHVDHT-RPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSE 310
Query: 162 AKVIPIPTK-------VECLSGIFTKQAAL---GFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+ P P ++ AL G+ +VAVT G+V SWG G +G+LGH
Sbjct: 311 DRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGVNGQLGH 370
Query: 212 GQESSI 217
G E +
Sbjct: 371 GAEQDL 376
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 83/219 (37%), Gaps = 49/219 (22%)
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
+ G S+A+ G V SWG G G+LGHGQ +P I L V
Sbjct: 16 SCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCT---------SPTCIAALTDAGVDA 66
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGI 302
G ++ + S G++Y+WG + G LG
Sbjct: 67 VVCGAEYTVAVAS-----------------------------SRGQIYSWGWGDFGRLGH 97
Query: 303 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
G + P + FS PV +V+CG HT +++G G G + G
Sbjct: 98 GECGDVFVPRPI-AFFSGRPVARVACGDTHTLVVTQGD----------GALYTFGRNQNG 146
Query: 363 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QLG G+ D + P +V + + V+CG H+ A E
Sbjct: 147 QLGLGHTNDCLSPQLVTALQGERVSSVACGSEHSLAATE 185
>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
Length = 1057
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 167/362 (46%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G E
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 154/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
adamanteus]
Length = 1052
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 168/362 (46%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P CS F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ P ++ L + +V +S G H+ A+ G++Y WG +GQLGL
Sbjct: 64 GQLGHEKS---RKRPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLS- 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ LS I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P++IK L G+ AAG HS + +G V FG
Sbjct: 177 -----KQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAV--FG---------------- 213
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
WG N+ G LG+ + + P ++ S+ V +SCG HTAA++ E
Sbjct: 214 ------------WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YISCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTAHEINPRKVFELMGNIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 149/327 (45%), Gaps = 58/327 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR RP A + ++ ++CG AHTL L + G VYA G GQL
Sbjct: 59 GCNDLGQLG--HEKSRKRPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+S Y+ P I L ++VQ++ GY HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G V WG G+LG E+
Sbjct: 177 KQAS-PQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ + G H+A + + G V+ FG
Sbjct: 229 --DRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFG------------------- 267
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+GG G LG S +P +V + V Q++CG +HT+A S G+
Sbjct: 268 --AGGY---------GQLGHNSTAHEINPRKV-FELMGNIVTQIACGRQHTSAFVPSTGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHG 367
I ++G GG+ GQLG G
Sbjct: 316 IYSFGLGGN------------GQLGMG 330
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G V+ G N FG
Sbjct: 161 WGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V IS G H++A+T +G ++ +G GQLG A
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTA 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGTTSN 334
>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
Length = 1049
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 167/362 (46%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G E
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 154/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
Length = 546
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 167/362 (46%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G E
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 154/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
Length = 928
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 167/362 (46%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V ++ G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V QV+CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A+ACG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V QV+CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQVACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
Length = 1057
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 167/362 (46%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V ++ G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V QV+CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A+ACG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V QV+CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQVACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
Length = 1057
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 167/362 (46%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V ++ G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V QV+CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A+ACG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V QV+CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQVACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
Length = 546
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 167/362 (46%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V ++ G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V QV+CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A+ACG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V QV+CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQVACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
Length = 1049
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 167/362 (46%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V ++ G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V QV+CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A+ACG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V QV+CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQVACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
Length = 1066
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 167/362 (46%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 13 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 72
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V ++ G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 73 GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 128
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 129 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 181
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 182 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 213
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 214 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 269
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V QV+CG HT A
Sbjct: 270 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSA 317
Query: 399 LL 400
+
Sbjct: 318 FV 319
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A+ACG AHTL L + G VYA GL+ GQL
Sbjct: 68 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 125
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 126 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 185
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 186 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 237
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 238 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 295
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V QV+CG +HT+A S G+
Sbjct: 296 KVF--EL------------MGSI-----------------VTQVACGRQHTSAFVPSSGR 324
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 325 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 350
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 170 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 229
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 230 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 289
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 290 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 343
>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Cricetulus griseus]
Length = 1057
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V QV+CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 154/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VY+ GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + Y P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V QV+CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQVACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Cricetulus griseus]
Length = 1049
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V QV+CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 154/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VY+ GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + Y P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V QV+CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQVACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Monodelphis domestica]
Length = 1049
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 168/362 (46%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +++GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I +P ++ L+ I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE----- 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L+S S P+LIK L G+ AAG HS
Sbjct: 175 -LKSQS--APQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 155/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ Y P I L ++VQI+ GY+HS A++ E++ WG+N +GQLGLG +
Sbjct: 117 GLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE-L 175
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 176 KSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG L+S+ P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Monodelphis domestica]
Length = 1057
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 168/362 (46%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +++GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I +P ++ L+ I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE----- 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L+S S P+LIK L G+ AAG HS
Sbjct: 175 -LKSQS--APQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 155/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ Y P I L ++VQI+ GY+HS A++ E++ WG+N +GQLGLG +
Sbjct: 117 GLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE-L 175
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 176 KSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG L+S+ P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
Length = 1049
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 167/362 (46%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V SWG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 173 -IDCNKQASPQLIKSLTGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ ++ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 154/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCN 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L+GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS-PQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 92/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
Length = 835
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V QV+CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 154/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VY+ GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + Y P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V QV+CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQVACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 364
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/360 (32%), Positives = 163/360 (45%), Gaps = 55/360 (15%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G GD G+LG+G P S + +A HT FLT+ G VY TG ND GQL
Sbjct: 8 GRGDLGQLGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSNDAGQL 67
Query: 104 GISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + + P+R++ L +V I+ G+ H+ A+T G L WG + GQLG
Sbjct: 68 GV-RGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLGFDSGNI 126
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P V+ + + A G ++A+TG G V S+G G SG LGHG L
Sbjct: 127 VDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGN-------LD 179
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
S TP L+K L G+ V A G HSA + +G+V+
Sbjct: 180 GCS--TPSLVKSLWGLGVTQIACGENHSAALTVDGKVF---------------------- 215
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 341
TWG + G LG GS + P V+ + V Q++CG HT AI S+G++
Sbjct: 216 --------TWGRGKYGQLGHGSTQNIKLPVAVK-ALVDHDVIQIACGGDHTLAITSDGRL 266
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+WG HG + GQ GHG D + P V+ E +QVS G HT LL+
Sbjct: 267 FSWG----HGLW--------GQTGHGTKEDVLSPKQVHQLEGRVLVQVSAGARHTVVLLD 314
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 117/226 (51%), Gaps = 13/226 (5%)
Query: 41 ALWGNGDYGRLGL--GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
A WG +YG+LG G++ +P + +A GG HTL LT +G VY+ G
Sbjct: 109 ASWGGDEYGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDG 168
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG G S L S V QI+ G +HS+A+TVDG+++ WG+ GQLG G
Sbjct: 169 SSGALGHGNLDGCSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHG 228
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ + I +P V+ L Q A G + ++A+T G++ SWG G G+ GHG + +L
Sbjct: 229 --STQNIKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVL 286
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
+P+ + +LEG + +AG H+ + + G VY +GD
Sbjct: 287 ---------SPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGD 323
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 135/282 (47%), Gaps = 35/282 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ D G+LG+ +E + P+ +A + H + +ACG HT+ +TETG + + G +++GQL
Sbjct: 60 GSNDAGQLGVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQL 119
Query: 104 GI-SENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G S NI ++P + G + +++ G +H+ A+T G++Y +G S+G LG G
Sbjct: 120 GFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLD 179
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P+ V+ L G+ Q A G S A+T GKV +WG G G+LGHG +I
Sbjct: 180 G--CSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNI---- 233
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD----------------- 264
P +K L V A G H+ I +GR++ +G
Sbjct: 234 -----KLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSP 288
Query: 265 ----RAVDKMLFQEGNHARRPS-LISGGELYTWGSNENGCLG 301
+ ++L Q AR L+ GE+Y WG E LG
Sbjct: 289 KQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQRQLG 330
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 81/169 (47%), Gaps = 4/169 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+G G LG G+L+ P + + + +ACG H+ LT G V+ G +GQ
Sbjct: 165 FGDGSSGALGHGNLDGCSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQ 224
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG L P+ + L +V+QI+ G H+ AIT DG L+ WG GQ G G K
Sbjct: 225 LGHGSTQNIKL-PVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTK- 282
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+ + P +V L G Q + G +V + G+V WG +LG
Sbjct: 283 -EDVLSPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQRQLG 330
>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
garnettii]
Length = 1049
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L + +P+LIK L G+ AAG HS
Sbjct: 173 -LDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
Length = 1057
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V ++ G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q +CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQAACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 135/297 (45%), Gaps = 36/297 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A+ACG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LI-----------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
+ S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G QAA G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
latipes]
Length = 1059
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 167/362 (46%), Gaps = 61/362 (16%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P C F ++ + CG HT FL E G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G+++ WG S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLN- 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I +P ++ LS + Q A G+ S+A++ GG + SWG G+LG G
Sbjct: 120 NFEECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ S P+ ++ L+G+ AAG HS
Sbjct: 173 -MTGQSISVPQHLQSLQGIPFAQIAAGGAHSF---------------------------- 203
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
+L G ++ WG N+ G LG+ + P ++ S+ V +SCG HTAA++ E
Sbjct: 204 --ALTLSGAVFGWGRNKFGQLGLNDTNDRCFPALLKALRSQR-VIYISCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP-TIVNFGENVKALQVSCGFNHTG 397
G + T+G GG GQLGH + ++P + NV Q++CG HT
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTNHEVNPRKVFELMGNV-VTQIACGRQHTL 307
Query: 398 AL 399
A
Sbjct: 308 AF 309
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG +S P + + +A GGAH+ LT +G V+ G N FG
Sbjct: 161 WGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ L + + V+ IS G H++A+T +G ++ +G GQLG
Sbjct: 221 QLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTN 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLG 210
+V P KV L G Q A G + ++A T GK+ S+G GG+G+LG
Sbjct: 281 HEV--NPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLG 328
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R P + A + ++CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L VV QI+ G H+ A T G++ +G NGQLG
Sbjct: 274 LG-HNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLGTRST 332
Query: 161 AAKVIPIPTK 170
+ P P K
Sbjct: 333 CNRKSPAPVK 342
>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Anolis carolinensis]
Length = 1060
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 168/362 (46%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P C+ F +++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ P ++ L + +V +S G H+ + G++Y WG ++GQLGL
Sbjct: 64 GQLGHEKS---RKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ LS + Q A G+ S+A++ G +V SWG G+LG G +
Sbjct: 120 GTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS
Sbjct: 177 -----KQTSPQLIKSLLGIPFGQIAAGGAHSF---------------------------- 203
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
+L G ++ WG N+ G LG+ + + P ++ S+ V +SCG HTAA++ E
Sbjct: 204 --ALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YISCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 138/299 (46%), Gaps = 36/299 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR RP A + ++ A++CG AHTL L + G VYA G GQL
Sbjct: 59 GCNDLGQLG--HEKSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ Y+ P I L ++VQ++ GY+HS A++ E++ WG+N +GQLGLG
Sbjct: 117 GLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S A+T G V WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ + G H+A + + G V+ FG ++ H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPR 286
Query: 283 LI-----------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
+ S G +Y++G NG LG+GS SP V+G F
Sbjct: 287 KVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPVKGNF 345
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG L+ + P + + +A GGAH+ LT +G V+ G N FG
Sbjct: 161 WGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V IS G H++A+T +G ++ +G GQLG
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTG 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSN 334
>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Anolis carolinensis]
Length = 1052
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 168/362 (46%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P C+ F +++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ P ++ L + +V +S G H+ + G++Y WG ++GQLGL
Sbjct: 64 GQLGHEKS---RKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ LS + Q A G+ S+A++ G +V SWG G+LG G +
Sbjct: 120 GTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS
Sbjct: 177 -----KQTSPQLIKSLLGIPFGQIAAGGAHSF---------------------------- 203
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
+L G ++ WG N+ G LG+ + + P ++ S+ V +SCG HTAA++ E
Sbjct: 204 --ALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YISCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 138/299 (46%), Gaps = 36/299 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR RP A + ++ A++CG AHTL L + G VYA G GQL
Sbjct: 59 GCNDLGQLG--HEKSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ Y+ P I L ++VQ++ GY+HS A++ E++ WG+N +GQLGLG
Sbjct: 117 GLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S A+T G V WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ + G H+A + + G V+ FG ++ H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPR 286
Query: 283 LI-----------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
+ S G +Y++G NG LG+GS SP V+G F
Sbjct: 287 KVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPVKGNF 345
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG L+ + P + + +A GGAH+ LT +G V+ G N FG
Sbjct: 161 WGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V IS G H++A+T +G ++ +G GQLG
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTG 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSN 334
>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
Length = 487
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 176/375 (46%), Gaps = 64/375 (17%)
Query: 34 TLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCV 92
L + +WG+ +YG+ G E P + S+ ++CG ++ +T +G +
Sbjct: 4 NLSKSGVVVWGSSEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDL 63
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
G GQLG N+ L P R++ K VVQ++ H++AI +GELY WG + N
Sbjct: 64 ILWGYGGCGQLGFG-NLEDCLVP-RVNLSLKNVVQVACSDRHTAAILSNGELYTWGCSKN 121
Query: 153 GQLGLGK----KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
G+LG G+ + V+ P KV+ L G Q + G + +T K L+WG G GR
Sbjct: 122 GKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGR 181
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG I +TP+LI+ L G+ +K + G H+A + G++Y+FG A
Sbjct: 182 LGHGDTQDI---------FTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFG 232
Query: 269 KMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 328
K LG GS D + P ++GP + + +VS
Sbjct: 233 K------------------------------LGFGSTDDVLIPRLLEGPLEDIQITKVSL 262
Query: 329 GWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGH---GNDVDYIHPTIVNFGENV 384
G +H+AA+++ GK+ TWG GG+LGH G + D++ P ++ E
Sbjct: 263 GSQHSAAVTKCGKVYTWG--------------QGGRLGHIFNGPEHDFLSPKRLSNLEKA 308
Query: 385 KALQVSCGFNHTGAL 399
+ +SCG +H+ AL
Sbjct: 309 FIVDISCGNSHSVAL 323
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 169/372 (45%), Gaps = 76/372 (20%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWG G G+LG G+LE P V + + ++ +AC HT + G +Y G + G
Sbjct: 65 LWGYGGCGQLGFGNLEDCLVPRVNLSLK--NVVQVACSDRHTAAILSNGELYTWGCSKNG 122
Query: 102 QLG-------ISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNG 153
+LG IS N+ +P+++ L+ E V+Q+S G +H+ +T D + WG G
Sbjct: 123 KLGHGQFELSISNNV--VSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQG 180
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+LG G + I P +E L+G+ K+ + G + + GK+ +G G G+LG G
Sbjct: 181 RLGHGD--TQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGS 238
Query: 214 ESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
+L PRL++ LE +++ + G HSA + + G+VY +G
Sbjct: 239 TDDVL---------IPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWG--------- 280
Query: 273 QEGNHARRPSLISGGEL-YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 331
GG L + + E+ L SP+R+ ++ + +SCG
Sbjct: 281 ------------QGGRLGHIFNGPEHDFL---------SPKRLSN-LEKAFIVDISCGNS 318
Query: 332 HTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN---FGENVKAL 387
H+ A+S+ G I TWG + +GHG + IHP + + +N +
Sbjct: 319 HSVALSDVGDIYTWGMTKN--------------IGHG--IQGIHPNMPSKHPILQNKNIV 362
Query: 388 QVSCGFNHTGAL 399
QV C +H+ AL
Sbjct: 363 QVVCSSSHSIAL 374
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 114/265 (43%), Gaps = 64/265 (24%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWG 202
+ +WG + GQ G K +V P P V+ L + + + + G S A+T G ++ WG
Sbjct: 10 VVVWGSSEYGQHG--SKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWG 67
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
GG G+LG G L PR V ++ + AC D +
Sbjct: 68 YGGCGQLGFGNLEDCL---------VPR---------VNLSLKNVVQVACSDRH------ 103
Query: 263 GDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG------SIDVLHSPERVQG 316
+++S GELYTWG ++NG LG G S +V+ P +V+
Sbjct: 104 -----------------TAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKA 146
Query: 317 PFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
E V QVSCG HT +++ K LTWG G G+LGHG+ D P
Sbjct: 147 LEGEK-VIQVSCGSYHTGCLTDDKKALTWGLGLQ------------GRLGHGDTQDIFTP 193
Query: 376 TIVNFGENVKALQVSCGFNHTGALL 400
++ + ++SCG +HT LL
Sbjct: 194 KLIESLAGLPIKEISCGGHHTAILL 218
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 6/177 (3%)
Query: 38 RFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+ A WG G GRLG G + + P + + +K ++CGG HT L TG +Y G
Sbjct: 169 KKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGG 228
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
FG+LG + L L+ ++ ++S G HS+A+T G++Y WG+ G+LG
Sbjct: 229 GAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQ--GGRLG 286
Query: 157 -LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+ P ++ L F + G SVA++ G + +WG + +GHG
Sbjct: 287 HIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGM--TKNIGHG 341
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 62/127 (48%), Gaps = 22/127 (17%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGK 340
++ + G+L WG G LG G+++ P RV S V QV+C +HTAAI S G+
Sbjct: 56 AITNSGDLILWGYGGCGQLGFGNLEDCLVP-RVN--LSLKNVVQVACSDRHTAAILSNGE 112
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFN 394
+ TWG S G+LGHG I +V+ VKAL QVSCG
Sbjct: 113 LYTWGC------------SKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSY 160
Query: 395 HTGALLE 401
HTG L +
Sbjct: 161 HTGCLTD 167
>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
Length = 1057
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 167/362 (46%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q + G+ S+A++ +V SWG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ+S GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Sarcophilus harrisii]
Length = 1057
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 168/362 (46%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +++GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I +P ++ L+ I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE----- 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L+ S +P+LIK L G+ AAG HS
Sbjct: 175 -LKRQS--SPQLIKSLLGIPFTQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 155/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ Y P I L ++VQI+ GY+HS A++ E++ WG+N +GQLGLG +
Sbjct: 117 GLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 RQ-SSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG L+ + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Sarcophilus harrisii]
Length = 979
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 168/362 (46%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +++GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I +P ++ L+ I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE----- 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L+ S +P+LIK L G+ AAG HS
Sbjct: 175 -LKRQS--SPQLIKSLLGIPFTQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 155/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ Y P I L ++VQI+ GY+HS A++ E++ WG+N +GQLGLG +
Sbjct: 117 GLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 RQ-SSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG L+ + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Sarcophilus harrisii]
Length = 1049
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 168/362 (46%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +++GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I +P ++ L+ I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE----- 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L+ S +P+LIK L G+ AAG HS
Sbjct: 175 -LKRQS--SPQLIKSLLGIPFTQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 155/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ Y P I L ++VQI+ GY+HS A++ E++ WG+N +GQLGLG +
Sbjct: 117 GLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 RQ-SSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG L+ + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
Length = 1054
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L +++Q++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1049
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
Length = 1057
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L +++Q++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Papio anubis]
Length = 1057
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L +++Q++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Papio anubis]
Length = 1049
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L +++Q++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
mulatta]
Length = 1049
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L +++Q++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Saimiri boliviensis boliviensis]
Length = 1057
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
Length = 1057
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
jacchus]
Length = 1049
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Saimiri boliviensis boliviensis]
Length = 979
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
Length = 1049
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Callithrix jacchus]
Length = 979
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Papio anubis]
Length = 979
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L +++Q++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Nomascus leucogenys]
Length = 1049
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS
Sbjct: 177 -----KQTSPQLLKSLVGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Callithrix jacchus]
Length = 1057
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Nomascus leucogenys]
Length = 1057
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS
Sbjct: 177 -----KQTSPQLLKSLVGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pan paniscus]
gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
II]
Length = 487
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 176/375 (46%), Gaps = 64/375 (17%)
Query: 34 TLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCV 92
L + +WG+ +YG+ G E P + S+ ++CG ++ +T +G +
Sbjct: 4 NLSKSGVVVWGSTEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDL 63
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
G GQLG N+ L P R++ K V+Q++ H++AI +GELY WG + N
Sbjct: 64 ILWGYGGCGQLGFG-NLEDCLVP-RVNLSLKNVIQVACSDRHTAAILSNGELYTWGCSKN 121
Query: 153 GQLGLGK----KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
G+LG G+ + V+ P KV+ L G Q + G + +T K L+WG G GR
Sbjct: 122 GKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGR 181
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG I +TP+LI+ L G+ +K + G H+A + G++Y+FG A
Sbjct: 182 LGHGDTQDI---------FTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFG 232
Query: 269 KMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 328
K LG GS D + P ++GP + + +VS
Sbjct: 233 K------------------------------LGFGSTDDVLIPRLLEGPLEDIQITKVSL 262
Query: 329 GWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGH---GNDVDYIHPTIVNFGENV 384
G +H+AA+++ GK+ TWG GG+LGH G + D++ P ++ E
Sbjct: 263 GSQHSAAVTKCGKVYTWG--------------QGGRLGHIFNGPEHDFLSPKRLSNLEKA 308
Query: 385 KALQVSCGFNHTGAL 399
+ +SCG +H+ AL
Sbjct: 309 FIVDISCGNSHSVAL 323
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 168/372 (45%), Gaps = 76/372 (20%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWG G G+LG G+LE P V + + ++ +AC HT + G +Y G + G
Sbjct: 65 LWGYGGCGQLGFGNLEDCLVPRVNLSLK--NVIQVACSDRHTAAILSNGELYTWGCSKNG 122
Query: 102 QLG-------ISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNG 153
+LG IS N+ +P+++ L+ E V+Q+S G +H+ +T D + WG G
Sbjct: 123 KLGHGQFELSISNNVVS--QPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQG 180
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+LG G + I P +E L+G+ K+ + G + + GK+ +G G G+LG G
Sbjct: 181 RLGHGD--TQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGS 238
Query: 214 ESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
+L PRL++ LE +++ + G HSA + + G+VY +G
Sbjct: 239 TDDVL---------IPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWG--------- 280
Query: 273 QEGNHARRPSLISGGEL-YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 331
GG L + + E+ L SP+R+ VD +SCG
Sbjct: 281 ------------QGGRLGHIFNGPEHDFL---------SPKRLSNLEKAFIVD-ISCGNS 318
Query: 332 HTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN---FGENVKAL 387
H+ A+S+ G I TWG + +GHG + IHP + + +N +
Sbjct: 319 HSVALSDVGDIYTWGMTKN--------------IGHG--IQGIHPNMPSKHPILQNKNIV 362
Query: 388 QVSCGFNHTGAL 399
QV C +H+ AL
Sbjct: 363 QVVCSSSHSIAL 374
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 113/265 (42%), Gaps = 64/265 (24%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWG 202
+ +WG GQ G K +V P P V+ L + + + + G S A+T G ++ WG
Sbjct: 10 VVVWGSTEYGQHG--SKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWG 67
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
GG G+LG G L PR V ++ + AC D +
Sbjct: 68 YGGCGQLGFGNLEDCL---------VPR---------VNLSLKNVIQVACSDRH------ 103
Query: 263 GDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG------SIDVLHSPERVQG 316
+++S GELYTWG ++NG LG G S +V+ P +V+
Sbjct: 104 -----------------TAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKA 146
Query: 317 PFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
E V QVSCG HT +++ K LTWG G G+LGHG+ D P
Sbjct: 147 LEGEK-VIQVSCGSYHTGCLTDDKKALTWGLGLQ------------GRLGHGDTQDIFTP 193
Query: 376 TIVNFGENVKALQVSCGFNHTGALL 400
++ + ++SCG +HT LL
Sbjct: 194 KLIESLAGLPIKEISCGGHHTAILL 218
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 6/177 (3%)
Query: 38 RFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+ A WG G GRLG G + + P + + +K ++CGG HT L TG +Y G
Sbjct: 169 KKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGG 228
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
FG+LG + L L+ ++ ++S G HS+A+T G++Y WG+ G+LG
Sbjct: 229 GAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQ--GGRLG 286
Query: 157 -LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+ P ++ L F + G SVA++ G + +WG + +GHG
Sbjct: 287 HIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGM--TKNIGHG 341
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 62/127 (48%), Gaps = 22/127 (17%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGK 340
++ + G+L WG G LG G+++ P RV S V QV+C +HTAAI S G+
Sbjct: 56 AITNSGDLILWGYGGCGQLGFGNLEDCLVP-RVN--LSLKNVIQVACSDRHTAAILSNGE 112
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFN 394
+ TWG S G+LGHG I +V+ VKAL QVSCG
Sbjct: 113 LYTWGC------------SKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSY 160
Query: 395 HTGALLE 401
HTG L +
Sbjct: 161 HTGCLTD 167
>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Pan troglodytes]
gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Nomascus leucogenys]
Length = 979
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS
Sbjct: 177 -----KQTSPQLLKSLVGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
[Pan troglodytes]
gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1036
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/355 (31%), Positives = 165/355 (46%), Gaps = 61/355 (17%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P C F + + CG HT+FL + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P + L ++ V +S G H+ A+ G+++ WG SNGQLGL
Sbjct: 64 GQLGHEKS---RKKPEHVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNN 120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + +P ++CLS + Q A G+ S A++ GG+V SWG G+LG G S +
Sbjct: 121 -FEECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIS 179
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
TP++I+ L+G+ +AG HS I +G V FG
Sbjct: 180 --------TPQIIQSLQGIPFAQLSAGGAHSFAITLSGAV--FG---------------- 213
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
WG N+ G LG+ P ++ S+ V VSCG HTAA+++
Sbjct: 214 ------------WGKNKFGQLGLNDTKDRWFPALLKSLRSQR-VIFVSCGEDHTAALTKL 260
Query: 340 K-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP-TIVNFGENVKALQVSCG 392
+ + T+G GG GQLGH I+P + NV Q+SCG
Sbjct: 261 RGVFTFGAGGY------------GQLGHNCTNHEINPRKVFELMGNV-VTQISCG 302
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 110/295 (37%), Gaps = 83/295 (28%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +++ P K E G G + +V + G V + G
Sbjct: 4 WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH + S P + L+ + + G H+ +++ G+V+
Sbjct: 64 GQLGHEK-----------SRKKPEHVVALDAQIIVAVSCGESHTLALNDKGQVF------ 106
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
+WG NG LG+ + + R S+ + QV
Sbjct: 107 ------------------------SWGLGSNGQLGLNNFEECVRVPRNIKCLSDVQIAQV 142
Query: 327 SCGWKHTAAISE-GKILTWGWG-------GSHGT---------------FSED------- 356
+CG+ H+ A+S+ G++ +WG G HG+ F++
Sbjct: 143 ACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHS 202
Query: 357 ------------GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G + GQLG + D P ++ + + + VSCG +HT AL
Sbjct: 203 FAITLSGAVFGWGKNKFGQLGLNDTKDRWFPALLKSLRSQRVIFVSCGEDHTAAL 257
>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pan paniscus]
gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Loxodonta africana]
Length = 1057
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ L+ I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L + +P+L+K L G+ AAG HS
Sbjct: 173 -LDCKKQASPKLLKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS-PKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
guttata]
Length = 991
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 164/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + P + L + +V +S G H+ A+ G++Y WG ++GQLGL
Sbjct: 64 GQLGHEKA---RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + +P + LS I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYE----- 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + TS P++IK L G+ AAG HS
Sbjct: 175 YKKQTS---PQMIKSLLGIPFAQIAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRSQKVV-HICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSVVTQITCGRQHTTA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 151/338 (44%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG ++R RP A + ++ A++CG AHTL L + G VYA GL GQL
Sbjct: 59 GCNDLGQLG--HEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ P I L + ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG ++
Sbjct: 177 KQTS-PQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L KV G H+A + + G V+ FG
Sbjct: 229 --DRYVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFG------------------- 267
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+GG G LG S +P +V S V Q++CG +HT A S G+
Sbjct: 268 --AGG---------YGQLGHNSTSHEINPRKV-FELMGSVVTQITCGRQHTTAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGTTSNRKSPFTV 341
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG++++ + L S ++VV I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDDNDRYVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSN 334
>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Ailuropoda melanoleuca]
gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
Length = 1057
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ ++ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Canis lupus familiaris]
Length = 1057
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ ++ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
3 [Ailuropoda melanoleuca]
Length = 1054
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ ++ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Ailuropoda melanoleuca]
Length = 1049
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ ++ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Canis lupus familiaris]
Length = 1049
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ ++ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
multifiliis]
Length = 427
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 180/390 (46%), Gaps = 74/390 (18%)
Query: 31 ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
+ T ++ WG G++G+LGL + +++ P ++ + + ++ L++ G
Sbjct: 36 FTDTPPQKTVYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNIIKVKANKSVSMALSQDG 95
Query: 91 CVYATGLNDFGQLGISENIGYSL-EPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWG 148
VY G N G LG + +++ +P + L+ ++ QIS G H +AI+ DGELY WG
Sbjct: 96 KVYTWGKNKGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWG 155
Query: 149 KNSNGQLG--LGKKAAKV--------------IPIPTKVECLSGIFTKQAALGFEQSVAV 192
+G+LG + +K+ KV +PTKV+ L+GI KQ + G + +V +
Sbjct: 156 NKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVL 215
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V S+G G+LG+ E T + P+ I +L+ + + I G SA
Sbjct: 216 TENGEVYSFGNSMKGQLGYQSE--------ETGNFQPKKIPDLQNI-INI-DCGQQFSAA 265
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ +G+V YTWG+N++G LG P
Sbjct: 266 VSSSGKV------------------------------YTWGNNDHGQLGNNQSIYQARPN 295
Query: 313 RVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+V G F + + +SCG AA+S EGK+ TWG+G GQLGH N D
Sbjct: 296 QVTG-FGGNKIINISCGDNFIAALSNEGKLFTWGYGND------------GQLGHSNRND 342
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGALLE 401
P + F E K ++V CG HT L +
Sbjct: 343 LYAPKQIEFKE--KIIKVDCGGTHTAFLTQ 370
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG + + P EK + + CGG HT FLT+ +Y G + GQ
Sbjct: 327 WGYGNDGQLGHSNRNDLYAPKQIEFKEK--IIKVDCGGTHTAFLTQNNQLYLFGRGNEGQ 384
Query: 103 LGISENI----GYSLEPLRISGLKK-EVVQISTGYHHSSAIT 139
LGI ENI P + KK +VV ++ G ++ AIT
Sbjct: 385 LGIGENIESEAAIRTTPKIVEFFKKMKVVDVTCGGEYTLAIT 426
>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Ovis aries]
Length = 1049
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ ++ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 155/341 (45%), Gaps = 64/341 (18%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--S 337
P + EL +GSI V Q++CG +HT+A S
Sbjct: 284 NPRKVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPS 312
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
G+I ++G GG+ GQLG G+ + P V
Sbjct: 313 SGRIYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Ovis aries]
Length = 1057
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ ++ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
[Pan troglodytes]
Length = 979
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Pan paniscus]
Length = 979
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Loxodonta africana]
Length = 1049
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ L+ I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L + +P+L+K L G+ AAG HS
Sbjct: 173 -LDCKKQASPKLLKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS-PKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pongo abelii]
Length = 1057
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 152/338 (44%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
abelii]
Length = 1049
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 152/338 (44%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Ovis aries]
Length = 979
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ ++ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
Length = 1056
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ ++ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
Length = 853
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ ++ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
Length = 1057
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ ++ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
[Felis catus]
Length = 621
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ ++ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Canis lupus familiaris]
Length = 1054
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ G+ WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ ++ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 154/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ +GE + WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Gorilla gorilla gorilla]
Length = 1049
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V +++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 135/297 (45%), Gaps = 36/297 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LI-----------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
+ S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G + A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pongo abelii]
Length = 979
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 152/338 (44%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|157849730|gb|ABV89648.1| UVB-resistance 8 [Brassica rapa]
Length = 432
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 171/354 (48%), Gaps = 40/354 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA ++H + ++ CG HT+ +++ VY+ G DFG
Sbjct: 35 WGRGEDGQLGHGDAEDRSSPTQLSALDEHQIVSVTCGADHTVAYSQSRLEVYSWGWGDFG 94
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L ++ QI+ G H A+T+DGE+ WG+N NGQLGLG
Sbjct: 95 RLG-HGNSSDLFTPLPIKALHGVMIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGNT 153
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G + W G + G + L F
Sbjct: 154 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWD-GKIWKFGISDRNDRL-F 209
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC---IDE--NGRVYIFG---------DRA 266
L+ EY +++++G ++ + L S +++ R + G R+
Sbjct: 210 LK---EYLC-CVRDVDGAVMQPHISFLLWSIIYLWMEQIWPTRTWRLGGSPCFLTNWKRS 265
Query: 267 VDKMLFQ-EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 325
Q G L S G+LY WG N+ G +G+G+ SP +V+ P + V Q
Sbjct: 266 ATAFFSQISGGWRHTMPLTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP-DDQKVVQ 324
Query: 326 VSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
VSCGW+HT A++E + WG G + GQLG G +D P I+
Sbjct: 325 VSCGWRHTLAVTERNNVFAWGRG------------TNGQLGIGESLDRNSPNII 366
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 167/352 (47%), Gaps = 56/352 (15%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
++ G +H++ L V + G + GQLG + S P ++S L + ++V ++ G H
Sbjct: 16 ISAGASHSVALLSGEVVCSWGRGEDGQLGHGDAEDRS-SPTQLSALDEHQIVSVTCGADH 74
Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+ A + E+Y WG G+LG G + P+P K L G+ KQ A G +AVT
Sbjct: 75 TVAYSQSRLEVYSWGWGDFGRLGHGNSSDLFTPLPIKA--LHGVMIKQIACGDSHCLAVT 132
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG +G+LG G L P+ I+ EG+++K+ AAG H+A +
Sbjct: 133 MDGEVQSWGRNQNGQLGLGNTEDSL---------VPQKIQAFEGIRIKMVAAGAEHTAAV 183
Query: 254 DE-------NGRVYIFG--DRAVDKMLFQE--------GNHARRP--SLISGGELYTW-- 292
E +G+++ FG DR D++ +E +P S + +Y W
Sbjct: 184 TEDGDLYGWDGKIWKFGISDRN-DRLFLKEYLCCVRDVDGAVMQPHISFLLWSIIYLWME 242
Query: 293 --GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGS 349
LG GS L + +R F Q+S GW+HT + S+GK+ WGW
Sbjct: 243 QIWPTRTWRLG-GSPCFLTNWKRSATAF----FSQISGGWRHTMPLTSDGKLYGWGW--- 294
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ GQ+G GN++D P V F ++ K +QVSCG+ HT A+ E
Sbjct: 295 ---------NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTE 337
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTG 131
++ G HT+ LT G +Y G N FGQ+G+ N+ P+++ ++VVQ+S G
Sbjct: 270 FSQISGGWRHTMPLTSDGKLYGWGWNKFGQVGVGNNLD-QCSPVQVRFPDDQKVVQVSCG 328
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
+ H+ A+T ++ WG+ +NGQLG+G+ + P +E LS
Sbjct: 329 WRHTLAVTERNNVFAWGRGTNGQLGIGESLDR--NSPNIIEALS 370
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 15/133 (11%)
Query: 269 KMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 328
K+L + +L+SG + +WG E+G LG G + SP ++ E + V+C
Sbjct: 12 KVLIISAGASHSVALLSGEVVCSWGRGEDGQLGHGDAEDRSSPTQLSA-LDEHQIVSVTC 70
Query: 329 GWKHTAAISEGK--ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
G HT A S+ + + +WGWG G+LGHGN D P + V
Sbjct: 71 GADHTVAYSQSRLEVYSWGWG------------DFGRLGHGNSSDLFTPLPIKALHGVMI 118
Query: 387 LQVSCGFNHTGAL 399
Q++CG +H A+
Sbjct: 119 KQIACGDSHCLAV 131
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G++G+G+ + PV + + ++CG HTL +TE V+A G GQ
Sbjct: 292 WGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQ 351
Query: 103 LGISENIGYS----LEPLRISGLKKEVVQIST 130
LGI E++ + +E L + G + ++ S+
Sbjct: 352 LGIGESLDRNSPNIIEALSVDGASGQHIESSS 383
>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Gorilla gorilla gorilla]
Length = 1057
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V +++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 135/297 (45%), Gaps = 36/297 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LI-----------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
+ S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G + A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Gorilla gorilla gorilla]
Length = 979
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V +++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 135/297 (45%), Gaps = 36/297 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LI-----------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
+ S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G + A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
gallus]
Length = 1056
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 162/362 (44%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + P + L + +V +S G H+ A+ G++Y WG ++GQLGL
Sbjct: 64 GQLGHEKA---RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I +P ++ LS I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P +IK L G+ AAG HS
Sbjct: 177 -----KQNSPHVIKSLLGIPFAQIAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ ++ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVV-HICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 151/338 (44%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG ++R RP A + ++ A++CG AHTL L + G VYA GL GQL
Sbjct: 59 GCNDLGQLG--HEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ P I L + ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG ++
Sbjct: 177 KQNS-PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L KV G H+A + + G V+ FG
Sbjct: 229 --DRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFG------------------- 267
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+GG G LG S +P +V S V Q++CG +HT A S G+
Sbjct: 268 --AGG---------YGQLGHNSTSHEINPRKV-FELMGSLVTQITCGRQHTTAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGTTSNRKSPFTV 341
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P V + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG++++ + L S ++VV I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSN 334
>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
Length = 1057
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V +++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 135/297 (45%), Gaps = 36/297 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LI-----------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
+ S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G + A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Equus caballus]
Length = 1049
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 165/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 173 -IDYKKQASPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ ++ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 155/341 (45%), Gaps = 64/341 (18%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--S 337
P + EL +GSI V Q++CG +HT+A S
Sbjct: 284 NPRKVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPS 312
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
G+I ++G GG+ GQLG G+ + P V
Sbjct: 313 SGRIYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 92/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
Length = 1049
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V +++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 135/297 (45%), Gaps = 36/297 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LI-----------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
+ S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G + A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Meleagris gallopavo]
Length = 1056
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 162/362 (44%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + P + L + +V +S G H+ A+ G++Y WG ++GQLGL
Sbjct: 64 GQLGHEKA---RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I +P ++ LS I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P +IK L G+ AAG HS
Sbjct: 177 -----KQNSPHVIKSLLGIPFAQIAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ ++ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVV-HICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 151/338 (44%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG ++R RP A + ++ A++CG AHTL L + G VYA GL GQL
Sbjct: 59 GCNDLGQLG--HEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ P I L + ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG ++
Sbjct: 177 KQNS-PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L KV G H+A + + G V+ FG
Sbjct: 229 --DRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFG------------------- 267
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+GG G LG S +P +V S V Q++CG +HT A S G+
Sbjct: 268 --AGG---------YGQLGHNSTSHEINPRKV-FELMGSLVTQITCGRQHTTAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGTTSNRKSPFTV 341
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P V + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG++++ + L S ++VV I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSN 334
>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Equus caballus]
Length = 1057
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 165/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 173 -IDYKKQASPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ ++ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 155/341 (45%), Gaps = 64/341 (18%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--S 337
P + EL +GSI V Q++CG +HT+A S
Sbjct: 284 NPRKVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPS 312
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
G+I ++G GG+ GQLG G+ + P V
Sbjct: 313 SGRIYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 92/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Meleagris gallopavo]
Length = 1048
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 162/362 (44%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + P + L + +V +S G H+ A+ G++Y WG ++GQLGL
Sbjct: 64 GQLGHEKA---RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I +P ++ LS I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P +IK L G+ AAG HS
Sbjct: 177 -----KQNSPHVIKSLLGIPFAQIAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ ++ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVV-HICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 151/338 (44%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG ++R RP A + ++ A++CG AHTL L + G VYA GL GQL
Sbjct: 59 GCNDLGQLG--HEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ P I L + ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG ++
Sbjct: 177 KQNS-PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L KV G H+A + + G V+ FG
Sbjct: 229 --DRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFG------------------- 267
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+GG G LG S +P +V S V Q++CG +HT A S G+
Sbjct: 268 --AGG---------YGQLGHNSTSHEINPRKV-FELMGSLVTQITCGRQHTTAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGTTSNRKSPFTV 341
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P V + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG++++ + L S ++VV I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSN 334
>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
Length = 979
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V +++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 135/297 (45%), Gaps = 36/297 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LI-----------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
+ S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G + A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|374296377|ref|YP_005046568.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium clariflavum DSM 19732]
gi|359825871|gb|AEV68644.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium clariflavum DSM 19732]
Length = 819
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 177/381 (46%), Gaps = 58/381 (15%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG E P E + +A G H+L L + G V+A G N +G
Sbjct: 133 WGYNSYGQLGLGEAGEIERIPKKIEGLE--DVIKVAAGSRHSLALKKDGTVWAWGYNYYG 190
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG NI + P+++ GL V I G S A+ DG ++ WG N GQ+G G
Sbjct: 191 QLGDESNIRRN-TPVQVKGLTG-VKDIDAGDFFSVALRDDGTVWGWGYNYKGQIGCGTGI 248
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+P+ T +S I Q + G E +A+ V WGAG G+LG+G +S L
Sbjct: 249 NSNVPLQTV--GVSNI--TQISAGDEHVLALDKDKNVWGWGAGDKGQLGNGTAASFLRIP 304
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD---------RAVDKMLF 272
S +T +VK AG + SA I E+G ++I+GD R ++
Sbjct: 305 EKLSSFT----------EVKSVKAGTMVSAAIKEDGTLWIWGDNTYGIMGNSRNINSSPV 354
Query: 273 Q----------EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
Q E N +L + G ++TWG N NG LG+G+ P V G
Sbjct: 355 QRKDISGIKAVELNQYCAAALKNDGTVWTWGKNINGILGLGTALDSQIPSVVSGT---GD 411
Query: 323 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI-HPTIVNF 380
V+ +SCG H A I S+G + TW G++ GQLG+GN VDYI P +N
Sbjct: 412 VEVISCGKTHMAIIKSDGTLWTW------------GYNIYGQLGNGN-VDYITEPVTING 458
Query: 381 GENVKALQVSCGFNHTGALLE 401
N+ ++SCG H A+ E
Sbjct: 459 ISNIS--KISCGGKHVLAIDE 477
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 157/379 (41%), Gaps = 48/379 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG S R PV +K + G ++ L + G V+ G N GQ
Sbjct: 184 WGYNYYGQLGDESNIRRNTPVQVKGLT--GVKDIDAGDFFSVALRDDGTVWGWGYNYKGQ 241
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+G I ++ PL+ G+ + QIS G H A+ D ++ WG GQLG G AA
Sbjct: 242 IGCGTGINSNV-PLQTVGVSN-ITQISAGDEHVLALDKDKNVWGWGAGDKGQLGNG-TAA 298
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ IP K+ + + K G S A+ G + WG G +G+ + +
Sbjct: 299 SFLRIPEKLSSFTEV--KSVKAGTMVSAAIKEDGTLWIWGDNTYGIMGNSRNIN------ 350
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+P K++ G+K +A + +G V+ +G + ++ PS
Sbjct: 351 ----SSPVQRKDISGIKA--VELNQYCAAALKNDGTVWTWGKNINGILGLGTALDSQIPS 404
Query: 283 LISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
++SG G L+TWG N G LG G++D + P + G S
Sbjct: 405 VVSGTGDVEVISCGKTHMAIIKSDGTLWTWGYNIYGQLGNGNVDYITEPVTINGI---SN 461
Query: 323 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 382
+ ++SCG KH AI E K L W WG + D + G DY P V +
Sbjct: 462 ISKISCGGKHVLAIDENKTL-WAWGNNDYLQLIDDVGLSAESGSN---DYCIPFAVKSEK 517
Query: 383 NVKALQVSCGFNHTGALLE 401
+VK + FN T + E
Sbjct: 518 DVK--DIVAAFNRTLVVYE 534
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 15/176 (8%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
++ A+A G H++ L G V+ G N FG+L N +SLEP++ GL+ + IS G
Sbjct: 621 NIVAVAAGSEHSVALKNDGTVWTWGSNQFGELA-HGNDTFSLEPMQAEGLEN-ICAISAG 678
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
+++ A+ DG ++ WG N+ GQLG G +P+ +V+ L I A G + S A
Sbjct: 679 NNYNLALKEDGTVWAWGDNTYGQLGNGSTYKTNVPV--QVDGLENIVKIIA--GRDSSFA 734
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+T G V +WG G+LG G + L TP I +G K ++ F
Sbjct: 735 ITKDGDVWAWGKNNCGQLGDGTTQNRL---------TPVKIDAFKGCKSIVSGMDF 781
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
VQ++ G +H+ A+ DG ++ WG NS GQLGLG +A ++ IP K+E L + + A G
Sbjct: 112 VQVACGEYHTIALKKDGTVWTWGYNSYGQLGLG-EAGEIERIPKKIEGLEDVI--KVAAG 168
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
S+A+ G V +WG G+L G ES+I TP +K L GVK I A
Sbjct: 169 SRHSLALKKDGTVWAWGYNYYGQL--GDESNI-------RRNTPVQVKGLTGVK-DIDAG 218
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSI 305
F A D+ G ++ WG N G +G G+
Sbjct: 219 DFFSVALRDD-------------------------------GTVWGWGYNYKGQIGCGTG 247
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 365
+ P + G S + Q+S G +H A+ + K + WGWG GQLG
Sbjct: 248 INSNVPLQTVGV---SNITQISAGDEHVLALDKDKNV-WGWGA----------GDKGQLG 293
Query: 366 HGNDVDYIH-PTIVNFGENVKALQ----VSCGFNHTGAL 399
+G ++ P ++ VK+++ VS G L
Sbjct: 294 NGTAASFLRIPEKLSSFTEVKSVKAGTMVSAAIKEDGTL 332
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 17/191 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G L G+ P+ E ++ A++ G + L L E G V+A G N +GQ
Sbjct: 644 WGSNQFGELAHGNDTFSLEPMQAEGLE--NICAISAGNNYNLALKEDGTVWAWGDNTYGQ 701
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ P+++ GL+ +V+I G S AIT DG+++ WGKN+ GQLG G
Sbjct: 702 LGNGSTYKTNV-PVQVDGLEN-IVKIIAGRDSSFAITKDGDVWAWGKNNCGQLGDGTTQN 759
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ K++ G K G + ++ + G V+ G+ SG + LGF
Sbjct: 760 RLTPV--KIDAFKG--CKSIVSGMDFTMVLMNDGTVIGVGSNVSGVM-------TLGF-- 806
Query: 223 STSEYTPRLIK 233
S + P +K
Sbjct: 807 SDRSFIPIEVK 817
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 160/387 (41%), Gaps = 61/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G+++ PV + ++ ++CGG H L + E ++A G ND+ Q
Sbjct: 434 WGYNIYGQLGNGNVDYITEPVTINGIS--NISKISCGGKHVLAIDENKTLWAWGNNDYLQ 491
Query: 103 LGISENIGYSLE--------PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L +++G S E P + +K+V I ++ + + D E++++ N
Sbjct: 492 L--IDDVGLSAESGSNDYCIPFAVKS-EKDVKDIVAAFNRTLVVYEDEEVWIYAA-KNTV 547
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
G + + +P K+E L G+ ++G +A+ G V S G G+LG G +
Sbjct: 548 AG----DEQSVYLPYKIEGLEGV--TDVSVGKNHILALKDDGYVYSAGNSYWGQLGDGSQ 601
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ S SE T L K + AAG HS + +G V+ +G ++
Sbjct: 602 T----HHNSYSE-TFNLTKAKGLTNIVAVAAGSEHSVALKNDGTVWTWGSNQFGELAHGN 656
Query: 275 GNHARRP--------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
+ P +L G ++ WG N G LG GS + P +V
Sbjct: 657 DTFSLEPMQAEGLENICAISAGNNYNLALKEDGTVWAWGDNTYGQLGNGSTYKTNVPVQV 716
Query: 315 QGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G E+ V ++ A +G + W W G ++ GQLG G + +
Sbjct: 717 DGL--ENIVKIIAGRDSSFAITKDGDV--WAW----------GKNNCGQLGDGTTQNRLT 762
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P ++ + K+ + G + T L+
Sbjct: 763 PVKIDAFKGCKS--IVSGMDFTMVLMN 787
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 148/371 (39%), Gaps = 79/371 (21%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G LGLG+ P V S ++ ++CG H + G ++ G N +GQ
Sbjct: 384 WGKNINGILGLGTALDSQIPSVVSG--TGDVEVISCGKTHMAIIKSDGTLWTWGYNIYGQ 441
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL----GLG 158
LG + N+ Y EP+ I+G+ + +IS G H AI + L+ WG N QL GL
Sbjct: 442 LG-NGNVDYITEPVTINGISN-ISKISCGGKHVLAIDENKTLWAWGNNDYLQLIDDVGLS 499
Query: 159 KKAAK---VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
++ IP K E K F +++ V +V + A + G E
Sbjct: 500 AESGSNDYCIPFAVKSEK----DVKDIVAAFNRTLVVYEDEEVWIYAAKNTVA---GDEQ 552
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S+ Y P I+ LEGV + G H + ++G VY
Sbjct: 553 SV---------YLPYKIEGLEGVT--DVSVGKNHILALKDDGYVY--------------- 586
Query: 276 NHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP----VDQVSCGWK 331
S G Y WG LG GS H+ +++ + V+ G +
Sbjct: 587 ---------SAGNSY-WGQ-----LGDGS-QTHHNSYSETFNLTKAKGLTNIVAVAAGSE 630
Query: 332 HTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 390
H+ A+ ++G + TWG + G+L HGND + P EN+ A +S
Sbjct: 631 HSVALKNDGTVWTWG------------SNQFGELAHGNDTFSLEPMQAEGLENICA--IS 676
Query: 391 CGFNHTGALLE 401
G N+ AL E
Sbjct: 677 AGNNYNLALKE 687
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 12/134 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG GS PV E ++ + G + +T+ G V+A G N+ GQ
Sbjct: 694 WGDNTYGQLGNGSTYKTNVPVQVDGLE--NIVKIIAGRDSSFAITKDGDVWAWGKNNCGQ 751
Query: 103 LG--ISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
LG ++N L P++I K K +V +G + + DG + G N +G + LG
Sbjct: 752 LGDGTTQN---RLTPVKIDAFKGCKSIV---SGMDFTMVLMNDGTVIGVGSNVSGVMTLG 805
Query: 159 KKAAKVIPIPTKVE 172
IPI K++
Sbjct: 806 FSDRSFIPIEVKIK 819
>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
Length = 1027
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 165/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V +++CG HT
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTST 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 135/297 (45%), Gaps = 36/297 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LI-----------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
+ S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQ-SVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G + A G + S V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 1085
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 121/379 (31%), Positives = 179/379 (47%), Gaps = 59/379 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G+ ++ PV + + S+ ALA G H+L L G V+A G N FGQ
Sbjct: 61 WGDNTYGQLGDGTGITQRLPVRVQSLD--SVVALAVGYQHSLALRSDGTVWAWGDNFFGQ 118
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S P+++ L VV I+ G HHS A+ DG ++ WG N++GQLG A
Sbjct: 119 LGDGSD-AQSQVPIQVWSLNG-VVAIAAGDHHSLALLSDGSVWAWGYNAHGQLGDDTTVA 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P+P +V+ LSG+ A G S+AV GKV +WG G+LG G
Sbjct: 177 S--PLPVQVQGLSGVVALSA--GSTHSLAVLSDGKVKAWGDNYYGQLGDGS--------- 223
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP- 281
ST +TP L+ L GVK + AG HS + +G V +G+ ++ + RRP
Sbjct: 224 STERWTPVLVSSLTGVKSVV--AGTFHSLALCSDGTVRAWGENGSGQLGIS--STTRRPV 279
Query: 282 ---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
+L S G + WG+N++G +G G+I +P +V G
Sbjct: 280 PVVVPGLTNVQALAAGSAHSLALRSDGTVRAWGNNDHGQVGNGTISQQLTPVQVPG---V 336
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
+ ++ G H+ A+ I TW W G S GQLG G + P V
Sbjct: 337 GRMKSIAAGGAHSLAMRADGI-TWAW----------GDDSQGQLGDGQSSQQLRPARV-L 384
Query: 381 GENVKALQVSCGFNHTGAL 399
G+ ++ + + G H+ AL
Sbjct: 385 GQRIR-MPLGTGNRHSLAL 402
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 167/377 (44%), Gaps = 56/377 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN YG+LG G+ S PV ++K +A GG+H+L + G V+A G N G+
Sbjct: 711 WGNNAYGQLGDGT--STLHPVPVQVPGPSAMKGVAAGGSHSLAVRSDGTVWAWGNNGSGE 768
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+++ GL V +S G +HS A+ DG ++ WG NS GQLG G
Sbjct: 769 LGDGTGL-QRPRPVQVQGLGSAVA-VSAGTNHSLAVQSDGTVWAWGGNSQGQLGDGTGIT 826
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P+ +V L+G+ A G S+A+ G V +WG G+LG
Sbjct: 827 RYVPV--RVSGLNGVMAVSA--GSAHSLALRSDGTVWAWGYNFYGQLGDA---------T 873
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG----DRAVDKMLFQEGNHA 278
ST P + L GV V I AAG HS + +G V+ +G + D Q
Sbjct: 874 STQRLVPIQVPGLTGV-VSI-AAGTHHSLAVRSDGTVWAWGYNFYGQLGDGTKIQRSPPV 931
Query: 279 RRPSLI----------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
+ P L S G ++ WG N +G LG G+ P + S S
Sbjct: 932 QVPGLAGMVSVAAGTYHSLAVHSNGTVWAWGYNNHGQLGDGTTTQRLLPVPIS---SSSG 988
Query: 323 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 382
V + W ++G + WGWG ++ + QLG G+ D PT +
Sbjct: 989 VIAAAANWHSLVVRTDGTV--WGWGSNNAS----------QLGDGSTSDRKMPTPSSVPN 1036
Query: 383 NVKALQVSCGFNHTGAL 399
V++ +S G NH+ AL
Sbjct: 1037 GVRS--ISSGANHSLAL 1051
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 168/378 (44%), Gaps = 57/378 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN D+G++G G++ + PV + +K++A GGAH+L + G +A G + GQ
Sbjct: 311 WGNNDHGQVGNGTISQQLTPVQVPGVGR--MKSIAAGGAHSLAMRADGITWAWGDDSQGQ 368
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ L P R+ G ++ + + TG HS A+ DG ++ WG N+ GQLG G
Sbjct: 369 LGDGQS-SQQLRPARVLG-QRIRMPLGTGNRHSLALHADGTVWAWGVNTAGQLGDGTDLP 426
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P+ +V L+G+ T A S+A G V +WG G+LG G
Sbjct: 427 RTLPV--QVPGLAGVHTLSAT--TSHSLAARADGTVWAWGDNAFGQLGDG---------T 473
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG----DRAVDKMLFQEGNHA 278
+T P + L GV ++ HS + +G V+ +G R D
Sbjct: 474 TTQRLLPVQVPGLAGVDT--VSSMHQHSLAVSRDGTVWAWGFNGSGRLGDGTTLSRLTPV 531
Query: 279 RRPSLIS----------------GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
+ P L S G ++ WG N NG LG G+ SP +V G S
Sbjct: 532 QVPGLSSMVAVAAGSTHSLALRADGTVWAWGDNSNGALGDGTTLRRLSPVQVPG---LSG 588
Query: 323 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
V ++ G ++ A+ ++G + WG+ G GQLG G + PT
Sbjct: 589 VVALAAGNGYSLAVDAQGSVWAWGYNGM------------GQLGDGTTTPRVTPTQAPAL 636
Query: 382 ENVKALQVSCGFNHTGAL 399
V AL + G +H+ AL
Sbjct: 637 SGVVAL--AAGDSHSLAL 652
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 166/379 (43%), Gaps = 59/379 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G+LG G+ R PV + ++ H+L ++ G V+A G N G+
Sbjct: 461 WGDNAFGQLGDGTTTQRLLPVQVPGLA--GVDTVSSMHQHSLAVSRDGTVWAWGFNGSGR 518
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L P+++ GL +V ++ G HS A+ DG ++ WG NSNG LG G
Sbjct: 519 LGDGTTL-SRLTPVQVPGLS-SMVAVAAGSTHSLALRADGTVWAWGDNSNGALGDGTTLR 576
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V LSG+ A G+ S+AV G V +WG G G+LG G
Sbjct: 577 RLSPV--QVPGLSGVVALAAGNGY--SLAVDAQGSVWAWGYNGMGQLGDG---------T 623
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV----DKMLFQEGNHA 278
+T TP L GV AAG HS + +G + +G D + A
Sbjct: 624 TTPRVTPTQAPALSGVVAL--AAGDSHSLALRADGVAWAWGGNDQGQLGDATTLERSTPA 681
Query: 279 RRPSLI----------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
P L + G +WG+N G LG G+ + P +V GP S
Sbjct: 682 AVPGLAHVVALAAGNAHSLVLHADGTSSSWGNNAYGQLGDGTSTLHPVPVQVPGP---SA 738
Query: 323 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN-F 380
+ V+ G H+ A+ S+G + WG GS G+LG G + P V
Sbjct: 739 MKGVAAGGSHSLAVRSDGTVWAWGNNGS------------GELGDGTGLQRPRPVQVQGL 786
Query: 381 GENVKALQVSCGFNHTGAL 399
G A+ VS G NH+ A+
Sbjct: 787 GS---AVAVSAGTNHSLAV 802
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 138/308 (44%), Gaps = 54/308 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R+ PV S + + A++ G AH+L L G V+A G N +GQ
Sbjct: 811 WGGNSQGQLGDGTGITRYVPVRVSGL--NGVMAVSAGSAHSLALRSDGTVWAWGYNFYGQ 868
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + L P+++ GL VV I+ G HHS A+ DG ++ WG N GQLG G K
Sbjct: 869 LGDATST-QRLVPIQVPGLTG-VVSIAAGTHHSLAVRSDGTVWAWGYNFYGQLGDGTKIQ 926
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V L+G+ + A G S+AV G V +WG G+LG G
Sbjct: 927 RSPPV--QVPGLAGMVS--VAAGTYHSLAVHSNGTVWAWGYNNHGQLGDG---------T 973
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T P I GV IAAA HS + +G V
Sbjct: 974 TTQRLLPVPISSSSGV---IAAAANWHSLVVRTDGTV----------------------- 1007
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 341
+ WGSN LG GS P P V +S G H+ A+ S+G +
Sbjct: 1008 -------WGWGSNNASQLGDGSTSDRKMPTPSSVPNG---VRSISSGANHSLALRSDGTV 1057
Query: 342 LTWGWGGS 349
WG+G S
Sbjct: 1058 WAWGFGNS 1065
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 154/357 (43%), Gaps = 55/357 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G+LG GS P+ + + + A+A G H+L L G V+A G N GQ
Sbjct: 111 WGDNFFGQLGDGSDAQSQVPI--QVWSLNGVVAIAAGDHHSLALLSDGSVWAWGYNAHGQ 168
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L P+++ GL VV +S G HS A+ DG++ WG N GQLG G
Sbjct: 169 LGDDTTVASPL-PVQVQGLSG-VVALSAGSTHSLAVLSDGKVKAWGDNYYGQLGDGSSTE 226
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L+G+ K G S+A+ G V +WG GSG+ LG
Sbjct: 227 RWTPV--LVSSLTGV--KSVVAGTFHSLALCSDGTVRAWGENGSGQ---------LGISS 273
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR--------AVDKML--F 272
+T P ++ L V+ AAG HS + +G V +G+ + + L
Sbjct: 274 TTRRPVPVVVPGL--TNVQALAAGSAHSLALRSDGTVRAWGNNDHGQVGNGTISQQLTPV 331
Query: 273 QEGNHARRPSLISGGE----------LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
Q R S+ +GG + WG + G LG G P RV G P
Sbjct: 332 QVPGVGRMKSIAAGGAHSLAMRADGITWAWGDDSQGQLGDGQSSQQLRPARVLGQRIRMP 391
Query: 323 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
+ G +H+ A+ ++G + W G ++ GQLG G D+ P V
Sbjct: 392 ---LGTGNRHSLALHADGTVWAW------------GVNTAGQLGDGTDLPRTLPVQV 433
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 159/375 (42%), Gaps = 59/375 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG+ S R PVV ++ALA G AH+L L G V A G ND GQ
Sbjct: 261 WGENGSGQLGISSTTRRPVPVVVPGLTN--VQALAAGSAHSLALRSDGTVRAWGNNDHGQ 318
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+G + I L P+++ G+ + + I+ G HS A+ DG + WG +S GQLG G+ +
Sbjct: 319 VG-NGTISQQLTPVQVPGVGR-MKSIAAGGAHSLAMRADGITWAWGDDSQGQLGDGQSSQ 376
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P L G S+A+ G V +WG +G+LG G +
Sbjct: 377 QLRP----ARVLGQRIRMPLGTGNRHSLALHADGTVWAWGVNTAGQLGDGTD-------- 424
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
P + L GV A HS +G V+ +GD A ++ +G +R
Sbjct: 425 -LPRTLPVQVPGLAGVHTLSATTS--HSLAARADGTVWAWGDNAFGQL--GDGTTTQRLL 479
Query: 281 PSLISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
P + G G ++ WG N +G LG G+ +P +V G
Sbjct: 480 PVQVPGLAGVDTVSSMHQHSLAVSRDGTVWAWGFNGSGRLGDGTTLSRLTPVQVPG---L 536
Query: 321 SPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
S + V+ G H+ A+ ++G + W G +S G LG G + + P V
Sbjct: 537 SSMVAVAAGSTHSLALRADGTVWAW------------GDNSNGALGDGTTLRRLSPVQVP 584
Query: 380 FGENVKALQVSCGFN 394
V AL G++
Sbjct: 585 GLSGVVALAAGNGYS 599
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 156/358 (43%), Gaps = 57/358 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R P A + ALA G +H+L L G +A G ND GQ
Sbjct: 611 WGYNGMGQLGDGTTTPRVTPTQAPALS--GVVALAAGDSHSLALRADGVAWAWGGNDQGQ 668
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + S P + GL VV ++ G HS + DG WG N+ GQLG G +
Sbjct: 669 LGDATTLERS-TPAAVPGL-AHVVALAAGNAHSLVLHADGTSSSWGNNAYGQLGDGT--S 724
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+P +V S + K A G S+AV G V +WG GSG LG G G R
Sbjct: 725 TLHPVPVQVPGPSAM--KGVAAGGSHSLAVRSDGTVWAWGNNGSGELGDGT-----GLQR 777
Query: 223 STSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRA--------------- 266
PR + +++G+ +A +AG HS + +G V+ +G +
Sbjct: 778 ------PRPV-QVQGLGSAVAVSAGTNHSLAVQSDGTVWAWGGNSQGQLGDGTGITRYVP 830
Query: 267 -----VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
++ ++ A +L S G ++ WG N G LG + P +V G +
Sbjct: 831 VRVSGLNGVMAVSAGSAHSLALRSDGTVWAWGYNFYGQLGDATSTQRLVPIQVPG---LT 887
Query: 322 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
V ++ G H+ A+ S+G + W G++ GQLG G + P V
Sbjct: 888 GVVSIAAGTHHSLAVRSDGTVWAW------------GYNFYGQLGDGTKIQRSPPVQV 933
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 128/294 (43%), Gaps = 53/294 (18%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
Q++ G HS + DG ++ WG N+ GQLG G + +P+ +V+ L + A+G+
Sbjct: 41 QVAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRLPV--RVQSLDSVVAL--AVGY 96
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+ S+A+ G V +WG G+LG G ++ P + L GV V I AAG
Sbjct: 97 QHSLALRSDGTVWAWGDNFFGQLGDGSDA---------QSQVPIQVWSLNGV-VAI-AAG 145
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP--------------------SLISG 286
HS + +G V+ +G A ++ + P +++S
Sbjct: 146 DHHSLALLSDGSVWAWGYNAHGQLGDDTTVASPLPVQVQGLSGVVALSAGSTHSLAVLSD 205
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 345
G++ WG N G LG GS +P V S + V V G H+ A+ S+G + WG
Sbjct: 206 GKVKAWGDNYYGQLGDGSSTERWTPVLVS---SLTGVKSVVAGTFHSLALCSDGTVRAWG 262
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
GS GQLG + P +V NV+AL + G H+ AL
Sbjct: 263 ENGS------------GQLGISSTTRRPVPVVVPGLTNVQAL--AAGSAHSLAL 302
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 107/256 (41%), Gaps = 52/256 (20%)
Query: 168 PTKVECL---SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
P+++E + +Q A G S+ + G V +WG G+LG G
Sbjct: 25 PSRIEAALTPPPLGHEQVAAGAAHSLMLRSDGTVWAWGDNTYGQLGDG---------TGI 75
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP--- 281
++ P ++ L+ V A G+ HS + +G V+ +GD ++ ++ P
Sbjct: 76 TQRLPVRVQSLD--SVVALAVGYQHSLALRSDGTVWAWGDNFFGQLGDGSDAQSQVPIQV 133
Query: 282 -----------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 324
+L+S G ++ WG N +G LG + P +VQG S V
Sbjct: 134 WSLNGVVAIAAGDHHSLALLSDGSVWAWGYNAHGQLGDDTTVASPLPVQVQG---LSGVV 190
Query: 325 QVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 383
+S G H+ A +S+GK+ WG D + GQLG G+ + P +V+
Sbjct: 191 ALSAGSTHSLAVLSDGKVKAWG----------DNYY--GQLGDGSSTERWTPVLVSSLTG 238
Query: 384 VKALQVSCGFNHTGAL 399
VK+ V G H+ AL
Sbjct: 239 VKS--VVAGTFHSLAL 252
>gi|428178434|gb|EKX47309.1| hypothetical protein GUITHDRAFT_137494 [Guillardia theta CCMP2712]
Length = 432
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 182/391 (46%), Gaps = 67/391 (17%)
Query: 43 WGNGDYGRLGLG-------------SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET 89
WG+ D+GR G G E +PV+ + +K +ACGGAH++ +TE+
Sbjct: 67 WGSADHGRGGSGGHTDAPIFEVIQKEPEKVEKPVLPAKL----IKKVACGGAHSMIVTES 122
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
G + GLND GQLG+ N+ + E + G + + ++ G+ H+ A + G+LY WG
Sbjct: 123 GRLLTCGLNDNGQLGLG-NLENASEFEEVKG-TESIADVAAGFWHTLAASKKGKLYAWGS 180
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N +GQLG A K+ P ++ L KQ A G S+A+T G+V +WG G GRL
Sbjct: 181 NKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHSMALTKDGEVYTWGFGAHGRL 240
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------ 263
GHG + E+ P+ ++ L G + AGF +S+ + +G+V+++G
Sbjct: 241 GHGS---------TEDEFMPKRVEALVGENISSIHAGFEYSSAVSTSGKVFVWGYGHFYV 291
Query: 264 -----------------DRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG--S 304
++ ++ F + A ++ G L+TWG +G LG G S
Sbjct: 292 LGQGDKKDQLAPVVLDFPTSIRQLAFGSFHAA---AVSHSGMLFTWGHATHGPLGHGLKS 348
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL 364
+++ P + P QV+CG +HT ++ G+ FS GQL
Sbjct: 349 PNIILEPTVLDAPAQLQNSKQVACGSQHTLVVT----------GTGDVFSFGL-GGQGQL 397
Query: 365 GHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
G G+D+D+ P + QV+CG H
Sbjct: 398 GLGSDLDHYEPKQIPRFVGKSLRQVACGLFH 428
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 107/242 (44%), Gaps = 44/242 (18%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKI 242
G EQ V + G + SWG+ GR G G ++ I ++ E + + L +K
Sbjct: 51 GREQKVTLAGARTLWSWGSADHGRGGSGGHTDAPIFEVIQKEPEKVEKPV--LPAKLIKK 108
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG---------------- 286
A G HS + E+GR+ G ++ +A + G
Sbjct: 109 VACGGAHSMIVTESGRLLTCGLNDNGQLGLGNLENASEFEEVKGTESIADVAAGFWHTLA 168
Query: 287 ----GELYTWGSNENGCLG--IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EG 339
G+LY WGSN++G LG ++ + P+ + ++P+ QV+CG H+ A++ +G
Sbjct: 169 ASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEIL-LLRDAPIKQVACGSYHSMALTKDG 227
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN--FGENVKALQVSCGFNHTG 397
++ TWG+G G+LGHG+ D P V GEN+ ++ GF ++
Sbjct: 228 EVYTWGFGAH------------GRLGHGSTEDEFMPKRVEALVGENISSIH--AGFEYSS 273
Query: 398 AL 399
A+
Sbjct: 274 AV 275
>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
Length = 794
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 175/358 (48%), Gaps = 60/358 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+GN ++G+LG+GS ++R +P A + + +A G HTL +T++ +Y+ G G
Sbjct: 59 FGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAGRFHTLAVTDSNKLYSFGQGSEGA 118
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + ++ P I L+ K+V I+ G +HS+AIT +GELY+WG NS GQLGL
Sbjct: 119 LGHGDETDLNM-PTSIESLEDKDVNIIACGGYHSAAITKNGELYIWGSNSEGQLGL---K 174
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
I PT ++ + + A G+ + VT GK+ ++G G+LG LG +
Sbjct: 175 NDTISYPTMLDLGKSVIS--VACGYYHTAVVTADGKLYTFGETEGGKLG-------LGDI 225
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ P+++K + G VK+A G NH
Sbjct: 226 EAHKVTKPKVVKGISGKVVKVACGG-----------------------------NHT--V 254
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GK 340
+L + G++YT+GS +NG LG+GS + + ++ S+ + ++CG HTA +S+ G+
Sbjct: 255 ALTASGQVYTFGSGQNGQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVVSDKGE 314
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGND--VDYIHPTIVNFGENVKALQVSCGFNHT 396
+ T+G G H G+LG G++ + P V + L ++CG HT
Sbjct: 315 LFTFG-DGRH-----------GKLGQGDESFSNLFKPVKVQRLKEFIVLHIACGGCHT 360
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 141/300 (47%), Gaps = 50/300 (16%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V I+ G H+ +T +G L+ +G N GQLG+G + K PT V+ L A
Sbjct: 36 KVTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIG--SNKTRNKPTTVKALKPEKITHVA 93
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G ++AVT K+ S+G G G LGHG E+ + P I+ LE V I
Sbjct: 94 AGRFHTLAVTDSNKLYSFGQGSEGALGHGDETDL---------NMPTSIESLEDKDVNII 144
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI------------------- 284
A G HSA I +NG +YI+G + + L + + P+++
Sbjct: 145 ACGGYHSAAITKNGELYIWGSNS-EGQLGLKNDTISYPTMLDLGKSVISVACGYYHTAVV 203
Query: 285 -SGGELYTWGSNENGCLGIGSIDV--LHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 340
+ G+LYT+G E G LG+G I+ + P+ V+G + V +V+CG HT A++ G+
Sbjct: 204 TADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISGK--VVKVACGGNHTVALTASGQ 261
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ T+G G GQLG G+ + D P +V K ++CG +HT +
Sbjct: 262 VYTFGSG------------QNGQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVV 309
>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
Length = 456
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 164/361 (45%), Gaps = 60/361 (16%)
Query: 43 WGNGDYGRLGL-GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG RLG G+ + +P + FE +++ +ACGG HTL L E GC+++ G N +G
Sbjct: 15 WGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHSFGYNQYG 74
Query: 102 QLGISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG + L+ R IS L +++ ++ G +HS+A+ V+G ++ WG NG+LG +
Sbjct: 75 QLGNGTKVDSPLDASRDISSLSNKLIAVACGRYHSAALDVNGTVFTWGGGKNGRLGHNDE 134
Query: 161 AAKVIPIP-TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ IP T + IF G+ + A+T G + +WG G G+LG G G
Sbjct: 135 QTRTIPCRITHLPRAHKIF-----CGYHITAAITDDG-LYTWGWGEHGQLGQGSLEDSYG 188
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
++I + + + A G H E+G
Sbjct: 189 --------PKKVIFDDANLAISQLACGDRHCLVRTESG---------------------- 218
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE- 338
++YTWGSNE G LGIG + ++S + + V V+ G +H+AA++
Sbjct: 219 --------DVYTWGSNEFGQLGIGRYNEIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNT 270
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + TWG G GQ GHG+ D P +V V L+V CG N T A
Sbjct: 271 GSLFTWGCGAE------------GQCGHGDYNDCDMPFLVESLVGVFILKVFCGHNFTVA 318
Query: 399 L 399
L
Sbjct: 319 L 319
>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 967
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 162/362 (44%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P C F +++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G+++ WG GQ+GL
Sbjct: 64 GQLGHDKS---RRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLS- 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
A + I +P ++ LS + Q A G S+A++ + SWG G+LG G
Sbjct: 120 TAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L E PR IK L G+ AAG HS
Sbjct: 173 -LEIKKECAPRHIKSLSGIPFAHIAAGGGHSF---------------------------- 203
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
+L G ++ WG N+ G LG+ + P ++ S+ + + CG HTAA++ E
Sbjct: 204 --ALTISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKII-HICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + ++P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 154/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + + A++CG AHTL L + G V++ G +GQ+
Sbjct: 59 GCNDLGQLGHD--KSRRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQI 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+S Y P I L ++VQ++ G+HHS A++ D +++ WG+N GQLGLG +
Sbjct: 117 GLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ LSGI A G S A+T G + WG G+LG E
Sbjct: 177 KECA-PRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDE-------- 227
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T P L+K L K+ G H+A + + G V+ FG ++ NH P
Sbjct: 228 -TDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTLAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ ++ P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTINRKSPFTV 341
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 4/172 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG ++ P + +A GG H+ LT +G ++ G N FG
Sbjct: 161 WGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ ++ L S ++++ I G H++A+T +G ++ +G GQLG
Sbjct: 221 QLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTN 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
+V P KV L G Q A G + ++A V G++ S+G GG+G+LG G
Sbjct: 281 HEV--NPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTG 330
>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus (Silurana) tropicalis]
gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 1049
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 162/362 (44%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P C F +++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G+++ WG GQ+GL
Sbjct: 64 GQLGHDKS---RRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLS- 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
A + I +P ++ LS + Q A G S+A++ + SWG G+LG G
Sbjct: 120 TAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L E PR IK L G+ AAG HS
Sbjct: 173 -LEIKKECAPRHIKSLSGIPFAHIAAGGGHSF---------------------------- 203
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
+L G ++ WG N+ G LG+ + P ++ S+ + + CG HTAA++ E
Sbjct: 204 --ALTISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKII-HICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + ++P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 154/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + + A++CG AHTL L + G V++ G +GQ+
Sbjct: 59 GCNDLGQLGHD--KSRRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQI 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+S Y P I L ++VQ++ G+HHS A++ D +++ WG+N GQLGLG +
Sbjct: 117 GLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ LSGI A G S A+T G + WG G+LG E
Sbjct: 177 KECA-PRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDE-------- 227
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T P L+K L K+ G H+A + + G V+ FG ++ NH P
Sbjct: 228 -TDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTLAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ ++ P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTINRKSPFTV 341
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 4/172 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG ++ P + +A GG H+ LT +G ++ G N FG
Sbjct: 161 WGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ ++ L S ++++ I G H++A+T +G ++ +G GQLG
Sbjct: 221 QLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTN 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
+V P KV L G Q A G + ++A V G++ S+G GG+G+LG G
Sbjct: 281 HEV--NPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTG 330
>gi|452821114|gb|EME28148.1| regulator of chromosome condensation [Galdieria sulphuraria]
Length = 424
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 201/439 (45%), Gaps = 66/439 (15%)
Query: 9 MTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLG-LGSLE---------S 58
M YY K++I + + S +R WGN D G G L S E S
Sbjct: 1 MFSYYGKKNILFIRFIYHNRYSYKSKGRRSIVYAWGNSDGGWTGHLPSEEYEDHVSGATS 60
Query: 59 RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLEP 115
+RP + ++ + S++ +ACG TLF+T+ G VY++G+ +GQLG + E G +L
Sbjct: 61 VYRPKIVASLQNKSIRDVACGQGFTLFVTQQGQVYSSGVGRYGQLGLGSLKEVEGITL-- 118
Query: 116 LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
I + ++V+ + G HS +T G LY G G+LGLG ++ + P VE L+
Sbjct: 119 --IDSIPEKVITCAAGDRHSLFVTEQGHLYSCGYGKRGELGLG-TISRRMETPQLVESLA 175
Query: 176 GIFTK--QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL------RSTSEY 227
K + A G S+A++ GKV S+G+ G LGHG+ + FL E
Sbjct: 176 REEEKIIKVAAGHGFSIALSESGKVYSFGSANDGHLGHGEVPGGI-FLWEPFHSHRNMET 234
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---------DRAVDKMLFQEGNHA 278
+PRLI+ LE +++ + G H+ I++ G + +G D V+ Q H
Sbjct: 235 SPRLIRALEKEQMEYISCGSGHAFAINKEGVAFGWGCGRYHCFATDNEVNWEQPQALFHL 294
Query: 279 RRP------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF---SESPV 323
P L GG+++ WG N GCLG+G R+ ++ P+
Sbjct: 295 PGPWKQIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVGEQRTSPGEPRIVEKLLQQAKEPI 354
Query: 324 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF-- 380
++ GW + A+ SEG + +WG GH+ G LG G + D P +
Sbjct: 355 QWIAAGWFFSMAVDSEGYVYSWG----------RGHA--GALGTGEEEDKWEPVAIQNEQ 402
Query: 381 GENVKALQVSCGFNHTGAL 399
GE ++ ++ GFN+ A+
Sbjct: 403 GEPLQVDRIYAGFNYAIAV 421
>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
Length = 677
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 161/362 (44%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P C F +++ + CG HT F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G+++ WG ++GQ+G+
Sbjct: 64 GQLGHDKS---RKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVS- 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
A I +P ++ LS I Q A G S+A++ + SWG G+LG G E
Sbjct: 120 IAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKR--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
E PR IK L G+ AAG HS
Sbjct: 177 -----KESAPRHIKSLSGIPFAHIAAGGGHSF---------------------------- 203
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
+L G ++ WG N+ G LG+ P ++ S+ + + CG HTAA++ E
Sbjct: 204 --ALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQK-IIYICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + ++P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 135/297 (45%), Gaps = 36/297 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + + A++CG AHTL L + G V++ G GQ+
Sbjct: 59 GCNDLGQLGHD--KSRKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQI 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+S Y P I L ++VQ++ G+HHS A++ + +Y WG+N GQLGLG +
Sbjct: 117 GVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKR 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ LSGI A G S A+T G + WG G+LG E
Sbjct: 177 KE-SAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDE-------- 227
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 228 -TDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPR 286
Query: 283 LI-----------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
+ S G +Y++G NG LGIGS SP V+G
Sbjct: 287 KVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVKG 343
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLGS + + P + +A GG H+ LT +G ++ G N FG
Sbjct: 161 WGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ S L S ++++ I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSAS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
+V P KV L G Q A G + ++A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEV--NPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSN 334
>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1049
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 168/361 (46%), Gaps = 58/361 (16%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN G+LG+G + P +C F LK +ACGG HTLFL + G VY G N G
Sbjct: 4 WGNARDGQLGIGVEGNPVFEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSNSCG 63
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG + G S P + L +++ +S G HS A+ G++++WG GQLGL +
Sbjct: 64 QLG-HDKAGNS--PELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGL-ET 119
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + IP ++ L Q G + +A++ G++ +WG SG+LG G+
Sbjct: 120 AETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGK------- 172
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
TS+ +P +K L G+ + AG G+H
Sbjct: 173 -GETSKLSPSPVKSLAGIPLAQITAG----------------------------GDHCFA 203
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-G 339
SL G ++ WG N+ G LG+ P ++ S+ V +SCG +HTAA+++ G
Sbjct: 204 LSL--SGAVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQRVV-YISCGDEHTAALTKSG 260
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ T+G G S GQLGHG+ + + P V + Q++CG +HT A
Sbjct: 261 GLFTFGDG------------SRGQLGHGSSNNELLPRRVMELMGTEVSQITCGRHHTLAF 308
Query: 400 L 400
+
Sbjct: 309 V 309
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 123/279 (44%), Gaps = 42/279 (15%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+WG GD G+LGL + E+ R P + HS+ + CG H + L+ G ++ G N
Sbjct: 106 VWGAGDGGQLGLETAETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSS 165
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+ + L P + L + QI+ G H A+++ G ++ WGKN GQLGL
Sbjct: 166 GQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLND 225
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + +P ++ L + G E + A+T G + ++G G G+LGHG
Sbjct: 226 KQDRA--VPCHIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHGS------ 277
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S +E PR + EL G +V G H+
Sbjct: 278 ---SNNELLPRRVMELMGTEVSQITCGRHHTLAF-------------------------- 308
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
+ S G +Y +G N +G LG G + L SP V+ F
Sbjct: 309 ---VPSSGTVYAFGCNSHGQLGTGILADLRSPHPVKNDF 344
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 106/269 (39%), Gaps = 80/269 (29%)
Query: 198 VLSWGAGGSGRLGHGQESS-------------------------ILGFLRSTSEYT---- 228
+L WG G+LG G E + L L+ S YT
Sbjct: 1 MLCWGNARDGQLGIGVEGNPVFEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSN 60
Query: 229 -------------PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------------ 263
P L+ L+ K+ + + G HS ++E G+V+++G
Sbjct: 61 SCGQLGHDKAGNSPELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGLETA 120
Query: 264 DRAV--DKMLFQEGNHARRP---------SLISGGELYTWGSNENGCLGIGSIDVLH-SP 311
+ AV ++L + +H+ +L G+L+TWG N +G LG+G + SP
Sbjct: 121 ETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGKGETSKLSP 180
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
V+ + P+ Q++ G H A+S G + W G + GQLG +
Sbjct: 181 SPVKS-LAGIPLAQITAGGDHCFALSLSGAVFGW------------GKNKAGQLGLNDKQ 227
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHTGAL 399
D P + F + + + +SCG HT AL
Sbjct: 228 DRAVPCHIKFLRSQRVVYISCGDEHTAAL 256
>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus laevis]
gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
Length = 897
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 161/362 (44%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P C F +++ + CG HT F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G+++ WG ++GQ+G+
Sbjct: 64 GQLGHDKS---RKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVS- 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
A I +P ++ LS I Q A G S+A++ + SWG G+LG G E
Sbjct: 120 IAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKR--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
E PR IK L G+ AAG HS
Sbjct: 177 -----KESAPRHIKSLSGIPFAHIAAGGGHSF---------------------------- 203
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
+L G ++ WG N+ G LG+ P ++ S+ + + CG HTAA++ E
Sbjct: 204 --ALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKII-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + ++P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 135/297 (45%), Gaps = 36/297 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + + A++CG AHTL L + G V++ G GQ+
Sbjct: 59 GCNDLGQLGHD--KSRKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQI 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+S Y P I L ++VQ++ G+HHS A++ + +Y WG+N GQLGLG +
Sbjct: 117 GVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKR 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ LSGI A G S A+T G + WG G+LG E
Sbjct: 177 KE-SAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDE-------- 227
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 228 -TDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPR 286
Query: 283 LI-----------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
+ S G +Y++G NG LGIGS SP V+G
Sbjct: 287 KVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVKG 343
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLGS + + P + +A GG H+ LT +G ++ G N FG
Sbjct: 161 WGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ S L S ++++ I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSAS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
+V P KV L G Q A G + ++A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEV--NPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSN 334
>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
impatiens]
Length = 1088
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 171/364 (46%), Gaps = 52/364 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSA-FEKHS-LKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G LGLG +E V C F+K S ++ +ACG +T+ +T G +Y+ G ND+
Sbjct: 36 WGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHDGKIYSCGNNDY 95
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E L+ I GL V +++ G +H+ A+ G+L+ WG NS GQLGL
Sbjct: 96 GQLG-HERGRKRLQ--LILGLDAFVFKKVACGAYHTIAVNEWGQLFSWGSNSEGQLGLNS 152
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K P V+ L Q A G + ++A+T G++ SWG+ G+LG G +
Sbjct: 153 KNFMECS-PRMVKTLGTSIIVQVACGMKHALALTNNGELYSWGSNSEGQLGLGVDIR--- 208
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
SE P+LI L GV + A G HS I ++G ++ +G ++ + +
Sbjct: 209 -----SEVKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRN 263
Query: 280 RPS----------------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
P L G ++T G+ G LG GS + P +V
Sbjct: 264 LPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILPRQVM-E 322
Query: 318 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
S V Q+SCG +HT A+ S+G++ WG GG+ GQLG+ + P
Sbjct: 323 LMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGA------------GQLGNNSTRSIPTP 370
Query: 376 TIVN 379
+V+
Sbjct: 371 QVVH 374
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 113/260 (43%), Gaps = 55/260 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G+++ WG +G+LGLG ++I +P +V+ +Q A G +V +T GK+ S
Sbjct: 31 GDMFCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHDGKIYSC 90
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G+LGH + L +LI L+ K A G H+ ++E
Sbjct: 91 GNNDYGQLGHERGRKRL-----------QLILGLDAFVFKKVACGAYHTIAVNE------ 133
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
G+L++WGSN G LG+ S + + R+ S
Sbjct: 134 ------------------------WGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTS 169
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVN 379
+ QV+CG KH A++ G++ +W G +S GQLG G D+ + P ++N
Sbjct: 170 IIVQVACGMKHALALTNNGELYSW------------GSNSEGQLGLGVDIRSEVKPKLIN 217
Query: 380 FGENVKALQVSCGFNHTGAL 399
V ++CG H+ A+
Sbjct: 218 TLAGVPIAFIACGGYHSIAI 237
>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1451
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 174/382 (45%), Gaps = 60/382 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS+ + R V + ++A G AH+L L V+ G N+ GQ
Sbjct: 72 WGGNGSGQLGTGSVSFQ-RVVAQQVPGLTDVTSIAAGDAHSLALRADRTVWTWGGNNAGQ 130
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+G N+ P ++ GL +VV ++ G HS A+ DG ++ WG N GQLG G +
Sbjct: 131 VGDGTNVDRP-TPQKVPGLS-DVVAVAAGEFHSLALRADGTVWAWGSNFYGQLGRGH--S 186
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P P +V L+G+ A GF+ S+AV G V +WGA GSG+LG G L
Sbjct: 187 QPGPSPAQVVGLTGVVALAA--GFDFSLAVRSDGTVWAWGANGSGQLGDGTYIQRL---- 240
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + +L+GV AG H+ + +G V+ +G + +M +G RPS
Sbjct: 241 -----APTQVSQLQGVSA--VTAGLYHALALRSDGTVWAWGSNSSGQM--GDGTWTDRPS 291
Query: 283 ----------------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
L+ G ++ WG N G LGIG+ P RV+G
Sbjct: 292 PVQVTSIARAKAVAAQDAGSLVLLDDGGVFAWGLNSQGQLGIGTTADSPLPVRVRG---L 348
Query: 321 SPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
V ++ G +H + ++G + TW GH + GQLGHG+ + P +V
Sbjct: 349 GAVTSLAAGTQHAVVLRADGTLWTW------------GHGATGQLGHGSSERMLSPEVVT 396
Query: 380 FGENVKALQVSCGFNHTGALLE 401
NV + V+ G H+ A L
Sbjct: 397 RLSNVAS--VASGSFHSVAALS 416
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 157/362 (43%), Gaps = 85/362 (23%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ ESR P+ + ++ A+A HTL L G V+A G N FGQ
Sbjct: 1128 WGGNADGQLGDGTTESRATPITVAGLG--AMVAVAPAARHTLALRSDGTVWAWGDNTFGQ 1185
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG N +L P+++ GL+K V I+ G +HS A+ DG ++ WG N GQLG G A
Sbjct: 1186 LGDGSNTRRTL-PVQVVGLEK-VTAIAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDA 1243
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG----------GKVLSWGAGGSGRLGHG 212
+ +PT++ LG + +VAV GG G + + G G+LG G
Sbjct: 1244 RA--VPTRM------------LGLDGAVAVAGGEYHSLMLRFDGTLWATGNNSHGQLGEG 1289
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
T+ +P + EL+ +V+ AG HS + E+G V
Sbjct: 1290 T---------FTNRLSPFQVVELD--QVRTVRAGGYHSVALREDGTV------------- 1325
Query: 273 QEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 332
+TWG N G LG G++ P V G + + V G H
Sbjct: 1326 -----------------WTWGHNGQGQLGDGTVTTRRVPAPVPG---LTAIASVGAGTSH 1365
Query: 333 TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
T A+ TW W G +S GQLG G+ D + PT+V VK++
Sbjct: 1366 TFAVGS---ETWAW----------GRNSHGQLGTGDSSDRLEPTLVKGLHGVKSVLAGGD 1412
Query: 393 FN 394
F+
Sbjct: 1413 FS 1414
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 115/378 (30%), Positives = 167/378 (44%), Gaps = 57/378 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G S+ P + ALA G +L + G V+A G N GQ
Sbjct: 173 WGSNFYGQLGRG--HSQPGPSPAQVVGLTGVVALAAGFDFSLAVRSDGTVWAWGANGSGQ 230
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I L P ++S L+ V ++ G +H+ A+ DG ++ WG NS+GQ+G G
Sbjct: 231 LGDGTYI-QRLAPTQVSQLQG-VSAVTAGLYHALALRSDGTVWAWGSNSSGQMGDGTWTD 288
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V+ S K A S+ + G V +WG G+LG G
Sbjct: 289 R----PSPVQVTSIARAKAVAAQDAGSLVLLDDGGVFAWGLNSQGQLGIG---------- 334
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV--------DKMLFQE 274
T+ +P ++ V AAG H+ + +G ++ +G A ++ML E
Sbjct: 335 -TTADSPLPVRVRGLGAVTSLAAGTQHAVVLRADGTLWTWGHGATGQLGHGSSERMLSPE 393
Query: 275 -----GNHARRPS-------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
N A S +S G ++TWG N NG LG G+ H P RV G S
Sbjct: 394 VVTRLSNVASVASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTERHLPVRVPG---LSG 450
Query: 323 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
V VS H+ A+ S+G + WGW G ++ GQ+G G D P V
Sbjct: 451 VVSVSASGHHSFALRSDGTV--WGW----------GRNAQGQMGDGTTKDRASPARVEGL 498
Query: 382 ENVKALQVSCGFNHTGAL 399
+VKAL + G +H AL
Sbjct: 499 SSVKAL--ASGGSHMVAL 514
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 157/373 (42%), Gaps = 55/373 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R P S + + A+ G H L L G V+A G N GQ
Sbjct: 223 WGANGSGQLGDGTYIQRLAPTQVSQLQ--GVSAVTAGLYHALALRSDGTVWAWGSNSSGQ 280
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+G P++++ + + ++ S + DG ++ WG NS GQLG+G A
Sbjct: 281 MGDGTWTDRP-SPVQVTSIARAKA-VAAQDAGSLVLLDDGGVFAWGLNSQGQLGIGTTAD 338
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P+P +V L G T AA G + +V + G + +WG G +G+LGHG +L
Sbjct: 339 S--PLPVRVRGL-GAVTSLAA-GTQHAVVLRADGTLWTWGHGATGQLGHGSSERML---- 390
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV----DKMLFQEGNHA 278
+P ++ L V A+G HS +G V+ +G D +
Sbjct: 391 -----SPEVVTRLS--NVASVASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTERHLPV 443
Query: 279 RRP----------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
R P +L S G ++ WG N G +G G+ SP RV+G S
Sbjct: 444 RVPGLSGVVSVSASGHHSFALRSDGTVWGWGRNAQGQMGDGTTKDRASPARVEG---LSS 500
Query: 323 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
V ++ G H A+ ++G + TWG+ G+ GQLG G D P V
Sbjct: 501 VKALASGGSHMVALRTDGTVWTWGYNGA------------GQLGDGTTTDRRAPVQVTGL 548
Query: 382 ENVKALQVSCGFN 394
V ++ F+
Sbjct: 549 SGVTSVAAGAYFS 561
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 163/388 (42%), Gaps = 68/388 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLND 99
WG G+LG G+L R S E L +A G AH L +++ G V+A G N
Sbjct: 873 WGANGSGQLGDGTLGDR-----ASPLEVKGLAGIATGVMGEAHALVVSQDGTVWAWGANG 927
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG S P+R++GL + +S G +S A+ DG ++ WG N +GQLG G
Sbjct: 928 RGQLGDGTTT-SSASPVRVAGLSA-AMNVSVGQAYSLAVLPDGTVWSWGANDSGQLGDGT 985
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
A+ P P V+ L+ + K G VAV G V WGA G++G G
Sbjct: 986 NVARTTPKP--VQDLADV--KAVTAGAHHVVAVRHDGTVWGWGANAFGQVGDGTH----- 1036
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F R L+ +E +AG HS + + R +G ++ E +
Sbjct: 1037 FWRFRPVRVEGLLNAVE------TSAGEQHSLALLGDERALSWGSHEYGQLGDAESGPSL 1090
Query: 280 RP-------------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
P +L++ G + TWG N +G LG G+ + +P V
Sbjct: 1091 EPVGVKLPSSKVLVPAVSVSAWHQHAAALLADGTVQTWGGNADGQLGDGTTESRATPITV 1150
Query: 315 QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
G + V + +HT A+ S+G + WG TF GQLG G++
Sbjct: 1151 AGLGAMVAVAPAA---RHTLALRSDGTVWAWG----DNTF--------GQLGDGSNTRRT 1195
Query: 374 HPTIVNFGENVKALQVSCGFNHTGALLE 401
P V E V A ++ G H+ A+ E
Sbjct: 1196 LPVQVVGLEKVTA--IAAGSYHSLAVRE 1221
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 164/380 (43%), Gaps = 61/380 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+ G G + R VV A S +K L H L + E G + G N FG
Sbjct: 673 WGGNAYGQFGDGGVTPR---VVAGAVPGLSGIKLLGASYLHVLAVREDGMLLTWGYNRFG 729
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+ G+S P+++ GL + ++S G HS + DG + WG+N++GQLG G
Sbjct: 730 QLGLGA-AGWSSLPVQVRGLGQGR-RLSAGRAHSLLVRADGTVLAWGQNTSGQLGDGSTT 787
Query: 162 AKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P+ + + C + A+ G + S+ + G V SWG G+LG G
Sbjct: 788 HRASPVLARNLPC-----ARAASAGRQHSLVLACDGTVWSWGGNSQGQLGDGGV------ 836
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF-------------GDRAV 267
TS P ++ L GV + AG S + +G V+ + GDRA
Sbjct: 837 ---TSRAYPAKVEGLWGVVAVL--AGGDSSMVLRADGTVWTWGANGSGQLGDGTLGDRAS 891
Query: 268 DKML-----FQEGNHARRPSLI--SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
+ G +L+ G ++ WG+N G LG G+ SP RV G
Sbjct: 892 PLEVKGLAGIATGVMGEAHALVVSQDGTVWAWGANGRGQLGDGTTTSSASPVRVAG---L 948
Query: 321 SPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
S VS G ++ A + +G + +W G + GQLG G +V P V
Sbjct: 949 SAAMNVSVGQAYSLAVLPDGTVWSW------------GANDSGQLGDGTNVARTTPKPVQ 996
Query: 380 FGENVKALQVSCGFNHTGAL 399
+VKA V+ G +H A+
Sbjct: 997 DLADVKA--VTAGAHHVVAV 1014
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 124/281 (44%), Gaps = 41/281 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G+LG GS R PV EK + A+A G H+L + E G V+A G N FGQ
Sbjct: 1178 WGDNTFGQLGDGSNTRRTLPVQVVGLEK--VTAIAAGSYHSLAVREDGTVWAWGYNVFGQ 1235
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P R+ GL V ++ G +HS + DG L+ G NS+GQLG G
Sbjct: 1236 LG-DGTMDARAVPTRMLGLDGAVA-VAGGEYHSLMLRFDGTLWATGNNSHGQLGEGTFTN 1293
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P +V L + T +A G SVA+ G V +WG G G+LG G
Sbjct: 1294 RLSPF--QVVELDQVRTVRA--GGYHSVALREDGTVWTWGHNGQGQLGDGTV-------- 1341
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T+ P + L IA+ G S + +G + ++ + + P+
Sbjct: 1342 -TTRRVPAPVPGL----TAIASVGAGTSHTFAVGSETWAWGRNSHGQLGTGDSSDRLEPT 1396
Query: 283 LISG--------------------GELYTWGSNENGCLGIG 303
L+ G G +WG+N +G LGIG
Sbjct: 1397 LVKGLHGVKSVLAGGDFSVAQGADGSAMSWGTNVHGTLGIG 1437
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 134/343 (39%), Gaps = 87/343 (25%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G++G G+ R PV ++ + KA+A A +L L + G V+A GLN GQ
Sbjct: 273 WGSNSSGQMGDGTWTDRPSPVQVTSIAR--AKAVAAQDAGSLVLLDDGGVFAWGLNSQGQ 330
Query: 103 LGISENIGYSLEPLRISGL----------------------------------------- 121
LGI L P+R+ GL
Sbjct: 331 LGIGTTADSPL-PVRVRGLGAVTSLAAGTQHAVVLRADGTLWTWGHGATGQLGHGSSERM 389
Query: 122 -KKEVV-------QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
EVV +++G HS A DG ++ WG+N+NGQLG G + +P+ +V
Sbjct: 390 LSPEVVTRLSNVASVASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTERHLPV--RVPG 447
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
LSG+ + A+ S A+ G V WG G++G G + +P ++
Sbjct: 448 LSGVVSVSAS--GHHSFALRSDGTVWGWGRNAQGQMGDGT---------TKDRASPARVE 496
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG------- 286
L VK A+G H + +G V+ +G ++ R P ++G
Sbjct: 497 GLS--SVKALASGGSHMVALRTDGTVWTWGYNGAGQLGDGTTTDRRAPVQVTGLSGVTSV 554
Query: 287 -------------GELYTWGSNENGCLGIGSIDVLHSPERVQG 316
G ++ WG G LG G+ SP +V G
Sbjct: 555 AAGAYFSLALRTDGTVWAWGDGFEGQLGDGAGVQRASPVQVTG 597
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 148/356 (41%), Gaps = 59/356 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G G+LG G+ R PV + + + LA G AH L + + G V+A G N GQ
Sbjct: 573 WGDGFEGQLGDGAGVQRASPVQVTGLTR--VVKLAAGAAHGLAVRDDGTVWAWGDNTEGQ 630
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+G + +++ GL V + G +HS A+ DG L WG N+ GQ G G
Sbjct: 631 MG-DGSWSDRFRAVQVYGLTG-VSSVVGGLYHSMALAQDGTLRAWGGNAYGQFGDGGVTP 688
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE--SSILGF 220
+V + V LSGI K + +AV G +L+WG G+LG G SS+
Sbjct: 689 RV--VAGAVPGLSGI--KLLGASYLHVLAVREDGMLLTWGYNRFGQLGLGAAGWSSL--- 741
Query: 221 LRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P ++ L +G ++ +AG HS + +G V +G ++ H
Sbjct: 742 --------PVQVRGLGQGRRL---SAGRAHSLLVRADGTVLAWGQNTSGQLGDGSTTHRA 790
Query: 280 RPSLISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
P L G +++WG N G LG G + P +V+G +
Sbjct: 791 SPVLARNLPCARAASAGRQHSLVLACDGTVWSWGGNSQGQLGDGGVTSRAYPAKVEGLWG 850
Query: 320 ESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
V ++ G ++G + TWG GS GQLG G D P
Sbjct: 851 VVAV--LAGGDSSMVLRADGTVWTWGANGS------------GQLGDGTLGDRASP 892
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 113/297 (38%), Gaps = 60/297 (20%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG-----KKAAKVIPIPTKV 171
R L +++ G HS +T G ++ WG N +GQLG G + A+ +P T V
Sbjct: 42 RSQALASATSKVAAGAQHSLYVTQAGTVWAWGGNGSGQLGTGSVSFQRVVAQQVPGLTDV 101
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
+ A G S+A+ V +WG +G++G G R T + P L
Sbjct: 102 TSI--------AAGDAHSLALRADRTVWTWGGNNAGQVGDGTNVD-----RPTPQKVPGL 148
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----- 286
V AAG HS + +G V+ +G ++ P+ + G
Sbjct: 149 ------SDVVAVAAGEFHSLALRADGTVWAWGSNFYGQLGRGHSQPGPSPAQVVGLTGVV 202
Query: 287 ---------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 331
G ++ WG+N +G LG G+ +P +V V V+ G
Sbjct: 203 ALAAGFDFSLAVRSDGTVWAWGANGSGQLGDGTYIQRLAPTQVS---QLQGVSAVTAGLY 259
Query: 332 HTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 387
H A+ S+G + W G +S GQ+G G D P V KA+
Sbjct: 260 HALALRSDGTVWAW------------GSNSSGQMGDGTWTDRPSPVQVTSIARAKAV 304
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 109/257 (42%), Gaps = 53/257 (20%)
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P + + L+ +K AA G + S+ VT G V +WG GSG+LG G S F R +
Sbjct: 38 PPAARSQALASATSKVAA-GAQHSLYVTQAGTVWAWGGNGSGQLGTGSVS----FQRVVA 92
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--- 282
+ P L V AAG HS + + V+ +G ++ +G + RP+
Sbjct: 93 QQVPGL------TDVTSIAAGDAHSLALRADRTVWTWGGNNAGQV--GDGTNVDRPTPQK 144
Query: 283 -------------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
L + G ++ WGSN G LG G SP +V G + V
Sbjct: 145 VPGLSDVVAVAAGEFHSLALRADGTVWAWGSNFYGQLGRGHSQPGPSPAQVVG---LTGV 201
Query: 324 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 382
++ G+ + A+ S+G + WG GS GQLG G + + PT V+ +
Sbjct: 202 VALAAGFDFSLAVRSDGTVWAWGANGS------------GQLGDGTYIQRLAPTQVSQLQ 249
Query: 383 NVKALQVSCGFNHTGAL 399
V A V+ G H AL
Sbjct: 250 GVSA--VTAGLYHALAL 264
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFL-TETGCVYATGLNDFG 101
WG+ G+LG G++ +R P ++ ++ G +HT + +ET +A G N G
Sbjct: 1328 WGHNGQGQLGDGTVTTRRVPAPVPGLT--AIASVGAGTSHTFAVGSET---WAWGRNSHG 1382
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG ++ LEP + GL V + G S A DG WG N +G LG+G
Sbjct: 1383 QLGTGDS-SDRLEPTLVKGLHG-VKSVLAGGDFSVAQGADGSAMSWGTNVHGTLGIGLPG 1440
Query: 162 AKVIP 166
+ +P
Sbjct: 1441 QRTVP 1445
>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
(Silurana) tropicalis]
Length = 4842
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/320 (32%), Positives = 160/320 (50%), Gaps = 42/320 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4033 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4092
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4093 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 4151
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G+ Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4152 TSNK--KLPERVTALEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKLGLGN----- 4204
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4205 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4260
Query: 278 ARRPSLI----------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
RP L+ + GE+Y WGSN G LG+G + + P V
Sbjct: 4261 -NRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGLGHTNHVREPTLVT 4319
Query: 316 GPFSESPVDQVSCGWKHTAA 335
+ Q+S G H+AA
Sbjct: 4320 A-LQGKNIRQISAGRCHSAA 4338
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 127/246 (51%), Gaps = 14/246 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4087 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 4146
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ + Q++ G +H+ A++ DG L + +G G+LGLG
Sbjct: 4147 LGLGNTSNKKL-PERVTALEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKLGLGNS 4205
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4206 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4255
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+L+ L G+ + A G H+ + +G VY +G + ++ NH R
Sbjct: 4256 -RARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGLGHTNHVRE 4314
Query: 281 PSLISG 286
P+L++
Sbjct: 4315 PTLVTA 4320
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 157/335 (46%), Gaps = 51/335 (15%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+G+LG N P I G K VV +S GY HS+A+T DGELY WG+ G+LG
Sbjct: 487 YGKLGHG-NSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESS 216
G ++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG +
Sbjct: 546 GDSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNR 601
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ Y P++++ L+G+ + AG S + G+VY +G A E
Sbjct: 602 V---------YKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT 652
Query: 277 HARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPER 313
A RP LI E+Y WG+N G G G S + P++
Sbjct: 653 -ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKK 711
Query: 314 VQGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
V G + Q+S G H TA + +++ W
Sbjct: 712 VSG-LDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 VVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPCFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG S T +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNSS--------TQKY-PKLIQGTLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P +V
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVVEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFTRKVCAGSQSSLAL 629
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4012 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4069
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4070 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4120
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4121 SCGFKHSAVVTADGKLFTFGN----------GDYGR--------------------LGLG 4150
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S L W +G DG G+
Sbjct: 4151 NTSNKKLPERVTA-LEGLHIGQVACGLNHTLAVSADGSLVWAFG--------DGDY--GK 4199
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4200 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4235
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 77/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + + + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L G+ +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P + L+ ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+GV ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGVAIQQISAGTSHS 730
>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
boliviensis boliviensis]
Length = 4860
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 159/319 (49%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4111 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4169
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G V+ ++G G G+LG G
Sbjct: 4170 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGN----- 4222
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4223 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4278
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R +L S G++Y WGSN G LG+G + + P V G
Sbjct: 4279 NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4338
Query: 317 PFSESPVDQVSCGWKHTAA 335
V Q+S G H+AA
Sbjct: 4339 -LQGKNVRQISAGRCHSAA 4356
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 129/246 (52%), Gaps = 14/246 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4164
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG ++ +G G+LGLG
Sbjct: 4165 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNS 4223
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4224 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4273
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4274 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4332
Query: 281 PSLISG 286
P+L++G
Sbjct: 4333 PTLVTG 4338
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4087
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4088 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4138
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4139 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4168
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4169 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSVVWAFG--------DGDY--GK 4217
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4218 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4253
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|260814720|ref|XP_002602062.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
gi|229287367|gb|EEN58074.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
Length = 3971
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 180/383 (46%), Gaps = 73/383 (19%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + + + SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 3238 GEGSYGRLGQGNSDDLHQLTIISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 3297
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +E++Q++ G+ HS+ ++ DG+L+ +G G+LGLG
Sbjct: 3298 GKLGHG-NSDRQRRPRQIEALQGEEIIQMACGFKHSAVVSADGKLFTFGNGDYGRLGLGN 3356
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSIL 218
+ K IP +V L G Q G ++AV+ G V S+G G G+LG G
Sbjct: 3357 TSNKK--IPERVTALEGQMVGQVGCGLNHTLAVSADGNTVWSFGDGDYGKLGLGN----- 3409
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ TP+ + L G+ VK G S + ++GRV+ FG +R + + + NH
Sbjct: 3410 ----STAKSTPQRVDPLCGIGVKKVCCGTQFSVALTKDGRVFTFGQERLIGQPESRSRNH 3465
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R +L S GE++ WGSN +G LGIG + P V
Sbjct: 3466 NRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGIGDTNARREPCLVTA 3525
Query: 317 PFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 376
+GK + W GS+G GQLG G+ P
Sbjct: 3526 --------------------LQGKNVRQVW-GSNG---------DGQLGIGDTNARREPC 3555
Query: 377 IVNF--GENVKALQVSCGFNHTG 397
+V G+NV+ Q+S G NH+G
Sbjct: 3556 LVTDLQGKNVR--QISAGRNHSG 3576
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 146/297 (49%), Gaps = 19/297 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + +ACG H+ ++ G ++ G D+G+
Sbjct: 3292 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEIIQMACGFKHSAVVSADGKLFTFGNGDYGR 3351
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
LG+ N P R++ L+ ++V Q+ G +H+ A++ DG ++ +G G+LGLG
Sbjct: 3352 LGLG-NTSNKKIPERVTALEGQMVGQVGCGLNHTLAVSADGNTVWSFGDGDYGKLGLGNS 3410
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P +V+ L GI K+ G + SVA+T G+V ++ G RL ES
Sbjct: 3411 TAKS--TPQRVDPLCGIGVKKVCCGTQFSVALTKDGRVFTF---GQERLIGQPES----- 3460
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
RS + P+ + LE V+ G HS + G V+ +G ++ + N R
Sbjct: 3461 -RSRNHNRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGIGDTNARRE 3519
Query: 281 PSLISGGE----LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 333
P L++ + WGSN +G LGIG + P V V Q+S G H+
Sbjct: 3520 PCLVTALQGKNVRQVWGSNGDGQLGIGDTNARREPCLVTD-LQGKNVRQISAGRNHS 3575
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 125/302 (41%), Gaps = 58/302 (19%)
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQL G SL ++ + QI G + + I +G + G+ S G+LG G
Sbjct: 3194 GQLA---ETGRSLLTPTVTPSFSQAQQIICGQNCTFVIQANGTVQACGEGSYGRLGQGN- 3249
Query: 161 AAKVIPIPTKVECLSGIFTKQ--AALGFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ + T + L G Q + G + S+A+T G+V SWG G G+LGHG
Sbjct: 3250 -SDDLHQLTIISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGN---- 3304
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S + PR I+ L+G ++ A GF HSA + +G+++ FG+ G++
Sbjct: 3305 -----SDRQRRPRQIEALQGEEIIQMACGFKHSAVVSADGKLFTFGN----------GDY 3349
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
R LG+G+ PERV V QV CG HT A+S
Sbjct: 3350 GR--------------------LGLGNTSNKKIPERVTA-LEGQMVGQVGCGLNHTLAVS 3388
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
W +G DG G+LG GN P V+ + +V CG +
Sbjct: 3389 ADGNTVWSFG--------DGDY--GKLGLGNSTAKSTPQRVDPLCGIGVKKVCCGTQFSV 3438
Query: 398 AL 399
AL
Sbjct: 3439 AL 3440
>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
[Xenopus laevis]
gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
Length = 1050
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 172/362 (47%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLG-SLESRW-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+LG G SL++ P C+ +K +ACGG HTLFL E G VY+ G N
Sbjct: 4 WGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGE 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG S P ++ L +E + I+ G HS A+++ G LY WG ++GQLG
Sbjct: 64 GQLGHSHE---GTHPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLG-HA 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
IP ++ LS +Q + G + +A+ G++ +WG G+LG G G
Sbjct: 120 TVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGN-----G 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F+ S+ +P+ +K LEG+ + AG G+H+
Sbjct: 175 FI---SQSSPQKVKSLEGIPLAQVTAG----------------------------GSHSF 203
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE- 338
SL G ++ WG N G LG+ V +P V+ P V +SCG +HTA +++
Sbjct: 204 ALSL--SGAVFGWGKNSAGQLGLNDEQVKETPCHVK-PLRTHKVVYISCGEEHTAILTKA 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GGS GQLGH + + I+P V + Q++CG HT A
Sbjct: 261 GGLFTFGAGGS------------GQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHTLA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 122/276 (44%), Gaps = 42/276 (15%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G+ G+LG ++E R P + + ++ ++CG H L L + G ++ G N G
Sbjct: 108 WGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHG 167
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ P ++ L+ + Q++ G HS A+++ G ++ WGKNS GQLGL +
Sbjct: 168 QLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQLGLNDE 227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
K P V+ L + G E + +T G + ++GAGGSG+LGH +
Sbjct: 228 QVK--ETPCHVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSLHN---- 281
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
E PR + EL G +V A G H+
Sbjct: 282 -----EINPRRVLELMGSEVSQIACGRKHTLAF--------------------------- 309
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
+ S G LY +G + G LG G + + P V+G
Sbjct: 310 --VPSSGTLYAFGCGDLGQLGTGHENNVKCPTVVKG 343
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 92/224 (41%), Gaps = 41/224 (18%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG G+LG+G + SE P VK A G H+ + E+G
Sbjct: 1 MLCWGHSAFGQLGNGH-----SLKNAVSE--PCACTFSLATCVKEVACGGKHTLFLMEDG 53
Query: 258 RVYIFGDRAVDKM-LFQEGNHARRPSLIS-------------------GGELYTWGSNEN 297
+VY G ++ EG H + ++ G LY+WG+ +
Sbjct: 54 QVYSCGWNGEGQLGHSHEGTHPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGND 113
Query: 298 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSED 356
G LG +++ R+ S+ + Q+SCG H A+ +G++ TW
Sbjct: 114 GQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTW------------ 161
Query: 357 GHSSGGQLGHGND-VDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G ++ GQLG GN + P V E + QV+ G +H+ AL
Sbjct: 162 GQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFAL 205
>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
Full=HECT domain and RCC1-like domain-containing protein
1; AltName: Full=p532; AltName: Full=p619
gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
Length = 4861
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 159/319 (49%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4112 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R +L S G++Y WGSN G LG+G + + P V G
Sbjct: 4280 NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4339
Query: 317 PFSESPVDQVSCGWKHTAA 335
V Q+S G H+AA
Sbjct: 4340 -LQGKNVRQISAGRCHSAA 4357
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 129/246 (52%), Gaps = 14/246 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLISG 286
P+L++G
Sbjct: 4334 PTLVTG 4339
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4088
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4139
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4140 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4169
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4170 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4218
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P ++ + +V+CG + AL
Sbjct: 4219 LGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4254
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 [Pongo abelii]
Length = 4864
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 159/319 (49%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4055 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4114
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4115 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4173
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4174 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4226
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4227 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4282
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R +L S G++Y WGSN G LG+G + + P V G
Sbjct: 4283 NRPQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4342
Query: 317 PFSESPVDQVSCGWKHTAA 335
V Q+S G H+AA
Sbjct: 4343 -LQGKNVRQISAGRCHSAA 4360
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 129/246 (52%), Gaps = 14/246 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4109 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4168
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4169 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4228 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4277
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4278 -RARNHNRPQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4336
Query: 281 PSLISG 286
P+L++G
Sbjct: 4337 PTLVTG 4342
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4034 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4091
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4092 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4142
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4143 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4172
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4173 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4221
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P ++ + +V+CG + AL
Sbjct: 4222 LGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4257
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
Length = 4861
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 159/319 (49%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4112 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R +L S G++Y WGSN G LG+G + + P V G
Sbjct: 4280 NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4339
Query: 317 PFSESPVDQVSCGWKHTAA 335
V Q+S G H+AA
Sbjct: 4340 -LQGKNVRQISAGRCHSAA 4357
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 129/246 (52%), Gaps = 14/246 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLISG 286
P+L++G
Sbjct: 4334 PTLVTG 4339
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4088
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4139
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4140 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4169
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4170 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4218
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P ++ + +V+CG + AL
Sbjct: 4219 LGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4254
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4846
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 159/319 (49%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4037 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4096
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4097 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4155
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4156 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4208
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4209 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4264
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R +L S G++Y WGSN G LG+G + + P V G
Sbjct: 4265 NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4324
Query: 317 PFSESPVDQVSCGWKHTAA 335
V Q+S G H+AA
Sbjct: 4325 -LQGKNVRQISAGRCHSAA 4342
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 129/246 (52%), Gaps = 14/246 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4091 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4150
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4151 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4209
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4210 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4259
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L G+ ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4260 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4318
Query: 281 PSLISG 286
P+L++G
Sbjct: 4319 PTLVTG 4324
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4016 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4073
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4074 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4124
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4125 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4154
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4155 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4203
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P ++ + +V+CG + AL
Sbjct: 4204 LGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4239
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4853
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 159/319 (49%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4044 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4103
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4104 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4162
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4163 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4215
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4216 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4271
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R +L S G++Y WGSN G LG+G + + P V G
Sbjct: 4272 NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4331
Query: 317 PFSESPVDQVSCGWKHTAA 335
V Q+S G H+AA
Sbjct: 4332 -LQGKNVRQISAGRCHSAA 4349
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 129/246 (52%), Gaps = 14/246 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4098 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4157
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4158 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4216
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4217 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4266
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L G+ ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4267 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4325
Query: 281 PSLISG 286
P+L++G
Sbjct: 4326 PTLVTG 4331
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4023 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4080
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4081 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4131
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4132 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4161
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4162 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4210
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P ++ + +V+CG + AL
Sbjct: 4211 LGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4246
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
mulatta]
Length = 4824
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 159/319 (49%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4015 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4074
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4075 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4133
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4134 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4186
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4187 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4242
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R +L S G++Y WGSN G LG+G + + P V G
Sbjct: 4243 NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4302
Query: 317 PFSESPVDQVSCGWKHTAA 335
V Q+S G H+AA
Sbjct: 4303 -LQGKNVRQISAGRCHSAA 4320
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 129/246 (52%), Gaps = 14/246 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4069 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4128
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4129 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4187
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4188 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4237
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L G+ ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4238 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4296
Query: 281 PSLISG 286
P+L++G
Sbjct: 4297 PTLVTG 4302
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 3994 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4051
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4052 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4102
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4103 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4132
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4133 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4181
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P ++ + +V+CG + AL
Sbjct: 4182 LGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4217
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4854
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 159/319 (49%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4045 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4104
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4105 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4163
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4164 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4216
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4217 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4272
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R +L S G++Y WGSN G LG+G + + P V G
Sbjct: 4273 NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4332
Query: 317 PFSESPVDQVSCGWKHTAA 335
V Q+S G H+AA
Sbjct: 4333 -LQGKNVRQISAGRCHSAA 4350
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 129/246 (52%), Gaps = 14/246 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4099 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4158
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4159 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4217
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4218 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4267
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L G+ ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4268 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4326
Query: 281 PSLISG 286
P+L++G
Sbjct: 4327 PTLVTG 4332
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4024 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4081
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4082 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4132
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4133 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4162
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4163 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4211
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P ++ + +V+CG + AL
Sbjct: 4212 LGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4247
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4861
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 159/319 (49%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4112 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R +L S G++Y WGSN G LG+G + + P V G
Sbjct: 4280 NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4339
Query: 317 PFSESPVDQVSCGWKHTAA 335
V Q+S G H+AA
Sbjct: 4340 -LQGKNVRQISAGRCHSAA 4357
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 129/246 (52%), Gaps = 14/246 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L G+ ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLISG 286
P+L++G
Sbjct: 4334 PTLVTG 4339
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4088
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4139
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4140 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4169
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4170 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4218
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P ++ + +V+CG + AL
Sbjct: 4219 LGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4254
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
anubis]
Length = 3314
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 159/319 (49%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 2505 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 2564
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 2565 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 2623
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 2624 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 2676
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 2677 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 2732
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R +L S G++Y WGSN G LG+G + + P V G
Sbjct: 2733 NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 2792
Query: 317 PFSESPVDQVSCGWKHTAA 335
V Q+S G H+AA
Sbjct: 2793 -LQGKNVRQISAGRCHSAA 2810
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 129/246 (52%), Gaps = 14/246 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 2559 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 2618
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 2619 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 2677
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 2678 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 2727
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L G+ ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 2728 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 2786
Query: 281 PSLISG 286
P+L++G
Sbjct: 2787 PTLVTG 2792
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 2484 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 2541
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 2542 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 2592
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 2593 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 2622
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 2623 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 2671
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P ++ + +V+CG + AL
Sbjct: 2672 LGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 2707
>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
Length = 306
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 160/341 (46%), Gaps = 59/341 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG G +++ +P + AF +++ ++CG HT L E G V+ G +FGQ
Sbjct: 11 WGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGRGNFGQ 70
Query: 103 LGISENIGYSLE-PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG ++ ++ P +S L+ K V Q++ G+HH+ A+ +G+LY WG G+LG G +
Sbjct: 71 LGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYGRLGHGDE 130
Query: 161 AAKVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P VE L G T AA GF SV + GG +L+WG G G+LGHG E
Sbjct: 131 VRQ--ASPKLVESLQGKEVTFVAAGGFHSSVIIE-GGNLLTWGGGYFGQLGHGDE----- 182
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
T TP+++K ++ A G H+ + ++
Sbjct: 183 ----TDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQS----------------------- 215
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SE 338
E++TWGS E G LGIG + P + V +S G H+AA+ SE
Sbjct: 216 -------QEVWTWGSGEFGKLGIGDEEKHAEPIMIT-ALQGVGVIHISTGGFHSAALTSE 267
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
G + TWG G GQLGHG++ P +V
Sbjct: 268 GVLYTWGGGDK------------GQLGHGDENSQNIPVVVE 296
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 76/130 (58%), Gaps = 2/130 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG G R P + ++ +ACG HTL LT++ V+ G +FG+
Sbjct: 169 WGGGYFGQLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGK 228
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LGI + ++ EP+ I+ L+ V+ ISTG HS+A+T +G LY WG GQLG G +
Sbjct: 229 LGIGDEEKHA-EPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHGDEN 287
Query: 162 AKVIPIPTKV 171
++ IP+ +V
Sbjct: 288 SQNIPVVVEV 297
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 106/233 (45%), Gaps = 49/233 (21%)
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G +V SWG G G+LGHG E + + PRL+ G V+ + G H+A +
Sbjct: 5 GSEVYSWGQGVLGQLGHGDEKT---------QRQPRLVVAFLGFNVRQVSCGNQHTAILM 55
Query: 255 ENGRVYIFGDRAVDKMLFQ-----------------EGNHARRPS--------LISGGEL 289
ENG V+ FG R L Q +G H ++ + LI G+L
Sbjct: 56 ENGEVFTFG-RGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQL 114
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWGWGG 348
YTWGS E G LG G SP+ V+ V V+ G H++ I EG +LTWG
Sbjct: 115 YTWGSGEYGRLGHGDEVRQASPKLVE-SLQGKEVTFVAAGGFHSSVIIEGGNLLTWG--- 170
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G F GQLGHG++ D P +V + A +V+CG +HT L +
Sbjct: 171 -GGYF--------GQLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQ 214
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 127/281 (45%), Gaps = 47/281 (16%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E+Y WG+ GQLG G + K P V G +Q + G + + + G+V ++G
Sbjct: 7 EVYSWGQGVLGQLGHGDE--KTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFG 64
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G G+LG G +S+ + + TP L+ L+G VK A G+ H+ + +NG++Y +
Sbjct: 65 RGNFGQLGQG--ASV-----TANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYTW 117
Query: 263 GDRAVDKMLFQEGNHARRPS------------------------LISGGELYTWGSNENG 298
G ++ G+ R+ S +I GG L TWG G
Sbjct: 118 GSGEYGRL--GHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFG 175
Query: 299 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGH 358
LG G +P+ V+G + +V+CG HT +++ + + W WG G F
Sbjct: 176 QLGHGDETDRKTPKMVKG-VQQCIAHEVACGTHHTLMLTQSQEV-WTWGS--GEF----- 226
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G+LG G++ + P ++ + V + +S G H+ AL
Sbjct: 227 ---GKLGIGDEEKHAEPIMITALQGVGVIHISTGGFHSAAL 264
>gi|145594515|ref|YP_001158812.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303852|gb|ABP54434.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 554
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 166/386 (43%), Gaps = 56/386 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ +R PV ++ ALA GG+H+L LT+TG V A G N GQ
Sbjct: 62 WGDNFSGQLGDGTTTARSTPVTVGLPAGTTITALAAGGSHSLALTDTGVVLAWGSNSRGQ 121
Query: 103 LGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG S P+ + GL + ++ G HS A+T G + WG NSNGQLG G
Sbjct: 122 LGDGTTTDRS-TPVTV-GLPAGTTITALAAGRRHSLALTDTGAVLAWGSNSNGQLGDGTT 179
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A+ P+ + + I A+ S+A+T G L+WG+ G+LG G
Sbjct: 180 TARSTPVTVGLPAGTTITALAAS---TYSLALTDTGAALAWGSNSRGQLGDGT------- 229
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T TP + G + AA + HS + + G V +G + ++ +G R
Sbjct: 230 --TTDRSTPVTVSLPAGTTITALAASYDHSLALTDTGAVLAWGSNSNGQL--GDGTTTNR 285
Query: 281 PS------------------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
+ L S G + WGSN NG LG G+ +P V
Sbjct: 286 STPVTVGLPAGTTITALAAGRSHTLVLTSAGAVLAWGSNSNGQLGDGTTTDRSTPVTVGL 345
Query: 317 PFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
P + + ++ G+ H+ A+++ G +L WG G S+ GQLG G D P
Sbjct: 346 PAGTT-ITALAAGYYHSLALTDTGAVLAWG-GNSY-----------GQLGDGTTTDRSTP 392
Query: 376 TIVNFGENVKALQVSCGFNHTGALLE 401
V + NH AL+
Sbjct: 393 VTVGLPAGTTITVLVSMDNHGMALVA 418
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 20/118 (16%)
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 350
WG N +G LG G+ +P V P + + ++ G H+ A+++ G +L WG
Sbjct: 62 WGDNFSGQLGDGTTTARSTPVTVGLPAGTT-ITALAAGGSHSLALTDTGVVLAWG----- 115
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNF--GENVKALQV----SCGFNHTGALLEY 402
+S GQLG G D P V G + AL S TGA+L +
Sbjct: 116 -------SNSRGQLGDGTTTDRSTPVTVGLPAGTTITALAAGRRHSLALTDTGAVLAW 166
>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
gorilla gorilla]
Length = 4502
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 159/319 (49%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 3693 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 3752
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 3753 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 3811
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 3812 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 3864
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 3865 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 3920
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R +L S G++Y WGSN G LG+G + + P V G
Sbjct: 3921 NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTVVTG 3980
Query: 317 PFSESPVDQVSCGWKHTAA 335
V Q+S G H+AA
Sbjct: 3981 -LQGKNVRQISAGRCHSAA 3998
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 129/246 (52%), Gaps = 14/246 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 3747 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 3806
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 3807 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 3865
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 3866 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 3915
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 3916 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 3974
Query: 281 PSLISG 286
P++++G
Sbjct: 3975 PTVVTG 3980
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 168/363 (46%), Gaps = 66/363 (18%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSL-------------------------- 627
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
+L S G++Y WG CLG GS + ++ + + + VS G H A+S
Sbjct: 628 ----ALTSTGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALS 681
Query: 338 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI-HPTIVNFGENVKALQVSCGFNH 395
+ ++ W G++S GQ G GN I P V+ + + Q+S G +H
Sbjct: 682 HDNEVYAW------------GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSH 729
Query: 396 TGA 398
+ A
Sbjct: 730 SLA 732
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 3672 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 3729
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 3730 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 3780
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 3781 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 3810
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 3811 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 3859
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P ++ + +V+CG + AL
Sbjct: 3860 LGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 3895
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 73/153 (47%), Gaps = 4/153 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ P KV L GI +Q + G S+A T
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase, partial [Rhipicephalus pulchellus]
Length = 1181
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 164/366 (44%), Gaps = 65/366 (17%)
Query: 43 WGNGDYGRLGL-------GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
WG G G LGL + +P F +++ +ACG HTL L G VY+
Sbjct: 56 WGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSVYSC 115
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G NDFGQLG ++ LE +++ L E+ ++ G HS A++ G+++ WG N NGQ
Sbjct: 116 GANDFGQLGQDRSM-RKLE--QVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQ 172
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + + P ++ L+ + Q A G +A+ G++ SWG SG+LG G++
Sbjct: 173 LGCGTEEESRLR-PKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRD 231
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + +E PR + L GV + + A G +HS + +G V++
Sbjct: 232 S-------TGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFV------------- 271
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 333
WG N G LG+ D LH V P + V CG HT
Sbjct: 272 -----------------WGRNSCGQLGLSDQRDRLHP--TVLKPLRSQRIKHVCCGENHT 312
Query: 334 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
AA++ +G + T+G G + GQLGHG V+ P V Q+SCG
Sbjct: 313 AALTADGGVFTFGAG------------TYGQLGHGVKVNEAVPRRVVELMGTAISQLSCG 360
Query: 393 FNHTGA 398
HT A
Sbjct: 361 RCHTVA 366
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 140/318 (44%), Gaps = 65/318 (20%)
Query: 92 VYATGLNDFGQLGISE-NIGYSLE-----PLRISGL-KKEVVQISTGYHHSSAITVDGEL 144
+Y+ GL G+LG+++ G E P R+ + V +++ G+ H+ + +G +
Sbjct: 53 LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 112
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
Y G N GQLG + K+ +V LS + A G S+A++ G+V SWG
Sbjct: 113 YSCGANDFGQLGQDRSMRKL----EQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCN 168
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
+G+LG G E S P++IK+L + + A G +H C+
Sbjct: 169 RNGQLGCGTEEE--------SRLRPKVIKKLATLHIVQIACGAVH--CL----------- 207
Query: 265 RAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG--SIDVLHSPERVQGPFSESP 322
+L + GEL++WG N +G LG+G S P RV P
Sbjct: 208 -----------------ALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSH-LVGVP 249
Query: 323 VDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
+ V+CG H+ ++ G + WG +S GQLG + D +HPT++
Sbjct: 250 LALVACGAMHSVGLTPSGTVFVWG------------RNSCGQLGLSDQRDRLHPTVLKPL 297
Query: 382 ENVKALQVSCGFNHTGAL 399
+ + V CG NHT AL
Sbjct: 298 RSQRIKHVCCGENHTAAL 315
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGL R P V +K + CG HT LT G V+ G +G
Sbjct: 271 VWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYG 330
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
QLG + ++ + + + Q+S G H+ A G LY++G +GQLG G
Sbjct: 331 QLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTL 390
Query: 161 AAKVIPI 167
+ +P+
Sbjct: 391 ESSALPV 397
>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
Length = 2441
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 159/319 (49%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 1632 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 1691
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 1692 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 1750
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 1751 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 1803
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 1804 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 1859
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R +L S G++Y WGSN G LG+G + + P V G
Sbjct: 1860 NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 1919
Query: 317 PFSESPVDQVSCGWKHTAA 335
V Q+S G H+AA
Sbjct: 1920 -LQGKNVRQISAGRCHSAA 1937
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 129/246 (52%), Gaps = 14/246 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 1686 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 1745
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 1746 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 1804
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 1805 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 1854
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 1855 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 1913
Query: 281 PSLISG 286
P+L++G
Sbjct: 1914 PTLVTG 1919
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 1611 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 1668
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 1669 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 1719
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 1720 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 1749
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 1750 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 1798
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P ++ + +V+CG + AL
Sbjct: 1799 LGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 1834
>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase [Rhipicephalus pulchellus]
Length = 1175
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 164/366 (44%), Gaps = 65/366 (17%)
Query: 43 WGNGDYGRLGL-------GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
WG G G LGL + +P F +++ +ACG HTL L G VY+
Sbjct: 50 WGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSVYSC 109
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G NDFGQLG ++ LE +++ L E+ ++ G HS A++ G+++ WG N NGQ
Sbjct: 110 GANDFGQLGQDRSM-RKLE--QVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQ 166
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + + P ++ L+ + Q A G +A+ G++ SWG SG+LG G++
Sbjct: 167 LGCGTEEESRLR-PKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRD 225
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + +E PR + L GV + + A G +HS + +G V++
Sbjct: 226 S-------TGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFV------------- 265
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 333
WG N G LG+ D LH V P + V CG HT
Sbjct: 266 -----------------WGRNSCGQLGLSDQRDRLHP--TVLKPLRSQRIKHVCCGENHT 306
Query: 334 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
AA++ +G + T+G G + GQLGHG V+ P V Q+SCG
Sbjct: 307 AALTADGGVFTFGAG------------TYGQLGHGVKVNEAVPRRVVELMGTAISQLSCG 354
Query: 393 FNHTGA 398
HT A
Sbjct: 355 RCHTVA 360
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 140/318 (44%), Gaps = 65/318 (20%)
Query: 92 VYATGLNDFGQLGISE-NIGYSLE-----PLRISGL-KKEVVQISTGYHHSSAITVDGEL 144
+Y+ GL G+LG+++ G E P R+ + V +++ G+ H+ + +G +
Sbjct: 47 LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 106
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
Y G N GQLG + K+ +V LS + A G S+A++ G+V SWG
Sbjct: 107 YSCGANDFGQLGQDRSMRKL----EQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCN 162
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
+G+LG G E S P++IK+L + + A G +H C+
Sbjct: 163 RNGQLGCGTEEE--------SRLRPKVIKKLATLHIVQIACGAVH--CL----------- 201
Query: 265 RAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG--SIDVLHSPERVQGPFSESP 322
+L + GEL++WG N +G LG+G S P RV P
Sbjct: 202 -----------------ALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSH-LVGVP 243
Query: 323 VDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
+ V+CG H+ ++ G + WG +S GQLG + D +HPT++
Sbjct: 244 LALVACGAMHSVGLTPSGTVFVWG------------RNSCGQLGLSDQRDRLHPTVLKPL 291
Query: 382 ENVKALQVSCGFNHTGAL 399
+ + V CG NHT AL
Sbjct: 292 RSQRIKHVCCGENHTAAL 309
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGL R P V +K + CG HT LT G V+ G +G
Sbjct: 265 VWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYG 324
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
QLG + ++ + + + Q+S G H+ A G LY++G +GQLG G
Sbjct: 325 QLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTL 384
Query: 161 AAKVIPI 167
+ +P+
Sbjct: 385 ESSALPV 391
>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
terrestris]
Length = 1104
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 172/373 (46%), Gaps = 52/373 (13%)
Query: 33 STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSA-FEKHS-LKALACGGAHTLFLTETG 90
S L++ WGN +G LGLG +E V C F+K S ++ +ACG +T+ +T G
Sbjct: 42 SLLKKEDMFCWGNTRHGELGLGGIEDEIILVPCEVDFKKASEIQQIACGENYTVVITHDG 101
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGK 149
+Y+ G ND+GQLG + G L I GL V + + G +H+ A+ G+L+ WG
Sbjct: 102 KIYSCGNNDYGQLGHEQ--GRKRLQL-ILGLDAFVFKKAACGAYHTIAVNEWGQLFSWGS 158
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
NS GQLGL K P V+ L Q A G + ++A+T G++ SWG+ G+L
Sbjct: 159 NSEGQLGLNSKNFMECS-PRMVKTLGTSIIVQIACGMKHALALTNNGELYSWGSNSEGQL 217
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
G G + E P+LI L GV + A G HS I ++G ++ +G +
Sbjct: 218 GLGVDIR--------CEMKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQ 269
Query: 270 MLFQEGNHARRPS----------------------LISGGELYTWGSNENGCLGIGSIDV 307
+ + + P L G ++T G+ G LG GS +
Sbjct: 270 LGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNN 329
Query: 308 LHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLG 365
P +V S V Q+SCG +HT A+ S+G++ WG GG+ GQLG
Sbjct: 330 EILPRQVMELMG-STVTQISCGKRHTLALVPSQGRVYAWGLGGA------------GQLG 376
Query: 366 HGNDVDYIHPTIV 378
+ + P +V
Sbjct: 377 NNSTRSTTTPQVV 389
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 113/259 (43%), Gaps = 55/259 (21%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+++ WG +G+LGLG ++I +P +V+ +Q A G +V +T GK+ S G
Sbjct: 48 DMFCWGNTRHGELGLGGIEDEIILVPCEVDFKKASEIQQIACGENYTVVITHDGKIYSCG 107
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G+LGH Q L +LI L+ K AA G H+ ++E
Sbjct: 108 NNDYGQLGHEQGRKRL-----------QLILGLDAFVFKKAACGAYHTIAVNE------- 149
Query: 263 GDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
G+L++WGSN G LG+ S + + R+ S
Sbjct: 150 -----------------------WGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSI 186
Query: 323 VDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD-YIHPTIVNF 380
+ Q++CG KH A++ G++ +W G +S GQLG G D+ + P ++N
Sbjct: 187 IVQIACGMKHALALTNNGELYSW------------GSNSEGQLGLGVDIRCEMKPKLINT 234
Query: 381 GENVKALQVSCGFNHTGAL 399
V ++CG H+ A+
Sbjct: 235 LAGVPIAFIACGGYHSIAI 253
>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
Length = 4862
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 159/319 (49%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4112 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R +L S G++Y WGSN G LG+G + + P V G
Sbjct: 4280 NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4339
Query: 317 PFSESPVDQVSCGWKHTAA 335
+ Q+S G H+AA
Sbjct: 4340 -LQGKNIRQISAGRCHSAA 4357
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 129/246 (52%), Gaps = 14/246 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L G+ ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLISG 286
P+L++G
Sbjct: 4334 PTLVTG 4339
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4088
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4139
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4140 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4169
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4170 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4218
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P ++ + +V+CG + AL
Sbjct: 4219 LGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4254
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
[Callithrix jacchus]
gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
[Callithrix jacchus]
Length = 4860
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 159/319 (49%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4111 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4169
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4170 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4222
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4223 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4278
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R +L S G++Y WGSN G LG+G + + P V G
Sbjct: 4279 NRPQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4338
Query: 317 PFSESPVDQVSCGWKHTAA 335
V Q+S G H+AA
Sbjct: 4339 -LQGKNVRQISAGRCHSAA 4356
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 129/246 (52%), Gaps = 14/246 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4164
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4165 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4223
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4224 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4273
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ + L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4274 -RARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4332
Query: 281 PSLISG 286
P+L++G
Sbjct: 4333 PTLVTG 4338
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4087
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4088 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4138
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4139 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4168
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4169 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4217
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4218 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4253
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
Length = 4862
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 159/319 (49%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4112 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R +L S G++Y WGSN G LG+G + + P V G
Sbjct: 4280 NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4339
Query: 317 PFSESPVDQVSCGWKHTAA 335
+ Q+S G H+AA
Sbjct: 4340 -LQGKNIRQISAGRCHSAA 4357
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 129/246 (52%), Gaps = 14/246 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L G+ ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLISG 286
P+L++G
Sbjct: 4334 PTLVTG 4339
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4088
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4139
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4140 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4169
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4170 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4218
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P ++ + +V+CG + AL
Sbjct: 4219 LGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4254
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|281202576|gb|EFA76778.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 2305
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 177/384 (46%), Gaps = 53/384 (13%)
Query: 43 WGNGDYGRLGLGSLE--SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+G Y +LG S+E S+ P F + +++CG ++ LTE G VY G
Sbjct: 547 WGSGSYCKLGFKSVEKDSQPTPERLPNFNISDICSISCGSYYSAALTENGDVYMWGRGSV 606
Query: 101 GQLGISE----NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
I+ L P ++ L+ E+V IS G++HS+A+ +GEL WG +GQLG
Sbjct: 607 KNPPIATLGNGTFDDQLLPQKVESLQ-EIVVISIGFYHSAAVKSNGELLTWGCGEDGQLG 665
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + PIP V+ ++ + Q G + ++ +T GKV +WG G+LG G
Sbjct: 666 HGDVFNQ--PIPKVVQSITSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGD--- 720
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD-------- 268
+ TP L+ L+ + A G H+A + N V +FG+ A
Sbjct: 721 ------TQKNCTPMLVTSLDKYHIIQIACGATHNAVLTNNREVLVFGNGAAMGSANIISI 774
Query: 269 -------KMLFQEG---NHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
K++ E H +L G++YTWGS + G G+ + P+ V+
Sbjct: 775 PIMVPSLKIMNIERLSCGHYSTAALTECGDVYTWGSGQELGHGHGTSEA--HPKLVETLR 832
Query: 319 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 377
++S + Q+SCG +H A +++ GKI T G F + GH++G Q +D + T
Sbjct: 833 NQS-IRQISCGGRHMAFLTDSGKIYTSG----KDPFGQLGHAAGDQ-NRPKKIDSLLKTT 886
Query: 378 VNFGENVKALQVSCGFNHTGALLE 401
+ +SCG NH AL +
Sbjct: 887 F--------MSISCGENHNAALFD 902
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 108/253 (42%), Gaps = 48/253 (18%)
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
L+ + + +++L + + +++WG+G +LG + S+ TP +
Sbjct: 520 LNAVNSAESSLSMRSATQLDTSRGLMTWGSGSYCKLGFKS-------VEKDSQPTPERLP 572
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV--------------DKMLFQEGNHAR 279
+ + G +SA + ENG VY++G +V D++L Q+ +
Sbjct: 573 NFNISDICSISCGSYYSAALTENGDVYMWGRGSVKNPPIATLGNGTFDDQLLPQKVESLQ 632
Query: 280 RPSLI-----------SGGELYTWGSNENGCLGIGSIDVLHSP-ERVQGPFSESPVDQVS 327
+I S GEL TWG E+G LG G DV + P +V + V QV
Sbjct: 633 EIVVISIGFYHSAAVKSNGELLTWGCGEDGQLGHG--DVFNQPIPKVVQSITSHWVTQVQ 690
Query: 328 CGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG KHT +++ GK+ TWG S GQLG G+ P +V +
Sbjct: 691 CGEKHTICLTKNGKVFTWGT------------SEYGQLGLGDTQKNCTPMLVTSLDKYHI 738
Query: 387 LQVSCGFNHTGAL 399
+Q++CG H L
Sbjct: 739 IQIACGATHNAVL 751
>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan paniscus]
Length = 4798
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 158/319 (49%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 3989 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4048
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4049 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4107
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G V ++G G G+LG G
Sbjct: 4108 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGN----- 4160
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4161 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4216
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R +L S G++Y WGSN G LG+G + + P V G
Sbjct: 4217 NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4276
Query: 317 PFSESPVDQVSCGWKHTAA 335
V Q+S G H+AA
Sbjct: 4277 -LQGKNVRQISAGRCHSAA 4294
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 130/246 (52%), Gaps = 14/246 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4043 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4102
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++VDG + + +G G+LGLG
Sbjct: 4103 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNS 4161
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4162 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4211
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4212 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4270
Query: 281 PSLISG 286
P+L++G
Sbjct: 4271 PTLVTG 4276
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 3968 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4025
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4026 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4076
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4077 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4106
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4107 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSVDGSMVWAFG--------DGDY--GK 4155
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P ++ + +V+CG + AL
Sbjct: 4156 LGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4191
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4854
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 158/319 (49%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4045 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4104
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4105 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4163
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G V ++G G G+LG G
Sbjct: 4164 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGN----- 4216
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4217 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4272
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R +L S G++Y WGSN G LG+G + + P V G
Sbjct: 4273 NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4332
Query: 317 PFSESPVDQVSCGWKHTAA 335
V Q+S G H+AA
Sbjct: 4333 -LQGKNVRQISAGRCHSAA 4350
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 130/246 (52%), Gaps = 14/246 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4099 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4158
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++VDG + + +G G+LGLG
Sbjct: 4159 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNS 4217
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4218 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4267
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4268 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4326
Query: 281 PSLISG 286
P+L++G
Sbjct: 4327 PTLVTG 4332
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 119/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4024 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4081
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4082 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4132
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + S G+L+T+G+ + G LG+G
Sbjct: 4133 SCGFKHSAVV------------------------------TSDGKLFTFGNGDYGRLGLG 4162
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4163 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSVDGSMVWAFG--------DGDY--GK 4211
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P ++ + +V+CG + AL
Sbjct: 4212 LGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4247
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1 [Pan
troglodytes]
gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4861
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 158/319 (49%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4112 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G V ++G G G+LG G
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGN----- 4223
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R +L S G++Y WGSN G LG+G + + P V G
Sbjct: 4280 NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4339
Query: 317 PFSESPVDQVSCGWKHTAA 335
V Q+S G H+AA
Sbjct: 4340 -LQGKNVRQISAGRCHSAA 4357
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 130/246 (52%), Gaps = 14/246 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++VDG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLISG 286
P+L++G
Sbjct: 4334 PTLVTG 4339
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4088
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4139
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4140 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4169
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4170 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSVDGSMVWAFG--------DGDY--GK 4218
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P ++ + +V+CG + AL
Sbjct: 4219 LGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4254
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|356501930|ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 388
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 172/386 (44%), Gaps = 52/386 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG L+ P + F S+ +LACGGAH + LT G + G + GQ
Sbjct: 23 WGAGTEGQLGTKILQDEHFPQLLHQFSLSSISSLACGGAHVIALTSAGKALSWGRGNSGQ 82
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG E + +L P ++ L + +S G+ HS ++ G ++ G S GQLG G A
Sbjct: 83 LGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTCGDGSFGQLGHGDNA 142
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ KV C + Q A G S+ + G +V +G+G G+LG +
Sbjct: 143 SHCSPV--KVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSND------- 193
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------DRAVDKMLFQE 274
R S P+++ EGV++ AA HSA + +G VY +G D V + L
Sbjct: 194 RVKSVNVPKVVSGFEGVEIVGTAANGDHSAAVSVDGHVYTWGRGFKGFEDAHVPQCLNSS 253
Query: 275 GNHARRP-------SLISGGELYTWGSNENGCL----GIGSIDVLHSPERVQGPFSESP- 322
N + ++ GE+Y G N G L IG H P+ + + P
Sbjct: 254 LNFTKVALGWNHALAMSGEGEVYMLGGNHLGVLSDLQNIGPAK--HFPDLREFNLEKVPG 311
Query: 323 -----VDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 376
+ ++ G +H+ ++E G+I TWGWG GQLG G+ D P
Sbjct: 312 LDGTKITDIAAGAEHSVIVTEHGEIKTWGWG------------EHGQLGLGDTRDQTSPV 359
Query: 377 IVNFGENVK---ALQVSCGFNHTGAL 399
V+ ++ +++V CG T A+
Sbjct: 360 TVSLDYDLNEAASIRVFCGSGFTFAV 385
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 132/304 (43%), Gaps = 46/304 (15%)
Query: 39 FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
F G+G +G+LG G S PV S F + +ACG H+L L + VY G
Sbjct: 124 FVFTCGDGSFGQLGHGDNASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSG 183
Query: 99 DFGQLGISENIGYSLE-PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQLG+S + S+ P +SG + E+V + HS+A++VDG +Y WG+
Sbjct: 184 KRGQLGVSNDRVKSVNVPKVVSGFEGVEIVGTAANGDHSAAVSVDGHVYTWGR------- 236
Query: 157 LGKKAAKVIPIPTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G K + +P +CL S + + ALG+ ++A++G G+V G G L Q
Sbjct: 237 -GFKGFEDAHVP---QCLNSSLNFTKVALGWNHALAMSGEGEVYMLGGNHLGVLSDLQNI 292
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
E+ + L+G K+ AAG HS + E+
Sbjct: 293 GPAKHFPDLREFNLEKVPGLDGTKITDIAAGAEHSVIVTEH------------------- 333
Query: 276 NHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF--SESPVDQVSCGWKHT 333
GE+ TWG E+G LG+G SP V + +E+ +V CG T
Sbjct: 334 -----------GEIKTWGWGEHGQLGLGDTRDQTSPVTVSLDYDLNEAASIRVFCGSGFT 382
Query: 334 AAIS 337
A++
Sbjct: 383 FAVT 386
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 103/229 (44%), Gaps = 36/229 (15%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++ WG + GQLG + P LS I A G +A+T GK LSWG
Sbjct: 20 VWSWGAGTEGQLGTKILQDEHFPQLLHQFSLSSI--SSLACGGAHVIALTSAGKALSWGR 77
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G SG+LGHG+ + S + Y P+ + L+G + +AG+ HS + + G V+ G
Sbjct: 78 GNSGQLGHGE-------VVSNTLY-PKAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTCG 129
Query: 264 DRA---------------------VDKMLFQEGNHARRP-SLISGGELYTWGSNENGCLG 301
D + VD + Q R L+ G ++Y +GS + G LG
Sbjct: 130 DGSFGQLGHGDNASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSGKRGQLG 189
Query: 302 IGS--IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 347
+ + + ++ P+ V G F + + H+AA+S +G + TWG G
Sbjct: 190 VSNDRVKSVNVPKVVSG-FEGVEIVGTAANGDHSAAVSVDGHVYTWGRG 237
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 87/211 (41%), Gaps = 62/211 (29%)
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+V SWGAG G+LG + IL E+ P+L+ + + A G H
Sbjct: 19 RVWSWGAGTEGQLG----TKIL-----QDEHFPQLLHQFSLSSISSLACGGAHVI----- 64
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSI--DVLHSPERV 314
+L S G+ +WG +G LG G + + L+ P+ V
Sbjct: 65 -------------------------ALTSAGKALSWGRGNSGQLGHGEVVSNTLY-PKAV 98
Query: 315 ---QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
G F + VS GW H+ +S+ G + T G G S GQLGHG++
Sbjct: 99 TSLDGYF----ITHVSAGWSHSGFVSDTGFVFTCGDG------------SFGQLGHGDNA 142
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ P V+ ++ QV+CG H+ LL+
Sbjct: 143 SHCSPVKVSCFVDLHVAQVACGMRHSLVLLK 173
>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Cricetulus griseus]
Length = 631
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 165/365 (45%), Gaps = 65/365 (17%)
Query: 43 WGNGDYGRLGLGSLESRWR-----PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
WG Y LG + S R P VC S+K +ACGG H++FL E G VY G+
Sbjct: 4 WG---YWSLGQPGISSNLRGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60
Query: 98 NDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
N GQLG E G +P +I L + +V ++ G HS A++ G+L+ WG S+GQLG
Sbjct: 61 NSKGQLG-HEREGN--KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG 117
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
L + +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 118 L-MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP 176
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S+ +P+ ++ LEG+ + AAG HS + +G V
Sbjct: 177 --------SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAV----------------- 211
Query: 277 HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 336
+ WG N G LG+ SP V+ V +SCG +HTA +
Sbjct: 212 -------------FGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVL 257
Query: 337 SE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
++ G + T+G G S GQLGHG+ D ++P V + Q++CG H
Sbjct: 258 TKSGGVFTFGAG------------SCGQLGHGSMNDEVNPRRVLELMGSEVTQIACGRQH 305
Query: 396 TGALL 400
T A +
Sbjct: 306 TLAFV 310
>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
niloticus]
Length = 4936
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 159/320 (49%), Gaps = 42/320 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4127 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4186
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4187 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 4245
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P KV L G Q A G ++ V+ G ++ ++G G G+LG G
Sbjct: 4246 TSNK--KLPEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGN----- 4298
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G+V+ FG DR + + NH
Sbjct: 4299 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGKVFTFGQDRLIGLPEGRARNH 4354
Query: 278 ARRPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQ 315
RP + G G++YTWGSN G LG+G + + P V
Sbjct: 4355 -NRPQQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGLGHTNHVREPTLVT 4413
Query: 316 GPFSESPVDQVSCGWKHTAA 335
+ Q+S G H+AA
Sbjct: 4414 T-LQGKNIHQISAGRCHSAA 4432
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 126/245 (51%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4181 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 4240
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P +++ L+ V Q++ G +H+ ++ DG + + +G G+LGLG
Sbjct: 4241 LGLGNTSNKKL-PEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNS 4299
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T GKV ++G L G
Sbjct: 4300 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGKVFTFGQDRLIGLPEG-------- 4349
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ + L G+ ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4350 -RARNHNRPQQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGLGHTNHVRE 4408
Query: 281 PSLIS 285
P+L++
Sbjct: 4409 PTLVT 4413
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H ++K ++ HTL T G V++ G D
Sbjct: 435 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 493
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A++ DGELY WG+ G+LG G
Sbjct: 494 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHG 553
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 554 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 609
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++++ L+G+ ++ AG S + G+VY +G A E
Sbjct: 610 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 659
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 660 ALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 719
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 720 IG-LDGVAIQQISAGTSHSLAWTALPRDRQVVAW 752
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 138/322 (42%), Gaps = 60/322 (18%)
Query: 82 HTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
T ++ET VY G N QL G E I L+P +++ + I G + + I+
Sbjct: 371 ETPVVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLASSFADAQTIEAGQYCTFVIS 426
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKV 198
DG + GK S G+LGLG + E I ++ G + ++A T G+V
Sbjct: 427 SDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEV 486
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENG 257
SWG G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 487 FSWGDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVSEDG 537
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
ELYTWG + G LG G + + P V+
Sbjct: 538 ------------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK-- 565
Query: 318 FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 377
S V +VSCG HT A+S+ W +GG G+LGHG+ P +
Sbjct: 566 -DISNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKV 614
Query: 378 VNFGENVKALQVSCGFNHTGAL 399
V + + +V G + AL
Sbjct: 615 VEALQGMFIRKVCAGSQSSLAL 636
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ ++E G +Y G DFG
Sbjct: 489 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFG 548
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 549 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 605
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P VE L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 606 -TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 660
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL +V + G H + + VY +G+ ++
Sbjct: 661 LR------PKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSM 701
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4106 QVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4163
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4164 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4214
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4215 SCGFKHSAVVTADGKLFTFGN----------GDYGR--------------------LGLG 4244
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PE+V V QV+CG HT +S ++ W +G DG G+
Sbjct: 4245 NTSNKKLPEKVTA-LEGYHVGQVACGLNHTLVVSADGMMVWAFG--------DGDY--GK 4293
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4294 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4329
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 593 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 650
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L VV IS G H A++ D E+Y WG NS GQ G G
Sbjct: 651 LGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 710
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L G+ +Q + G S+A T +V++W
Sbjct: 711 GPITK-PKKVIGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 752
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 542 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 599
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P + L+ + ++ G S A+T G++Y WG LG G
Sbjct: 600 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 656
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 657 EATAL-RPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 708
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+GV ++ +AG HS
Sbjct: 709 --STGPITKPKKVIGLDGVAIQQISAGTSHS 737
>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 679
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 163/362 (45%), Gaps = 56/362 (15%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G LGLG +E P + +++ ACGG+HTL LT+ G +Y G ND
Sbjct: 6 WGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDH 65
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG N + P IS L+ +V Q+S G HS A+T G+L+ WG N+ GQLG
Sbjct: 66 GQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDL 125
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P P ++ ++ Q + G +A+T G++ +WGA G+LG G +
Sbjct: 126 DMVSY-PAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVP 184
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
T L+K L G+ + A G HS + ++G IFG
Sbjct: 185 --------TATLVKSLAGIPIAFIACGGNHSFAVSKSGA--IFG---------------- 218
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
WG N G LG+ +D P +++ S V +SCG + ++ E
Sbjct: 219 ------------WGKNTFGQLGLNDLDSRCYPTQLKTLRSLG-VRYISCGDDFSVFLTQE 265
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T G GTF GQLGHG + I P +V K Q++CG HT A
Sbjct: 266 GGVFTCGL----GTF--------GQLGHGTHGNEILPRMVFELMGSKITQIACGRKHTLA 313
Query: 399 LL 400
+
Sbjct: 314 FV 315
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 134/309 (43%), Gaps = 49/309 (15%)
Query: 44 GNGDYGRLG--LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
GN D+G+LG +L ++ RP SA E + + ++CG +H+L LT G +++ G N G
Sbjct: 61 GNNDHGQLGHDTNNLPNK-RPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATG 119
Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG ++ P I + K VVQIS G+ H A+T GEL+ WG N GQLGLG
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTT 179
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS---- 216
KV P T V+ L+GI A G S AV+ G + WG G+LG S
Sbjct: 180 GKKV-PTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYP 238
Query: 217 -ILGFLRST--------------------------------------SEYTPRLIKELEG 237
L LRS +E PR++ EL G
Sbjct: 239 TQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRMVFELMG 298
Query: 238 VKVKIAAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNE 296
K+ A G H+ A + G+VY FG V ++ P ++ G + W
Sbjct: 299 SKITQIACGRKHTLAFVPSRGKVYGFGLGGVGQLGVGSSVSFNTPQIVRGPWVSNWIDAA 358
Query: 297 NGCLGIGSI 305
L +G I
Sbjct: 359 QSTLIVGKI 367
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 116/274 (42%), Gaps = 46/274 (16%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
LY WG +G+LGLG + + P +++ +QAA G ++ +T GK+ + G
Sbjct: 3 LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH + P+ I LE V + G HS + G+++ +G
Sbjct: 63 NDHGQLGHDT--------NNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWG 114
Query: 264 DRAV----------------------DKMLFQ-EGNHARRPSLISGGELYTWGSNENGCL 300
A K + Q H+ +L + GEL+ WG+NE G L
Sbjct: 115 SNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQL 174
Query: 301 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHS 359
G+G+ + + P+ ++CG H+ A+S+ G I WG TF
Sbjct: 175 GLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWG----KNTF------ 224
Query: 360 SGGQLGHGNDVD-YIHPTIVNFGENVKALQVSCG 392
GQLG ND+D +PT + ++ +SCG
Sbjct: 225 --GQLGL-NDLDSRCYPTQLKTLRSLGVRYISCG 255
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL L+SR P ++ ++CG ++FLT+ G V+ GL FGQ
Sbjct: 219 WGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQ 278
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA-ITVDGELY 145
LG + L + + ++ QI+ G H+ A + G++Y
Sbjct: 279 LGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 23/121 (19%)
Query: 289 LYTWGSNENGCLGIGSIDVLHSPERVQGP----FSESP-VDQVSCGWKHTAAIS-EGKIL 342
LY WGS +G LG+G I+ E+V P +S++ V Q +CG HT ++ +GK+
Sbjct: 3 LYCWGSTVHGELGLGGIE----EEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLY 58
Query: 343 TWGWGGSHGTFSEDGHSSGGQLGHG-NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
T G++ GQLGH N++ P ++ EN QVSCG +H+ AL
Sbjct: 59 TC------------GNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTN 106
Query: 402 Y 402
+
Sbjct: 107 W 107
>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
Length = 1056
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 115/364 (31%), Positives = 166/364 (45%), Gaps = 60/364 (16%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLND 99
WG G+LG+G E + P + E S ++ ++CG HT FL + G VY G N+
Sbjct: 4 WGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCGSNE 63
Query: 100 FGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
FGQLG ++ P + ++ + +++ G H+ A++ G ++ WG NS GQ+GLG
Sbjct: 64 FGQLGQEKS---HTNPESVHAIETFTITKVTCGKAHTVAVSDQGLVFAWGDNSYGQIGLG 120
Query: 159 KKAA-KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
K KV IP ++ L+ + Q A G S+A+T G + WG SG+LG G+ S
Sbjct: 121 SKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGKTHS- 179
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S SE P L L GV + +AG HS
Sbjct: 180 -----SMSEPAPVL--SLNGVPFMLISAGGAHSF-------------------------- 206
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 336
+L S G L+ WG NE G LG+ P ++ S+ V VSCG KHTA +
Sbjct: 207 ----ALSSSGALFGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQG-VCYVSCGEKHTAVLT 261
Query: 337 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
S+G + T+G G S GQLGH ++ P V Q++CG HT
Sbjct: 262 SDGGVFTFGCGTS------------GQLGHNSNHHEYTPRKVFELMGSVVTQIACGRAHT 309
Query: 397 GALL 400
AL+
Sbjct: 310 LALV 313
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 143/304 (47%), Gaps = 38/304 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ ++G+LG +S P A E ++ + CG AHT+ +++ G V+A G N +GQ+
Sbjct: 60 GSNEFGQLG--QEKSHTNPESVHAIETFTITKVTCGKAHTVAVSDQGLVFAWGDNSYGQI 117
Query: 104 GISENIGYSLE--PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+ + ++ P + GL K VVQI+ G +HS A+T+ G L+ WG NS+GQLG+GK
Sbjct: 118 GLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGKT 177
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ + P V L+G+ + G S A++ G + WG G+LG
Sbjct: 178 HSSMSE-PAPVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYGQLGVHD------- 229
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T P L+K L V + G H+A + +G V+ FG ++ +H
Sbjct: 230 --TTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNSNHHEYT 287
Query: 281 PSLI-----------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
P + S G +YT+G +G LG+G + +SP +GP
Sbjct: 288 PRKVFELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGDGQLGLGVTNNCNSPMTAKGP 347
Query: 318 FSES 321
+ S
Sbjct: 348 WLRS 351
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 86/172 (50%), Gaps = 4/172 (2%)
Query: 43 WGNGDYGRLGLGSLESRW-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ G+LG+G S P + ++ GGAH+ L+ +G ++ G N++G
Sbjct: 164 WGDNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYG 223
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+ + L L S + V +S G H++ +T DG ++ +G ++GQLG
Sbjct: 224 QLGVHDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNSNH 283
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
+ P KV L G Q A G ++A V G+V ++G GG G+LG G
Sbjct: 284 HEY--TPRKVFELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGDGQLGLG 333
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 15/113 (13%)
Query: 289 LYTWGSNENGCLGIGSI--DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
++ WG G LG+G + + +P ++ S V +VSCGW HTA + +
Sbjct: 1 MFCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKD------- 53
Query: 347 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
GT G + GQLG + + +P V+ E +V+CG HT A+
Sbjct: 54 ----GTVYTCGSNEFGQLGQ--EKSHTNPESVHAIETFTITKVTCGKAHTVAV 100
>gi|145357939|ref|NP_568268.3| Regulator of chromosome condensation-like protein with FYVE zinc
finger domain-containing protein [Arabidopsis thaliana]
gi|332004415|gb|AED91798.1| Regulator of chromosome condensation-like protein with FYVE zinc
finger domain-containing protein [Arabidopsis thaliana]
Length = 1075
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 169/372 (45%), Gaps = 70/372 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GRLG G + +P + A +++ +ACG H+ +T +G +Y G DFG
Sbjct: 332 WGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGV 391
Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P R++ L + V I+ G +H++ +T G+L+ +G + G LG G K
Sbjct: 392 LGHGNEVSHWV-PKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDK 450
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGSGR 208
K + IP +V+ L G+ T +AA G + AV GK+ +WG G GR
Sbjct: 451 --KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGR 508
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + P+L+ V+ F AC
Sbjct: 509 LGHGNKE-------------PKLVPTCVAALVE---PNFCQVAC---------------- 536
Query: 269 KMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 328
H+ +L + G +YT GS G LG D +P RV+G +S V++++C
Sbjct: 537 -------GHSLTVALTTSGHVYTMGSPVYGQLGNSHADG-KTPNRVEGKLHKSFVEEIAC 588
Query: 329 GWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 387
G H A + S ++ TWG G S G+LGHG+ D PT+V ++ +
Sbjct: 589 GAYHVAVLTSRTEVYTWGKG------------SNGRLGHGDVDDRNSPTLVESLKDKQVK 636
Query: 388 QVSCGFNHTGAL 399
++CG N T A+
Sbjct: 637 SIACGTNFTAAV 648
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 84/164 (51%), Gaps = 10/164 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G+ E + P +A + + +ACG + T+ LT +G VY G +GQ
Sbjct: 501 WGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 560
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG S G + P R+ G K V +I+ G +H + +T E+Y WGK SNG+LG G
Sbjct: 561 LGNSHADGKT--PNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDV 618
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ PT VE L K A G + AV + W +G
Sbjct: 619 DDRN--SPTLVESLKDKQVKSIACGTNFTAAVC----IHRWASG 656
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 104/239 (43%), Gaps = 54/239 (22%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G + +V VT G+ SWG GRLGHG +S+I
Sbjct: 298 LPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNI--------- 348
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
P+LI L +++ A G HS +
Sbjct: 349 QQPKLIDALNTTNIELVACGEFHSCAV------------------------------TLS 378
Query: 287 GELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTW 344
G+LYTWG + G LG G+ +V H P+RV V ++CG HTA + S G++ T+
Sbjct: 379 GDLYTWGKGDFGVLGHGN-EVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTF 437
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
G GTF G LGHG+ P V+ + ++ ++ +CG HT A++E +
Sbjct: 438 G----DGTF--------GVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVM 484
>gi|452818724|gb|EME25942.1| regulator of chromosome condensation [Galdieria sulphuraria]
Length = 383
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 180/380 (47%), Gaps = 56/380 (14%)
Query: 58 SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLE 114
S +RP + ++ + S++ +ACG TLF+T+ G VY++G+ +GQLG + E G +L
Sbjct: 19 SVYRPKIVASLQNKSIRDVACGQGFTLFVTQQGQVYSSGVGRYGQLGLGSLKEVEGITL- 77
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
I + ++V+ + G HS +T G LY G G+LGLG ++ + P VE L
Sbjct: 78 ---IDSIPEKVITCAAGDRHSLFVTEQGHLYSCGYGKRGELGLG-TISRRMETPQLVESL 133
Query: 175 SGIFTK--QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL------RSTSE 226
+ K + A G S+A++ GKV S+G+ G LGHG+ + FL E
Sbjct: 134 AREEEKIIKVAAGHGFSIALSESGKVYSFGSANDGHLGHGEVPGGI-FLWEPFHSHRNME 192
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---------DRAVDKMLFQEGNH 277
+PRLI+ LE +++ + G H+ I++ G + +G D V+ Q H
Sbjct: 193 TSPRLIRALEKEQMEYISCGSGHAFAINKEGVAFGWGCGRYHCFATDNEVNWEQPQALFH 252
Query: 278 ARRP------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF---SESP 322
P L GG+++ WG N GCLG+G R+ ++ P
Sbjct: 253 LPGPWKQIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVGEQRTSPGEPRIVEKLLQQAKEP 312
Query: 323 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF- 380
+ ++ GW + A+ SEG + +WG GH+ G LG G + D P +
Sbjct: 313 IQWIAAGWFFSMAVDSEGYVYSWG----------RGHA--GALGTGEEEDKWEPVAIQNE 360
Query: 381 -GENVKALQVSCGFNHTGAL 399
GE ++ ++ GFN+ A+
Sbjct: 361 QGEPLQVDRIYAGFNYAIAV 380
>gi|14586365|emb|CAC42896.1| putative protein [Arabidopsis thaliana]
Length = 1062
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 169/372 (45%), Gaps = 70/372 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GRLG G + +P + A +++ +ACG H+ +T +G +Y G DFG
Sbjct: 319 WGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGV 378
Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P R++ L + V I+ G +H++ +T G+L+ +G + G LG G K
Sbjct: 379 LGHGNEVSHWV-PKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDK 437
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGSGR 208
K + IP +V+ L G+ T +AA G + AV GK+ +WG G GR
Sbjct: 438 --KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGR 495
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + P+L+ V+ F AC
Sbjct: 496 LGHGNKE-------------PKLVPTCVAALVE---PNFCQVAC---------------- 523
Query: 269 KMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 328
H+ +L + G +YT GS G LG D +P RV+G +S V++++C
Sbjct: 524 -------GHSLTVALTTSGHVYTMGSPVYGQLGNSHADG-KTPNRVEGKLHKSFVEEIAC 575
Query: 329 GWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 387
G H A + S ++ TWG G S G+LGHG+ D PT+V ++ +
Sbjct: 576 GAYHVAVLTSRTEVYTWGKG------------SNGRLGHGDVDDRNSPTLVESLKDKQVK 623
Query: 388 QVSCGFNHTGAL 399
++CG N T A+
Sbjct: 624 SIACGTNFTAAV 635
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 84/164 (51%), Gaps = 10/164 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G+ E + P +A + + +ACG + T+ LT +G VY G +GQ
Sbjct: 488 WGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 547
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG S G + P R+ G K V +I+ G +H + +T E+Y WGK SNG+LG G
Sbjct: 548 LGNSHADGKT--PNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDV 605
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ PT VE L K A G + AV + W +G
Sbjct: 606 DDRN--SPTLVESLKDKQVKSIACGTNFTAAVC----IHRWASG 643
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 104/239 (43%), Gaps = 54/239 (22%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G + +V VT G+ SWG GRLGHG +S+I
Sbjct: 285 LPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNI--------- 335
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
P+LI L +++ A G HS +
Sbjct: 336 QQPKLIDALNTTNIELVACGEFHSCAV------------------------------TLS 365
Query: 287 GELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTW 344
G+LYTWG + G LG G+ +V H P+RV V ++CG HTA + S G++ T+
Sbjct: 366 GDLYTWGKGDFGVLGHGN-EVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTF 424
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
G GTF G LGHG+ P V+ + ++ ++ +CG HT A++E +
Sbjct: 425 G----DGTF--------GVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVM 471
>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
guttata]
Length = 4864
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 159/322 (49%), Gaps = 46/322 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4055 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4114
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4115 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 4173
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G +VAV T G V ++G G G+LG G
Sbjct: 4174 TSNK--KLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGN----- 4226
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4227 ----STAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4282
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV-- 314
R +L S G++Y WGSN G LG+G + + P V
Sbjct: 4283 NRPQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4342
Query: 315 -QGPFSESPVDQVSCGWKHTAA 335
QG V Q+S G H+AA
Sbjct: 4343 LQG----KNVRQISAGRCHSAA 4360
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 127/245 (51%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4109 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 4168
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4169 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNS 4227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4228 TAK--SSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4277
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ + L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4278 -RARNHNRPQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVRE 4336
Query: 281 PSLIS 285
P+L++
Sbjct: 4337 PTLVT 4341
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 154/334 (46%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IP K I + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRNIPTLVK----DIINVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 GG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLASSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG S+++ P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+ +
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVKDIIN- 562
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 563 --VGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 119/230 (51%), Gaps = 22/230 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVV---QISTGYHHSSAITVDGE-LYMWGKNSNGQLGL 157
+LG ++ + I L K+++ ++S G H+ A++ DG ++ +G NG+LG
Sbjct: 542 RLGHGDSNSRN-----IPTLVKDIINVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH 596
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 597 GD--TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSE 650
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 651 ATALR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4034 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4091
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4092 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4142
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4143 SCGFKHSAVVTADGKLFTFGN----------GDYGR--------------------LGLG 4172
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4173 NTSNKKLPERVTA-LEGYQIGQVACGLNHTVAVSTDGSMVWAFG--------DGDY--GK 4221
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4222 LGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVAL 4257
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 86/189 (45%), Gaps = 11/189 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSWGAGGSGRLGHGQESSIL 218
+ P KV L GI +Q + G S+A T +V++W L E S
Sbjct: 704 GPITK-PKKVGGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDL----EESTF 758
Query: 219 GFLRSTSEY 227
LRS E+
Sbjct: 759 SHLRSFLEH 767
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDI--INVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVGGLDGIAIQQISAGTSHS 730
>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
Length = 1017
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 159/342 (46%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 71 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 127
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 128 LADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 186
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 187 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 238
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AAG HS + +G V + WG N G
Sbjct: 239 LAQVAAGGAHSFALSLSGAV------------------------------FAWGMNNAGQ 268
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ + SP V+ ++ V +SCG +HTA +++ G + T+G G
Sbjct: 269 LGLSDEEDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG----------- 316
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT A +
Sbjct: 317 -SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 357
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 141/321 (43%), Gaps = 56/321 (17%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A ++ +ACG +H+L L++ G +++ G GQLG+ P I
Sbjct: 121 KPEQIGALADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 180
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++Q+S G H A+ DG+ + WGKNS+GQLGLGK+ P +V L GI
Sbjct: 181 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-PQRVRSLEGIPL 239
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V +WG +G+LG E +P +K L K
Sbjct: 240 AQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEE---------DRESPCHVKLLRTQK 290
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
V + G H+A + ++G V +T+G+ G
Sbjct: 291 VVYISCGEEHTAVLTKSGGV------------------------------FTFGAGSCGQ 320
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDG 357
LG S++ +P RV S V Q++CG +HT A S G I +G G
Sbjct: 321 LGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR-------- 371
Query: 358 HSSGGQLGHGNDVDYIHPTIV 378
GQLG G+ + P+ V
Sbjct: 372 ----GQLGTGHTCNVKCPSPV 388
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 14/224 (6%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL + E S P + + ++ ++CG H L L G + G N G
Sbjct: 155 WGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG 214
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q++ G HS A+++ G ++ WG N+ GQLGL +
Sbjct: 215 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDE 274
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P V+ L + G E + +T G V ++GAG G+LGH +
Sbjct: 275 EDR--ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN----- 327
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
E PR + EL G +V A G H+ A + +G +Y FG
Sbjct: 328 ----DEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 367
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 94/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+A G+N+ G
Sbjct: 208 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFAWGMNNAG 267
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 268 QLGLSDEEDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 326
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 327 NDEV--NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 382
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 106/271 (39%), Gaps = 49/271 (18%)
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
Q G+ ++ P +S K+ A G SV + G+V + G G+LGH +
Sbjct: 58 QPGISTNLRGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHER 117
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---------- 263
E + P I L + A G HS + + G+++ +G
Sbjct: 118 EGN-----------KPEQIGALADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLM 166
Query: 264 ---DRAVDKMLFQEGNHA----------RRPSLISGGELYTWGSNENGCLGIG-SIDVLH 309
D L Q+ N +L + G+ +TWG N +G LG+G
Sbjct: 167 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQA 226
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
SP+RV+ P+ QV+ G H+ A+S G + WG ++ GQLG +
Sbjct: 227 SPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFAWGM------------NNAGQLGLSD 273
Query: 369 DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ D P V K + +SCG HT L
Sbjct: 274 EEDRESPCHVKLLRTQKVVYISCGEEHTAVL 304
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL E R P + ++CG HT LT++G V+ G GQ
Sbjct: 261 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 320
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 321 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 379
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 380 CNVKCPSPVK 389
>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 1063
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 164/364 (45%), Gaps = 60/364 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G LGLG +E P + +++ ACGG+HTL LT+ G +Y G ND
Sbjct: 6 WGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDH 65
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG N + P IS L+ +V Q+S G HS A+T G+L+ WG N+ GQLG
Sbjct: 66 GQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDL 125
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P P ++ ++ Q + G +A+T G++ +WGA G+LG G
Sbjct: 126 DMVSY-PAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLG------- 177
Query: 220 FLRSTSEYTP--RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
+T + P L+K L G+ + A G GNH
Sbjct: 178 ---TTGKKVPTATLVKSLAGIPIAFIACG----------------------------GNH 206
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
+ S G ++ WG N G LG+ +D P +++ S V +SCG + ++
Sbjct: 207 SFAVS--KSGAIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLG-VRYISCGDDFSVFLT 263
Query: 338 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
EG + T G GTF GQLGHG + I P +V K Q++CG HT
Sbjct: 264 QEGGVFTCGL----GTF--------GQLGHGTHGNEILPRMVFELMGSKITQIACGRKHT 311
Query: 397 GALL 400
A +
Sbjct: 312 LAFV 315
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 138/306 (45%), Gaps = 53/306 (17%)
Query: 44 GNGDYGRLG--LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
GN D+G+LG +L ++ RP SA E + + ++CG +H+L LT G +++ G N G
Sbjct: 61 GNNDHGQLGHDTNNLPNK-RPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATG 119
Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG ++ P I + K VVQIS G+ H A+T GEL+ WG N GQLGLG
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTT 179
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
KV P T V+ L+GI A G S AV+ G + WG G+LG
Sbjct: 180 GKKV-PTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLD----- 233
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S P +K L + V+ + G D +V L QEG
Sbjct: 234 ----SRCYPTQLKTLRSLGVRYISCG----------------DDFSV--FLTQEGG---- 267
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPE---RVQGPFSESPVDQVSCGWKHTAAI- 336
++T G G LG G+ H E R+ S + Q++CG KHT A
Sbjct: 268 --------VFTCGLGTFGQLGHGT----HGNEILPRMVFELMGSKITQIACGRKHTLAFV 315
Query: 337 -SEGKI 341
S GK+
Sbjct: 316 PSRGKV 321
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
LY WG +G+LGLG + + P +++ +QAA G ++ +T GK+ + G
Sbjct: 3 LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH + P+ I LE V + G HS + G+++ +G
Sbjct: 63 NDHGQLGHDT--------NNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWG 114
Query: 264 DRA-------VDKMLFQEGN----------------HARRPSLISGGELYTWGSNENGCL 300
A +D + + H+ +L + GEL+ WG+NE G L
Sbjct: 115 SNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQL 174
Query: 301 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHS 359
G+G+ + + P+ ++CG H+ A+S+ G I WG TF
Sbjct: 175 GLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWG----KNTF------ 224
Query: 360 SGGQLGHGNDVD-YIHPTIVNFGENVKALQVSCG 392
GQLG ND+D +PT + ++ +SCG
Sbjct: 225 --GQLGL-NDLDSRCYPTQLKTLRSLGVRYISCG 255
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 23/118 (19%)
Query: 289 LYTWGSNENGCLGIGSIDVLHSPERVQGPF-----SESPVDQVSCGWKHTAAIS-EGKIL 342
LY WGS +G LG+G I+ E+V P + V Q +CG HT ++ +GK+
Sbjct: 3 LYCWGSTVHGELGLGGIE----EEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLY 58
Query: 343 TWGWGGSHGTFSEDGHSSGGQLGHG-NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
T G++ GQLGH N++ P ++ EN QVSCG +H+ AL
Sbjct: 59 TC------------GNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLAL 104
>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
Length = 1050
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 159/342 (46%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L E +V ++ G HS A++ G+L+ WG S+GQLGL + + +P ++ L+
Sbjct: 81 LADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEESVAVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AAG HS + +G V FG WG N G
Sbjct: 192 LAQVAAGGAHSFALSLSGAV--FG----------------------------WGMNNAGQ 221
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ + SP V+ V +SCG +HTA +++ G + T+G G
Sbjct: 222 LGLSDEEDRESPCHVKL-LRAQKVVYISCGEEHTAVLTKSGGVFTFGAG----------- 269
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT A +
Sbjct: 270 -SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL E R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Takifugu
rubripes]
Length = 3883
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 156/319 (48%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + + P + SAF+ + + L +CG H++ LTETG V++ G DF
Sbjct: 3075 GEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDF 3134
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ ++VVQ++ G+ HS+ +T DG+L+ +G +G+LG
Sbjct: 3135 GKLGHGNN-ERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQRS 3193
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
+ K+ +P +V L G Q + G ++ ++ G V ++G G G+LG G
Sbjct: 3194 TSNKM--LPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGS----- 3246
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV----DKMLFQE 274
ST++Y P+ +++L +K G S + +G VY FG + D ML
Sbjct: 3247 ----STAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYTFGQERLIGLPDSMLKNR 3302
Query: 275 GNHARRPS------------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
N PS L S G++Y WG N G LG+G + + P +
Sbjct: 3303 SNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGCNSEGQLGLGHCNPVKEPTLITA 3362
Query: 317 PFSESPVDQVSCGWKHTAA 335
+ Q+S G H++A
Sbjct: 3363 -LQGKNIKQISAGRCHSSA 3380
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 161/363 (44%), Gaps = 66/363 (18%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
G G YGRLGLG ++ P ++K ++ HTL +T G V++ G ++
Sbjct: 437 GKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFSWGDGEY 496
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG N P I G K VV S GY HS+A+T DGELY WG+ G+LG
Sbjct: 497 GKLG-HGNSATQKYPKIIQGPLFSKIVVSASAGYRHSAAVTKDGELYTWGEGDFGRLGHS 555
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ +PT V+ +SG+ Q A G ++AV G+ V S+G G +G+LGHG + +
Sbjct: 556 DSQSR--NMPTLVKDISGV--GQVACGSSHTIAVAQDGRTVWSFGGGDNGKLGHGDTNRV 611
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L G ++ AG S
Sbjct: 612 ---------YRPKVIEALHGFIIRKVCAGSQSSL-------------------------- 636
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
+L S G+++ WG CLG GS + R S + + +SCG H A+S
Sbjct: 637 ----ALTSAGQVFAWGC--GSCLGCGSSETTSLRPRFVEDLSITKIIDISCGDSHCLALS 690
Query: 338 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI-HPTIVNFGENVKALQVSCGFNH 395
E ++ W G+++ GQ G G+ I P V E V Q++ G +H
Sbjct: 691 HENEVYAW------------GNNTMGQCGQGHTSTPITRPKKVLGLEGVSIQQITAGTSH 738
Query: 396 TGA 398
+ A
Sbjct: 739 SLA 741
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 120/248 (48%), Gaps = 18/248 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD+G+LG G+ E + RP A + + LACG H+ +T G ++ G + G+
Sbjct: 3129 WGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGR 3188
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKK 160
LG + + P R++ L+ V Q+S G +H+ +++DG ++ +G G+LG G
Sbjct: 3189 LG-QRSTSNKMLPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSS 3247
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KVE L K+ G + SV V G V ++G + ++G
Sbjct: 3248 TAKY--YPQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYTFG-----------QERLIGL 3294
Query: 221 LRST--SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S + P+++ LEG+ ++ A G H + G VY +G + ++ N
Sbjct: 3295 PDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGCNSEGQLGLGHCNPV 3354
Query: 279 RRPSLISG 286
+ P+LI+
Sbjct: 3355 KEPTLITA 3362
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 112/230 (48%), Gaps = 22/230 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSA--FEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+G+YG+LG G+ ++ P + F K + A A G H+ +T+ G +Y G DF
Sbjct: 491 WGDGEYGKLGHGNSATQKYPKIIQGPLFSKIVVSASA-GYRHSAAVTKDGELYTWGEGDF 549
Query: 101 GQLGISENIGYSLEPL--RISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGL 157
G+LG S++ ++ L ISG V Q++ G H+ A+ DG ++ +G NG+LG
Sbjct: 550 GRLGHSDSQSRNMPTLVKDISG----VGQVACGSSHTIAVAQDGRTVWSFGGGDNGKLGH 605
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P +E L G ++ G + S+A+T G+V +WG G LG G
Sbjct: 606 GD--TNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSC--LGCGSS--- 658
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
T+ PR +++L K+ + G H + VY +G+ +
Sbjct: 659 -----ETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTM 703
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 146/334 (43%), Gaps = 53/334 (15%)
Query: 92 VYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
VY G N QL G E I L P G + I G + + +++ DG + GK
Sbjct: 383 VYVWGSNSSHQLAEGTLEKI---LLPKLTQGFS-DAQTIEAGQYCTFSVSTDGSVKACGK 438
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSWGAGGSGR 208
S G+LGLG + +P +E I ++ G + ++A+T G+V SWG G G+
Sbjct: 439 GSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFSWGDGEYGK 498
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAV 267
LGHG S ++ P++I+ K+ + A+AG+ HSA + ++G +Y +G+
Sbjct: 499 LGHGN---------SATQKYPKIIQGPLFSKIVVSASAGYRHSAAVTKDGELYTWGEGDF 549
Query: 268 DKMLFQEGNHARRPSLI---------------------SGGELYTWGSNENGCLGIGSID 306
++ + P+L+ G ++++G +NG LG G +
Sbjct: 550 GRLGHSDSQSRNMPTLVKDISGVGQVACGSSHTIAVAQDGRTVWSFGGGDNGKLGHGDTN 609
Query: 307 VLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLG 365
++ P+ ++ + +V G + + A+ S G++ WG G G S + S
Sbjct: 610 RVYRPKVIEA-LHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETTS------ 662
Query: 366 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ P V K + +SCG +H AL
Sbjct: 663 -------LRPRFVEDLSITKIIDISCGDSHCLAL 689
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 124/304 (40%), Gaps = 58/304 (19%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
VY G +GQL G +L ++ + Q+ G + S I +G + G+
Sbjct: 3022 VYLWGNGRYGQLA---GTGTNLTVPTLAPSLSQTQQVVCGQNCSFLIQSNGVVTAVGEGQ 3078
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AALGFE-QSVAVTGGGKVLSWGAGGSGR 208
G+LG G + + +PT + G Q + G + S+A+T G+V SWG G G+
Sbjct: 3079 YGRLGQGN--SDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFGK 3136
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + + P+ I+ L+G V A GF HSA + +G+
Sbjct: 3137 LGHGN---------NERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGK---------- 3177
Query: 269 KMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 328
L+T+GS E+G LG S PERV V QVSC
Sbjct: 3178 --------------------LFTFGSGESGRLGQRSTSNKMLPERVAA-LEGYHVGQVSC 3216
Query: 329 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 388
G HT +S + W +G DG G+LG G+ +P V N +
Sbjct: 3217 GLNHTLVLSLDGMAVWAFG--------DGDY--GKLGAGSSTAKYYPQKVEQLCNKGMKK 3266
Query: 389 VSCG 392
V CG
Sbjct: 3267 VCCG 3270
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 83/184 (45%), Gaps = 7/184 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G +RP V A ++ + G +L LT G V+A G
Sbjct: 595 FGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLG 654
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G SE SL P + L +++ IS G H A++ + E+Y WG N+ GQ G G +
Sbjct: 655 CGSSETT--SLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTS 712
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSV---AVTGGGKVLSWGAGGSGRLGHGQESSIL 218
I P KV L G+ +Q G S+ AV ++++W L + +
Sbjct: 713 TP-ITRPKKVLGLEGVSIQQITAGTSHSLAWTAVPTDRQLVAWHRPFCVDLEESTFTYLC 771
Query: 219 GFLR 222
FL+
Sbjct: 772 NFLK 775
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG +SR P + + +ACG +HT+ + + G V++ G D G
Sbjct: 544 WGEGDFGRLGHSDSQSRNMPTLVKDIS--GVGQVACGSSHTIAVAQDGRTVWSFGGGDNG 601
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + P I L ++ ++ G S A+T G+++ WG S LG G
Sbjct: 602 KLGHGDT-NRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSC--LGCGSS 658
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P VE LS + G +A++ +V +WG G+ G G S+ +
Sbjct: 659 ETTSL-RPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPIT- 716
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
P+ + LEGV ++ AG HS
Sbjct: 717 -------RPKKVLGLEGVSIQQITAGTSHS 739
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 56 LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEP 115
L++R P V + E ++ +A G H L L+ TG VYA G N GQLG+ + EP
Sbjct: 3299 LKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGCNSEGQLGLG-HCNPVKEP 3357
Query: 116 LRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
I+ L+ K + QIS G HSSA T G N QLGL +
Sbjct: 3358 TLITALQGKNIKQISAGRCHSSAWTTPSTSKNSGGPGNLQLGLPQ 3402
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 285 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV--SCGWK-HTAAISE-GK 340
S G + G + G LG G+ D L+ P + F V Q+ SCG H+ A++E G+
Sbjct: 3067 SNGVVTAVGEGQYGRLGQGNSDDLYVPTIISA-FQGYVVTQLVTSCGSDGHSMALTETGE 3125
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ +WG G F G+LGHGN+ P + + +Q++CGF H+ +
Sbjct: 3126 VFSWG----DGDF--------GKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVV 3172
>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4846
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 160/322 (49%), Gaps = 46/322 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4037 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4096
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4097 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4155
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G V+ ++G G G+LG G
Sbjct: 4156 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGN----- 4208
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4209 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4264
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV-- 314
R +L S G++Y WGSN G LG+G + + P V
Sbjct: 4265 NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4324
Query: 315 -QGPFSESPVDQVSCGWKHTAA 335
QG + Q+S G H+AA
Sbjct: 4325 LQG----KNIRQISAGRCHSAA 4342
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 127/245 (51%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4091 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4150
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG ++ +G G+LGLG
Sbjct: 4151 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNS 4209
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4210 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4259
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4260 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4318
Query: 281 PSLIS 285
P+L++
Sbjct: 4319 PTLVT 4323
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 129/298 (43%), Gaps = 60/298 (20%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVI 608
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4016 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4073
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4074 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4124
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4125 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4154
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4155 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSVVWAFG--------DGDY--GK 4203
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4204 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4239
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+++T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S ++T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|310819121|ref|YP_003951479.1| regulator of chromosome condensation-like protein [Stigmatella
aurantiaca DW4/3-1]
gi|309392193|gb|ADO69652.1| regulator of chromosome condensation-like protein [Stigmatella
aurantiaca DW4/3-1]
Length = 732
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 175/385 (45%), Gaps = 64/385 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN G+ G GS ++ PV +A +A G AH L + G V+A G N FGQ
Sbjct: 356 WGNNIEGQRGDGSAKTSTAPVQVTALSGG--FTVAAGKAHALAVRSDGTVWAWGQNLFGQ 413
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P++++GL V ++ G HS + +DG ++ WG+N++GQLG G A
Sbjct: 414 LGDGTRM-QRTAPVQVTGLSGGVA-VAAGDDHSLGLCLDGTVWAWGQNTSGQLGDGTTAQ 471
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P P +V LSG+ A G S+AV+ G V +WG+ SG+LG G + L
Sbjct: 472 R--PAPVQVTELSGVVA--VAAGTSHSLAVSSDGTVWAWGSNASGQLGDGTTRARL---- 523
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ--EGNHARR 280
TP + L GV AAG+ HS + +G V+ +G+ + FQ +G + +R
Sbjct: 524 -----TPVQVAGLSGVVA--VAAGYFHSLAVRSDGTVWAWGNNS----FFQLGDGTNTQR 572
Query: 281 PS----------------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
P+ L S G ++ WG+N G LG G+ + SP +V G
Sbjct: 573 PTPVRVPGLSGGVAAAAGYFHSLVLRSDGTVWGWGNNAYGQLGNGTANASFSPVQVTGL- 631
Query: 319 SESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
V + ++ A S+G + WG + GQLG G + P V
Sbjct: 632 -SGGVAVAAGDFQSLAVRSDGTVRAWG------------DNIYGQLGDGTVTTRLAPVGV 678
Query: 379 NFGENVKALQVSCGFN---HTGALL 400
N A+ GF+ H+G +L
Sbjct: 679 NGLSGGMAVAAGNGFSLAVHSGGML 703
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 112/365 (30%), Positives = 161/365 (44%), Gaps = 69/365 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G LG G+ R RPV + + +A+A G H+L + G V+A G N GQ
Sbjct: 106 WGHNGSGELGDGTTFRRTRPVQVTGLSE--AEAVAAGDGHSLVVRSDGTVWAWGWNSDGQ 163
Query: 103 LGISENIGYSLE---PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG G + E P++++GL V+++ G HS A+ +DG ++ WG+N +GQLG G
Sbjct: 164 LG----DGTTRERHVPVQVAGLSGG-VKVAAGDGHSLAVCLDGTVWAWGRNDSGQLGDGT 218
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P+ +V LSG+ A G S+AV G V +WG G+LG G S+ L
Sbjct: 219 TVQRSAPV--QVAGLSGVVA--VAAGSSHSLAVRSDGTVWAWGRNSDGQLGDGTTSARL- 273
Query: 220 FLRSTSEYTPRLIKELE-GVKVKIAAAGFLHSACIDENGRVYIFGDRA------------ 266
TP + L GV V AAG HS + +G V+ +G
Sbjct: 274 --------TPVQVTGLSGGVAV---AAGMFHSLAVRSDGTVWAWGQNTRGQLGDGSMTAS 322
Query: 267 ---VDKMLFQEGN---HARRPSLI--SGGELYTWGSNENGCLGIGSIDVLHSPERV---Q 315
V + EG SL+ S G ++ WG+N G G GS +P +V
Sbjct: 323 LTPVQAIGLSEGEAVAAGETHSLVARSDGTVWAWGNNIEGQRGDGSAKTSTAPVQVTALS 382
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G F+ V+ G H A+ S+G + WG F GQLG G +
Sbjct: 383 GGFT------VAAGKAHALAVRSDGTVWAWG----QNLF--------GQLGDGTRMQRTA 424
Query: 375 PTIVN 379
P V
Sbjct: 425 PVQVT 429
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 157/356 (44%), Gaps = 55/356 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ R PV + A+A G H+L L G V+A G N GQ
Sbjct: 406 WGQNLFGQLGDGTRMQRTAPVQVTGLSGG--VAVAAGDDHSLGLCLDGTVWAWGQNTSGQ 463
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG P++++ L VV ++ G HS A++ DG ++ WG N++GQLG G A
Sbjct: 464 LG-DGTTAQRPAPVQVTELSG-VVAVAAGTSHSLAVSSDGTVWAWGSNASGQLGDGTTRA 521
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V LSG+ A G+ S+AV G V +WG +LG G
Sbjct: 522 RLTPV--QVAGLSGVVA--VAAGYFHSLAVRSDGTVWAWGNNSFFQLGDGTN-------- 569
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T TP + L G AAAG+ HS + +G V+ +G+ A ++ N + P
Sbjct: 570 -TQRPTPVRVPGLSGGVA--AAAGYFHSLVLRSDGTVWGWGNNAYGQLGNGTANASFSPV 626
Query: 283 LISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
++G G + WG N G LG G++ +P V G S
Sbjct: 627 QVTGLSGGVAVAAGDFQSLAVRSDGTVRAWGDNIYGQLGDGTVTTRLAPVGVNG---LSG 683
Query: 323 VDQVSCGWKHTAAISEGKIL-TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 377
V+ G + A+ G +L W G+++ GQLGHG Y+ +
Sbjct: 684 GMAVAAGNGFSLAVHSGGMLHAW------------GYNTDGQLGHGGPSVYVTAAV 727
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 164/376 (43%), Gaps = 59/376 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV + +K +A G H+L + G V+A G ND GQ
Sbjct: 156 WGWNSDGQLGDGTTRERHVPVQVAGLSG-GVK-VAAGDGHSLAVCLDGTVWAWGRNDSGQ 213
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S P++++GL VV ++ G HS A+ DG ++ WG+NS+GQLG G +A
Sbjct: 214 LGDGTTVQRS-APVQVAGLSG-VVAVAAGSSHSLAVRSDGTVWAWGRNSDGQLGDGTTSA 271
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V LSG A G S+AV G V +WG G+LG G
Sbjct: 272 RLTPV--QVTGLSGGVA--VAAGMFHSLAVRSDGTVWAWGQNTRGQLGDGSM-------- 319
Query: 223 STSEYTP-RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR---------------- 265
T+ TP + I EG V AAG HS +G V+ +G+
Sbjct: 320 -TASLTPVQAIGLSEGEAV---AAGETHSLVARSDGTVWAWGNNIEGQRGDGSAKTSTAP 375
Query: 266 ----AVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
A+ A ++ S G ++ WG N G LG G+ +P +V G S
Sbjct: 376 VQVTALSGGFTVAAGKAHALAVRSDGTVWAWGQNLFGQLGDGTRMQRTAPVQVTG---LS 432
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
V+ G H+ + +G + W G ++ GQLG G P V
Sbjct: 433 GGVAVAAGDDHSLGLCLDGTVWAW------------GQNTSGQLGDGTTAQ--RPAPVQV 478
Query: 381 GENVKALQVSCGFNHT 396
E + V+ G +H+
Sbjct: 479 TELSGVVAVAAGTSHS 494
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 141/324 (43%), Gaps = 45/324 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG G+ R P L +A G +H+L + G +A G N G+L
Sbjct: 57 GSNTSGQLGDGTTSERRVPAQVVGLSDAVL--VAAGSSHSLAIRSDGTAWAWGHNGSGEL 114
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
G P++++GL E ++ G HS + DG ++ WG NS+GQLG G +
Sbjct: 115 GDGTTF-RRTRPVQVTGLS-EAEAVAAGDGHSLVVRSDGTVWAWGWNSDGQLGDGTTRER 172
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+P+ +V LSG + A G S+AV G V +WG SG+LG G +
Sbjct: 173 HVPV--QVAGLSGGV--KVAAGDGHSLAVCLDGTVWAWGRNDSGQLGDGT---------T 219
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR-RPS 282
P + L GV AAG HS + +G V+ +G R D L AR P
Sbjct: 220 VQRSAPVQVAGLSGVVA--VAAGSSHSLAVRSDGTVWAWG-RNSDGQLGDGTTSARLTPV 276
Query: 283 LISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
++G G ++ WG N G LG GS+ +P + G SE
Sbjct: 277 QVTGLSGGVAVAAGMFHSLAVRSDGTVWAWGQNTRGQLGDGSMTASLTPVQAIG-LSEG- 334
Query: 323 VDQVSCGWKHT-AAISEGKILTWG 345
+ V+ G H+ A S+G + WG
Sbjct: 335 -EAVAAGETHSLVARSDGTVWAWG 357
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 139/324 (42%), Gaps = 59/324 (18%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
LA GG+H+L + G V+A G N GQLG + P ++ GL V+ ++ G HS
Sbjct: 37 LAAGGSHSLAIRPDGTVWAAGSNTSGQLGDGTTSERRV-PAQVVGLSDAVL-VAAGSSHS 94
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
AI DG + WG N +G+LG G + P+ +V LS + A G S+ V
Sbjct: 95 LAIRSDGTAWAWGHNGSGELGDGTTFRRTRPV--QVTGLS--EAEAVAAGDGHSLVVRSD 150
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE-GVKVKIAAAGFLHSACID 254
G V +WG G+LG G + + P + L GVKV AAG HS +
Sbjct: 151 GTVWAWGWNSDGQLGDGT---------TRERHVPVQVAGLSGGVKV---AAGDGHSLAVC 198
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLI----------------------SGGELYTW 292
+G V+ +G D +G +R + + S G ++ W
Sbjct: 199 LDGTVWAWGRN--DSGQLGDGTTVQRSAPVQVAGLSGVVAVAAGSSHSLAVRSDGTVWAW 256
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 351
G N +G LG G+ +P +V G S V+ G H+ A+ S+G + W
Sbjct: 257 GRNSDGQLGDGTTSARLTPVQVTG---LSGGVAVAAGMFHSLAVRSDGTVWAW------- 306
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHP 375
G ++ GQLG G+ + P
Sbjct: 307 -----GQNTRGQLGDGSMTASLTP 325
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 113/274 (41%), Gaps = 51/274 (18%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
+++ G HS AI DG ++ G N++GQLG G + + +P +V LS A G
Sbjct: 36 RLAAGGSHSLAIRPDGTVWAAGSNTSGQLGDGTTSER--RVPAQVVGLSDAVL--VAAGS 91
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S+A+ G +WG GSG LG G R T + E E V AAG
Sbjct: 92 SHSLAIRSDGTAWAWGHNGSGELGDGTT------FRRTRPVQVTGLSEAEAV-----AAG 140
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG-------------------- 286
HS + +G V+ +G + ++ P ++G
Sbjct: 141 DGHSLVVRSDGTVWAWGWNSDGQLGDGTTRERHVPVQVAGLSGGVKVAAGDGHSLAVCLD 200
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 345
G ++ WG N++G LG G+ +P +V G S V V+ G H+ A+ S+G + W
Sbjct: 201 GTVWAWGRNDSGQLGDGTTVQRSAPVQVAG---LSGVVAVAAGSSHSLAVRSDGTVWAW- 256
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
G +S GQLG G + P V
Sbjct: 257 -----------GRNSDGQLGDGTTSARLTPVQVT 279
>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
caballus]
Length = 1050
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 161/342 (47%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G H+ A++ G+L+ WG S+GQLGL + +P ++ L+
Sbjct: 81 LADQHIVHVACGESHNLALSDRGQLFSWGAGSDGQLGL-MTTEDAVAVPRVIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G S+A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHSLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AAG HS + +G V FG WG N G
Sbjct: 192 LAQVAAGGAHSFALSLSGAV--FG----------------------------WGMNNAGQ 221
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ + SP V+ ++ V +SCG +HTA +++ G + T+G G
Sbjct: 222 LGLSDEEDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG----------- 269
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT A +
Sbjct: 270 -SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310
>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4853
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 160/322 (49%), Gaps = 46/322 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4044 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4103
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4104 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4162
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G V+ ++G G G+LG G
Sbjct: 4163 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGN----- 4215
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4216 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4271
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV-- 314
R +L S G++Y WGSN G LG+G + + P V
Sbjct: 4272 NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4331
Query: 315 -QGPFSESPVDQVSCGWKHTAA 335
QG + Q+S G H+AA
Sbjct: 4332 LQG----KNIRQISAGRCHSAA 4349
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 127/245 (51%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4098 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4157
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG ++ +G G+LGLG
Sbjct: 4158 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNS 4216
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4217 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4266
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4267 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4325
Query: 281 PSLIS 285
P+L++
Sbjct: 4326 PTLVT 4330
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 129/298 (43%), Gaps = 60/298 (20%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVI 608
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4023 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4080
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4081 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4131
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4132 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4161
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4162 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSVVWAFG--------DGDY--GK 4210
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4211 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4246
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+++T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S ++T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1-like [Equus caballus]
Length = 4860
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 159/322 (49%), Gaps = 46/322 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4111 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4169
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV T G V ++G G G+LG G
Sbjct: 4170 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGN----- 4222
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4223 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4278
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV-- 314
R +L S G++Y WGSN G LG+G + + P V
Sbjct: 4279 NRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4338
Query: 315 -QGPFSESPVDQVSCGWKHTAA 335
QG + Q+S G H+AA
Sbjct: 4339 LQG----KNIRQISAGRCHSAA 4356
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 128/245 (52%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4164
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4165 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNS 4223
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4224 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4273
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4274 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4332
Query: 281 PSLIS 285
P+L++
Sbjct: 4333 PTLVT 4337
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 168/363 (46%), Gaps = 66/363 (18%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSL-------------------------- 627
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
+L S G++Y WG CLG GS + ++ + + + +S G H A+S
Sbjct: 628 ----ALTSTGQVYAWGC--GACLGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALS 681
Query: 338 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI-HPTIVNFGENVKALQVSCGFNH 395
+ ++ W G++S GQ G GN I P V+ + + Q+S G +H
Sbjct: 682 HDNEVYAW------------GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSH 729
Query: 396 TGA 398
+ A
Sbjct: 730 SLA 732
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+L++EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4087
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4088 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4138
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4139 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4168
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4169 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSTDGSMVWAFG--------DGDY--GK 4217
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4218 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4253
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P + L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P VE L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
Length = 434
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 149/336 (44%), Gaps = 59/336 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G ++ + P A + ++ACG HTL T G ++A G N GQ
Sbjct: 87 WGWGDFGRLGTGDVKDVFIPCPLPALAGRRVASVACGDTHTLVATAEGQLFAFGRNQNGQ 146
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G+ +I LEP ++ L+ KEVV ++ G HS +T +GE+Y WG G +G G+
Sbjct: 147 CGLG-SIQDCLEPQLVTALQGKEVVAVACGAEHSMCVTSEGEVYCWGWGRYGNIGDGESQ 205
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +PT + L G+ Q G+ S+AV GG + +WG G +L G
Sbjct: 206 DR--HLPTLAKGLEGVKVAQVNCGWRHSIAVDEGGAMYTWGWGAYAQLMQGDRK------ 257
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
Y P+ ++ ++ +V A G+ H+ D GR
Sbjct: 258 ---DHYVPKRVEAVQ--QVATVAGGWRHTMAADSQGR----------------------- 289
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GK 340
L+ G N+ G G+G + + ++V+ E V QV GWKHT A++ GK
Sbjct: 290 -------LFASGWNKFGQCGVGHNEDVVRVQQVEALAGERVV-QVKSGWKHTMAVTHTGK 341
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 376
+W G + GQLGH D P
Sbjct: 342 FFSW------------GRNVNGQLGHSGMQDSNSPV 365
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 151/351 (43%), Gaps = 53/351 (15%)
Query: 76 LACGGAHTLFLTET---GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
LACG +H+L L T V + G + GQLG + S L + + G
Sbjct: 12 LACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVHCGA 71
Query: 133 HHSSAIT-VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
+S A+ D ++Y WG G+LG G K + IP + L+G A G ++
Sbjct: 72 EYSMAVAGGDKQVYSWGWGDFGRLGTGD--VKDVFIPCPLPALAGRRVASVACGDTHTLV 129
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
T G++ ++G +G+ G LG ++ E P+L+ L+G +V A G HS
Sbjct: 130 ATAEGQLFAFGRNQNGQCG-------LGSIQDCLE--PQLVTALQGKEVVAVACGAEHSM 180
Query: 252 CIDENGRVYIFG-------------DR-------AVDKMLFQEGNHARRPSLI--SGGEL 289
C+ G VY +G DR ++ + + N R S+ GG +
Sbjct: 181 CVTSEGEVYCWGWGRYGNIGDGESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAVDEGGAM 240
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWGWGG 348
YTWG L G + P+RV+ + V V+ GW+HT AA S+G++ GW
Sbjct: 241 YTWGWGAYAQLMQGDRKDHYVPKRVE---AVQQVATVAGGWRHTMAADSQGRLFASGW-- 295
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
F + G +GH DV + GE V +QV G+ HT A+
Sbjct: 296 --NKFGQCG------VGHNEDVVRVQQVEALAGERV--VQVKSGWKHTMAV 336
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 118/285 (41%), Gaps = 59/285 (20%)
Query: 122 KKEVVQISTGYHHSSAI--TVDGELYM-WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+ EV+ ++ G HS A+ T G + + WG+ +GQLG G A+ P V L
Sbjct: 6 EPEVIGLACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGD--AEDRQEPQAVFSLLHRG 63
Query: 179 TKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
G E S+AV GG K V SWG G GRLG G + + P + L G
Sbjct: 64 ATSVHCGAEYSMAVAGGDKQVYSWGWGDFGRLGTGDVKDV---------FIPCPLPALAG 114
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNEN 297
+V A G H+ G+++ FG N+N
Sbjct: 115 RRVASVACGDTHTLVATAEGQLFAFG------------------------------RNQN 144
Query: 298 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSED 356
G G+GSI P+ V V V+CG +H+ + SEG++ WGWG
Sbjct: 145 GQCGLGSIQDCLEPQLVTA-LQGKEVVAVACGAEHSMCVTSEGEVYCWGWG--------- 194
Query: 357 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G +G G D PT+ E VK QV+CG+ H+ A+ E
Sbjct: 195 ---RYGNIGDGESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAVDE 236
>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus gallus]
Length = 4860
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 159/322 (49%), Gaps = 46/322 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4111 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 4169
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G +VAV T G V ++G G G+LG G
Sbjct: 4170 TSNK--KLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGN----- 4222
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4223 ----STAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4278
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV-- 314
R +L S G++Y WGSN G LG+G + + P +
Sbjct: 4279 NRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITV 4338
Query: 315 -QGPFSESPVDQVSCGWKHTAA 335
QG + Q+S G H+AA
Sbjct: 4339 LQG----KNIRQISAGRCHSAA 4356
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 127/245 (51%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 4164
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4165 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNS 4223
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4224 TAK--SSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4273
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ + L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4274 -RARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVRE 4332
Query: 281 PSLIS 285
P+LI+
Sbjct: 4333 PTLIT 4337
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGVSIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4030 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4087
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4088 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4138
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4139 SCGFKHSAVVTADGKLFTFGN----------GDYGR--------------------LGLG 4168
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4169 NTSNKKLPERVTA-LEGYQIGQVACGLNHTVAVSTDGSMVWAFG--------DGDY--GK 4217
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4218 LGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVAL 4253
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 86/189 (45%), Gaps = 11/189 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSWGAGGSGRLGHGQESSIL 218
+ P KV L G+ +Q + G S+A T +V++W L E S
Sbjct: 704 GPITK-PKKVSGLDGVSIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDL----EESTF 758
Query: 219 GFLRSTSEY 227
LRS E+
Sbjct: 759 SHLRSFLEH 767
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+GV ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGVSIQQISAGTSHS 730
>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4588
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 156/319 (48%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + + P + SAF+ + + L +CG H++ LTETG V++ G DF
Sbjct: 3736 GEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDF 3795
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ ++VVQ++ G+ HS+ +T DG+L+ +G +G+LG
Sbjct: 3796 GKLGHGNN-ERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQRS 3854
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
+ K+ P +V L G Q + G ++ ++ G V ++G G G+LG G
Sbjct: 3855 TSNKMQP--ERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGS----- 3907
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV----DKMLFQE 274
ST++Y P+ +++L +K G S + +G VY FG + D ML
Sbjct: 3908 ----STAKYYPQKVEQLCNKGMKKVCCGAQFSVVLATDGHVYTFGQERLIGLPDSMLKNR 3963
Query: 275 GNHARRPSL------------------ISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
N PSL S G++Y WG N G LG+G +++ P +
Sbjct: 3964 SNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDIYAWGCNSEGQLGLGHCNLVKEPTLITA 4023
Query: 317 PFSESPVDQVSCGWKHTAA 335
+ Q+S G H++A
Sbjct: 4024 -LQGKNIKQISAGRCHSSA 4041
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 161/364 (44%), Gaps = 68/364 (18%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHS--LKALACGGA--HTLFLTETGCVYATGLND 99
G G YGRLGLG ++ P E H K + G+ HTL +T G V++ G +
Sbjct: 394 GKGSYGRLGLGDSNNQSMPKKL-VLEPHRNIKKVFSSKGSDGHTLAITVDGEVFSWGDGE 452
Query: 100 FGQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+G+LG N P + G K VV S GY HS+A+T DGELY WG+ G+LG
Sbjct: 453 YGKLG-HGNSATQKYPKIVQGPLFSKIVVSASAGYRHSAAVTNDGELYTWGEGDFGRLGH 511
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESS 216
++ PT V+ +SG+ Q A G ++AV G+ + S+G G +G+LGHG +
Sbjct: 512 SDSQSR--NTPTLVKDISGV--GQVACGSSHTIAVAQDGRTMWSFGGGDNGKLGHGDTNR 567
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ Y P++I+ L G ++ AG S
Sbjct: 568 V---------YRPKVIEALHGFIIRKVCAGSQSSL------------------------- 593
Query: 277 HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 336
+L S G+++ WG CLG GS + R S + + +SCG H A+
Sbjct: 594 -----ALTSAGQVFAWGC--GSCLGCGSSETTSLRPRFVEDLSITKIIDISCGDSHCLAL 646
Query: 337 S-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI-HPTIVNFGENVKALQVSCGFN 394
S E ++ W G+++ GQ G G+ I P V E V Q++ G +
Sbjct: 647 SHENEVYAW------------GNNTMGQCGQGHTSTPITRPKKVLGLEGVSIQQITAGTS 694
Query: 395 HTGA 398
H+ A
Sbjct: 695 HSLA 698
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 121/248 (48%), Gaps = 18/248 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD+G+LG G+ E + RP A + + LACG H+ +T G ++ G + G+
Sbjct: 3790 WGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGR 3849
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKK 160
LG + ++P R++ L+ V Q+S G +H+ +++DG ++ +G G+LG G
Sbjct: 3850 LG-QRSTSNKMQPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSS 3908
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KVE L K+ G + SV + G V ++G + ++G
Sbjct: 3909 TAKY--YPQKVEQLCNKGMKKVCCGAQFSVVLATDGHVYTFG-----------QERLIGL 3955
Query: 221 LRST--SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S + P+++ LEG+ ++ A G H + G +Y +G + ++ N
Sbjct: 3956 PDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDIYAWGCNSEGQLGLGHCNLV 4015
Query: 279 RRPSLISG 286
+ P+LI+
Sbjct: 4016 KEPTLITA 4023
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 110/230 (47%), Gaps = 22/230 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCS--AFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+G+YG+LG G+ ++ P + F K + A A G H+ +T G +Y G DF
Sbjct: 448 WGDGEYGKLGHGNSATQKYPKIVQGPLFSKIVVSASA-GYRHSAAVTNDGELYTWGEGDF 506
Query: 101 GQLGISENIGYSLEPL--RISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGL 157
G+LG S++ + L ISG V Q++ G H+ A+ DG ++ +G NG+LG
Sbjct: 507 GRLGHSDSQSRNTPTLVKDISG----VGQVACGSSHTIAVAQDGRTMWSFGGGDNGKLGH 562
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P +E L G ++ G + S+A+T G+V +WG G LG G
Sbjct: 563 GD--TNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSC--LGCGSS--- 615
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
T+ PR +++L K+ + G H + VY +G+ +
Sbjct: 616 -----ETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTM 660
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 126/293 (43%), Gaps = 64/293 (21%)
Query: 92 VYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
VY G N QL G E I L P G + I G + + +++ DG + GK
Sbjct: 340 VYVWGSNSSHQLAEGTLEKI---LLPKLTQGFS-DAQTIEAGQYCTFSVSTDGSVKACGK 395
Query: 150 NSNGQLGLGKKAAKVIPIPTKVEC---LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
S G+LGLG + +P +E + +F+ + + G ++A+T G+V SWG G
Sbjct: 396 GSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSDG--HTLAITVDGEVFSWGDGEY 453
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDENGRVYIFGDR 265
G+LGHG S ++ P++++ K+ + A+AG+ HSA + +
Sbjct: 454 GKLGHGN---------SATQKYPKIVQGPLFSKIVVSASAGYRHSAAVTND--------- 495
Query: 266 AVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 325
GELYTWG + G LG ++P V+ S V Q
Sbjct: 496 ---------------------GELYTWGEGDFGRLGHSDSQSRNTPTLVK---DISGVGQ 531
Query: 326 VSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
V+CG HT A+++ W +GG G+LGHG+ P ++
Sbjct: 532 VACGSSHTIAVAQDGRTMWSFGG----------GDNGKLGHGDTNRVYRPKVI 574
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 113/260 (43%), Gaps = 57/260 (21%)
Query: 142 GELYMWGKNSNGQL-GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
++Y+WG GQL G G + +PT CLS T+Q G S + G V++
Sbjct: 3681 SDVYLWGNGRYGQLAGTGTN----LTLPTLAPCLSQ--TQQVVCGQNCSFLIQSNGAVMA 3734
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
G G GRLG G + + P +I +G Y
Sbjct: 3735 VGEGQYGRLGQGNSDDL---------FVPTIISAFQG----------------------Y 3763
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
+ V +++ G+ +L GE+++WG + G LG G+ + P++++ E
Sbjct: 3764 V-----VTQLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGHGNNERQRRPKQIEALQGE 3818
Query: 321 SPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
V Q++CG++H+A ++ +GK+ T+G G S G+LG + + + P V
Sbjct: 3819 DVV-QLACGFRHSAVVTADGKLFTFGSGES------------GRLGQRSTSNKMQPERVA 3865
Query: 380 FGENVKALQVSCGFNHTGAL 399
E QVSCG NHT L
Sbjct: 3866 ALEGYHVGQVSCGLNHTLVL 3885
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 116/266 (43%), Gaps = 59/266 (22%)
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
A+TV Y+WG NS+ QL G + I +P + S T +A G + +V+ G
Sbjct: 337 AVTV----YVWGSNSSHQLAEG--TLEKILLPKLTQGFSDAQTIEA--GQYCTFSVSTDG 388
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
V + G G GRLG G S ++ P+
Sbjct: 389 SVKACGKGSYGRLGLGD---------SNNQSMPK-------------------------- 413
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
++ + R + K+ +G+ ++ GE+++WG E G LG G+ P+ VQG
Sbjct: 414 -KLVLEPHRNIKKVFSSKGSDGHTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIVQG 472
Query: 317 PFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
P V S G++H+AA++ +G++ TWG G F G+LGH + P
Sbjct: 473 PLFSKIVVSASAGYRHSAAVTNDGELYTWG----EGDF--------GRLGHSDSQSRNTP 520
Query: 376 TIVNFGENVKALQVSCGFNHTGALLE 401
T+V V QV+CG +HT A+ +
Sbjct: 521 TLVKDISGVG--QVACGSSHTIAVAQ 544
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 83/184 (45%), Gaps = 7/184 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G +RP V A ++ + G +L LT G V+A G
Sbjct: 552 FGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLG 611
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G SE SL P + L +++ IS G H A++ + E+Y WG N+ GQ G G +
Sbjct: 612 CGSSETT--SLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTS 669
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSV---AVTGGGKVLSWGAGGSGRLGHGQESSIL 218
I P KV L G+ +Q G S+ AV ++++W L + +
Sbjct: 670 TP-ITRPKKVLGLEGVSIQQITAGTSHSLAWTAVPTDRQLVAWHRPFCVDLEESTFTYLC 728
Query: 219 GFLR 222
FL+
Sbjct: 729 NFLK 732
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG +SR P + + +ACG +HT+ + + G +++ G D G
Sbjct: 501 WGEGDFGRLGHSDSQSRNTPTLVKDIS--GVGQVACGSSHTIAVAQDGRTMWSFGGGDNG 558
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + P I L ++ ++ G S A+T G+++ WG S LG G
Sbjct: 559 KLGHGDT-NRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSC--LGCGSS 615
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P VE LS + G +A++ +V +WG G+ G G S+ +
Sbjct: 616 ETTSLR-PRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPIT- 673
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
P+ + LEGV ++ AG HS
Sbjct: 674 -------RPKKVLGLEGVSIQQITAGTSHS 696
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 56 LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEP 115
L++R P V + E ++ +A G H L L+ TG +YA G N GQLG+ + EP
Sbjct: 3960 LKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDIYAWGCNSEGQLGLG-HCNLVKEP 4018
Query: 116 LRISGLK-KEVVQISTGYHHSSAIT 139
I+ L+ K + QIS G HSSA T
Sbjct: 4019 TLITALQGKNIKQISAGRCHSSAWT 4043
>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Ailuropoda melanoleuca]
Length = 1129
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 160/342 (46%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 103 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 159
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 160 LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 218
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 219 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 270
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AAG HS + +G V FG WG N G
Sbjct: 271 LAQVAAGGAHSFALSLSGAV--FG----------------------------WGMNNAGQ 300
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ + SP V+ ++ V +SCG +HTA +++ G + T+G G
Sbjct: 301 LGLSDEEDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG----------- 348
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT A +
Sbjct: 349 -SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 389
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 121/308 (39%), Gaps = 49/308 (15%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
R++ L V Q + +S + + WG S GQ G+ ++ P +S
Sbjct: 53 RVTCLGDSVAQWIRLWTLASGLDSIRTMLCWGYWSLGQPGISTNLQGIVAEPQVCGFISD 112
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
K+ A G SV + G+V + G G+LGH +E + P I L
Sbjct: 113 RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN-----------KPEQIGALA 161
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFG-------------DRAVDKMLFQEGNHA----- 278
+ A G HS + + G+++ +G D L Q+ N
Sbjct: 162 DQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 221
Query: 279 -----RRPSLISGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKH 332
+L + G+ +TWG N +G LG+G SP+RV+ P+ QV+ G H
Sbjct: 222 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAH 280
Query: 333 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 391
+ A+S G + W G ++ GQLG ++ D P V K + +SC
Sbjct: 281 SFALSLSGAVFGW------------GMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISC 328
Query: 392 GFNHTGAL 399
G HT L
Sbjct: 329 GEEHTAVL 336
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL E R P + ++CG HT LT++G V+ G GQ
Sbjct: 293 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 352
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 353 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 411
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 412 CNVKCPSPVK 421
>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
Length = 423
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 169/381 (44%), Gaps = 79/381 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRP------VVCSAFEKH-------SLKALACGGAHTLFLTET 89
+G D G+LG G+ + RP V S F K + A++CG HT+ LT +
Sbjct: 15 FGCNDDGQLGTGA---KRRPTLAIDDVSASNFPKQLGGLLGEEIVAVSCGSRHTMALTAS 71
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE---VVQISTGYHHSSAITVDGELYM 146
G VY+ G GQLG + ++ P +I+ ++E V +S G HS+A+T DG LYM
Sbjct: 72 GAVYSWGWGSMGQLGHGDLKSINV-PQKIAFFEQEGLKVDYVSCGGCHSAAVTNDGTLYM 130
Query: 147 WGKNSNGQLGLGKK-AAKVIPIPTKVECLSGIFTK---QAALGFEQSVAVTGGGKVLSWG 202
WG+ GQLGL K+ A P K L G+ + + + G + A+T G+V WG
Sbjct: 131 WGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNLGRVYVWG 190
Query: 203 AGGSGRLGHG-------QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G SG+LG G ++ +LG R P L++ G KV A G HSA + E
Sbjct: 191 RGDSGQLGIGSAWLKDTDDNGLLGVSR------PHLVEGFNGEKVVQVACGAFHSAAVTE 244
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G VYI WG + G LG+G +P+RV+
Sbjct: 245 QGHVYI------------------------------WGKEDYGMLGVGQTSDQQTPKRVE 274
Query: 316 GPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
F + P +VSCG HT +++ G G G+LG G+ P
Sbjct: 275 F-FDDIPALRVSCGGWHTMVVAKS-----------GDCYAFGRGEYGRLGLGDTKSRTRP 322
Query: 376 TIVNFGENVKALQVSCGFNHT 396
+V + +Q +CG +HT
Sbjct: 323 HLVKALKGQTVIQAACGGSHT 343
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 140/314 (44%), Gaps = 63/314 (20%)
Query: 42 LWGNGDYGRLGLG-SLESRWR--PVVCSAFE---KHSLKALACGGAHTLFLTETGCVYAT 95
+WG +G+LGL E+ PV C E S+ ++CGG HT LT G VY
Sbjct: 130 MWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNLGRVYVW 189
Query: 96 GLNDFGQLGI--------SEN--IGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGEL 144
G D GQLGI +N +G S P + G E VVQ++ G HS+A+T G +
Sbjct: 190 GRGDSGQLGIGSAWLKDTDDNGLLGVS-RPHLVEGFNGEKVVQVACGAFHSAAVTEQGHV 248
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
Y+WGK G LG+G+ + + P +VE I + + G ++ V G ++G G
Sbjct: 249 YIWGKEDYGMLGVGQTSDQ--QTPKRVEFFDDIPALRVSCGGWHTMVVAKSGDCYAFGRG 306
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
GRLG G + S P L+K L+G V AA G H+ + +G Y+ G
Sbjct: 307 EYGRLGLGD---------TKSRTRPHLVKALKGQTVIQAACGGSHTLFVTSDGIAYVAG- 356
Query: 265 RAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ-GPFSESPV 323
RP ++G LG+ + L P R+ GP PV
Sbjct: 357 ---------------RP--------------DHGRLGMTDMKPLSVPTRLDLGPI---PV 384
Query: 324 DQVSCGWKHTAAIS 337
QVS G H+ A++
Sbjct: 385 RQVSAGGAHSMALT 398
>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
Length = 4856
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 160/322 (49%), Gaps = 46/322 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4047 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4106
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4107 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4165
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4166 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4218
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4219 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4274
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV-- 314
R +L S G++Y WGSN G LG+G + + P V
Sbjct: 4275 NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4334
Query: 315 -QGPFSESPVDQVSCGWKHTAA 335
QG V Q+S G H+AA
Sbjct: 4335 LQG----KNVRQISAGRCHSAA 4352
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 127/245 (51%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4101 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4160
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4161 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4219
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4220 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4269
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4270 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4328
Query: 281 PSLIS 285
P+L++
Sbjct: 4329 PTLVT 4333
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 138/321 (42%), Gaps = 60/321 (18%)
Query: 83 TLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
T ++ET VY G N QL G E I L+P +++ + I G + + I+
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVIST 420
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVL 199
DG + GK S G+LGLG + E I ++ G + ++A T G+V
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 481 SWGDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG- 530
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
ELYTWG + G LG G + + P V+
Sbjct: 531 -----------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK--- 558
Query: 319 SESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 559 DISNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVI 608
Query: 379 NFGENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 609 EALQGMFIRKVCAGSQSSLAL 629
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4026 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4083
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4084 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4134
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4135 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4164
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4165 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4213
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4214 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4249
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|159486867|ref|XP_001701458.1| predicted protein [Chlamydomonas reinhardtii]
gi|158271640|gb|EDO97455.1| predicted protein [Chlamydomonas reinhardtii]
Length = 591
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 170/403 (42%), Gaps = 98/403 (24%)
Query: 38 RFAALWGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R +GN D+GRLGLG +L S P V A ++ L+ LA GGAHT+ +T G V+
Sbjct: 3 RLLVAFGNADHGRLGLGATTLSSVMTPRVNLALARYDLENLAAGGAHTVVVTRGGLVFTF 62
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
GLN GQLG S + EP + L + V ++ G H++ +T G +Y +G N++GQL
Sbjct: 63 GLNTRGQLGHSAEADSAAEPGNVL-LPEPVAAVAAGDAHTACLTESGRVYTFGCNASGQL 121
Query: 156 GLGKKAAKVIP-------IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
G+G+ A IP P VE L+G A G S+AVT G++ +WG G GR
Sbjct: 122 GVGRDA---IPGGRSHSARPMLVEALTGQRVVSVAAGAAHSLAVTDSGRLYAWGLGDHGR 178
Query: 209 LGHGQESSILGFLRSTS------------------------------EYTPRLI--KELE 236
LG G S S+ E+ PR + L
Sbjct: 179 LGLGPPPSAASSSNSSCGSDGSSDSSSDRTSSSSSCSEGGGARSPWVEWLPRAVTTAALG 238
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFG-----------------------DRAVDKMLFQ 273
G K AG SAC+DE GRVY +G D + L
Sbjct: 239 GSKPAEVFAGPATSACMDEAGRVYTWGFGALHQLGHGAGAAAGGGGRATPDDEWEPRLVD 298
Query: 274 EGNHARRPSLISGG----------ELYTWGSNENGCLGIGSIDVLHSP----ERVQGPFS 319
+ R L GG ++ WGS+ + GIGS+ ++ GP
Sbjct: 299 VSSLRRTRRLALGGAHALACRTDERVHVWGSDPS---GIGSLGMMPGSGLGLGPAPGPLP 355
Query: 320 ESPV------------DQVSCGWKHTAAI-SEGKILTWGWGGS 349
S V V+ G H+A + S+GK+ WGWGG+
Sbjct: 356 GSAVVIPAPTIFRWWFTDVAAGLAHSAGVSSDGKLFAWGWGGA 398
>gi|326432295|gb|EGD77865.1| ITCH protein [Salpingoeca sp. ATCC 50818]
Length = 1207
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 176/390 (45%), Gaps = 51/390 (13%)
Query: 41 ALWGNGDYGRLGLGSLES--RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
A+WG G+LG+G + + R + + E+ L +A G H+L +T +G VY TG N
Sbjct: 4 AVWGATGAGQLGIGDADGTGKTRVTLVPSLEQE-LAFVATGYYHSLAITRSGTVYTTGKN 62
Query: 99 DFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
D QLG S G + R++ L+ V + G S + G++Y WG GQLGL
Sbjct: 63 DRRQLGRS---GDEHKWARVTPLETITAVAGAVGLDFSVVVDSTGKVYTWGGGERGQLGL 119
Query: 158 GKKAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G++A + +P V+ L F A G +A+T G+V SWG G G+LG GQ
Sbjct: 120 GREAMETGSRVPRPVKGLGNAFVISVACGTRHCLALTRDGRVFSWGEGADGQLGDGQ--- 176
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S ++P +I +L G V AAG +S + +VY FG + ++ +
Sbjct: 177 ------FVSRHSPEVIADLRGKGVVSVAAGSTYSLAVTGADQVYAFGSNSKGQLGVGDTT 230
Query: 277 HARRPSLI----------------------SGGELYTWGSNENGCLGIGS-IDVLHSPER 313
RP+L+ G LY WGSN+ G LG+GS D + +P
Sbjct: 231 ARFRPTLVRFLDGKQVCHVTAGDFHTLARTRTGHLYAWGSNQWGQLGLGSEADSVAAPTE 290
Query: 314 VQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED-GHSSGGQLGHGND--- 369
+ V +VS G +HT A+ I T G+ T + G ++ GQLG D
Sbjct: 291 ITHILEIGRVLEVSAGRRHTVAL----IRTVTETGAQATVAVAFGANNTGQLGLDPDHPA 346
Query: 370 ---VDYIHPTIVNFGENVKALQVSCGFNHT 396
HP + ++ +++ G NHT
Sbjct: 347 SKRTQLFHPVRLKRISSMHPIKLIAGGNHT 376
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 149/334 (44%), Gaps = 59/334 (17%)
Query: 101 GQLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG- 158
GQLGI + G + L++E+ ++TGY+HS AIT G +Y GKN QLG
Sbjct: 12 GQLGIGDADGTGKTRVTLVPSLEQELAFVATGYYHSLAITRSGTVYTTGKNDRRQLGRSG 71
Query: 159 --KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
K A+V P+ T + ++G A+G + SV V GKV +WG G G+LG G+E+
Sbjct: 72 DEHKWARVTPLET-ITAVAG------AVGLDFSVVVDSTGKVYTWGGGERGQLGLGREAM 124
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
T PR +K L V A G H + +GRV+ +G+ A ++ +G
Sbjct: 125 ------ETGSRVPRPVKGLGNAFVISVACGTRHCLALTRDGRVFSWGEGADGQL--GDGQ 176
Query: 277 HARR--PSLIS----------------------GGELYTWGSNENGCLGIGSIDVLHSPE 312
R P +I+ ++Y +GSN G LG+G P
Sbjct: 177 FVSRHSPEVIADLRGKGVVSVAAGSTYSLAVTGADQVYAFGSNSKGQLGVGDTTARFRPT 236
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
V+ V V+ G HT A + G + W G + GQLG G++ D
Sbjct: 237 LVRF-LDGKQVCHVTAGDFHTLARTRTGHLYAW------------GSNQWGQLGLGSEAD 283
Query: 372 YI-HPT-IVNFGENVKALQVSCGFNHTGALLEYV 403
+ PT I + E + L+VS G HT AL+ V
Sbjct: 284 SVAAPTEITHILEIGRVLEVSAGRRHTVALIRTV 317
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 112/256 (43%), Gaps = 25/256 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG G SR P V + + ++A G ++L +T VYA G N GQ
Sbjct: 164 WGEGADGQLGDGQFVSRHSPEVIADLRGKGVVSVAAGSTYSLAVTGADQVYAFGSNSKGQ 223
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + P + L K+V ++ G H+ A T G LY WG N GQLGLG +A
Sbjct: 224 LGVGDTTA-RFRPTLVRFLDGKQVCHVTAGDFHTLARTRTGHLYAWGSNQWGQLGLGSEA 282
Query: 162 AKVIPIPTKV-------ECLSGIFTKQAALGFEQSVAVTGGGKV--LSWGAGGSGRLGHG 212
V PT++ L ++ + ++V TG +++GA +G+LG
Sbjct: 283 DSVA-APTEITHILEIGRVLEVSAGRRHTVALIRTVTETGAQATVAVAFGANNTGQLGLD 341
Query: 213 QESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
+ + T + P +K + + +K+ A G N + IFG++
Sbjct: 342 PDHPA---SKRTQLFHPVRLKRISSMHPIKLIAGG---------NHTIMIFGEQHTPMDT 389
Query: 272 FQEGNHARRPSLISGG 287
++ P LI G
Sbjct: 390 SEDAAIDGTPPLIEDG 405
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 104/268 (38%), Gaps = 79/268 (29%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V WGA G+G+LG G G ++ P L +EL V A G+ HS I +G
Sbjct: 3 VAVWGATGAGQLGIGDAD---GTGKTRVTLVPSLEQELAFV-----ATGYYHSLAITRSG 54
Query: 258 RVYIFG--DRAVDKMLFQEGNH---ARRPSL------------------ISGGELYTWGS 294
VY G DR + L + G+ AR L S G++YTWG
Sbjct: 55 TVYTTGKNDR---RQLGRSGDEHKWARVTPLETITAVAGAVGLDFSVVVDSTGKVYTWGG 111
Query: 295 NENGCLGIGSIDVLHSPERVQGPFS---ESPVDQVSCGWKHTAAIS-EGKILTWGWGGS- 349
E G LG+G + + + RV P + V V+CG +H A++ +G++ +WG G
Sbjct: 112 GERGQLGLGR-EAMETGSRVPRPVKGLGNAFVISVACGTRHCLALTRDGRVFSWGEGADG 170
Query: 350 ---HGTFSED------------------------------------GHSSGGQLGHGNDV 370
G F G +S GQLG G+
Sbjct: 171 QLGDGQFVSRHSPEVIADLRGKGVVSVAAGSTYSLAVTGADQVYAFGSNSKGQLGVGDTT 230
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHTGA 398
PT+V F + + V+ G HT A
Sbjct: 231 ARFRPTLVRFLDGKQVCHVTAGDFHTLA 258
>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 [Felis catus]
Length = 4861
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 160/322 (49%), Gaps = 46/322 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4112 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4224 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV-- 314
R +L S G++Y WGSN G LG+G + + P V
Sbjct: 4280 NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4339
Query: 315 -QGPFSESPVDQVSCGWKHTAA 335
QG V Q+S G H+AA
Sbjct: 4340 LQG----KNVRQISAGRCHSAA 4357
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 127/245 (51%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLIS 285
P+L++
Sbjct: 4334 PTLVT 4338
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++++ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 138/321 (42%), Gaps = 60/321 (18%)
Query: 83 TLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
T ++ET VY G N QL G E I L+P +++ + I G + + I+
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVIST 420
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVL 199
DG + GK S G+LGLG + E I ++ G + ++A T G+V
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 481 SWGDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG- 530
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
ELYTWG + G LG G + + P V+
Sbjct: 531 -----------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK--- 558
Query: 319 SESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
S V +VSCG HT A+S+ W +GG G+LGHG+ P +V
Sbjct: 559 DISNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVV 608
Query: 379 NFGENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 609 EALQGMFIRKVCAGSQSSLAL 629
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P VE L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4088
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4139
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4140 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4169
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4170 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4218
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4219 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4254
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P + L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
Length = 4859
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 160/322 (49%), Gaps = 46/322 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4110 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4168
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4169 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4221
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4222 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV-- 314
R +L S G++Y WGSN G LG+G + + P V
Sbjct: 4278 NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4337
Query: 315 -QGPFSESPVDQVSCGWKHTAA 335
QG V Q+S G H+AA
Sbjct: 4338 LQG----KNVRQISAGRCHSAA 4355
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 127/245 (51%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4104 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4163
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4164 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4223 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4272
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4273 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4331
Query: 281 PSLIS 285
P+L++
Sbjct: 4332 PTLVT 4336
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4086
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4087 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4137
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4138 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4167
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4168 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4216
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4217 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4252
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
Length = 4850
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 160/322 (49%), Gaps = 46/322 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4041 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4100
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4101 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4159
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4160 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4212
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4213 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4268
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV-- 314
R +L S G++Y WGSN G LG+G + + P V
Sbjct: 4269 NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4328
Query: 315 -QGPFSESPVDQVSCGWKHTAA 335
QG V Q+S G H+AA
Sbjct: 4329 LQG----KNVRQISAGRCHSAA 4346
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 127/245 (51%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4095 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4154
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4155 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4213
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4214 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4263
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4264 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4322
Query: 281 PSLIS 285
P+L++
Sbjct: 4323 PTLVT 4327
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4020 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4077
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4078 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4128
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4129 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4158
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4159 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4207
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4208 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4243
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Sus scrofa]
Length = 2561
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 158/319 (49%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 1663 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 1722
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 1723 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 1781
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 1782 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 1834
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 1835 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 1890
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R +L S G++Y WGSN G LG+G + + P V
Sbjct: 1891 NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 1950
Query: 317 PFSESPVDQVSCGWKHTAA 335
V Q+S G H+AA
Sbjct: 1951 -LQGKNVRQISAGRCHSAA 1968
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 127/245 (51%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 1717 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 1776
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 1777 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 1835
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 1836 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 1885
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 1886 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 1944
Query: 281 PSLIS 285
P+L++
Sbjct: 1945 PTLVT 1949
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 1642 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 1699
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 1700 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 1750
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 1751 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 1780
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 1781 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 1829
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 1830 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 1865
>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
Length = 4871
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 160/322 (49%), Gaps = 46/322 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4061 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4120
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4121 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4179
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4180 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4232
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4233 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4288
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV-- 314
R +L S G++Y WGSN G LG+G + + P V
Sbjct: 4289 NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4348
Query: 315 -QGPFSESPVDQVSCGWKHTAA 335
QG V Q+S G H+AA
Sbjct: 4349 LQG----KNVRQISAGRCHSAA 4366
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 127/245 (51%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4115 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4174
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4175 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4233
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4234 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4283
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4284 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4342
Query: 281 PSLIS 285
P+L++
Sbjct: 4343 PTLVT 4347
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++++ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P +V
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVVEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P VE L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4040 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4097
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4098 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4148
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4149 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4178
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4179 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4227
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4228 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4263
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P + L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
familiaris]
Length = 1050
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 160/342 (46%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AAG HS + +G V FG WG N G
Sbjct: 192 LAQVAAGGAHSFALSLSGAV--FG----------------------------WGMNNAGQ 221
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ + SP V+ ++ V +SCG +HTA +++ G + T+G G
Sbjct: 222 LGLSDEEDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG----------- 269
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT A +
Sbjct: 270 -SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL E R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Ailuropoda melanoleuca]
Length = 4861
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 160/322 (49%), Gaps = 46/322 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4112 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4224 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV-- 314
R +L S G++Y WGSN G LG+G + + P V
Sbjct: 4280 NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4339
Query: 315 -QGPFSESPVDQVSCGWKHTAA 335
QG V Q+S G H+AA
Sbjct: 4340 LQG----KNVRQISAGRCHSAA 4357
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 127/245 (51%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLIS 285
P+L++
Sbjct: 4334 PTLVT 4338
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++++ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P +V
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVVEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P VE L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4088
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4139
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4140 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4169
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4170 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4218
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4219 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4254
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P + L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|297807279|ref|XP_002871523.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297317360|gb|EFH47782.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 1075
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 168/372 (45%), Gaps = 70/372 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GRLG G + +P + A +++ +ACG H+ +T +G +Y G DFG
Sbjct: 332 WGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGV 391
Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P R++ L + V I+ G +H++ +T G+L+ +G + G LG G K
Sbjct: 392 LGHGNEVSHWV-PKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDK 450
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGSGR 208
K + IP +V+ L G+ T +AA G + AV GK+ +WG G GR
Sbjct: 451 --KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGR 508
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + P+L+ V+ F AC
Sbjct: 509 LGHGNKE-------------PKLVPTCVAALVE---PNFCQVAC---------------- 536
Query: 269 KMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 328
H+ +L + G +YT GS G LG D P RV+G +S V++++C
Sbjct: 537 -------GHSLTVALTTSGHVYTMGSPVYGQLGNSHADG-KLPNRVEGKLHKSFVEEIAC 588
Query: 329 GWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 387
G H A + S ++ TWG G S G+LGHG+ D PT+V ++ +
Sbjct: 589 GAYHVAVLTSRTEVYTWGKG------------SNGRLGHGDVDDRNSPTLVESLKDKQVK 636
Query: 388 QVSCGFNHTGAL 399
++CG N T A+
Sbjct: 637 SIACGTNFTAAV 648
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 83/164 (50%), Gaps = 10/164 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G+ E + P +A + + +ACG + T+ LT +G VY G +GQ
Sbjct: 501 WGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 560
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG S G P R+ G K V +I+ G +H + +T E+Y WGK SNG+LG G
Sbjct: 561 LGNSHADGKL--PNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDV 618
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ PT VE L K A G + AV + W +G
Sbjct: 619 DDRN--SPTLVESLKDKQVKSIACGTNFTAAVC----IHRWASG 656
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 104/239 (43%), Gaps = 54/239 (22%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G + +V VT G+ SWG GRLGHG +S+I
Sbjct: 298 LPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNI--------- 348
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
P+LI L +++ A G HS +
Sbjct: 349 QQPKLIDALNTTNIELVACGEFHSCAV------------------------------TLS 378
Query: 287 GELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTW 344
G+LYTWG + G LG G+ +V H P+RV V ++CG HTA + S G++ T+
Sbjct: 379 GDLYTWGKGDFGVLGHGN-EVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTF 437
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
G GTF G LGHG+ P V+ + ++ ++ +CG HT A++E +
Sbjct: 438 G----DGTF--------GVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVM 484
>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
garnettii]
Length = 4828
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 160/322 (49%), Gaps = 46/322 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4019 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4078
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4079 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4137
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4138 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4190
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4191 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4246
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV-- 314
R +L S G++Y WGSN G LG+G + + P V
Sbjct: 4247 NRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4306
Query: 315 -QGPFSESPVDQVSCGWKHTAA 335
QG + Q+S G H+AA
Sbjct: 4307 LQG----KNIRQISAGRCHSAA 4324
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 128/245 (52%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4073 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4132
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4133 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4191
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4192 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4241
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4242 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4300
Query: 281 PSLIS 285
P+L++
Sbjct: 4301 PTLVT 4305
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 3998 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4055
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4056 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4106
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4107 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4136
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4137 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4185
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4186 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4221
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Takifugu rubripes]
Length = 1031
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 163/360 (45%), Gaps = 58/360 (16%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G+LG+G + P C+ F LK + CGG H++FL G VY G N G
Sbjct: 4 WGKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNSCG 63
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG ++ + P + L +++ +S G HS A+ G+++ WG GQLGLG
Sbjct: 64 QLGHNKP---GITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTT 120
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
V IP ++ L Q G + +A++ G++ +WG SG+LG G+
Sbjct: 121 ETAV-RIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEP---- 175
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S+ P+ +K L G+ + AG G+H+
Sbjct: 176 ----SKLFPQPLKSLAGIPLAKITAG----------------------------GDHSFA 203
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EG 339
SL G ++ WG N+ G LG+ I P ++ S+ V +SCG +HTAA++ +G
Sbjct: 204 LSL--SGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVV-HISCGEEHTAALTKDG 260
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ T+G G S GQLGHG+ + + P V + Q++CG +HT A
Sbjct: 261 GLFTFGDG------------SWGQLGHGSTANELLPRRVLELMGTEVSQITCGRHHTLAF 308
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 67/136 (49%), Gaps = 3/136 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGL ++ R P + ++CG HT LT+ G ++ G +GQ
Sbjct: 213 WGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQ 272
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV-DGELYMWGKNSNGQLGLGKK 160
LG + L P R+ L EV QI+ G HH+ A G +Y +G NS+GQLG G
Sbjct: 273 LG-HGSTANELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGGVYAFGCNSHGQLGTGVL 331
Query: 161 AAKVIPIPTKVECLSG 176
+A P P K LSG
Sbjct: 332 SADKSPYPLKTSFLSG 347
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 100/264 (37%), Gaps = 70/264 (26%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG G+LG G E + + R+ + +T R +KE+ G HS + +G
Sbjct: 1 MLCWGKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEI--------VCGGQHSVFLLHDG 52
Query: 258 RVYIFGDR------------------AVD--KMLFQEGNHARRPSLISGGELYTWGSNEN 297
VY G A+D K+ A ++ G+++ WG+ E
Sbjct: 53 SVYTCGSNSCGQLGHNKPGITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEE 112
Query: 298 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGW---------- 346
G LG+G+ + R+ + + QV CG +H A+S +G++ TWG
Sbjct: 113 GQLGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGK 172
Query: 347 ------------------------GGSH-------GTFSEDGHSSGGQLGHGNDVDYIHP 375
GG H G G + GQLG + D P
Sbjct: 173 GEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVP 232
Query: 376 TIVNFGENVKALQVSCGFNHTGAL 399
+ F + K + +SCG HT AL
Sbjct: 233 CHIKFLRSQKVVHISCGEEHTAAL 256
>gi|350407907|ref|XP_003488238.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
impatiens]
Length = 539
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 143/308 (46%), Gaps = 46/308 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQ 102
GN YG LG G +S P A S+K A G G H L LTE G VY+ G ND+ +
Sbjct: 52 GNNTYGCLGTGDTQSTIYPKKIEALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCE 111
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG +++ L P + + K VV I+ G HHS A+T GE+Y WG N +GQ+G G
Sbjct: 112 LG-NKSTNEGLTPTLVPSVLDDKFVVDIACGGHHSLALTNKGEIYAWGHNVSGQVGCGTI 170
Query: 161 AAKVIPIPTKVEC-LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ V PIP + L+G + G SVAVT G+V SWG G G+LG G
Sbjct: 171 LSTVQPIPKLLNVGLNGKKVVHISCGDSSSVAVTDSGEVYSWGHNGVGQLGLG------- 223
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
TS+ P+ + + ++ G++H+ + + G
Sbjct: 224 --NCTSQVEPQKVATFAKIVIEKVVCGYMHTLALSDEGV--------------------- 260
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA-AISE 338
LY WG+N G LG+ + + P +++ P +D V+ + H + A+SE
Sbjct: 261 ---------LYVWGANSYGQLGLNTDSNVWIPTKLEVPEMGRILDIVTSHYHHISLAMSE 311
Query: 339 G-KILTWG 345
G +I WG
Sbjct: 312 GNRIFMWG 319
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 115/228 (50%), Gaps = 19/228 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG DY LG S P +V S + + +ACGG H+L LT G +YA G N G
Sbjct: 104 WGYNDYCELGNKSTNEGLTPTLVPSVLDDKFVVDIACGGHHSLALTNKGEIYAWGHNVSG 163
Query: 102 QLGISENIGYSLEP---LRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
Q+G I +++P L GL K+VV IS G S A+T GE+Y WG N GQLGL
Sbjct: 164 QVGCG-TILSTVQPIPKLLNVGLNGKKVVHISCGDSSSVAVTDSGEVYSWGHNGVGQLGL 222
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G ++V P KV + I ++ G+ ++A++ G + WGA G+LG +S++
Sbjct: 223 GNCTSQVEP--QKVATFAKIVIEKVVCGYMHTLALSDEGVLYVWGANSYGQLGLNTDSNV 280
Query: 218 LGFLRSTSEYTPRLIKELE-GVKVKIAAAGFLH-SACIDENGRVYIFG 263
+ P ++ E G + I + + H S + E R++++G
Sbjct: 281 ---------WIPTKLEVPEMGRILDIVTSHYHHISLAMSEGNRIFMWG 319
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 142/321 (44%), Gaps = 56/321 (17%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITV 140
TL +T+ VY G N +G LG + ++ P +I L K V + G H A+T
Sbjct: 39 TLLVTKDDMVYGIGNNTYGCLGTGDTQS-TIYPKKIEALCGKSVKTFAYGKGPHVLALTE 97
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVL 199
+G++Y WG N +LG K+ PT V L F A G S+A+T G++
Sbjct: 98 EGKVYSWGYNDYCELG--NKSTNEGLTPTLVPSVLDDKFVVDIACGGHHSLALTNKGEIY 155
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGR 258
+WG SG++G G + ST + P+L+ L G KV +H +C D
Sbjct: 156 AWGHNVSGQVG-------CGTILSTVQPIPKLLNVGLNGKKV-------VHISCGD---- 197
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
+ ++ GE+Y+WG N G LG+G+ P++V F
Sbjct: 198 -------------------SSSVAVTDSGEVYSWGHNGVGQLGLGNCTSQVEPQKV-ATF 237
Query: 319 SESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
++ +++V CG+ HT A+S+ +L + WG +S GQLG D + PT +
Sbjct: 238 AKIVIEKVVCGYMHTLALSDEGVL-YVWGA----------NSYGQLGLNTDSNVWIPTKL 286
Query: 379 NFGENVKALQVSCGFNHTGAL 399
E + L + H +L
Sbjct: 287 EVPEMGRILDIVTSHYHHISL 307
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 123/294 (41%), Gaps = 63/294 (21%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
LEP IS ++ +V + + +T D +Y G N+ G LG G + + P K+E
Sbjct: 18 LEPKFISNVRMAIVY-GKAANETLLVTKDDMVYGIGNNTYGCLGTGDTQSTIYP--KKIE 74
Query: 173 CLSGIFTKQAALGF-EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE-YTPR 230
L G K A G +A+T GKV SWG LG+ +ST+E TP
Sbjct: 75 ALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCELGN----------KSTNEGLTPT 124
Query: 231 LIKELEGVK--VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGE 288
L+ + K V IA G HS +L + GE
Sbjct: 125 LVPSVLDDKFVVDIACGGH-HSL------------------------------ALTNKGE 153
Query: 289 LYTWGSNENGCLGIGSI--DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 345
+Y WG N +G +G G+I V P+ + + V +SCG + A+++ G++ +WG
Sbjct: 154 IYAWGHNVSGQVGCGTILSTVQPIPKLLNVGLNGKKVVHISCGDSSSVAVTDSGEVYSWG 213
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
H+ GQLG GN + P V + +V CG+ HT AL
Sbjct: 214 ------------HNGVGQLGLGNCTSQVEPQKVATFAKIVIEKVVCGYMHTLAL 255
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 10/134 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LGLG+ S+ P + F K ++ + CG HTL L++ G +Y G N +GQ
Sbjct: 212 WGHNGVGQLGLGNCTSQVEPQKVATFAKIVIEKVVCGYMHTLALSDEGVLYVWGANSYGQ 271
Query: 103 LGISENIGYSLE-PLRISGLKKEVVQISTGYHHSS-AITVDGELYMWGKNSNGQLGLGKK 160
LG++ + + L + + + + +++ YHH S A++ ++MWG+ LG+
Sbjct: 272 LGLNTDSNVWIPTKLEVPEMGRILDIVTSHYHHISLAMSEGNRIFMWGQ------CLGQS 325
Query: 161 AAKVIPIPTKVECL 174
+P T ++CL
Sbjct: 326 IK--VPTLTPLKCL 337
>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
Length = 1050
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 160/342 (46%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AAG HS + +G V FG WG N G
Sbjct: 192 LAQVAAGGAHSFALSLSGAV--FG----------------------------WGMNNAGQ 221
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ + SP V+ ++ V +SCG +HTA +++ G + T+G G
Sbjct: 222 LGLSDEEDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG----------- 269
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT A +
Sbjct: 270 -SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL E R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
africana]
Length = 4858
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 160/322 (49%), Gaps = 46/322 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4049 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4108
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4109 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4167
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4168 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGN----- 4220
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4221 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4276
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV-- 314
R +L S G++Y WGSN G LG+G + + P V
Sbjct: 4277 NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4336
Query: 315 -QGPFSESPVDQVSCGWKHTAA 335
QG V Q+S G H+AA
Sbjct: 4337 LQG----KNVRQISAGRCHSAA 4354
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 127/245 (51%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4103 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4162
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4163 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGNS 4221
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4222 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4271
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4272 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4330
Query: 281 PSLIS 285
P+L++
Sbjct: 4331 PTLVT 4335
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S++ ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIRKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 LVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIRKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4028 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4085
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4086 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4136
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4137 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4166
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4167 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSSDGSMVWAFG--------DGDY--GK 4215
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4216 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4251
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
Length = 1050
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 171/362 (47%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG +G+ G+GS P V ++K +ACGG H++FL E G VY GLN
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 101 GQLGISENIGYSLEPL-RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E+ G EP+ ++G + +V ++ G HS A++ G+++ WG S+GQLGL
Sbjct: 64 GQLG-HESEGSKPEPIGALAG--QHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGL-T 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECP--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S+ +P+ +K L+G+ + AAG HS + +G V FG
Sbjct: 177 -----SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAV--FG---------------- 213
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE- 338
WG N +G LG+ SP V+ S+ V +SCG +HTA +++
Sbjct: 214 ------------WGKNSSGQLGLSDERDRESPCHVKLLRSQKVV-YISCGEEHTAVLTKS 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G G S GQLGH + D ++P V + Q++CG +HT A
Sbjct: 261 GGVFTFGAG------------SCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 147/333 (44%), Gaps = 58/333 (17%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
G+LG S S+ P+ A + +ACG +H++ L++ G V++ G GQLG++
Sbjct: 64 GQLGHESEGSKPEPI--GALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTI 121
Query: 109 IGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
P I L ++ ++QIS G H A+ DG+ + WG+NS GQLGLGK+
Sbjct: 122 EDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS- 180
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P +V+ L GI Q A G S A++ G V WG SG+LG E
Sbjct: 181 PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDER---------DRE 231
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
+P +K L KV + G H+A + ++G V
Sbjct: 232 SPCHVKLLRSQKVVYISCGEEHTAVLTKSGGV---------------------------- 263
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWG 345
+T+G+ G LG S++ +P RV S V Q++CG HT A S G I +G
Sbjct: 264 --FTFGAGSCGQLGHDSMNDEVNPRRVLE-LMGSEVSQIACGRHHTLAFVPSSGMIYAFG 320
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
G + GQLG G+ + P+ V
Sbjct: 321 CG------------TRGQLGTGHTCNVKCPSPV 341
>gi|340721971|ref|XP_003399386.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
terrestris]
Length = 539
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 142/308 (46%), Gaps = 46/308 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQ 102
GN YG LG G S P A S+K A G G H L LTE G VY+ G ND+ +
Sbjct: 52 GNNTYGCLGTGDTHSTIYPKKIEALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCE 111
Query: 103 LGISENIGYSLEPLRI-SGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + L P I S L E VV I+ G HHS A+T GE+Y WG N +GQ+G G
Sbjct: 112 LG-NRSTNEGLTPTLIPSALNNEFVVDIACGGHHSLALTNKGEVYAWGHNVSGQVGCGTI 170
Query: 161 AAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ V PIP + L+G + G SVAVT G+V SWG G G+LG G
Sbjct: 171 LSTVQPIPKLLHIVLNGKKVVHISCGDSSSVAVTDNGEVYSWGHNGVGQLGIG------- 223
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
TS+ P+ + + ++ G++H+ + +
Sbjct: 224 --NCTSQAEPQKVATFAKIVIEKVVCGYMHTLALSDE----------------------- 258
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA-AISE 338
G+LY WG+N G LG+ + + P ++Q P +D + + H + A+SE
Sbjct: 259 -------GDLYVWGANSYGQLGLNTDSNVWIPTKLQVPEMGRILDIATSHYHHISLAMSE 311
Query: 339 G-KILTWG 345
G +I WG
Sbjct: 312 GNRIFMWG 319
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 115/228 (50%), Gaps = 19/228 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG DY LG S P ++ SA + +ACGG H+L LT G VYA G N G
Sbjct: 104 WGYNDYCELGNRSTNEGLTPTLIPSALNNEFVVDIACGGHHSLALTNKGEVYAWGHNVSG 163
Query: 102 QLGISENIGYSLEP----LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
Q+G I +++P L I K+VV IS G S A+T +GE+Y WG N GQLG+
Sbjct: 164 QVGCG-TILSTVQPIPKLLHIVLNGKKVVHISCGDSSSVAVTDNGEVYSWGHNGVGQLGI 222
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G ++ P KV + I ++ G+ ++A++ G + WGA G+LG +S++
Sbjct: 223 GNCTSQAEP--QKVATFAKIVIEKVVCGYMHTLALSDEGDLYVWGANSYGQLGLNTDSNV 280
Query: 218 LGFLRSTSEYTPRLIKELE-GVKVKIAAAGFLH-SACIDENGRVYIFG 263
+ P ++ E G + IA + + H S + E R++++G
Sbjct: 281 ---------WIPTKLQVPEMGRILDIATSHYHHISLAMSEGNRIFMWG 319
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 120/293 (40%), Gaps = 61/293 (20%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
LEP IS ++ +V + + +T D +Y G N+ G LG G + + P K+E
Sbjct: 18 LEPKFISNVRMAIVY-GKAANETLIVTKDDMVYGIGNNTYGCLGTGDTHSTIYP--KKIE 74
Query: 173 CLSGIFTKQAALGF-EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE-YTPR 230
L G K A G +A+T GKV SWG LG+ RST+E TP
Sbjct: 75 ALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCELGN----------RSTNEGLTPT 124
Query: 231 LIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
LI L V A G HS +L + GE+
Sbjct: 125 LIPSALNNEFVVDIACGGHHSL------------------------------ALTNKGEV 154
Query: 290 YTWGSNENGCLGIGSI--DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGW 346
Y WG N +G +G G+I V P+ + + V +SCG + A+++ G++ +WG
Sbjct: 155 YAWGHNVSGQVGCGTILSTVQPIPKLLHIVLNGKKVVHISCGDSSSVAVTDNGEVYSWG- 213
Query: 347 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
H+ GQLG GN P V + +V CG+ HT AL
Sbjct: 214 -----------HNGVGQLGIGNCTSQAEPQKVATFAKIVIEKVVCGYMHTLAL 255
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 72/134 (53%), Gaps = 10/134 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG+G+ S+ P + F K ++ + CG HTL L++ G +Y G N +GQ
Sbjct: 212 WGHNGVGQLGIGNCTSQAEPQKVATFAKIVIEKVVCGYMHTLALSDEGDLYVWGANSYGQ 271
Query: 103 LGISENIGYSLE-PLRISGLKKEVVQISTGYHHSS-AITVDGELYMWGKNSNGQLGLGKK 160
LG++ + + L++ + + + ++ YHH S A++ ++MWG+ LG+
Sbjct: 272 LGLNTDSNVWIPTKLQVPEMGRILDIATSHYHHISLAMSEGNRIFMWGQ------CLGQS 325
Query: 161 AAKVIPIPTKVECL 174
+P T ++CL
Sbjct: 326 IK--VPTLTPLKCL 337
>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
Length = 1050
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 160/342 (46%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AAG HS + +G V FG WG N G
Sbjct: 192 LAQVAAGGAHSFALSLSGAV--FG----------------------------WGMNNAGQ 221
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ + SP V+ ++ V +SCG +HTA +++ G + T+G G
Sbjct: 222 LGLSDEEDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG----------- 269
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT A +
Sbjct: 270 -SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL E R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 isoform 1 [Canis lupus familiaris]
Length = 4861
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 160/322 (49%), Gaps = 46/322 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4112 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4224 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV-- 314
R +L S G++Y WGSN G LG+G + + P V
Sbjct: 4280 NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4339
Query: 315 -QGPFSESPVDQVSCGWKHTAA 335
QG + Q+S G H+AA
Sbjct: 4340 LQG----KNIRQISAGRCHSAA 4357
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 127/245 (51%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLIS 285
P+L++
Sbjct: 4334 PTLVT 4338
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++++ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KMALSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P +V
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVVEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4088
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4139
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4140 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4169
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4170 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4218
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4219 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4254
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 76/163 (46%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G A+ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P + L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A+ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
Length = 1504
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 168/375 (44%), Gaps = 65/375 (17%)
Query: 30 WISSTLQRRFAALWGNGDYGRLGLGSLES--RWRPVVCSAFEKHSLKALACGGAHTLFLT 87
WI + L WG G+ G+ S P VC S+K +ACGG H++FL
Sbjct: 451 WIRTML------CWGYWSLGQPGISSNLQGIVAEPQVCGFIADRSVKEVACGGNHSVFLL 504
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYM 146
E G VY GLN GQLG E G +P +I L + +V ++ G HS A++ G+L+
Sbjct: 505 EDGEVYTCGLNTKGQLG-HEREGN--KPEQIGALADQHIVHVACGESHSLALSDRGQLFS 561
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S+GQLGL V +P ++ L+ Q + G +A+ G+ +WG
Sbjct: 562 WGAGSDGQLGLMTTEDSVA-VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSH 620
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG G+E S+ +P+ ++ LEG+ + AAG HS + +G V FG
Sbjct: 621 GQLGLGKEFP--------SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAV--FG--- 667
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
WG N G LG+ SP V+ V +
Sbjct: 668 -------------------------WGMNNAGQLGLSDEKDRESPCHVKL-LRTQKVVYI 701
Query: 327 SCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 385
SCG +HTA +++ G + T+G G S GQLGH + D ++P V +
Sbjct: 702 SCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDSMNDEVNPRRVLELMGSE 749
Query: 386 ALQVSCGFNHTGALL 400
Q++CG HT A +
Sbjct: 750 VTQIACGRQHTLAFV 764
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 668 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 727
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 728 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 786
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 787 CNVKCPSPVK 796
>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
Length = 1057
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 165/364 (45%), Gaps = 60/364 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G LGLG +E P S++ ACG +HTL LT+ G +++ G ND
Sbjct: 6 WGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGNNDH 65
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + + P IS L+ +V +S G HS A+T G+++ WG NS GQLG
Sbjct: 66 GQLGHDTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNSIGQLG-HD 124
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P ++ ++ Q A G S+A+T G++ SWGA G G+LG G
Sbjct: 125 TDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQLGLG------- 177
Query: 220 FLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
+T E TP L+K L G+ + A G GNH
Sbjct: 178 ---TTGEKVVTPTLVKSLAGIPIAFIACG----------------------------GNH 206
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
+ S G ++ WG N G LG+ + P++++ V +SCG +A ++
Sbjct: 207 SFAVS--KSGAIFGWGKNTFGQLGLNDLVSRCFPQQLKT-LRNLGVRYISCGDDFSAFLT 263
Query: 338 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
EG + T G GTF GQLGHG + I P +V K Q++CG HT
Sbjct: 264 QEGGVFTCG----AGTF--------GQLGHGTCSNEILPRMVFELMGSKITQIACGRRHT 311
Query: 397 GALL 400
A +
Sbjct: 312 LAFV 315
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 138/303 (45%), Gaps = 47/303 (15%)
Query: 44 GNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
GN D+G+LG + L ++ RP S+ E + + ++CG H+L LT G V++ G N G
Sbjct: 61 GNNDHGQLGHDTDCLPNK-RPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNSIG 119
Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG ++ P I + K VVQI++G HS A+T GEL+ WG N GQLGLG
Sbjct: 120 QLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQLGLGTT 179
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
KV+ PT V+ L+GI A G S AV+ G + WG G+LG
Sbjct: 180 GEKVV-TPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLND------- 231
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S P+ +K L + V+ + G SA + + G V
Sbjct: 232 --LVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGV--------------------- 268
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SE 338
+T G+ G LG G+ P R+ S + Q++CG +HT A S
Sbjct: 269 ---------FTCGAGTFGQLGHGTCSNEILP-RMVFELMGSKITQIACGRRHTLAFVPSR 318
Query: 339 GKI 341
GKI
Sbjct: 319 GKI 321
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 122/283 (43%), Gaps = 46/283 (16%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG +G+LGLG + + +P +++ +QAA G ++ +T GK+ S G
Sbjct: 3 VYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGN 62
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH + P+ I LE V + G HS + G+V+ +G
Sbjct: 63 NDHGQLGHDTD--------CLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWG 114
Query: 264 DRAV----------------------DKMLFQEGN-HARRPSLISGGELYTWGSNENGCL 300
++ K + Q + +L + GEL++WG+N G L
Sbjct: 115 SNSIGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQL 174
Query: 301 GIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
G+G+ + + +P V+ + P+ ++CG H+ A+S+ G I WG TF
Sbjct: 175 GLGTTGEKVVTPTLVKS-LAGIPIAFIACGGNHSFAVSKSGAIFGWG----KNTF----- 224
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GQLG + V P + N+ +SCG + + L +
Sbjct: 225 ---GQLGLNDLVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQ 264
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL L SR P ++ ++CG + FLT+ G V+ G FGQ
Sbjct: 219 WGKNTFGQLGLNDLVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQ 278
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA-ITVDGELY 145
LG L + + ++ QI+ G H+ A + G++Y
Sbjct: 279 LGHGTCSNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIY 322
>gi|337751269|ref|YP_004645431.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
gi|336302458|gb|AEI45561.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
Length = 404
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 177/384 (46%), Gaps = 81/384 (21%)
Query: 33 STLQRRFAALW--GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
ST+ R +W G + G+LG G+ + E + + +L HTL +T+ G
Sbjct: 46 STILRSDGTVWTTGRNNVGQLGNGTEKDS--SYFGKVDELYDVVSLDSDMDHTLAITKHG 103
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
V+ G N G+ I+E P++I+GLK ++VQ+STG HS A+ G ++ WG+N
Sbjct: 104 TVWGWGYNSKGE--ITEGGKNIARPVQINGLK-DIVQVSTGLVHSLALDQSGAVWSWGEN 160
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
GQLG G IPTKVE LS I +A G E S+A++ GKV +WG G+LG
Sbjct: 161 IYGQLGNGTNQDS--SIPTKVEFLSNIVAIEA--GAEHSLALSNDGKVWAWGRNEFGQLG 216
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
+G+ + PRL+K LE +++ A G HS +D +G +
Sbjct: 217 NGE---------TEKSNIPRLVKNLE--NIEMIAGGDNHSLALDHDGAI----------- 254
Query: 271 LFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH------------SPERVQGPF 318
+ WG N NG +G GS +V P ++ G +
Sbjct: 255 -------------------WAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLY 295
Query: 319 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 377
+ V QVS G KH+ A++E G++ WGW + GQLG+G+ D P
Sbjct: 296 GK--VKQVSAGIKHSTALTENGEVYAWGW------------NEYGQLGNGSMKDSKVPLR 341
Query: 378 VNFGENVKALQVSCGFNHTGALLE 401
N G ++ + + G H+ A+ E
Sbjct: 342 NNVGRSI--IDIETGSYHSFAVDE 363
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 87/181 (48%), Gaps = 17/181 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG ++G+LG G E P + E +++ +A G H+L L G ++A G N GQ
Sbjct: 207 WGRNEFGQLGNGETEKSNIPRLVKNLE--NIEMIAGGDNHSLALDHDGAIWAWGYNSNGQ 264
Query: 103 LGISENIGYS-----------LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
+G + Y EP++++GL +V Q+S G HS+A+T +GE+Y WG N
Sbjct: 265 IGDGSSNVYEKDGQLREKRNKTEPVKLNGLYGKVKQVSAGIKHSTALTENGEVYAWGWNE 324
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
GQLG G +P+ V G G S AV G + +WG G+LG
Sbjct: 325 YGQLGNGSMKDSKVPLRNNV----GRSIIDIETGSYHSFAVDESGVIYAWGDATYGQLGD 380
Query: 212 G 212
G
Sbjct: 381 G 381
>gi|327260067|ref|XP_003214857.1| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Anolis carolinensis]
Length = 409
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 173/405 (42%), Gaps = 66/405 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG YG+LGLG E + P V F + ++K + GG H+ LT+TG ++ G N
Sbjct: 15 WGANSYGQLGLGHREDVFLPQVLKGFLCNRETVKNITGGGGHSAVLTDTGELFLCGQNKN 74
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQLG+ + L S V+Q++ G+ + + G+++ G NS GQLG+ +
Sbjct: 75 GQLGLGHTEDVTHFKLCSSLCGCSVIQVACGWDFTIILAGSGQVFSCGSNSFGQLGI-SQ 133
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG-QESSILG 219
++ + ++E L AA G ++AVT G V WG G S + Q +
Sbjct: 134 TSEGSTVSKRIESLQEKVVNVAA-GLRHALAVTENGSVFQWGIGMSSQAKRACQGEMVPS 192
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
FLR+ P + LE +VKI A+G H+ + + G +Y++G+ K L + +
Sbjct: 193 FLRARQ---PCKVTGLEDARVKIVASGSSHATALTDEGELYVWGNNK-HKQLVNKDDFVL 248
Query: 280 RPSLISG------------------------GELYTWGSNENGCLGIGSI---------- 305
+P I G+++TWG + G LG +
Sbjct: 249 KPQKIDAHYFGGEKVRRVWNGWTHMVAQTEMGKVFTWGRADYGQLGRSGLPYEQMGQDGK 308
Query: 306 --------DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 357
+ LHSP V S Q++CG +H AI G+ +WGW
Sbjct: 309 ASDENSVKEPLHSPALVPALTGAS---QIACGSEHNLAIVGGQCFSWGW----------- 354
Query: 358 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 402
+ G G+G + + P ++ + K L V CG H+ A +
Sbjct: 355 -NEHGMCGNGTEANVCAPQPLDVLSSAKLLYVGCGAGHSMAFCHF 398
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 157/352 (44%), Gaps = 61/352 (17%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWG 148
++ G N +GQLG+ L P + G ++ V I+ G HS+ +T GEL++ G
Sbjct: 12 LFTWGANSYGQLGLGHREDVFL-PQVLKGFLCNRETVKNITGGGGHSAVLTDTGELFLCG 70
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
+N NGQLGLG + + L G Q A G++ ++ + G G+V S G+ G+
Sbjct: 71 QNKNGQLGLGH--TEDVTHFKLCSSLCGCSVIQVACGWDFTIILAGSGQVFSCGSNSFGQ 128
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI--AAAGFLHSACIDENGRVYIFG--- 263
LG + TSE + + K +E ++ K+ AAG H+ + ENG V+ +G
Sbjct: 129 LG----------ISQTSEGS-TVSKRIESLQEKVVNVAAGLRHALAVTENGSVFQWGIGM 177
Query: 264 ----DRAVDKMLFQEGNHARRPSLISG----------------------GELYTWGSNEN 297
RA + AR+P ++G GELY WG+N++
Sbjct: 178 SSQAKRACQGEMVPSFLRARQPCKVTGLEDARVKIVASGSSHATALTDEGELYVWGNNKH 237
Query: 298 GCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 355
L + D + P+++ F V +V GW H A +E GK+ TWG +G
Sbjct: 238 KQL-VNKDDFVLKPQKIDAHYFGGEKVRRVWNGWTHMVAQTEMGKVFTWG-RADYGQLGR 295
Query: 356 DG--HSSGGQLGHGNDVDYIH-----PTIVNFGENVKALQVSCGFNHTGALL 400
G + GQ G +D + + P +V A Q++CG H A++
Sbjct: 296 SGLPYEQMGQDGKASDENSVKEPLHSPALVP--ALTGASQIACGSEHNLAIV 345
>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
Length = 1016
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 158/319 (49%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 207 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 266
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 267 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 325
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 326 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 378
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 379 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 434
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R +L S G++Y WGSN G LG+G + + P V
Sbjct: 435 NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 494
Query: 317 PFSESPVDQVSCGWKHTAA 335
+ Q+S G H+AA
Sbjct: 495 -LQGKNIRQISAGRCHSAA 512
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 127/245 (51%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 261 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 320
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 321 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 379
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 380 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 429
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 430 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 488
Query: 281 PSLIS 285
P+L++
Sbjct: 489 PTLVT 493
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 119/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 186 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 243
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 244 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 294
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + S G+L+T+G+ + G LG+G
Sbjct: 295 SCGFKHSAVV------------------------------TSDGKLFTFGNGDYGRLGLG 324
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 325 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 373
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 374 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 409
>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus cuniculus]
Length = 4860
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 160/322 (49%), Gaps = 46/322 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4111 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4169
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4170 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4222
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4223 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4278
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV-- 314
R +L S G++Y WGSN G LG+G + + P V
Sbjct: 4279 NRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4338
Query: 315 -QGPFSESPVDQVSCGWKHTAA 335
QG + Q+S G H+AA
Sbjct: 4339 LQG----KNIRQISAGRCHSAA 4356
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 127/245 (51%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4164
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4165 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4223
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4224 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4273
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ + L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4274 -RARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4332
Query: 281 PSLIS 285
P+L++
Sbjct: 4333 PTLVT 4337
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4087
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4088 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4138
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4139 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4168
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4169 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4217
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4218 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4253
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
Length = 3507
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 160/322 (49%), Gaps = 46/322 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 2698 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 2757
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 2758 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 2816
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 2817 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 2869
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 2870 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 2925
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV-- 314
R +L S G++Y WGSN G LG+G + + P V
Sbjct: 2926 NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 2985
Query: 315 -QGPFSESPVDQVSCGWKHTAA 335
QG + Q+S G H+AA
Sbjct: 2986 LQG----KNIRQISAGRCHSAA 3003
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 127/245 (51%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 2752 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 2811
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 2812 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 2870
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 2871 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 2920
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 2921 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 2979
Query: 281 PSLIS 285
P+L++
Sbjct: 2980 PTLVT 2984
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 119/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 2677 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 2734
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 2735 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 2785
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + S G+L+T+G+ + G LG+G
Sbjct: 2786 SCGFKHSAVV------------------------------TSDGKLFTFGNGDYGRLGLG 2815
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 2816 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 2864
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 2865 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 2900
>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
Length = 4859
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 160/322 (49%), Gaps = 46/322 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4110 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4168
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4169 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4221
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4222 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV-- 314
R +L S G++Y WGSN G LG+G + + P V
Sbjct: 4278 NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4337
Query: 315 -QGPFSESPVDQVSCGWKHTAA 335
QG + Q+S G H+AA
Sbjct: 4338 LQG----KNIRQISAGRCHSAA 4355
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 127/245 (51%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4104 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4163
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4164 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4223 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4272
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4273 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4331
Query: 281 PSLIS 285
P+L++
Sbjct: 4332 PTLVT 4336
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 159/333 (47%), Gaps = 47/333 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-----------DRA 266
Y P++I+ L+G+ ++ AG S + G+VY +G A
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATA 653
Query: 267 VDKMLFQEGNHARRP----------SLISGGELYTWGSNENGCLGIG-SIDVLHSPERVQ 315
+ L +E R SL E+Y WG+N G G G S + P++V
Sbjct: 654 LRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Query: 316 GPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 714 G-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4086
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4087 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4137
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4138 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4167
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4168 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4216
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4217 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4252
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H +++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G ++++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 160/322 (49%), Gaps = 46/322 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4110 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4168
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4169 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4221
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4222 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV-- 314
R +L S G++Y WGSN G LG+G + + P V
Sbjct: 4278 NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4337
Query: 315 -QGPFSESPVDQVSCGWKHTAA 335
QG + Q+S G H+AA
Sbjct: 4338 LQG----KNIRQISAGRCHSAA 4355
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 127/245 (51%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4104 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4163
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4164 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4223 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4272
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4273 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4331
Query: 281 PSLIS 285
P+L++
Sbjct: 4332 PTLVT 4336
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 159/333 (47%), Gaps = 47/333 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-----------DRA 266
Y P++I+ L+G+ ++ AG S + G+VY +G A
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATA 653
Query: 267 VDKMLFQEGNHARRP----------SLISGGELYTWGSNENGCLGIG-SIDVLHSPERVQ 315
+ L +E R SL E+Y WG+N G G G S + P++V
Sbjct: 654 LRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Query: 316 GPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 714 G-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG S+++ P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4086
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4087 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4137
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4138 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4167
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4168 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4216
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4217 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4252
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H +++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G ++++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 862
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 175/380 (46%), Gaps = 58/380 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL-KALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LG G+ PV+ ++ ALA G +HT+ + + G V+A GLN G
Sbjct: 481 WGFNAYGQLGDGTSSRSPSPVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVWAWGLNASG 540
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG I + P++I GL V I+ G H+ A DG ++ WG NS GQLG G
Sbjct: 541 QLGDGATIDRRI-PVQIPGLAG-VTAIAAGSAHTLAAGQDGAVWSWGANSYGQLGDGTTT 598
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ P+ +V L+G+ A G SVA+ G V +WG G+LG G ++ L
Sbjct: 599 HRLSPV--QVPGLTGV--SAMAAGDAHSVALLQDGTVSAWGRNSWGQLGDGTTAARL--- 651
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
TP + L GV AAG LH+ + ++G V+ +G + ++ +G RR
Sbjct: 652 ------TPVQVHGLTGVTA--VAAGSLHTVALRQDGTVWAWGYNDLGQL--GDGTTTRRL 701
Query: 281 -PSLISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
P + G G ++ WG N G LG GS +P +VQ
Sbjct: 702 APVQVQGLTDVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQLGDGSSTARSTPVQVQ---E 758
Query: 320 ESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
+ V ++ G+ HT A+ + + W WG ++SG QLG+G+ D P V
Sbjct: 759 LTGVSALAAGYAHTVAVKQDGTV-WAWG----------NNSGTQLGNGSSTDRYTPVWVE 807
Query: 380 FGENVKALQVSCGFNHTGAL 399
V AL + G HT A+
Sbjct: 808 GLTGVSAL--TAGRFHTAAV 825
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 177/388 (45%), Gaps = 59/388 (15%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
Q A WGN +G+LG G+ R PV + A+A G HT + + G V+A
Sbjct: 24 QDGTAWAWGNNAWGQLGDGTRTDRLTPVQVPGLT--GVTAVAAGRHHTFAVRQDGTVWAW 81
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
GLN +GQLG + P+++ GL V I+ G H+ A++ DG ++ WG N GQL
Sbjct: 82 GLNVWGQLGDGTHT-ERHTPVQVPGLTG-VTAIAAGRRHTFAVSQDGTVWAWGDNDWGQL 139
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G +A + P+ ++ L+G+ A G + AV G V +WG G+LG G
Sbjct: 140 GDGTRADRHTPV--QLPELTGV--TAIAAGRRHTFAVRQDGTVWAWGDNAWGQLGDGTR- 194
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
T+ TP + L GV AAG H+ + ++G V+ +G+ A+ ++ +G
Sbjct: 195 --------TNRLTPVQVPGLTGVTA--IAAGDYHTLAVRQDGTVWAWGNNALGQL--GDG 242
Query: 276 NHARR------PSL-----ISGGE-----------LYTWGSNENGCLGIGSIDVLHSPER 313
+ R P L IS GE ++ WG N G LG G+ +P +
Sbjct: 243 TYTERLTPVQVPGLTGVTAISAGESHTVAVRQDGTVWAWGDNVWGQLGDGTRTDRLTPVQ 302
Query: 314 VQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
V G S V ++ G +HT A+ + + W W G + GQLG G D +
Sbjct: 303 VPG---LSGVTAIAEGRRHTFAVRQDGTV-WAW----------GLNFWGQLGDGTRSDRL 348
Query: 374 HPTIVNFGENVKALQVSCGFNHTGALLE 401
P V +V A ++ G HT A+ +
Sbjct: 349 TPVQVPDLTSVTA--IAAGDYHTLAVRQ 374
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 122/251 (48%), Gaps = 21/251 (8%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
LQ + WG +G+LG G+ +R PV + A+A G HT+ L + G V+A
Sbjct: 626 LQDGTVSAWGRNSWGQLGDGTTAARLTPVQVHGLT--GVTAVAAGSLHTVALRQDGTVWA 683
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G ND GQLG L P+++ GL +V I+ GY H+ A+ DG ++ WG N GQ
Sbjct: 684 WGYNDLGQLGDGTTT-RRLAPVQVQGLT-DVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQ 741
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G A+ P+ +V+ L+G+ A G+ +VAV G V +WG +LG+G
Sbjct: 742 LGDGSSTARSTPV--QVQELTGV--SALAAGYAHTVAVKQDGTVWAWGNNSGTQLGNGS- 796
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
ST YTP ++ L GV AG H+A + G + +G ++ +
Sbjct: 797 --------STDRYTPVWVEGLTGVSALT--AGRFHTAAVSPEGFGWAWGRNNFGQV--GD 844
Query: 275 GNHARRPSLIS 285
G A RP +
Sbjct: 845 GTTADRPRPVD 855
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 169/385 (43%), Gaps = 64/385 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G+LG G+ R PV + A+A G HT + + G V+A GLN +GQ
Sbjct: 281 WGDNVWGQLGDGTRTDRLTPVQVPGLS--GVTAIAEGRRHTFAVRQDGTVWAWGLNFWGQ 338
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+++ L V I+ G +H+ A+ DG ++ WG N GQLG G
Sbjct: 339 LGDGTR-SDRLTPVQVPDLTS-VTAIAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTYTD 396
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V L+G+ A G +VA+ G V +WG G+LG G
Sbjct: 397 RLTPV--QVPGLTGV--TAIAAGESHTVAMRQDGTVWAWGDNVWGQLGDGTY-------- 444
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T TP + +L V AAG H+ + ++G V +G A ++ +G +R PS
Sbjct: 445 -TDRLTPVQVPDL--TSVTAIAAGDYHTLAVRQDGTVCAWGFNAYGQL--GDGTSSRSPS 499
Query: 283 -------------------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
++ G ++ WG N +G LG G+ P ++ G
Sbjct: 500 PVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVWAWGLNASGQLGDGATIDRRIPVQIPG- 558
Query: 318 FSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 376
+ V ++ G HT AA +G + +W G +S GQLG G + P
Sbjct: 559 --LAGVTAIAAGSAHTLAAGQDGAVWSW------------GANSYGQLGDGTTTHRLSPV 604
Query: 377 IVNFGENVKALQVSCGFNHTGALLE 401
V V A+ + G H+ ALL+
Sbjct: 605 QVPGLTGVSAM--AAGDAHSVALLQ 627
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 154/351 (43%), Gaps = 57/351 (16%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
+ A G HT+ + + G +A G N +GQLG L P+++ GL V ++ G
Sbjct: 9 VTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTD-RLTPVQVPGLTG-VTAVAAGR 66
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
HH+ A+ DG ++ WG N GQLG G + P+ +V L+G+ A G + AV
Sbjct: 67 HHTFAVRQDGTVWAWGLNVWGQLGDGTHTERHTPV--QVPGLTGV--TAIAAGRRHTFAV 122
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
+ G V +WG G+LG G + +TP + EL GV AAG H+
Sbjct: 123 SQDGTVWAWGDNDWGQLGDGTRA---------DRHTPVQLPELTGVTA--IAAGRRHTFA 171
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISG--------------------GELY 290
+ ++G V+ +GD A ++ +G R P + G G ++
Sbjct: 172 VRQDGTVWAWGDNAWGQL--GDGTRTNRLTPVQVPGLTGVTAIAAGDYHTLAVRQDGTVW 229
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSH 350
WG+N G LG G+ +P +V G + V +S G HT A+ + + W W
Sbjct: 230 AWGNNALGQLGDGTYTERLTPVQVPG---LTGVTAISAGESHTVAVRQDGTV-WAW---- 281
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G + GQLG G D + P V V A ++ G HT A+ +
Sbjct: 282 ------GDNVWGQLGDGTRTDRLTPVQVPGLSGVTA--IAEGRRHTFAVRQ 324
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG GS +R PV E + ALA G AHT+ + + G V+A G N Q
Sbjct: 734 WGYNLWGQLGDGSSTARSTPVQVQ--ELTGVSALAAGYAHTVAVKQDGTVWAWGNNSGTQ 791
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+ + GL V ++ G H++A++ +G + WG+N+ GQ+G G A
Sbjct: 792 LGNGSSTD-RYTPVWVEGLTG-VSALTAGRFHTAAVSPEGFGWAWGRNNFGQVGDGTTAD 849
Query: 163 KVIPIPTKVE 172
+ P+ ++
Sbjct: 850 RPRPVDVVIQ 859
>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Cricetulus griseus]
Length = 4859
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 160/322 (49%), Gaps = 46/322 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4110 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4168
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4169 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4221
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4222 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV-- 314
R +L S G++Y WGSN G LG+G + + P V
Sbjct: 4278 NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4337
Query: 315 -QGPFSESPVDQVSCGWKHTAA 335
QG + Q+S G H+AA
Sbjct: 4338 LQG----KNIRQISAGRCHSAA 4355
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 127/245 (51%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4104 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4163
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4164 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4223 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4272
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4273 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4331
Query: 281 PSLIS 285
P+L++
Sbjct: 4332 PTLVT 4336
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 159/333 (47%), Gaps = 47/333 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-----------DRA 266
Y P++I+ L+G+ ++ AG S + G+VY +G A
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATA 653
Query: 267 VDKMLFQEGNHARRP----------SLISGGELYTWGSNENGCLGIG-SIDVLHSPERVQ 315
+ L +E R SL E+Y WG+N G G G S + P++V
Sbjct: 654 LRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Query: 316 GPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 714 G-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4086
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4087 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4137
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4138 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4167
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4168 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4216
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4217 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4252
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H +++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G ++++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
Length = 580
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 155/332 (46%), Gaps = 50/332 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + P V A H + +ACG HT +T+ G V G + GQ
Sbjct: 94 WGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVVTDVGLVMCWGKGNSGQ 153
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + SL P +S L E + QI+ G H+ A++V+GE+Y WG ++GQLG+GK
Sbjct: 154 LGQGDWTS-SLLPRTVSTLYNEKIRQIACGMAHTLALSVNGEIYSWGAGADGQLGVGKHQ 212
Query: 162 AKV--IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + P KV + A G +A+T ++ SWG G GRLG G
Sbjct: 213 EETADVATPQKVRVDEEEKFEFIACGSRHCMAITDDCRLFSWGLGADGRLGLGD------ 266
Query: 220 FLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGD---------RAVDK 269
S S ++P +++ +E +++ AAG H+A + +NG ++ G A +
Sbjct: 267 ---SESRFSPTVVRRSIENLRICYVAAGGHHTAVLSDNGEIFTCGRGSYGQLGHGDADPQ 323
Query: 270 MLFQEGNHARRPSLI-------------------------SGGELYTWGSNENGCLGIGS 304
+ ++ R L+ + GE++ WG+ E+G LG G
Sbjct: 324 LTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTLVISTAGEVFAWGAAEDGQLGTGG 383
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 336
+ +SP V+ V VSCG H+AA+
Sbjct: 384 TEGANSP--VELTSLRGLVGDVSCGLVHSAAV 413
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 139/327 (42%), Gaps = 79/327 (24%)
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS----------------TGYHHSSAIT 139
G +FG+LG + + LEP R+ K+ V +S G HH+ A+T
Sbjct: 28 GWGEFGRLGHGDTLS-QLEPKRLRFDKRFPVSLSFTALAHESLNGAIYVACGGHHTVAVT 86
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
DGE+ WG + GQLG G + +P K LS A G+ + VT G V+
Sbjct: 87 EDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKA--LSNHRVCGVACGYYHTAVVTDVGLVM 144
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
WG G SG+LG G TS PR + L K++ A G H+ + N
Sbjct: 145 CWGKGNSGQLGQGD---------WTSSLLPRTVSTLYNEKIRQIACGMAHTLALSVN--- 192
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG-----SIDVLHSPERV 314
GE+Y+WG+ +G LG+G + DV +P++V
Sbjct: 193 ---------------------------GEIYSWGAGADGQLGVGKHQEETADVA-TPQKV 224
Query: 315 QGPFSESPVDQVSCGWKHTAAISEG-KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
+ E + ++CG +H AI++ ++ +WG G G+LG G+
Sbjct: 225 R-VDEEEKFEFIACGSRHCMAITDDCRLFSWGLGAD------------GRLGLGDSESRF 271
Query: 374 HPTIVNFG-ENVKALQVSCGFNHTGAL 399
PT+V EN++ V+ G +HT L
Sbjct: 272 SPTVVRRSIENLRICYVAAGGHHTAVL 298
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 89/207 (42%), Gaps = 38/207 (18%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
GG + G G GRLGHG + S+ P+ ++ + V ++ H +
Sbjct: 20 GGKRTSLQGWGEFGRLGHGD---------TLSQLEPKRLRFDKRFPVSLSFTALAHESL- 69
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
NG +Y+ G+H ++ GE+ +WG G LG G+ P
Sbjct: 70 --NGAIYVACG----------GHHT--VAVTEDGEVVSWGWGNEGQLGSGNAFDQTVPAV 115
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V+ S V V+CG+ HTA +++ G ++ WG G S GQLG G+
Sbjct: 116 VKA-LSNHRVCGVACGYYHTAVVTDVGLVMCWGKGNS------------GQLGQGDWTSS 162
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGAL 399
+ P V+ N K Q++CG HT AL
Sbjct: 163 LLPRTVSTLYNEKIRQIACGMAHTLAL 189
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 13/77 (16%)
Query: 326 VSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 384
V+CG HT A++E G++++WGWG GQLG GN D P +V N
Sbjct: 75 VACGGHHTVAVTEDGEVVSWGWGNE------------GQLGSGNAFDQTVPAVVKALSNH 122
Query: 385 KALQVSCGFNHTGALLE 401
+ V+CG+ HT + +
Sbjct: 123 RVCGVACGYYHTAVVTD 139
>gi|146169381|ref|XP_001471365.1| regulator of chromosome condensation [Tetrahymena thermophila]
gi|146145109|gb|EDK31655.1| regulator of chromosome condensation [Tetrahymena thermophila
SB210]
Length = 448
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 175/371 (47%), Gaps = 70/371 (18%)
Query: 60 WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI-SENIGYSLEPLRI 118
+ P VCS + + LACG HT F+ + G +Y G N G+LGI +++ S +P +
Sbjct: 13 YYPRVCSF--QIVIHQLACGLDHTAFVAKNGYLYTMGSNALGKLGIGQQSLQNSFQPQLV 70
Query: 119 SGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
S L K +V+Q+S G+ H+ AI GEL+ WG +S GQLG+ + P L GI
Sbjct: 71 SALSKYKVMQVSCGHSHTCAIIDSGELFSWGDSSEGQLGINSNGSHYNPQLVNFSDLKGI 130
Query: 178 --FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
F + G+ +VAV G+V S+G+G G+LG G ++ +Y P L+ L
Sbjct: 131 NTFVTDVSCGYYHTVAVLKNGQVCSFGSGKKGQLGTGNQN---------KQYKPFLLNSL 181
Query: 236 -EGVKVKIAAAGFLHSACIDENGRVYIFG-------------------------DRAVDK 269
+ +KVK GF H+ +DE+GRVY G + + K
Sbjct: 182 SQIIKVK---CGFYHTLFLDESGRVYSCGLNDEGQLGQGHNEGNISSPRLVLELEHSFIK 238
Query: 270 MLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 329
+F G+H+ ++ E+Y +G ++ G L+ P+ V+ + V+++S G
Sbjct: 239 KIF-AGSHS--AAITDANEIYFFGKSQLG-------QFLY-PQLVR--ICQGDVNEISIG 285
Query: 330 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 388
A++ +GK+ +WG + GQLG G+ I P++V K +
Sbjct: 286 NHFGVAVTYDGKVYSWGI------------NQQGQLGQGDSDVRIIPSLVEPLNEKKVIS 333
Query: 389 VSCGFNHTGAL 399
+CG N+ L
Sbjct: 334 ATCGENYVICL 344
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 154/316 (48%), Gaps = 37/316 (11%)
Query: 44 GNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
G+ G+LG+G SL++ ++P + SA K+ + ++CG +HT + ++G +++ G + G
Sbjct: 47 GSNALGKLGIGQQSLQNSFQPQLVSALSKYKVMQVSCGHSHTCAIIDSGELFSWGDSSEG 106
Query: 102 QLGISENIGYSLEPLRIS-----GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
QLGI+ N G P ++ G+ V +S GY+H+ A+ +G++ +G GQLG
Sbjct: 107 QLGINSN-GSHYNPQLVNFSDLKGINTFVTDVSCGYYHTVAVLKNGQVCSFGSGKKGQLG 165
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + + P + LS I + GF ++ + G+V S G G+LG G
Sbjct: 166 TGNQNKQYKPFL--LNSLSQII--KVKCGFYHTLFLDESGRVYSCGLNDEGQLGQGHNEG 221
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE-- 274
+ +PRL+ ELE +K AG HSA I + +Y FG + + L+ +
Sbjct: 222 NIS--------SPRLVLELEHSFIKKIFAG-SHSAAITDANEIYFFGKSQLGQFLYPQLV 272
Query: 275 ------------GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
GNH ++ G++Y+WG N+ G LG G DV P V+ P +E
Sbjct: 273 RICQGDVNEISIGNHF-GVAVTYDGKVYSWGINQQGQLGQGDSDVRIIPSLVE-PLNEKK 330
Query: 323 VDQVSCGWKHTAAISE 338
V +CG + + +
Sbjct: 331 VISATCGENYVICLGQ 346
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 112/245 (45%), Gaps = 26/245 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+G G+LG G+ +++P + ++ + + + CG HTLFL E+G VY+ GLND GQ
Sbjct: 156 FGSGKKGQLGTGNQNKQYKPFLLNSLSQ--IIKVKCGFYHTLFLDESGRVYSCGLNDEGQ 213
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG N G P + L+ ++ HS+AIT E+Y +GK+ GQ
Sbjct: 214 LGQGHNEGNISSPRLVLELEHSFIKKIFAGSHSAAITDANEIYFFGKSQLGQF------- 266
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P V G + ++G VAVT GKV SWG G+LG G
Sbjct: 267 ---LYPQLVRICQGD-VNEISIGNHFGVAVTYDGKVYSWGINQQGQLGQGD--------- 313
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDE--NGRVYIFGDRAVDKMLFQEGNHARR 280
S P L++ L KV A G + C+ + N R+ + KML +
Sbjct: 314 SDVRIIPSLVEPLNEKKVISATCGENYVICLGQVMNSRLAKLASQK--KMLKFQSPDNNN 371
Query: 281 PSLIS 285
SLI+
Sbjct: 372 NSLIN 376
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 65/122 (53%), Gaps = 20/122 (16%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHS--PERVQGPFSESPVDQVSCGWKHTAAISE-GKILT 343
G LYT GSN G LGIG + +S P+ V S+ V QVSCG HT AI + G++ +
Sbjct: 41 GYLYTMGSNALGKLGIGQQSLQNSFQPQLV-SALSKYKVMQVSCGHSHTCAIIDSGELFS 99
Query: 344 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE----NVKALQVSCGFNHTGAL 399
WG SS GQLG ++ + +P +VNF + N VSCG+ HT A+
Sbjct: 100 WG------------DSSEGQLGINSNGSHYNPQLVNFSDLKGINTFVTDVSCGYYHTVAV 147
Query: 400 LE 401
L+
Sbjct: 148 LK 149
>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 160/322 (49%), Gaps = 46/322 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4110 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4168
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4169 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4221
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4222 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV-- 314
R +L S G++Y WGSN G LG+G + + P V
Sbjct: 4278 NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4337
Query: 315 -QGPFSESPVDQVSCGWKHTAA 335
QG + Q+S G H+AA
Sbjct: 4338 LQG----KNIRQISAGRCHSAA 4355
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 127/245 (51%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4104 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4163
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4164 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4223 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4272
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4273 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4331
Query: 281 PSLIS 285
P+L++
Sbjct: 4332 PTLVT 4336
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 159/333 (47%), Gaps = 47/333 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-----------DRA 266
Y P++I+ L+G+ ++ AG S + G+VY +G A
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATA 653
Query: 267 VDKMLFQEGNHARRP----------SLISGGELYTWGSNENGCLGIG-SIDVLHSPERVQ 315
+ L +E R SL E+Y WG+N G G G S + P++V
Sbjct: 654 LRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Query: 316 GPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 714 G-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4086
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4087 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4137
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4138 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4167
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4168 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4216
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4217 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4252
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H +++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G ++++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
Length = 4870
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 160/322 (49%), Gaps = 46/322 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4061 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4120
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4121 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4179
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4180 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4232
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4233 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4288
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV-- 314
R +L S G++Y WGSN G LG+G + + P V
Sbjct: 4289 NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4348
Query: 315 -QGPFSESPVDQVSCGWKHTAA 335
QG + Q+S G H+AA
Sbjct: 4349 LQG----KNIRQISAGRCHSAA 4366
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 127/245 (51%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4115 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4174
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4175 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4233
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4234 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4283
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4284 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4342
Query: 281 PSLIS 285
P+L++
Sbjct: 4343 PTLVT 4347
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 159/333 (47%), Gaps = 47/333 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-----------DRA 266
Y P++I+ L+G+ ++ AG S + G+VY +G A
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATA 653
Query: 267 VDKMLFQEGNHARRP----------SLISGGELYTWGSNENGCLGIG-SIDVLHSPERVQ 315
+ L +E R SL E+Y WG+N G G G S + P++V
Sbjct: 654 LRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Query: 316 GPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 714 G-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4040 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4097
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4098 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4148
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4149 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4178
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4179 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4227
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4228 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4263
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H +++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G ++++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Meleagris
gallopavo]
Length = 4334
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 157/319 (49%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 3525 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 3584
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 3585 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 3643
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G +VAV+ G V ++G G G+LG G
Sbjct: 3644 TSNK--KLPERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGN----- 3696
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 3697 ----STAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 3752
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R +L S G++Y WGSN G LG+G + + P +
Sbjct: 3753 NRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITV 3812
Query: 317 PFSESPVDQVSCGWKHTAA 335
+ Q+S G H+AA
Sbjct: 3813 -LQGKNIRQISAGRCHSAA 3830
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 128/245 (52%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 3579 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 3638
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A+++DG + + +G G+LGLG
Sbjct: 3639 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNS 3697
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 3698 TAK--SSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 3747
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ + L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 3748 -RARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVRE 3806
Query: 281 PSLIS 285
P+LI+
Sbjct: 3807 PTLIT 3811
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGVSIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 116/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G G + +++
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATAL--- 654
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 655 -------RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 3504 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 3561
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 3562 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 3612
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 3613 SCGFKHSAVVTADGKLFTFGN----------GDYGR--------------------LGLG 3642
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 3643 NTSNKKLPERVTA-LEGYQIGQVACGLNHTVAVSMDGSMVWAFG--------DGDY--GK 3691
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 3692 LGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVAL 3727
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 86/189 (45%), Gaps = 11/189 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSWGAGGSGRLGHGQESSIL 218
+ P KV L G+ +Q + G S+A T +V++W L E S
Sbjct: 704 GPITK-PKKVSGLDGVSIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDL----EESTF 758
Query: 219 GFLRSTSEY 227
LRS E+
Sbjct: 759 SHLRSFLEH 767
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+GV ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGVSIQQISAGTSHS 730
>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1-like [Anolis carolinensis]
Length = 4963
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 160/325 (49%), Gaps = 40/325 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4143 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4202
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4203 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 4261
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G + A G ++ V T G V ++G G G+LG G
Sbjct: 4262 TSNK--KLPERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGN----- 4314
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4315 ----STAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4370
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R +L + G++Y WGSN G LG+G + + P V
Sbjct: 4371 NRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGLGHTNHVREPTLVTS 4430
Query: 317 PFSESPVDQVSCGWKHTAAISEGKI 341
+S V Q+S G H+AA S +
Sbjct: 4431 LQGKS-VRQISAGRCHSAAWSSPPV 4454
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 127/245 (51%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4197 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 4256
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ +++ G +H+ ++ DG + + +G G+LGLG
Sbjct: 4257 LGLGNTSNKKL-PERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGNS 4315
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4316 TAKS--SPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4365
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ + L GV V+ A G H+ + +G VY +G + ++ NH R
Sbjct: 4366 -RARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGLGHTNHVRE 4424
Query: 281 PSLIS 285
P+L++
Sbjct: 4425 PTLVT 4429
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 430 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 488
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 489 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 548
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 549 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 604
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 605 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 654
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 655 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 714
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 715 SG-LDGVAIQQISAGTSHSLAWTALPRDRQVVAW 747
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 138/324 (42%), Gaps = 60/324 (18%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
G ++ET VY G N QL G E I L+P +++ + I G + +
Sbjct: 364 GGDAPVVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFV 419
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGG 196
I+ DG + GK S G+LGLG + E I ++ G + ++A T G
Sbjct: 420 ISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEG 479
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDE 255
+V SWG G G+LGHG S+++ P+LI+ L+G V +AG+ HSA + E
Sbjct: 480 EVFSWGDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 530
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
+G ELYTWG + G LG G + + P V+
Sbjct: 531 DG------------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK 560
Query: 316 GPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
S V +VSCG HT A+S+ W +GG G+LGHG+ P
Sbjct: 561 ---DISNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKP 607
Query: 376 TIVNFGENVKALQVSCGFNHTGAL 399
++ + + +V G + AL
Sbjct: 608 KVIEALQGMFIRKVCAGSQSSLAL 631
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 119/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4122 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4179
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4180 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4230
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4231 SCGFKHSAVVTADGKLFTFGN----------GDYGR--------------------LGLG 4260
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + +V+CG HT +S + W +G DG G+
Sbjct: 4261 NTSNKKLPERVAA-LEGYQIGEVACGLNHTLVVSTDGSMVWAFG--------DGDY--GK 4309
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4310 LGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVAL 4345
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 588 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 645
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 646 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 705
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L G+ +Q + G S+A T +V++W
Sbjct: 706 GPITK-PKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 747
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 537 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 594
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 595 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 651
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 652 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 703
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+GV ++ +AG HS
Sbjct: 704 --STGPITKPKKVSGLDGVAIQQISAGTSHS 732
>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 909
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 160/342 (46%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY G+N GQLG E G +P +I
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AAG HS + +G V FG WG N G
Sbjct: 192 LAQVAAGGAHSFALSLSGAV--FG----------------------------WGMNNAGQ 221
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ SP V+ ++ V +SCG +HTA +++ G + T+G G
Sbjct: 222 LGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG----------- 269
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT AL+
Sbjct: 270 -SCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310
>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
Length = 913
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 160/342 (46%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY G+N GQLG E G +P +I
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AAG HS + +G V FG WG N G
Sbjct: 192 LAQVAAGGAHSFALSLSGAV--FG----------------------------WGMNNAGQ 221
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ SP V+ ++ V +SCG +HTA +++ G + T+G G
Sbjct: 222 LGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG----------- 269
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT AL+
Sbjct: 270 -SCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310
>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
Length = 382
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 156/342 (45%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL + +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE--------FPSQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AAG HS + +G V + WG N G
Sbjct: 192 LAQVAAGGAHSFALSLSGAV------------------------------FGWGMNNAGQ 221
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ SP V+ V +SCG +HTA +++ G + T+G G
Sbjct: 222 LGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAG----------- 269
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT A +
Sbjct: 270 -SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Taeniopygia guttata]
Length = 1050
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 168/362 (46%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG YG+ G+GS P V ++K +ACGG H++FL E G VY GLN
Sbjct: 4 WGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + +P +I L + +V ++ G HS A++ G+L+ WG S+GQLGL
Sbjct: 64 GQLG---HDCEGSKPEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGL-T 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECP--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S+ +P+ +K L+G+ + AAG HS + +G V FG
Sbjct: 177 -----SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAV--FG---------------- 213
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE- 338
WG N +G LG+ SP V+ S+ V +SCG +HTA +++
Sbjct: 214 ------------WGKNSSGQLGLSDERDRESPCHVKLLRSQKVV-YISCGEEHTAVLTKS 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G G S GQLGH + D ++P V + Q++CG +HT A
Sbjct: 261 GGVFTFGAG------------SCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
Length = 913
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 160/342 (46%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY G+N GQLG E G +P +I
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AAG HS + +G V FG WG N G
Sbjct: 192 LAQVAAGGAHSFALSLSGAV--FG----------------------------WGMNNAGQ 221
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ SP V+ ++ V +SCG +HTA +++ G + T+G G
Sbjct: 222 LGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG----------- 269
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT AL+
Sbjct: 270 -SCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310
>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 1050
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 160/342 (46%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY G+N GQLG E G +P +I
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AAG HS + +G V FG WG N G
Sbjct: 192 LAQVAAGGAHSFALSLSGAV--FG----------------------------WGMNNAGQ 221
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ SP V+ ++ V +SCG +HTA +++ G + T+G G
Sbjct: 222 LGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG----------- 269
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT AL+
Sbjct: 270 -SCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310
>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 160/342 (46%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY G+N GQLG E G +P +I
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AAG HS + +G V FG WG N G
Sbjct: 192 LAQVAAGGAHSFALSLSGAV--FG----------------------------WGMNNAGQ 221
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ SP V+ ++ V +SCG +HTA +++ G + T+G G
Sbjct: 222 LGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG----------- 269
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT AL+
Sbjct: 270 -SCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310
>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 160/342 (46%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY G+N GQLG E G +P +I
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AAG HS + +G V FG WG N G
Sbjct: 192 LAQVAAGGAHSFALSLSGAV--FG----------------------------WGMNNAGQ 221
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ SP V+ ++ V +SCG +HTA +++ G + T+G G
Sbjct: 222 LGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG----------- 269
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT AL+
Sbjct: 270 -SCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310
>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Amphimedon queenslandica]
Length = 599
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 159/356 (44%), Gaps = 50/356 (14%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWG GD GRLG + R+ P V + ++ +ACGG+HT+ L G V++ G G
Sbjct: 166 LWGGGDRGRLGHKDDKPRFLPNVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQG 225
Query: 102 QLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG N+ PL I G ++ VV ++ +HS+ I+ DG LY WGK + LG
Sbjct: 226 CLG-HGNLRDRYSPLMIDGPLRDVNVVHVACYENHSAVISEDGNLYTWGK-AGPFLGYMD 283
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P V+ L G Q A G ++ + G+V S+G G LG G + +I
Sbjct: 284 DSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELGQGHDKAIT- 342
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P ++ L V + + G HSA IDE+G ++++G
Sbjct: 343 --------KPTMVPNL--VSICKVSCGRHHSAAIDEDGVLFMWG---------------- 376
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
WG+ G LG G L SP V G F++ P++ VSCG+ HTAAI+
Sbjct: 377 ------------WGA--RGQLGQGEPKSLFSPTPVNG-FNDQPLEDVSCGYGHTAAITAN 421
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY---IHPTIVNFGENVKALQVSCG 392
+ + WG + + S G+L + I PT +N G N L S G
Sbjct: 422 GV-AYCWGDNASSQCGVPSSVYGELSSPRGIVLPSGIRPTQINCGANFTVLVTSIG 476
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 141/321 (43%), Gaps = 55/321 (17%)
Query: 107 ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG--ELYMWGKNSNGQLGLGKKAAKV 164
E + L +R S + ++ +++ G + + D +LY+WG G+LG K K
Sbjct: 125 EAVSAKLVEMRGSIVSEDRLEVQLGTIKTKVLLKDNSCDLYLWGGGDRGRLG--HKDDKP 182
Query: 165 IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
+P VE L G A G ++A+ G+V SWGAG G LGHG LR
Sbjct: 183 RFLPNVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQGCLGHGN-------LR-- 233
Query: 225 SEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGD------------------R 265
Y+P +I L V V A HSA I E+G +Y +G R
Sbjct: 234 DRYSPLMIDGPLRDVNVVHVACYENHSAVISEDGNLYTWGKAGPFLGYMDDSVTKQTKPR 293
Query: 266 AVDKML---FQEGNHARRPSLI--SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
VD + + R +L+ G +Y++G N+ G LG G + P V S
Sbjct: 294 LVDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELGQGHDKAITKPTMVPNLVS- 352
Query: 321 SPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
+ +VSCG H+AAI E G + WGWG GQLG G PT VN
Sbjct: 353 --ICKVSCGRHHSAAIDEDGVLFMWGWGAR------------GQLGQGEPKSLFSPTPVN 398
Query: 380 FGENVKALQ-VSCGFNHTGAL 399
G N + L+ VSCG+ HT A+
Sbjct: 399 -GFNDQPLEDVSCGYGHTAAI 418
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 12/212 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G +G LG G ++ +P + S+ ++CG H+ + E G ++ G GQ
Sbjct: 325 FGINKFGELGQGHDKAITKPTMVPNLV--SICKVSCGRHHSAAIDEDGVLFMWGWGARGQ 382
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG E P ++G + ++ +S GY H++AIT +G Y WG N++ Q G+
Sbjct: 383 LGQGEPKSL-FSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGDNASSQCGVPSSV 441
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P + SGI Q G +V VT G++ +WG SG+LG+G+
Sbjct: 442 YGELSSPRGIVLPSGIRPTQINCGANFTVLVTSIGQLFTWGCNMSGQLGNGEAKKTFS-- 499
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
P ++ L +VK+ A G H C+
Sbjct: 500 ------QPMPVESLSEKRVKMVACGEDHIGCL 525
>gi|326671858|ref|XP_685964.5| PREDICTED: hypothetical protein LOC557752 [Danio rerio]
Length = 1413
Score = 124 bits (312), Expect = 7e-26, Method: Composition-based stats.
Identities = 105/389 (26%), Positives = 169/389 (43%), Gaps = 55/389 (14%)
Query: 8 AMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSA 67
A +K++LK D+ L G + + + F ++G+ ++G+LGLG+ + +P A
Sbjct: 27 APSKFWLKNDVPLRISCGDEHTALVTENGKLF--MFGSNNWGQLGLGTKTTVNKPTCVKA 84
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVV 126
+ +K ACG HTL T G +YA G N+ GQLG+ + N S + + +
Sbjct: 85 LKSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIK 144
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
++ G + S+A+T DG LYMWG NS GQ+GLGK++ + P V G + G+
Sbjct: 145 MLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSV----GKRVFWVSCGY 200
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S VT G + ++G SG+LG E + + P+ + ++ V++A G
Sbjct: 201 YHSAFVTVDGALYTFGEKDSGKLGLSTE-------KLANHKVPQQVTDIPDRVVQVACGG 253
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSID 306
H+ + EN E+Y++G + G LG G+
Sbjct: 254 G-HTVALTEN-------------------------------EVYSFGLGQFGQLGHGTFI 281
Query: 307 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGH 366
RV F + V +CG HTA I++ +L G HG LG
Sbjct: 282 FESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLG---------LGE 332
Query: 367 GNDVDYIHPTIVNFGENVKALQVSCGFNH 395
N + PT+ + V+CG H
Sbjct: 333 ENFTNQFKPTLCPRFLDYHVHSVTCGGCH 361
Score = 60.5 bits (145), Expect = 2e-06, Method: Composition-based stats.
Identities = 64/264 (24%), Positives = 103/264 (39%), Gaps = 68/264 (25%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P ++ C G E + VT GK+ +G+ G+LG G ++++
Sbjct: 37 VPLRISC-----------GDEHTALVTENGKLFMFGSNNWGQLGLGTKTTV--------- 76
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY-------------------------I 261
P +K L+ +VK+ A G H+ G +Y
Sbjct: 77 NKPTCVKALKSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEF 136
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
F + KML N + +L G LY WG N G +G+G +P+ V
Sbjct: 137 FNKQGPIKMLAAGSNTS--AALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVS---VGK 191
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT---I 377
V VSCG+ H+A ++ +G + T+G G+LG + H +
Sbjct: 192 RVFWVSCGYYHSAFVTVDGALYTFG------------EKDSGKLGLSTEKLANHKVPQQV 239
Query: 378 VNFGENVKALQVSCGFNHTGALLE 401
+ + V +QV+CG HT AL E
Sbjct: 240 TDIPDRV--VQVACGGGHTVALTE 261
>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
Length = 983
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 159/342 (46%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AAG HS + +G V FG WG N G
Sbjct: 192 LAQVAAGGAHSFALSLSGAV--FG----------------------------WGMNNAGQ 221
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ SP V+ ++ V +SCG +HTA +++ G + T+G G
Sbjct: 222 LGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG----------- 269
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT A +
Sbjct: 270 -SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
lyrata]
gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
lyrata]
Length = 1100
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 179/391 (45%), Gaps = 68/391 (17%)
Query: 50 RLGLGSLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYATGLNDFGQLG-- 104
R+G SLE + ++ A E ++ +ACGG H + +T+ G ++ G G+LG
Sbjct: 284 RVG-SSLEIKMDSLLPKALESTIVLDVQYIACGGQHAVLVTKQGESFSWGEESEGRLGHG 342
Query: 105 ISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
+ N+ + P I L ++ ++ G +HS A+T+ G+LY WGK G LG G + +
Sbjct: 343 VDSNVQH---PKLIDALSTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSH 399
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+P + GI A G + VT G++ ++G G G LGHG S+
Sbjct: 400 WVPKRVNF-LMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV------ 452
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDE------------NGRVYIFGDRAVDKM- 270
+ PR + L+G++ AA G H+A + E +G+++ +GD ++
Sbjct: 453 ---FIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLG 509
Query: 271 --------------LFQEGN-------HARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
E N H+ +L + G +YT GS G LG D
Sbjct: 510 HGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADG-K 568
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
P RV+G +S V++++CG H A + S ++ TWG G S G+LGHG+
Sbjct: 569 VPTRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKG------------SNGRLGHGD 616
Query: 369 DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
D PT+V ++ + ++CG N T A+
Sbjct: 617 ADDRNSPTLVESLKDKQVKSIACGSNFTAAV 647
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 76/152 (50%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G E + P +A + + +ACG + T+ LT +G VY G +GQ
Sbjct: 500 WGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 559
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG G P R+ G K V +I+ G +H + +T E+Y WGK SNG+LG G
Sbjct: 560 LGNPHADGKV--PTRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGD- 616
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
A PT VE L K A G + AV
Sbjct: 617 -ADDRNSPTLVESLKDKQVKSIACGSNFTAAV 647
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 117/272 (43%), Gaps = 62/272 (22%)
Query: 142 GELYMWGKNS--------NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G+++MWG+ N ++G + +P +E + + A G + +V VT
Sbjct: 264 GDVFMWGEGIGEGVLGGGNYRVGSSLEIKMDSLLPKALESTIVLDVQYIACGGQHAVLVT 323
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+ SWG GRLGHG +S++ P+LI L +++ A G HS +
Sbjct: 324 KQGESFSWGEESEGRLGHGVDSNV---------QHPKLIDALSTTNIELVACGEYHSCAV 374
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH-SPE 312
G+LYTWG + G LG G+ +V H P+
Sbjct: 375 ------------------------------TLSGDLYTWGKGDFGILGHGN-EVSHWVPK 403
Query: 313 RVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
RV V ++CG HTA + S G++ T+G GTF G LGHG+
Sbjct: 404 RVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFG----DGTF--------GVLGHGDRKS 451
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
P V+ + ++ ++ +CG HT A++E +
Sbjct: 452 VFIPREVDSLKGLRTVRAACGVWHTAAVVEVM 483
>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
queenslandica]
Length = 4694
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 168/386 (43%), Gaps = 54/386 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P +C + + + A+ GG TLF +T+ G VYA+G G
Sbjct: 3839 WGHNHRGQLGGIEGNKVKSPRLCESLSELN-PAMITGGEQTLFAVTDDGKVYASGYAAHG 3897
Query: 102 QLGI--SENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S+N+ L L G+ + + I +G H A+T GELY WG+ +G+LGL
Sbjct: 3898 RLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGEDGKLGL 3957
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + +P +E L A G S +T G + +WG G GRLGH +
Sbjct: 3958 GTTVN--MNVPHLIESLKSKHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLGHNDHET- 4014
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGD----------- 264
++ P+L+ L+G +V A +G + C +G V+ +GD
Sbjct: 4015 --------QHKPKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGKLGRGGN 4066
Query: 265 ---RAVDKMLFQEGNHARR--------PSLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ K+ G H + +L + G +YTWG + LG G +P R
Sbjct: 4067 EGSKVPKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGHGDDSHQRTPRR 4126
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V G + V + CG H +E GK+ +W G + GQ+G+
Sbjct: 4127 VLGLLAHENVIDIGCGSLHCIVCTESGKVFSW------------GDNDEGQIGNDTTQAV 4174
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGA 398
P +N +N+ V+CG H+ A
Sbjct: 4175 SVPKRINITDNICIDHVACGSAHSIA 4200
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 175/388 (45%), Gaps = 53/388 (13%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+WG D +LG E++ + P+ + A G + +++ G V+A G
Sbjct: 2928 VWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFACGEGSS 2987
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LGI + P +IS L VV+ +S H A+T DG+++ WG GQLG
Sbjct: 2988 GRLGIGGFANIRM-PHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQYGQLGH 3046
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P +E ++ + G S AV+ G++ +WG G GRLGHG
Sbjct: 3047 G--SLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGRLGHGD---- 3100
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE-NGRVYIFGDRAVDKMLFQEGN 276
S ++ P+L++ LE V++ A G ++ + + ++ +GD + K+ ++G+
Sbjct: 3101 -----SNNQTKPKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGLKDGS 3155
Query: 277 HARR--------PS--------------LISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
+ PS L G++YTWG E LG S V P V
Sbjct: 3156 SSTDVPVQVITFPSNIIQIECGMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQPIPTLV 3215
Query: 315 QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
G S++ + QV+ G H A+ S G++ +WG ++ H GQ G+ + +
Sbjct: 3216 DGLASKT-ITQVAVGALHCLALTSSGEVYSWG---------DNEH---GQQGNNSTICNR 3262
Query: 374 HPTIVNFGENVKALQVSCGFNHTGALLE 401
P IV + + +++CG +H+ A +
Sbjct: 3263 KPQIVASLKGHRICKIACGSSHSIAFAQ 3290
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 148/353 (41%), Gaps = 38/353 (10%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G + P S+ + ++ A++C G H L +T G V++ G +G
Sbjct: 2983 GEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQYG 3042
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG Y + K + ++S G HS+A++V+GEL+ WG+ ++G+LG G
Sbjct: 3043 QLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGRLGHGDSN 3102
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSILGF 220
+ P V L + A G + + G L +WG G G+LG SS
Sbjct: 3103 NQT--KPKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGLKDGSS---- 3156
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S P + ++I G S + + G+VY +G ++ +
Sbjct: 3157 ----STDVPVQVITFPSNIIQI-ECGMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQPI 3211
Query: 281 PSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
P+L+ G GE+Y+WG NE+G G S P+ V
Sbjct: 3212 PTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGDNEHGQQGNNSTICNRKPQIV-ASL 3270
Query: 319 SESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+ +++CG H+ A ++G LT S +FS G + HG D
Sbjct: 3271 KGHRICKIACGSSHSIAFAQGS-LTTAVKFSPISFSNSKDPLGASIVHGKSSD 3322
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 137/331 (41%), Gaps = 67/331 (20%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY- 132
K H + LT G V+ G +++E L G +E++QI
Sbjct: 466 KEFYSSPKHRVVLTVHGTVFYVMDASMGD--------FTVEQLFFPG-DEEIIQIDHNPS 516
Query: 133 -HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
+H A+T DG++Y WG+ SNG LG+G ++ P T V LSG + G S A
Sbjct: 517 GNHILALTKDGKVYSWGQGSNGVLGIGNTESQTAP--TAVAALSGDRIVHISAGSMHSAA 574
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLH 249
VT G + +WG G GR LG + + P +++ L GVK+ +G H
Sbjct: 575 VTEDGVLYTWGKGSYGR---------LGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAH 625
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
+ +D+ G+V+ +WG + G LG D
Sbjct: 626 TLALDDTGQVW------------------------------SWGDGDYGKLGRPGSDQNK 655
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
P+ + G S SPV ++ CG + + A++ +GK+ +WG G ++ QLGHGN
Sbjct: 656 VPKPISGIGSTSPVVKIICGNQISMALTKDGKLYSWGCGDTY------------QLGHGN 703
Query: 369 DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
P ++ VS G H AL
Sbjct: 704 QEHVRQPKLIEGLSETVVSDVSVGAQHCVAL 734
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 124/275 (45%), Gaps = 48/275 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI 138
G H L LT+ G VY+ G G LGI N P ++ L +V IS G HS+A+
Sbjct: 517 GNHILALTKDGKVYSWGQGSNGVLGIG-NTESQTAPTAVAALSGDRIVHISAGSMHSAAV 575
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGG 196
T DG LY WGK S G+LG G K+ IPT VE L+G+ Q G ++A+ G
Sbjct: 576 TEDGVLYTWGKGSYGRLGHGNAEDKL--IPTIVEGLNGVKIVQVDCGSGDAHTLALDDTG 633
Query: 197 KVLSWGAGGSGRLGH-GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
+V SWG G G+LG G + + + S T ++K + G ++ +A
Sbjct: 634 QVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMA------------ 681
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L G+LY+WG + LG G+ + + P+ ++
Sbjct: 682 ---------------------------LTKDGKLYSWGCGDTYQLGHGNQEHVRQPKLIE 714
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGS 349
G SE+ V VS G +H A+ ++ + WG S
Sbjct: 715 G-LSETVVSDVSVGAQHCVALTTDSDVYAWGKNSS 748
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 148/341 (43%), Gaps = 63/341 (18%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKN 150
V+ GLND QLG + P+ L + +Q + G S ++ DG+++ G+
Sbjct: 2926 VFVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFACGEG 2985
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGR 208
S+G+LG+G A I +P ++ LS ++ A+ +AVT GKV SWG G G+
Sbjct: 2986 SSGRLGIGGFAN--IRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQYGQ 3043
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S+ + R P++I+ + ++ + G HSA + NG ++ +G A
Sbjct: 3044 LGHG---SLQSYDR------PKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADG 3094
Query: 269 KMLFQEGNHARRPSLISGGE-----------------------LYTWGSNENGCLGI--- 302
++ + N+ +P L+ E L+ WG G LG+
Sbjct: 3095 RLGHGDSNNQTKPKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGLKDG 3154
Query: 303 -GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 360
S DV VQ S + Q+ CG + ++ EGK+ TWG G +
Sbjct: 3155 SSSTDV-----PVQVITFPSNIIQIECGMHFSVLLTKEGKVYTWGKGEYYRL-------- 3201
Query: 361 GGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHTGAL 399
GND + PT+V+ + QV+ G H AL
Sbjct: 3202 ------GNDSTSVQPIPTLVDGLASKTITQVAVGALHCLAL 3236
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 107/228 (46%), Gaps = 22/228 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G LG+G+ ES+ P +A + ++ G H+ +TE G +Y G +G+
Sbjct: 532 WGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTEDGVLYTWGKGSYGR 591
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG N L P + GL ++VQ+ +G H+ A+ G+++ WG G+LG
Sbjct: 592 LG-HGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTGQVWSWGDGDYGKLGRPG 650
Query: 160 KAAKVIPIPTKVECLSGIFTKQAAL----GFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+P P +SGI + + G + S+A+T GK+ SWG G + +LGHG +
Sbjct: 651 SDQNKVPKP-----ISGIGSTSPVVKIICGNQISMALTKDGKLYSWGCGDTYQLGHGNQE 705
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+LI+ L V + G H + + VY +G
Sbjct: 706 HV---------RQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYAWG 744
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 112/261 (42%), Gaps = 56/261 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
++++WG N QLG AKV P + L+ + Q A G + S V+ GKV +
Sbjct: 2924 NKVFVWGLNDMRQLGTDLSEAKV-KSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFAC 2982
Query: 202 GAGGSGRLGHGQESSILGF--LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
G G SGRLG G ++I + S S Y R KV ++ AG H + +G+V
Sbjct: 2983 GEGSSGRLGIGGFANIRMPHQISSLSMYVVR--------KVAVSCAG-RHVLAVTADGKV 3033
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
++WG + G LG GS+ P+ ++ F
Sbjct: 3034 ------------------------------FSWGDGQYGQLGHGSLQSYDRPKMIE-IFQ 3062
Query: 320 ESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
+ +VSCG H+AA+S G++ TWG G G+LGHG+ + P +V
Sbjct: 3063 AKHIREVSCGTGHSAAVSVNGELFTWGQGAD------------GRLGHGDSNNQTKPKLV 3110
Query: 379 NFGENVKALQVSCGFNHTGAL 399
E V+ V+CG + L
Sbjct: 3111 RALEKVRISCVACGSRNAHTL 3131
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 7/161 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-KHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G E P + KH +K L CG ++ LT G VY G D+
Sbjct: 4053 WGDGDYGKLGRGGNEGSKVPKKIDSLTGKHVIK-LLCGSQFSMALTTAGHVYTWGKGDYY 4111
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG ++ + P R+ GL + V+ I G H T G+++ WG N GQ +G
Sbjct: 4112 RLGHGDD-SHQRTPRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWGDNDEGQ--IGN 4168
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
+ + +P ++ I A G S+A + + LS
Sbjct: 4169 DTTQAVSVPKRINITDNICIDHVACGSAHSIAWSSKQRNLS 4209
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 91/199 (45%), Gaps = 40/199 (20%)
Query: 225 SEYTPRLIKELEGVKVKIAAAGFL----HSACIDENGRVYI-----FGDRAVDKMLFQ-- 273
SE P +I + + ++I A F H + +G V+ GD V+++ F
Sbjct: 447 SEGGPSII-QTSNILLEIGAKEFYSSPKHRVVLTVHGTVFYVMDASMGDFTVEQLFFPGD 505
Query: 274 ----------EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
GNH +L G++Y+WG NG LGIG+ + +P V S +
Sbjct: 506 EEIIQIDHNPSGNHIL--ALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAA-LSGDRI 562
Query: 324 DQVSCGWKHTAAISEGKIL-TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 382
+S G H+AA++E +L TWG G S G+LGHGN D + PTIV
Sbjct: 563 VHISAGSMHSAAVTEDGVLYTWGKG------------SYGRLGHGNAEDKLIPTIVEGLN 610
Query: 383 NVKALQVSCGF--NHTGAL 399
VK +QV CG HT AL
Sbjct: 611 GVKIVQVDCGSGDAHTLAL 629
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 104/250 (41%), Gaps = 51/250 (20%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++ WG N GQLG G + KV P E LS + G + AVT GKV + G
Sbjct: 3836 VFGWGHNHRGQLG-GIEGNKV-KSPRLCESLSELNPAMITGGEQTLFAVTDDGKVYASGY 3893
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
GRLG G ++ + TP G+ VK A +HS
Sbjct: 3894 AAHGRLGIGSSDNV-------ATPTPLTSLATRGIAVKKIA---IHSG------------ 3931
Query: 264 DRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
G H ++ + GELY WG E+G LG+G+ ++ P ++ S+ +
Sbjct: 3932 -----------GKHCL--AVTTQGELYAWGEGEDGKLGLGTTVNMNVPHLIESLKSKHVI 3978
Query: 324 DQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 382
D CG H+A I+ +G + TWG G G+LGH + P +V+ +
Sbjct: 3979 D-AGCGSSHSACITDDGSLYTWGKG------------RYGRLGHNDHETQHKPKLVSALK 4025
Query: 383 NVKALQVSCG 392
+ V+CG
Sbjct: 4026 GEQVTCVACG 4035
>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
[Ornithorhynchus anatinus]
Length = 4866
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 104/322 (32%), Positives = 159/322 (49%), Gaps = 46/322 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4057 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4116
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+++ +G G+LGLG
Sbjct: 4117 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKMFTFGNGDYGRLGLGN 4175
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV T G V ++G G G+LG G
Sbjct: 4176 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGN----- 4228
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4229 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4284
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV-- 314
R ++ S G++Y WGSN G LG+G + + P +
Sbjct: 4285 NRPQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQLGLGHTNHVREPTLITV 4344
Query: 315 -QGPFSESPVDQVSCGWKHTAA 335
QG + Q+S G H+AA
Sbjct: 4345 LQG----KNIRQISAGRCHSAA 4362
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 127/245 (51%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4111 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKMFTFGNGDYGR 4170
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4171 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNS 4229
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4230 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4279
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ + L GV ++ A G H+ I G VY +G + ++ NH R
Sbjct: 4280 -RARNHNRPQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQLGLGHTNHVRE 4338
Query: 281 PSLIS 285
P+LI+
Sbjct: 4339 PTLIT 4343
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 168/363 (46%), Gaps = 66/363 (18%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSL-------------------------- 627
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
+L S G++Y WG CLG GS + ++ + + + +S G H A+S
Sbjct: 628 ----ALTSTGQVYAWGC--GACLGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALS 681
Query: 338 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI-HPTIVNFGENVKALQVSCGFNH 395
+ ++ W G++S GQ G GN I P V+ + V Q+S G +H
Sbjct: 682 HDNEVYAW------------GNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSH 729
Query: 396 TGA 398
+ A
Sbjct: 730 SLA 732
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 138/321 (42%), Gaps = 60/321 (18%)
Query: 83 TLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
T ++ET VY G N QL G E I L+P +++ + I G + + I+
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVIST 420
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVL 199
DG + GK S G+LGLG + E I ++ G + ++A T G+V
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 481 SWGDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG- 530
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
ELYTWG + G LG G + + P V+
Sbjct: 531 -----------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK--- 558
Query: 319 SESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 559 DISNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVI 608
Query: 379 NFGENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 609 EALQGMFIRKVCAGSQSSLAL 629
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 143/309 (46%), Gaps = 52/309 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
LR P+L++EL ++ + G H C+
Sbjct: 654 LR------PKLVEELAATRIVDISIGDSH--CL--------------------------- 678
Query: 281 PSLISGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKH----TAA 335
+L E+Y WG+N G G G S + P++V G + Q+S G H TA
Sbjct: 679 -ALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSG-LDGVAIQQISAGTSHSLAWTAL 736
Query: 336 ISEGKILTW 344
+ +++ W
Sbjct: 737 PRDRQVVAW 745
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4036 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4093
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4094 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4144
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4145 SCGFKHSAVVTADGKMFTFGN----------GDYGR--------------------LGLG 4174
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4175 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSTDGSMVWAFG--------DGDY--GK 4223
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4224 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4259
>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
rerio]
Length = 4846
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 162/333 (48%), Gaps = 40/333 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + + +CG H++ LTE+G V++ G D+
Sbjct: 4037 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGSDGHSMALTESGEVFSWGDGDY 4096
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4097 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGN 4155
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G V ++G G G+LG G
Sbjct: 4156 TSNK--KLPERVSALEGHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKLGLGN----- 4208
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4209 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYTFGQDRLIGLPEGRARNH 4264
Query: 278 ARR---PSLI------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R P+L S G++Y WGSN G LG+G + + P +
Sbjct: 4265 NRPQQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGLGHTNHVREPTLISA 4324
Query: 317 PFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 349
+ Q+S G H+AA + + G S
Sbjct: 4325 -LQGKNIQQISAGRCHSAAWTAPPVPPRAPGSS 4356
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 128/246 (52%), Gaps = 14/246 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G +++ G D+G+
Sbjct: 4091 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGR 4150
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKK 160
LG+ L P R+S L+ +V Q++ G +H+ A++ DG ++ +G G+LGLG
Sbjct: 4151 LGLGNTSNKKL-PERVSALEGHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKLGLGNS 4209
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4210 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYTFGQDRLIGLPEG-------- 4259
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ + L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4260 -RARNHNRPQQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGLGHTNHVRE 4318
Query: 281 PSLISG 286
P+LIS
Sbjct: 4319 PTLISA 4324
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H ++K ++ HTL T G V++ G D
Sbjct: 423 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRAIKKVSSSKGSDGHTLAFTSEGEVFSWGDGD 481
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A++ DGELY WG+ G+LG G
Sbjct: 482 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHG 541
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 542 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 597
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++++ L+G+ ++ AG S + G+VY +G A E
Sbjct: 598 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 647
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 648 ALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 707
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 708 IG-LDGVAIQQISAGTSHSLAWTALPRDRQVVAW 740
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 362 MVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISSDG 417
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 418 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTSEGEVFSW 477
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 478 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVSEDG--- 525
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 526 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 555
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P +V
Sbjct: 556 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVVEA 605
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 606 LQGMFIRKVCAGSQSSLAL 624
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ ++E G +Y G DFG
Sbjct: 477 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFG 536
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 537 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 593
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P VE L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 594 -TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 648
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL +V + G H + + VY +G+ ++
Sbjct: 649 LR------PKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSM 689
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4016 QVVCGQNCTFVIQANGTVSACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQMVTSC 4073
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4074 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4124
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4125 SCGFKHSAVVTSDGKLFSFGN----------GDYGR--------------------LGLG 4154
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV V QV+CG HT A+S + W +G DG G+
Sbjct: 4155 NTSNKKLPERVSA-LEGHQVGQVACGLNHTLAVSADGMTVWAFG--------DGDY--GK 4203
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4204 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4239
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 581 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 638
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L VV IS G H A++ D E+Y WG NS GQ G G
Sbjct: 639 LGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 698
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L G+ +Q + G S+A T +V++W
Sbjct: 699 GPITK-PKKVIGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 740
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 530 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 587
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P + L+ + ++ G S A+T G++Y WG LG G
Sbjct: 588 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 644
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 645 EATAL-RPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 696
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+GV ++ +AG HS
Sbjct: 697 --STGPITKPKKVIGLDGVAIQQISAGTSHS 725
>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
harrisii]
Length = 4865
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 160/322 (49%), Gaps = 46/322 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4056 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4115
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EV+Q+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4116 GKLG-HGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4174
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4175 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4227
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4228 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4283
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV-- 314
R +L S G++Y WGSN G LG+G + + P +
Sbjct: 4284 NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLITV 4343
Query: 315 -QGPFSESPVDQVSCGWKHTAA 335
QG + Q+S G H+AA
Sbjct: 4344 LQG----KNIRQISAGRCHSAA 4361
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 127/245 (51%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4110 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4169
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4170 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4228
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4229 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4278
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4279 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4337
Query: 281 PSLIS 285
P+LI+
Sbjct: 4338 PTLIT 4342
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A++ DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVSEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4035 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4092
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4093 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVIQM 4143
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4144 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4173
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4174 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4222
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4223 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4258
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L G+ +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+GV ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGVAIQQISAGTSHS 730
>gi|196012194|ref|XP_002115960.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
gi|190581736|gb|EDV21812.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
Length = 897
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 155/359 (43%), Gaps = 67/359 (18%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG G+LGLG ++ + H++K ++CG HT+ L + G +Y+ G ND+
Sbjct: 4 WGKAIEGQLGLGGIDENCILKATHVDLTTNHTIKLISCGLNHTILLLQDGQIYSCGSNDY 63
Query: 101 GQLGISENIGY-----SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
GQ G N + E +RI+ + S G +H+ AI +Y WG NS+GQL
Sbjct: 64 GQTGRQRNNKRFARIDAFESMRITNVS------SNGANHNLAINDKNCIYAWGDNSDGQL 117
Query: 156 GLGKKAAK-VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
G+ + K P +++ LS Q A G S+AV G V SWG+ G+LG
Sbjct: 118 GVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDGTVFSWGSNRYGQLGIDS- 176
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ S P+ I +L G + AAG HS I
Sbjct: 177 --------NVSSVEPKQILKLSGFYIVQIAAGGAHSLAI--------------------- 207
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
+ G L TWG N G LG+G+ D + SP V S+ + +CG HTA
Sbjct: 208 ---------TNSGALLTWGKNSFGQLGLGTNDGVLSPTCVSSLRSQH-IAYAACGEDHTA 257
Query: 335 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
++ EG + T+G G S GQLGH + + P +V + Q++CG
Sbjct: 258 VLTKEGGVFTFGAG------------SSGQLGHNSLSHHCSPQMVVDLMGIVVTQITCG 304
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 113/274 (41%), Gaps = 55/274 (20%)
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI-FTKQAALGF 186
IS G +H+ + DG++Y G N GQ G + + +++ + T ++ G
Sbjct: 39 ISCGLNHTILLLQDGQIYSCGSNDYGQTGRQRNNKRF----ARIDAFESMRITNVSSNGA 94
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
++A+ + +WG G+LG + ++ F R TPR IK L V A G
Sbjct: 95 NHNLAINDKNCIYAWGDNSDGQLG-VTDQNLKQFYR-----TPRQIKSLSKFAVVQVACG 148
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSID 306
HS + I+ G +++WGSN G LGI S
Sbjct: 149 QSHSLAV------------------------------INDGTVFSWGSNRYGQLGIDSNV 178
Query: 307 VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 365
P+++ S + Q++ G H+ AI+ G +LTWG +S GQLG
Sbjct: 179 SSVEPKQIL-KLSGFYIVQIAAGGAHSLAITNSGALLTWG------------KNSFGQLG 225
Query: 366 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G + + PT V+ + +CG +HT L
Sbjct: 226 LGTNDGVLSPTCVSSLRSQHIAYAACGEDHTAVL 259
>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1139
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 178/391 (45%), Gaps = 68/391 (17%)
Query: 50 RLGLGSLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYATGLNDFGQLG-- 104
R+G SLE + ++ A E ++ +ACGG H + +T+ G ++ G G+LG
Sbjct: 323 RVG-SSLEIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHG 381
Query: 105 ISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
+ N+ + P I L ++ ++ G +HS A+T+ G+LY WGK G LG G + +
Sbjct: 382 VDSNVQH---PKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSH 438
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+P + GI A G + VT G++ ++G G G LGHG S+
Sbjct: 439 WVPKRVNF-LMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV------ 491
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDE------------NGRVYIFGDRAVDKM- 270
+ PR + L+G++ AA G H+A + E +G+++ +GD ++
Sbjct: 492 ---FIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLG 548
Query: 271 --------------LFQEGN-------HARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
E N H+ +L + G +YT GS G LG D
Sbjct: 549 HGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADG-K 607
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
P RV G +S V++++CG H A + S ++ TWG G S G+LGHG+
Sbjct: 608 VPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKG------------SNGRLGHGD 655
Query: 369 DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
D PT+V ++ + ++CG N T A+
Sbjct: 656 ADDRNSPTLVESLKDKQVKSIACGSNFTAAV 686
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 76/152 (50%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G E + P +A + + +ACG + T+ LT +G VY G +GQ
Sbjct: 539 WGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 598
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG G P R+ G K V +I+ G +H + +T E+Y WGK SNG+LG G
Sbjct: 599 LGNPHADGKV--PTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGD- 655
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
A PT VE L K A G + AV
Sbjct: 656 -ADDRNSPTLVESLKDKQVKSIACGSNFTAAV 686
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 117/272 (43%), Gaps = 62/272 (22%)
Query: 142 GELYMWGKNS--------NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G+++MWG+ N ++G + +P +E + + A G + +V VT
Sbjct: 303 GDVFMWGEGIGEGVLGGGNHRVGSSLEIKMDSLLPKALESTIVLDVQNIACGGQHAVLVT 362
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+ SWG GRLGHG +S++ P+LI L +++ A G HS +
Sbjct: 363 KQGESFSWGEESEGRLGHGVDSNV---------QHPKLIDALNTTNIELVACGEYHSCAV 413
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH-SPE 312
G+LYTWG + G LG G+ +V H P+
Sbjct: 414 ------------------------------TLSGDLYTWGKGDFGILGHGN-EVSHWVPK 442
Query: 313 RVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
RV V ++CG HTA + S G++ T+G GTF G LGHG+
Sbjct: 443 RVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFG----DGTF--------GVLGHGDRKS 490
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
P V+ + ++ ++ +CG HT A++E +
Sbjct: 491 VFIPREVDSLKGLRTVRAACGVWHTAAVVEVM 522
>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
domestica]
Length = 4790
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 160/322 (49%), Gaps = 46/322 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 3981 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4040
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EV+Q+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4041 GKLG-HGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4099
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4100 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4152
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4153 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4208
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV-- 314
R +L S G++Y WGSN G LG+G + + P +
Sbjct: 4209 NRPQQIPVLAGVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLITI 4268
Query: 315 -QGPFSESPVDQVSCGWKHTAA 335
QG + Q+S G H+AA
Sbjct: 4269 LQG----KNIRQISAGRCHSAA 4286
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 127/245 (51%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4035 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4094
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4095 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4153
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4154 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4203
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4204 -RARNHNRPQQIPVLAGVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4262
Query: 281 PSLIS 285
P+LI+
Sbjct: 4263 PTLIT 4267
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 3960 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4017
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4018 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVIQM 4068
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4069 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4098
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4099 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4147
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4148 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4183
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L G+ +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+GV ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGVAIQQISAGTSHS 730
>gi|330802866|ref|XP_003289433.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
gi|325080475|gb|EGC34029.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
Length = 1719
Score = 124 bits (311), Expect = 9e-26, Method: Composition-based stats.
Identities = 113/405 (27%), Positives = 174/405 (42%), Gaps = 107/405 (26%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-KHSLK--ALACGGAHTLFLTETGCVYATGLND 99
WG+G G+LG G+LES P + FE K SL+ ++A GG HT+ LT G VY+ G ND
Sbjct: 185 WGDGLLGKLGHGTLESYSEPRLVEFFETKPSLRVVSVANGGKHTVALTVCGNVYSFGGND 244
Query: 100 FGQLGI-----------------------------------SENIGYSLEPLRISGLKKE 124
QLG+ S + ++ + + S
Sbjct: 245 SCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSSPIIMSNSTSTLFNKQQQQSSNKIDR 304
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
++++S + S+AI+ G LY WG+ NG+LG G + P +V L G +L
Sbjct: 305 IIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQ--STPKQVMSLHGHTIVDMSL 362
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G S+A+T G+V SWG G +G+LGHG +S + TP+ I+ + +K+ +
Sbjct: 363 GGGHSMALTKRGEVFSWGRGENGQLGHGTFTS--------QQMTPKQIQAFQNKTIKVIS 414
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGI-G 303
AG HS ID N G ++ WG + G LG+
Sbjct: 415 AGGYHSIAIDTN------------------------------GSMFAWGRGDYGVLGVSS 444
Query: 304 SIDVL---HSPERVQGPFSESPVD-----------QVSCGWKHTAAISE-GKILTWGWGG 348
S+D L +SP ++ + + + VS G++H A +E G + +WG G
Sbjct: 445 SLDSLGDINSPVLIKSLNNSNGSNNSNSSAGERFINVSSGFQHNVAQTENGDLYSWGCG- 503
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN-FGENVKALQVSCG 392
SG +LG N+ + + P +N N K SCG
Sbjct: 504 -----------SGNRLGLANEENQLIPKKLNDRSNNSKPAFFSCG 537
Score = 88.2 bits (217), Expect = 7e-15, Method: Composition-based stats.
Identities = 81/319 (25%), Positives = 127/319 (39%), Gaps = 80/319 (25%)
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE--- 124
F K + ++ G HT +T+ G +Y G G+LG YS EP + + +
Sbjct: 158 FLKEKVVFISTGAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYS-EPRLVEFFETKPSL 216
Query: 125 -VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV------------ 171
VV ++ G H+ A+TV G +Y +G N + QLGLG ++ P V
Sbjct: 217 RVVSVANGGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSN 276
Query: 172 --------ECLSGIFTKQA-------------ALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
S +F KQ + +S A++ G + +WG G +GRLG
Sbjct: 277 SSSPIIMSNSTSTLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLG 336
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
HG S + TP+ + L G + + G HS
Sbjct: 337 HGD---------SLMQSTPKQVMSLHGHTIVDMSLGGGHSM------------------- 368
Query: 271 LFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCG 329
+L GE+++WG ENG LG G+ +P+++Q F + +S G
Sbjct: 369 -----------ALTKRGEVFSWGRGENGQLGHGTFTSQQMTPKQIQA-FQNKTIKVISAG 416
Query: 330 WKHTAAI-SEGKILTWGWG 347
H+ AI + G + WG G
Sbjct: 417 GYHSIAIDTNGSMFAWGRG 435
Score = 84.7 bits (208), Expect = 8e-14, Method: Composition-based stats.
Identities = 84/292 (28%), Positives = 132/292 (45%), Gaps = 32/292 (10%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP-IPTKVECLS 175
RI LK++VV ISTG H+S IT G LY WG G+LG G + P + E
Sbjct: 155 RIDFLKEKVVFISTGAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETKP 214
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
+ A G + +VA+T G V S+G S +LG LG + S+ TP+L+
Sbjct: 215 SLRVVSVANGGKHTVALTVCGNVYSFGGNDSCQLG-------LGNISSSYYSTPQLVTFQ 267
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDR------AVDKMLFQEGNHARRPSLISGGEL 289
+ + + S I N +F + +D+++ + R ++ G L
Sbjct: 268 SPQSLSNSNS---SSPIIMSNSTSTLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGYL 324
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGG 348
YTWG +NG LG G + +P++V + VD +S G H+ A+++ G++ +WG G
Sbjct: 325 YTWGRGDNGRLGHGDSLMQSTPKQVMSLHGHTIVD-MSLGGGHSMALTKRGEVFSWGRG- 382
Query: 349 SHGTFSEDGHSSGGQLGHGN-DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
GQLGHG + P + +N +S G H+ A+
Sbjct: 383 -----------ENGQLGHGTFTSQQMTPKQIQAFQNKTIKVISAGGYHSIAI 423
Score = 80.5 bits (197), Expect = 1e-12, Method: Composition-based stats.
Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 32/241 (13%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
L+C + +++ G +Y G D G+LG +++ S +S +V +S G HS
Sbjct: 308 LSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQSTPKQVMSLHGHTIVDMSLGGGHS 367
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+T GE++ WG+ NGQLG G ++ + P +++ K + G S+A+
Sbjct: 368 MALTKRGEVFSWGRGENGQLGHGTFTSQQM-TPKQIQAFQNKTIKVISAGGYHSIAIDTN 426
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE------------GVKVKIA 243
G + +WG G G LG LG + S P LIK L G +
Sbjct: 427 GSMFAWGRGDYGVLGVSSSLDSLGDINS-----PVLIKSLNNSNGSNNSNSSAGERFINV 481
Query: 244 AAGFLHSACIDENGRVYIFG-------------DRAVDKMLFQEGNHARRPSLISGGELY 290
++GF H+ ENG +Y +G ++ + K L N++ +P+ S GE+
Sbjct: 482 SSGFQHNVAQTENGDLYSWGCGSGNRLGLANEENQLIPKKLNDRSNNS-KPAFFSCGEII 540
Query: 291 T 291
T
Sbjct: 541 T 541
>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
Length = 368
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 156/342 (45%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL + +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE--------FPSQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AAG HS + +G V + WG N G
Sbjct: 192 LAQVAAGGAHSFALSLSGAV------------------------------FGWGMNNAGQ 221
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ SP V+ V +SCG +HTA +++ G + T+G G
Sbjct: 222 LGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAG----------- 269
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT A +
Sbjct: 270 -SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 419
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 173/381 (45%), Gaps = 79/381 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRP------VVCSAFEKH-------SLKALACGGAHTLFLTET 89
+G D G+LG G+ + RP V S F + + A++CG HT+ LT +
Sbjct: 11 FGCNDDGQLGTGA---KRRPTLAIDDVSASNFPQQIGNLPDEDIVAVSCGSRHTMALTSS 67
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYM 146
G VY+ G GQLG ++ EP +I+ ++E ++ IS G HS+A+T DG LY+
Sbjct: 68 GAVYSWGWGSMGQLG-HGDLKIINEPQKIAFFEQERLEVDYISCGGCHSAAVTKDGTLYV 126
Query: 147 WGKNSNGQLGLGKK---AAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
WG++ GQLGL K+ A + +P+ + E +G + + G + A+T G+V WG
Sbjct: 127 WGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSFGRVYVWG 186
Query: 203 AGGSGRLGHG-------QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G SG+LG G + S++G R P L+K G KV A G HSA + E
Sbjct: 187 RGDSGQLGIGSVWMKDPENESLMGASR------PHLLKAFNGEKVVQVACGAFHSAAVTE 240
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G VY+ WG + G LG+G P+R++
Sbjct: 241 QGHVYV------------------------------WGKEDYGMLGVGQSSDQQIPKRLE 270
Query: 316 GPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
F + PV +VSCG HT +++ G G G+LG G+ P
Sbjct: 271 Y-FDDIPVLRVSCGGWHTVVVAKS-----------GDCYAFGRGEYGRLGLGDTKSRTRP 318
Query: 376 TIVNFGENVKALQVSCGFNHT 396
+V + +Q +CG +HT
Sbjct: 319 HLVKALKGKTVIQAACGGSHT 339
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 136/312 (43%), Gaps = 61/312 (19%)
Query: 42 LWGNGDYGRLGLG---SLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYAT 95
+WG +G+LGL PV C E ++ ++CGG HT LT G VY
Sbjct: 126 VWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSFGRVYVW 185
Query: 96 GLNDFGQLGI---------SENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELY 145
G D GQLGI +E++ + P + E VVQ++ G HS+A+T G +Y
Sbjct: 186 GRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAAVTEQGHVY 245
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
+WGK G LG+G+ + + IP ++E I + + G +V V G ++G G
Sbjct: 246 VWGKEDYGMLGVGQSSDQ--QIPKRLEYFDDIPVLRVSCGGWHTVVVAKSGDCYAFGRGE 303
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
GRLG G + S P L+K L+G V AA G H+ + +G Y+ G
Sbjct: 304 YGRLGLGD---------TKSRTRPHLVKALKGKTVIQAACGGSHTLFVTSDGTAYVAG-- 352
Query: 266 AVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ-GPFSESPVD 324
RP ++G LG+ + L P R+ GP PV
Sbjct: 353 --------------RP--------------DHGRLGLADMKALGVPTRLDLGPI---PVR 381
Query: 325 QVSCGWKHTAAI 336
Q S G H+ A+
Sbjct: 382 QFSAGGAHSVAL 393
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 26/132 (19%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP---VDQVSCGWKHTAAISE 338
+L S G +Y+WG G LG G + +++ P+++ F E VD +SCG H+AA+++
Sbjct: 63 ALTSSGAVYSWGWGSMGQLGHGDLKIINEPQKIA--FFEQERLEVDYISCGGCHSAAVTK 120
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV--------NFGENVKALQVS 390
L + WG SH GQLG + + H ++ GE + ++VS
Sbjct: 121 DGTL-YVWGESHW----------GQLGLPKEYEAAHESLPVKCPMPEGEAGETI--VKVS 167
Query: 391 CGFNHTGALLEY 402
CG HT AL +
Sbjct: 168 CGGTHTAALTSF 179
>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1105
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 175/386 (45%), Gaps = 67/386 (17%)
Query: 55 SLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENI 109
SLE + ++ A E ++ +ACGG H + +T+ G ++ G G+LG + N+
Sbjct: 293 SLEIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNV 352
Query: 110 GYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
+ P I L ++ ++ G +HS A+T+ G+LY WGK G LG G + + +P
Sbjct: 353 QH---PKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKR 409
Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
+ GI A G + VT G++ ++G G G LGHG S+ +
Sbjct: 410 VNF-LMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV---------FI 459
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDE------------NGRVYIFGDRAVDKM------ 270
PR + L+G++ AA G H+A + E +G+++ +GD ++
Sbjct: 460 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKE 519
Query: 271 ---------LFQEGN-------HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
E N H+ +L + G +YT GS G LG D P RV
Sbjct: 520 PKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADG-KVPTRV 578
Query: 315 QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
G +S V++++CG H A + S ++ TWG G S G+LGHG+ D
Sbjct: 579 DGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKG------------SNGRLGHGDADDRN 626
Query: 374 HPTIVNFGENVKALQVSCGFNHTGAL 399
PT+V ++ + ++CG N T A+
Sbjct: 627 SPTLVESLKDKQVKSIACGSNFTAAV 652
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 76/152 (50%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G E + P +A + + +ACG + T+ LT +G VY G +GQ
Sbjct: 505 WGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 564
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG G P R+ G K V +I+ G +H + +T E+Y WGK SNG+LG G
Sbjct: 565 LGNPHADGKV--PTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGD- 621
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
A PT VE L K A G + AV
Sbjct: 622 -ADDRNSPTLVESLKDKQVKSIACGSNFTAAV 652
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 117/272 (43%), Gaps = 62/272 (22%)
Query: 142 GELYMWGKNS--------NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G+++MWG+ N ++G + +P +E + + A G + +V VT
Sbjct: 269 GDVFMWGEGIGEGVLGGGNHRVGSSLEIKMDSLLPKALESTIVLDVQNIACGGQHAVLVT 328
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+ SWG GRLGHG +S++ P+LI L +++ A G HS +
Sbjct: 329 KQGESFSWGEESEGRLGHGVDSNV---------QHPKLIDALNTTNIELVACGEYHSCAV 379
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH-SPE 312
G+LYTWG + G LG G+ +V H P+
Sbjct: 380 ------------------------------TLSGDLYTWGKGDFGILGHGN-EVSHWVPK 408
Query: 313 RVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
RV V ++CG HTA + S G++ T+G GTF G LGHG+
Sbjct: 409 RVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFG----DGTF--------GVLGHGDRKS 456
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
P V+ + ++ ++ +CG HT A++E +
Sbjct: 457 VFIPREVDSLKGLRTVRAACGVWHTAAVVEVM 488
>gi|408500311|ref|YP_006864230.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
asteroides PRL2011]
gi|408465135|gb|AFU70664.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
asteroides PRL2011]
Length = 1160
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 122/407 (29%), Positives = 179/407 (43%), Gaps = 65/407 (15%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCS----AFEKHSLKALACGGAHTLFLTETGCVYAT 95
A WG +YG+LG G+L R +PV+ A + ++ G +L + G VYA
Sbjct: 688 AYAWGRNNYGQLGDGTLTQRNKPVIVKKPAGASADFTYVQVSAGDEQSLAVGSDGYVYAW 747
Query: 96 GLNDFGQLGISENIGYSLEPLRI-------SGLKKEVVQISTGYHHSSAITVDGELYMWG 148
G N+ GQLG + GYS PLR+ SGL VQ+S GY+HS A+ G ++ WG
Sbjct: 748 GNNESGQLGNGSSGGYSTVPLRVIDPNDPRSGLT--AVQVSAGYYHSLALDARGNIWAWG 805
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSG 207
N G+LG G IP + +G T Q + GF + A+ G SWG G
Sbjct: 806 FNQFGELGNGNNINSAIPTLAQYPRDAGTVTAIQVSGGFHHTAAIDTKGNTWSWGWNWFG 865
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LG+G ++I + +Y PR + ++V +AG HS ID G + +G +
Sbjct: 866 QLGNG--NNIDSAIPVPVQY-PRDAGTVRAIQV---SAGADHSLIIDTKGNTWAWGWNQL 919
Query: 268 DKMLFQEGNHARRP---------------------------SLISGGELYTWGSNENGCL 300
++ + P ++ G + WG N++G L
Sbjct: 920 GELGNGSSSADANPVPGMVKYPENAGTVTAIQVSAGGYHSLAIDKNGNAWAWGGNDSGEL 979
Query: 301 GIGSIDVLHSPERVQGPFSESPVD--QVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDG 357
GIG+ P VQ P + V QVS G H+ I EGK TW W G
Sbjct: 980 GIGTTSKSEIPALVQYPKNAGAVTTVQVSAGGYHSLGIDKEGK--TWAW----------G 1027
Query: 358 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL-LEYV 403
++ GQLG+G + PT V F N+ + S F+ + A L Y+
Sbjct: 1028 YNQFGQLGNGTISNSSIPTPVAF--NLSQVISSVTFDTSPATNLNYI 1072
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 151/354 (42%), Gaps = 58/354 (16%)
Query: 83 TLFLTETGCVYATGLNDFGQLG----ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
TL + G YA G N++GQLG N ++ + VQ+S G S A+
Sbjct: 679 TLAVGSDGNAYAWGRNNYGQLGDGTLTQRNKPVIVKKPAGASADFTYVQVSAGDEQSLAV 738
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV----ECLSGIFTKQAALGFEQSVAVTG 194
DG +Y WG N +GQLG G +P +V + SG+ Q + G+ S+A+
Sbjct: 739 GSDGYVYAWGNNESGQLGNGSSGGYST-VPLRVIDPNDPRSGLTAVQVSAGYYHSLALDA 797
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G + +WG G LG+G ++I + + ++Y PR + ++V + GF H+A ID
Sbjct: 798 RGNIWAWGFNQFGELGNG--NNINSAIPTLAQY-PRDAGTVTAIQV---SGGFHHTAAID 851
Query: 255 ENGRVYIFG---------DRAVDKMLFQEGNHARRP--------------SLI--SGGEL 289
G + +G +D + + R SLI + G
Sbjct: 852 TKGNTWSWGWNWFGQLGNGNNIDSAIPVPVQYPRDAGTVRAIQVSAGADHSLIIDTKGNT 911
Query: 290 YTWGSNENGCLGIG--SIDVLHSPERVQGPFSESPVD--QVSCGWKHTAAISEGKILTWG 345
+ WG N+ G LG G S D P V+ P + V QVS G H+ AI + W
Sbjct: 912 WAWGWNQLGELGNGSSSADANPVPGMVKYPENAGTVTAIQVSAGGYHSLAIDKNGN-AWA 970
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN---VKALQVSCGFNHT 396
WGG + G+LG G P +V + +N V +QVS G H+
Sbjct: 971 WGG----------NDSGELGIGTTSKSEIPALVQYPKNAGAVTTVQVSAGGYHS 1014
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 69/168 (41%), Gaps = 54/168 (32%)
Query: 285 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD----QVSCGWKHTAAI-SEG 339
S G Y WG N G LG G++ + P V+ P S D QVS G + + A+ S+G
Sbjct: 684 SDGNAYAWGRNNYGQLGDGTLTQRNKPVIVKKPAGAS-ADFTYVQVSAGDEQSLAVGSDG 742
Query: 340 KILTWG-------WGGSHGTFS--------EDGHSSG----------------------- 361
+ WG GS G +S + SG
Sbjct: 743 YVYAWGNNESGQLGNGSSGGYSTVPLRVIDPNDPRSGLTAVQVSAGYYHSLALDARGNIW 802
Query: 362 -------GQLGHGNDVDYIHPTIVNFGEN---VKALQVSCGFNHTGAL 399
G+LG+GN+++ PT+ + + V A+QVS GF+HT A+
Sbjct: 803 AWGFNQFGELGNGNNINSAIPTLAQYPRDAGTVTAIQVSGGFHHTAAI 850
>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
Length = 1046
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 167/367 (45%), Gaps = 70/367 (19%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ G+LG+G+ E S + P C F+ LK +ACG H+LFL G VY G N G
Sbjct: 5 WGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCG 64
Query: 102 QLG------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
QLG E +G +L+ +ISG +S G HS A+ G+++ WG GQL
Sbjct: 65 QLGHDKGGSRPELVG-ALDAQKISG-------VSCGQAHSLAVNEQGQVFAWGAGDGGQL 116
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-E 214
GLG A + + +P ++ L Q G +A++ G++ WG SG+LG G+ E
Sbjct: 117 GLG-TAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGE 175
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S L +P+ +K L G+ + +AG HS + +G V FG
Sbjct: 176 PSTL---------SPQPLKSLCGIPLTQISAGGDHSFALSFSGAV--FG----------- 213
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
WG N G LG+ P ++ S+ V +SCG +HTA
Sbjct: 214 -----------------WGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVV-YISCGEEHTA 255
Query: 335 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 393
A++ EG + T+G G S GQLGH + + P V + Q++CG
Sbjct: 256 ALTKEGGLFTFGNG------------SKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGR 303
Query: 394 NHTGALL 400
NHT A +
Sbjct: 304 NHTLAFV 310
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 91/174 (52%), Gaps = 6/174 (3%)
Query: 42 LWGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+WG G+LGLG E S P + L ++ GG H+ L+ +G V+ G N
Sbjct: 160 VWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSA 219
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+++ ++ P I L+ ++VV IS G H++A+T +G L+ +G S GQ LG
Sbjct: 220 GQLGLNDEQDRAV-PCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQ--LGH 276
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
+ + P+P +V L G Q A G ++A V G + ++G G+LG G
Sbjct: 277 DSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTG 330
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 105/266 (39%), Gaps = 74/266 (27%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG+ G+G+LG G + S + PR +G +K A G HS + +G
Sbjct: 2 MLCWGSSGAGQLGIGASEA--------SVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDG 53
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSL--------ISG--------------GELYTWGSN 295
VY G + ++ +G RP L ISG G+++ WG+
Sbjct: 54 SVYTCGSNSCGQLGHDKG--GSRPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAG 111
Query: 296 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG--------- 345
+ G LG+G+ + R+ E + QV CG H A+S +G++ WG
Sbjct: 112 DGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGL 171
Query: 346 -------------------------WGGSHG---TFSED----GHSSGGQLGHGNDVDYI 373
GG H +FS G +S GQLG ++ D
Sbjct: 172 GKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRA 231
Query: 374 HPTIVNFGENVKALQVSCGFNHTGAL 399
P + F + K + +SCG HT AL
Sbjct: 232 VPCHIKFLRSQKVVYISCGEEHTAAL 257
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGL + R P + ++CG HT LT+ G ++ G GQ
Sbjct: 214 WGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG L P R+ L EV QI+ G +H+ A + G +Y +G N+ GQLG G +
Sbjct: 274 LGHDSTRNEPL-PRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTGIR 332
Query: 161 AAKVIPIPT---KVECLSGIFTK 180
+ P+P + C+ +T+
Sbjct: 333 GSAKSPVPVSNIQPLCIGNAYTR 355
>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Callithrix jacchus]
Length = 1050
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 159/342 (46%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AAG HS + +G V FG WG N G
Sbjct: 192 LAQVAAGGAHSFALSLSGAV--FG----------------------------WGMNNAGQ 221
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ SP V+ ++ V +SCG +HTA +++ G + T+G G
Sbjct: 222 LGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG----------- 269
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT A +
Sbjct: 270 -SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|428174549|gb|EKX43444.1| hypothetical protein GUITHDRAFT_61168, partial [Guillardia theta
CCMP2712]
Length = 308
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 115/231 (49%), Gaps = 21/231 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G ++ P A EK A GG H+L LTE VYA G N FGQ
Sbjct: 76 WGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHSLVLTEANKVYAFGSNVFGQ 135
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + YS P +S L++ V I+ GY HS A+ +LY WG+N GQLGLG
Sbjct: 136 LGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALLKSEQLYSWGRNDCGQLGLGHYR 195
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT----GGG-----KVLSWGAGGSGRLGHG 212
+ P+P + +Q + G++ ++A G G KV +WG G G+LGH
Sbjct: 196 SS--PVPEHLTMFKKSQVQQISCGYDHNIAFVSEYAGPGVPPLEKVYTWGRGEEGQLGHD 253
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ S P++++ L ++ AAG SA IDE ++Y +G
Sbjct: 254 E---------LYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQLYTWG 295
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 135/319 (42%), Gaps = 73/319 (22%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLG----ISENIGYSLEPLRISGLKKEVVQISTGY 132
ACG HT+ LTE G VY+ G + G LG S+ + +L+ I + + I+ G
Sbjct: 4 ACGKLHTVALTEEGRVYSWGCAN-GALGHGNSKSQLLPKALDRPLIYSMP-SITTIACGE 61
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
H+ A+ DG L+ WG+N GQLG G K +P +VE L +AA G + S+ +
Sbjct: 62 FHTLAVGQDGTLWTWGRNQYGQLGHGD--CKTHKLPRRVEALEKKICIKAAAGGQHSLVL 119
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT--PRLIKELEGVKVKIAAAGFLHS 250
T KV ++G+ G+LG L S +Y+ P ++ L V G+ HS
Sbjct: 120 TEANKVYAFGSNVFGQLG----------LESKVKYSAAPDIVSRLRRSGVCHITCGYSHS 169
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHS 310
+L+ +LY+WG N+ G LG+G
Sbjct: 170 M------------------------------ALLKSEQLYSWGRNDCGQLGLGHYRSSPV 199
Query: 311 PERVQGPFSESPVDQVSCGWKHTAA-ISE---------GKILTWGWGGSHGTFSEDGHSS 360
PE + F +S V Q+SCG+ H A +SE K+ TWG G
Sbjct: 200 PEHLT-MFKKSQVQQISCGYDHNIAFVSEYAGPGVPPLEKVYTWGRG------------E 246
Query: 361 GGQLGHGNDVDYIHPTIVN 379
GQLGH P +V
Sbjct: 247 EGQLGHDELYSRCVPKVVQ 265
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 114/280 (40%), Gaps = 53/280 (18%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-KQAAL 184
V + G H+ A+T +G +Y WG +NG LG G ++++P + + + A
Sbjct: 1 VGAACGKLHTVALTEEGRVYSWG-CANGALGHGNSKSQLLPKALDRPLIYSMPSITTIAC 59
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G ++AV G + +WG G+LGHG + PR ++ LE AA
Sbjct: 60 GEFHTLAVGQDGTLWTWGRNQYGQLGHGD---------CKTHKLPRRVEALEKKICIKAA 110
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGS 304
AG HS + E +VY FG SN G LG+ S
Sbjct: 111 AGGQHSLVLTEANKVYAFG------------------------------SNVFGQLGLES 140
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL 364
+ + S V ++CG+ H+ A+ + + L + W G + GQL
Sbjct: 141 KVKYSAAPDIVSRLRRSGVCHITCGYSHSMALLKSEQL-YSW----------GRNDCGQL 189
Query: 365 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL-EYV 403
G G+ P + + + Q+SCG++H A + EY
Sbjct: 190 GLGHYRSSPVPEHLTMFKKSQVQQISCGYDHNIAFVSEYA 229
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG L SR P V ++A+A GG + + E +Y G + GQ
Sbjct: 242 WGRGEEGQLGHDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQLYTWGCSREGQ 301
Query: 103 LGISENI 109
LG ++I
Sbjct: 302 LGHGDDI 308
>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
Length = 1050
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 159/342 (46%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AAG HS + +G V FG WG N G
Sbjct: 192 LAQVAAGGAHSFALSLSGAV--FG----------------------------WGMNNAGQ 221
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ SP V+ ++ V +SCG +HTA +++ G + T+G G
Sbjct: 222 LGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG----------- 269
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT A +
Sbjct: 270 -SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
Length = 975
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 159/342 (46%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG ++ +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG---HVREGNKPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AAG HS + +G V FG WG N G
Sbjct: 192 LAQVAAGGAHSFALSLSGAV--FG----------------------------WGMNNAGQ 221
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ SP V+ ++ V +SCG +HTA +++ G + T+G G
Sbjct: 222 LGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG----------- 269
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT A +
Sbjct: 270 -SYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G +GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Papio anubis]
Length = 1050
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 159/342 (46%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AAG HS + +G V FG WG N G
Sbjct: 192 LAQVAAGGAHSFALSLSGAV--FG----------------------------WGMNNAGQ 221
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ SP V+ ++ V +SCG +HTA +++ G + T+G G
Sbjct: 222 LGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG----------- 269
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT A +
Sbjct: 270 -SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Nomascus leucogenys]
Length = 1050
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 159/342 (46%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AAG HS + +G V FG WG N G
Sbjct: 192 LAQVAAGGAHSFALSLSGAV--FG----------------------------WGMNNAGQ 221
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ SP V+ ++ V +SCG +HTA +++ G + T+G G
Sbjct: 222 LGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG----------- 269
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT A +
Sbjct: 270 -SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
Length = 1054
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 159/342 (46%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 28 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 84
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 85 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 143
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 144 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 195
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AAG HS + +G V FG WG N G
Sbjct: 196 LAQVAAGGAHSFALSLSGAV--FG----------------------------WGMNNAGQ 225
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ SP V+ ++ V +SCG +HTA +++ G + T+G G
Sbjct: 226 LGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG----------- 273
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT A +
Sbjct: 274 -SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 314
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 218 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 277
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 278 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 336
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 337 CNVKCPSPVK 346
>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Pan paniscus]
gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Gorilla gorilla gorilla]
gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
Full=HECT domain and RCC1-like domain-containing protein
3
gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
Length = 1050
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 159/342 (46%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AAG HS + +G V FG WG N G
Sbjct: 192 LAQVAAGGAHSFALSLSGAV--FG----------------------------WGMNNAGQ 221
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ SP V+ ++ V +SCG +HTA +++ G + T+G G
Sbjct: 222 LGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG----------- 269
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT A +
Sbjct: 270 -SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 [Nomascus leucogenys]
Length = 4855
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 156/318 (49%), Gaps = 43/318 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + + R +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4111 GKLGHGNS-----DRQRRPXQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNT 4165
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSILG 219
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4166 SNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN------ 4217
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNHA 278
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4218 ---STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHN 4274
Query: 279 RRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
R +L S G++Y WGSN G LG+G + + P V G
Sbjct: 4275 RPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG- 4333
Query: 318 FSESPVDQVSCGWKHTAA 335
V Q+S G H+AA
Sbjct: 4334 LQGKNVRQISAGRCHSAA 4351
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 128/246 (52%), Gaps = 19/246 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP + + ++CG H+ +T G ++ G D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPX-----QGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4159
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4160 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4218
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4219 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4268
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4269 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4327
Query: 281 PSLISG 286
P+L++G
Sbjct: 4328 PTLVTG 4333
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 115/215 (53%), Gaps = 22/215 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
+GNGDYGRLGLG+ ++ P +A E + + +ACG HTL ++ G V+A G D+G
Sbjct: 4152 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4211
Query: 102 QLGISENIGYSLEPLRIS-----GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+LG+ + S P +I G+KK ++ G S A+T DG +Y +G++ +G
Sbjct: 4212 KLGLGNSTAKS-SPQKIDVLCGIGIKK----VACGTQFSVALTKDGHVYTFGQDR--LIG 4264
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
L + A+ P ++ L+G+ + A+G E ++A+ G V +WG+ G+LG G +
Sbjct: 4265 LPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNH 4324
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+ P L+ L+G V+ +AG HSA
Sbjct: 4325 V---------REPTLVTGLQGKNVRQISAGRCHSA 4350
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 128/302 (42%), Gaps = 45/302 (14%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3972 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4027
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4028 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4077
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS------------ 282
V + + G HS + E+G V+ +GD K+ + RRP
Sbjct: 4078 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPXQGEEVVQMSCGF 4137
Query: 283 -----LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
+ S G+L+T+G+ + G LG+G+ PERV + QV+CG HT A+S
Sbjct: 4138 KHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVS 4196
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
+ W +G DG G+LG GN P ++ + +V+CG +
Sbjct: 4197 ADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSV 4246
Query: 398 AL 399
AL
Sbjct: 4247 AL 4248
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
Length = 663
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 160/331 (48%), Gaps = 64/331 (19%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGY 132
K++ACG HT +TE+G ++ G+ND+GQLGI E + S P + LK E V+ ++ G
Sbjct: 39 KSVACGDEHTALVTESGRLFTFGVNDWGQLGIDE-VKVSTRPCCVKKLKPEKVKVVACGR 97
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
H+ T G LY +G N +GQLG+ + P+ KVEC + K A G + SVA+
Sbjct: 98 IHTIVATESGCLYTFGANGDGQLGVEDIPSSNCPV--KVECEPRQY-KALAAGADHSVAL 154
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G++ WG G G+LG LG + S TP L+ KV A G+ H+A
Sbjct: 155 TDDGELYVWGGGSEGQLG-------LGDIDDKS--TPTLLS--TDNKVISVACGYYHTAF 203
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + G V+ FG EG+ GG+L G++ + +++ PE
Sbjct: 204 VTDVGEVFTFG----------EGD---------GGKL-GQGTDYGKAVAPKKVNI---PE 240
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+ + V+CG HT ++E GK+ T+G GG+ GQLGH N
Sbjct: 241 KAKS---------VACGGSHTVVLTECGKVYTFGEGGN------------GQLGHKNKYF 279
Query: 372 YIH-PTIVNFGENVKALQVSCGFNHTGALLE 401
Y P +NF V Q++ G NHT + E
Sbjct: 280 YCETPVWLNFKHKV--TQIAAGENHTALVTE 308
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 152/320 (47%), Gaps = 43/320 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G D+G+LG+ ++ RP + +K +ACG HT+ TE+GC+Y G N GQ
Sbjct: 60 FGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVVACGRIHTIVATESGCLYTFGANGDGQ 119
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ E+I S P+++ ++ ++ G HS A+T DGELY+WG S GQLGLG
Sbjct: 120 LGV-EDIPSSNCPVKVECEPRQYKALAAGADHSVALTDDGELYVWGGGSEGQLGLGDIDD 178
Query: 163 KVIP--IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
K P + T + +S A G+ + VT G+V ++G G G+LG G +
Sbjct: 179 KSTPTLLSTDNKVIS------VACGYYHTAFVTDVGEVFTFGEGDGGKLGQGTDYG---- 228
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA------VDKMLFQE 274
P+ + E K K A G H+ + E G+VY FG+ +K + E
Sbjct: 229 ----KAVAPKKVNIPE--KAKSVACGGSHTVVLTECGKVYTFGEGGNGQLGHKNKYFYCE 282
Query: 275 G----NHARRPSLISGGE-----------LYTWGSNENGCLGIG--SIDVLHSPERVQGP 317
N + + I+ GE LYT+G + LG+ + P+R +
Sbjct: 283 TPVWLNFKHKVTQIAAGENHTALVTEKGQLYTFGDGRHAKLGLDHECYSNQYFPQRSKR- 341
Query: 318 FSESPVDQVSCGWKHTAAIS 337
FS+ V QVSCG H ++
Sbjct: 342 FSKFIVTQVSCGGCHMIVLA 361
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 113/251 (45%), Gaps = 49/251 (19%)
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
+ G K A G E + VT G++ ++G G+LG I ST P +K
Sbjct: 33 VRGDKAKSVACGDEHTALVTESGRLFTFGVNDWGQLG------IDEVKVSTR---PCCVK 83
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP------------ 281
+L+ KVK+ A G +H+ E+G +Y FG ++ ++ + P
Sbjct: 84 KLKPEKVKVVACGRIHTIVATESGCLYTFGANGDGQLGVEDIPSSNCPVKVECEPRQYKA 143
Query: 282 ---------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 332
+L GELY WG G LG+G ID +P + +++ V V+CG+ H
Sbjct: 144 LAAGADHSVALTDDGELYVWGGGSEGQLGLGDIDDKSTPTLLS---TDNKVISVACGYYH 200
Query: 333 TAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVS 390
TA +++ G++ T+G G GG+LG G D + P VN E KA V+
Sbjct: 201 TAFVTDVGEVFTFGEG------------DGGKLGQGTDYGKAVAPKKVNIPE--KAKSVA 246
Query: 391 CGFNHTGALLE 401
CG +HT L E
Sbjct: 247 CGGSHTVVLTE 257
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 18/179 (10%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G G+LGLG ++ + P + S K + ++ACG HT F+T+ G V+ G D G
Sbjct: 162 VWGGGSEGQLGLGDIDDKSTPTLLSTDNK--VISVACGYYHTAFVTDVGEVFTFGEGDGG 219
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + G ++ P +++ + ++ ++ G H+ +T G++Y +G+ NGQLG K
Sbjct: 220 KLGQGTDYGKAVAPKKVN-IPEKAKSVACGGSHTVVLTECGKVYTFGEGGNGQLGHKNKY 278
Query: 162 AKVIPIPTKVECLSGIF------TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
C + ++ Q A G + VT G++ ++G G +LG E
Sbjct: 279 ---------FYCETPVWLNFKHKVTQIAAGENHTALVTEKGQLYTFGDGRHAKLGLDHE 328
>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Pongo abelii]
Length = 1050
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 159/342 (46%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AAG HS + +G V FG WG N G
Sbjct: 192 LAQVAAGGAHSFALSLSGAV--FG----------------------------WGMNNAGQ 221
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ SP V+ ++ V +SCG +HTA +++ G + T+G G
Sbjct: 222 LGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG----------- 269
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT A +
Sbjct: 270 -SYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G +GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
garnettii]
Length = 1050
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 159/342 (46%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AAG HS + +G V FG WG N G
Sbjct: 192 LAQVAAGGAHSFALSLSGAV--FG----------------------------WGMNNAGQ 221
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ SP V+ ++ V +SCG +HTA +++ G + T+G G
Sbjct: 222 LGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKNGGVFTFGAG----------- 269
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT A +
Sbjct: 270 -SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 122/280 (43%), Gaps = 34/280 (12%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG++ P I
Sbjct: 74 KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQK 133
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++Q+S G H A+ DG+ + WGKNS+GQLGLGK+ P +V L GI
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-PQRVRSLEGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V WG +G+LG E +P +K L K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD---------RESPCHVKLLRTQK 243
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI--------------- 284
V + G H+A + +NG V+ FG + ++ N P +
Sbjct: 244 VVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303
Query: 285 --------SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
S G +Y +G G LG G + P V+G
Sbjct: 304 QHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT+ G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
Length = 1031
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 158/342 (46%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHGREGN---KPEQIGA 80
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G++ S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKDFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AAG HS + +G V FG WG N G
Sbjct: 192 LAQVAAGGAHSFALSLSGAV--FG----------------------------WGMNNAGQ 221
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ + SP V+ ++ V +SCG +HTA +++ G + T+G G
Sbjct: 222 LGLSDEEDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG----------- 269
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT A +
Sbjct: 270 -SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL E R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|148672794|gb|EDL04741.1| mCG16651 [Mus musculus]
Length = 462
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 125/244 (51%), Gaps = 8/244 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ +G+LG +S RP A + ++CG H++ + G V+A G GQL
Sbjct: 47 GDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQL 106
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ DG ++ WG+NS GQLGLGK +
Sbjct: 107 GIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKN-S 165
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ IP KV+ L GI Q A G S A++ G WG+ SG+L ++ G
Sbjct: 166 RSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQL------ALSGNKV 219
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + E G+V+ FG + ++ + R P
Sbjct: 220 KEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQ 279
Query: 283 LISG 286
LI G
Sbjct: 280 LIEG 283
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 146/329 (44%), Gaps = 59/329 (17%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
A G H+L L VY+ G N +GQLG + + P I L V +S G HS
Sbjct: 28 ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQS-TERPEPIQALNDLHVDLVSCGKEHS 86
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ G+++ WG S GQLG+G + ++ +PTK++ L+GI Q + G S+A++
Sbjct: 87 VAVCHKGKVFAWGAGSEGQLGIG-EFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSED 145
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V SWG G+LG G+ S S+ P+ +K LEG+ + AAG HS +
Sbjct: 146 GHVFSWGRNSEGQLGLGKNSR--------SQAIPQKVKSLEGIPLAQVAAGGTHSFALSL 197
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDV---LHSPE 312
G + WGSN +G L + V ++ P
Sbjct: 198 TGTS------------------------------FGWGSNRSGQLALSGNKVKEQIYKPH 227
Query: 313 RVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+ G V +SCG++HTA ++ EG++ T+G G S G S GQ G
Sbjct: 228 SI-GALKNLSVIYISCGYEHTAVLTEEGQVFTFG-GNSSGQLQPSPRS--GQRG------ 277
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGALL 400
P ++ G + Q+ C HT A +
Sbjct: 278 ---PQLIE-GIGGRVSQIECASYHTIAYV 302
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 124/282 (43%), Gaps = 56/282 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HHS + + +Y G NS GQLG + + P P ++ L+ + +
Sbjct: 23 ELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEP--IQALNDLHVDLVS 80
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E SVAV GKV +WGAG G+LG G+ I + P IK L G+K+
Sbjct: 81 CGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEI--------SFMPTKIKALAGIKIIQV 132
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G HS + E+G V ++WG N G LG+G
Sbjct: 133 SCGHYHSLALSEDGHV------------------------------FSWGRNSEGQLGLG 162
Query: 304 SIDVLHS-PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
+ P++V+ P+ QV+ G H+ A+S ++GWG + G
Sbjct: 163 KNSRSQAIPQKVKS-LEGIPLAQVAAGGTHSFALSLTGT-SFGWGSNR----------SG 210
Query: 363 QLG-HGNDV--DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QL GN V P + +N+ + +SCG+ HT L E
Sbjct: 211 QLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTE 252
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G E + P A + ++CG H+L L+E G V++ G N G
Sbjct: 98 WGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEG 157
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ +N P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 158 QLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + I P + L + + G+E + +T G+V ++G SG+L S G
Sbjct: 218 KVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 277
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+LI+ + G +I A + A + G+V G
Sbjct: 278 ---------PQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 312
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 84/197 (42%), Gaps = 39/197 (19%)
Query: 229 PRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG- 286
PR +K G+++ AA+G HS + N RVY GD + ++ + RP I
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71
Query: 287 ---------------------GELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVD 324
G+++ WG+ G LGIG ++ P +++ + +
Sbjct: 72 NDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKA-LAGIKII 130
Query: 325 QVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG-NDVDYIHPTIVNFGE 382
QVSCG H+ A+SE G + +W G +S GQLG G N P V E
Sbjct: 131 QVSCGHYHSLALSEDGHVFSW------------GRNSEGQLGLGKNSRSQAIPQKVKSLE 178
Query: 383 NVKALQVSCGFNHTGAL 399
+ QV+ G H+ AL
Sbjct: 179 GIPLAQVAAGGTHSFAL 195
>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
boliviensis boliviensis]
Length = 1050
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 159/342 (46%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC ++K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AAG HS + +G V FG WG N G
Sbjct: 192 LAQVAAGGAHSFALSLSGAV--FG----------------------------WGMNNAGQ 221
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ SP V+ ++ V +SCG +HTA +++ G + T+G G
Sbjct: 222 LGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG----------- 269
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT A +
Sbjct: 270 -SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310
>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Megachile rotundata]
Length = 1135
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 165/374 (44%), Gaps = 52/374 (13%)
Query: 33 STLQRRFAALWGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
ST+ + WG+ +G LGLG +E P + ++ +ACG +T+ +T G
Sbjct: 71 STVTDKNMFCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQIACGENYTVLITRDG 130
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGK 149
VY+ G ND+GQLG E L+ I GL V +++ G HH+ A+ G+L+ WG
Sbjct: 131 QVYSCGNNDYGQLG-HEKGRKRLQ--LIPGLDAFVFKKVACGAHHTLAVNEWGQLFSWGS 187
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N+ GQLGL K + +P V L Q A G +A+T GK+ SWG+ G+L
Sbjct: 188 NAEGQLGLNSKNL-IECVPHMVRALGTSVVVQVACGINHVLALTNNGKLYSWGSNSDGQL 246
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
G G + +E P+LI L GV + G HS I ++G V+ +G +
Sbjct: 247 GLGTDVK--------NEIKPKLISSLAGVPIAFITCGGYHSMAISKSGAVFGWGKNTFGQ 298
Query: 270 MLFQEGNHARRPS----------------------LISGGELYTWGSNENGCLGIGSIDV 307
+ + + P L G ++T G+ G LG G+
Sbjct: 299 LGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGNTSN 358
Query: 308 LHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLG 365
P +V S V Q+SCG +HT + S G++ WG GG+ GQLG
Sbjct: 359 EILPRQVM-ELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGA------------GQLG 405
Query: 366 HGNDVDYIHPTIVN 379
+ P +V+
Sbjct: 406 NNITRSVATPQVVH 419
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 112/265 (42%), Gaps = 55/265 (20%)
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
+ D ++ WG +G+LGLG + I +P +++ +Q A G +V +T G
Sbjct: 71 STVTDKNMFCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQIACGENYTVLITRDG 130
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+V S G G+LGH + L +LI L+ K A G H+ ++E
Sbjct: 131 QVYSCGNNDYGQLGHEKGRKRL-----------QLIPGLDAFVFKKVACGAHHTLAVNE- 178
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
G+L++WGSN G LG+ S +++ +
Sbjct: 179 -----------------------------WGQLFSWGSNAEGQLGLNSKNLIECVPHMVR 209
Query: 317 PFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIH 374
S V QV+CG H A++ GK+ +W G +S GQLG G DV + I
Sbjct: 210 ALGTSVVVQVACGINHVLALTNNGKLYSW------------GSNSDGQLGLGTDVKNEIK 257
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +++ V ++CG H+ A+
Sbjct: 258 PKLISSLAGVPIAFITCGGYHSMAI 282
>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
Length = 1909
Score = 122 bits (307), Expect = 2e-25, Method: Composition-based stats.
Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 62/389 (15%)
Query: 43 WGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ +LG +S+ P F + +++ G ++ LTE G VY G
Sbjct: 603 WGSASNCKLGFKVASKEQSQPTPERLPNFNVSDICSISSGSYYSAALTENGDVYMWGRGS 662
Query: 100 FGQ-----LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
LGI + I L P+++ L ++V +S G++HS+A+ +GEL WG GQ
Sbjct: 663 VKNPPVPVLGIPQ-IEDQLLPIKLESLT-DIVVVSIGFYHSAAVRANGELLTWGVGEEGQ 720
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G +V P ++ L+ + Q G + ++ +T GKV +WG+ G+LG G
Sbjct: 721 LGHGDTQNQV--EPKVIQSLTSFWITQVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGD- 777
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA-------- 266
+T P + LE V A+G H A + + V +FG+ A
Sbjct: 778 --------TTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSKEVLVFGNGAAMGAASII 829
Query: 267 -------------VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+DK+ H ++ G++YTWG+ + LG G+ +P+
Sbjct: 830 SIPTLVPSLKYLHIDKLCC---GHYSTAAISECGDVYTWGTGQE--LGHGNNQTESTPKL 884
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V+ ++S + Q+SCG +HTA +++ G+I T G S GQLGH D
Sbjct: 885 VEALRNQS-IRQISCGGRHTAFLTDSGRIFT------------SGKDSFGQLGHQAG-DQ 930
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGALLE 401
P + + VSCG N+ AL +
Sbjct: 931 NKPKKIESLTKTTFISVSCGENYNIALFD 959
>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
[Rhipicephalus pulchellus]
Length = 1480
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 138/299 (46%), Gaps = 48/299 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ S RP V + + +ACGGAH+ +T +G +Y G +G+
Sbjct: 692 WGEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHSACITASGELYTWGKGRYGR 751
Query: 103 LGISENIGYSLEPLRI---SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P ++ SG + V +G + +T D ++ WG G+LG G
Sbjct: 752 LGHGDS-DDQLRPKKVEALSGWRVRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRGG 810
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+P+ +V+ L G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 811 SDGCKVPL--RVDLLQGMGVIRVECGSQFSVALTASGSVYTWGKGDYHRLGHGTDDHV-- 866
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P+ + L+G KV A G LH AC D
Sbjct: 867 -------RRPKRVAALQGKKVICIAVGSLHCVACTDT----------------------- 896
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
GE+YTWG N+ G LG G+++ +H P R+ +++VSCG HT A S
Sbjct: 897 --------GEVYTWGDNDEGQLGDGTVNAIHKP-RLVAALQGKKINRVSCGSAHTVAWS 946
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 176/388 (45%), Gaps = 61/388 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL-ACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P+ C A +L+ + GG TLF +T G VYATG
Sbjct: 586 WGHNHRGQLGGVEGAKVKLPMPCEALS--ALRPIQVVGGEQTLFAVTADGKVYATGYGAG 643
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE L+ +KK VV ++G H A++ +GE+Y WG+ +G+LG
Sbjct: 644 GRLGIGGTDSVSCPTLLESLQHVFIKKVVV--NSGGKHCLALSAEGEVYSWGEGDDGKLG 701
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G K++ P +E L G A G S +T G++ +WG G GRLGHG
Sbjct: 702 HGNKSS--CERPRVIESLRGKEVVDVACGGAHSACITASGELYTWGKGRYGRLGHGD--- 756
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKM---- 270
S + P+ ++ L G +V+ A +G + C+ ++ V+ +GD K+
Sbjct: 757 ------SDDQLRPKKVEALSGWRVRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRGG 810
Query: 271 -----------LFQ-------EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
L Q E +L + G +YTWG + LG G+ D + P+
Sbjct: 811 SDGCKVPLRVDLLQGMGVIRVECGSQFSVALTASGSVYTWGKGDYHRLGHGTDDHVRRPK 870
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
RV V ++ G H A ++ G++ TW G + GQLG G V+
Sbjct: 871 RVAA-LQGKKVICIAVGSLHCVACTDTGEVYTW------------GDNDEGQLGDGT-VN 916
Query: 372 YIH-PTIVNFGENVKALQVSCGFNHTGA 398
IH P +V + K +VSCG HT A
Sbjct: 917 AIHKPRLVAALQGKKINRVSCGSAHTVA 944
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 141/338 (41%), Gaps = 53/338 (15%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
+G + G N GQLG E L P+ L +Q+ G A+T DG++Y
Sbjct: 580 SGTILGWGHNHRGQLGGVEGAKVKL-PMPCEALSALRPIQVVGGEQTLFAVTADGKVYAT 638
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGG 205
G + G+ LG + PT +E L +F K+ + G + +A++ G+V SWG G
Sbjct: 639 GYGAGGR--LGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEGD 696
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LGHG +SS PR+I+ L G +V A G HSACI +G +Y +G
Sbjct: 697 DGKLGHGNKSSC---------ERPRVIESLRGKEVVDVACGGAHSACITASGELYTWGKG 747
Query: 266 AVDKMLFQEGNHARRPSLISGGE------------------------LYTWGSNENGCLG 301
++ + + RP + +++WG + G LG
Sbjct: 748 RYGRLGHGDSDDQLRPKKVEALSGWRVRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLG 807
Query: 302 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 360
G D P RV V +V CG + + A++ G + TWG G H
Sbjct: 808 RGGSDGCKVPLRVDL-LQGMGVIRVECGSQFSVALTASGSVYTWGKGDYH---------- 856
Query: 361 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+LGHG D P V + K + ++ G H A
Sbjct: 857 --RLGHGTDDHVRRPKRVAALQGKKVICIAVGSLHCVA 892
>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
sp. JC66]
Length = 851
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 184/380 (48%), Gaps = 63/380 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G G YG+LG G ++ P ++A+A G H+L LT++G VY+ G FG+
Sbjct: 52 FGMGMYGKLGHGDTANQLAPKKIEGLSD--IQAIAAGTNHSLALTKSGDVYSFGFGLFGR 109
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG N LEP +I GL ++ I+ G HS A+T G++Y +G NG GLG
Sbjct: 110 LG-HGNTDSQLEPKKIEGL-SDIQAIAAGDFHSLALTKSGDVYSFG---NGTSGLGHGNT 164
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P K+E LS + + A G S+A+T G V S+G G GRLGHG
Sbjct: 165 EDQSTPKKIESLSDV--QAIAAGGNHSLALTKSGDVYSFGFGLFGRLGHGD--------- 213
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------------------- 263
+ S+ P+ I++L ++ AAG HS + ++G VY FG
Sbjct: 214 TDSQLEPKKIEDLSDIQA--IAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLTPK 271
Query: 264 ---DRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
D + + + NH+ +L GE+Y++G G LG G D +P++++G
Sbjct: 272 KIEDLSDIQAVAAGANHSL--ALTKSGEVYSFGRGNTGQLGHGDTDDQLTPKKIEG---L 326
Query: 321 SPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
+ ++ G H+ A+++ G + ++G G +SG LGHG+ + + P +
Sbjct: 327 KDIQAIAAGDFHSLALTKSGDVYSFGNG-----------TSG--LGHGDTANQLEPKKIE 373
Query: 380 FGENVKALQVSCGFNHTGAL 399
+++A ++ G NH+ AL
Sbjct: 374 GLTDIQA--IAAGANHSLAL 391
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 118/234 (50%), Gaps = 22/234 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G G +GRLG G +S+ P ++A+A GG H+L LT++G VY+ G GQ
Sbjct: 201 FGFGLFGRLGHGDTDSQLEPKKIEDLSD--IQAIAAGGNHSLALTKSGDVYSFGWGLHGQ 258
Query: 103 LG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG +EN L P +I L ++ ++ G +HS A+T GE+Y +G+ + GQLG G
Sbjct: 259 LGHGDTEN---QLTPKKIEDLS-DIQAVAAGANHSLALTKSGEVYSFGRGNTGQLGHGDT 314
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ P K+E L I + A G S+A+T G V S+G G SG LGHG ++ L
Sbjct: 315 DDQL--TPKKIEGLKDI--QAIAAGDFHSLALTKSGDVYSFGNGTSG-LGHGDTANQL-- 367
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
P+ I+ L ++ A A + ++E + + DK + +
Sbjct: 368 -------EPKKIEGLTDIQAIAAGANHSLALAVEEQDSTIDPDEASFDKNILNQ 414
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 131/278 (47%), Gaps = 56/278 (20%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++ +G G+LG G A ++ P K+E LS I + A G S+A+T G V S+G
Sbjct: 49 VFSFGMGMYGKLGHGDTANQLAP--KKIEGLSDI--QAIAAGTNHSLALTKSGDVYSFGF 104
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G GRLGHG + S+ P+ I+ L ++ AAG HS + ++G VY FG
Sbjct: 105 GLFGRLGHG---------NTDSQLEPKKIEGLSDIQA--IAAGDFHSLALTKSGDVYSFG 153
Query: 264 ------------DRAVDK---------MLFQEGNHARRPSLISGGELYTWGSNENGCLGI 302
D++ K + GNH+ +L G++Y++G G LG
Sbjct: 154 NGTSGLGHGNTEDQSTPKKIESLSDVQAIAAGGNHSL--ALTKSGDVYSFGFGLFGRLGH 211
Query: 303 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 361
G D P++++ S + ++ G H+ A+++ G + ++GWG
Sbjct: 212 GDTDSQLEPKKIE---DLSDIQAIAAGGNHSLALTKSGDVYSFGWG------------LH 256
Query: 362 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
GQLGHG+ + + P + +++A V+ G NH+ AL
Sbjct: 257 GQLGHGDTENQLTPKKIEDLSDIQA--VAAGANHSLAL 292
>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
domestica]
Length = 1016
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 167/367 (45%), Gaps = 67/367 (18%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVC---SAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
WG+ G+LG+ ++ ++ R V C ++ +L ACG H+L L G V++ G N
Sbjct: 5 WGDNSSGQLGIPAVPRAKARAVRCRRGASLGNQTLLQAACGERHSLLLLSDGTVWSCGNN 64
Query: 99 DFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQLG + P +I L+ +++V +S G HS AI +G ++ WG S+GQLG+
Sbjct: 65 SCGQLGRKRCQKHG-RPAQIQALETQDIVSVSCGKEHSLAICKEGRVFSWGSGSDGQLGI 123
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ K+ IP K++ LS Q + G S+A+ G+V SWG G+LG G+
Sbjct: 124 -REFKKLSSIPKKIDELSSFKIIQVSCGHYHSIALAQDGRVFSWGKNNHGQLGLGENVP- 181
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S+ +P+ +K L+G+ + AAG HS
Sbjct: 182 -------SQASPQWVKSLDGIPLAQVAAGGAHSF-------------------------- 208
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS-----ESPVDQVSCGWKH 332
+L G Y WG N G L + S E++ PFS V +SCG +H
Sbjct: 209 ----ALSFSGTSYGWGRNNAGQLALSGKK--ESAEQISKPFSIGELKRLQVTYISCGDEH 262
Query: 333 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 391
TA ++ +GK+ T+G S D G QL G + + V+F Q++C
Sbjct: 263 TAVLTQDGKVFTFG--------SNDSGQLGRQLISGMKGPQVVDSAVSFS------QIAC 308
Query: 392 GFNHTGA 398
G HT A
Sbjct: 309 GSYHTLA 315
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 147/311 (47%), Gaps = 44/311 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN G+LG + RP A E + +++CG H+L + + G V++ G GQL
Sbjct: 62 GNNSCGQLGRKRCQKHGRPAQIQALETQDIVSVSCGKEHSLAICKEGRVFSWGSGSDGQL 121
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A+ DG ++ WGKN++GQLGLG+
Sbjct: 122 GIREFKKLSSIPKKIDELSSFKIIQVSCGHYHSIALAQDGRVFSWGKNNHGQLGLGENVP 181
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG-HGQESSILGFL 221
P V+ L GI Q A G S A++ G WG +G+L G++ S
Sbjct: 182 SQAS-PQWVKSLDGIPLAQVAAGGAHSFALSFSGTSYGWGRNNAGQLALSGKKES----- 235
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ P I EL+ ++V + G H+A + ++G+V
Sbjct: 236 -AEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKV---------------------- 272
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS--EG 339
+T+GSN++G LG I + P+ V S S Q++CG HT A S G
Sbjct: 273 --------FTFGSNDSGQLGRQLISGMKGPQVVDSAVSFS---QIACGSYHTLAYSCTTG 321
Query: 340 KILTWGWGGSH 350
+++++G G
Sbjct: 322 QVISFGCGSQR 332
>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
africana]
Length = 1050
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 158/342 (46%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AG HS + +G V FG WG N G
Sbjct: 192 LAQVTAGGAHSFALSLSGAV--FG----------------------------WGMNNAGQ 221
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ SP V+ ++ V +SCG +HTA +++ G + T+G G
Sbjct: 222 LGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKNGGVFTFGAG----------- 269
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT A +
Sbjct: 270 -SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT+ G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
Length = 1050
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 168/362 (46%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG +G+ G+GS P V ++K +ACGG H++FL E G VY GLN
Sbjct: 4 WGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + +P +I L + +V ++ G HS A++ G+L+ WG S+GQLGL
Sbjct: 64 GQLG---HDCEGSKPEQIGALAGQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGL-T 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECP--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S+ +P+ +K L+G+ + AAG HS + +G V FG
Sbjct: 177 -----SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAV--FG---------------- 213
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE- 338
WG N +G LG+ SP V+ S+ V +SCG +HTA +++
Sbjct: 214 ------------WGKNSSGQLGLSDERDRESPCHVKLLRSQKVV-YISCGEEHTAVLTKS 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G G S GQLGH + D ++P V + Q++CG +HT A
Sbjct: 261 GGVFTFGAG------------SCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
>gi|326670703|ref|XP_003199276.1| PREDICTED: hypothetical protein LOC571327 [Danio rerio]
Length = 1698
Score = 122 bits (306), Expect = 3e-25, Method: Composition-based stats.
Identities = 107/389 (27%), Positives = 169/389 (43%), Gaps = 60/389 (15%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
++ +LK DI + G + R F ++G+ + G+LGL +PV +
Sbjct: 27 SRLWLKSDIPVHISCGQSHSAFVTEQGRLF--VFGDNNRGQLGLQIKGPVTKPVCVKVLK 84
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQI 128
+++ACG HTL T G + A G N GQLG+ N S + LR + +
Sbjct: 85 GERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLL 144
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G H S+A+T DG L++WG NS GQLG G + ++P E G + G+
Sbjct: 145 SAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLP----KELNMGQSIHWVSCGYRH 200
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G V S+G GRLG L + + P+ ++ L V +++A G
Sbjct: 201 SALVTDSGDVYSFGESADGRLG-------LSAHQLANHSYPQRVESLHSV-LQVACGG-K 251
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVL 308
H+ + E+ ELY +G E G LG+G++ +
Sbjct: 252 HTLALTED-------------------------------ELYCFGGGEFGQLGLGTLVFV 280
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
G F + V V+CG +H+A I++ +L TF + H G+LGHG+
Sbjct: 281 ADSPVAVGHFRKGRVTHVTCGEQHSALITDSGLLY--------TFGDGRH---GKLGHGD 329
Query: 369 D--VDYIHPTIVNFGENVKALQVSCGFNH 395
+ + PT+ + V+CG +H
Sbjct: 330 ENFTNQFTPTVCQRFFEYSVMTVACGSSH 358
Score = 91.3 bits (225), Expect = 7e-16, Method: Composition-based stats.
Identities = 91/321 (28%), Positives = 141/321 (43%), Gaps = 74/321 (23%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGEL 144
+ +TG V+ FG+ I+ N+ P R+ LK ++ V IS G HS+ +T G L
Sbjct: 7 IPDTGAVFT-----FGKSKIANNV-----PSRL-WLKSDIPVHISCGQSHSAFVTEQGRL 55
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+++G N+ GQLGL K P+ KV L G + A G + ++ T G++L+ G
Sbjct: 56 FVFGDNNRGQLGLQIKGPVTKPVCVKV--LKGERAQSVACGTDHTLVSTSQGEILAAGGN 113
Query: 205 GSGRLGHGQESSILGF--LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G+LG G + + F LR +Y P +K+ +AG SA + E+GR
Sbjct: 114 SDGQLGLGHCNDSISFQRLRPFCDYAP----------IKLLSAGDHTSAALTEDGR---- 159
Query: 263 GDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
L+ WG N G LG G+ P+ + S
Sbjct: 160 --------------------------LFLWGDNSAGQLGFGNDSHALLPKELNMGQS--- 190
Query: 323 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND--VDYIHPTIVNF 380
+ VSCG++H+A +++ G G S+ G+LG ++ +P V
Sbjct: 191 IHWVSCGYRHSALVTDS-----------GDVYSFGESADGRLGLSAHQLANHSYPQRVES 239
Query: 381 GENVKALQVSCGFNHTGALLE 401
+V LQV+CG HT AL E
Sbjct: 240 LHSV--LQVACGGKHTLALTE 258
>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
Length = 1055
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 159/340 (46%), Gaps = 59/340 (17%)
Query: 44 GNGDYGRLG--LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
GN D+G+LG L +L ++ RP ++ E + + ++CG AH+L LT G V++ G N G
Sbjct: 61 GNNDHGQLGHDLDTLPNK-RPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVG 119
Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG G P I + K VVQI++G +H A+T +GELY WG NS GQLG+G
Sbjct: 120 QLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTT 179
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ KV P+PT ++ L+G+ A G S AV+ G + WG G+LG +
Sbjct: 180 SEKV-PMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLN----- 233
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S P ++ L + V+ + G ++ V+
Sbjct: 234 ----SRCYPTQLRTLRSLGVRYISCG--------DDFSVF-------------------- 261
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SE 338
L + G ++T G+ G LG GS P +V S + Q++CG +HT A S
Sbjct: 262 --LTNEGGVFTCGAGTFGQLGHGSCSNEIVPRKV-FELMGSKITQIACGRRHTLAFVPSR 318
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
GKI +G GG GQLG G ++ P IV
Sbjct: 319 GKIYGFGLGGV------------GQLGIGMVGNHSTPQIV 346
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 164/362 (45%), Gaps = 56/362 (15%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G LGLG +E P + + + CG +HTLFLT+ G +YA G ND
Sbjct: 6 WGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGNNDH 65
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + + P R++ L+ ++ IS G HS A+T G+++ WG N+ GQLG
Sbjct: 66 GQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDA 125
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + P P ++ + Q A G +A+T G++ +WG+ G+LG G S +
Sbjct: 126 ENGRQ-PTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVP 184
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P LI+ L GV + A G HS + ++G IFG
Sbjct: 185 M--------PTLIQSLAGVPIAFIACGGNHSFAVSKSGA--IFG---------------- 218
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
WG N G LG+ ++ P +++ S V +SCG + ++ E
Sbjct: 219 ------------WGKNTFGQLGLNDLNSRCYPTQLRTLRSLG-VRYISCGDDFSVFLTNE 265
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T G GTF GQLGHG+ + I P V K Q++CG HT A
Sbjct: 266 GGVFTCG----AGTF--------GQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLA 313
Query: 399 LL 400
+
Sbjct: 314 FV 315
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 119/275 (43%), Gaps = 48/275 (17%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG ++G+LGLG + + +P K++ + G ++ +T GK+ + G
Sbjct: 3 IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH L + P+ + LE + + G HS + G+V+ +G
Sbjct: 63 NDHGQLGHD--------LDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWG 114
Query: 264 DRAVDKMLFQEGNHARRPS------------------------LISGGELYTWGSNENGC 299
AV + L + + R+P+ L + GELY WGSN G
Sbjct: 115 SNAVGQ-LGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQ 173
Query: 300 LGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDG 357
LGIG+ + + P +Q + P+ ++CG H+ A+S+ G I WG TF
Sbjct: 174 LGIGTTSEKVPMPTLIQS-LAGVPIAFIACGGNHSFAVSKSGAIFGWG----KNTF---- 224
Query: 358 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
GQLG + +PT + ++ +SCG
Sbjct: 225 ----GQLGLNDLNSRCYPTQLRTLRSLGVRYISCG 255
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL L SR P ++ ++CG ++FLT G V+ G FGQ
Sbjct: 219 WGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQ 278
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLG 158
LG + + P ++ L ++ QI+ G H+ A + G++Y +G GQLG+G
Sbjct: 279 LG-HGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIG 335
>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
niloticus]
Length = 1004
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 162/361 (44%), Gaps = 58/361 (16%)
Query: 43 WGNGDYGRLGLGSLESR-WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN G+LG+G ++ + P C F LK + CGG H++FL G VY G N G
Sbjct: 4 WGNAKDGQLGIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSNSCG 63
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG + G S P + L +++ +S G HS A+ G+L+ WG GQLGLG
Sbjct: 64 QLG-HDKAGIS--PEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTT 120
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
V IP V+ L Q G + VA++ G++ +WG SG+LG G+
Sbjct: 121 ETTV-RIPRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGEP---- 175
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S+ P +K L G+ + AG G+H+
Sbjct: 176 ----SKLFPHPLKSLAGIPLAQITAG----------------------------GDHSFA 203
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EG 339
SL G ++ WG N G LG+ P ++ S+ V +SCG +HTAA++ +G
Sbjct: 204 LSL--SGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRSQKVV-YISCGDEHTAALTKDG 260
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ T+G G S GQLGHG+ + P V + Q++CG +HT A
Sbjct: 261 GLFTFGDG------------SWGQLGHGSTNSELLPRRVLELMGTEVSQIACGRHHTLAF 308
Query: 400 L 400
+
Sbjct: 309 V 309
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 64/138 (46%), Gaps = 3/138 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGL + R P + ++CG HT LT+ G ++ G +GQ
Sbjct: 213 WGKNRAGQLGLNDKQDRAVPCHIKFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQ 272
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + L P R+ L EV QI+ G HH+ A + G +Y +G NS+GQLG G
Sbjct: 273 LG-HGSTNSELLPRRVLELMGTEVSQIACGRHHTLAFVPSSGVVYAFGCNSHGQLGTGIL 331
Query: 161 AAKVIPIPTKVECLSGIF 178
P P K S F
Sbjct: 332 GDARSPFPVKTSVPSEDF 349
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 95/264 (35%), Gaps = 70/264 (26%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG G+LG G E + + + PR G +K G HS + +G
Sbjct: 1 MLCWGNAKDGQLGIGVEKNPV--------FEPRNCHVFSGRGLKEVGCGGQHSVFLMHDG 52
Query: 258 RVYIFG---------DRA-----------VDKMLFQEGNHARRPSLISGGELYTWGSNEN 297
VY G D+A K+ ++ G+L+ WG+ +
Sbjct: 53 SVYTCGSNSCGQLGHDKAGISPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDG 112
Query: 298 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGW---------- 346
G LG+G+ + R+ + + QV CG +H A+S +G++ TWG
Sbjct: 113 GQLGLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGK 172
Query: 347 ------------------------GGSH-------GTFSEDGHSSGGQLGHGNDVDYIHP 375
GG H G G + GQLG + D P
Sbjct: 173 GEPSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVP 232
Query: 376 TIVNFGENVKALQVSCGFNHTGAL 399
+ F + K + +SCG HT AL
Sbjct: 233 CHIKFLRSQKVVYISCGDEHTAAL 256
>gi|428170458|gb|EKX39383.1| hypothetical protein GUITHDRAFT_89130 [Guillardia theta CCMP2712]
Length = 396
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 123/397 (30%), Positives = 177/397 (44%), Gaps = 65/397 (16%)
Query: 44 GNGDYGRLGLGSLESRWR---PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
G+G GRLGL +R P+ + +K+LACGG H L L+ G VY+ G ND
Sbjct: 10 GHGAGGRLGLNDERARTAFTGPL--GTLQDVEVKSLACGGKHNLLLSRAGKVYSWGYNDS 67
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q G EP I L+ +VVQI+ G HS A+T E++ WG+ +GQLG G
Sbjct: 68 RQTGHGVEDLSDWEPRWIRALETVKVVQIAAGEDHSVALTDRSEVFTWGRGLHGQLGHGD 127
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + P V+ L G K G+E + A+TG GKVL +G+ SG+LG+G +G
Sbjct: 128 VSD--VWFPFLVKGLQGKGIKSIGCGYENTFAITGTGKVLGFGSAASGKLGNGDVDGGIG 185
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM--------- 270
+ Y P +K L + A G S + G++Y G A ++
Sbjct: 186 ----GNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLGIPFEEVES 241
Query: 271 -------LFQEGNH------------ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSP 311
QE +H + +L G +Y+WGS N LG G + +P
Sbjct: 242 LNLPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINWALGHGGTEDTFTP 301
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+ V P VS G H+AA+S G+I TW G + GQLG G ++
Sbjct: 302 KMV-AMLEADPCVSVSAGGYHSAAVSATGRIYTW------------GRNFVGQLGTGQNI 348
Query: 371 -----DYIH--PTIVNFGENVK----ALQVSCGFNHT 396
D++ PT V +V A++V CG HT
Sbjct: 349 DDHSADHVQRLPTRVILKGSVDSSEMAMRVGCGQCHT 385
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 119/237 (50%), Gaps = 18/237 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG G + W P + + +K++ CG +T +T TG V G G+
Sbjct: 115 WGRGLHGQLGHGDVSDVWFPFLVKGLQGKGIKSIGCGYENTFAITGTGKVLGFGSAASGK 174
Query: 103 LG---ISENIGYSLE-PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
LG + IG ++ P+++ L K ++Q + G + S ++ G+LY G +NGQLG+
Sbjct: 175 LGNGDVDGGIGGNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLGI 234
Query: 158 GKKAAKVIPIP---TKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+ + + +P T E G+F K + G S+A++ G V SWG+G + LGHG
Sbjct: 235 PFEEVESLNLPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINWALGHGG 294
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
+ +TP+++ LE +AG HSA + GR+Y +G V ++
Sbjct: 295 ---------TEDTFTPKMVAMLEADPCVSVSAGGYHSAAVSATGRIYTWGRNFVGQL 342
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 139/342 (40%), Gaps = 56/342 (16%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKN 150
VY+ G G+LG+++ + + L+ EV ++ G H+ ++ G++Y WG N
Sbjct: 6 VYSCGHGAGGRLGLNDERARTAFTGPLGTLQDVEVKSLACGGKHNLLLSRAGKVYSWGYN 65
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+ Q G G + P + L + Q A G + SVA+T +V +WG G G+LG
Sbjct: 66 DSRQTGHGVEDLSDWE-PRWIRALETVKVVQIAAGEDHSVALTDRSEVFTWGRGLHGQLG 124
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
HG S + + P L+K L+G +K G+ ++ I G+V FG A K+
Sbjct: 125 HGDVSDV---------WFPFLVKGLQGKGIKSIGCGYENTFAITGTGKVLGFGSAASGKL 175
Query: 271 ---------------------------LFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G L G+LY+ G NG LGI
Sbjct: 176 GNGDVDGGIGGNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLGIP 235
Query: 304 SIDVLHSPERVQGPFSESP-----VDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDG 357
+V G E V VSCG H+ A+SE G + +WG G +
Sbjct: 236 FEEVESLNLPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINWA------ 289
Query: 358 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LGHG D P +V E + VS G H+ A+
Sbjct: 290 ------LGHGGTEDTFTPKMVAMLEADPCVSVSAGGYHSAAV 325
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G LG G E + P + + E +++ GG H+ ++ TG +Y G N GQ
Sbjct: 282 WGSGINWALGHGGTEDTFTPKMVAMLEADPCVSVSAGGYHSAAVSATGRIYTWGRNFVGQ 341
Query: 103 LGISENI 109
LG +NI
Sbjct: 342 LGTGQNI 348
>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
mutus]
Length = 4874
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/332 (32%), Positives = 162/332 (48%), Gaps = 56/332 (16%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4054 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4113
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4114 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4172
Query: 160 KAAKVIPIPTKVECLSG----------IFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGR 208
+ K +P +V L G +F Q A G ++AV+ G ++ ++G G G+
Sbjct: 4173 TSNK--KLPERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSADGSMVWAFGDGDYGK 4230
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAV 267
LG G ST++ +P+ + L G+ +K A G S + ++G VY FG DR +
Sbjct: 4231 LGLGN---------STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLI 4281
Query: 268 DKMLFQEGNHARRP---------------------SLISGGELYTWGSNENGCLGIGSID 306
+ NH R +L S G++Y WGSN G LG+G +
Sbjct: 4282 GLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTN 4341
Query: 307 VLHSPERV---QGPFSESPVDQVSCGWKHTAA 335
+ P V QG V Q+S G H+AA
Sbjct: 4342 HVREPTLVTVLQG----KNVRQISAGRCHSAA 4369
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 126/255 (49%), Gaps = 24/255 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4108 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4167
Query: 103 LGISENIGYSLEPLRISGLKKEVV-----------QISTGYHHSSAITVDGEL-YMWGKN 150
LG+ L P R++ L+ + Q++ G +H+ A++ DG + + +G
Sbjct: 4168 LGLGNTSNKKL-PERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSADGSMVWAFGDG 4226
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
G+LGLG AK P KV+ L GI K+ A G + SVA+T G V ++G L
Sbjct: 4227 DYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLP 4284
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G R+ + P+ I L GV ++ A G H+ + G VY +G + ++
Sbjct: 4285 EG---------RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4335
Query: 271 LFQEGNHARRPSLIS 285
NH R P+L++
Sbjct: 4336 GLGHTNHVREPTLVT 4350
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 426 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 484
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 485 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 544
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 545 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 600
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 601 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 650
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 651 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 710
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 711 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 743
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 138/321 (42%), Gaps = 60/321 (18%)
Query: 83 TLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
T ++ET VY G N QL G E I L+P +++ + I G + + I+
Sbjct: 363 TPIVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVIST 418
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVL 199
DG + GK S G+LGLG + E I ++ G + ++A T G+V
Sbjct: 419 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 478
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 479 SWGDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG- 528
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
ELYTWG + G LG G + + P V+
Sbjct: 529 -----------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK--- 556
Query: 319 SESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 557 DISNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVI 606
Query: 379 NFGENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 607 EALQGMFIRKVCAGSQSSLAL 627
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 480 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 539
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 540 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 596
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 597 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 651
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 652 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 692
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 119/276 (43%), Gaps = 45/276 (16%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4033 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4090
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4091 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4141
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ ++ ++ + P ++ E Y G N L
Sbjct: 4142 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFL 4201
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
QV+CG HT A+S + W +G DG G+
Sbjct: 4202 ---------------------QVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4230
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4231 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4266
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 584 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 641
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 642 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 701
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 702 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 743
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 533 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 590
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 591 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 647
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 648 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 699
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 700 --STGPITKPKKVSGLDGIAIQQISAGTSHS 728
>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 1800
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 144/307 (46%), Gaps = 51/307 (16%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+K+ V ++ G+ H + I+ DGEL+ WG NS GQLG G K P +VE
Sbjct: 1031 EKKAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIM 1090
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE-GVKV 240
+ G E SVAV ++ SWG+ G+LGHG +L T + P+ I++ G KV
Sbjct: 1091 ISCGGEHSVAVDQSFQIYSWGSSRYGQLGHG----VL-----TPQNLPKKIEDFTGGQKV 1141
Query: 241 KIAAAGFLHSACIDENGRVYIFG-------------DRAV--------------DKMLFQ 273
A G+ H+ + ++G ++ FG +RAV +++
Sbjct: 1142 LAIATGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAI 1201
Query: 274 EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 333
H+ + G++Y+WG+N G LG G+I+ P+++ P+ ++SCG HT
Sbjct: 1202 AAGHSHSIMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDE-LKGKPIIKISCGHFHT 1260
Query: 334 AAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
AISE + WG G H LG+G++ + + P ++ F N K +V CG
Sbjct: 1261 VAISELNSVYCWG-QGEHMC-----------LGNGSNKNELSPKMIEFFINKKIEKVVCG 1308
Query: 393 FNHTGAL 399
HT +
Sbjct: 1309 LYHTATV 1315
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 156/352 (44%), Gaps = 66/352 (18%)
Query: 43 WGNGDYGRLGLGSLESRWR--PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN G+LG G +++ P F+ + ++CGG H++ + ++ +Y+ G + +
Sbjct: 1056 WGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCGGEHSVAVDQSFQIYSWGSSRY 1115
Query: 101 GQLG----ISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
GQLG +N+ P +I ++V+ I+TGY H+ + G+L+ +G N +GQ
Sbjct: 1116 GQLGHGVLTPQNL-----PKKIEDFTGGQKVLAIATGYAHTMVLKKSGDLFTFGWNDSGQ 1170
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
LGLG + +P+ + + GI ++ A G S+ G + SWGA G+LGH
Sbjct: 1171 LGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGH 1230
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G +I LR P+ I EL+G + + G H+ I E V
Sbjct: 1231 G---NIEKSLR------PKQIDELKGKPIIKISCGHFHTVAISELNSV------------ 1269
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 331
Y WG E+ CLG GS SP+ ++ F +++V CG
Sbjct: 1270 ------------------YCWGQGEHMCLGNGSNKNELSPKMIEF-FINKKIEKVVCGLY 1310
Query: 332 HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-----DYIHPTIV 378
HTA ++ + G G G G+LG G D+ D HP ++
Sbjct: 1311 HTATVTAAE-----NGSDRGNVYICGGGEHGKLGTGGDLKTPFFDKPHPAVI 1357
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 11/181 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G++E RP + + ++CG HT+ ++E VY G +
Sbjct: 1220 WGANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCGHFHTVAISELNSVYCWGQGEHMC 1279
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITV------DGELYMWGKNSNGQL 155
LG N L P I + K++ ++ G +H++ +T G +Y+ G +G+L
Sbjct: 1280 LGNGSNKN-ELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYICGGGEHGKL 1338
Query: 156 GLG---KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
G G K P P + L+ + + G E S +T G + +WG G G++G+G
Sbjct: 1339 GTGGDLKTPFFDKPHPAVIPSLNSMNIVGFSSGSEFSAIITNNGALYTWGYGNFGQIGNG 1398
Query: 213 Q 213
+
Sbjct: 1399 K 1399
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 11/158 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLT------ETGCVYATG 96
WG G++ LG GS ++ P + F ++ + CG HT +T + G VY G
Sbjct: 1272 WGQGEHMCLGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYICG 1331
Query: 97 LNDFGQLGISENIGYSL----EPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNS 151
+ G+LG ++ P I L +V S+G S+ IT +G LY WG +
Sbjct: 1332 GGEHGKLGTGGDLKTPFFDKPHPAVIPSLNSMNIVGFSSGSEFSAIITNNGALYTWGYGN 1391
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
GQ+G GK +P + + Q + GF ++
Sbjct: 1392 FGQIGNGKTEDMWLPTKISLNDQRFMLFNQNSKGFAKA 1429
>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
porcellus]
Length = 1050
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 165/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLES--RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG G+ G+G+ P C S+K +ACGG H +FL E G VY GLN
Sbjct: 4 WGYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLLEDGEVYTCGLNTK 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E G +P +I L + ++ ++ G HS A++ G+L+ WG S+GQLGL
Sbjct: 64 GQLG-HEREGN--QPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMT 120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
V +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 121 TEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFP--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S+ +P+ ++ LEG+ + AAG HS + +G V FG
Sbjct: 177 -----SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAV--FG---------------- 213
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE- 338
WG N G LG+ SP V+ ++ V +SCG +HTA +++
Sbjct: 214 ------------WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKS 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G G S GQLGH + D ++P V + Q++CG HT A
Sbjct: 261 GGVFTFGAG------------SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 139/321 (43%), Gaps = 56/321 (17%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG+ P I
Sbjct: 74 QPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++Q+S G H A+ DG+ + WGKNS+GQLGLGK+ P +V L GI
Sbjct: 134 LNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTS-PQRVRSLEGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V WG +G+LG E +P +K L K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
V + G H+A + ++G V +T+G+ G
Sbjct: 244 VVYISCGEEHTAVLTKSGGV------------------------------FTFGAGSCGQ 273
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDG 357
LG S++ +P RV S V Q++CG +HT A S G I +G G
Sbjct: 274 LGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR-------- 324
Query: 358 HSSGGQLGHGNDVDYIHPTIV 378
GQLG G+ + P+ V
Sbjct: 325 ----GQLGTGHTCNVKCPSPV 341
>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
africana]
Length = 1018
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 150/314 (47%), Gaps = 42/314 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + R RP + A E ++ L+CG H+L + G V+A G GQL
Sbjct: 46 GDNSCGQLGRRGVPHRKRPGLIQALETLNVDLLSCGKEHSLAVCHKGRVFAWGAGSEGQL 105
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E + P+++ L +++Q+S G++HS A++ DG+++ WG NS+GQLGLGK+
Sbjct: 106 GIGEFKELNFTPMKVKALAGIKIIQVSCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFL 165
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V+ L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 166 SQ-ESPQRVKSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQL------ALSGNNV 218
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y PR I L+ + V + G H+A + ++G+V+ FGD
Sbjct: 219 PVQSYKPRSIGALKELGVVYISCGSEHTAVLTQDGKVFTFGD------------------ 260
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA--AISEGK 340
N +G LG G P+ V+G + V Q+ CG HT + +
Sbjct: 261 ------------NSSGQLGHGPTAEKRGPQLVEG--IDGLVSQIDCGSYHTLVYVYTTRQ 306
Query: 341 ILTWGWGGSHGTFS 354
++++G G S T S
Sbjct: 307 VISFGRGPSDTTSS 320
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 105/330 (31%), Positives = 151/330 (45%), Gaps = 61/330 (18%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
L+ A G H+L L G V+A G N GQLG + + P I L+ V +S G
Sbjct: 23 LRQAASGERHSLLLLSDGTVHACGDNSCGQLG-RRGVPHRKRPGLIQALETLNVDLLSCG 81
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+ G ++ WG S GQLG+G + ++ P KV+ L+GI Q + G S+A
Sbjct: 82 KEHSLAVCHKGRVFAWGAGSEGQLGIG-EFKELNFTPMKVKALAGIKIIQVSCGHYHSLA 140
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ G+V SWG G+LG G+E FL S+ +P+ +K LEG+ + AAG HS
Sbjct: 141 LSQDGQVFSWGNNSHGQLGLGKE-----FL---SQESPQRVKSLEGIPLAQVAAGGAHSF 192
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGI--GSIDVLH 309
+L G + WGSN G L + ++ V
Sbjct: 193 ------------------------------ALSLSGTSFGWGSNNAGQLALSGNNVPVQS 222
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
R G E V +SCG +HTA ++ +GK+ T+ G +S GQLGHG
Sbjct: 223 YKPRSIGALKELGVVYISCGSEHTAVLTQDGKVFTF------------GDNSSGQLGHGP 270
Query: 369 DVDYIHPTIVNFGENVKAL--QVSCGFNHT 396
+ P +V E + L Q+ CG HT
Sbjct: 271 TAEKRGPQLV---EGIDGLVSQIDCGSYHT 297
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 114/237 (48%), Gaps = 28/237 (11%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P+ A + ++CG H+L L++ G V++
Sbjct: 93 RVFA--WGAGSEGQLGIGEFKELNFTPMKVKALAGIKIIQVSCGHYHSLALSQDGQVFSW 150
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG N+ GQ
Sbjct: 151 GNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQ 210
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + +P+ P + L + + G E + +T GKV ++G SG+LG
Sbjct: 211 LAL---SGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQDGKVFTFGDNSSGQLG 267
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
HG + G P+L++ ++G+ +I + + VY++ R V
Sbjct: 268 HGPTAEKRG---------PQLVEGIDGLVSQIDCGSY--------HTLVYVYTTRQV 307
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 90/168 (53%), Gaps = 6/168 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN +G+LGLG S+ P + E L +A GGAH+ L+ +G + G N+ G
Sbjct: 150 WGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAG 209
Query: 102 QLGISEN--IGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N S +P I LK+ VV IS G H++ +T DG+++ +G NS+GQLG G
Sbjct: 210 QLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQDGKVFTFGDNSSGQLGHG 269
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
A K P VE + G+ ++ + V V +V+S+G G S
Sbjct: 270 PTAEKR--GPQLVEGIDGLVSQIDCGSYHTLVYVYTTRQVISFGRGPS 315
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 38/188 (20%)
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG---------- 286
G +++ AA+G HS + +G V+ GD + ++ + H +RP LI
Sbjct: 20 GAELRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETLNVDLLS 79
Query: 287 ------------GELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHT 333
G ++ WG+ G LGIG L+ +P +V+ + + QVSCG H+
Sbjct: 80 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKELNFTPMKVKA-LAGIKIIQVSCGHYHS 138
Query: 334 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGND-VDYIHPTIVNFGENVKALQVSC 391
A+S +G++ +W G++S GQLG G + + P V E + QV+
Sbjct: 139 LALSQDGQVFSW------------GNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAA 186
Query: 392 GFNHTGAL 399
G H+ AL
Sbjct: 187 GGAHSFAL 194
>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Meleagris gallopavo]
Length = 1050
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 169/362 (46%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG +G+ G+GS P V ++K +ACGG H++FL E G VY GLN
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E+ G +P I L + +V ++ G HS A++ G+++ WG S+GQLGL
Sbjct: 64 GQLG-HESEGS--KPELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGL-T 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECP--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S+ +P+ +K L+G+ + AAG HS + +G V FG
Sbjct: 177 -----SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAV--FG---------------- 213
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE- 338
WG N +G LG+ SP V+ S+ V +SCG +HTA +++
Sbjct: 214 ------------WGKNSSGQLGLSDERDRESPCHVKLLRSQKVV-YISCGEEHTAVLTKS 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G G S GQLGH + D ++P V + Q++CG +HT A
Sbjct: 261 GGVFTFGAG------------SCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 141/321 (43%), Gaps = 56/321 (17%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P + A + +ACG +H++ L++ G V++ G GQLG++ P I
Sbjct: 74 KPELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKK 133
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++QIS G H A+ DG+ + WG+NS GQLGLGK+ P +V+ L GI
Sbjct: 134 LNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS-PQRVKSLDGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V WG SG+LG E +P +K L K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDER---------DRESPCHVKLLRSQK 243
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
V + G H+A + ++G V +T+G+ G
Sbjct: 244 VVYISCGEEHTAVLTKSGGV------------------------------FTFGAGSCGQ 273
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDG 357
LG S++ +P RV S V Q++CG HT A S G I +G G
Sbjct: 274 LGHDSMNDEVNPRRVLE-LMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG---------- 322
Query: 358 HSSGGQLGHGNDVDYIHPTIV 378
+ GQLG G+ + P+ V
Sbjct: 323 --TRGQLGTGHTCNVKCPSPV 341
>gi|301122653|ref|XP_002909053.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
infestans T30-4]
gi|262099815|gb|EEY57867.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
infestans T30-4]
Length = 611
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 110/212 (51%), Gaps = 16/212 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G DYG+LG+G P F +H + A+ACG +T+ G V A G ND GQL
Sbjct: 197 GCNDYGQLGMGDHSGHLVPRPVDYFFRHPVLAVACGQHYTVASLRDGGVVAFGKNDHGQL 256
Query: 104 GISENIGYSLEPLRISG-LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G+ L P R++ L + VV Q+S GYHH++ +T DG +Y +G+N GQLGLG K
Sbjct: 257 GLDRVSEPVLLPTRLAPPLDRAVVPQLSCGYHHTAIVTEDGAVYTFGRNDYGQLGLGHKL 316
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P P VE LS + Q A G ++A++ GKV + GR HGQ LG
Sbjct: 317 HMARPTP--VESLSRMRITQVACGCYHTLALSDDGKVFPF-----GRNNHGQ----LGLE 365
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
S +P+LI L K AAGF HS C+
Sbjct: 366 TSMDCLSPQLISTLRN---KPVAAGFYHSVCL 394
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 151/368 (41%), Gaps = 68/368 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACGGAHTLFLTETGCVYATGLND 99
+G YG L LG R P + K +ACG T L E G V+ G ND
Sbjct: 35 FGQNTYGELALGDTNDRSTPTRVDLGRINDTKHVVDVACGNEQTTILFENGDVFTCGYND 94
Query: 100 FGQ--LGISENIGYSLEPLRIS-GLKK-EVVQISTGY--HHSSAITVDGELYMWGKNSNG 153
GQ +G +E + LR S GL V++ +G H +A+ +G LY G N G
Sbjct: 95 SGQCAIGTTERV----PSLRFSPGLSSHHTVRLFSGNGSEHLAALCANGFLYTVGFNMRG 150
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLGLG A + T VE L+G A + + V G + + G G+LG G
Sbjct: 151 QLGLG--TATTVTEATLVEELAGKRVVDVACSYFHTAIVMDNGDLHACGCNDYGQLGMGD 208
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
S L PR + V L AC
Sbjct: 209 HSGHL---------VPRPVDYFFRHPV-------LAVAC--------------------- 231
Query: 274 EGNHARRPSLISGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKH 332
G H SL GG + +G N++G LG+ + + + P R+ P + V Q+SCG+ H
Sbjct: 232 -GQHYTVASLRDGG-VVAFGKNDHGQLGLDRVSEPVLLPTRLAPPLDRAVVPQLSCGYHH 289
Query: 333 TAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 391
TA ++E G + T+ G + GQLG G+ + PT V ++ QV+C
Sbjct: 290 TAIVTEDGAVYTF------------GRNDYGQLGLGHKLHMARPTPVESLSRMRITQVAC 337
Query: 392 GFNHTGAL 399
G HT AL
Sbjct: 338 GCYHTLAL 345
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 155/363 (42%), Gaps = 64/363 (17%)
Query: 44 GNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGA-HTLFLTETGCVYATGLN 98
G D G+ +G+ E R+ P + S H+++ + G+ H L G +Y G N
Sbjct: 91 GYNDSGQCAIGTTERVPSLRFSPGLSS---HHTVRLFSGNGSEHLAALCANGFLYTVGFN 147
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLG+ + L K VV ++ Y H++ + +G+L+ G N GQLG+G
Sbjct: 148 MRGQLGLGTATTVTEATLVEELAGKRVVDVACSYFHTAIVMDNGDLHACGCNDYGQLGMG 207
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ ++P P + A G +VA G V+++G G+LG + S +
Sbjct: 208 DHSGHLVPRPVDYFFRHPVLA--VACGQHYTVASLRDGGVVAFGKNDHGQLGLDRVSEPV 265
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
L T RL L+ V + G+ H+A + E+G V
Sbjct: 266 --LLPT-----RLAPPLDRAVVPQLSCGYHHTAIVTEDGAV------------------- 299
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS- 337
YT+G N+ G LG+G + P V+ S + QV+CG HT A+S
Sbjct: 300 -----------YTFGRNDYGQLGLGHKLHMARPTPVES-LSRMRITQVACGCYHTLALSD 347
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
+GK+ + G ++ GQLG +D + P +++ ++ V+ GF H+
Sbjct: 348 DGKVFPF------------GRNNHGQLGLETSMDCLSPQLIS---TLRNKPVAAGFYHSV 392
Query: 398 ALL 400
L+
Sbjct: 393 CLV 395
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G DYG+LGLG RP + + + +ACG HTL L++ G V+ G N+ GQ
Sbjct: 302 FGRNDYGQLGLGHKLHMARPTPVESLSRMRITQVACGCYHTLALSDDGKVFPFGRNNHGQ 361
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
LG+ ++ L P IS L+ + ++ G++HS +
Sbjct: 362 LGLETSMD-CLSPQLISTLRNK--PVAAGFYHSVCL 394
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 133/320 (41%), Gaps = 66/320 (20%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRIS----GLKKEVVQISTGYHHSSAITVDGELYMW 147
+++ G N +G+L + + S P R+ K VV ++ G ++ + +G+++
Sbjct: 32 LFSFGQNTYGELALGDTNDRS-TPTRVDLGRINDTKHVVDVACGNEQTTILFENGDVFTC 90
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AALGFEQSVAVTGGGKVLSWGAGG 205
G N +GQ +G + +P LS T + + G E A+ G + + G
Sbjct: 91 GYNDSGQCAIG--TTERVPSLRFSPGLSSHHTVRLFSGNGSEHLAALCANGFLYTVGFNM 148
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LG G +++ +E T L++EL G +V A + H+A + +NG
Sbjct: 149 RGQLGLGTATTV-------TEAT--LVEELAGKRVVDVACSYFHTAIVMDNG-------- 191
Query: 266 AVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP---FSESP 322
+L+ G N+ G LG+G HS V P F P
Sbjct: 192 ----------------------DLHACGCNDYGQLGMGD----HSGHLVPRPVDYFFRHP 225
Query: 323 VDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
V V+CG +T A++ +G ++ +G HG D S L + P +
Sbjct: 226 VLAVACGQHYTVASLRDGGVVAFGKN-DHGQLGLDRVSEPVLLP-----TRLAPPL---- 275
Query: 382 ENVKALQVSCGFNHTGALLE 401
+ Q+SCG++HT + E
Sbjct: 276 DRAVVPQLSCGYHHTAIVTE 295
>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
HERC2-like [Bombus terrestris]
Length = 5151
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 149/319 (46%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P + ++ +K +A GG H L LT+ G +++ G + G
Sbjct: 3317 GEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDG 3376
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG ++ +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3377 KLGHGNSVSLD-KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDT 3435
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A ++ P V+ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3436 ATQM--KPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG----- 3488
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S YTP LI L G+ V G S + + G V+ +G ++ +H
Sbjct: 3489 ----SDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3544
Query: 279 RRPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R+P+L+ G G++Y WG N++G G GS V P V
Sbjct: 3545 RKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHE 3604
Query: 317 PFSESPVDQVSCGWKHTAA 335
++ V++VSCG H+ A
Sbjct: 3605 -LDDARVNRVSCGSSHSIA 3622
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 139/323 (43%), Gaps = 38/323 (11%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G +S P + + + +K +A GG H L L+ G VY+ G D G
Sbjct: 4350 GYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4409
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + Y L L E+V I+ G HHS+AIT G LY WGK G+LG G
Sbjct: 4410 KLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSE 4469
Query: 162 AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P VE L A G Q++ VT V SWG G G+LG G
Sbjct: 4470 DQL--TPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4521
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P I+ L G+ V G S + +G +Y +G ++ +H R
Sbjct: 4522 ---SDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVR 4578
Query: 280 RPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
RP ++ GE++TWG N+ G LG G+ L P V
Sbjct: 4579 RPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHA- 4637
Query: 318 FSESPVDQVSCGWKHTAAISEGK 340
+ +V+CG HT A S K
Sbjct: 4638 LQGKKITRVACGSAHTLAWSTMK 4660
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 166/385 (43%), Gaps = 55/385 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG PV+C + L G L +T G VYATG G+
Sbjct: 4297 WGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGAAGR 4356
Query: 103 LGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
LGI S + LE ++ +KK V +++G H A++ +G +Y WG+ +G+LG G
Sbjct: 4357 LGIGGTDSVMVPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHG 4414
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ + P +E L G A G S A+T G + +WG G GRLGHG
Sbjct: 4415 NRL--MYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD----- 4467
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S + TP+L++ L+ KV A +G + C+ ++ V+ +GD K+ +
Sbjct: 4468 ----SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSD 4523
Query: 277 HARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
+ P +L G +YTWG + LG G+ D + P +V
Sbjct: 4524 GCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKV 4583
Query: 315 QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
+ ++ G H A ++ G++ TW G + GQLG G
Sbjct: 4584 AA-LQGKKIISIATGSLHCVACTDKGEVFTW------------GDNDEGQLGDGTTSALQ 4630
Query: 374 HPTIVNFGENVKALQVSCGFNHTGA 398
P +V+ + K +V+CG HT A
Sbjct: 4631 RPRLVHALQGKKITRVACGSAHTLA 4655
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 158/350 (45%), Gaps = 77/350 (22%)
Query: 92 VYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
VY GLND QLG + + L+P+ I+G K + +S +
Sbjct: 3261 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQ----------E 3310
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G+ +NG+LGLG + + P + LS K+ A+ G + ++A+T GK+
Sbjct: 3311 GKLYACGEGTNGRLGLGDDSN--VCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIF 3368
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G G+LGHG S S PRLI+ L+ +++ A G HSA I +G +
Sbjct: 3369 SWGEGEDGKLGHGN---------SVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGEL 3419
Query: 260 YIFG-----------------DRAVDKMLFQE-------GNHARRPSLISGGELYTWGSN 295
Y +G + V ++ Q A+ +L + G +Y+WG
Sbjct: 3420 YTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDG 3479
Query: 296 ENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 351
+ G LG G D ++P +R+ G V Q+ CG + + A+++ G++ TWG G
Sbjct: 3480 DFGKLGRGGSDGCYTPLLIDRLNG----LGVVQIECGAQFSLALTKYGEVWTWGKGDYF- 3534
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHGND PT+V K + V+ G H A+ +
Sbjct: 3535 -----------RLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTD 3573
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 149/337 (44%), Gaps = 51/337 (15%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
+G +Y G N GQLG E L L S VQ++ G A+T DG++Y G
Sbjct: 4291 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATG 4350
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGS 206
+ G+LG+G + +PT +E + +F K+ A+ G + +A++ G V SWG G
Sbjct: 4351 YGAAGRLGIG--GTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDD 4408
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--- 263
G+LGHG L + R P+LI+EL G ++ A G HSA I G +Y +G
Sbjct: 4409 GKLGHGNR---LMYDR------PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 4459
Query: 264 ----------DRAVDKMLFQEGNH-----------ARRPSLISGGELYTWGSNENGCLGI 302
D+ K++ ++ A+ + +++WG + G LG
Sbjct: 4460 YGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4519
Query: 303 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 361
G D P +++ + V +V CG + + A++ G I TWG G H
Sbjct: 4520 GGSDGCKIPMKIES-LAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYH----------- 4567
Query: 362 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+LGHG D P V + K + ++ G H A
Sbjct: 4568 -RLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA 4603
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 122/270 (45%), Gaps = 45/270 (16%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
G H L LT+ VY+ G D G+LG + + Y L + + K + I+ G +S+ ++
Sbjct: 514 GTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLS 573
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGK 197
+GELY WG+ + G+LG G + + IPT V L+G A G Q++ VT G
Sbjct: 574 SNGELYTWGRGNYGRLGHGN--SDNVLIPTLVTALNGHMVVHVACGSGDSQTLCVTASGI 631
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V SWG G G+LG G TP+++ +L + V
Sbjct: 632 VFSWGDGNYGKLGRGG---------CDGSKTPKIVDKLLDINV----------------A 666
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
+VY G + +L + GE+YTWG E LG G+ + + P+ ++
Sbjct: 667 KVYCGGQFSA--------------ALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEV- 711
Query: 318 FSESPVDQVSCGWKHTAAISEGKILTWGWG 347
V ++ G H A++E + L +GWG
Sbjct: 712 LXTKKVKELCVGNFHVLALTEDQ-LVYGWG 740
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 107/230 (46%), Gaps = 27/230 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNGD GRLG G P + A ++ +ACG ++ L+ G +Y G ++G+
Sbjct: 529 WGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGR 588
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA--ITVDGELYMWGKNSNGQLGL 157
L G S+N+ L P ++ L VV ++ G S +T G ++ WG + G+LG
Sbjct: 589 LGHGNSDNV---LIPTLVTALNGHMVVHVACGSGDSQTLCVTASGIVFSWGDGNYGKLGR 645
Query: 158 ----GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
G K K+ V+ L I + G + S A+T G+V +WG G RLGHG
Sbjct: 646 GGCDGSKTPKI------VDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGN 699
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
E I P++I+ L KVK G H + E+ VY +G
Sbjct: 700 EEHI---------RYPKVIEVLXTKKVKELCVGNFHVLALTEDQLVYGWG 740
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 47/237 (19%)
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A+T V SWG G GRLGHG P+L++ L + A G +
Sbjct: 518 LALTQDSSVYSWGNGDGGRLGHGDR---------VWYDEPKLVEALVDKNITFIACGSTY 568
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------- 286
SA + NG +Y +G ++ ++ P+L++
Sbjct: 569 SAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACGSGDSQTLCVTA 628
Query: 287 -GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 344
G +++WG G LG G D +P ++ + V +V CG + +AA++ G++ TW
Sbjct: 629 SGIVFSWGDGNYGKLGRGGCDGSKTP-KIVDKLLDINVAKVYCGGQFSAALTAYGEVYTW 687
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G G G +LGHGN+ +P ++ K ++ G H AL E
Sbjct: 688 GKG------------EGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLALTE 732
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 71/152 (46%), Gaps = 8/152 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+YG+LG G + P + ++ + CGG + LT G VY G + +
Sbjct: 635 WGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYR 694
Query: 103 LG--ISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG E+I Y P I L K+V ++ G H A+T D +Y WG+N GQ +
Sbjct: 695 LGHGNEEHIRY---PKVIEVLXTKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQ--IDP 749
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
V+P PT LSG A G QS A
Sbjct: 750 ALGTVVPEPTLCPTLSGKNIIGLACGLTQSFA 781
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 29/141 (20%)
Query: 274 EGNHARRPSLISGGE-----------LYTWGSNENGCLGIGSIDVLHSP---ERVQGPFS 319
E A RP ++GGE +Y G G LGIG D + P E +Q F
Sbjct: 4320 ESLSALRPVQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFV 4379
Query: 320 ESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
+ V+ G KH A+S EG + +WG G G+LGHGN + Y P ++
Sbjct: 4380 KKVA--VNSGGKHCLALSSEGHVYSWGEGDD------------GKLGHGNRLMYDRPKLI 4425
Query: 379 NFGENVKALQVSCGFNHTGAL 399
+ + ++CG +H+ A+
Sbjct: 4426 EELLGTEIVDIACGGHHSAAI 4446
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 16/92 (17%)
Query: 311 PERVQGPFSESPVDQV---SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
P+RV G FSE PV + S G + A + + +WG G GG+LGHG
Sbjct: 494 PQRVYG-FSEKPVTMIASHSDGTHYLALTQDSSVYSWGNG------------DGGRLGHG 540
Query: 368 NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ V Y P +V + ++CG ++ L
Sbjct: 541 DRVWYDEPKLVEALVDKNITFIACGSTYSAVL 572
>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
Length = 435
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 171/389 (43%), Gaps = 67/389 (17%)
Query: 19 KLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC 78
+LG+ C + S + +WG GD GRLG+ + ++++P V ++ ++ +
Sbjct: 85 RLGNVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKR--VQMASA 142
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
GG H + LTE G VY G FG LG L L K +V +S G HS+A+
Sbjct: 143 GGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHSAAV 202
Query: 139 TVDGELYMWGKNS-NGQLGLGKKAAK---VIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
T GELY WG++ G+LG G + PTKV+ L GF ++A+T
Sbjct: 203 TESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIASVYCGGF-FTMALTK 261
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G++ SWG + LGHG + + + P+++ LE V + A G H+A +
Sbjct: 262 SGQLWSWGGNANHELGHGTRA---------NNWKPKVVAALEDVTLVQVACGGFHAAALT 312
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
++G+V TWG NG LG G+++ P V
Sbjct: 313 QDGKV------------------------------ITWGYGGNGQLGHGTLENGKEPAIV 342
Query: 315 QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG-HGNDVDY 372
+ ++ ++CG TAAI+E G + TWG + QLG G +
Sbjct: 343 EA-MADKTCTYIACGPAWTAAITENGDLYTWGKNRDY------------QLGIPGLKDEQ 389
Query: 373 IHPTIVNFGE------NVKALQVSCGFNH 395
+ P +V F + V+ L VSCG NH
Sbjct: 390 LDPVLVQFPQALHEKTPVEVLGVSCGANH 418
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 134/305 (43%), Gaps = 52/305 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND-FG 101
WG G +G LG GS E P + K + ++ GG+H+ +TE+G +Y G ++ G
Sbjct: 159 WGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHSAAVTESGELYTWGRDEGEG 218
Query: 102 QLGISE----NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LG + G P ++ L + + G + A+T G+L+ WG N+N +LG
Sbjct: 219 RLGHGNPDIMDEGALSRPTKVQALDVPIASVYCGGFFTMALTKSGQLWSWGGNANHELGH 278
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G +A P V L + Q A G + A+T GKV++WG GG+G+LGHG
Sbjct: 279 GTRANNWKP--KVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNGQLGHGT---- 332
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
L + E P +++ + A G +A I EN
Sbjct: 333 ---LENGKE--PAIVEAMADKTCTYIACGPAWTAAITEN--------------------- 366
Query: 278 ARRPSLISGGELYTWGSNENGCLGI-GSIDVLHSPERVQGP---FSESPVDQ--VSCGWK 331
G+LYTWG N + LGI G D P VQ P ++PV+ VSCG
Sbjct: 367 ---------GDLYTWGKNRDYQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGAN 417
Query: 332 HTAAI 336
H I
Sbjct: 418 HGVCI 422
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 156/382 (40%), Gaps = 79/382 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA------------------CGGAHTL 84
WG G +G++G GS ++ PV+ S + + +A CG H++
Sbjct: 40 WGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGLFHSV 99
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
E V+ G D G+LGI +P ++ K V S G H+ A+T G +
Sbjct: 100 LFAEQD-VFVWGKGDGGRLGIDTEFN-QYKPY-VNPRIKRVQMASAGGLHNIALTEVGNV 156
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSW 201
Y WG + G LG G +++P L G + + + G S AVT G++ +W
Sbjct: 157 YTWGYGAFGALGHGSYERELLP-----RLLEGPWKDRIVHVSAGGSHSAAVTESGELYTW 211
Query: 202 GAG-GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
G G GRLGHG + + P ++ L+ + GF A
Sbjct: 212 GRDEGEGRLGHGNPD----IMDEGALSRPTKVQALDVPIASVYCGGFFTMA--------- 258
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
L G+L++WG N N LG G+ P +V +
Sbjct: 259 ----------------------LTKSGQLWSWGGNANHELGHGTRANNWKP-KVVAALED 295
Query: 321 SPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
+ QV+CG H AA++ +GK++TWG+GG+ GQLGHG + P IV
Sbjct: 296 VTLVQVACGGFHAAALTQDGKVITWGYGGN------------GQLGHGTLENGKEPAIVE 343
Query: 380 FGENVKALQVSCGFNHTGALLE 401
+ ++CG T A+ E
Sbjct: 344 AMADKTCTYIACGPAWTAAITE 365
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 137/310 (44%), Gaps = 67/310 (21%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI---PTKVECLSGIFTKQAALGFEQ--- 188
SS + E++ WG+ ++GQ+G G + + +P+ K+ +G+ Q + +
Sbjct: 28 SSGEPAELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLG 87
Query: 189 SVAVTGG---------GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
+V VT G V WG G GRLG E ++Y P + ++ +
Sbjct: 88 NVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTE---------FNQYKPYVNPRIK--R 136
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAV----------------------DKMLFQEGNH 277
V++A+AG LH+ + E G VY +G A D+++
Sbjct: 137 VQMASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGG 196
Query: 278 ARRPSLISGGELYTWGSNE-NGCLGIGSIDV-----LHSPERVQGPFSESPVDQVSCGWK 331
+ ++ GELYTWG +E G LG G+ D+ L P +VQ + P+ V CG
Sbjct: 197 SHSAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQA--LDVPIASVYCGGF 254
Query: 332 HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 391
T A+++ L W WGG+ + +LGHG + P +V E+V +QV+C
Sbjct: 255 FTMALTKSGQL-WSWGGN----------ANHELGHGTRANNWKPKVVAALEDVTLVQVAC 303
Query: 392 GFNHTGALLE 401
G H AL +
Sbjct: 304 GGFHAAALTQ 313
>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
Length = 5118
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 149/319 (46%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P + ++ +K +A GG H L LT+ G +++ G + G
Sbjct: 3312 GEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDG 3371
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG ++ +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3372 KLGHGNSVSLD-KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDT 3430
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A ++ P V+ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3431 ATQM--KPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG----- 3483
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S YTP LI L G+ V G S + + G V+ +G ++ +H
Sbjct: 3484 ----SDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3539
Query: 279 RRPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R+P+L+ G G++Y WG N++G G GS V P V
Sbjct: 3540 RKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHE 3599
Query: 317 PFSESPVDQVSCGWKHTAA 335
++ V++VSCG H+ A
Sbjct: 3600 -LDDARVNRVSCGSSHSIA 3617
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 139/323 (43%), Gaps = 38/323 (11%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G +S P + + + +K +A GG H L L+ G VY+ G D G
Sbjct: 4317 GYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4376
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + Y L L E+V I+ G HHS+AIT G LY WGK G+LG G
Sbjct: 4377 KLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSE 4436
Query: 162 AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P VE L A G Q++ VT V SWG G G+LG G
Sbjct: 4437 DQL--TPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4488
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P I+ L G+ V G S + +G +Y +G ++ +H R
Sbjct: 4489 ---SDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVR 4545
Query: 280 RPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
RP ++ GE++TWG N+ G LG G+ L P V
Sbjct: 4546 RPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHA- 4604
Query: 318 FSESPVDQVSCGWKHTAAISEGK 340
+ +V+CG HT A S K
Sbjct: 4605 LQGKKITRVACGSAHTLAWSTMK 4627
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 166/385 (43%), Gaps = 55/385 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG PV+C + L G L +T G VYATG G+
Sbjct: 4264 WGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGAAGR 4323
Query: 103 LGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
LGI S + LE ++ +KK V +++G H A++ +G +Y WG+ +G+LG G
Sbjct: 4324 LGIGGTDSVMVPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHG 4381
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ + P +E L G A G S A+T G + +WG G GRLGHG
Sbjct: 4382 NRL--MYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD----- 4434
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S + TP+L++ L+ KV A +G + C+ ++ V+ +GD K+ +
Sbjct: 4435 ----SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSD 4490
Query: 277 HARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
+ P +L G +YTWG + LG G+ D + P +V
Sbjct: 4491 GCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKV 4550
Query: 315 QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
+ ++ G H A ++ G++ TW G + GQLG G
Sbjct: 4551 AA-LQGKKIISIATGSLHCVACTDKGEVFTW------------GDNDEGQLGDGTTSALQ 4597
Query: 374 HPTIVNFGENVKALQVSCGFNHTGA 398
P +V+ + K +V+CG HT A
Sbjct: 4598 RPRLVHALQGKKITRVACGSAHTLA 4622
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 158/350 (45%), Gaps = 77/350 (22%)
Query: 92 VYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
VY GLND QLG + + L+P+ I+G K + +S +
Sbjct: 3256 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQ----------E 3305
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G+ +NG+LGLG + + P + LS K+ A+ G + ++A+T GK+
Sbjct: 3306 GKLYACGEGTNGRLGLGDDSN--VCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIF 3363
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G G+LGHG S S PRLI+ L+ +++ A G HSA I +G +
Sbjct: 3364 SWGEGEDGKLGHGN---------SVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGEL 3414
Query: 260 YIFG-----------------DRAVDKMLFQE-------GNHARRPSLISGGELYTWGSN 295
Y +G + V ++ Q A+ +L + G +Y+WG
Sbjct: 3415 YTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDG 3474
Query: 296 ENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 351
+ G LG G D ++P +R+ G V Q+ CG + + A+++ G++ TWG G
Sbjct: 3475 DFGKLGRGGSDGCYTPLLIDRLNG----LGVVQIECGAQFSLALTKYGEVWTWGKGDYF- 3529
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHGND PT+V K + V+ G H A+ +
Sbjct: 3530 -----------RLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTD 3568
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 149/337 (44%), Gaps = 51/337 (15%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
+G +Y G N GQLG E L L S VQ++ G A+T DG++Y G
Sbjct: 4258 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATG 4317
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGS 206
+ G+LG+G + +PT +E + +F K+ A+ G + +A++ G V SWG G
Sbjct: 4318 YGAAGRLGIG--GTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDD 4375
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--- 263
G+LGHG L + R P+LI+EL G ++ A G HSA I G +Y +G
Sbjct: 4376 GKLGHGNR---LMYDR------PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 4426
Query: 264 ----------DRAVDKMLFQEGNH-----------ARRPSLISGGELYTWGSNENGCLGI 302
D+ K++ ++ A+ + +++WG + G LG
Sbjct: 4427 YGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4486
Query: 303 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 361
G D P +++ + V +V CG + + A++ G I TWG G H
Sbjct: 4487 GGSDGCKIPMKIES-LAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYH----------- 4534
Query: 362 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+LGHG D P V + K + ++ G H A
Sbjct: 4535 -RLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA 4570
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 122/270 (45%), Gaps = 45/270 (16%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
G H L LT+ VY+ G D G+LG + + Y L + + K + I+ G +S+ ++
Sbjct: 506 GTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLS 565
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGK 197
+GELY WG+ + G+LG G + + IPT V L+G A G Q++ VT G
Sbjct: 566 SNGELYTWGRGNYGRLGHGN--SDNVLIPTLVTALNGHMVVYVACGSGDSQTLCVTASGI 623
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V SWG G G+LG G TP+++ +L + V
Sbjct: 624 VFSWGDGNYGKLGRGG---------CDGSKTPKIVDKLLDINV----------------A 658
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
+VY G + +L + GE+YTWG E LG G+ + + P+ ++
Sbjct: 659 KVYCGGQFSA--------------ALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEV- 703
Query: 318 FSESPVDQVSCGWKHTAAISEGKILTWGWG 347
V ++ G H A++E + L +GWG
Sbjct: 704 LKPKKVKELCVGNFHVLALTEDQ-LVYGWG 732
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 107/230 (46%), Gaps = 27/230 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNGD GRLG G P + A ++ +ACG ++ L+ G +Y G ++G+
Sbjct: 521 WGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGR 580
Query: 103 L--GISENIGYSLEPLRISGLKKEV---VQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
L G S+N+ L P ++ L + V +G + +T G ++ WG + G+LG
Sbjct: 581 LGHGNSDNV---LIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGR 637
Query: 158 ----GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
G K K+ V+ L I + G + S A+T G+V +WG G RLGHG
Sbjct: 638 GGCDGSKTPKI------VDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGN 691
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
E I P++I+ L+ KVK G H + E+ VY +G
Sbjct: 692 EEHI---------RYPKVIEVLKPKKVKELCVGNFHVLALTEDQLVYGWG 732
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 98/237 (41%), Gaps = 47/237 (19%)
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A+T V SWG G GRLGHG P+L++ L + A G +
Sbjct: 510 LALTQDSSVYSWGNGDGGRLGHGDR---------VWYDEPKLVEALVDKNITFIACGSTY 560
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------- 286
SA + NG +Y +G ++ ++ P+L++
Sbjct: 561 SAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACGSGDSQTLCVTA 620
Query: 287 -GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 344
G +++WG G LG G D +P ++ + V +V CG + +AA++ G++ TW
Sbjct: 621 SGIVFSWGDGNYGKLGRGGCDGSKTP-KIVDKLLDINVAKVYCGGQFSAALTAYGEVYTW 679
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G G G +LGHGN+ +P ++ + K ++ G H AL E
Sbjct: 680 GKG------------EGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLALTE 724
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+YG+LG G + P + ++ + CGG + LT G VY G + +
Sbjct: 627 WGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYR 686
Query: 103 LG--ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG E+I Y P I LK K+V ++ G H A+T D +Y WG+N GQ +
Sbjct: 687 LGHGNEEHIRY---PKVIEVLKPKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQ--IDP 741
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
++P PT LSG A G QS A
Sbjct: 742 ALGTIVPEPTLCPTLSGKNIIGLACGLTQSFA 773
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 29/141 (20%)
Query: 274 EGNHARRPSLISGGE-----------LYTWGSNENGCLGIGSIDVLHSP---ERVQGPFS 319
E A RP ++GGE +Y G G LGIG D + P E +Q F
Sbjct: 4287 ESLSALRPVQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFV 4346
Query: 320 ESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
+ V+ G KH A+S EG + +WG G G+LGHGN + Y P ++
Sbjct: 4347 KKVA--VNSGGKHCLALSSEGHVYSWGEGDD------------GKLGHGNRLMYDRPKLI 4392
Query: 379 NFGENVKALQVSCGFNHTGAL 399
+ + ++CG +H+ A+
Sbjct: 4393 EELLGTEIVDIACGGHHSAAI 4413
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 16/92 (17%)
Query: 311 PERVQGPFSESPVDQV---SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
P+RV G FSE PV + S G + A + + +WG G GG+LGHG
Sbjct: 486 PQRVYG-FSEKPVTMIASHSDGTHYLALTQDSSVYSWGNG------------DGGRLGHG 532
Query: 368 NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ V Y P +V + ++CG ++ L
Sbjct: 533 DRVWYDEPKLVEALVDKNITFIACGSTYSAVL 564
>gi|282722850|gb|ADA84471.1| retinitis pigmentosa GTPase regulator protein 1 [Danio rerio]
Length = 1697
Score = 121 bits (304), Expect = 5e-25, Method: Composition-based stats.
Identities = 107/392 (27%), Positives = 170/392 (43%), Gaps = 60/392 (15%)
Query: 7 TAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCS 66
+A ++ +LK DI + G + R F ++G+ + G+LGL +PV
Sbjct: 24 SAPSRLWLKSDIPVHISCGQSHSAFVTEQGRLF--VFGDNNRGQLGLQIKGPVTKPVCVK 81
Query: 67 AFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEV 125
+ +++ACG HTL T G + A G N GQLG+ N S + LR +
Sbjct: 82 VLKGERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPI 141
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
+S G H S+A+T DG L++WG NS GQLG G + ++P E G + G
Sbjct: 142 KLLSAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLP----QELNMGQSIHWVSCG 197
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+ S VT G V ++G GRLG L + + P+ ++ L V +++A
Sbjct: 198 YRHSALVTDSGDVYTFGESADGRLG-------LSAHQLANHSYPQRVESLRSV-LQVACG 249
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSI 305
G H+ + E+ ELY +G E G LG+G +
Sbjct: 250 G-KHTLALTED-------------------------------ELYCFGGGEFGQLGLGML 277
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 365
+ G F + V V+CG +H+A I++ +L TF + H G+LG
Sbjct: 278 VFVADSPVAVGHFRKDRVTHVTCGEQHSALITDSGLLY--------TFGDGRH---GKLG 326
Query: 366 HGND--VDYIHPTIVNFGENVKALQVSCGFNH 395
HG++ + PT+ + V+CG +H
Sbjct: 327 HGDENFTNQFTPTVCQRFFEYSVMTVACGSSH 358
Score = 89.0 bits (219), Expect = 4e-15, Method: Composition-based stats.
Identities = 91/322 (28%), Positives = 143/322 (44%), Gaps = 76/322 (23%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGEL 144
+ +TG V+ FG+ I+ + P R+ LK ++ V IS G HS+ +T G L
Sbjct: 7 IPDTGAVFT-----FGKSKIANS-----APSRL-WLKSDIPVHISCGQSHSAFVTEQGRL 55
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+++G N+ GQLGL K P+ KV L G + A G + ++ T G++L+ G
Sbjct: 56 FVFGDNNRGQLGLQIKGPVTKPVCVKV--LKGERAQSVACGTDHTLVSTSQGEILAAGGN 113
Query: 205 GSGRLGHGQESSILGF--LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G+LG G + + F LR +Y P +K+ +AG SA + E+GR
Sbjct: 114 SDGQLGLGHCNDSISFQRLRPFCDYAP----------IKLLSAGDHTSAALTEDGR---- 159
Query: 263 GDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
L+ WG N G LG G+ P+ + S
Sbjct: 160 --------------------------LFLWGDNSAGQLGFGNDSHALLPQELNMGQS--- 190
Query: 323 VDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND--VDYIHPTIVN 379
+ VSCG++H+A +++ G + T+G S+ G+LG ++ +P V
Sbjct: 191 IHWVSCGYRHSALVTDSGDVYTFG------------ESADGRLGLSAHQLANHSYPQRVE 238
Query: 380 FGENVKALQVSCGFNHTGALLE 401
+V LQV+CG HT AL E
Sbjct: 239 SLRSV--LQVACGGKHTLALTE 258
>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
Length = 1270
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 157/340 (46%), Gaps = 59/340 (17%)
Query: 44 GNGDYGRLG--LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
GN D+G+LG + SL ++ RP + +A E + + CG AH+L LT G VY+ G N G
Sbjct: 372 GNNDHGQLGHDVESLPNK-RPQLLTALENYIITQACCGTAHSLALTNWGQVYSWGSNAVG 430
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG + + P I + K+VVQI+ G++H A+T GELY WG N+ GQLGLG
Sbjct: 431 QLGQETDTTRQIIPRLIRSIAAKQVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMT 490
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
KV PT V+ L+G+ A G S AV+ G + WG G+LG +
Sbjct: 491 NEKV-STPTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLN----- 544
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S P ++ L + V+ + G ++ V+
Sbjct: 545 ----SRQFPTQLRTLRSLGVRYVSCG--------DDFSVF-------------------- 572
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SE 338
L +GG ++T G+ G LG GS + P R+ S + Q++CG +HT A S
Sbjct: 573 --LTAGGGVFTCGAGTFGQLGHGSCNNEILP-RMVFELMGSKITQIACGRRHTLAFVPSR 629
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
GKI +G G GQLG G +Y P IV
Sbjct: 630 GKIYGFGLSGV------------GQLGIGIVGNYNTPQIV 657
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 134/304 (44%), Gaps = 50/304 (16%)
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP--IPTKVECLSGIFTK 180
KE+ + + G H+ +T DG++Y G N +GQLG + +P P + L
Sbjct: 347 KEIARAACGASHTLLLTNDGKMYSCGNNDHGQLG---HDVESLPNKRPQLLTALENYIIT 403
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
QA G S+A+T G+V SWG+ G+L GQE+ +T + PRLI+ + +V
Sbjct: 404 QACCGTAHSLALTNWGQVYSWGSNAVGQL--GQETD------TTRQIIPRLIRSIAAKQV 455
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLIS-------------- 285
AAG H + +G +Y +G A ++ L P+L+
Sbjct: 456 VQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGG 515
Query: 286 --------GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
G ++ WG N G LG+ ++ P +++ S V VSCG + ++
Sbjct: 516 NHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLG-VRYVSCGDDFSVFLT 574
Query: 338 E-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
G + T G GTF GQLGHG+ + I P +V K Q++CG HT
Sbjct: 575 AGGGVFTCG----AGTF--------GQLGHGSCNNEILPRMVFELMGSKITQIACGRRHT 622
Query: 397 GALL 400
A +
Sbjct: 623 LAFV 626
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 111/245 (45%), Gaps = 32/245 (13%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ YG+LGLG + E P + + + +ACGG H+ ++++G ++ G N FG
Sbjct: 477 WGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFG 536
Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG+ S L LR G++ +S G S +T G ++ G + GQLG
Sbjct: 537 QLGLNDLNSRQFPTQLRTLRSLGVR----YVSCGDDFSVFLTAGGGVFTCGAGTFGQLGH 592
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQ--- 213
G ++ +P V L G Q A G ++A V GK+ +G G G+LG G
Sbjct: 593 GSCNNEI--LPRMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGVGQLGIGIVGN 650
Query: 214 -----------ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG---FLHSACIDENGRV 259
+S IL F SE IK + V++ + +A F ACI NG +
Sbjct: 651 YNTPQIVRGPWQSQILTFSVQMSEELAA-IKPDDTVELDLMSAVETIFKSLACI--NGSL 707
Query: 260 YIFGD 264
+ D
Sbjct: 708 LLPND 712
>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
Length = 1049
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 155/334 (46%), Gaps = 40/334 (11%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G LGLG +E + P E +++ +ACG +T+ +T+ G VY+ G ND+
Sbjct: 4 WGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGNNDY 63
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E L+ I GL V +I+ G H+ A+ G+L+ WG N NGQLGL
Sbjct: 64 GQLG-HEKARKRLQ--LIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQLGLNS 120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+P ++ L Q A G E S+A+T G++ +WG+ G+LG G
Sbjct: 121 VDCTE-RVPRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWGSNREGQLGLGS------ 173
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+T+E P+ I L V + A G H+ I ++G V+ +G ++ +
Sbjct: 174 --YTTTEIKPKRISTLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLGLNDVQQRN 231
Query: 280 RPS----------------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
P L G ++T G+ G LG G+ P +V
Sbjct: 232 LPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNEILPRQVMEL 291
Query: 318 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 349
S V Q+SCG +HT A+ S G++ WG GG+
Sbjct: 292 MG-STVTQISCGKRHTLALVPSRGRVYAWGLGGA 324
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 137/347 (39%), Gaps = 93/347 (26%)
Query: 101 GQLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ ENI E I V QI+ G +++ AIT +G++Y G N GQLG
Sbjct: 10 GELGLGGIEDENIFMPREVDFIEA--SNVEQIACGENYTVAITKEGKVYSCGNNDYGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
K ++ IP L ++ A G ++AV G++ SWG +G+LG
Sbjct: 68 HEKARKRLQLIPG----LDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQLGLNS--- 120
Query: 217 ILGFLRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+E PR+IK L V V+IA G HS
Sbjct: 121 -----VDCTERVPRMIKVLGTNVIVQIAC-GTEHSI------------------------ 150
Query: 276 NHARRPSLISGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTA 334
+L + GELY WGSN G LG+GS P+R+ + P+ ++CG HT
Sbjct: 151 ------ALTNDGELYAWGSNREGQLGLGSYTTTEIKPKRI-STLAAVPIAFIACGGYHTI 203
Query: 335 AISE-GKILTWGWGG--------------------------SHGTFSED----------- 356
IS+ G + +WG + T E+
Sbjct: 204 VISKSGAVFSWGRNTFGQLGLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMDGGV 263
Query: 357 ---GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
G GQLGHGN + I P V Q+SCG HT AL+
Sbjct: 264 FTCGAGMYGQLGHGNTTNEILPRQVMELMGSTVTQISCGKRHTLALV 310
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL ++ R P + CG ++FLT G V+ G +GQ
Sbjct: 214 WGRNTFGQLGLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLG 156
LG L + + V QIS G H+ A+ G +Y WG GQLG
Sbjct: 274 LGHGNTTNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 328
>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
Length = 1050
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 158/342 (46%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY G+N GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G HS A++ G+L+ WG S+GQLGL + +P ++ L+
Sbjct: 81 LADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGL-MTIEDSVAVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AG HS + +G V FG WG N G
Sbjct: 192 LAQVVAGGAHSFALSLSGAV--FG----------------------------WGMNNAGQ 221
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ SP V+ ++ V +SCG +HTA +++ G + T+G G
Sbjct: 222 LGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG----------- 269
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT A +
Sbjct: 270 -SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|357133876|ref|XP_003568548.1| PREDICTED: uncharacterized protein LOC100838586 [Brachypodium
distachyon]
Length = 1090
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 165/374 (44%), Gaps = 72/374 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + A +++ +ACG HT +T +G +Y G +F
Sbjct: 335 WGEESGGRLGHGVDCDVPQPKLVEALAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNF 394
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 395 GLLGHGNEVSHWM-PKRLNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHG 453
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 454 DRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDK 511
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L F AC
Sbjct: 512 GRLGHGDKDTRL---------VPTCVASL-------VEPNFCQVAC-------------- 541
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
H +L + G +YT GS+ G LG D + P RV+G ++ V+++
Sbjct: 542 ---------GHCFTVALTTSGHVYTMGSSVYGQLGNPQADGM-VPARVEGKLHKNFVEEI 591
Query: 327 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 385
SCG H A + S ++ TWG G + G+LGHG+ D PT+V ++ +
Sbjct: 592 SCGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRNSPTLVEALKDKQ 639
Query: 386 ALQVSCGFNHTGAL 399
V CG N T A+
Sbjct: 640 VRSVVCGINFTAAI 653
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 114/276 (41%), Gaps = 68/276 (24%)
Query: 142 GELYMWGKNS--------NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G+++MWG+ + N + G A +P +E + + + G + VT
Sbjct: 268 GDVFMWGEGTGEGILGGGNSRFGNSSGAKMDCLLPKPLEFAGRLDVQNISCGGRHATLVT 327
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG GRLGHG + + P+L++ L + +++ A G H+ +
Sbjct: 328 KQGEVYSWGEESGGRLGHGVDCDVP---------QPKLVEALAHMNIELVACGEYHTCAV 378
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSI----DVLH 309
G+LYTWG NG G + +V H
Sbjct: 379 ------------------------------TLSGDLYTWG---NGTFNFGLLGHGNEVSH 405
Query: 310 -SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
P+R+ GP V +SCG HTA + S G++ T+G G S G LGHG
Sbjct: 406 WMPKRLNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG------------SFGVLGHG 453
Query: 368 NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
+ P V + ++ ++ +CG HT A++E +
Sbjct: 454 DRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVM 489
>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
Length = 1010
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 146/318 (45%), Gaps = 45/318 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG RP + A E + ++CG H+L + G V+A G GQL
Sbjct: 46 GDNTQGQLGRRGKPREERPGLIKALETLLVGLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 105
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E P +I L +++Q+S G++HS A++ DG++Y WGKNS GQLGLGK+
Sbjct: 106 GIEECKEKIFTPKKIKTLTGIKIIQVSCGHYHSLALSEDGQVYSWGKNSQGQLGLGKEFP 165
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 166 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNTGQL------ALSGNNT 218
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + +NG+V+ FGD
Sbjct: 219 PVQRYKPHSIGALKSLDVIYISCGYEHTAVLTQNGKVFTFGD------------------ 260
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGK 340
N G LG P++V+G + V Q+ CG HT A + G+
Sbjct: 261 ------------NSCGQLGYNPTAKKRGPQQVEG--IDGLVSQIDCGSYHTLAYVYTTGE 306
Query: 341 ILTWGWG---GSHGTFSE 355
++++G G S T SE
Sbjct: 307 VVSFGRGRNCASSPTHSE 324
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 146/333 (43%), Gaps = 63/333 (18%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTG 131
++ ACG H+L L G V++ G N GQLG P I L+ +V +S G
Sbjct: 23 VRQAACGERHSLLLLSDGTVHSCGDNTQGQLG-RRGKPREERPGLIKALETLLVGLVSCG 81
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+ G ++ WG S GQLG+ + K+ P K++ L+GI Q + G S+A
Sbjct: 82 KEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIF-TPKKIKTLTGIKIIQVSCGHYHSLA 140
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ G+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS
Sbjct: 141 LSEDGQVYSWGKNSQGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSF 192
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDV---L 308
+L G + WGSN G L + +
Sbjct: 193 ------------------------------ALSLSGTSFGWGSNNTGQLALSGNNTPVQR 222
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
+ P + G V +SCG++HTA +++ GK+ T+ G +S GQLG+
Sbjct: 223 YKPHSI-GALKSLDVIYISCGYEHTAVLTQNGKVFTF------------GDNSCGQLGYN 269
Query: 368 NDVDYIHPTIVNFGENVKAL--QVSCGFNHTGA 398
P V E + L Q+ CG HT A
Sbjct: 270 PTAKKRGPQQV---EGIDGLVSQIDCGSYHTLA 299
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 123/282 (43%), Gaps = 56/282 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
EV Q + G HS + DG ++ G N+ GQLG K + P ++ L + +
Sbjct: 22 EVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPRE--ERPGLIKALETLLVGLVS 79
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG + + +TP+ IK L G+K+
Sbjct: 80 CGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKI--------FTPKKIKTLTGIKIIQV 131
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G HS + E+G+VY +WG N G LG+G
Sbjct: 132 SCGHYHSLALSEDGQVY------------------------------SWGKNSQGQLGLG 161
Query: 304 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
SP+RV+ P+ QV+ G H+ A+S ++GWG ++ G
Sbjct: 162 KEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGT-SFGWGSNNT----------G 209
Query: 363 QL---GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QL G+ V P + +++ + +SCG+ HT L +
Sbjct: 210 QLALSGNNTPVQRYKPHSIGALKSLDVIYISCGYEHTAVLTQ 251
>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
Length = 4856
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 162/331 (48%), Gaps = 55/331 (16%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4038 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4097
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4098 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4156
Query: 160 KAAKVIPIPTKVECLSGIFTKQA---------ALGFEQSVAVTGGGKVL-SWGAGGSGRL 209
+ K +P +V L G QA A G ++AV+ G ++ ++G G G+L
Sbjct: 4157 TSNK--KLPERVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGSMVWAFGDGDYGKL 4214
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVD 268
G G ST++ +P+ + L G+ +K A G S + ++G+VY FG DR +
Sbjct: 4215 GLGN---------STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGQVYTFGQDRLIG 4265
Query: 269 KMLFQEGNHARRP---------------------SLISGGELYTWGSNENGCLGIGSIDV 307
+ NH R +L S G++Y WGSN G LG+G +
Sbjct: 4266 LPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALTSTGDIYAWGSNSEGQLGLGHTNH 4325
Query: 308 LHSPERV---QGPFSESPVDQVSCGWKHTAA 335
+ P V QG V Q+S G H+AA
Sbjct: 4326 VREPTLVTVLQG----KNVRQISAGRCHSAA 4352
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 126/254 (49%), Gaps = 23/254 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4092 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4151
Query: 103 LGISENIGYSLEPLRISGL----------KKEVVQISTGYHHSSAITVDGEL-YMWGKNS 151
LG+ L P R++ L K + ++ G +H+ A++ DG + + +G
Sbjct: 4152 LGLGNTSNKKL-PERVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGSMVWAFGDGD 4210
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
G+LGLG AK P KV+ L GI K+ A G + SVA+T G+V ++G L
Sbjct: 4211 YGKLGLGNSTAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGQVYTFGQDRLIGLPE 4268
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G R+ + P+ + L GV ++ A G H+ + G +Y +G + ++
Sbjct: 4269 G---------RARNHNRPQQVPVLAGVVIEDVAVGAEHTLALTSTGDIYAWGSNSEGQLG 4319
Query: 272 FQEGNHARRPSLIS 285
NH R P+L++
Sbjct: 4320 LGHTNHVREPTLVT 4333
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + QVS G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQVSAGTSHSLAWTALPRDRQVVAW 745
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 129/298 (43%), Gaps = 60/298 (20%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVI 608
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 120/276 (43%), Gaps = 46/276 (16%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4017 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4074
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4075 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4125
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ ++ ++ + P ++ E Y G N
Sbjct: 4126 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARN------ 4179
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+S + V+CG HT A+S + W +G DG G+
Sbjct: 4180 ----------------KSIICSVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4213
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 4214 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4249
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQVSAGTSHSLAWTALPRDRQVVAW 745
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S ++T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQVSAGTSHS 730
>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
vitripennis]
Length = 1083
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 166/363 (45%), Gaps = 61/363 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ YG LGLG +E P + +++ +ACG HT+ +T+ G V++ G ND
Sbjct: 31 WGSTVYGELGLGGIEDENILMPRELDFQKATAVEQIACGETHTVLITKDGEVFSCGNNDS 90
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E L+ I GL + Q + G HS A+ G+L+ WG N++GQLGLG
Sbjct: 91 GQLG-HEKPTKRLQ--MIPGLDAFIFKQAACGASHSVAVNNWGQLFCWGSNADGQLGLGT 147
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P V+ L Q A G + ++A+T G++ +WG+ G+LG GQ+ I
Sbjct: 148 PLT-IAHTPRMVKALGTSIVVQIACGKKHTLALTNNGELYAWGSNSDGQLGLGQDVKI-- 204
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
E P+LI L + + A G HS + ++G V FG
Sbjct: 205 ------ETRPKLITGLATIPIAFIACGGYHSIVVSKSGAV--FG---------------- 240
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
WG N G LG+ I + P ++ + V V+CG + + ++ +
Sbjct: 241 ------------WGRNTFGQLGMNDISDKYVPCLLKT-LRNAKVKYVACGEEFSVFLTMD 287
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP-TIVNFGENVKALQVSCGFNHTG 397
G + T G G GQLGHG + + I P I+ +V Q+SCG HT
Sbjct: 288 GGVFTCGAGMY------------GQLGHGANSNEILPRQIIELMGSV-VTQISCGKRHTL 334
Query: 398 ALL 400
AL+
Sbjct: 335 ALV 337
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 111/221 (50%), Gaps = 14/221 (6%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ G+LGLG+ L P + A + +ACG HTL LT G +YA G N G
Sbjct: 135 WGSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTNNGELYAWGSNSDG 194
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ +++ P I+GL + I+ G +HS ++ G ++ WG+N+ GQLG+
Sbjct: 195 QLGLGQDVKIETRPKLITGLATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFGQLGMNDI 254
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ K +P K L K A G E SV +T G V + GAG G+LGHG S
Sbjct: 255 SDKYVPCLLKT--LRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLGHGANS----- 307
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVY 260
+E PR I EL G V + G H+ A + G+VY
Sbjct: 308 ----NEILPRQIIELMGSVVTQISCGKRHTLALVPSRGKVY 344
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 47/298 (15%)
Query: 119 SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
S K+ ++ T + I D +Y WG G+LGLG + I +P +++
Sbjct: 3 SAPKRLCIKADTFHLPLKLIPNDNNMYCWGSTVYGELGLGGIEDENILMPRELDFQKATA 62
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
+Q A G +V +T G+V S G SG+LGH + + L ++I L+
Sbjct: 63 VEQIACGETHTVLITKDGEVFSCGNNDSGQLGHEKPTKRL-----------QMIPGLDAF 111
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLI------------- 284
K AA G HS ++ G+++ +G A ++ L A P ++
Sbjct: 112 IFKQAACGASHSVAVNNWGQLFCWGSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIAC 171
Query: 285 ---------SGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
+ GELY WGSN +G LG+G + + P+ + G + P+ ++CG H+
Sbjct: 172 GKKHTLALTNNGELYAWGSNSDGQLGLGQDVKIETRPKLITG-LATIPIAFIACGGYHSI 230
Query: 335 AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
+S+ + +GWG TF GQLG + D P ++ N K V+CG
Sbjct: 231 VVSKSGAV-FGWG--RNTF--------GQLGMNDISDKYVPCLLKTLRNAKVKYVACG 277
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG+ + ++ P + +K +ACG ++FLT G V+ G +GQ
Sbjct: 241 WGRNTFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQ 300
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMW 147
LG N L I + V QIS G H+ A+ G++Y W
Sbjct: 301 LGHGANSNEILPRQIIELMGSVVTQISCGKRHTLALVPSRGKVYAW 346
>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
Length = 1050
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 157/342 (45%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY G N GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGANTKGQLG-HEREGN--KPEQIGA 80
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AG HS + +G V FG WG N G
Sbjct: 192 LAQVVAGGAHSFALSLSGAV--FG----------------------------WGMNNAGQ 221
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ SP V+ ++ V +SCG +HTA +++ G + T+G G
Sbjct: 222 LGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG----------- 269
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT A +
Sbjct: 270 -SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 138/321 (42%), Gaps = 56/321 (17%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG+ P I
Sbjct: 74 KPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++Q+S G H A+ DG+ + WG+NS+GQLGLGK+ P +V L GI
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQAS-PQRVRSLEGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q G S A++ G V WG +G+LG E +P +K L K
Sbjct: 193 AQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
V + G H+A + ++G V +T+G+ G
Sbjct: 244 VVYISCGEEHTAVLTKSGGV------------------------------FTFGAGSCGQ 273
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDG 357
LG S++ +P RV S V Q++CG +HT A S G I +G G
Sbjct: 274 LGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR-------- 324
Query: 358 HSSGGQLGHGNDVDYIHPTIV 378
GQLG G+ + P+ V
Sbjct: 325 ----GQLGTGHTCNVKCPSPV 341
>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 778
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 166/379 (43%), Gaps = 51/379 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G+ +R PV S + A+A GG HT LT +G V+ G N +GQ
Sbjct: 179 WGDNYYGQLGDGTTTNRRTPVAVSGLPS-GVTAIAAGGLHTCALTGSGEVWCWGYNYYGQ 237
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG P + GL + I+ G H+ A+ G ++ WG+N +GQLG G
Sbjct: 238 LGDGTTTYSRSTPAAVGGLPSGMTAIAAGGLHTCALMSSGGVWCWGRNDSGQLGDGSDTD 297
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P+ V L T AA G + A+TG G+V WG G G+LG G
Sbjct: 298 SSTPV--AVSGLPSGVTAIAA-GDYHTCALTGSGEVWCWGGNGFGQLGDGT--------- 345
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ TP + L V+ AAG H+ + +G V+ +G ++ P+
Sbjct: 346 TTARSTPAAVSGLP-SGVETIAAGDYHTCALMSSGGVWCWGRNNSGQLGDGTTTARSTPA 404
Query: 283 LISG---------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+SG G ++ WG N +G LG GS +P V G S
Sbjct: 405 AVSGLPSGVTAIAAGGLHTCALMSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSG--LAS 462
Query: 322 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
V+ ++ G HT A+ S G + W G ++ GQLG G+ + +I P V+
Sbjct: 463 GVETIAAGGWHTCALTSSGGVWCW------------GRNNSGQLGDGSTIYHITPVAVS- 509
Query: 381 GENVKALQVSCGFNHTGAL 399
G ++ G HT AL
Sbjct: 510 GLPSGVTAIAAGDYHTCAL 528
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 158/358 (44%), Gaps = 51/358 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG GS PV S ++ +A GG HT LT +G V+ G N+ GQ
Sbjct: 435 WGLNNSGQLGDGSDTDSSTPVAVSGLAS-GVETIAAGGWHTCALTSSGGVWCWGRNNSGQ 493
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I Y + P+ +SGL V I+ G +H+ A+T G ++ WG N +GQLG G
Sbjct: 494 LGDGSTI-YHITPVAVSGLPSGVTAIAAGDYHTCALTGSGGVWCWGYNLSGQLGDGTTTD 552
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L+ T AA F + A+T G V WGA G+LG G
Sbjct: 553 RSTPV--AVSGLTSGVTVIAAGRF-HTCALTSSGGVWCWGANFDGQLGDGT--------- 600
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ TP + L IAA G+ H+ + +G V+ +GD ++ + P
Sbjct: 601 TTNRTTPVAVSGLPSGVTAIAAGGW-HTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPG 659
Query: 283 LISG---------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+SG GE++ WG N G LG G+ +P V G S
Sbjct: 660 AVSGLPSGVTAIAAGWEHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSG--LPS 717
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
V ++ G HT A++ G ++ W G++ GQLG G + P V
Sbjct: 718 GVTAIAAGVYHTCALTGSGGVMCW------------GNNGDGQLGDGRPLYRTTPVDV 763
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 163/387 (42%), Gaps = 63/387 (16%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LG G+ SR P + A+A GG HT L +G V+ G ND G
Sbjct: 230 WGYNYYGQLGDGTTTYSRSTPAAVGGLPS-GMTAIAAGGLHTCALMSSGGVWCWGRNDSG 288
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG + S P+ +SGL V I+ G +H+ A+T GE++ WG N GQLG G
Sbjct: 289 QLGDGSDTDSS-TPVAVSGLPSGVTAIAAGDYHTCALTGSGEVWCWGGNGFGQLGDGTTT 347
Query: 162 AKVIP-----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
A+ P +P+ VE + A G + A+ G V WG SG+LG G
Sbjct: 348 ARSTPAAVSGLPSGVETI--------AAGDYHTCALMSSGGVWCWGRNNSGQLGDGT--- 396
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+T+ TP + L IAA G LH+ + +G V+ +G ++
Sbjct: 397 ------TTARSTPAAVSGLPSGVTAIAAGG-LHTCALMSSGGVWCWGLNNSGQLGDGSDT 449
Query: 277 HARRPSLISG---------------------GELYTWGSNENGCLGIGSIDVLHSPERVQ 315
+ P +SG G ++ WG N +G LG GS +P V
Sbjct: 450 DSSTPVAVSGLASGVETIAAGGWHTCALTSSGGVWCWGRNNSGQLGDGSTIYHITPVAVS 509
Query: 316 GPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G S V ++ G HT A++ G + WG ++ GQLG G D
Sbjct: 510 G--LPSGVTAIAAGDYHTCALTGSGGVWCWG------------YNLSGQLGDGTTTDRST 555
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V+ G ++ G HT AL
Sbjct: 556 PVAVS-GLTSGVTVIAAGRFHTCALTS 581
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 160/381 (41%), Gaps = 51/381 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D+G+LG G+ +R P S + A+A G HT LT +G V G N GQ
Sbjct: 77 WGGNDFGQLGDGTPTTRSTPGAVSGLPS-GVTAIAAGNYHTCALTGSGGVRCWGANYSGQ 135
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG G S P +SGL V I+ G H+ A+ G + WG N GQLG G
Sbjct: 136 LGNGLTFGRS-TPGAVSGLPSGVTAIAAGGDHTCALMSSGGVMCWGDNYYGQLGDGTTTN 194
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L T AA G + A+TG G+V WG G+LG G + + R
Sbjct: 195 RRTPV--AVSGLPSGVTAIAAGGL-HTCALTGSGEVWCWGYNYYGQLGDGTTT----YSR 247
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
S TP + L IAA G LH+ + +G V+ +G ++ + P
Sbjct: 248 S----TPAAVGGLPSGMTAIAAGG-LHTCALMSSGGVWCWGRNDSGQLGDGSDTDSSTPV 302
Query: 283 LISG---------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+SG GE++ WG N G LG G+ +P V G S
Sbjct: 303 AVSGLPSGVTAIAAGDYHTCALTGSGEVWCWGGNGFGQLGDGTTTARSTPAAVSG--LPS 360
Query: 322 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
V+ ++ G HT A+ S G + W G ++ GQLG G P V+
Sbjct: 361 GVETIAAGDYHTCALMSSGGVWCW------------GRNNSGQLGDGTTTARSTPAAVS- 407
Query: 381 GENVKALQVSCGFNHTGALLE 401
G ++ G HT AL+
Sbjct: 408 GLPSGVTAIAAGGLHTCALMS 428
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 157/364 (43%), Gaps = 61/364 (16%)
Query: 66 SAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
S+F + A+A GGAHT LT +G V G NDFGQLG S P +SGL
Sbjct: 47 SSFSPLQGVTAIAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRS-TPGAVSGLPSG 105
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP-----IPTKVECLSGIFT 179
V I+ G +H+ A+T G + WG N +GQLG G + P +P+ V +
Sbjct: 106 VTAIAAGNYHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSGVTAI----- 160
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
A G + + A+ G V+ WG G+LG G +T+ TP + L
Sbjct: 161 ---AAGGDHTCALMSSGGVMCWGDNYYGQLGDGT---------TTNRRTPVAVSGLPSGV 208
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--------PS--------- 282
IAA G LH+ + +G V+ +G ++ ++R PS
Sbjct: 209 TAIAAGG-LHTCALTGSGEVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPSGMTAIAAGG 267
Query: 283 -----LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
L+S G ++ WG N++G LG GS +P V G S V ++ G HT A++
Sbjct: 268 LHTCALMSSGGVWCWGRNDSGQLGDGSDTDSSTPVAVSG--LPSGVTAIAAGDYHTCALT 325
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
G W WGG+ F GQLG G P V+ G ++ G HT
Sbjct: 326 -GSGEVWCWGGNG--F--------GQLGDGTTTARSTPAAVS-GLPSGVETIAAGDYHTC 373
Query: 398 ALLE 401
AL+
Sbjct: 374 ALMS 377
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G+ +R P S + A+A G HT LT +G V+ G N +GQ
Sbjct: 639 WGDNYYGQLGDGTTTNRSTPGAVSGLPS-GVTAIAAGWEHTCALTSSGEVWCWGDNYYGQ 697
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P +SGL V I+ G +H+ A+T G + WG N +GQLG G+
Sbjct: 698 LGDGTTTNRS-TPGAVSGLPSGVTAIAAGVYHTCALTGSGGVMCWGNNGDGQLGDGRPLY 756
Query: 163 KVIPIPTKVECLSGIF 178
+ P+ G++
Sbjct: 757 RTTPVDVVTSASWGVY 772
>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
Length = 1052
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 145/339 (42%), Gaps = 58/339 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G DYG+LG +R PV E H++ +ACG HTL E G V+A G N GQ
Sbjct: 58 FGLNDYGQLGHCRSRTRAEPV--DGLEAHNITQVACGAQHTLAQNEWGEVFAWGSNSNGQ 115
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG++ P + L K+VVQI+ G HS A+T GE+Y WG NS+GQLGLG
Sbjct: 116 LGLNVEESMMPTPKMVKSLATKQVVQIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSG 175
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P V+ L GI + G + S AVT G V WG G+LG G
Sbjct: 176 TPETK-PCLVKLLQGIPISHISCGADFSFAVTPSGAVYGWGKNSFGQLGLGD-------- 226
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+T P +K L +V G H+A + +G V+ FG G + +
Sbjct: 227 -TTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTFG----------AGMYGQLG 275
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEG 339
S E+ P +V + V Q+ CG HT A S+G
Sbjct: 276 HCTSANEML--------------------PRKVLELMGTT-VTQICCGRCHTLAFVPSKG 314
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
+I +G GGS GQLG + + P +V
Sbjct: 315 RIYAFGLGGS------------GQLGTKSTANVNSPQLV 341
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 148/326 (45%), Gaps = 59/326 (18%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSS 136
CG HT+ + + G +++ GLND+GQLG + + EP + GL+ + Q++ G H+
Sbjct: 41 CGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRA-EP--VDGLEAHNITQVACGAQHTL 97
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
A GE++ WG NSNGQLGL + + ++P P V+ L+ Q A G S+A+T G
Sbjct: 98 AQNEWGEVFAWGSNSNGQLGLNVEES-MMPTPKMVKSLATKQVVQIACGRSHSMALTNVG 156
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
++ WG+ G+LG G T E P L+K L+G+ + H +C
Sbjct: 157 EIYCWGSNSHGQLGLGSS--------GTPETKPCLVKLLQGIPIS-------HISC---- 197
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ- 315
G + F A PS G +Y WG N G LG+G D P+ Q
Sbjct: 198 GADFSF---------------AVTPS----GAVYGWGKNSFGQLGLG--DTTDRPQPTQL 236
Query: 316 GPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
V + CG HTAA++ +G + T+G G GQLGH + +
Sbjct: 237 KSLRFQRVTYIRCGMDHTAALTRDGGVFTFGAGMY------------GQLGHCTSANEML 284
Query: 375 PTIVNFGENVKALQVSCGFNHTGALL 400
P V Q+ CG HT A +
Sbjct: 285 PRKVLELMGTTVTQICCGRCHTLAFV 310
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 53/279 (18%)
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
L ++VQ+ G +H+ + DG+L+ +G N GQLG + + P V+ L
Sbjct: 32 LVDDIVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEP----VDGLEAHNIT 87
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q A G + ++A G+V +WG+ +G+LG E S++ TP+++K L +V
Sbjct: 88 QVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMP--------TPKMVKSLATKQV 139
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCL 300
A G HS +L + GE+Y WGSN +G L
Sbjct: 140 VQIACGRSHSM------------------------------ALTNVGEIYCWGSNSHGQL 169
Query: 301 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 360
G+GS + + P+ +SCG + A++ + +GW G +S
Sbjct: 170 GLGSSGTPETKPCLVKLLQGIPISHISCGADFSFAVTPSGAV-YGW----------GKNS 218
Query: 361 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
GQLG G+ D PT + + + CG +HT AL
Sbjct: 219 FGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAAL 257
>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
glaber]
Length = 3493
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 160/329 (48%), Gaps = 53/329 (16%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 2677 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 2736
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 2737 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 2795
Query: 160 KAAKVIPIPTKVECLSGIFTKQA-------ALGFEQSVAV-TGGGKVLSWGAGGSGRLGH 211
+ K +P +V L G QA A G ++AV T G V ++G G G+LG
Sbjct: 2796 TSNK--KLPERVTALEGYQIGQAWNKSYSVACGLNHTLAVSTDGSMVWAFGDGDYGKLGL 2853
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKM 270
G ST++ +P+ + L G+ +K A G S + ++G VY FG DR +
Sbjct: 2854 GN---------STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLP 2904
Query: 271 LFQEGNHARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLH 309
+ NH R +L S G++Y WGSN G LG+G + +
Sbjct: 2905 EGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVR 2964
Query: 310 SPERV---QGPFSESPVDQVSCGWKHTAA 335
P V QG + Q+S G H+AA
Sbjct: 2965 EPTLVTVLQG----KNIRQISAGRCHSAA 2989
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 125/252 (49%), Gaps = 21/252 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 2731 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 2790
Query: 103 LGISENIGYSLEPLRISGLK--------KEVVQISTGYHHSSAITVDGEL-YMWGKNSNG 153
LG+ L P R++ L+ + ++ G +H+ A++ DG + + +G G
Sbjct: 2791 LGLGNTSNKKL-PERVTALEGYQIGQAWNKSYSVACGLNHTLAVSTDGSMVWAFGDGDYG 2849
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+LGLG AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 2850 KLGLGNSTAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG- 2906
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
R+ + P+ + L GV ++ A G H+ + G VY +G + ++
Sbjct: 2907 --------RARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 2958
Query: 274 EGNHARRPSLIS 285
NH R P+L++
Sbjct: 2959 HTNHVREPTLVT 2970
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 117/276 (42%), Gaps = 48/276 (17%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 2656 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 2713
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 2714 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 2764
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ ++ ++ + P ++ E Y G N
Sbjct: 2765 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQAWNKSYS-- 2822
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
V+CG HT A+S + W +G DG G+
Sbjct: 2823 ----------------------VACGLNHTLAVSTDGSMVWAFG--------DGDY--GK 2850
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 2851 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 2886
>gi|444914429|ref|ZP_21234572.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444714661|gb|ELW55540.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 648
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 121/378 (32%), Positives = 175/378 (46%), Gaps = 54/378 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS +S PV + A++ G H+L L G V+A G N GQ
Sbjct: 20 WGGNALGQLGDGSSDSHSEPVRVRGLSG--VVAVSAGEGHSLALHRDGTVWAWGDNALGQ 77
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + +S EP+R+ GL VV +S G +HS A+ DG ++ WG N++ QLG G A
Sbjct: 78 LGDGTSDSHS-EPVRVPGLSG-VVAVSAGDNHSLALRSDGSVWAWGDNNSDQLG-GAPGA 134
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P ++E LS + A G S+AV G V +WG +G+LG G IL
Sbjct: 135 QSYSVPWRLEDLSEVVA--VAAGGNHSLAVRADGTVWAWGDNFAGQLGDGN---IL---- 185
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---------LFQ 273
T+ + P+ ++ L GV A+AG+ HS +G V+ +G+ ++
Sbjct: 186 -TTRWLPKQVQGLSGVVA--ASAGWAHSMVALSDGSVWAWGNNTSGQLGNGISVGYGALP 242
Query: 274 EGNHARRP------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
E R +L S G L+ WGSN++G G GS L S RV+ S
Sbjct: 243 EQVQGLRGVMAVAAGGLYSLALRSDGTLWAWGSNDHGQRGDGSTVYLSSSVRVR---WLS 299
Query: 322 PVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
V ++ G H+ A+ L W WG ++ GQLG G D+ P V
Sbjct: 300 GVVAMAAGSAHSLAVRSDGTL-WAWGANY----------YGQLGDGTRKDHDTPKRVQGL 348
Query: 382 ENVKALQVSCGFNHTGAL 399
V A V+ G H+ AL
Sbjct: 349 SRVVA--VAAGDGHSIAL 364
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 169/376 (44%), Gaps = 57/376 (15%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ G+LG G+ L +RW P + A + G AH++ G V+A G N G
Sbjct: 171 WGDNFAGQLGDGNILTTRWLPKQVQGLSG--VVAASAGWAHSMVALSDGSVWAWGNNTSG 228
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG ++GY P ++ GL+ V+ ++ G +S A+ DG L+ WG N +GQ G G
Sbjct: 229 QLGNGISVGYGALPEQVQGLRG-VMAVAAGGLYSLALRSDGTLWAWGSNDHGQRGDGSTV 287
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +V LSG+ A G S+AV G + +WGA G+LG G
Sbjct: 288 --YLSSSVRVRWLSGVVAMAA--GSAHSLAVRSDGTLWAWGANYYGQLGDGTR------- 336
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
TP+ ++ L +V AAG HS + +G V+ +G ++ N + P
Sbjct: 337 --KDHDTPKRVQGLS--RVVAVAAGDGHSIALCADGTVWTWGYNHDGQLAHGSTNDSPVP 392
Query: 282 --------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+++S G ++ WG N G LG GS+ P RVQG S
Sbjct: 393 LHVRELSGVVAVAAGALHSLAVLSDGSVWAWGYNRQGQLGDGSLSSSAEPVRVQG---LS 449
Query: 322 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
V VS G H+ A ++G + W WGG +S GQLG G + + P V
Sbjct: 450 GVAAVSAGLNHSLARGTDGGV--WAWGG----------NSFGQLGEGTTSNALVPVRVRG 497
Query: 381 GENVKALQVSCGFNHT 396
V+ +S GFNH+
Sbjct: 498 LSGVE--TISAGFNHS 511
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 174/380 (45%), Gaps = 54/380 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ +S PV + A++ G H+L L G V+A G N+ Q
Sbjct: 70 WGDNALGQLGDGTSDSHSEPVRVPGLSG--VVAVSAGDNHSLALRSDGSVWAWGDNNSDQ 127
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P R+ L EVV ++ G +HS A+ DG ++ WG N GQLG G
Sbjct: 128 LGGAPGAQSYSVPWRLEDLS-EVVAVAAGGNHSLAVRADGTVWAWGDNFAGQLGDGNILT 186
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+P +V+ LSG+ A G+ S+ G V +WG SG+LG+G +G+
Sbjct: 187 TRW-LPKQVQGLSGVVAASA--GWAHSMVALSDGSVWAWGNNTSGQLGNGIS---VGY-- 238
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD------------------ 264
P ++ L GV AAG L+S + +G ++ +G
Sbjct: 239 ---GALPEQVQGLRGVMA--VAAGGLYSLALRSDGTLWAWGSNDHGQRGDGSTVYLSSSV 293
Query: 265 --RAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
R + ++ A ++ S G L+ WG+N G LG G+ +P+RVQG S
Sbjct: 294 RVRWLSGVVAMAAGSAHSLAVRSDGTLWAWGANYYGQLGDGTRKDHDTPKRVQG---LSR 350
Query: 323 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
V V+ G H+ A+ ++G + TWG ++ D GQL HG+ D P ++
Sbjct: 351 VVAVAAGDGHSIALCADGTVWTWG-------YNHD-----GQLAHGSTND--SPVPLHVR 396
Query: 382 ENVKALQVSCGFNHTGALLE 401
E + V+ G H+ A+L
Sbjct: 397 ELSGVVAVAAGALHSLAVLS 416
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 147/326 (45%), Gaps = 65/326 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+L GS PV E + A+A G H+L + G V+A G N GQ
Sbjct: 373 WGYNHDGQLAHGSTNDS--PVPLHVRELSGVVAVAAGALHSLAVLSDGSVWAWGYNRQGQ 430
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ S EP+R+ GL V +S G +HS A DG ++ WG NS GQLG G +
Sbjct: 431 LG-DGSLSSSAEPVRVQGLSG-VAAVSAGLNHSLARGTDGGVWAWGGNSFGQLGEGTTSN 488
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++P+ +V LSG+ T A GF S+A G + +WG +G+LG G S+
Sbjct: 489 ALVPV--RVRGLSGVETISA--GFNHSLARASDGGLWAWGGNYTGQLGDGTTSN------ 538
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P ++ L GV A G HS + +G V+
Sbjct: 539 ---SSVPVRVQGLSGVAAVFA--GLNHSLAVRTDGSVW---------------------- 571
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 341
WG N G LG G+ + +P RVQG S ++ V+ G H+ ++ S+G +
Sbjct: 572 --------AWGINSFGQLGEGTTNTSFAPVRVQG---LSGMETVAAGSLHSLSVGSDGSM 620
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHG 367
W WG +H H GQLGHG
Sbjct: 621 --WSWGNNH-------H---GQLGHG 634
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 147/331 (44%), Gaps = 57/331 (17%)
Query: 43 WGNGDYGRLGLGS-------LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
WG+ D+G+ G GS + RW V A+A G AH+L + G ++A
Sbjct: 273 WGSNDHGQRGDGSTVYLSSSVRVRWLSGVV---------AMAAGSAHSLAVRSDGTLWAW 323
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G N +GQLG + P R+ GL + VV ++ G HS A+ DG ++ WG N +GQL
Sbjct: 324 GANYYGQLGDGTRKDHD-TPKRVQGLSR-VVAVAAGDGHSIALCADGTVWTWGYNHDGQL 381
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G P+P V LSG+ A G S+AV G V +WG G+LG G
Sbjct: 382 AHGSTNDS--PVPLHVRELSGVVA--VAAGALHSLAVLSDGSVWAWGYNRQGQLGDGS-- 435
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
L S++E P ++ L GV +AG HS +G V+ +G + ++
Sbjct: 436 -----LSSSAE--PVRVQGLSGVAA--VSAGLNHSLARGTDGGVWAWGGNSFGQLGEGTT 486
Query: 276 NHARRPSLISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQ 315
++A P + G G L+ WG N G LG G+ P RVQ
Sbjct: 487 SNALVPVRVRGLSGVETISAGFNHSLARASDGGLWAWGGNYTGQLGDGTTSNSSVPVRVQ 546
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWG 345
G S V V G H+ A+ ++G + WG
Sbjct: 547 G---LSGVAAVFAGLNHSLAVRTDGSVWAWG 574
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 137/293 (46%), Gaps = 42/293 (14%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+A G H+L L G V+A G N GQLG + +S EP+R+ GL VV +S G HS
Sbjct: 1 MAAGTDHSLALRHDGTVWAWGGNALGQLGDGSSDSHS-EPVRVRGLSG-VVAVSAGEGHS 58
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ DG ++ WG N+ GQLG G + P+ +V LSG+ A G S+A+
Sbjct: 59 LALHRDGTVWAWGDNALGQLGDGTSDSHSEPV--RVPGLSGVVAVSA--GDNHSLALRSD 114
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG S +LG G + S P +++L +V AAG HS +
Sbjct: 115 GSVWAWGDNNSDQLG--------GAPGAQSYSVPWRLEDLS--EVVAVAAGGNHSLAVRA 164
Query: 256 NGRVYIFGD---------------------RAVDKMLFQEGNHARRPSLISGGELYTWGS 294
+G V+ +GD + + ++ A +S G ++ WG+
Sbjct: 165 DGTVWAWGDNFAGQLGDGNILTTRWLPKQVQGLSGVVAASAGWAHSMVALSDGSVWAWGN 224
Query: 295 NENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 345
N +G LG G S+ PE+VQG V V+ G ++ A+ S+G + WG
Sbjct: 225 NTSGQLGNGISVGYGALPEQVQGLRG---VMAVAAGGLYSLALRSDGTLWAWG 274
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ + PV + A+ G H+L + G V+A G+N FGQ
Sbjct: 523 WGGNYTGQLGDGTTSNSSVPVRVQGLSG--VAAVFAGLNHSLAVRTDGSVWAWGINSFGQ 580
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+R+ GL + ++ G HS ++ DG ++ WG N +GQLG G
Sbjct: 581 LG-EGTTNTSFAPVRVQGLSG-METVAAGSLHSLSVGSDGSMWSWGNNHHGQLGHGLPGR 638
Query: 163 KVIPI 167
P+
Sbjct: 639 SPTPV 643
>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
vitripennis]
Length = 4752
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 141/323 (43%), Gaps = 38/323 (11%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG G ++S P + + + +K +A GG H L L+ G VY+ G D G
Sbjct: 3952 GYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4011
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG I Y L + L E+V I+ G HHS+AI+ G LY WGK G+LG G
Sbjct: 4012 KLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGDSD 4071
Query: 162 AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ PT V L G A G Q++ VT V SWG G G+LG G
Sbjct: 4072 DQL--KPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4123
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P I+ L G+ V G S + +G VY +G ++ +H R
Sbjct: 4124 ---SDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVR 4180
Query: 280 RPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
RP +S GE+YTWG N+ G LG G+ SP V
Sbjct: 4181 RPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWGDNDEGQLGDGTTHAQQSPRLVHA- 4239
Query: 318 FSESPVDQVSCGWKHTAAISEGK 340
+ +V+CG HT A S K
Sbjct: 4240 LQGKNITRVACGSAHTLAWSTTK 4262
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 144/319 (45%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT+ G V++ G + G
Sbjct: 2980 GEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 3039
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I LK K + I+ G HS+AI +GELY WG G+LG G
Sbjct: 3040 KLGHGNRVSLD-KPRLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDT 3098
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P V+ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3099 TTHL--KPKLVDALVGQRVIQVACGSRDAQTMALTEDGSVYSWGDGDFGKLGRGG----- 3151
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S Y+P + L G+ V G S + + G V+ +G ++ +H
Sbjct: 3152 ----SDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3207
Query: 279 RRPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQG 316
RRP+L+ G G++Y WG N++G G GS V P V
Sbjct: 3208 RRPTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGSTMVNRKPSLVHN 3267
Query: 317 PFSESPVDQVSCGWKHTAA 335
++ V++V+CG H+ A
Sbjct: 3268 -LEDAKVNRVACGSSHSIA 3285
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 159/356 (44%), Gaps = 77/356 (21%)
Query: 86 LTETGCVYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+ + VY GLND QLG + + L+P+ I+G K + +S
Sbjct: 2918 VQQNAAVYVWGLNDKDQLGGLKGSKIKLPVHSEVLSKLKPIHIAGGSKTLFVVSQ----- 2972
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVT 193
+G+LY G+ +NG+LGLG P P + LS K+ A+ G + ++A+T
Sbjct: 2973 -----EGKLYACGEGTNGRLGLGDNNNVGEPKP--IPFLSQYIIKKVAVHSGGKHALALT 3025
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
GKV SWG G G+LGHG S+ PRLI+ L+ +++ A G HSA I
Sbjct: 3026 QDGKVFSWGEGEDGKLGHGNRVSL---------DKPRLIEALKSKRIRDIACGSGHSAAI 3076
Query: 254 DENGRVYIFG-----------------DRAVDKMLFQE-------GNHARRPSLISGGEL 289
NG +Y +G + VD ++ Q A+ +L G +
Sbjct: 3077 ASNGELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTEDGSV 3136
Query: 290 YTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 345
Y+WG + G LG G D +SP +R+ G V QV CG + + A+++ G++ TWG
Sbjct: 3137 YSWGDGDFGKLGRGGSDGCYSPLPVDRLNG----LGVVQVECGAQFSLALTKYGEVWTWG 3192
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G +LGHGND PT+V K + V+ G H A+ +
Sbjct: 3193 KGDYF------------RLGHGNDHHVRRPTLVEGLRGKKVVHVAVGALHCLAVTD 3236
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 190/399 (47%), Gaps = 60/399 (15%)
Query: 32 SSTLQRRFAA-LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-T 87
+S +Q+ A +WG D +LG G S+ + PV K LK + GG+ TLF+ +
Sbjct: 2915 ASDVQQNAAVYVWGLNDKDQLG-GLKGSKIKLPVHSEVLSK--LKPIHIAGGSKTLFVVS 2971
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGEL 144
+ G +YA G G+LG+ +N EP I L + +++ + +G H+ A+T DG++
Sbjct: 2972 QEGKLYACGEGTNGRLGLGDNNNVG-EPKPIPFLSQYIIKKVAVHSGGKHALALTQDGKV 3030
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ WG+ +G+LG G + + + P +E L + A G S A+ G++ +WG G
Sbjct: 3031 FSWGEGEDGKLGHGNRVS--LDKPRLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLG 3088
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIF 262
GRLGHG +T+ P+L+ L G +V A G + + E+G VY +
Sbjct: 3089 EYGRLGHGD---------TTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTEDGSVYSW 3139
Query: 263 GDRAVDKMLF--QEGNHARRP--------------------SLISGGELYTWGSNENGCL 300
GD K+ +G ++ P +L GE++TWG + L
Sbjct: 3140 GDGDFGKLGRGGSDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRL 3199
Query: 301 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHS 359
G G+ + P V+G V V+ G H A+++ G++ WG ++ H
Sbjct: 3200 GHGNDHHVRRPTLVEG-LRGKKVVHVAVGALHCLAVTDAGQVYAWG---------DNDH- 3248
Query: 360 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
GQ G+G+ + P++V+ E+ K +V+CG +H+ A
Sbjct: 3249 --GQQGNGSTMVNRKPSLVHNLEDAKVNRVACGSSHSIA 3285
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 164/386 (42%), Gaps = 57/386 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P+ C + LA GG TLF +T G VYATG G
Sbjct: 3899 WGHNHRGQLGGLEGAKVKLPLPCESLSALRPIQLA-GGEQTLFAVTADGKVYATGYGALG 3957
Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LG S + LE ++ +KK V +++G H A++ +G +Y WG+ +G+LG
Sbjct: 3958 RLGTGGVDSVMVPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4015
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P +E L G A G S A++ G + +WG G GRLGHG
Sbjct: 4016 GNRI--TYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGD---- 4069
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P ++ L+G KV A +G + C+ ++ V+ +GD K+
Sbjct: 4070 -----SDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4124
Query: 276 NHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + P +L G +YTWG + LG G+ D + P +
Sbjct: 4125 DGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRK 4184
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V + ++ G H A S+ G++ TW G + GQLG G
Sbjct: 4185 VSA-LQGKKIVSIATGSLHCVACSDKGEVYTW------------GDNDEGQLGDGTTHAQ 4231
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGA 398
P +V+ + +V+CG HT A
Sbjct: 4232 QSPRLVHALQGKNITRVACGSAHTLA 4257
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 143/342 (41%), Gaps = 60/342 (17%)
Query: 32 SSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
+ T Q A WGN +G GS+ P C A + +K L C L L+ +G
Sbjct: 429 TQTFQEVLA--WGNVHFGS---GSM-----PFYCDAIAEIGVKQLCCTERALLILSLSGK 478
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH--HSSAITVDGELYMWGK 149
VY Q P + G +VVQI++ H A+T G +Y WG
Sbjct: 479 VYMMYYGSETQY-----------PQSVYGFADDVVQIASHPDGKHYLALTTKGIVYSWGN 527
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
G+LG G + P +E LS A G S A++ G++L+WG G GRL
Sbjct: 528 GDGGRLGHGDSFS--CDEPQVIEVLSDRTVTYIACGSTYSAAISSTGELLTWGRGSYGRL 585
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGD--- 264
GHG I P ++ L G V A +G + C+ +G V+ +GD
Sbjct: 586 GHGICDDI---------SIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDGDY 636
Query: 265 --------------RAVDKMLFQEGNHA-----RRPSLISGGELYTWGSNENGCLGIGSI 305
+ VDK+L Q +L + GE+YTWG ++ LG G+
Sbjct: 637 GKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYRLGHGNE 696
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 347
+ + P+ V+G V +S G H AI+E + L +GWG
Sbjct: 697 EHVRFPKLVEG-LRNKKVRDLSVGNLHILAITEDQ-LVYGWG 736
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 149/338 (44%), Gaps = 53/338 (15%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
+G +Y G N GQLG E L PL L +Q++ G A+T DG++Y
Sbjct: 3893 SGAIYGWGHNHRGQLGGLEGAKVKL-PLPCESLSALRPIQLAGGEQTLFAVTADGKVYAT 3951
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGG 205
G + G+LG G + +PT +E + +F K+ A+ G + +A++ G V SWG G
Sbjct: 3952 GYGALGRLGTG--GVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGD 4009
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LGHG R T + P+LI+ L G ++ A G HSA I G +Y +G
Sbjct: 4010 DGKLGHGN--------RITYDR-PKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKG 4060
Query: 266 AVDKMLFQEGNHARRPSLISG------------------------GELYTWGSNENGCLG 301
++ + + +P++++ +++WG + G LG
Sbjct: 4061 RYGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLG 4120
Query: 302 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSS 360
G D P +++ + V +V CG + + A++ G + TWG G H
Sbjct: 4121 RGGSDGCKVPMKIES-LAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYH---------- 4169
Query: 361 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+LGHG D P V+ + K + ++ G H A
Sbjct: 4170 --RLGHGTDDHVRRPRKVSALQGKKIVSIATGSLHCVA 4205
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 125/281 (44%), Gaps = 55/281 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
EVVQ +S + + +Y+WG N QLG G K +K I +P E LS + A
Sbjct: 2904 EVVQEQMTAQRASDVQQNAAVYVWGLNDKDQLG-GLKGSK-IKLPVHSEVLSKLKPIHIA 2961
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + V+ GK+ + G G +GRLG G +++ P+ I L +K
Sbjct: 2962 GGSKTLFVVSQEGKLYACGEGTNGRLGLGDNNNV---------GEPKPIPFLSQYIIKKV 3012
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
A +HS G HA +L G++++WG E+G LG G
Sbjct: 3013 A---VHSG-----------------------GKHAL--ALTQDGKVFSWGEGEDGKLGHG 3044
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGG 362
+ L P ++ S+ + ++CG H+AAI S G++ TWG G G
Sbjct: 3045 NRVSLDKPRLIEALKSKR-IRDIACGSGHSAAIASNGELYTWGLG------------EYG 3091
Query: 363 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFN--HTGALLE 401
+LGHG+ ++ P +V+ + +QV+CG T AL E
Sbjct: 3092 RLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTE 3132
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + ++ + CGG + LT G VY G D +
Sbjct: 631 WGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYR 690
Query: 103 LG--ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG E++ + P + GL+ K+V +S G H AIT D +Y WG+N Q+
Sbjct: 691 LGHGNEEHVRF---PKLVEGLRNKKVRDLSVGNLHILAITEDQLVYGWGRNDACQIDPSL 747
Query: 160 KAAKVIPIPTKVECLSG 176
A V+ PT LSG
Sbjct: 748 GA--VVSEPTLCPTLSG 762
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 100/237 (42%), Gaps = 47/237 (19%)
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A+T G V SWG G GRLGHG S S P++I+ L V A G +
Sbjct: 514 LALTTKGIVYSWGNGDGGRLGHGD---------SFSCDEPQVIEVLSDRTVTYIACGSTY 564
Query: 250 SACIDENGRVYIFG-------------DRAVDKMLFQEGNH-----------ARRPSLIS 285
SA I G + +G D ++ ++ H ++ + +
Sbjct: 565 SAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTN 624
Query: 286 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTW 344
G +++WG + G LG G D P+ V ++ V +V CG + +AA++ G++ TW
Sbjct: 625 SGIVFSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVV-KVFCGGQFSAALTAHGEVYTW 683
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G G + +LGHGN+ P +V N K +S G H A+ E
Sbjct: 684 GKGDHY------------RLGHGNEEHVRFPKLVEGLRNKKVRDLSVGNLHILAITE 728
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Query: 27 CKRWISSTLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF 85
C S L R A WG GDY RLG G+ + RP SA + + ++A G H +
Sbjct: 4146 CGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVSALQGKKIVSIATGSLHCVA 4205
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
++ G VY G ND GQLG P + L+ K + +++ G H+ A
Sbjct: 4206 CSDKGEVYTWGDNDEGQLGDGTTHAQQ-SPRLVHALQGKNITRVACGSAHTLA 4257
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
WG+ D G+LG G+ ++ P + A + ++ +ACG AHTL + T ++
Sbjct: 4215 WGDNDEGQLGDGTTHAQQSPRLVHALQGKNITRVACGSAHTLAWSTTKATHS 4266
>gi|356497843|ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 388
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 174/385 (45%), Gaps = 50/385 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG L+ P + S+ +LACGGAH + LT G V + G + GQ
Sbjct: 23 WGAGTEGQLGTKILQDEHFPQLLHQPSLSSISSLACGGAHVIALTSAGKVLSWGRGNSGQ 82
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + SL P ++ L + +S G+ HS ++ +G ++ G S GQLG G A
Sbjct: 83 LGHGLVVSNSLYPKAVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCGDGSFGQLGHGDHA 142
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ KV C +Q A G S+ + G +V +G+G G+LG +
Sbjct: 143 SHCSPV--KVSCFVDQHVEQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSND------- 193
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------DRAVDKMLFQE 274
R S P+++ EGV++ AA HSA + +G VY +G D V + L
Sbjct: 194 RVKSVNVPKVVSGFEGVEIAGIAANGDHSAAVSVDGHVYTWGRGFKGFEDARVPQCLNSS 253
Query: 275 GNHARRP-------SLISGGELYTWGSNENGCLG-IGSID-VLHSP-------ERVQGPF 318
N + ++ GE+ G N G L + +I H P E+V G
Sbjct: 254 LNFTKVALGWNHALAMSGEGEVCMLGGNHLGVLSDLQNISPAKHLPHLREVNLEKVPG-L 312
Query: 319 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 377
+ + ++ G +H+ ++E G+I TWGWG GQLG G+ D I P
Sbjct: 313 DGTKITDIATGAEHSVIVTEHGEIKTWGWG------------EHGQLGLGDTRDRISPVT 360
Query: 378 VNFGENVK---ALQVSCGFNHTGAL 399
V+ G ++ ++ V CG T A+
Sbjct: 361 VSLGYDLNEAASVIVFCGSGFTFAV 385
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 62/155 (40%), Gaps = 43/155 (27%)
Query: 289 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 347
+++WG+ G LG + H P+ + P S S + ++CG H A+ S GK+L+WG G
Sbjct: 20 VWSWGAGTEGQLGTKILQDEHFPQLLHQP-SLSSISSLACGGAHVIALTSAGKVLSWGRG 78
Query: 348 GS----------------------------------HGTFSED-------GHSSGGQLGH 366
S H F D G S GQLGH
Sbjct: 79 NSGQLGHGLVVSNSLYPKAVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCGDGSFGQLGH 138
Query: 367 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G+ + P V+ + QV+CG H+ LL+
Sbjct: 139 GDHASHCSPVKVSCFVDQHVEQVACGMRHSLVLLK 173
>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
Length = 4853
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 140/323 (43%), Gaps = 38/323 (11%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G +S P + + + +K A++ GG H + L+ G VY+ G D G
Sbjct: 4052 GYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDG 4111
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + Y L L E+V I+ G HHS+AIT G LY WGK G+LG G
Sbjct: 4112 KLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSD 4171
Query: 162 AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P VE L A G Q++ VT V SWG G G+LG G
Sbjct: 4172 DQL--RPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4223
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P I L G+ V G S + +G VY +G ++ +H R
Sbjct: 4224 ---SDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVR 4280
Query: 280 RPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
RP ++ GE++TWG N+ G LG G+ LH P V
Sbjct: 4281 RPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHA- 4339
Query: 318 FSESPVDQVSCGWKHTAAISEGK 340
+ +V+CG HT A S K
Sbjct: 4340 LQGKKITRVACGSAHTLAWSTAK 4362
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 143/319 (44%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P + +K +A GG H L LT+ G V++ G + G
Sbjct: 3070 GEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 3129
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG I +P I LK K + I+ G HS+AI +GELY WG G+LG G
Sbjct: 3130 KLGHGNCISLD-KPKLIEVLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDT 3188
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P V+ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3189 ITQTRP--KLVQALIGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLGRGG----- 3241
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S YTP L+ L + V G S + + G V+ +G ++ +H
Sbjct: 3242 ----SDGCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3297
Query: 279 RRPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R+P+L+ G G++Y WG N++G G G+ V P V
Sbjct: 3298 RKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHD 3357
Query: 317 PFSESPVDQVSCGWKHTAA 335
++ V++VSCG H+ A
Sbjct: 3358 -LEDARVNRVSCGSSHSIA 3375
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 168/386 (43%), Gaps = 57/386 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P C + LA GG TLF +T G +Y+TG G
Sbjct: 3999 WGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLA-GGEQTLFAVTADGKIYSTGYGAAG 4057
Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S I LE ++ +KK V +S+G H A++ +G +Y WG+ +G+LG
Sbjct: 4058 RLGIGGTDSVMIPTLLESIQHVFIKK--VAVSSGGKHCIALSSEGHVYSWGEGDDGKLGH 4115
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G K + P +E L G+ A G S A+T G + +WG G GRLGHG
Sbjct: 4116 GNKVS--YDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 4169
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P++++ L+ KV A +G + C+ ++ V+ +GD K+
Sbjct: 4170 -----SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4224
Query: 276 NHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + P +L G +YTWG + LG G+ D + P +
Sbjct: 4225 DGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRK 4284
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V + ++ G H A S+ G++ TW G + GQLG G
Sbjct: 4285 VAA-LQGKKIISIATGSLHCVACSDKGEVFTW------------GDNDEGQLGDGTTSAL 4331
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGA 398
P +V+ + K +V+CG HT A
Sbjct: 4332 HRPRLVHALQGKKITRVACGSAHTLA 4357
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 181/396 (45%), Gaps = 63/396 (15%)
Query: 13 YLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKH 71
+L D ++ K +R + + Q+ +WG D +LG G S+ + PV K
Sbjct: 2987 FLASDWEVLQKQIAIQRSVDTPPQQSAVYVWGLNDKDQLG-GLKGSKIKLPVYSETLSK- 3044
Query: 72 SLKAL-ACGGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-- 127
LK + GG+ TLF+ ++ G +YA G G+LG+ ++ EP I L + V++
Sbjct: 3045 -LKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDD-NNMCEPKAIPFLSQFVIKKV 3102
Query: 128 -ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
+ +G H+ A+T DG+++ WG+ +G+LG G + + P +E L + A G
Sbjct: 3103 AVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCIS--LDKPKLIEVLKSKRIRDIACGS 3160
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S A+ G++ +WG G GRLGHG + ++ P+L++ L G +V
Sbjct: 3161 GHSAAIASNGELYTWGLGEYGRLGHGD---------TITQTRPKLVQALIGHRV------ 3205
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSID 306
+ AC G R M +L + G +Y+WG + G LG G D
Sbjct: 3206 -VQVAC----------GSRDAQTM-----------ALTTDGYVYSWGDGDFGKLGRGGSD 3243
Query: 307 VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 365
++P V + V QV CG + + A+++ G++ TWG G +LG
Sbjct: 3244 GCYTPLLVDR-LNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYF------------RLG 3290
Query: 366 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
HGND PT+V K + V+ G H A+ +
Sbjct: 3291 HGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTD 3326
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 148/342 (43%), Gaps = 56/342 (16%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
T +Y +LG K C +R L NG+ + GS E+++ P F
Sbjct: 514 TPFYCDAIAELGIKQLCCT-------ERALMILSLNGNVYNMYHGS-ETQY-PQRVHGFS 564
Query: 70 KHSLKALA--CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
+ +A G H L LT+ GCVY+ G D G+LG + I Y L + L+K ++
Sbjct: 565 DKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLEKNIIF 624
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF- 186
I+ G +S+A++ +GELY WG+ + G+LG G + PT V L G A G
Sbjct: 625 IACGSTYSAALSANGELYTWGRGNYGRLGHGN--FDDVMTPTLVTTLKGHTVVHVACGSG 682
Query: 187 -EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
Q++ VT G V SWG G G+LG G + TP+++ +L + V
Sbjct: 683 DSQTLCVTASGIVFSWGDGDYGKLGRGG---------TDGSKTPKIVDKLLDINVVKVFC 733
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSI 305
G SA + +G V YTWG + LG GS
Sbjct: 734 GSQFSAALTAHGEV------------------------------YTWGKGDAYRLGHGSE 763
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 347
+ + P+ ++ + V +S G H A++E + + +GWG
Sbjct: 764 EHVRYPKVIES-LRDRKVKDLSVGTTHILALTEDQFV-YGWG 803
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 141/331 (42%), Gaps = 81/331 (24%)
Query: 88 ETGCVYATGLNDFGQLG-----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSS 136
+ VY GLND QLG SE + L+P+ I+G K + +S
Sbjct: 3010 QQSAVYVWGLNDKDQLGGLKGSKIKLPVYSETLS-KLKPIHIAGGSKTLFIVSQ------ 3062
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTG 194
+G+LY G+ +NG+LGLG + P + LS K+ A+ G + ++A+T
Sbjct: 3063 ----EGKLYACGEGTNGRLGLGDDNN--MCEPKAIPFLSQFVIKKVAVHSGGKHALALTQ 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
GKV SWG G G+LGHG S+ P+LI+ L+ +++ A G HSA I
Sbjct: 3117 DGKVFSWGEGEDGKLGHGNCISL---------DKPKLIEVLKSKRIRDIACGSGHSAAIA 3167
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
NG ELYTWG E G LG G P+ V
Sbjct: 3168 SNG------------------------------ELYTWGLGEYGRLGHGDTITQTRPKLV 3197
Query: 315 QGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
Q V QV+CG + A ++G + +WG G F G+LG G
Sbjct: 3198 QALIGHRVV-QVACGSRDAQTMALTTDGYVYSWG----DGDF--------GKLGRGGSDG 3244
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGALLEY 402
P +V+ N+ +QV CG + AL +Y
Sbjct: 3245 CYTPLLVDRLNNLGVIQVECGAQFSLALTKY 3275
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 149/339 (43%), Gaps = 55/339 (16%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLE-PLR-ISGLKKEVVQISTGYHHSSAITVDGELYM 146
+G +Y G N GQLG E L P +S L+ +Q++ G A+T DG++Y
Sbjct: 3993 SGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRP--IQLAGGEQTLFAVTADGKIYS 4050
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAG 204
G + G+LG+G + IPT +E + +F K+ A+ G + +A++ G V SWG G
Sbjct: 4051 TGYGAAGRLGIG--GTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEG 4108
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LGHG + S P+LI++L GV++ A G HSA I G +Y +G
Sbjct: 4109 DDGKLGHGNK---------VSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGK 4159
Query: 265 RAVDKMLFQEGNHARRPSLISGGELY------------------------TWGSNENGCL 300
++ + + RP ++ + Y +WG + G L
Sbjct: 4160 GRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKL 4219
Query: 301 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHS 359
G G D P ++ + V +V CG + + A++ G + TWG G H
Sbjct: 4220 GRGGSDGCKVPLKIDS-LAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYH--------- 4269
Query: 360 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+LGHG D P V + K + ++ G H A
Sbjct: 4270 ---RLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA 4305
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG G+ + P + + + H++ +ACG + TL +T +G V++ G D+
Sbjct: 644 WGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDY 703
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG G + L VV++ G S+A+T GE+Y WGK +LG G +
Sbjct: 704 GKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDAYRLGHGSE 763
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ + P +E L K ++G +A+T V W GR +GQ LG
Sbjct: 764 --EHVRYPKVIESLRDRKVKDLSVGTTHILALTEDQFVYGW-----GRNDYGQIDPTLGP 816
Query: 221 LRSTSEYTPRL 231
+ S P L
Sbjct: 817 IISEPTLCPTL 827
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 140/347 (40%), Gaps = 73/347 (21%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE---PLRI 118
P C A + +K L C + L+ G VY N+ + E P R+
Sbjct: 515 PFYCDAIAELGIKQLCCTERALMILSLNGNVY--------------NMYHGSETQYPQRV 560
Query: 119 SGLKKEVVQISTGY---HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
G + + + + H A+T DG +Y WG G+LG G + P +E L
Sbjct: 561 HGFSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTIS--YDEPKLIEALL 618
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
A G S A++ G++ +WG G GRLGHG ++ TP L+ L
Sbjct: 619 EKNIIFIACGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVM---------TPTLVTTL 669
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSN 295
+G V +H AC + + + + G +++WG
Sbjct: 670 KGHTV-------VHVACGSGDSQTL---------------------CVTASGIVFSWGDG 701
Query: 296 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 354
+ G LG G D +P+ V + V +V CG + +AA++ G++ TWG G ++
Sbjct: 702 DYGKLGRGGTDGSKTPKIVDKLLDINVV-KVFCGSQFSAALTAHGEVYTWGKGDAY---- 756
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHG++ +P ++ + K +S G H AL E
Sbjct: 757 --------RLGHGSEEHVRYPKVIESLRDRKVKDLSVGTTHILALTE 795
>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 277
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 150/312 (48%), Gaps = 59/312 (18%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGK 149
V++ G + GQLGI + EP + L+ + ++ G +H++A+ +G+LY WG
Sbjct: 1 VFSWGRGEDGQLGIGDTSDQD-EPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGG 59
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
G+LG G ++ P +VE L G+ A G + VT G + +WG +G
Sbjct: 60 GMYGKLGHGNESGH--STPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVA 117
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVD 268
GHG +YTP+L++ L G K V+++A GF H+AC+ ++
Sbjct: 118 GHGDTEG--------HQYTPKLLERLNGKKVVQLSACGF-HTACLTDD------------ 156
Query: 269 KMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 328
E + WG + G LG G+ HSP ++ + P QV+C
Sbjct: 157 ------------------HETFAWGEGKFGRLGNGTERNCHSPRLIESLIGKYPC-QVAC 197
Query: 329 GWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 387
G H+A I+ +GK+ T+G GG H GQLGH + V+ + PT+V + V
Sbjct: 198 GGFHSAVITRDGKMYTFG-GGEH-----------GQLGHADKVNKLKPTLVEALDGVVVK 245
Query: 388 QVSCGFNHTGAL 399
Q++CG++H+ AL
Sbjct: 246 QITCGWSHSVAL 257
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 106/220 (48%), Gaps = 12/220 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG+LG G+ P A S+ +ACG HT +T GC+Y G + G
Sbjct: 57 WGGGMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGV 116
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G + G+ P + L K+VVQ+S H++ +T D E + WG+ G+LG G +
Sbjct: 117 AGHGDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTDDHETFAWGEGKFGRLGNGTE- 175
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P +E L G + Q A G S +T GK+ ++G G G+LGH + + L
Sbjct: 176 -RNCHSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKL--- 231
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
P L++ L+GV VK G+ HS + G ++
Sbjct: 232 ------KPTLVEALDGVVVKQITCGWSHSVALTSEGEYHL 265
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 131/302 (43%), Gaps = 47/302 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL-KALACGGAHTLFLTETGCVYATGLNDFG 101
WG G+ G+LG+G + P A + + CG HT + G +Y G +G
Sbjct: 4 WGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGGMYG 63
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG G+S P R+ L +V I+ G H++ +T G LY WG NG G G
Sbjct: 64 KLGHGNESGHS-TPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVAGHGDT 122
Query: 161 AAKVIPIPTKVECLSGIFTKQ-AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P +E L+G Q +A GF + +T + +WG G GRLG+G E +
Sbjct: 123 EGHQY-TPKLLERLNGKKVVQLSACGF-HTACLTDDHETFAWGEGKFGRLGNGTERNC-- 178
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
++PRLI+ L G A G HSA I +G++Y FG ++ + +
Sbjct: 179 -------HSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKL 231
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SE 338
+P+L+ E + G V Q++CGW H+ A+ SE
Sbjct: 232 KPTLV---------------------------EALDGVV----VKQITCGWSHSVALTSE 260
Query: 339 GK 340
G+
Sbjct: 261 GE 262
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 82/208 (39%), Gaps = 57/208 (27%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDEN 256
V SWG G G+LG G S + P + L GV + G H+A + N
Sbjct: 1 VFSWGRGEDGQLGIGDTSD---------QDEPTYVDALRGVGIITHVTCGSYHTAAVASN 51
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
G +LYTWG G LG G+ +P RV+
Sbjct: 52 G------------------------------DLYTWGGGMYGKLGHGNESGHSTPRRVEA 81
Query: 317 PFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH- 374
S VD ++CG +HTA + S+G + TW G G GHG+ + +
Sbjct: 82 LVGLSIVD-IACGSRHTAVVTSKGCLYTW------------GDKENGVAGHGDTEGHQYT 128
Query: 375 PTIVNFGENVKALQVS-CGFNHTGALLE 401
P ++ K +Q+S CGF HT L +
Sbjct: 129 PKLLERLNGKKVVQLSACGF-HTACLTD 155
>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 1859
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/385 (29%), Positives = 172/385 (44%), Gaps = 54/385 (14%)
Query: 43 WGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ +LG G +S+ P F + +++CG ++ LTE G VY G
Sbjct: 593 WGSSSNCKLGFKTEGREQSQATPERLPNFNIPEICSISCGSYYSAALTENGDVYMWGRGS 652
Query: 100 FGQLGISENIGYSLE----PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
+S SLE P ++ L EVV +S GY+HS+A+ +GEL WG +GQL
Sbjct: 653 VKNPPLSTLGNGSLEDQLLPTKVESLS-EVVLVSIGYYHSAALKSNGELLTWGCGEDGQL 711
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + IP V+ ++ + Q G + ++ +T GKV +WG G+LG G
Sbjct: 712 GHGDVLNQT--IPKVVQTMTSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGD-- 767
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA--------- 266
+ TP L+ LE + A G H A + V +FG+ A
Sbjct: 768 -------TQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNAREVLVFGNGAAMGSANIIS 820
Query: 267 VDKML--FQEGN-------HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
V M+ + N H +L G++YTWGS + LG G+ P+ V G
Sbjct: 821 VPMMVPALKHLNIERLSCGHYSTAALTECGDVYTWGSGQE--LGHGTNQSELHPKLVDGL 878
Query: 318 FSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 376
S+S + Q+SCG +H A +++ GKI T G F + GH+ G Q +D + T
Sbjct: 879 RSQS-IRQISCGGRHMAFLTDSGKIYTCG----KDPFGQLGHAQGDQ-NKPKKIDSLLKT 932
Query: 377 IVNFGENVKALQVSCGFNHTGALLE 401
+ VSCG NH +L +
Sbjct: 933 TF--------ISVSCGENHNASLFD 949
>gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1100
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 166/374 (44%), Gaps = 72/374 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + + +++ +ACG HT +T +G +Y G +F
Sbjct: 328 WGEESGGRLGHGVDSDVLHPKLIDSLSNINIELVACGEYHTCAVTLSGDLYTWGDGTYNF 387
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G + G LG G
Sbjct: 388 GLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHG 446
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ K + IP +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 447 DR--KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 504
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L F AC
Sbjct: 505 GRLGHGDKEAKL---------VPTCVAAL-------VEPNFCQVAC-------------- 534
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
H+ +L + G +YT GS G LG D P RV+G S+S V+++
Sbjct: 535 ---------GHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGRLSKSFVEEI 584
Query: 327 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 385
+CG H A + S+ ++ TWG G + G+LGHG+ D P++V ++ +
Sbjct: 585 ACGAYHVAVLTSKTEVYTWGKGAN------------GRLGHGDTDDRNFPSLVEALKDKQ 632
Query: 386 ALQVSCGFNHTGAL 399
++CG N T A+
Sbjct: 633 VKSIACGTNFTAAI 646
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 122/284 (42%), Gaps = 65/284 (22%)
Query: 131 GYHHSSAITVDGELYMWGKNSNGQL----------GLGKKAAKVIPIPTKVECLSGIFTK 180
G+ S A+ G++++WG+ + + G G K ++P +E + +
Sbjct: 253 GHDDSDAL---GDVFIWGEGTGDGVLGGGAHRAGSGFGVKLDSLLP--KALESTVVLDVQ 307
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
A G + VT G+V SWG GRLGHG +S +L P+LI L + +
Sbjct: 308 NIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVL---------HPKLIDSLSNINI 358
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCL 300
++ A G H+ + +G +Y +GD + L GN E+ W
Sbjct: 359 ELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN-----------EVSHW-------- 399
Query: 301 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHS 359
P+RV GP V +SCG HTA + S G++ T+G GTF
Sbjct: 400 ---------VPKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFG----DGTF------ 440
Query: 360 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
G LGHG+ P V + ++ ++ +CG HT A++E +
Sbjct: 441 --GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 482
>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
Length = 4802
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 140/323 (43%), Gaps = 38/323 (11%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G +S P + + + +K A++ GG H L L+ G VY+ G D G
Sbjct: 4001 GYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEGDDG 4060
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + Y L L E++ I+ G HHS+AIT G LY WGK G+LG G
Sbjct: 4061 KLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSD 4120
Query: 162 AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P VE L A G Q++ VT V SWG G G+LG G
Sbjct: 4121 DQL--RPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P I L G+ V G S + +G VY +G ++ +H R
Sbjct: 4173 ---SDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVR 4229
Query: 280 RPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
RP ++ GE++TWG N+ G LG G+ LH P V
Sbjct: 4230 RPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHA- 4288
Query: 318 FSESPVDQVSCGWKHTAAISEGK 340
+ +V+CG HT A S K
Sbjct: 4289 LQGKKITRVACGSAHTLAWSTAK 4311
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 146/319 (45%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P + +K +A GG H L LT+ G V++ G + G
Sbjct: 3019 GEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 3078
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N+ +P I LK K + I+ G HS+AI +GELY WG G+LG G
Sbjct: 3079 KLGHGNNMSLD-KPKLIETLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDT 3137
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P V+ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3138 VTQA--RPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGG----- 3190
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S YTP +++ L G+ V G S + + G V+ +G ++ +H
Sbjct: 3191 ----SDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3246
Query: 279 RRPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R+P+L+ G G++Y WG N++G G G+ V P V
Sbjct: 3247 RKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVH- 3305
Query: 317 PFSESPVDQVSCGWKHTAA 335
++ V++VSCG H+ A
Sbjct: 3306 ELEDARVNRVSCGSSHSIA 3324
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 168/386 (43%), Gaps = 57/386 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P C + LA GG TLF +T G VY+TG G
Sbjct: 3948 WGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLA-GGEQTLFAVTADGKVYSTGYGAAG 4006
Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S I LE ++ +KK V +S+G H A++ +G +Y WG+ +G+LG
Sbjct: 4007 RLGIGGTDSVMIPTLLESIQHVFIKK--VAVSSGGKHCLALSSEGHVYSWGEGDDGKLGH 4064
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G K + P +E L G+ A G S A+T G + +WG G GRLGHG
Sbjct: 4065 GNKMS--YDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 4118
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P++++ L+ KV A +G + C+ ++ V+ +GD K+
Sbjct: 4119 -----SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4173
Query: 276 NHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + P +L G +YTWG + LG G+ D + P +
Sbjct: 4174 DGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRK 4233
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V + ++ G H A S+ G++ TW G + GQLG G
Sbjct: 4234 VAA-LQGKKIISIATGSLHCVACSDKGEVFTW------------GDNDEGQLGDGTTSAL 4280
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGA 398
P +V+ + K +V+CG HT A
Sbjct: 4281 HRPRLVHALQGKKITRVACGSAHTLA 4306
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 159/354 (44%), Gaps = 77/354 (21%)
Query: 88 ETGCVYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
+ VY GLND QLG + + L+P+ I+G K + +S
Sbjct: 2959 QESAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFIVSQ------- 3011
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGG 195
+G+LY G+ +NG+LGLG P P + LS K+ A+ G + ++A+T
Sbjct: 3012 ---EGKLYACGEGTNGRLGLGDDNNVCEPKP--IPFLSQFVIKKVAVHSGGKHALALTQD 3066
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV SWG G G+LGHG S+ P+LI+ L+ +++ A G HSA I
Sbjct: 3067 GKVFSWGEGEDGKLGHGNNMSL---------DKPKLIETLKSKRIRDIACGSGHSAAIAS 3117
Query: 256 NGRVYIFG-------------DRAVDKMLFQEGNH-----------ARRPSLISGGELYT 291
NG +Y +G +A K++ H A+ +L + G +Y+
Sbjct: 3118 NGELYTWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYS 3177
Query: 292 WGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 347
WG + G LG G D ++P ER+ G V QV CG + + A+++ G++ TWG G
Sbjct: 3178 WGDGDFGKLGRGGSDGCYTPLVVERLNG----LGVVQVECGAQFSLALTKYGEVWTWGKG 3233
Query: 348 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHGND PT+V K + V+ G H A+ +
Sbjct: 3234 DYF------------RLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTD 3275
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 150/342 (43%), Gaps = 56/342 (16%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
T +Y +LG K C +R L NG+ + GS E+++ P F
Sbjct: 455 TPFYCDAIAELGIKQLCCT-------ERALMILSLNGNVYNMYHGS-ETQY-PQRVHGFS 505
Query: 70 KHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
+ +A G H L LT+ GCVY+ G D G+LG + + Y L + L+K +V
Sbjct: 506 DKLVTMIASHSDGKHHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLEKNIVF 565
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF- 186
I+ G +S+A++V GELY WG+ + G+LG G + IPT V L G A G
Sbjct: 566 IACGSTYSAALSVSGELYTWGRGNYGRLGHGN--FDDVMIPTLVTTLKGHTVVHVACGSG 623
Query: 187 -EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
Q++ VT G V SWG G G+LG G + TP+++ +L + V
Sbjct: 624 DSQTLCVTASGIVFSWGDGDYGKLGRGG---------TDGSKTPKIVDKLLDINVVKVFC 674
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSI 305
G SA +L + GE+YTWG + LG GS
Sbjct: 675 GSQFSA------------------------------ALTAHGEVYTWGKGDTYRLGHGSE 704
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 347
+ + P+ ++ + + +S G H ++E + + +GWG
Sbjct: 705 EHVRYPKIIES-LRDKKIKDLSVGATHILVLTEDQFV-YGWG 744
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 191/418 (45%), Gaps = 60/418 (14%)
Query: 13 YLKQDIKLGSKLGICKRWISSTLQRRFAA-LWGNGDYGRLGLGSLESRWR-PVVCSAFEK 70
+L D ++ + +R I +T + A +WG D +LG G S+ + PV K
Sbjct: 2935 FLASDWEVLQEQVAVQRSIDATPPQESAVYVWGLNDKDQLG-GLKGSKIKLPVYSEVLSK 2993
Query: 71 HSLKAL-ACGGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ- 127
LK + GG+ TLF+ ++ G +YA G G+LG+ ++ EP I L + V++
Sbjct: 2994 --LKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDD-NNVCEPKPIPFLSQFVIKK 3050
Query: 128 --ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
+ +G H+ A+T DG+++ WG+ +G+LG G + + P +E L + A G
Sbjct: 3051 VAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNNMS--LDKPKLIETLKSKRIRDIACG 3108
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
S A+ G++ +WG G GRLGHG + ++ P+L++ L G +V A
Sbjct: 3109 SGHSAAIASNGELYTWGLGEYGRLGHGD---------TVTQARPKLVQTLVGHRVVQVAC 3159
Query: 246 GF--LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP---------------------- 281
G + + +G VY +GD K+ + P
Sbjct: 3160 GSRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLVVERLNGLGVVQVECGAQFSL 3219
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GK 340
+L GE++TWG + LG G+ + P V+G + V+ G H A+++ G+
Sbjct: 3220 ALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEG-LRGKKIVHVAVGALHCLAVTDTGQ 3278
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+ WG ++ H GQ G+G P++V+ E+ + +VSCG +H+ A
Sbjct: 3279 VYAWG---------DNDH---GQQGNGTTSVNRKPSLVHELEDARVNRVSCGSSHSIA 3324
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 151/339 (44%), Gaps = 55/339 (16%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLE-PLR-ISGLKKEVVQISTGYHHSSAITVDGELYM 146
+G +Y G N GQLG E L P +S L+ +Q++ G A+T DG++Y
Sbjct: 3942 SGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRP--IQLAGGEQTLFAVTADGKVYS 3999
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAG 204
G + G+LG+G + IPT +E + +F K+ A+ G + +A++ G V SWG G
Sbjct: 4000 TGYGAAGRLGIG--GTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEG 4057
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LGHG + + + R P+LI++L GV++ A G HSA I G +Y +G
Sbjct: 4058 DDGKLGHGNK---MSYDR------PKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGK 4108
Query: 265 RAVDKMLFQEGNHARRPSLISGGELY------------------------TWGSNENGCL 300
++ + + RP ++ + Y +WG + G L
Sbjct: 4109 GRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKL 4168
Query: 301 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHS 359
G G D P ++ + V +V CG + + A++ G + TWG G H
Sbjct: 4169 GRGGSDGCKVPLKIDS-LAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYH--------- 4218
Query: 360 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+LGHG D P V + K + ++ G H A
Sbjct: 4219 ---RLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA 4254
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 141/348 (40%), Gaps = 75/348 (21%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE---PLRI 118
P C A + +K L C + L+ G VY N+ + E P R+
Sbjct: 456 PFYCDAIAELGIKQLCCTERALMILSLNGNVY--------------NMYHGSETQYPQRV 501
Query: 119 SGLKKEVVQI----STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
G ++V + S G HH A+T DG +Y WG G+LG G + P +E L
Sbjct: 502 HGFSDKLVTMIASHSDGKHHL-ALTQDGCVYSWGNGDGGRLGHGDTVS--YDEPKLIEAL 558
Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
A G S A++ G++ +WG G GRLGHG ++ P L+
Sbjct: 559 LEKNIVFIACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVM---------IPTLVTT 609
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGS 294
L+G V +H AC + + + + G +++WG
Sbjct: 610 LKGHTV-------VHVACGSGDSQTL---------------------CVTASGIVFSWGD 641
Query: 295 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTF 353
+ G LG G D +P+ V + V +V CG + +AA++ G++ TWG G ++
Sbjct: 642 GDYGKLGRGGTDGSKTPKIVDKLLDINVV-KVFCGSQFSAALTAHGEVYTWGKGDTY--- 697
Query: 354 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHG++ +P I+ + K +S G H L E
Sbjct: 698 ---------RLGHGSEEHVRYPKIIESLRDKKIKDLSVGATHILVLTE 736
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 91/191 (47%), Gaps = 9/191 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG G+ + P + + + H++ +ACG + TL +T +G V++ G D+
Sbjct: 585 WGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDY 644
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG G + L VV++ G S+A+T GE+Y WGK +LG G +
Sbjct: 645 GKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSE 704
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ + P +E L K ++G + +T V W GR +GQ LG
Sbjct: 705 --EHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQFVYGW-----GRNDYGQIDPTLGS 757
Query: 221 LRSTSEYTPRL 231
+ S P L
Sbjct: 758 VISEPTLCPTL 768
>gi|145509481|ref|XP_001440679.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407907|emb|CAK73282.1| unnamed protein product [Paramecium tetraurelia]
Length = 401
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 174/372 (46%), Gaps = 60/372 (16%)
Query: 60 WRPVVCSAFEKHSLKALACGGAHTL---FLTETGCVYATGLNDFGQLGISENIG-YSLEP 115
WR AF+ + LK G + T F+ +YA G N+FGQLGI +I YS +
Sbjct: 2 WR----RAFQ-NCLKIAFIGSSVTFTSSFVFSQEQLYAWGWNNFGQLGIGNSISQYSPQL 56
Query: 116 LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
+ I ++V+ ++ S+AI G+LY WG++ G LG G+ + I +P+ V+CL
Sbjct: 57 VPI----QDVLFVACKSSVSAAIDKSGKLYTWGRSKFGLLGNGQ--VENINVPSLVQCLK 110
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL---- 231
+ K A G A+T G++ +WG G+LGH ++S R EY L
Sbjct: 111 HLDFKFVACGNYHMAAITTDGQLYTWGNFDHGKLGHSFDNSAKLPSREKYEYQKNLGSAK 170
Query: 232 IKELE--GVKVKIAAAGFLHSACIDENGRVYIFG----------DRAVDKMLFQEGNHAR 279
+ EL KV+ A G + + E+G VY G + VD+ F++ +
Sbjct: 171 LPELVQLNFKVQQVALGDQFTIILSEDGNVYSVGLNKKGILGYQTKNVDEPTFKQIPDLK 230
Query: 280 R-----------PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 328
+L S G ++ WGSN G LG S V+ +P++++G + Q SC
Sbjct: 231 NIVQIDSGTDFSVALDSDGNMFAWGSNYFGQLGTPSPSVVQTPQQIKG---LPKIKQFSC 287
Query: 329 GWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 387
G + A+S +G + TWG+GG GQLG + D P + F +N+
Sbjct: 288 GEQFIGALSTDGVLYTWGFGGD------------GQLGTPSKQDIPTPHKIQFDQNID-- 333
Query: 388 QVSCGFNHTGAL 399
+VSCG H G +
Sbjct: 334 KVSCGQAHVGIV 345
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 180/400 (45%), Gaps = 76/400 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG ++G+LG+G+ S++ P + + +AC + + + ++G +Y G + FG
Sbjct: 35 WGWNNFGQLGIGNSISQYSPQLVPI---QDVLFVACKSSVSAAIDKSGKLYTWGRSKFGL 91
Query: 103 LG--ISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ENI P + LK + ++ G +H +AIT DG+LY WG +G+LG
Sbjct: 92 LGNGQVENINV---PSLVQCLKHLDFKFVACGNYHMAAITTDGQLYTWGNFDHGKLGHSF 148
Query: 160 KAAKVIPIPTKVECLSGI-------------FTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+ +P K E + +Q ALG + ++ ++ G V S G
Sbjct: 149 DNSAKLPSREKYEYQKNLGSAKLPELVQLNFKVQQVALGDQFTIILSEDGNVYSVGLNKK 208
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G LG+ ++ E T + I +L+ + V+I + G S +D +G ++ +G
Sbjct: 209 GILGYQ--------TKNVDEPTFKQIPDLKNI-VQIDS-GTDFSVALDSDGNMFAWGSNY 258
Query: 267 VDKMLFQEGNHARRPSLISG--------------------GELYTWGSNENGCLGIGSID 306
++ + + P I G G LYTWG +G LG S
Sbjct: 259 FGQLGTPSPSVVQTPQQIKGLPKIKQFSCGEQFIGALSTDGVLYTWGFGGDGQLGTPSKQ 318
Query: 307 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGH 366
+ +P ++Q F ++ +D+VSCG H +S+ K+ G G GQLG
Sbjct: 319 DIPTPHKIQ--FDQN-IDKVSCGQAHVGIVSKNKLYMHGRGKE------------GQLGR 363
Query: 367 GNDVDYIH-----PTIVNFGENVKALQVSCGFNHTGALLE 401
G++ + + P +V ENV ++++CG +H+ A++
Sbjct: 364 GSETESPNSSRYSPLLVM--ENV--IKIACGGSHSFAVVN 399
>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
Length = 435
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 171/389 (43%), Gaps = 67/389 (17%)
Query: 19 KLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC 78
+LG+ C + S + +WG GD GRLG+ + ++++P V ++ ++ +
Sbjct: 85 RLGNVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKR--VQMASA 142
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
GG H + LTE G VY G FG LG L L K +V +S G H++A+
Sbjct: 143 GGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHTAAV 202
Query: 139 TVDGELYMWGKNS-NGQLGLGKKAAK---VIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
T GELY WG++ G+LG G + PTKV+ L GF ++A+T
Sbjct: 203 TESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIALVYCGGF-FTMALTK 261
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G++ SWG + LGHG + + + P+++ LE V + A G H+A +
Sbjct: 262 SGQLWSWGGNANHELGHGTRA---------NNWKPKVVAALEDVTLVQVACGGFHAAALT 312
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
++G+V TWG NG LG G+++ P V
Sbjct: 313 QDGKV------------------------------ITWGYGGNGQLGHGTLENGKEPAIV 342
Query: 315 QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG-HGNDVDY 372
+ ++ ++CG TAAI+E G + TWG + QLG G +
Sbjct: 343 EA-MADKTCTYIACGPAWTAAITENGDLYTWGKNRDY------------QLGIPGLKDEQ 389
Query: 373 IHPTIVNFGE------NVKALQVSCGFNH 395
+ P +V F + V+ L VSCG NH
Sbjct: 390 LDPVLVQFPQALHEKTPVEVLGVSCGANH 418
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 134/305 (43%), Gaps = 52/305 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND-FG 101
WG G +G LG GS E P + K + ++ GG+HT +TE+G +Y G ++ G
Sbjct: 159 WGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHTAAVTESGELYTWGRDEGEG 218
Query: 102 QLGISE----NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LG + G P ++ L + + G + A+T G+L+ WG N+N +LG
Sbjct: 219 RLGHGNPDIMDEGALSRPTKVQALDVPIALVYCGGFFTMALTKSGQLWSWGGNANHELGH 278
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G +A P V L + Q A G + A+T GKV++WG GG+G+LGHG
Sbjct: 279 GTRANNWKP--KVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNGQLGHGT---- 332
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
L + E P +++ + A G +A I EN
Sbjct: 333 ---LENGKE--PAIVEAMADKTCTYIACGPAWTAAITEN--------------------- 366
Query: 278 ARRPSLISGGELYTWGSNENGCLGI-GSIDVLHSPERVQGP---FSESPVDQ--VSCGWK 331
G+LYTWG N + LGI G D P VQ P ++PV+ VSCG
Sbjct: 367 ---------GDLYTWGKNRDYQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGAN 417
Query: 332 HTAAI 336
H I
Sbjct: 418 HGVCI 422
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 156/382 (40%), Gaps = 79/382 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA------------------CGGAHTL 84
WG G +G++G GS ++ PV+ S + + +A CG H++
Sbjct: 40 WGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGLFHSV 99
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
E V+ G D G+LGI +P ++ K V S G H+ A+T G +
Sbjct: 100 LFAEQD-VFVWGKGDGGRLGIDTEFN-QYKPY-VNPRIKRVQMASAGGLHNIALTEVGNV 156
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSW 201
Y WG + G LG G +++P L G + + + G + AVT G++ +W
Sbjct: 157 YTWGYGAFGALGHGSYERELLP-----RLLEGPWKDRIVHVSAGGSHTAAVTESGELYTW 211
Query: 202 GAG-GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
G G GRLGHG + + P ++ L+ + GF A
Sbjct: 212 GRDEGEGRLGHGNPD----IMDEGALSRPTKVQALDVPIALVYCGGFFTMA--------- 258
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
L G+L++WG N N LG G+ P +V +
Sbjct: 259 ----------------------LTKSGQLWSWGGNANHELGHGTRANNWKP-KVVAALED 295
Query: 321 SPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
+ QV+CG H AA++ +GK++TWG+GG+ GQLGHG + P IV
Sbjct: 296 VTLVQVACGGFHAAALTQDGKVITWGYGGN------------GQLGHGTLENGKEPAIVE 343
Query: 380 FGENVKALQVSCGFNHTGALLE 401
+ ++CG T A+ E
Sbjct: 344 AMADKTCTYIACGPAWTAAITE 365
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 137/310 (44%), Gaps = 67/310 (21%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI---PTKVECLSGIFTKQAALGFEQ--- 188
SS + E++ WG+ ++GQ+G G + + +P+ K+ +G+ Q + +
Sbjct: 28 SSGEPAELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLG 87
Query: 189 SVAVTGG---------GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
+V VT G V WG G GRLG E ++Y P + ++ +
Sbjct: 88 NVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTE---------FNQYKPYVNPRIK--R 136
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAV----------------------DKMLFQEGNH 277
V++A+AG LH+ + E G VY +G A D+++
Sbjct: 137 VQMASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGG 196
Query: 278 ARRPSLISGGELYTWGSNE-NGCLGIGSIDV-----LHSPERVQGPFSESPVDQVSCGWK 331
+ ++ GELYTWG +E G LG G+ D+ L P +VQ + P+ V CG
Sbjct: 197 SHTAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQA--LDVPIALVYCGGF 254
Query: 332 HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 391
T A+++ L W WGG+ + +LGHG + P +V E+V +QV+C
Sbjct: 255 FTMALTKSGQL-WSWGGN----------ANHELGHGTRANNWKPKVVAALEDVTLVQVAC 303
Query: 392 GFNHTGALLE 401
G H AL +
Sbjct: 304 GGFHAAALTQ 313
>gi|449685467|ref|XP_002154638.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Hydra magnipapillata]
Length = 1679
Score = 119 bits (299), Expect = 2e-24, Method: Composition-based stats.
Identities = 102/362 (28%), Positives = 170/362 (46%), Gaps = 65/362 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA--HTLFLTETGCVYATGLNDFG 101
G G +G+LGLG S+ + F ++ + + G+ HTL LT+ G VY+ G +FG
Sbjct: 393 GKGSHGKLGLGDSSSKQCLHKLNLFNQNIDQISSSKGSDSHTLALTKNGVVYSWGDGEFG 452
Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG N+ P I G+ K +++ IS G HS+AIT DG+LY WG+ +G+LG G
Sbjct: 453 KLG-HGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITKDGDLYTWGEGEHGRLGHGD 511
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSIL 218
+ + +PT V + Q A G +V ++ V ++GAG +G+LGHG
Sbjct: 512 SSIQ--RVPTLVRSIDA--ASQVAAGCSHTVVLSKDEMTVWTFGAGDNGKLGHGN----- 562
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ EY P+++ L+G+++K AAG S + G +Y+
Sbjct: 563 ----TKMEYYPKIVDALKGIRIKKIAAGTQCSIALTWTGFIYV----------------- 601
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS- 337
WG CLG+G+ D +H ++ + + +S G H A+S
Sbjct: 602 -------------WGCGP--CLGVGAADAVHLLPKIVESLRDVHIVDISLGDCHCLALSA 646
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNHT 396
+ ++ +W G+++ GQ G G+ + PT V + +K Q+S G +H+
Sbjct: 647 DHEVYSW------------GNNNMGQCGLGHCFTPVSLPTKVLALDGIKIEQISTGTSHS 694
Query: 397 GA 398
A
Sbjct: 695 FA 696
Score = 91.3 bits (225), Expect = 8e-16, Method: Composition-based stats.
Identities = 87/319 (27%), Positives = 136/319 (42%), Gaps = 77/319 (24%)
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
YA G N QL + N L P + K +Q+ G + + A+ DG L+ GK S+
Sbjct: 340 YAWGSNSSHQL-VEGNKDKILTPKKNDAFKN-AIQLEAGQYCTFALFDDGSLHACGKGSH 397
Query: 153 GQLGLGKKAAKVIPIPTKVECLS--GIFTKQ-----AALGFE-QSVAVTGGGKVLSWGAG 204
G+LGLG ++K +CL +F + ++ G + ++A+T G V SWG G
Sbjct: 398 GKLGLGDSSSK--------QCLHKLNLFNQNIDQISSSKGSDSHTLALTKNGVVYSWGDG 449
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV----KVKIAAAGFLHSACIDENGRVY 260
G+LGHG + T +L K + GV + +AG HSA I ++G
Sbjct: 450 EFGKLGHGNVA------------TQKLPKVIRGVFKNQIITFISAGSRHSAAITKDG--- 494
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
+LYTWG E+G LG G + P V+ S
Sbjct: 495 ---------------------------DLYTWGEGEHGRLGHGDSSIQRVPTLVR---SI 524
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
QV+ G HT +S+ ++ W +G G+LGHGN +P IV+
Sbjct: 525 DAASQVAAGCSHTVVLSKDEMTVWTFGA----------GDNGKLGHGNTKMEYYPKIVDA 574
Query: 381 GENVKALQVSCGFNHTGAL 399
+ ++ +++ G + AL
Sbjct: 575 LKGIRIKKIAAGTQCSIAL 593
Score = 80.9 bits (198), Expect = 1e-12, Method: Composition-based stats.
Identities = 75/300 (25%), Positives = 137/300 (45%), Gaps = 56/300 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+G++G+LG G++ ++ P V+ F+ + ++ G H+ +T+ G +Y G + G
Sbjct: 446 WGDGEFGKLGHGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITKDGDLYTWGEGEHG 505
Query: 102 QLGISENIGYSLEPLRISGLKKEV---VQISTGYHHSSAITVDGELYMW--GKNSNGQLG 156
+LG ++ S++ R+ L + + Q++ G H+ ++ D E+ +W G NG+LG
Sbjct: 506 RLGHGDS---SIQ--RVPTLVRSIDAASQVAAGCSHTVVLSKD-EMTVWTFGAGDNGKLG 559
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G K+ P V+ L GI K+ A G + S+A+T G + WG G LG G +
Sbjct: 560 HGN--TKMEYYPKIVDALKGIRIKKIAAGTQCSIALTWTGFIYVWGCGPC--LGVGAADA 615
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ P++++ L V + + G H C+
Sbjct: 616 V--------HLLPKIVESLRDVHIVDISLGDCH--CL----------------------- 642
Query: 277 HARRPSLISGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
+L + E+Y+WG+N G G+G + P +V ++Q+S G H+ A
Sbjct: 643 -----ALSADHEVYSWGNNNMGQCGLGHCFTPVSLPTKVLA-LDGIKIEQISTGTSHSFA 696
Score = 77.8 bits (190), Expect = 1e-11, Method: Composition-based stats.
Identities = 53/152 (34%), Positives = 76/152 (50%), Gaps = 4/152 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G+ + + P + A + +K +A G ++ LT TG +Y G
Sbjct: 550 FGAGDNGKLGHGNTKMEYYPKIVDALKGIRIKKIAAGTQCSIALTWTGFIYVWGCGPC-- 607
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ L P + L+ +V IS G H A++ D E+Y WG N+ GQ GLG
Sbjct: 608 LGVGAADAVHLLPKIVESLRDVHIVDISLGDCHCLALSADHEVYSWGNNNMGQCGLGHCF 667
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
V +PTKV L GI +Q + G S A T
Sbjct: 668 TPV-SLPTKVLALDGIKIEQISTGTSHSFAWT 698
>gi|442319170|ref|YP_007359191.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486812|gb|AGC43507.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1095
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 160/346 (46%), Gaps = 52/346 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG GSL+ + PV A+ ++ A+ G H+L + G V+ G N+FGQ
Sbjct: 72 WGDNAYGQLGNGSLQDQRVPV--RAWGLWNISAVGAGDLHSLAMKSDGTVWTWGGNNFGQ 129
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG G P+++ GL EVV+++ G+ HS A+ DG ++ WG N G+LG G
Sbjct: 130 LGDGTTTGRQ-APVQVPGLG-EVVRVAAGFSHSLALKTDGTVWAWGSNGAGRLGDGTTTQ 187
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+++P+ +V+ L I K A G S+A+ G G+V +WG+ +G+LG + G+
Sbjct: 188 RLMPV--QVQGLPTI--KAIAAGNAHSLALDGTGRVWAWGSNSNGQLG----DTTAGY-- 237
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P L+ L +AG HS +G +++G ++ P
Sbjct: 238 ---RMLPALVPGL--TNATGLSAGSNHSLVRQADGTTWVWGANTYGQLGDGTTTSRSAPQ 292
Query: 283 LISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
+SG G ++TWGSN+ G LG G+ + P +V G S
Sbjct: 293 QVSGLAGVDGVLGAELHSLVLKSDGTVWTWGSNQRGQLGDGTQEQRLVPVQVMG-LSGVV 351
Query: 323 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
G A ++ G++ TW GH+ GQLG G+
Sbjct: 352 AVAAGSGQHSVAVMANGEVWTW------------GHNVEGQLGEGS 385
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 156/356 (43%), Gaps = 54/356 (15%)
Query: 66 SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV 125
+A L +A G HTL + G V+A G N +GQLG + ++ P+R GL +
Sbjct: 43 AAETASRLGLVAAGRHHTLAVRSDGTVWAWGDNAYGQLG-NGSLQDQRVPVRAWGL-WNI 100
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
+ G HS A+ DG ++ WG N+ GQLG G + P+ +V L + + A G
Sbjct: 101 SAVGAGDLHSLAMKSDGTVWTWGGNNFGQLGDGTTTGRQAPV--QVPGLGEVV--RVAAG 156
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
F S+A+ G V +WG+ G+GRLG G +T P ++ L +K AA
Sbjct: 157 FSHSLALKTDGTVWAWGSNGAGRLGDGT---------TTQRLMPVQVQGLP--TIKAIAA 205
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG------------------- 286
G HS +D GRV+ +G + ++ + P+L+ G
Sbjct: 206 GNAHSLALDGTGRVWAWGSNSNGQLGDTTAGYRMLPALVPGLTNATGLSAGSNHSLVRQA 265
Query: 287 -GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTW 344
G + WG+N G LG G+ +P++V G + VD V H+ + S+G + TW
Sbjct: 266 DGTTWVWGANTYGQLGDGTTTSRSAPQQVSG---LAGVDGVLGAELHSLVLKSDGTVWTW 322
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
G + GQLG G + P V V A+ G H+ A++
Sbjct: 323 ------------GSNQRGQLGDGTQEQRLVPVQVMGLSGVVAVAAGSG-QHSVAVM 365
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 143/337 (42%), Gaps = 65/337 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G+ + P S ++ LA G H + + G V+ G N GQ
Sbjct: 772 WGDNTYGQLGDGTTLATRSPAQVSGLTD--VEGLAAGEGHVVVVKMDGTVWTWGNNAKGQ 829
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P ++ GL VV ++ GY HS A+ DG ++ WG+N GQLG G
Sbjct: 830 LGDGTTT-RRLVPTQVPGLTG-VVAVAAGYAHSLALKADGTVWGWGENIYGQLGDGTTTQ 887
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+V PT+ + L+ + + A G +A G + +WG G+LG G
Sbjct: 888 RV--APTQAQGLTVVLSM--ASGTYHGLARKADGTLWAWGYNAHGQLGIGT--------- 934
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ P L+ L GV V ++A H +
Sbjct: 935 TTTRLAPTLVPSLSGV-VSLSA-------------------------------THQHSLA 962
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 341
L G ++ WG N NG LG G+ H P Q P S S V VS G++++ A+ ++G +
Sbjct: 963 LKPDGTVWAWGYNSNGQLGDGTTTTRHVP--TQAP-SLSSVKAVSAGFEYSLAVKADGTV 1019
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
+W G + GQLG G PT V
Sbjct: 1020 WSW------------GINDRGQLGSGTATPRATPTQV 1044
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 156/372 (41%), Gaps = 58/372 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG GS R P + ++A G H L + G ++ G N+ GQ
Sbjct: 473 WGDNANGQLGNGSTTDRSNPTQVPGLT--GVVSIAAGPGHALAVKADGTLWTWGDNNTGQ 530
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + P ++ G+ VV ++ G +HS + VDG ++ WG N GQLG G
Sbjct: 531 LGDGTTVDRPI-PTQVPGVTG-VVSVAAGLYHSLVVKVDGTVWAWGSNYEGQLGGGTTTI 588
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+P++ L+G+ A G S+A+ G V +WG G+LG+G
Sbjct: 589 R--PVPSQTPNLTGVVAITA--GLYHSLALKTDGTVWAWGYNLHGQLGNGN--------- 635
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM------------ 270
+T++ P + G V + AG HS I +G V+ +G ++
Sbjct: 636 TTTQQVPTQVPGFSG-GVSL-GAGIYHSLAIKTDGSVWTWGYNYRGQLGDGTTTSRTTPT 693
Query: 271 --------LFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSP--ERVQGPFSE 320
F +L + G + WGSN+ G LG GS ++P R+ G
Sbjct: 694 QVAGFTGVSFLAAGEFHSVALRTDGTAWAWGSNDKGQLGDGSARWHYAPTLSRLVGARGL 753
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
+ D+ + A S+G + W G ++ GQLG G + P V+
Sbjct: 754 AAGDRFTA-----ARKSDGTVWAW------------GDNTYGQLGDGTTLATRSPAQVSG 796
Query: 381 GENVKALQVSCG 392
+V+ L G
Sbjct: 797 LTDVEGLAAGEG 808
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 154/355 (43%), Gaps = 56/355 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV + A+ G H+L L G V+A G N GQ
Sbjct: 573 WGSNYEGQLGGGTTTIR--PVPSQTPNLTGVVAITAGLYHSLALKTDGTVWAWGYNLHGQ 630
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + N P ++ G V + G +HS AI DG ++ WG N GQLG G +
Sbjct: 631 LG-NGNTTTQQVPTQVPGFSGG-VSLGAGIYHSLAIKTDGSVWTWGYNYRGQLGDGTTTS 688
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ PT+V +G+ A G SVA+ G +WG+ G+LG G
Sbjct: 689 RT--TPTQVAGFTGV--SFLAAGEFHSVALRTDGTAWAWGSNDKGQLGDGS--------- 735
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ Y P L + V + AAG +A +G V+ +GD ++ R P+
Sbjct: 736 ARWHYAPTLSRL---VGARGLAAGDRFTAARKSDGTVWAWGDNTYGQLGDGTTLATRSPA 792
Query: 283 LISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
+SG G ++TWG+N G LG G+ P +V G +
Sbjct: 793 QVSGLTDVEGLAAGEGHVVVVKMDGTVWTWGNNAKGQLGDGTTTRRLVPTQVPG---LTG 849
Query: 323 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 376
V V+ G+ H+ A+ ++G + WGWG E+ + GQLG G + PT
Sbjct: 850 VVAVAAGYAHSLALKADGTV--WGWG-------ENIY---GQLGDGTTTQRVAPT 892
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 150/380 (39%), Gaps = 58/380 (15%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG YG+LG G+ SR P S + + H+L L G V+ G N G
Sbjct: 271 VWGANTYGQLGDGTTTSRSAPQQVSGLA--GVDGVLGAELHSLVLKSDGTVWTWGSNQRG 328
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG L P+++ GL V + HS A+ +GE++ WG N GQLG G +
Sbjct: 329 QLGDGTQE-QRLVPVQVMGLSGVVAVAAGSGQHSVAVMANGEVWTWGHNVEGQLGEGSSS 387
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+P + L + A G +A G V +WG G+LG G + L
Sbjct: 388 YSA--VPKRSHAL--VERTSVAAGRYHGLASKPDGTVWAWGDNAKGQLGDGTTAQRL--- 440
Query: 222 RSTSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
L ++ G+ +A AAG S + +G V+ +GD A ++
Sbjct: 441 ---------LPTQVPGLTNMVAVAAGHHSSLALKADGTVWAWGDNANGQLGNGSTTDRSN 491
Query: 281 PSLISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
P+ + G G L+TWG N G LG G+ P +V G
Sbjct: 492 PTQVPGLTGVVSIAAGPGHALAVKADGTLWTWGDNNTGQLGDGTTVDRPIPTQVPG---V 548
Query: 321 SPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
+ V V+ G H+ + +G + W WG ++ GQLG G I P
Sbjct: 549 TGVVSVAAGLYHSLVVKVDGTV--WAWGSNY----------EGQLGGGTTT--IRPVPSQ 594
Query: 380 FGENVKALQVSCGFNHTGAL 399
+ ++ G H+ AL
Sbjct: 595 TPNLTGVVAITAGLYHSLAL 614
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G+ R P + ++A G H L G ++A G N GQ
Sbjct: 872 WGENIYGQLGDGTTTQRVAPTQAQGLTV--VLSMASGTYHGLARKADGTLWAWGYNAHGQ 929
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LGI L P + L VV +S + HS A+ DG ++ WG NSNGQLG G
Sbjct: 930 LGIGTTT-TRLAPTLVPSLSG-VVSLSATHQHSLALKPDGTVWAWGYNSNGQLGDGTTTT 987
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +PT+ LS + K + GFE S+AV G V SWG G+LG G
Sbjct: 988 R--HVPTQAPSLSSV--KAVSAGFEYSLAVKADGTVWSWGINDRGQLGSGT--------- 1034
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
+T TP + L V + A H+ + +G + FGD ++
Sbjct: 1035 ATPRATPTQVAGLN--SVTLLLAARAHALVVSADGTMRGFGDNEAGQL 1080
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 164/381 (43%), Gaps = 64/381 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ SR P + F S LA G H++ L G +A G ND GQ
Sbjct: 673 WGYNYRGQLGDGTTTSRTTPTQVAGFTGVSF--LAAGEFHSVALRTDGTAWAWGSNDKGQ 730
Query: 103 LGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG S Y+ R+ G + ++ G ++A DG ++ WG N+ GQLG G
Sbjct: 731 LGDGSARWHYAPTLSRLVGARG----LAAGDRFTAARKSDGTVWAWGDNTYGQLGDGTTL 786
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
A P +V L+ + + A G V V G V +WG G+LG G
Sbjct: 787 A--TRSPAQVSGLTDV--EGLAAGEGHVVVVKMDGTVWTWGNNAKGQLGDGT-------- 834
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
+T P + L GV AAG+ HS + +G V+ +G+ ++ +G +R
Sbjct: 835 -TTRRLVPTQVPGLTGVVA--VAAGYAHSLALKADGTVWGWGENIYGQL--GDGTTTQRV 889
Query: 281 -P----------SLISG----------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
P S+ SG G L+ WG N +G LGIG+ +P V S
Sbjct: 890 APTQAQGLTVVLSMASGTYHGLARKADGTLWAWGYNAHGQLGIGTTTTRLAPTLVP---S 946
Query: 320 ESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
S V +S +H+ A+ +G + WG ++S GQLG G PT
Sbjct: 947 LSGVVSLSATHQHSLALKPDGTVWAWG------------YNSNGQLGDGTTTTRHVPTQA 994
Query: 379 NFGENVKALQVSCGFNHTGAL 399
+VKA VS GF ++ A+
Sbjct: 995 PSLSSVKA--VSAGFEYSLAV 1013
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R P + S+KA++ G ++L + G V++ G+ND GQ
Sbjct: 972 WGYNSNGQLGDGTTTTRHVPTQAPSLS--SVKAVSAGFEYSLAVKADGTVWSWGINDRGQ 1029
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P +++GL V + H+ ++ DG + +G N GQLG G
Sbjct: 1030 LG-SGTATPRATPTQVAGL-NSVTLLLAARAHALVVSADGTMRGFGDNEAGQLGAGDTLI 1087
Query: 163 KVIP 166
++ P
Sbjct: 1088 RLAP 1091
>gi|118396198|ref|XP_001030441.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila]
gi|89284744|gb|EAR82778.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila
SB210]
Length = 1984
Score = 119 bits (299), Expect = 2e-24, Method: Composition-based stats.
Identities = 94/330 (28%), Positives = 146/330 (44%), Gaps = 75/330 (22%)
Query: 90 GCVYATGLNDFGQLG---------ISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAIT 139
G +++ G N GQ+G +S+ I + P I LK +V ++ GY HS AIT
Sbjct: 1500 GVMFSWGQNTEGQMGNVYDPKQNLLSKKIKVNF-PKLIVPLKDTIVTSVACGYQHSVAIT 1558
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
G + WG NS+ QLGLG+K+ +P PT + L+ I + + G E ++A+ G+V
Sbjct: 1559 YAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPALTNI--QSVSCGSEHTLALDYIGQVF 1616
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G G LGHG E +P++I+ L+G+ V G LHS + +N +V
Sbjct: 1617 SWGNGEGGLLGHGNEDVCP---------SPKIIEALKGLNVDFIVCGGLHSLVLTKNRQV 1667
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGI------GSIDVLHSPER 313
Y+WG NE G LGI L +P+R
Sbjct: 1668 ------------------------------YSWGRNEGGQLGIDKKLFTNEKCYLTTPKR 1697
Query: 314 VQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD- 371
V+G V Q++ G H+ A++ G++ WG+ + GQ+G G D
Sbjct: 1698 VKGNLEGVGVIQIAAGEAHSLALALNGQVYGWGY------------NMNGQIGLGMQTDT 1745
Query: 372 --YIHPTIVNFGENVKALQVSCGFNHTGAL 399
P ++ ++ + CG N + L
Sbjct: 1746 YPVYEPQLIPKLNKIEKI-FCCGLNDSNQL 1774
Score = 89.4 bits (220), Expect = 3e-15, Method: Composition-based stats.
Identities = 93/361 (25%), Positives = 152/361 (42%), Gaps = 54/361 (14%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEVVQISTG 131
+ ++ACG H++ +T G V A G N QLG+ E S+ P I L + +S G
Sbjct: 1544 VTSVACGYQHSVAITYAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPALTN-IQSVSCG 1602
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
H+ A+ G+++ WG G LG G + V P P +E L G+ G S+
Sbjct: 1603 SEHTLALDYIGQVFSWGNGEGGLLGHGNE--DVCPSPKIIEALKGLNVDFIVCGGLHSLV 1660
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY--TPRLIK-ELEGVKVKIAAAGFL 248
+T +V SWG G+LG ++ + Y TP+ +K LEGV V AAG
Sbjct: 1661 LTKNRQVYSWGRNEGGQLGIDKK-----LFTNEKCYLTTPKRVKGNLEGVGVIQIAAGEA 1715
Query: 249 HSACIDENGRVYIFG---DRAVDKMLFQEGNHARRPSLISG----GELYTWGSNENGCLG 301
HS + NG+VY +G + + + + P LI +++ G N++ LG
Sbjct: 1716 HSLALALNGQVYGWGYNMNGQIGLGMQTDTYPVYEPQLIPKLNKIEKIFCCGLNDSNQLG 1775
Query: 302 I-----------GSIDVLHSPE------------RVQGPFSESPVDQVSCGWKHTAAI-- 336
+ +I + P+ + F + PV VSCG H+ A+
Sbjct: 1776 LEKEPIKITSTTNNILDQYKPQDQKRAVTDVFIPKKMDCFHQIPVLHVSCGHNHSLALVV 1835
Query: 337 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
+ + WG + G G+ G + V P + + ++V ++CG H
Sbjct: 1836 ADTKHYMLFAWG-----MHKHGQLGIGETGQNSSV----PRPITYLQDVTTYSMACGSYH 1886
Query: 396 T 396
+
Sbjct: 1887 S 1887
Score = 88.6 bits (218), Expect = 5e-15, Method: Composition-based stats.
Identities = 52/144 (36%), Positives = 80/144 (55%), Gaps = 14/144 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNG+ G LG G+ + P + A + ++ + CGG H+L LT+ VY+ G N+ GQ
Sbjct: 1618 WGNGEGGLLGHGNEDVCPSPKIIEALKGLNVDFIVCGGLHSLVLTKNRQVYSWGRNEGGQ 1677
Query: 103 LGISENI-----GYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
LGI + + Y P R+ G + V+QI+ G HS A+ ++G++Y WG N NGQ+
Sbjct: 1678 LGIDKKLFTNEKCYLTTPKRVKGNLEGVGVIQIAAGEAHSLALALNGQVYGWGYNMNGQI 1737
Query: 156 GLGKKA-------AKVIPIPTKVE 172
GLG + ++IP K+E
Sbjct: 1738 GLGMQTDTYPVYEPQLIPKLNKIE 1761
Score = 47.8 bits (112), Expect = 0.010, Method: Composition-based stats.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 29/160 (18%)
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLG--------IGS 304
I+ + YI +++ + + E +++ + G +++WG N G +G + S
Sbjct: 1466 IESKNKGYIQSNQSGNIVQILEKDYSTFSKKDAVGVMFSWGQNTEGQMGNVYDPKQNLLS 1525
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ + ++ P ++ V V+CG++H+ AI+ G +L WG ++ HS Q
Sbjct: 1526 KKIKVNFPKLIVPLKDTIVTSVACGYQHSVAITYAGTVLAWG---------DNSHS---Q 1573
Query: 364 LGHGNDVDYIHPTIVNFGENVKAL----QVSCGFNHTGAL 399
LG G P+ V F + AL VSCG HT AL
Sbjct: 1574 LGLGEK----SPSSVPFPTPIPALTNIQSVSCGSEHTLAL 1609
Score = 42.0 bits (97), Expect = 0.61, Method: Composition-based stats.
Identities = 52/224 (23%), Positives = 79/224 (35%), Gaps = 77/224 (34%)
Query: 43 WGNGDYGRLGLGS---------LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WG + G+LG+ L + R V E + +A G AH+L L G VY
Sbjct: 1670 WGRNEGGQLGIDKKLFTNEKCYLTTPKR--VKGNLEGVGVIQIAAGEAHSLALALNGQVY 1727
Query: 94 ATGLNDFGQLGI-------------------------------SENIGYSLEPLRISGLK 122
G N GQ+G+ S +G EP++I+
Sbjct: 1728 GWGYNMNGQIGLGMQTDTYPVYEPQLIPKLNKIEKIFCCGLNDSNQLGLEKEPIKITSTT 1787
Query: 123 KE------------------------------VVQISTGYHHSSAITV-DGELYM---WG 148
V+ +S G++HS A+ V D + YM WG
Sbjct: 1788 NNILDQYKPQDQKRAVTDVFIPKKMDCFHQIPVLHVSCGHNHSLALVVADTKHYMLFAWG 1847
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ +GQLG+G+ +P + L + T A G S+ V
Sbjct: 1848 MHKHGQLGIGETGQNS-SVPRPITYLQDVTTYSMACGSYHSLVV 1890
>gi|91083383|ref|XP_967337.1| PREDICTED: similar to Sergef protein [Tribolium castaneum]
gi|270006903|gb|EFA03351.1| hypothetical protein TcasGA2_TC013336 [Tribolium castaneum]
Length = 364
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 172/374 (45%), Gaps = 58/374 (15%)
Query: 43 WGNGDYGRLGLG-----SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
WG YG+LGLG + + + + ++ A+A G HTL L + G VY G
Sbjct: 6 WGANSYGQLGLGHKSDEEVSPKEVNLGDTDLVADNIVAIAGGAGHTLILDKNGFVYCCGW 65
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
N GQLG S++ +L+ +I LK +VQIS G+ S+A++ G+ ++WG NS QLG
Sbjct: 66 NSKGQLGTSDD---TLKITQIEILKGFRIVQISCGWDFSAAVSECGKQFVWGNNSYTQLG 122
Query: 157 LGKKAAKVIPIPTKVECLSGIFT--KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
L K+ IP++++ + T KQ + G S + G +L G G G+LG G
Sbjct: 123 L-SKSITCTGIPSRLQVSQKLATGFKQVSCGLRHSAMLNKDGGLLVAGTGSKGQLGLGDN 181
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
+L + + +LE + V I A+G H+ + E+G VY +G+ ++
Sbjct: 182 FDDNNYLSISK------VPDLEDI-VSI-ASGQHHTVVLKEDGTVYSWGENKYGQLGIDP 233
Query: 271 ----------LFQEGN-------HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + N +L GE++TWG N G LG +V + PE+
Sbjct: 234 NISNSFVPMEILHDANLGSVYAGWTHTAALSKSGEVFTWGRNSYGQLG-AQREVTYKPEK 292
Query: 314 VQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
+ G V Q+S G +H A++ +GK+ WGW + G G G+ D
Sbjct: 293 IPGL---KDVTQLSVGSEHNLAVTKDGKLFVWGW------------NEHGSCGTGDKTDV 337
Query: 373 IHPTIVNFGENVKA 386
PT + VKA
Sbjct: 338 CKPTQIFANRKVKA 351
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 2 LGRSLTAM---TKYYLKQDIKLGSKLGICKRWISSTLQRRFAAL-WGNGDYGRLGLG-SL 56
L +S+T ++ + Q + G K C S+ L + L G G G+LGLG +
Sbjct: 123 LSKSITCTGIPSRLQVSQKLATGFKQVSCGLRHSAMLNKDGGLLVAGTGSKGQLGLGDNF 182
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
+ + + + ++A G HT+ L E G VY+ G N +GQLGI NI S P+
Sbjct: 183 DDNNYLSISKVPDLEDIVSIASGQHHTVVLKEDGTVYSWGENKYGQLGIDPNISNSFVPM 242
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
I + + G+ H++A++ GE++ WG+NS GQLG + +V P K+ L
Sbjct: 243 EILH-DANLGSVYAGWTHTAALSKSGEVFTWGRNSYGQLGAQR---EVTYKPEKIPGLKD 298
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
+ Q ++G E ++AVT GK+ WG G G G ++ + + T + R +K
Sbjct: 299 V--TQLSVGSEHNLAVTKDGKLFVWGWNEHGSCGTGDKTDV---CKPTQIFANRKVK 350
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 21/227 (9%)
Query: 42 LWGNGDYGRLGLG-SLESRWRPVVCSAFEKHS--LKALACGGAHTLFLTETGCVYATGLN 98
+WGN Y +LGL S+ P +K + K ++CG H+ L + G + G
Sbjct: 112 VWGNNSYTQLGLSKSITCTGIPSRLQVSQKLATGFKQVSCGLRHSAMLNKDGGLLVAGTG 171
Query: 99 DFGQLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQLG+ +N + L IS + +++V I++G HH+ + DG +Y WG+N GQLG
Sbjct: 172 SKGQLGLGDNFDDN-NYLSISKVPDLEDIVSIASGQHHTVVLKEDGTVYSWGENKYGQLG 230
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ + +P +E L G+ + A++ G+V +WG G+LG +E +
Sbjct: 231 IDPNISNSF-VP--MEILHDANLGSVYAGWTHTAALSKSGEVFTWGRNSYGQLGAQREVT 287
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
Y P I L+ V + G H+ + ++G+++++G
Sbjct: 288 ----------YKPEKIPGLK--DVTQLSVGSEHNLAVTKDGKLFVWG 322
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 131/336 (38%), Gaps = 102/336 (30%)
Query: 144 LYMWGKNSNGQLGLGKK------------------AAKVIPIP----------------- 168
LY WG NS GQLGLG K A ++ I
Sbjct: 3 LYSWGANSYGQLGLGHKSDEEVSPKEVNLGDTDLVADNIVAIAGGAGHTLILDKNGFVYC 62
Query: 169 ------------------TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
T++E L G Q + G++ S AV+ GK WG +LG
Sbjct: 63 CGWNSKGQLGTSDDTLKITQIEILKGFRIVQISCGWDFSAAVSECGKQFVWGNNSYTQLG 122
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
+ + G + S + + +L + V + G HSA ++++G + + G + ++
Sbjct: 123 LSKSITCTG-IPSRLQVSQKLATGFKQV-----SCGLRHSAMLNKDGGLLVAGTGSKGQL 176
Query: 271 ----LFQEGNH---ARRP------SLISG----------GELYTWGSNENGCLGIG-SID 306
F + N+ ++ P S+ SG G +Y+WG N+ G LGI +I
Sbjct: 177 GLGDNFDDNNYLSISKVPDLEDIVSIASGQHHTVVLKEDGTVYSWGENKYGQLGIDPNIS 236
Query: 307 VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 365
P + ++ + V GW HTAA+S+ G++ TW G +S GQLG
Sbjct: 237 NSFVPMEI---LHDANLGSVYAGWTHTAALSKSGEVFTW------------GRNSYGQLG 281
Query: 366 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+V Y I + Q+S G H A+ +
Sbjct: 282 AQREVTYKPEKIPGLKD---VTQLSVGSEHNLAVTK 314
>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 1379
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 159/357 (44%), Gaps = 65/357 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G+ PV + A++ G AHT+ L G V+A G N +GQ
Sbjct: 1051 WGGNAYGQLGDGTTAQSLTPVQVQGLT--GVTAISAGDAHTVALRRDGTVWAWGRNSWGQ 1108
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+++ GL V+ I+ G H+ A+ DG ++ WG+NS GQLG G
Sbjct: 1109 LGDGTTT-HRATPVQVQGLTG-VIAIAAGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTH 1166
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V+ L+G+ A G +VA+ G V +WG G+LG G
Sbjct: 1167 RATPV--QVQGLTGVIA--IAAGSLHTVALRQDGTVWAWGFNDLGQLGDG---------T 1213
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T TP ++ L GV AAG+ H+A + ++G
Sbjct: 1214 TTRRLTPAQVQGLTGVTT--IAAGYFHTAAVRQDGTA----------------------- 1248
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKIL 342
+TWG N G LG G+ +P +VQG + V ++ G+ HT + E +
Sbjct: 1249 -------WTWGFNLWGQLGDGTFTDRATPVQVQG---LTGVSALAAGYAHTVVVGEDGTV 1298
Query: 343 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
W W G++SG QLG+G+ D P V A ++ G HT A+
Sbjct: 1299 -WAW----------GNNSGTQLGNGSSTDRSTP--VQVEALTGAFSLAAGRFHTVAM 1342
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 169/374 (45%), Gaps = 57/374 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN D G+LG G+ R+ PV A+A G HT+ ++ G V+ G N GQ
Sbjct: 97 WGNNDDGQLGDGTTTRRFSPVQV----MTGATAIAAGIYHTVAASQDGTVWTWGRNSSGQ 152
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG +I P+++ GL V ++ G +HS+A+ G ++ WG N GQLG G
Sbjct: 153 LGDGTSI-QRFSPVQVQGLTG-VTAVAAGRNHSAALGQGGTVWTWGDNLVGQLGDGTSTQ 210
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V+ L+G+ A ++VA+ G V +WG SG+LG G
Sbjct: 211 RLTPV--QVQGLTGVIAISA--NDSETVALRQDGTVWAWGNNSSGQLGDG---------T 257
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T +TP + L GV A GF + + ++G ++ +G + ++ + RP
Sbjct: 258 TTVRFTPVQVLGLTGVTAIAAGGGF--AVALRQDGTLWAWGSNSRGQLGNGTTFGSYRPE 315
Query: 283 LISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
+ G G L+ WG+N +G LG G+ V +P +VQG +
Sbjct: 316 QVQGLTGVTAIAASGIHTVALRQDGTLWAWGNNSSGQLGDGTTTVRFTPVQVQG---LTG 372
Query: 323 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 382
V ++ G+ +T A + + W W G + GQLG G + P V
Sbjct: 373 VTAIAAGYLYTVASKQDGTV-WAW----------GDNEWGQLGDGTTTRRLTPVQVQGLT 421
Query: 383 NVKALQVSCGFNHT 396
V A ++ G+ +T
Sbjct: 422 GVTA--IAAGYLYT 433
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 172/381 (45%), Gaps = 59/381 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ +RP + A+A G HT+ L + G ++A G N GQ
Sbjct: 295 WGSNSRGQLGNGTTFGSYRPEQVQGLT--GVTAIAASGIHTVALRQDGTLWAWGNNSSGQ 352
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG P+++ GL V I+ GY ++ A DG ++ WG N GQLG G
Sbjct: 353 LGDGTTT-VRFTPVQVQGLTG-VTAIAAGYLYTVASKQDGTVWAWGDNEWGQLGDGTTTR 410
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V+ L+G+ A G+ +VA G V +WG +LG G S
Sbjct: 411 RLTPV--QVQGLTGV--TAIAAGYLYTVASKQDGTVWAWGDNKRSQLGEGAVS------- 459
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
+TP ++ LEG+ IAA+ L + + ++G V+ +GD A ++ +G RR
Sbjct: 460 --QRHTPGEVQGLEGI-TAIAASNLL-TVAVRQDGTVWAWGDNARGQL--GDGTTTRRLT 513
Query: 281 PSLISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
P + G G ++ WG G LG G+ +P +VQG
Sbjct: 514 PVQVQGLAGVTAVAASDYHLVAVRQDGTVWAWGVGFWGQLGDGTGMDRSTPVQVQG---L 570
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
+ V ++ G HT A+ + + W W G ++ GQLG G ++ P V
Sbjct: 571 TGVTAIAAGSNHTVALRQDGTV-WAW----------GFNNYGQLGDGTTAGHLTP--VQV 617
Query: 381 GENVKALQVSCGFNHTGALLE 401
A+ ++ G +HT ALL+
Sbjct: 618 PGVTGAVAIAAGGSHTVALLQ 638
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 169/385 (43%), Gaps = 51/385 (13%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
Q R WG+ +G+LG G+ R PV + A+A GG H + G ++
Sbjct: 738 QDRTLWAWGDNHWGQLGDGTTTRRLTPVQVQGLMD--VTAMAAGGYHMAAAGQDGTLWTW 795
Query: 96 GLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
GLN +GQLG + Y L P+++ GL I+ G H+ A+ DG ++ WG N +GQ
Sbjct: 796 GLNSYGQLG-GGPLSYRLLPVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQ 854
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G A + P+ +V+ L + T AA G+ + A G + +WG G+LG G
Sbjct: 855 LGDGTTAQSLTPVQVQVQGLMDV-TAMAAGGYHMAAAGQ-DGTLWTWGLNSYGQLGGGPL 912
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S L P ++ L + V AAG H A ++G ++ +G + ++
Sbjct: 913 SYRL---------LPVQVQGL--MDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGP 961
Query: 275 GNHARRPSLISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERV 314
++ P + G G L+TWG N G LG G + +P +V
Sbjct: 962 LSYRLLPVQVQGLMSVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSQSLTPVQV 1021
Query: 315 QGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
Q + V ++ G+ HT A+ + + W WGG ++ GQLG G +
Sbjct: 1022 Q-VQGLTGVAAIAAGFSHTLAVRQDGTV-WSWGG----------NAYGQLGDGTTAQSLT 1069
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P V V A +S G HT AL
Sbjct: 1070 PVQVQGLTGVTA--ISAGDAHTVAL 1092
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 159/355 (44%), Gaps = 60/355 (16%)
Query: 65 CSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
+AF + LA G G HTL + + G V+A G ND GQLG P+++
Sbjct: 66 ANAFAAPAGPVLAAGNGNHTLAVRQDGTVWAWGNNDDGQLGDGTTT-RRFSPVQV---MT 121
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
I+ G +H+ A + DG ++ WG+NS+GQLG G + P+ +V+ L+G+ A
Sbjct: 122 GATAIAAGIYHTVAASQDGTVWTWGRNSSGQLGDGTSIQRFSPV--QVQGLTGV--TAVA 177
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G S A+ GG V +WG G+LG G ST TP ++ L GV + I+
Sbjct: 178 AGRNHSAALGQGGTVWTWGDNLVGQLGDG---------TSTQRLTPVQVQGLTGV-IAIS 227
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISG--------------- 286
A + + ++G V+ +G+ + ++ +G R P + G
Sbjct: 228 ANDS-ETVALRQDGTVWAWGNNSSGQL--GDGTTTVRFTPVQVLGLTGVTAIAAGGGFAV 284
Query: 287 -----GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 341
G L+ WGSN G LG G+ + PE+VQG + V ++ HT A+ +
Sbjct: 285 ALRQDGTLWAWGSNSRGQLGNGTTFGSYRPEQVQG---LTGVTAIAASGIHTVALRQDGT 341
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
L W W G++S GQLG G P V V A ++ G+ +T
Sbjct: 342 L-WAW----------GNNSSGQLGDGTTTVRFTPVQVQGLTGVTA--IAAGYLYT 383
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 43/326 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +YG+LG G+ PV A+A GG+HT+ L + G V+ G N +GQ
Sbjct: 595 WGFNNYGQLGDGTTAGHLTPVQVPGVT--GAVAIAAGGSHTVALLQDGTVWTWGYNIWGQ 652
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+++ GL +V+ I+T H+ A+ DG ++ WG NS+GQLG G
Sbjct: 653 LGDGTTT-HRHSPVQVQGLA-DVIAIATNNGHTVAVRQDGTVWTWGLNSSGQLGDGTTTQ 710
Query: 163 KVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ P+ + + I T + Q+VA+ + +WG G+LG G
Sbjct: 711 RLTPVQVHGLTDATAILTSSS-----QTVAMRQDRTLWAWGDNHWGQLGDG--------- 756
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+T TP ++ L + V AAG H A ++G ++ +G + ++ ++ P
Sbjct: 757 TTTRRLTPVQVQGL--MDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLP 814
Query: 282 SLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
+ G G ++ WGSN +G LG G+ +P +VQ
Sbjct: 815 VQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQLGDGTTAQSLTPVQVQVQGL 874
Query: 320 ESPVDQVSCGWKHTAAISEGKILTWG 345
+ G+ AA +G + TWG
Sbjct: 875 MDVTAMAAGGYHMAAAGQDGTLWTWG 900
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 171/384 (44%), Gaps = 59/384 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G L R PV + A+A G +HT+ + + G V+A G N GQ
Sbjct: 795 WGLNSYGQLGGGPLSYRLLPVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQ 854
Query: 103 LGISENIGYSLEP--LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG SL P +++ GL +V ++ G +H +A DG L+ WG NS GQLG G
Sbjct: 855 LG-DGTTAQSLTPVQVQVQGL-MDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPL 912
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +++P+ +V+ L + T AA G+ + A G + +WG G+LG G S L
Sbjct: 913 SYRLLPV--QVQGLMDV-TAMAAGGYHMAAAGQ-DGTLWTWGLNSYGQLGGGPLSYRL-- 966
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------------DRAVD 268
P ++ L + V AAG H A ++G ++ +G +++
Sbjct: 967 -------LPVQVQGL--MSVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSQSLT 1017
Query: 269 KMLFQEGNHARRPSLISG----------GELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
+ Q ++ +G G +++WG N G LG G+ +P +VQG
Sbjct: 1018 PVQVQVQGLTGVAAIAAGFSHTLAVRQDGTVWSWGGNAYGQLGDGTTAQSLTPVQVQG-- 1075
Query: 319 SESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 377
+ V +S G HT A+ +G + W G +S GQLG G P
Sbjct: 1076 -LTGVTAISAGDAHTVALRRDGTVWAW------------GRNSWGQLGDGTTTHRATPVQ 1122
Query: 378 VNFGENVKALQVSCGFNHTGALLE 401
V V A ++ G HT AL +
Sbjct: 1123 VQGLTGVIA--IAAGSLHTVALRQ 1144
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 145/325 (44%), Gaps = 45/325 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV + A+A H + + + G V+A G+ +GQ
Sbjct: 495 WGDNARGQLGDGTTTRRLTPVQVQGLA--GVTAVAASDYHLVAVRQDGTVWAWGVGFWGQ 552
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S P+++ GL V I+ G +H+ A+ DG ++ WG N+ GQLG G A
Sbjct: 553 LGDGTGMDRS-TPVQVQGLTG-VTAIAAGSNHTVALRQDGTVWAWGFNNYGQLGDGTTAG 610
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V ++G A G +VA+ G V +WG G+LG G
Sbjct: 611 HLTPV--QVPGVTGAVA--IAAGGSHTVALLQDGTVWTWGYNIWGQLGDG---------T 657
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
+T ++P ++ L V G H+ + ++G V+ +G + ++ +G +R
Sbjct: 658 TTHRHSPVQVQGLADVIAIATNNG--HTVAVRQDGTVWTWGLNSSGQL--GDGTTTQRLT 713
Query: 281 PSLISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
P + G L+ WG N G LG G+ +P +VQG
Sbjct: 714 PVQVHGLTDATAILTSSSQTVAMRQDRTLWAWGDNHWGQLGDGTTTRRLTPVQVQGLMDV 773
Query: 321 SPVDQVSCGWKHTAAISEGKILTWG 345
+ + + G+ AA +G + TWG
Sbjct: 774 TAM--AAGGYHMAAAGQDGTLWTWG 796
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
Q A WG +G+LG G+ R PV + ALA G AHT+ + E G V+A
Sbjct: 1244 QDGTAWTWGFNLWGQLGDGTFTDRATPVQVQGLT--GVSALAAGYAHTVVVGEDGTVWAW 1301
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G N QLG + S P+++ L ++ G H+ A++ DG + WG+N+ GQ+
Sbjct: 1302 GNNSGTQLGNGSSTDRS-TPVQVEALTG-AFSLAAGRFHTVAMSPDGAGWGWGRNNLGQV 1359
Query: 156 GLGKKAAKVIPIPTKVE 172
G G A + P+ V+
Sbjct: 1360 GDGTTADRPTPVNVMVQ 1376
>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
Length = 1060
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 168/363 (46%), Gaps = 52/363 (14%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+LGLG LE P +F + +ACG HTLF+ + G V + G ND+
Sbjct: 14 WGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCGNNDY 73
Query: 101 GQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + P I L ++ V+Q S+G HS+ +T G+++ WG N + QLG G+
Sbjct: 74 GQLGHEKPCK---RPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRGQ 130
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ IP V L+ Q A G +V +T G++ +WG+ HGQ LG
Sbjct: 131 VDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYTWGSN-----NHGQ----LG 181
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
T + P+ + + G+ + AAG H+ + +G ++ +G + ++ +
Sbjct: 182 LANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLGVGDDQDRG 241
Query: 280 RPSLIS----------------------GGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
P+L+ G ++T+G+ G LG + + P +V
Sbjct: 242 APTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNTSNNELLPRKVFEL 301
Query: 318 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
S V Q++CG KH+ A S G++ +G GG+ GQLG G+ V+ + P
Sbjct: 302 MGSS-VTQIACGRKHSIAYVPSSGRVYVFGLGGN------------GQLGTGSTVNRMSP 348
Query: 376 TIV 378
+V
Sbjct: 349 AMV 351
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 158/349 (45%), Gaps = 47/349 (13%)
Query: 43 WGNGDYGRLGLGSLESRWR--PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ + +LG G ++S P + H + +ACG AHT+ LT TG +Y G N+
Sbjct: 118 WGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYTWGSNNH 177
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG++ + EP +S + +V+++ G H+ +T+ G L+ WG NS GQLG+G
Sbjct: 178 GQLGLANKTPQN-EPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLGVGD 236
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ PT V+ L A G + S+A+T G V ++GAG G+LGH
Sbjct: 237 DQDR--GAPTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNT------ 288
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S +E PR + EL G V A G HS A + +GRVY+FG
Sbjct: 289 ---SNNELLPRKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFG--------------- 330
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
GG NG LG GS SP V+GPF + V G H + +
Sbjct: 331 ------LGG---------NGQLGTGSTVNRMSPAMVKGPFVAFGAEVVDKGAIHFSQHGQ 375
Query: 339 GKILTWG-WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
++ + G TF +S H ++ + +IV ++V A
Sbjct: 376 PHMVVRHLYAGGDQTFIYATAASCKVPPHDCRINPLVQSIVRISKDVVA 424
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 118/277 (42%), Gaps = 55/277 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
EVV I+ G H+ + DG + G N GQLG K + P ++ L QA+
Sbjct: 45 EVVHIACGLQHTLFVKKDGRVLSCGNNDYGQLGHEKPCKR----PALIDSLGERNVLQAS 100
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S +T G+V +WG+ +LG GQ + S S PR+++ L KV
Sbjct: 101 SGTKHSTVLTDAGQVFTWGSNEDNQLGRGQ-------VDSASTSIPRMVRGLADHKVVQV 153
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
A G H+ L + G++YTWGSN +G LG+
Sbjct: 154 ACGSAHTV------------------------------GLTATGQIYTWGSNNHGQLGLA 183
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 362
+ + P+ V S P+ +V+ G H ++ G + WG +S G
Sbjct: 184 NKTPQNEPQWVSC-ISGLPIVRVAAGADHNLVLTISGALFAWGC------------NSFG 230
Query: 363 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
QLG G+D D PT+V N ++CG +H+ AL
Sbjct: 231 QLGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLAL 267
>gi|443704116|gb|ELU01328.1| hypothetical protein CAPTEDRAFT_228560 [Capitella teleta]
Length = 1874
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 150/324 (46%), Gaps = 39/324 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + + SA + + L H+L LTE+G V++ G D+
Sbjct: 1046 GEGSYGRLGQGNSDDLHSLTIVSALQGFVVTQLVTSVGSDGHSLALTESGEVFSWGDGDY 1105
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EV+QI+ G+ HS+ +TVDG+L +G G+LGLG
Sbjct: 1106 GKLG-HGNSDRQRRPRQIEALQGEEVIQIACGFKHSAVVTVDGKLLTFGNGDYGRLGLGT 1164
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ P +V+ L A G +V V+ G ++G G G+LG G S
Sbjct: 1165 VCNR--KTPERVKALENYHIGHVACGLNHTVCVSADGSTTWAFGDGDYGKLGLGNTS--- 1219
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
++ TP I+ L G+KVK A G S + +G V +G DR + + Q H
Sbjct: 1220 ------AKSTPVKIEALSGLKVKKVACGTQFSVALTRDGFVLTWGQDRLIGQTEAQMRGH 1273
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
+L S G ++ WG N +G LG+G + P+ + G
Sbjct: 1274 CTPQKVTTLAGHFIEEVVVGSEHTLALTSDGNVWGWGLNADGQLGLGHTGTVREPQLLGG 1333
Query: 317 PFSESPVDQVSCGWKHTAAISEGK 340
S P+ Q+S G H+AA S K
Sbjct: 1334 LGSSEPIKQISAGRTHSAAWSGAK 1357
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 124/290 (42%), Gaps = 56/290 (19%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L PL S QI G + + I +G + G+ S G+LG G + + T V
Sbjct: 1012 LTPLHTSSFSS-AQQIICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHSLTIVS 1068
Query: 173 CLSGIFTKQ--AALGFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
L G Q ++G + S+A+T G+V SWG G G+LGHG S + P
Sbjct: 1069 ALQGFVVTQLVTSVGSDGHSLALTESGEVFSWGDGDYGKLGHGN---------SDRQRRP 1119
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
R I+ L+G +V A GF HSA + +G++ FG+ G++ R
Sbjct: 1120 RQIEALQGEEVIQIACGFKHSAVVTVDGKLLTFGN----------GDYGR---------- 1159
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 349
LG+G++ +PERV+ + V+CG HT +S TW +G
Sbjct: 1160 ----------LGLGTVCNRKTPERVKA-LENYHIGHVACGLNHTVCVSADGSTTWAFG-- 1206
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
DG G+LG GN P + +K +V+CG + AL
Sbjct: 1207 ------DG--DYGKLGLGNTSAKSTPVKIEALSGLKVKKVACGTQFSVAL 1248
>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
Length = 1031
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 151/346 (43%), Gaps = 57/346 (16%)
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
E P C F +++ + CG HT+F+ + G VY G ND GQLG ++ +P
Sbjct: 4 EVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKS---RKKPD 60
Query: 117 RISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
++ L + +V +S G H+ A+ G+++ WG ++GQ+GL A I +P ++ L
Sbjct: 61 QVGALDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLS-VAEDYIRVPRNIKSLY 119
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
I Q A G S+A++ + SWG G+LG G E E PR IK L
Sbjct: 120 DIQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIK--------KESAPRHIKSL 171
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSN 295
G+ AAG HS +L G ++ WG N
Sbjct: 172 AGIPFAHIAAGGGHSF------------------------------ALTMSGAIFGWGRN 201
Query: 296 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 354
+ G LG+ +P ++ S+ + + CG HTAA++ EG + T+G GG
Sbjct: 202 KFGQLGLNDETDRSAPALLKSLRSQKII-HICCGEDHTAALTKEGGVFTFGAGGY----- 255
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
GQLGH + ++P V Q++CG HT A +
Sbjct: 256 -------GQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFV 294
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G V++ G GQ+
Sbjct: 43 GCNDLGQLGHD--KSRKKPDQVGALDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQI 100
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+S Y P I L ++VQ++ G+HHS A++ + ++Y WG+N GQLGLG +
Sbjct: 101 GLSVAEDYIRVPRNIKSLYDIQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIK 160
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L+GI A G S A+T G + WG G+LG E
Sbjct: 161 KE-SAPRHIKSLAGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDE-------- 211
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T P L+K L K+ G H+A + + G V+ FG ++ NH P
Sbjct: 212 -TDRSAPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPR 270
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT A S G+
Sbjct: 271 KVF--EL------------MGSI-----------------VTQIACGRQHTLAFVPSSGR 299
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 300 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 325
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLGS ++ P + +A GG H+ LT +G ++ G N FG
Sbjct: 145 WGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFG 204
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ S L S ++++ I G H++A+T +G ++ +G GQLG
Sbjct: 205 QLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTN 264
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
+V P KV L G Q A G + ++A V G++ S+G GG+G+LG G S+
Sbjct: 265 HEV--NPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTSN 318
>gi|222619882|gb|EEE56014.1| hypothetical protein OsJ_04782 [Oryza sativa Japonica Group]
Length = 1093
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 163/374 (43%), Gaps = 72/374 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + + +++ +ACG HT +T +G +Y G F
Sbjct: 335 WGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 394
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P R+ G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 395 GLLGHGNDVSHWV-PKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 453
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+A+ + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 454 DRAS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + S + P + L F AC
Sbjct: 512 GRLGHGDKDS---------RFVPTCVAAL-------VEPNFCQVAC-------------- 541
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
H +L + G +YT GS G LG D L P RV+G ++ V+++
Sbjct: 542 ---------GHCLTVALTTSGHVYTMGSAVYGQLGNPQADGL-LPVRVEGKLHKNFVEEI 591
Query: 327 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 385
SCG H A + S ++ TWG G + G+LGHG D PT+V ++ +
Sbjct: 592 SCGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGGTDDKNTPTLVEALKDKQ 639
Query: 386 ALQVSCGFNHTGAL 399
V CG N T A+
Sbjct: 640 VRSVVCGINFTAAI 653
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 123/302 (40%), Gaps = 71/302 (23%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL + ++ +V IS G H++ +T GE+Y WG+ S G+LG G + P ++
Sbjct: 303 KPLEFA-VRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VAQPKLIDS 359
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ + + A G + AVT G + +WG G G LGHG + S + P+
Sbjct: 360 LAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGND---------VSHWVPKR 410
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
+ LEG+ V + G H+A + G+++ FGD +
Sbjct: 411 VDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSF----------------------- 447
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------------ 338
G LG G L P V+ V + +CG HTAA+ E
Sbjct: 448 -------GVLGHGDRASLSVPREVESLKGLRTV-RAACGVWHTAAVVEVMVGNSSSSNCS 499
Query: 339 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
GKI TWG G G+LGHG+ PT V QV+CG T
Sbjct: 500 SGKIFTWGDGDK------------GRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTV 547
Query: 398 AL 399
AL
Sbjct: 548 AL 549
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 104/239 (43%), Gaps = 52/239 (21%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + + G + VT G++ SWG GRLGHG + +
Sbjct: 301 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVA-------- 352
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
P+LI L + +++ A G H+ + +G +Y +GD
Sbjct: 353 -QPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGD---------------------- 389
Query: 287 GELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTW 344
G+ + G LG G+ DV H P+RV GP V +SCG HTA + S G++ T+
Sbjct: 390 ------GTFKFGLLGHGN-DVSHWVPKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTF 442
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
G G S G LGHG+ P V + ++ ++ +CG HT A++E +
Sbjct: 443 GDG------------SFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVM 489
>gi|74204005|dbj|BAE29004.1| unnamed protein product [Mus musculus]
Length = 926
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 125/244 (51%), Gaps = 8/244 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ +G+LG +S RP A + ++CG H++ + G V+A G GQL
Sbjct: 47 GDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQL 106
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ DG ++ WG+NS GQLGLGK +
Sbjct: 107 GIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKN-S 165
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ IP KV+ L GI Q A G S A++ G WG+ SG+L ++ G
Sbjct: 166 RSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQL------ALSGNKV 219
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + E G+V+ FG + ++ + R P
Sbjct: 220 KEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQ 279
Query: 283 LISG 286
LI G
Sbjct: 280 LIEG 283
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 147/327 (44%), Gaps = 59/327 (18%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
A G H+L L VY+ G N +GQLG + + P I L V +S G HS
Sbjct: 28 ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQS-TERPEPIQALNDLHVDLVSCGKEHS 86
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ G+++ WG S GQLG+G + ++ +PTK++ L+GI Q + G S+A++
Sbjct: 87 VAVCHKGKVFAWGAGSEGQLGIG-EFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSED 145
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V SWG G+LG G+ S S+ P+ +K LEG+ + AAG
Sbjct: 146 GHVFSWGRNSEGQLGLGK--------NSRSQAIPQKVKSLEGIPLAQVAAG--------- 188
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDV---LHSPE 312
G H+ SL G + WGSN +G L + V ++ P
Sbjct: 189 -------------------GTHSFALSLT--GTSFGWGSNRSGQLALSGNKVKEQIYKPH 227
Query: 313 RVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+ G V +SCG++HTA ++ EG++ T+G G S G S GQ G
Sbjct: 228 SI-GALKNLSVIYISCGYEHTAVLTEEGQVFTFG-GNSSGQLQPSPRS--GQRG------ 277
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P ++ G + Q+ C HT A
Sbjct: 278 ---PQLIE-GIGGRVSQIECASYHTIA 300
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 124/282 (43%), Gaps = 56/282 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HHS + + +Y G NS GQLG + + P P ++ L+ + +
Sbjct: 23 ELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEP--IQALNDLHVDLVS 80
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E SVAV GKV +WGAG G+LG G+ I + P IK L G+K+
Sbjct: 81 CGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEI--------SFMPTKIKALAGIKIIQV 132
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G HS + E+G V ++WG N G LG+G
Sbjct: 133 SCGHYHSLALSEDGHV------------------------------FSWGRNSEGQLGLG 162
Query: 304 SIDVLHS-PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
+ P++V+ P+ QV+ G H+ A+S ++GWG + G
Sbjct: 163 KNSRSQAIPQKVKS-LEGIPLAQVAAGGTHSFALSLTGT-SFGWGSNR----------SG 210
Query: 363 QLG-HGNDV--DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QL GN V P + +N+ + +SCG+ HT L E
Sbjct: 211 QLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTE 252
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G E + P A + ++CG H+L L+E G V++ G N G
Sbjct: 98 WGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEG 157
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ +N P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 158 QLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + I P + L + + G+E + +T G+V ++G SG+L S G
Sbjct: 218 KVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 277
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+LI+ + G +I A + A + G+V G
Sbjct: 278 ---------PQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 312
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 84/197 (42%), Gaps = 39/197 (19%)
Query: 229 PRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG- 286
PR +K G+++ AA+G HS + N RVY GD + ++ + RP I
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71
Query: 287 ---------------------GELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVD 324
G+++ WG+ G LGIG ++ P +++ + +
Sbjct: 72 NDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKA-LAGIKII 130
Query: 325 QVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG-NDVDYIHPTIVNFGE 382
QVSCG H+ A+SE G + +W G +S GQLG G N P V E
Sbjct: 131 QVSCGHYHSLALSEDGHVFSW------------GRNSEGQLGLGKNSRSQAIPQKVKSLE 178
Query: 383 NVKALQVSCGFNHTGAL 399
+ QV+ G H+ AL
Sbjct: 179 GIPLAQVAAGGTHSFAL 195
>gi|391347040|ref|XP_003747773.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Metaseiulus occidentalis]
Length = 523
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 159/361 (44%), Gaps = 56/361 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+ DYG+LG G ++ P A + +ACG +HTL T+ VYA G+N Q
Sbjct: 66 FGSNDYGQLGHGHTKALVNPRCVKALKDKRAILVACGRSHTLVATDDKKVYAFGINSEHQ 125
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + Y +P ++ L +V ++ G HS A++ G +Y+WG + +GQLGLG+K
Sbjct: 126 LGVKSSAAYHADPQLVATLNGVQVKALTAGADHSLALSAKGIVYLWGSSEHGQLGLGRKK 185
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P+ K E + + G S V G + ++G G+LG L
Sbjct: 186 QRKLPVQLKTEGKAIAISA----GAYHSAYVNTDGVLYTFGETEHGKLGTN--------L 233
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARR 280
P + +++G+ +A G H+ + +GR Y FGD + ++ L Q HA R
Sbjct: 234 APKKCRKPSKVPDIQGLVTSVACGGS-HTVALTCDGRAYSFGDGSQGQLGLGQRVTHAGR 292
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
P LI P V+ + +VS G HTA +SEG+
Sbjct: 293 PHLI------------------------QMPTGVK-------MARVSAGQSHTAFLSEGR 321
Query: 341 ILTWGWGGSHGTFS-EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ G HG + EDG + P +V+ + QVSCG HT L
Sbjct: 322 QMYTCGEGRHGKLALEDGEMGSNKFS---------PMLVDILSLFQVQQVSCGGCHTLVL 372
Query: 400 L 400
+
Sbjct: 373 V 373
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 132/305 (43%), Gaps = 57/305 (18%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA-- 182
V+ ++ G HS IT G + +G N GQLG G A V P C+ + K+A
Sbjct: 44 VISVACGDQHSVFITASGRTFSFGSNDYGQLGHGHTKALVNP-----RCVKALKDKRAIL 98
Query: 183 -ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY--TPRLIKELEGVK 239
A G ++ T KV ++G +LG ++S++ Y P+L+ L GV+
Sbjct: 99 VACGRSHTLVATDDKKVYAFGINSEHQLG----------VKSSAAYHADPQLVATLNGVQ 148
Query: 240 VKIAAAGFLHSACIDENGRVYI----------FGDRAVDKMLFQEGNHARRPSLISG--- 286
VK AG HS + G VY+ G + K+ Q + ++ +G
Sbjct: 149 VKALTAGADHSLALSAKGIVYLWGSSEHGQLGLGRKKQRKLPVQLKTEGKAIAISAGAYH 208
Query: 287 -------GELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS- 337
G LYT+G E+G LG + P +V P + V V+CG HT A++
Sbjct: 209 SAYVNTDGVLYTFGETEHGKLGTNLAPKKCRKPSKV--PDIQGLVTSVACGGSHTVALTC 266
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI-HPTIVNFGENVKALQVSCGFNHT 396
+G+ ++G G S GQLG G V + P ++ VK +VS G +HT
Sbjct: 267 DGRAYSFGDG------------SQGQLGLGQRVTHAGRPHLIQMPTGVKMARVSAGQSHT 314
Query: 397 GALLE 401
L E
Sbjct: 315 AFLSE 319
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 110/227 (48%), Gaps = 9/227 (3%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWG+ ++G+LGLG + R PV K A++ G H+ ++ G +Y G + G
Sbjct: 170 LWGSSEHGQLGLGRKKQRKLPVQLKTEGK--AIAISAGAYHSAYVNTDGVLYTFGETEHG 227
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + +P ++ ++ V ++ G H+ A+T DG Y +G S GQLGLG++
Sbjct: 228 KLGTNLAPKKCRKPSKVPDIQGLVTSVACGGSHTVALTCDGRAYSFGDGSQGQLGLGQRV 287
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P ++ +G+ + + G + ++ G ++ + G G G+L E +G
Sbjct: 288 THA-GRPHLIQMPTGVKMARVSAGQSHTAFLSEGRQMYTCGEGRHGKL--ALEDGEMG-- 342
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
+++++P L+ L +V+ + G H+ + G G+R D
Sbjct: 343 --SNKFSPMLVDILSLFQVQQVSCGGCHTLVLVVPGLTDPQGNRMGD 387
>gi|426258035|ref|XP_004022625.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Ovis
aries]
Length = 1137
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 173/387 (44%), Gaps = 61/387 (15%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K+DI + G I++ + F ++G+ ++G+LGLGS + +P A +
Sbjct: 54 SKFWFKKDIPISLSCGDEHTAITTGNNKLF--MFGSNNWGQLGLGSKATVNKPTCIKALK 111
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI---SENIGYSLEPLRISGLKKEVV 126
+K +ACG HTL LT G VYATG N+ GQLG+ E + L S K +
Sbjct: 112 PEKVKFVACGRNHTLVLTGGGKVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHK--IK 169
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
Q+S G + S+A+T DGEL+MWG NS GQ+GL +P V G + G+
Sbjct: 170 QLSAGSNTSAALTEDGELFMWGDNSEGQIGLQNITNMCVPHQVTV----GKPISWISCGY 225
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S VT G++ ++G SG+LG L + P+L+ + +++A G
Sbjct: 226 YHSAFVTTEGELYTFGEPESGKLG-------LPPKLLVNHKVPQLVPGISEKVIQVACGG 278
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSID 306
G + ++AV YT+G + G LG+G+
Sbjct: 279 ----------GHTVVLTEKAV----------------------YTFGLGQFGQLGLGTFT 306
Query: 307 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGH 366
S +V + + V CG HTA I+E +L G HG LG
Sbjct: 307 FETSEPKVIESVKDKKISHVCCGENHTALITESGLLYTFGDGRHGKLG---------LGM 357
Query: 367 GNDVDYIHPTIV-NFGENVKALQVSCG 392
N + PT+ NF + + L V+CG
Sbjct: 358 ENFANQFLPTLCSNFLKYIVHL-VACG 383
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 157/344 (45%), Gaps = 67/344 (19%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
+ ++G V+ FG+ +ENI P + K + +S G H++ T + +L+
Sbjct: 34 IEDSGAVFT-----FGKTKFAENI-----PSKFWFKKDIPISLSCGDEHTAITTGNNKLF 83
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
M+G N+ GQLGLG KA + PT ++ L K A G ++ +TGGGKV + G
Sbjct: 84 MFGSNNWGQLGLGSKA--TVNKPTCIKALKPEKVKFVACGRNHTLVLTGGGKVYATGGNN 141
Query: 206 SGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
G+LG G ++ F TS++ K+K +AG SA + E+G ++
Sbjct: 142 EGQLGLGDTDERSAFHLISFF--TSQH-----------KIKQLSAGSNTSAALTEDGELF 188
Query: 261 IFGDRAVDKMLFQEGNHARRPSLIS--------------------GGELYTWGSNENGCL 300
++GD + ++ Q + P ++ GELYT+G E+G L
Sbjct: 189 MWGDNSEGQIGLQNITNMCVPHQVTVGKPISWISCGYYHSAFVTTEGELYTFGEPESGKL 248
Query: 301 GIG-SIDVLHS-PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGH 358
G+ + V H P+ V G SE V QV+CG HT ++E + T+G G
Sbjct: 249 GLPPKLLVNHKVPQLVPG-ISEK-VIQVACGGGHTVVLTEKAVYTFGLG----------- 295
Query: 359 SSGGQLGHGN-DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GQLG G + P ++ ++ K V CG NHT + E
Sbjct: 296 -QFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALITE 338
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 14/69 (20%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G+G +G+LGLG + +++ P +CS F K+ + +ACGG H L V+AT
Sbjct: 345 FGDGRHGKLGLGMENFANQFLPTLCSNFLKYIVHLVACGGCHML-------VFAT----- 392
Query: 101 GQLGISENI 109
+LG++E+I
Sbjct: 393 PRLGMAEDI 401
>gi|60097906|ref|NP_080268.1| E3 ISG15--protein ligase Herc6 [Mus musculus]
gi|403399416|sp|F2Z461.1|HERC6_MOUSE RecName: Full=E3 ISG15--protein ligase Herc6
Length = 1003
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 125/244 (51%), Gaps = 8/244 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ +G+LG +S RP A + ++CG H++ + G V+A G GQL
Sbjct: 47 GDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQL 106
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ DG ++ WG+NS GQLGLGK +
Sbjct: 107 GIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKN-S 165
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ IP KV+ L GI Q A G S A++ G WG+ SG+L ++ G
Sbjct: 166 RSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQL------ALSGNKV 219
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + E G+V+ FG + ++ + R P
Sbjct: 220 KEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQ 279
Query: 283 LISG 286
LI G
Sbjct: 280 LIEG 283
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 147/327 (44%), Gaps = 59/327 (18%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
A G H+L L VY+ G N +GQLG + + P I L V +S G HS
Sbjct: 28 ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQS-TERPEPIQALNDLHVDLVSCGKEHS 86
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ G+++ WG S GQLG+G + ++ +PTK++ L+GI Q + G S+A++
Sbjct: 87 VAVCHKGKVFAWGAGSEGQLGIG-EFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSED 145
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V SWG G+LG G+ S S+ P+ +K LEG+ + AAG
Sbjct: 146 GHVFSWGRNSEGQLGLGKNSR--------SQAIPQKVKSLEGIPLAQVAAG--------- 188
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDV---LHSPE 312
G H+ SL G + WGSN +G L + V ++ P
Sbjct: 189 -------------------GTHSFALSLT--GTSFGWGSNRSGQLALSGNKVKEQIYKPH 227
Query: 313 RVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+ G V +SCG++HTA ++ EG++ T+G G S G S GQ G
Sbjct: 228 SI-GALKNLSVIYISCGYEHTAVLTEEGQVFTFG-GNSSGQLQPSPRS--GQRG------ 277
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P ++ G + Q+ C HT A
Sbjct: 278 ---PQLIE-GIGGRVSQIECASYHTIA 300
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 124/282 (43%), Gaps = 56/282 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HHS + + +Y G NS GQLG + + P P ++ L+ + +
Sbjct: 23 ELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEP--IQALNDLHVDLVS 80
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E SVAV GKV +WGAG G+LG G+ I + P IK L G+K+
Sbjct: 81 CGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEI--------SFMPTKIKALAGIKIIQV 132
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G HS + E+G V ++WG N G LG+G
Sbjct: 133 SCGHYHSLALSEDGHV------------------------------FSWGRNSEGQLGLG 162
Query: 304 SIDVLHS-PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
+ P++V+ P+ QV+ G H+ A+S ++GWG + G
Sbjct: 163 KNSRSQAIPQKVKS-LEGIPLAQVAAGGTHSFALSLTGT-SFGWGSNR----------SG 210
Query: 363 QLG-HGNDV--DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QL GN V P + +N+ + +SCG+ HT L E
Sbjct: 211 QLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTE 252
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G E + P A + ++CG H+L L+E G V++ G N G
Sbjct: 98 WGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEG 157
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ +N P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 158 QLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + I P + L + + G+E + +T G+V ++G SG+L S G
Sbjct: 218 KVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 277
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+LI+ + G +I A + A + G+V G
Sbjct: 278 ---------PQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 312
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 84/197 (42%), Gaps = 39/197 (19%)
Query: 229 PRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG- 286
PR +K G+++ AA+G HS + N RVY GD + ++ + RP I
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71
Query: 287 ---------------------GELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVD 324
G+++ WG+ G LGIG ++ P +++ + +
Sbjct: 72 NDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKA-LAGIKII 130
Query: 325 QVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG-NDVDYIHPTIVNFGE 382
QVSCG H+ A+SE G + +W G +S GQLG G N P V E
Sbjct: 131 QVSCGHYHSLALSEDGHVFSW------------GRNSEGQLGLGKNSRSQAIPQKVKSLE 178
Query: 383 NVKALQVSCGFNHTGAL 399
+ QV+ G H+ AL
Sbjct: 179 GIPLAQVAAGGTHSFAL 195
>gi|326522674|dbj|BAJ88383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 164/374 (43%), Gaps = 72/374 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + A +++ +ACG HT +T +G +Y G +F
Sbjct: 335 WGEESGGRLGHGVDCDVPQPKLIDALAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNF 394
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G G + + + P R++G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 395 GLSGHGNEVSHWM-PKRLNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHG 453
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + I +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 454 DRQS--ISVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L F AC
Sbjct: 512 GRLGHGDKETRL---------VPTCVASL-------VEPNFCQVAC-------------- 541
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
H +L + G +YT GS+ G LG D + P RV+G ++ V+++
Sbjct: 542 ---------GHCFTVALTTSGHVYTMGSSVYGQLGNPQADGM-VPARVEGKLHKNFVEEI 591
Query: 327 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 385
SCG H A + S ++ TWG G + G+LGHG+ D PT+V ++ +
Sbjct: 592 SCGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRNSPTLVEALKDKQ 639
Query: 386 ALQVSCGFNHTGAL 399
V CG N T A+
Sbjct: 640 VRSVVCGINFTAAI 653
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 120/304 (39%), Gaps = 68/304 (22%)
Query: 142 GELYMWGKNS--------NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G++++WG+ + N +LG A +P +E + + + G + VT
Sbjct: 268 GDVFIWGEGTGEGILGGGNSRLGSSSGAKMDCLVPKPLEFAGRLDVQNISCGGRHATLVT 327
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG GRLGHG + + P+LI L + +++ A G H+ +
Sbjct: 328 KQGEVYSWGEESGGRLGHGVDCDVP---------QPKLIDALAHMNIELVACGEYHTCAV 378
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLISG-----------------------GE 288
+G +Y +G+ + L GN P ++G G+
Sbjct: 379 TLSGDLYTWGNGTFNFGLSGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHTAVVTSAGQ 438
Query: 289 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE---------- 338
L+T+G G LG G + P V+ V + +CG HTAA+ E
Sbjct: 439 LFTFGDGSFGVLGHGDRQSISVPREVESLKGLRTV-RAACGVWHTAAVVEVMVGNSSSSN 497
Query: 339 ---GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
GKI TWG G G+LGHG+ + PT V QV+CG
Sbjct: 498 CSSGKIFTWGDGDK------------GRLGHGDKETRLVPTCVASLVEPNFCQVACGHCF 545
Query: 396 TGAL 399
T AL
Sbjct: 546 TVAL 549
>gi|297598338|ref|NP_001045419.2| Os01g0952300 [Oryza sativa Japonica Group]
gi|255674079|dbj|BAF07333.2| Os01g0952300 [Oryza sativa Japonica Group]
Length = 1133
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 163/374 (43%), Gaps = 72/374 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + + +++ +ACG HT +T +G +Y G F
Sbjct: 335 WGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 394
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P R+ G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 395 GLLGHGNDVSHWV-PKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 453
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+A+ + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 454 DRAS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + S + P + L F AC
Sbjct: 512 GRLGHGDKDS---------RFVPTCVAAL-------VEPNFCQVAC-------------- 541
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
H +L + G +YT GS G LG D L P RV+G ++ V+++
Sbjct: 542 ---------GHCLTVALTTSGHVYTMGSAVYGQLGNPQADGL-LPVRVEGKLHKNFVEEI 591
Query: 327 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 385
SCG H A + S ++ TWG G + G+LGHG D PT+V ++ +
Sbjct: 592 SCGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGGTDDKNTPTLVEALKDKQ 639
Query: 386 ALQVSCGFNHTGAL 399
V CG N T A+
Sbjct: 640 VRSVVCGINFTAAI 653
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 123/302 (40%), Gaps = 71/302 (23%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL + ++ +V IS G H++ +T GE+Y WG+ S G+LG G + P ++
Sbjct: 303 KPLEFA-VRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VAQPKLIDS 359
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ + + A G + AVT G + +WG G G LGHG + S + P+
Sbjct: 360 LAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGND---------VSHWVPKR 410
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
+ LEG+ V + G H+A + G+++ FGD +
Sbjct: 411 VDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSF----------------------- 447
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------------ 338
G LG G L P V+ V + +CG HTAA+ E
Sbjct: 448 -------GVLGHGDRASLSVPREVESLKGLRTV-RAACGVWHTAAVVEVMVGNSSSSNCS 499
Query: 339 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
GKI TWG G G+LGHG+ PT V QV+CG T
Sbjct: 500 SGKIFTWGDGDK------------GRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTV 547
Query: 398 AL 399
AL
Sbjct: 548 AL 549
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 104/239 (43%), Gaps = 52/239 (21%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + + G + VT G++ SWG GRLGHG + +
Sbjct: 301 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVA-------- 352
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
P+LI L + +++ A G H+ + +G +Y +GD
Sbjct: 353 -QPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGD---------------------- 389
Query: 287 GELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTW 344
G+ + G LG G+ DV H P+RV GP V +SCG HTA + S G++ T+
Sbjct: 390 ------GTFKFGLLGHGN-DVSHWVPKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTF 442
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
G G S G LGHG+ P V + ++ ++ +CG HT A++E +
Sbjct: 443 GDG------------SFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVM 489
>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
Length = 1031
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 144/309 (46%), Gaps = 42/309 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG L+ +P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 59 GDNSRGQLGRRGLQREEQPKPIQALETLRVELVSCGKEHSLAVCYKGRVFAWGAGSEGQL 118
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E +L P +I L +++Q+S G +HS A++ DG+++ WG NS+GQLGLGK+
Sbjct: 119 GIGEFKEINLIPQKIKTLTGIKIIQVSCGNYHSLALSEDGQVFSWGSNSHGQLGLGKELP 178
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L + G
Sbjct: 179 SQAS-PQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQL------AFFGSNV 231
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y PR + L+ + V + G H+A + +NG+V+ FGD
Sbjct: 232 PVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNGKVFTFGD------------------ 273
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGK 340
N G LG P+ ++G E V Q+ CG HT A + G+
Sbjct: 274 ------------NSCGQLGHSPTAEKTGPQLMEG--IEGLVSQIDCGSYHTLAYVYTTGQ 319
Query: 341 ILTWGWGGS 349
++++G G S
Sbjct: 320 VVSFGRGPS 328
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 153/335 (45%), Gaps = 67/335 (20%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
L+ A G H+L L G V++ G N GQLG + +P I L+ V+ +S G
Sbjct: 36 LRQAASGERHSLLLLSDGAVHSCGDNSRGQLG-RRGLQREEQPKPIQALETLRVELVSCG 94
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+ G ++ WG S GQLG+G + ++ IP K++ L+GI Q + G S+A
Sbjct: 95 KEHSLAVCYKGRVFAWGAGSEGQLGIG-EFKEINLIPQKIKTLTGIKIIQVSCGNYHSLA 153
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ G+V SWG+ G+LG G+E S+ +P+ ++ L+G+ + AAG HS
Sbjct: 154 LSEDGQVFSWGSNSHGQLGLGKELP--------SQASPQRVRSLDGIPLAQVAAGGAHSF 205
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSP 311
+L G + WGSN G L +V P
Sbjct: 206 ------------------------------ALSLSGTSFGWGSNNAGQLAFFGSNV---P 232
Query: 312 ERVQGPFSESP-----VDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 365
+ P S S V +SCG +HTA +++ GK+ T+ G +S GQLG
Sbjct: 233 VQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNGKVFTF------------GDNSCGQLG 280
Query: 366 HGNDVDYIHPTIVNFGENVKAL--QVSCGFNHTGA 398
H + P ++ E ++ L Q+ CG HT A
Sbjct: 281 HSPTAEKTGPQLM---EGIEGLVSQIDCGSYHTLA 312
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 126/282 (44%), Gaps = 56/282 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E+ Q ++G HS + DG ++ G NS GQLG ++ + P ++ L + + +
Sbjct: 35 ELRQAASGERHSLLLLSDGAVHSCGDNSRGQLG--RRGLQREEQPKPIQALETLRVELVS 92
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I P+ IK L G+K+
Sbjct: 93 CGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEI--------NLIPQKIKTLTGIKIIQV 144
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G HS + E+G+V+ +WGSN +G LG+G
Sbjct: 145 SCGNYHSLALSEDGQVF------------------------------SWGSNSHGQLGLG 174
Query: 304 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
+ SP+RV+ P+ QV+ G H+ A+S ++GWG ++ G
Sbjct: 175 KELPSQASPQRVRS-LDGIPLAQVAAGGAHSFALSLSGT-SFGWGSNNA----------G 222
Query: 363 QL---GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QL G V P V+ + + + +SCG HT L +
Sbjct: 223 QLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQ 264
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 107/231 (46%), Gaps = 16/231 (6%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E P + ++CG H+L L+E G V++
Sbjct: 106 RVFA--WGAGSEGQLGIGEFKEINLIPQKIKTLTGIKIIQVSCGNYHSLALSEDGQVFSW 163
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + + P R+ L + Q++ G HS A+++ G + WG N+ GQ
Sbjct: 164 GSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQ 223
Query: 155 LG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L G P V L + + G E + +T GKV ++G G+LGH
Sbjct: 224 LAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHS- 282
Query: 214 ESSILGFLRSTSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
T+E T P+L++ +EG+ +I + A + G+V FG
Sbjct: 283 ---------PTAEKTGPQLMEGIEGLVSQIDCGSYHTLAYVYTTGQVVSFG 324
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ +G+LGLG L S+ P + + L +A GGAH+ L+ +G + G N+ G
Sbjct: 163 WGSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAG 222
Query: 102 QLGI--SENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL S S +P +S LK VV IS G+ H++ +T +G+++ +G NS GQLG
Sbjct: 223 QLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHS 282
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
A K P +E + G+ ++ + V G+V+S+G G S +
Sbjct: 283 PTAEKT--GPQLMEGIEGLVSQIDCGSYHTLAYVYTTGQVVSFGRGPSCK 330
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 38/188 (20%)
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG---------- 286
G +++ AA+G HS + +G V+ GD + ++ + +P I
Sbjct: 33 GPELRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVELVS 92
Query: 287 ------------GELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHT 333
G ++ WG+ G LGIG ++ P++++ + + QVSCG H+
Sbjct: 93 CGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKT-LTGIKIIQVSCGNYHS 151
Query: 334 AAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 391
A+SE G++ +W G +S GQLG G ++ P V + + QV+
Sbjct: 152 LALSEDGQVFSW------------GSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAA 199
Query: 392 GFNHTGAL 399
G H+ AL
Sbjct: 200 GGAHSFAL 207
>gi|218189748|gb|EEC72175.1| hypothetical protein OsI_05225 [Oryza sativa Indica Group]
Length = 1093
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 163/374 (43%), Gaps = 72/374 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + + +++ +ACG HT +T +G +Y G F
Sbjct: 335 WGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 394
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P R+ G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 395 GLLGHGNDVSHWV-PKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 453
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+A+ + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 454 DRAS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + S + P + L F AC
Sbjct: 512 GRLGHGDKDS---------RFVPTCVAAL-------VEPNFCQVAC-------------- 541
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
H +L + G +YT GS G LG D L P RV+G ++ V+++
Sbjct: 542 ---------GHCLTVALTTSGHVYTMGSAVYGQLGNPQADGL-LPVRVEGKLHKNFVEEI 591
Query: 327 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 385
SCG H A + S ++ TWG G + G+LGHG D PT+V ++ +
Sbjct: 592 SCGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGGTDDKNTPTLVEALKDKQ 639
Query: 386 ALQVSCGFNHTGAL 399
V CG N T A+
Sbjct: 640 VRSVVCGINFTAAI 653
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 123/302 (40%), Gaps = 71/302 (23%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL + ++ +V IS G H++ +T GE+Y WG+ S G+LG G + P ++
Sbjct: 303 KPLEFA-VRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VAQPKLIDS 359
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ + + A G + AVT G + +WG G G LGHG + S + P+
Sbjct: 360 LAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGND---------VSHWVPKR 410
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
+ LEG+ V + G H+A + G+++ FGD +
Sbjct: 411 VDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSF----------------------- 447
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------------ 338
G LG G L P V+ V + +CG HTAA+ E
Sbjct: 448 -------GVLGHGDRASLSVPREVESLKGLRTV-RAACGVWHTAAVVEVMVGNSSSSNCS 499
Query: 339 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
GKI TWG G G+LGHG+ PT V QV+CG T
Sbjct: 500 SGKIFTWGDGDK------------GRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTV 547
Query: 398 AL 399
AL
Sbjct: 548 AL 549
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 104/239 (43%), Gaps = 52/239 (21%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + + G + VT G++ SWG GRLGHG + +
Sbjct: 301 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVA-------- 352
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
P+LI L + +++ A G H+ + +G +Y +GD
Sbjct: 353 -QPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGD---------------------- 389
Query: 287 GELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTW 344
G+ + G LG G+ DV H P+RV GP V +SCG HTA + S G++ T+
Sbjct: 390 ------GTFKFGLLGHGN-DVSHWVPKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTF 442
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
G G S G LGHG+ P V + ++ ++ +CG HT A++E +
Sbjct: 443 GDG------------SFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVM 489
>gi|57899942|dbj|BAD87854.1| putative ZR1 protein [Oryza sativa Japonica Group]
Length = 1091
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 163/374 (43%), Gaps = 72/374 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + + +++ +ACG HT +T +G +Y G F
Sbjct: 335 WGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 394
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P R+ G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 395 GLLGHGNDVSHWV-PKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 453
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+A+ + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 454 DRAS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + S + P + L F AC
Sbjct: 512 GRLGHGDKDS---------RFVPTCVAAL-------VEPNFCQVAC-------------- 541
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
H +L + G +YT GS G LG D L P RV+G ++ V+++
Sbjct: 542 ---------GHCLTVALTTSGHVYTMGSAVYGQLGNPQADGL-LPVRVEGKLHKNFVEEI 591
Query: 327 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 385
SCG H A + S ++ TWG G + G+LGHG D PT+V ++ +
Sbjct: 592 SCGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGGTDDKNTPTLVEALKDKQ 639
Query: 386 ALQVSCGFNHTGAL 399
V CG N T A+
Sbjct: 640 VRSVVCGINFTAAI 653
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 123/302 (40%), Gaps = 71/302 (23%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL + ++ +V IS G H++ +T GE+Y WG+ S G+LG G + P ++
Sbjct: 303 KPLEFA-VRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VAQPKLIDS 359
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ + + A G + AVT G + +WG G G LGHG + S + P+
Sbjct: 360 LAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGND---------VSHWVPKR 410
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
+ LEG+ V + G H+A + G+++ FGD +
Sbjct: 411 VDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSF----------------------- 447
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------------ 338
G LG G L P V+ V + +CG HTAA+ E
Sbjct: 448 -------GVLGHGDRASLSVPREVESLKGLRTV-RAACGVWHTAAVVEVMVGNSSSSNCS 499
Query: 339 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
GKI TWG G G+LGHG+ PT V QV+CG T
Sbjct: 500 SGKIFTWGDGDK------------GRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTV 547
Query: 398 AL 399
AL
Sbjct: 548 AL 549
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 104/239 (43%), Gaps = 52/239 (21%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + + G + VT G++ SWG GRLGHG + +
Sbjct: 301 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVA-------- 352
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
P+LI L + +++ A G H+ + +G +Y +GD
Sbjct: 353 -QPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGD---------------------- 389
Query: 287 GELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTW 344
G+ + G LG G+ DV H P+RV GP V +SCG HTA + S G++ T+
Sbjct: 390 ------GTFKFGLLGHGN-DVSHWVPKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTF 442
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
G G S G LGHG+ P V + ++ ++ +CG HT A++E +
Sbjct: 443 GDG------------SFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVM 489
>gi|282722852|gb|ADA84472.1| retinitis pigmentosa GTPase regulator protein 2 ORF15 [Danio rerio]
Length = 1413
Score = 119 bits (297), Expect = 4e-24, Method: Composition-based stats.
Identities = 104/389 (26%), Positives = 167/389 (42%), Gaps = 55/389 (14%)
Query: 8 AMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSA 67
A +K++LK D+ L G + + + F ++G+ ++G+LGLG+ + +P A
Sbjct: 27 APSKFWLKNDVPLRISCGDEHTALVTENGKLF--MFGSNNWGQLGLGTKTTVNKPTCVKA 84
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVV 126
+K ACG HTL T G +YA G N+ GQLG+ + N S + + +
Sbjct: 85 LRSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIK 144
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
++ G + S+A+T DG LYM G NS GQ+GLGK++ + P V G + G+
Sbjct: 145 MLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSV----GKRVFWVSCGY 200
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S VT G + ++G SG+LG E + + P+ + ++ V++A G
Sbjct: 201 YHSAFVTVDGALYTFGEKDSGKLGLSTE-------KLANHKVPQQVTDIPDRVVQVACGG 253
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSID 306
H+ + EN E+Y++G + G LG G+
Sbjct: 254 G-HTVALTEN-------------------------------EVYSFGLGQFGQLGHGTFI 281
Query: 307 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGH 366
RV F + V +CG HTA I++ +L G HG LG
Sbjct: 282 FESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLG---------LGE 332
Query: 367 GNDVDYIHPTIVNFGENVKALQVSCGFNH 395
N + PT+ + V+CG H
Sbjct: 333 ENFTNQFKPTLCPRFLDYHVHSVTCGGCH 361
Score = 73.6 bits (179), Expect = 2e-10, Method: Composition-based stats.
Identities = 80/322 (24%), Positives = 135/322 (41%), Gaps = 75/322 (23%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
+ E+G V+ G + F S+ + PLRIS G H++ +T +G+L+
Sbjct: 9 IPESGAVFTFGKSKFADNAPSKFWLKNDVPLRIS----------CGDEHTALVTENGKLF 58
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
M+G N+ GQLGLG K + PT V+ L K A G ++ T G + + G
Sbjct: 59 MFGSNNWGQLGLGTKTT--VNKPTCVKALRSERVKLTACGRTHTLVFTSRGNLYACGGNN 116
Query: 206 SGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LG G + + + ++ P +K+ AAG SA + ++GR+Y+ G
Sbjct: 117 EGQLGLGDCNDRTSFHLVEFFNKQGP----------IKMLAAGSNTSAALTQDGRLYMRG 166
Query: 264 DRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
D + ++ + ++A P +S G+ W
Sbjct: 167 DNSEGQIGLGKESNALTPQEVSVGKRVFW------------------------------- 195
Query: 324 DQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT---IVN 379
VSCG+ H+A ++ +G + T+G G+LG + H + +
Sbjct: 196 --VSCGYYHSAFVTVDGALYTFG------------EKDSGKLGLSTEKLANHKVPQQVTD 241
Query: 380 FGENVKALQVSCGFNHTGALLE 401
+ V +QV+CG HT AL E
Sbjct: 242 IPDRV--VQVACGGGHTVALTE 261
>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
Length = 4253
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 171/366 (46%), Gaps = 70/366 (19%)
Query: 44 GNGDYGRLGLGSLES--RWRPVVCSAFEKHSLKALACGGA---HTLFLTETGCVYATGLN 98
G G YGRLG G+ + R RP+ +A + + LA H+L LTETG V++ G
Sbjct: 3462 GEGSYGRLGQGNSDDLPRLRPI--TALQGFVVTELATSTGLEGHSLALTETGEVFSWGDG 3519
Query: 99 DFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
D+G+LG N P +I L+ ++V+ ++ G+ HS+ +TVDG+L+ +G + G+LGL
Sbjct: 3520 DYGKLG-HGNSERQRRPRQIEALRGEDVLHVACGHKHSAIVTVDGKLFTFGASDLGRLGL 3578
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESS 216
G + K +P +V L I + A G +V VT + V ++G G G+LG G
Sbjct: 3579 GNTSNK--KLPAQVTALQPIMVELIACGANHTVVVTTDRESVWTFGEGEYGQLGLG---- 3632
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
R+T++ TP+ + + +K G + + + G+VY G
Sbjct: 3633 -----RTTAKMTPQYVDAFSKLNIKKICCGARFTLALTKEGKVYSCG------------- 3674
Query: 277 HARRPSLISGGELYTWGSNENGCLGIGSIDVLHS---PERVQGPFSESPVDQVSCGWKHT 333
N C GI +D H+ P++V SE ++ ++ G++H
Sbjct: 3675 -------------------HNRCNGIFEVDTQHADYYPQQVMA-LSEQFIEDIAAGYEHA 3714
Query: 334 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
A++ EG + W W G+ + GQLG G + P +++ + Q+S G
Sbjct: 3715 LALTKEGDV--WSW----------GNDTDGQLGLGQTLPQREPCLISSLQGKGIRQISAG 3762
Query: 393 FNHTGA 398
NH+ A
Sbjct: 3763 HNHSAA 3768
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 153/318 (48%), Gaps = 43/318 (13%)
Query: 46 GDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDFGQ 102
G+YGRLGLG ++ RP + + +K L HTL + G +Y+ G D+G+
Sbjct: 441 GNYGRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGDYGK 500
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ L + ++ +VV QI+ GY HS+AIT +G LY WG G+LG G
Sbjct: 501 LGHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGRLGHGDNH 560
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ IPT V+ ++G+ + F ++ V S+GAG +G+LGHG S +
Sbjct: 561 SR--SIPTLVKDITGVGSVSCGSSFTVVIS-QDATTVWSFGAGDNGKLGHGDTSRV---- 613
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD------------RAVDK 269
Y P++I L+G+ ++ S + G+V+++G V K
Sbjct: 614 -----YRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGPCLGYGQADATFLVPK 668
Query: 270 ML--FQE---------GNHARRPSLISGGELYTWGSNENGCLGIGSID-VLHSPERVQGP 317
L FQ+ NH +L ++Y+WG+N +G G+G+ + + P +V G
Sbjct: 669 RLDEFQDLQIIDIAVGDNHCL--ALTCDNDVYSWGNNASGQCGLGNNNSPVLLPRKVTG- 725
Query: 318 FSESPVDQVSCGWKHTAA 335
F + Q+S G H+ A
Sbjct: 726 FDNHVIYQISVGTSHSIA 743
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 125/246 (50%), Gaps = 13/246 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ E + RP A + +ACG H+ +T G ++ G +D G+
Sbjct: 3516 WGDGDYGKLGHGNSERQRRPRQIEALRGEDVLHVACGHKHSAIVTVDGKLFTFGASDLGR 3575
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
LG+ L P +++ L+ +V+ I+ G +H+ +T D E ++ +G+ GQLGLG+
Sbjct: 3576 LGLGNTSNKKL-PAQVTALQPIMVELIACGANHTVVVTTDRESVWTFGEGEYGQLGLGRT 3634
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK+ P V+ S + K+ G ++A+T GKV S GH + + I
Sbjct: 3635 TAKM--TPQYVDAFSKLNIKKICCGARFTLALTKEGKVYS--------CGHNRCNGIFEV 3684
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
++Y P+ + L ++ AAG+ H+ + + G V+ +G+ ++ + R
Sbjct: 3685 DTQHADYYPQQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTDGQLGLGQTLPQRE 3744
Query: 281 PSLISG 286
P LIS
Sbjct: 3745 PCLISS 3750
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 16/211 (7%)
Query: 34 TLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
T R +G G+YG+LGLG ++ P AF K ++K + CG TL LT+ G VY
Sbjct: 3612 TTDRESVWTFGEGEYGQLGLGRTTAKMTPQYVDAFSKLNIKKICCGARFTLALTKEGKVY 3671
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSN 152
+ G N + + P ++ L ++ ++ I+ GY H+ A+T +G+++ WG +++
Sbjct: 3672 SCGHNRCNGIFEVDTQHADYYPQQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTD 3731
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLGLG+ + P + L G +Q + G S A T A S R
Sbjct: 3732 GQLGLGQTLPQ--REPCLISSLQGKGIRQISAGHNHSAAWT--------VAPASIRKAMA 3781
Query: 213 QESSI-LGFLRSTSEYTPRLIKELEGVKVKI 242
SS+ LG E P + L G+ +++
Sbjct: 3782 TSSSLELGL----PERIPEIYGSLAGIDIQL 3808
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 120/290 (41%), Gaps = 56/290 (19%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L+P S K QI G++ + I DG + G+ S G+LG G + +P +
Sbjct: 3428 LQPTLTSSFSK-AKQIHCGHNSTFVIEHDGTVLACGEGSYGRLGQGN--SDDLPRLRPIT 3484
Query: 173 CLSGIFTKQAAL--GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
L G + A G E S+A+T G+V SWG G G+LGHG S + P
Sbjct: 3485 ALQGFVVTELATSTGLEGHSLALTETGEVFSWGDGDYGKLGHGN---------SERQRRP 3535
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
R I+ L G V A G HSA + VD G+L
Sbjct: 3536 RQIEALRGEDVLHVACGHKHSAIV------------TVD------------------GKL 3565
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 349
+T+G+++ G LG+G+ P +V V+ ++CG HT ++ + W +G
Sbjct: 3566 FTFGASDLGRLGLGNTSNKKLPAQVTA-LQPIMVELIACGANHTVVVTTDRESVWTFG-- 3622
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G + GQLG G + P V+ + ++ CG T AL
Sbjct: 3623 EGEY--------GQLGLGRTTAKMTPQYVDAFSKLNIKKICCGARFTLAL 3664
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 4/153 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G +RP V S + ++ + C +L LT G V+ G
Sbjct: 597 FGAGDNGKLGHGDTSRVYRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGPC-- 654
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + L P R+ + +++ I+ G +H A+T D ++Y WG N++GQ GLG
Sbjct: 655 LGYGQADATFLVPKRLDEFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQCGLGNNN 714
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ V+ +P KV Q ++G S+A T
Sbjct: 715 SPVL-LPRKVTGFDNHVIYQISVGTSHSIAWTA 746
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 9/214 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG+GDYGRLG G SR P + + +++CG + T+ +++ V++ G D G
Sbjct: 546 WGDGDYGRLGHGDNHSRSIPTLVKDIT--GVGSVSCGSSFTVVISQDATTVWSFGAGDNG 603
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + P IS L+ ++ ++ S A+T G++++WG S LG G+
Sbjct: 604 KLGHGDT-SRVYRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWG--SGPCLGYGQA 660
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + +P +++ + A+G +A+T V SWG SG+ G G +S +
Sbjct: 661 DATFL-VPKRLDEFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQCGLGNNNSPVLL 719
Query: 221 LRSTSEYTPRLIKELE-GVKVKIAAAGFLHSACI 253
R + + +I ++ G IA CI
Sbjct: 720 PRKVTGFDNHVIYQISVGTSHSIAWTALPTDRCI 753
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 108/289 (37%), Gaps = 82/289 (28%)
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIP--IPTKVECLSGIF-----------TKQAALGFE 187
+ +Y+WG NS+ QLG+ + +IP P+ G + + + FE
Sbjct: 404 ESHVYVWGSNSSYQLGISEPEKMLIPHLTPSFANSEQGNYGRLGLGDSSNQNRPKLIRFE 463
Query: 188 Q----------------SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
++A+ G++ SWG G G+LGHG ++ +P+L
Sbjct: 464 HECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGDYGKLGHGNH---------VTQKSPKL 514
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
I ++G V+ A G+ HSA I S G LY
Sbjct: 515 ILGPMQGKVVRQIAVGYRHSAAI------------------------------TSEGLLY 544
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSH 350
TWG + G LG G P V+ + V VSCG T IS+ W +G
Sbjct: 545 TWGDGDYGRLGHGDNHSRSIPTLVKDI---TGVGSVSCGSSFTVVISQDATTVWSFGA-- 599
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G+LGHG+ P +++ + + +V C + AL
Sbjct: 600 --------GDNGKLGHGDTSRVYRPKVISNLQGLLIRKVCCASQSSLAL 640
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 4/142 (2%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGIC--KRWISSTLQRRFAALWGNGDYGRLGLGSLESR 59
LGR+ MT Y+ KL K C + ++ T + + + N G + + +
Sbjct: 3631 LGRTTAKMTPQYVDAFSKLNIKKICCGARFTLALTKEGKVYSCGHNRCNGIFEVDTQHAD 3690
Query: 60 WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
+ P A + ++ +A G H L LT+ G V++ G + GQLG+ + + EP IS
Sbjct: 3691 YYPQQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTDGQLGLGQTLPQR-EPCLIS 3749
Query: 120 GLK-KEVVQISTGYHHSSAITV 140
L+ K + QIS G++HS+A TV
Sbjct: 3750 SLQGKGIRQISAGHNHSAAWTV 3771
>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
Length = 4817
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 132/253 (52%), Gaps = 23/253 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A ++ +ACGG+H+ + G +Y GL ++G+
Sbjct: 3026 WGEGDDGKLGHFSRMNCDKPRLIEALRSKRVRDIACGGSHSAAIISNGDLYTWGLGEYGR 3085
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L P + L+ + V+Q++ G + A+T G +Y WG G+LG G
Sbjct: 3086 LGHGDNT-TQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGTVYSWGDGDFGKLGRGG 3144
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+P P +E L+G+ Q G + S+A+T G+V +WG G RLGHG ++ +
Sbjct: 3145 SEGCSVPHP--IERLNGVGVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHV-- 3200
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P+L++ L+G KV A G LH + +NG+VY +GD Q+GN
Sbjct: 3201 -------RKPQLVETLKGKKVTHVAVGALHCLSVLDNGQVYAWGDNDHG----QQGNSTT 3249
Query: 279 ---RRPSLISGGE 288
R+P+L+ G E
Sbjct: 3250 TVNRKPALVQGLE 3262
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 131/305 (42%), Gaps = 44/305 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ RP + + +A GGAH+ +T TG +Y+ G +G+
Sbjct: 4047 WGEGEDGKLGHGNRSPCDRPRAIESLRGKEVVDIAAGGAHSACITSTGELYSWGKGRYGR 4106
Query: 103 LGISENIGYSLEPL--RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG ++ + L + G + V +G + IT D ++ WG G+LG G
Sbjct: 4107 LGHGDSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRG-- 4164
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ L G+ + G + SVA+T G V +WG G RLGHG E I
Sbjct: 4165 GSDGCKVPMKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGTEDHI--- 4221
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
PR L+G K+ A G LH + G VY
Sbjct: 4222 ------RRPRRCTTLQGKKIVSIACGSLHCVACTDAGEVY-------------------- 4255
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
TWG N+ G LG G+ + + P R+ +++V+CG H+ A S K
Sbjct: 4256 ----------TWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACGSAHSLAWSTNK 4304
Query: 341 ILTWG 345
+ G
Sbjct: 4305 PVNAG 4309
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 159/363 (43%), Gaps = 69/363 (19%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-----EVVQI 128
K + CG T+ V+ GLND QLG G ++ G+ + + VQI
Sbjct: 2901 KKVKCGSGVKDIQTQ---VFVWGLNDKDQLG-----GPKGSKIKTPGINETLSTLKCVQI 2952
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GF 186
G +T DG+L+ G+ +NG+LGLG A V P P ++ LS K+ A+ G
Sbjct: 2953 VGGSKSLFCVTQDGKLFACGEATNGRLGLGISAGNV-PQPRQLTSLSQYVIKKVAVHSGG 3011
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
++A+T GKV SWG G G+LGH F R + PRLI+ L +V+ A G
Sbjct: 3012 RHAMALTVDGKVFSWGEGDDGKLGH--------FSRMNCD-KPRLIEALRSKRVRDIACG 3062
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG-------------------- 286
HSA I NG +Y +G ++ + RP L+
Sbjct: 3063 GSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQLRPKLVKALEGQRVIQVALGSRDAQTLA 3122
Query: 287 ----GELYTWGSNENGCLGIGSID---VLHSPERVQGPFSESPVDQVSCGWKHTAAISE- 338
G +Y+WG + G LG G + V H ER+ G V Q+ CG + + A+++
Sbjct: 3123 LTDSGTVYSWGDGDFGKLGRGGSEGCSVPHPIERLNG----VGVCQIECGAQFSLALTKS 3178
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G++ TWG G +LGHG D P +V + K V+ G H +
Sbjct: 3179 GQVWTWGKGDYF------------RLGHGTDAHVRKPQLVETLKGKKVTHVAVGALHCLS 3226
Query: 399 LLE 401
+L+
Sbjct: 3227 VLD 3229
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 119/249 (47%), Gaps = 37/249 (14%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI 138
G+H L LT G VY+ G DFG+LG + + P+ I+ L K VV ++ G HHS+AI
Sbjct: 487 GSHCLALTSEGDVYSWGNGDFGKLGHGDTVTCD-SPMLINELHGKSVVNVACGSHHSAAI 545
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGG 196
T GEL+ WG+ S G+LGLG + + I P V L G+ A G Q++A+ G
Sbjct: 546 TASGELFTWGRGSFGRLGLG--STEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTG 603
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
V SWG G G+LG G S P+L+ +L+G+ V G +SA + +N
Sbjct: 604 SVYSWGDGEYGKLGRGG---------SEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKN 654
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELYTWGS 294
G V+ +G+ K+ H R P + GEL +WG
Sbjct: 655 GAVFTWGNGEGYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEGELLSWGR 714
Query: 295 NENGCLGIG 303
N+ G LG G
Sbjct: 715 NDKGQLGEG 723
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 163/387 (42%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG PV C L GG TLF +T G V ATG G
Sbjct: 3941 WGHNHRGQLGGVEGAKVKLPVSCETLATMRPVQL-IGGEQTLFSITGDGKVCATGYGAGG 3999
Query: 102 QLGISENIGYSLEPL--RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LGI + L I + V I++G H A++ +GE+Y WG+ +G+LG G
Sbjct: 4000 RLGIGGTDSVATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHGN 4059
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +E L G A G S +T G++ SWG G GRLGHG
Sbjct: 4060 RSP--CDRPRAIESLRGKEVVDIAAGGAHSACITSTGELYSWGKGRYGRLGHGD------ 4111
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S + P+L+ L+G +V A +G + CI ++ V+ +GD K+ +
Sbjct: 4112 ---SEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDG 4168
Query: 278 ARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER-- 313
+ P +L G +YTWG + LG G+ D + P R
Sbjct: 4169 CKVPMKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGTEDHIRRPRRCT 4228
Query: 314 -VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+QG + ++CG H A ++ G++ TW G + GQLG G
Sbjct: 4229 TLQG----KKIVSIACGSLHCVACTDAGEVYTW------------GDNDEGQLGDGTTNA 4272
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG H+ A
Sbjct: 4273 IQRPRLVAALQGKKINRVACGSAHSLA 4299
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 131/336 (38%), Gaps = 79/336 (23%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL---RISGLKK-EVVQISTG 131
+AC L L TG VY + S EP IS L E+++++
Sbjct: 439 VACSSNSLLILLRTGRVY--------------KMTNSAEPQSMHEISTLADIEIIKLAAH 484
Query: 132 YH--HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
H A+T +G++Y WG G+LG G P + L G A G S
Sbjct: 485 SEGSHCLALTSEGDVYSWGNGDFGKLGHGDTV--TCDSPMLINELHGKSVVNVACGSHHS 542
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T G++ +WG G GRLG G IL TP L+ L GV V A G
Sbjct: 543 AAITASGELFTWGRGSFGRLGLGSTEDIL---------TPALVSGLLGVTVVDVACGS-- 591
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
GD A+ +L G +Y+WG E G LG G +
Sbjct: 592 -------------GD-------------AQTIALADTGSVYSWGDGEYGKLGRGGSEGCK 625
Query: 310 SP---ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 365
+P +++QG V +V CG +++AA+ + G + TWG G G +LG
Sbjct: 626 APKLVDKLQG----LDVTRVYCGPQYSAAVCKNGAVFTWGNG------------EGYKLG 669
Query: 366 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
HG + P V +S G +H A E
Sbjct: 670 HGTEEHVRFPRQVETLAGKHVTSLSLGSHHCLATTE 705
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 113/252 (44%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G+++ WG N GQLG G + AKV +P E L+ + Q G + ++TG GKV +
Sbjct: 3936 GQIWGWGHNHRGQLG-GVEGAKV-KLPVSCETLATMRPVQLIGGEQTLFSITGDGKVCAT 3993
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP LI+ ++ V F+ I+ G+ +
Sbjct: 3994 GYGAGGRLGIGGTDSV---------ATPTLIESIQHV--------FIRKVAINSGGKHCL 4036
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L + GE+Y+WG E+G LG G+ P ++ +
Sbjct: 4037 --------------------ALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRAIESLRGKE 4076
Query: 322 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD ++ G H+A I S G++ +WG G G+LGHG+ D P +V+
Sbjct: 4077 VVD-IAAGGAHSACITSTGELYSWGKG------------RYGRLGHGDSEDQTKPKLVDA 4123
Query: 381 GENVKALQVSCG 392
+ + V+CG
Sbjct: 4124 LKGYRVTDVACG 4135
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 73/178 (41%), Gaps = 54/178 (30%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G +GRLGLGS E P + S ++ +ACG A T+ L +TG VY+ G ++
Sbjct: 554 WGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVYSWGDGEY 613
Query: 101 GQLG---------------------------------ISEN-------------IGYSLE 114
G+LG + +N +G+ E
Sbjct: 614 GKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTE 673
Query: 115 -----PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
P ++ L K V +S G HH A T +GEL WG+N GQLG G K P
Sbjct: 674 EHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEGELLSWGRNDKGQLGEGHTGLKAEP 731
>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
domestica]
Length = 1051
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 155/331 (46%), Gaps = 57/331 (17%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQIST 130
S+K +ACGG H++FL E G VY GLN GQLG E G +P +I L + ++ ++
Sbjct: 36 SIKEVACGGNHSIFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGALADQHIIHVAC 92
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G HS A++ G+L+ WG S+GQLG + IP ++ L+ Q + G +
Sbjct: 93 GESHSLALSDQGQLFSWGAGSDGQLG-HTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCM 151
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+ G+ +WG G+LG G+E S+ +P+ +K LEG+ + AAG HS
Sbjct: 152 ALAADGQFFTWGQNRHGQLGLGKEFP--------SQASPQRVKSLEGIPLAQVAAGGAHS 203
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHS 310
+ +G V FG WG N G LG+ S
Sbjct: 204 FALSLSGAV--FG----------------------------WGRNNAGQLGLSDETDRQS 233
Query: 311 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 369
P V+ ++ V +SCG +HTA +++ G + T+G G S GQLGH +
Sbjct: 234 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SFGQLGHDSM 280
Query: 370 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
D ++P V + Q++CG HT A +
Sbjct: 281 NDEVNPRRVLELMGSEVTQIACGRQHTLAFV 311
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 140/321 (43%), Gaps = 56/321 (17%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG + P I
Sbjct: 75 KPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKK 134
Query: 121 LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++++ Q+S G H A+ DG+ + WG+N +GQLGLGK+ P +V+ L GI
Sbjct: 135 LNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQAS-PQRVKSLEGIPL 193
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V WG +G+LG E T +P +K L K
Sbjct: 194 AQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDE---------TDRQSPCHVKLLRTQK 244
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
V + G H+A + ++G V +T+G+ G
Sbjct: 245 VVYISCGEEHTAVLTKSGGV------------------------------FTFGAGSFGQ 274
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDG 357
LG S++ +P RV S V Q++CG +HT A S G I +G G
Sbjct: 275 LGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR-------- 325
Query: 358 HSSGGQLGHGNDVDYIHPTIV 378
GQLG G+ + P+ V
Sbjct: 326 ----GQLGTGHTCNVKCPSPV 342
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL R P + ++CG HT LT++G V+ G FGQ
Sbjct: 215 WGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQ 274
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 275 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 333
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 334 CNVKCPSPVK 343
>gi|344292741|ref|XP_003418084.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Loxodonta africana]
Length = 1100
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 150/317 (47%), Gaps = 52/317 (16%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +RP+ A + +K ACG HTL TE G VYATG N+ G
Sbjct: 54 MFGSNNWGQLGLGSKSAVYRPICVKALKSEKVKLAACGRNHTLVSTEGGNVYATGGNNEG 113
Query: 102 QLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG+ E + L S + ++ Q+S G + S+A+T DGEL+MWG NS GQ+GL
Sbjct: 114 QLGLGDTEERNSFHLISFFTS--RHKIKQLSAGANISAALTEDGELFMWGDNSEGQIGLN 171
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ +P V G + G+ S VT GK+ ++G G+LG E I
Sbjct: 172 SISNVYVPRQVTV----GKPISWISCGYYHSAFVTMEGKLYTFGEPECGKLGLPSEQLI- 226
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ P+L+ + +++A G G + ++AV
Sbjct: 227 ------NHRKPQLVSGISEKVIQVACGG----------GHTVVLTEKAV----------- 259
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPER-VQGPFSESPVDQVSCGWKHTAAIS 337
YT+G G LG+GS + +PE + + + +SCG HTA I+
Sbjct: 260 -----------YTFGQGRFGQLGLGSF-IFQAPEPAILEHVKDQKIRHISCGENHTALIT 307
Query: 338 E-GKILTWGWGGSHGTF 353
+ G + T+G G HG
Sbjct: 308 DVGHMYTFG-DGRHGKL 323
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 156/337 (46%), Gaps = 57/337 (16%)
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
++G V+ FG+ ++ENI P + + +S G H++ IT + +LYM+
Sbjct: 6 DSGAVFT-----FGKTRLAENI-----PSKFWFKNDVPIYLSCGDEHTALITGNNKLYMF 55
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G N+ GQLGLG K+A PI V+ L K AA G ++ T GG V + G G
Sbjct: 56 GSNNWGQLGLGSKSAVYRPIC--VKALKSEKVKLAACGRNHTLVSTEGGNVYATGGNNEG 113
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LG G F S +T R K+K +AG SA + E+G ++++GD +
Sbjct: 114 QLGLGDTEERNSF-HLISFFTSRH-------KIKQLSAGANISAALTEDGELFMWGDNSE 165
Query: 268 DKMLFQEGNHARRPSLIS--------------------GGELYTWGSNENGCLGIGSIDV 307
++ ++ P ++ G+LYT+G E G LG+ S +
Sbjct: 166 GQIGLNSISNVYVPRQVTVGKPISWISCGYYHSAFVTMEGKLYTFGEPECGKLGLPSEQL 225
Query: 308 LH--SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 365
++ P+ V G SE V QV+CG HT ++E + T+G G F GQLG
Sbjct: 226 INHRKPQLVSG-ISEK-VIQVACGGGHTVVLTEKAVYTFG----QGRF--------GQLG 271
Query: 366 HGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G+ + P I+ ++ K +SCG NHT + +
Sbjct: 272 LGSFIFQAPEPAILEHVKDQKIRHISCGENHTALITD 308
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F K + +ACGG H L
Sbjct: 315 FGDGRHGKLGLGLENFTNQFVPTLCSHFSKFIIHLVACGGCHMLIF 360
>gi|74177548|dbj|BAB30989.3| unnamed protein product [Mus musculus]
Length = 596
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 124/244 (50%), Gaps = 8/244 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ +G+LG +S RP A + ++CG H++ + G V+ G GQL
Sbjct: 4 GDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFPWGAGSEGQL 63
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ DG ++ WG+NS GQLGLGK +
Sbjct: 64 GIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKN-S 122
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ IP KV+ L GI Q A G S A++ G WG+ SG+L ++ G
Sbjct: 123 RSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQL------ALSGNKV 176
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + E G+V+ FG + ++ + R P
Sbjct: 177 KEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQ 236
Query: 283 LISG 286
LI G
Sbjct: 237 LIEG 240
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G E + P A + ++CG H+L L+E G V++ G N G
Sbjct: 55 WGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEG 114
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ +N P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 115 QLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGN 174
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + I P + L + + G+E + +T G+V ++G SG+L S G
Sbjct: 175 KVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 234
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+LI+ + G +I A + A + G+V G
Sbjct: 235 ---------PQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 269
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 110/261 (42%), Gaps = 56/261 (21%)
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
Y G NS GQLG + + P P ++ L+ + + G E SVAV GKV WGAG
Sbjct: 1 YSCGDNSWGQLGQRRDQSTERPEP--IQALNDLHVDLVSCGKEHSVAVCHKGKVFPWGAG 58
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LG G+ I + P IK L G+K+ + G HS + E+G V+
Sbjct: 59 SEGQLGIGEFKEI--------SFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVF---- 106
Query: 265 RAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPV 323
+WG N G LG+G + P++V+ P+
Sbjct: 107 --------------------------SWGRNSEGQLGLGKNSRSQAIPQKVKS-LEGIPL 139
Query: 324 DQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG-HGNDV--DYIHPTIVNF 380
QV+ G H+ A+S ++GWG + GQL GN V P +
Sbjct: 140 AQVAAGGTHSFALSLTGT-SFGWGSNR----------SGQLALSGNKVKEQIYKPHSIGA 188
Query: 381 GENVKALQVSCGFNHTGALLE 401
+N+ + +SCG+ HT L E
Sbjct: 189 LKNLSVIYISCGYEHTAVLTE 209
>gi|444919547|ref|ZP_21239559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444708350|gb|ELW49425.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 684
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 167/373 (44%), Gaps = 57/373 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV + + A+ G +H+L L G V+A G N GQ
Sbjct: 110 WGDNPNGQLGEGTTTRRLVPVQVQGLSE--VVAVTAGSSHSLALRSDGTVWAWGANASGQ 167
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+ + GL EVV + G HS A+ DG ++ WG N++GQLG G
Sbjct: 168 LGEGTTTNR-LVPVPVLGL-SEVVAVEAGSSHSLALRSDGTVWAWGANASGQLGDGTTTK 225
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+++P V+ LSG+ +A G+ S+AV G V +WG SG+LG + ++
Sbjct: 226 RLVP----VQVLSGVVAMEAGSGY--SLAVRNDGTVWAWGYNFSGQLG---DDTV----- 271
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD------------------ 264
TS TP + L +V AAG S + +G V+ +G
Sbjct: 272 -TSRSTPVQVLGLS--EVVAVAAGSSLSLALRSDGTVWAWGSNDYGQRGEGTTSNRAFPV 328
Query: 265 --RAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
R + + +A ++ S G ++ WGSN +G LG G+ P +VQG S
Sbjct: 329 QARGLSGGVAVAAGYAHSLAVRSDGTVWAWGSNASGQLGEGTTSNRSEPVQVQG---LSG 385
Query: 323 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
V VS G + AI S+G + W G ++ GQLG G D + P V
Sbjct: 386 VVAVSAGASSSLAIRSDGTVWAW------------GSNASGQLGDGTTTDRLVPVQVQGL 433
Query: 382 ENVKALQVSCGFN 394
V A+ F+
Sbjct: 434 SGVVAVVAGTSFS 446
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 153/321 (47%), Gaps = 41/321 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN G+LG G+ ++R PV + + A A G H+L L G V+A G N +GQL
Sbjct: 11 GNNGSGQLGDGTRDNRSTPVQVLGLSE--VVAAAAGSIHSLALRNDGTVWAWGYNGYGQL 68
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
G + ++G EP+++ GL V + G++HS A+ DG ++ WG N NGQLG G +
Sbjct: 69 G-NGSLGSRAEPVQVQGLSGG-VSVDAGHYHSLAVRDDGTVWAWGDNPNGQLGEGTTTRR 126
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
++P+ +V+ LS + A G S+A+ G V +WGA SG+LG G +
Sbjct: 127 LVPV--QVQGLSEVVAVTA--GSSHSLALRSDGTVWAWGANASGQLGEGT---------T 173
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM------------- 270
T+ P + L +V AG HS + +G V+ +G A ++
Sbjct: 174 TNRLVPVPVLGLS--EVVAVEAGSSHSLALRSDGTVWAWGANASGQLGDGTTTKRLVPVQ 231
Query: 271 -----LFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 325
+ E ++ + G ++ WG N +G LG ++ +P +V G S V
Sbjct: 232 VLSGVVAMEAGSGYSLAVRNDGTVWAWGYNFSGQLGDDTVTSRSTPVQVLG---LSEVVA 288
Query: 326 VSCGWKHTAAI-SEGKILTWG 345
V+ G + A+ S+G + WG
Sbjct: 289 VAAGSSLSLALRSDGTVWAWG 309
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 158/349 (45%), Gaps = 59/349 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG ++ SR PV + + A+A G + +L L G V+A G ND+GQ
Sbjct: 258 WGYNFSGQLGDDTVTSRSTPVQVLGLSE--VVAVAAGSSLSLALRSDGTVWAWGSNDYGQ 315
Query: 103 LG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G + N + P++ GL V ++ GY HS A+ DG ++ WG N++GQLG G
Sbjct: 316 RGEGTTSNRAF---PVQARGLSGGVA-VAAGYAHSLAVRSDGTVWAWGSNASGQLGEGTT 371
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ + P+ +V+ LSG+ A G S+A+ G V +WG+ SG+LG G
Sbjct: 372 SNRSEPV--QVQGLSGVVAVSA--GASSSLAIRSDGTVWAWGSNASGQLGDGT------- 420
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T P ++ L GV +A F S + +G V+ +G ++
Sbjct: 421 --TTDRLVPVQVQGLSGVVAVVAGTSF--SLAVRNDGTVWGWGYNGYGQLGTFTSLFVLV 476
Query: 281 PSLISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
P ++G G ++ G N+NG LG GS +P +V G
Sbjct: 477 PVQVTGLSGVVAVAAGNLHSLAVRSDGTVWALGRNDNGQLGDGSWTNRSAPVQVTG---L 533
Query: 321 SPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
S V V+ G H+ A+ +G + W G++S GQLG G+
Sbjct: 534 SGVVSVAAGDSHSLAVRYDGSVWAW------------GYNSFGQLGDGS 570
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 161/387 (41%), Gaps = 86/387 (22%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ DYG+ G G+ +R PV A+A G AH+L + G V+A G N GQ
Sbjct: 308 WGSNDYGQRGEGTTSNRAFPVQARGLSGG--VAVAAGYAHSLAVRSDGTVWAWGSNASGQ 365
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S EP+++ GL VV +S G S AI DG ++ WG N++GQLG G
Sbjct: 366 LGEGTTSNRS-EPVQVQGLSG-VVAVSAGASSSLAIRSDGTVWAWGSNASGQLGDGTTTD 423
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+++P+ +V+ LSG+ A F S+AV G V WG G G+LG +L
Sbjct: 424 RLVPV--QVQGLSGVVAVVAGTSF--SLAVRNDGTVWGWGYNGYGQLGTFTSLFVL---- 475
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
P + L GV AAG LHS + +G V+ G D +G+ R
Sbjct: 476 -----VPVQVTGLSGVVA--VAAGNLHSLAVRSDGTVWALGRN--DNGQLGDGSWTNRSA 526
Query: 281 PSLISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
P ++G G ++ WG N G LG GS +P +V G
Sbjct: 527 PVQVTGLSGVVSVAAGDSHSLAVRYDGSVWAWGYNSFGQLGDGSWFQRSAPVQVTGLSGR 586
Query: 321 SPVDQVSCGWKHTAAIS-EGKILTWGW--------------------------------G 347
V S ++ A+ +G + WG+ G
Sbjct: 587 GSVAASS---DYSMAVRYDGTVWAWGFNLYGQLGDGTTSSNQLVPVQVQQLRGVVAVEVG 643
Query: 348 GSH-------GTFSEDGHSSGGQLGHG 367
SH GT G++S GQLG+G
Sbjct: 644 SSHSLALRSDGTVWTWGYNSFGQLGNG 670
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 150/341 (43%), Gaps = 57/341 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R PV + + A+ G +H+L L G V+A G N GQ
Sbjct: 160 WGANASGQLGEGTTTNRLVPVPVLGLSE--VVAVEAGSSHSLALRSDGTVWAWGANASGQ 217
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+++ VV + G +S A+ DG ++ WG N +GQLG +
Sbjct: 218 LGDGTTT-KRLVPVQV---LSGVVAMEAGSGYSLAVRNDGTVWAWGYNFSGQLGDDTVTS 273
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V LS + A G S+A+ G V +WG+ G+ G G S
Sbjct: 274 RSTPV--QVLGLSEVVA--VAAGSSLSLALRSDGTVWAWGSNDYGQRGEGTTS------- 322
Query: 223 STSEYTPRLIKELE-GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ P + L GV V AAG+ HS + +G V+ +G A ++ EG + R
Sbjct: 323 --NRAFPVQARGLSGGVAV---AAGYAHSLAVRSDGTVWAWGSNASGQL--GEGTTSNRS 375
Query: 282 SLI----------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
+ S G ++ WGSN +G LG G+ P +VQG
Sbjct: 376 EPVQVQGLSGVVAVSAGASSSLAIRSDGTVWAWGSNASGQLGDGTTTDRLVPVQVQG--- 432
Query: 320 ESPVDQVSCGWKHTAAI-SEGKILTWGWG----GSHGTFSE 355
S V V G + A+ ++G + WGWG G GTF+
Sbjct: 433 LSGVVAVVAGTSFSLAVRNDGTV--WGWGYNGYGQLGTFTS 471
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 125/277 (45%), Gaps = 43/277 (15%)
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
G V+A G N GQLG S P+++ GL EVV + G HS A+ DG ++ WG
Sbjct: 5 GTVWAAGNNGSGQLGDGTRDNRS-TPVQVLGLS-EVVAAAAGSIHSLALRNDGTVWAWGY 62
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N GQLG G ++ P+ +V+ LSG + A G S+AV G V +WG +G+L
Sbjct: 63 NGYGQLGNGSLGSRAEPV--QVQGLSGGVSVDA--GHYHSLAVRDDGTVWAWGDNPNGQL 118
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA--- 266
G G +T P ++ L +V AG HS + +G V+ +G A
Sbjct: 119 GEGT---------TTRRLVPVQVQGLS--EVVAVTAGSSHSLALRSDGTVWAWGANASGQ 167
Query: 267 -----------------VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
+ +++ E + +L S G ++ WG+N +G LG G+
Sbjct: 168 LGEGTTTNRLVPVPVLGLSEVVAVEAGSSHSLALRSDGTVWAWGANASGQLGDGTTTKRL 227
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 345
P +V S V + G ++ A+ ++G + WG
Sbjct: 228 VPVQVL-----SGVVAMEAGSGYSLAVRNDGTVWAWG 259
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 122/278 (43%), Gaps = 59/278 (21%)
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
DG ++ G N +GQLG G + + P+ +V LS + AA G S+A+ G V +
Sbjct: 4 DGTVWAAGNNGSGQLGDGTRDNRSTPV--QVLGLSEVVA--AAAGSIHSLALRNDGTVWA 59
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE-GVKVKIAAAGFLHSACIDENGRV 259
WG G G+LG+G L S +E P ++ L GV V AG HS + ++G V
Sbjct: 60 WGYNGYGQLGNGS-------LGSRAE--PVQVQGLSGGVSVD---AGHYHSLAVRDDGTV 107
Query: 260 YIFGDRAVDKMLFQEGNHARR--P--------------------SLISGGELYTWGSNEN 297
+ +GD ++ EG RR P +L S G ++ WG+N +
Sbjct: 108 WAWGDNPNGQL--GEGTTTRRLVPVQVQGLSEVVAVTAGSSHSLALRSDGTVWAWGANAS 165
Query: 298 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSED 356
G LG G+ P V G S V V G H+ A+ S+G + W
Sbjct: 166 GQLGEGTTTNRLVPVPVLG---LSEVVAVEAGSSHSLALRSDGTVWAW------------ 210
Query: 357 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
G ++ GQLG G + P V G V A++ G++
Sbjct: 211 GANASGQLGDGTTTKRLVPVQVLSG--VVAMEAGSGYS 246
>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 598
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 153/335 (45%), Gaps = 41/335 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+ G G ++ P A + + A G ++ F+T G +Y TG ND Q
Sbjct: 42 WGRSDLGQTGSGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRDGELYTTGSNDARQ 101
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + +LEP+R+S L+ V ++ G H A+ +G L WG N GQLG G+
Sbjct: 102 LGV-KGREVALEPIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWGSNEYGQLGTGEVG 160
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
A P ++ + G + A G S+A+T G+V S+G G G LGHG
Sbjct: 161 ASAA-QPRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGSFGALGHGD-------- 211
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ P L++ L + AAG SA + +GRV+ +G ++ E +A P
Sbjct: 212 -VNNRAKPTLVQALWPEAIVSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNGEFGNAFLP 270
Query: 282 SLISG--------------------GELYTWGSNENGCLGIGS-------IDVLHSPERV 314
+ G GE+YTWG + +G LG GS L SP RV
Sbjct: 271 QPVPGIEQAVQVACGDHHCIALTRWGEVYTWGLHSSGQLGQGSNLGSEALNGCLCSPSRV 330
Query: 315 QGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 349
++ + QVS G +H+ +S G+ L WG G +
Sbjct: 331 DS-LADQSIRQVSAGARHSFFVSPGEQL-WGAGAN 363
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 128/280 (45%), Gaps = 43/280 (15%)
Query: 41 ALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A WG+ +YG+LG G + S +P V +A G H+L LT +G VY+ G
Sbjct: 144 AAWGSNEYGQLGTGEVGASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGS 203
Query: 100 FGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
FG LG + + +P + L E +V I+ G + S+A+++ G ++ WG+N GQLG G
Sbjct: 204 FGALGHGD-VNNRAKPTLVQALWPEAIVSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNG 262
Query: 159 KKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ +P P + GI Q A G +A+T G+V +WG SG+LG G S
Sbjct: 263 EFGNAFLPQP-----VPGIEQAVQVACGDHHCIALTRWGEVYTWGLHSSGQLGQG---SN 314
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
LG + L G C+ RV D D+ + Q
Sbjct: 315 LGS------------EALNG--------------CLCSPSRV----DSLADQSIRQVSAG 344
Query: 278 ARRPSLISGGE-LYTWGSNENGCLGIGSIDVLHSPERVQG 316
AR +S GE L+ G+N+ G L + S+ + P RV G
Sbjct: 345 ARHSFFVSPGEQLWGAGANDEGQLALQSVPSVALPTRVPG 384
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G + + P E+ +ACG H + LT G VY GL+ GQ
Sbjct: 251 WGRNKYGQLGNGEFGNAFLPQPVPGIEQ--AVQVACGDHHCIALTRWGEVYTWGLHSSGQ 308
Query: 103 LGISENIGYSL------EPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQL 155
LG N+G P R+ L + + Q+S G HS ++ +L+ G N GQL
Sbjct: 309 LGQGSNLGSEALNGCLCSPSRVDSLADQSIRQVSAGARHSFFVSPGEQLWGAGANDEGQL 368
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
L ++ + +PT+V L G+ + A + S+AV
Sbjct: 369 AL--QSVPSVALPTRVPGLPGLPMRFAVAAGDHSIAV 403
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 139/357 (38%), Gaps = 96/357 (26%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
EP+ G+++++ + LY WG++ GQ G G+ P P V+
Sbjct: 14 EPMEADGMERQL-----SWALPELPPAVSSLYTWGRSDLGQTGSGRDQNSTAPEP--VQA 66
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG-HGQESSILGFLRS--------- 223
L G AA G S VT G++ + G+ + +LG G+E ++ S
Sbjct: 67 LQGKDVVHAAGGSYNSAFVTRDGELYTTGSNDARQLGVKGREVALEPIRVSALEMNNVHG 126
Query: 224 ---------------------TSEY-------------TPRLIKELEGVKVKIAAAGFLH 249
++EY PR++K + G AAG H
Sbjct: 127 VACGQGHMLAVVDNGHLAAWGSNEYGQLGTGEVGASAAQPRVLKRIRGAHFARVAAGATH 186
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------G 287
S + +G+VY FG+ + + + N+ +P+L+ G
Sbjct: 187 SLALTSSGQVYSFGEGSFGALGHGDVNNRAKPTLVQALWPEAIVSIAAGEYFSAAVSLSG 246
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGW 346
++TWG N+ G LG G P+ V P E V QV+CG H A++ G++ TWG
Sbjct: 247 RVFTWGRNKYGQLGNGEFGNAFLPQPV--PGIEQAV-QVACGDHHCIALTRWGEVYTWGL 303
Query: 347 GGSHGTFSEDGHSSGGQLGHGNDVD-------YIHPTIVNFGENVKALQVSCGFNHT 396
HSS GQLG G+++ P+ V+ + QVS G H+
Sbjct: 304 -----------HSS-GQLGQGSNLGSEALNGCLCSPSRVDSLADQSIRQVSAGARHS 348
>gi|410908657|ref|XP_003967807.1| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Takifugu rubripes]
Length = 388
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 165/392 (42%), Gaps = 57/392 (14%)
Query: 48 YGRLGLGSLESRWRPVVC--SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
YG+LG G +E R P +C +A + +++ + GG HT +TE G V+ G N GQLG+
Sbjct: 5 YGQLGHGGVEDRPVPGLCDAAALKDKAVRVVTGGGGHTAVITEDGEVFVCGQNHRGQLGL 64
Query: 106 SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
S R GL + V ++ G+ + +T G + G N+ GQLG+G+K A
Sbjct: 65 GHLTDISTLQ-RCLGLTQTVTNVTCGWDFTLFLTDSGRVLSCGSNAFGQLGIGQKPAYTA 123
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
+ VE L AA G S+AVT G V WG G + S + S
Sbjct: 124 DVQI-VESLKAAVVSVAA-GLRHSLAVTDSGCVYQWGIGLMSQAKRTLSPSPVP--SHLS 179
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML----FQEGNHARRP 281
P L+ L ++ AAG +H C+ ENG ++++G ++L F
Sbjct: 180 SVLPSLVPGLNQKMSRVVAAGSMHCVCLTENGDLFLWGSNKHSQLLSSEPFLSSPTPVER 239
Query: 282 SLISG-------------------GELYTWGSNENGCLG-------IGSIDVLHSPERVQ 315
SL+ G G ++TWG G LG + V+
Sbjct: 240 SLLGGETVLRVWSGWTHIVAQTETGRVFTWGRGNYGQLGRHASTSQSSESQSTTEDQEVR 299
Query: 316 GPFSESP----VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
P E P Q++CG +H AI G++L+WGW + G G G+ D
Sbjct: 300 LP-EEVPALQGATQITCGSEHNLAILGGRLLSWGW------------NEHGMCGDGSHAD 346
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
P +V ++ L + CG H+ A+ V
Sbjct: 347 VFQPQLV---PALRPLLIGCGAGHSMAVCAAV 375
>gi|391344902|ref|XP_003746733.1| PREDICTED: LOW QUALITY PROTEIN: RCC1 and BTB domain-containing
protein 1-like [Metaseiulus occidentalis]
Length = 550
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 121/224 (54%), Gaps = 17/224 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ Y ++G PV+ F++ + +ACGG H++ T +G VY G N+ GQ
Sbjct: 121 WGHNGYSQVGNDQNSQANSPVL--VFDRQPVAQIACGGYHSVIRTVSGGVYTWGQNNCGQ 178
Query: 103 LGISENIGYSLEPLRISGLKKEV--VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG+S ++ + P ++ G E+ IS G++ ++A+ GE+Y+WG N NGQLGLG
Sbjct: 179 LGLSASVNHQ-SPRKVGGAIAEMKCTGISCGHNFTTAVFDTGEVYVWGSNGNGQLGLGSL 237
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P P K+E L +F K+ A GF ++A+T G V WGA G+LG +
Sbjct: 238 TNQ--PFPVKIEQLKDVFIKKVACGFSHTLALTDEGLVYVWGANALGQLGTENK------ 289
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
T++ P L+K + G ++AA + SA + E +V ++G
Sbjct: 290 ---TNQSIPVLMKTIHGRINEVAATQYNQTSAAMTETSKVLMWG 330
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 123/247 (49%), Gaps = 23/247 (9%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQ 102
G+ G LG+G S P K +++ ACG G H L LT G VY G N + Q
Sbjct: 69 GSNAAGCLGIGDTRSCLSPTKVEGLSKKGVQSFACGTGPHVLALTARGEVYGWGHNGYSQ 128
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+G +N + P+ + ++ V QI+ G +HS TV G +Y WG+N+ GQLGL
Sbjct: 129 VGNDQN-SQANSPVLVFD-RQPVAQIACGGYHSVIRTVSGGVYTWGQNNCGQLGLSASVN 186
Query: 163 KVIPIPT-----KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
P +++C +GI + G + AV G+V WG+ G+G+LG
Sbjct: 187 HQSPRKVGGAIAEMKC-TGI-----SCGHNFTTAVFDTGEVYVWGSNGNGQLG------- 233
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
LG L T++ P I++L+ V +K A GF H+ + + G VY++G A+ ++ + +
Sbjct: 234 LGSL--TNQPFPVKIEQLKDVFIKKVACGFSHTLALTDEGLVYVWGANALGQLGTENKTN 291
Query: 278 ARRPSLI 284
P L+
Sbjct: 292 QSIPVLM 298
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 117/266 (43%), Gaps = 57/266 (21%)
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF-EQSVAVTGGG 196
+T + E++ G N+ G LG+G + + P TKVE LS + A G +A+T G
Sbjct: 59 VTEEDEVWAMGSNAAGCLGIGDTRSCLSP--TKVEGLSKKGVQSFACGTGPHVLALTARG 116
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+V WG G ++G+ Q S +P L+ + + V +IA G+ HS
Sbjct: 117 EVYGWGHNGYSQVGNDQNS---------QANSPVLVFDRQPV-AQIACGGY-HSVI---- 161
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
+SGG +YTWG N G LG+ + SP +V G
Sbjct: 162 -------------------------RTVSGG-VYTWGQNNCGQLGLSASVNHQSPRKVGG 195
Query: 317 PFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
+E +SCG T A+ + G++ WG G+ GQLG G+ + P
Sbjct: 196 AIAEMKCTGISCGHNFTTAVFDTGEVYVWGSNGN------------GQLGLGSLTNQPFP 243
Query: 376 TIVNFGENVKALQVSCGFNHTGALLE 401
+ ++V +V+CGF+HT AL +
Sbjct: 244 VKIEQLKDVFIKKVACGFSHTLALTD 269
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 13/140 (9%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ G+LGLGSL ++ PV + +K +ACG +HTL LT+ G VY G N G
Sbjct: 223 VWGSNGNGQLGLGSLTNQPFPVKIEQLKDVFIKKVACGFSHTLALTDEGLVYVWGANALG 282
Query: 102 QLGISENIGYSLEPLR--ISGLKKEVVQISTGYHHSS-AITVDGELYMWGKNSNGQLGLG 158
QLG S+ L I G EV +T Y+ +S A+T ++ MW GL
Sbjct: 283 QLGTENKTNQSIPVLMKTIHGRINEVA--ATQYNQTSAAMTETSKVLMW--------GLC 332
Query: 159 KKAAKVIPIPTKVECLSGIF 178
+ +P T + + +F
Sbjct: 333 RGQHVTVPTETPFDSVHDVF 352
>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
boliviensis]
Length = 4472
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 141/306 (46%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG GS RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 3701 WGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 3760
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 3761 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 3818
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +PTK++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 3819 -GSDGCKVPTKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3875
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 3876 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 3906
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 3907 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 3957
Query: 340 KILTWG 345
K + G
Sbjct: 3958 KPTSAG 3963
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 139/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 2709 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2768
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 2769 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2826
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ +P +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 2827 -GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2883
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 2884 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 2917
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 2918 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 2961
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3595 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3652
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3653 GRLGIGGTESVSSPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3710
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 3711 HGSRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 3765
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 3766 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3819
Query: 275 GNHARRPS----------------------LISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P+ L G +YTWG + LG GS D + P
Sbjct: 3820 SDGCKVPTKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3879
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 3880 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 3926
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 3927 IQRPRLVAALQGKKVNRVACGSAHTLA 3953
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L +V+ + +G H
Sbjct: 2637 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRH 2696
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 2697 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 2754
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 2755 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2805
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 2806 LTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2865
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 2866 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 2920
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 2921 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2961
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 193 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKAISAFSGKQAGKHVVHIACGSTY 251
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 252 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 309
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 310 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 360
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 361 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 420
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 421 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 465
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P SAF KH + +ACG ++ +T G +Y G
Sbjct: 208 WGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 266
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 267 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 325
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 326 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 383
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 384 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 423
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 149/353 (42%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ +G VY N +L P + GL
Sbjct: 131 PIQCEGLANLGVTQIACAEKRFLILSRSGRVYTQAYN-----------SDTLAPQLVQGL 179
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 180 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKAISAFSG 235
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 236 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 283
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV A G GD A+ ++ G++
Sbjct: 284 MLVAGLKGLKVIDVACG---------------SGD-------------AQTLAVTENGQV 315
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG G
Sbjct: 316 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 374
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 375 NQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 415
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 264 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 323
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 324 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 382
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 383 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 425
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 114/258 (44%), Gaps = 52/258 (20%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2591 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2648
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G L S + PR I L VK A +HS
Sbjct: 2649 GKVYACGEATNGRLGLG--------LSSGTVPIPRQITALSSYMVKKVA---VHSG---- 2693
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 2694 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 2732
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 2733 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 2779
Query: 375 PTIVNFGENVKALQVSCG 392
P +V + +QV+CG
Sbjct: 2780 PKMVKVLLGHRVIQVACG 2797
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 318 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 377
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 378 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 429
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3590 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3647
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ +P L++ ++ V +K A C+
Sbjct: 3648 GYGAGGRLGIGGTESV---------SSPTLLESIQHVFIKKVAVNSGGKHCL-------- 3690
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG GS P ++
Sbjct: 3691 --------------------ALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIE 3730
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 3731 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 3777
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 3778 LQGHRVVDIACG 3789
>gi|149043904|gb|EDL97355.1| rCG61079, isoform CRA_d [Rattus norvegicus]
Length = 245
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 122/237 (51%), Gaps = 15/237 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G E
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 107/270 (39%), Gaps = 55/270 (20%)
Query: 100 FGQLG---ISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
+GQLG I E I LEP + + K+V + G H+ + DG +Y G N GQL
Sbjct: 9 YGQLGLGGIDEEI--VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQL 66
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG-HGQE 214
G K K P +V L + G ++A+ G+V +WG G+LG G E
Sbjct: 67 GHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE 122
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
I PR IK L +++ A G+ HS
Sbjct: 123 ECI---------RVPRNIKSLSDIQIVQVACGYYHSL----------------------- 150
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHT 333
+L E++ WG N+ G LG+G SP+ ++ P QV+ G H+
Sbjct: 151 -------ALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLG-IPFMQVAAGGAHS 202
Query: 334 AAIS-EGKILTWGWG--GSHGTFSEDGHSS 360
++ G I WG G G E+G S
Sbjct: 203 FVLTLSGAIFGWGRNKFGQLGLNDENGRFS 232
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGIS-ENIGYSLE 114
QLG++ EN +SLE
Sbjct: 221 QLGLNDENGRFSLE 234
>gi|159038540|ref|YP_001537793.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157917375|gb|ABV98802.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 579
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 139/355 (39%), Gaps = 56/355 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GRLG G+ PV + ++ A+A G H+L +T G A G N FGQ
Sbjct: 65 WGTNSAGRLGDGTTTDSSSPVSVNVPAGTTITAVAGGAGHSLAVTSAGTALAWGDNAFGQ 124
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG I S P+ + V +S G H+ A+T G WG N GQLG G
Sbjct: 125 LGDGTTIPSSSTPVAVDVPAGTTVTALSGGGVHNLAVTSAGTALAWGDNFWGQLGDGSTT 184
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P+ V +G A G S+AVT G L+WG SG+LG G
Sbjct: 185 RSRTPV--AVNVPAGTTITAVAAGQGHSLAVTSAGTALAWGDNSSGQLGDGT-------- 234
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+T P G + AAG LHS
Sbjct: 235 -ATDSSIPVAADVPAGTTITAVAAGGLHSLA----------------------------- 264
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGK 340
L SGG++ WG+N +G LG G+ +P V P + V V+ G +H+ A+ S G
Sbjct: 265 -LTSGGDVLAWGANGSGQLGDGTTTSSSTPVAVDVPAGTT-VTAVAAGGRHSLAVTSAGD 322
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
+L W G ++ GQLG G+ P VN V+ G H
Sbjct: 323 VLAW------------GDNTAGQLGDGSTTHSSTPVAVNVPAGTTITAVATGSGH 365
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 148/362 (40%), Gaps = 58/362 (16%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ +G+LG G+ + S PV ++ AL+ GG H L +T G A G N +G
Sbjct: 117 WGDNAFGQLGDGTTIPSSSTPVAVDVPAGTTVTALSGGGVHNLAVTSAGTALAWGDNFWG 176
Query: 102 QLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG S P+ ++ + ++ G HS A+T G WG NS+GQLG G
Sbjct: 177 QLGDGSTT-RSRTPVAVNVPAGTTITAVAAGQGHSLAVTSAGTALAWGDNSSGQLGDGTA 235
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
IP+ V G A G S+A+T GG VL+WGA GSG+LG G
Sbjct: 236 TDSSIPVAADVPA--GTTITAVAAGGLHSLALTSGGDVLAWGANGSGQLGDGT------- 286
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+TS TP + G V AAG HS + G
Sbjct: 287 --TTSSSTPVAVDVPAGTTVTAVAAGGRHSLAVTSAG----------------------- 321
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEG 339
++ WG N G LG GS +P V P + + V+ G H+ A+ S
Sbjct: 322 -------DVLAWGDNTAGQLGDGSTTHSSTPVAVNVPAGTT-ITAVATGSGHSLAVTSTD 373
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
L WG TF GQLG G+ I P V+ ++ G H+ A+
Sbjct: 374 TALAWG----DNTF--------GQLGDGSTTSSIIPVAVDLPAGTTVTAIAGGSFHSLAI 421
Query: 400 LE 401
+
Sbjct: 422 VP 423
>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
Length = 1014
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 149/308 (48%), Gaps = 41/308 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+ +G+LG ++ + +P A E + ++CG H+L + G V+A G GQ
Sbjct: 47 YGDNSHGQLGRRDVQRQEQPKRIPALETLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQ 106
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LGI E +L P +I L +++Q+S G+HHS A++ DG L+ WG NS+GQLGLGK+
Sbjct: 107 LGIGEFNEINLIPRKIKTLTDIKIIQVSCGHHHSLALSEDGRLFTWGSNSHGQLGLGKEC 166
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P +V+ L GI Q A G S A++ G WG+ G+L +++ + +
Sbjct: 167 PSQAS-PQRVQFLDGIPLTQVAAGGAHSFALSLSGASFGWGSNSEGQLALRKKN--VPVV 223
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+S+ P + LE + V + G+ H+A + + G+V
Sbjct: 224 QSSK---PCSVDALENLGVVYISCGYEHTAVLTQTGKV---------------------- 258
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEG 339
+T+G N G LG P+ V+G + V Q+ CG HT A + G
Sbjct: 259 --------FTFGGNSYGQLGYSPTAGKEGPQLVEG--IDGLVSQIDCGSYHTLAYVYTTG 308
Query: 340 KILTWGWG 347
K++++G G
Sbjct: 309 KVVSFGRG 316
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 145/304 (47%), Gaps = 48/304 (15%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
L+ A G H+L L G +++ G N GQLG ++ +P RI L+ V +S G
Sbjct: 25 LRQAASGERHSLLLLSNGELHSYGDNSHGQLG-RRDVQRQEQPKRIPALETLRVDLVSCG 83
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+ G ++ WG S GQLG+G + ++ IP K++ L+ I Q + G S+A
Sbjct: 84 KEHSLAVCYKGRVFAWGAGSEGQLGIG-EFNEINLIPRKIKTLTDIKIIQVSCGHHHSLA 142
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ G++ +WG+ G+LG G+E S+ +P+ ++ L+G+ + AAG HS
Sbjct: 143 LSEDGRLFTWGSNSHGQLGLGKECP--------SQASPQRVQFLDGIPLTQVAAGGAHSF 194
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGI--GSIDVLH 309
+L G + WGSN G L + ++ V+
Sbjct: 195 ------------------------------ALSLSGASFGWGSNSEGQLALRKKNVPVVQ 224
Query: 310 SPERVQGPFSESP-VDQVSCGWKHTAAISE-GKILTWGWGGSHGT--FSEDGHSSGGQLG 365
S + E+ V +SCG++HTA +++ GK+ T+G G S+G +S G QL
Sbjct: 225 SSKPCSVDALENLGVVYISCGYEHTAVLTQTGKVFTFG-GNSYGQLGYSPTAGKEGPQLV 283
Query: 366 HGND 369
G D
Sbjct: 284 EGID 287
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 130/283 (45%), Gaps = 57/283 (20%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E+ Q ++G HS + +GEL+ +G NS+GQ LG++ + P ++ L + +
Sbjct: 24 ELRQAASGERHSLLLLSNGELHSYGDNSHGQ--LGRRDVQRQEQPKRIPALETLRVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ + I PR IK L +K+
Sbjct: 82 CGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEI--------NLIPRKIKTLTDIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G HS + E+GR L+TWGSN +G LG+G
Sbjct: 134 SCGHHHSLALSEDGR------------------------------LFTWGSNSHGQLGLG 163
Query: 304 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
SP+RVQ P+ QV+ G H+ A+S ++GWG +S G
Sbjct: 164 KECPSQASPQRVQF-LDGIPLTQVAAGGAHSFALSLSGA-SFGWGS----------NSEG 211
Query: 363 QLG-HGNDVDYIH---PTIVNFGENVKALQVSCGFNHTGALLE 401
QL +V + P V+ EN+ + +SCG+ HT L +
Sbjct: 212 QLALRKKNVPVVQSSKPCSVDALENLGVVYISCGYEHTAVLTQ 254
>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 2003
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 139/310 (44%), Gaps = 52/310 (16%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+K +S G+ H++ ITVDGEL+ WG N++GQLG G A K P +VE L
Sbjct: 1193 EKHAKSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMM 1252
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
+LG E +V + + SWG G G+LGHG ST P+ I+E G K+
Sbjct: 1253 MSLGGEHTVVIDRSFHIYSWGNGKYGQLGHG---------VSTPHNLPKRIEEFAGQKIS 1303
Query: 242 IAAAGFLHSACIDENGRVYIFGDRA---------------VDKMLFQEGNHARRPSLISG 286
A G+ H+ + G ++ FG ++ + +HA +P+ ++G
Sbjct: 1304 SIATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPIPTRVNTADIHHAGQPTRVTG 1363
Query: 287 --------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 332
G++Y++G+N G LG GS + P+ +QG + +++CG H
Sbjct: 1364 IFCGHSHSVLRTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQG-LKGKNIKRITCGPYH 1422
Query: 333 TAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 391
T ++ + WG G LG G++ + + P +V N + +V C
Sbjct: 1423 TVVTTDLDSVYCWGQGEHMC------------LGTGSNKNELVPKLVELFVNKRVERVVC 1470
Query: 392 GFNHTGALLE 401
G HT L +
Sbjct: 1471 GLYHTATLTQ 1480
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 154/355 (43%), Gaps = 70/355 (19%)
Query: 43 WGNGDYGRLG--LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN G+LG L + + + P+ + ++ + ++ GG HT+ + + +Y+ G +
Sbjct: 1218 WGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMSLGGEHTVVIDRSFHIYSWGNGKY 1277
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + ++L P RI +++ I+TGY H+ + G+L+ +G N +GQLGL
Sbjct: 1278 GQLGHGVSTPHNL-PKRIEEFAGQKISSIATGYWHTLVLRSGGDLFAFGSNEHGQLGLND 1336
Query: 160 KAAKVIPIPTKVEC-----------LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
+PIPT+V ++GIF G SV T G V S+GA G+
Sbjct: 1337 LKHH-LPIPTRVNTADIHHAGQPTRVTGIFC-----GHSHSVLRTSHGDVYSFGANAKGQ 1390
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S P+LI+ L+G +K G H+ + V
Sbjct: 1391 LGHGSTESC---------RYPKLIQGLKGKNIKRITCGPYHTVVTTDLDSV--------- 1432
Query: 269 KMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 328
Y WG E+ CLG GS P+ V+ F V++V C
Sbjct: 1433 ---------------------YCWGQGEHMCLGTGSNKNELVPKLVEL-FVNKRVERVVC 1470
Query: 329 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND-----VDYIHPTIV 378
G HTA +++ G + G G S G+LG G D +D +P I+
Sbjct: 1471 GLYHTATLTQ----PMGDSNTGGNVYICGSSEHGKLGIGGDPRSPSLDKAYPAII 1521
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 13/51 (25%)
Query: 318 FSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
F+E VSCGW+H A I+ +G++ TW G+++ GQLGHG
Sbjct: 1191 FNEKHAKSVSCGWEHAAVITVDGELFTW------------GNNTSGQLGHG 1229
>gi|449502541|ref|XP_004161671.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
sativus]
Length = 263
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/72 (73%), Positives = 60/72 (83%)
Query: 331 KHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 390
K T + G I TWGWGGSHGTFS DGHSSGGQLGHG+DVDY+ PT ++ GENVK +QVS
Sbjct: 191 KPTYTLICGAIFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPTKIDLGENVKVVQVS 250
Query: 391 CGFNHTGALLEY 402
CGFNHTGA+LEY
Sbjct: 251 CGFNHTGAILEY 262
>gi|145594878|ref|YP_001159175.1| cell wall anchor domain-containing protein [Salinispora tropica
CNB-440]
gi|145304215|gb|ABP54797.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
Length = 551
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 159/383 (41%), Gaps = 51/383 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G+ G G+ S PV ++ A+A H+L LT G V A G N FGQ
Sbjct: 60 WGDNSFGQFGNGTTASSRTPVPVRLPVGTTVTAIAGSDTHSLALTSVGTVLAWGGNSFGQ 119
Query: 103 LGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG P+R+ + V I+ G HS AIT G ++ WG N+ GQLG G
Sbjct: 120 LGDGTTASSRTPVPVRLP-VGTTVTAIAAGTSHSLAITATGAVFAWGDNAVGQLGDGTTT 178
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+P+P ++ G A G S+AV G L+WG+ G+LG G
Sbjct: 179 DSSLPVPVRLPV--GTTVTAIAGGLGHSLAVASTGATLAWGSNAFGQLGDGT-------- 228
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+T TP + +L V AAG +HS + G VY +G + ++ + + P
Sbjct: 229 -TTGSSTPITVPQLP--TVTAVAAGDVHSLALTSTGTVYAWGANSFGQLGDGSTSDSSTP 285
Query: 282 ------------SLISGGE----------LYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
+++SG + WG N G LG G+ +P V+ P
Sbjct: 286 IAVRVPAGTTATAVVSGADHSLALTAAGGALAWGDNGQGQLGNGATVGSSTPVAVRVPGG 345
Query: 320 ESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
+ + V+ H A+ S L W ++ GQLG+G D P V
Sbjct: 346 AT-LTAVAIHRDHAVAVTSTATALAW------------SRNNEGQLGNGTTTDSSEPVAV 392
Query: 379 NFGENVKALQVSCGFNHTGALLE 401
+ V+ G +H+ AL++
Sbjct: 393 SLPAGTAITAVAVGDDHSLALVD 415
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 112/285 (39%), Gaps = 52/285 (18%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+ D + WG NS GQ G G A+ P+P ++ G A S+A+T
Sbjct: 49 TAAVATD-TILAWGDNSFGQFGNGTTASSRTPVPVRLPV--GTTVTAIAGSDTHSLALTS 105
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G VL+WG G+LG G + S TP ++ G V AAG HS I
Sbjct: 106 VGTVLAWGGNSFGQLGDGTTA---------SSRTPVPVRLPVGTTVTAIAAGTSHSLAIT 156
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRP----------------------SLISGGELYTW 292
G V+ +GD AV ++ + P ++ S G W
Sbjct: 157 ATGAVFAWGDNAVGQLGDGTTTDSSLPVPVRLPVGTTVTAIAGGLGHSLAVASTGATLAW 216
Query: 293 GSNENGCLGIGSIDVLHSPERV-QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 350
GSN G LG G+ +P V Q P V V+ G H+ A+ S G + W
Sbjct: 217 GSNAFGQLGDGTTTGSSTPITVPQLPT----VTAVAAGDVHSLALTSTGTVYAW------ 266
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
G +S GQLG G+ D P V A V G +H
Sbjct: 267 ------GANSFGQLGDGSTSDSSTPIAVRVPAGTTATAVVSGADH 305
>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
Length = 4409
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 157/322 (48%), Gaps = 57/322 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 3590 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 3649
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 3650 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 3708
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P ++ A G ++AV+ G ++ ++G G G+LG G
Sbjct: 3709 TSNKKLP-------------ERVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 3750
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 3751 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 3806
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV-- 314
R +L S G++Y WGSN G LG+G + + P V
Sbjct: 3807 NRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 3866
Query: 315 -QGPFSESPVDQVSCGWKHTAA 335
QG V Q+S G H+AA
Sbjct: 3867 LQG----KNVRQISAGRCHSAA 3884
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 426 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 484
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 485 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 544
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 545 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 600
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 601 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 650
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 651 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 710
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 711 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 743
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 120/244 (49%), Gaps = 23/244 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 3644 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 3703
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKKA 161
LG+ KK +++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 3704 LGLGNTSN-----------KKLPERVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 3752
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 3753 AKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG--------- 3801
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
R+ + P+ + L GV ++ A G H+ + G VY +G + ++ NH R P
Sbjct: 3802 RARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREP 3861
Query: 282 SLIS 285
+L++
Sbjct: 3862 TLVT 3865
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 365 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 420
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 421 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 480
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 481 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 528
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 529 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 558
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 559 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 608
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 609 LQGMFIRKVCAGSQSSLAL 627
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 162/398 (40%), Gaps = 93/398 (23%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWG G +G+L + P +F + + + CG T + G V A G +G
Sbjct: 3539 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 3595
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
+LG + + + IS L+ VV Q+ T HS A+T GE++ WG G+LG
Sbjct: 3596 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 3654
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P ++E L G Q + GF+ S VT GK+ ++G G GRLG G S+
Sbjct: 3655 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 3712
Query: 218 ---------------------------------LGFLRSTSEYTPRLIKELEGVKVKIAA 244
LG ST++ +P+ + L G+ +K A
Sbjct: 3713 KLPERVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVA 3772
Query: 245 AGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
G S + ++G VY FG DR + + NH R
Sbjct: 3773 CGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNR------------------------ 3808
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGG 362
P++V + ++ V+ G +HT A+ S G + WG +S G
Sbjct: 3809 -------PQQVPV-LAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEG 3848
Query: 363 QLGHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 398
QLG G+ PT+V G+NV+ Q+S G H+ A
Sbjct: 3849 QLGLGHTNHVREPTLVTVLQGKNVR--QISAGRCHSAA 3884
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 117/276 (42%), Gaps = 66/276 (23%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 3569 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 3626
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 3627 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 3677
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 3678 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 3707
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PER V+CG HT A+S + W +G DG G+
Sbjct: 3708 NTSNKKLPER------------VACGLNHTLAVSADGSMVWAFG--------DGDY--GK 3745
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P V+ + +V+CG + AL
Sbjct: 3746 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 3781
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 584 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 641
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 642 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 701
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 702 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 743
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 533 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 590
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 591 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 647
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 648 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 699
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 700 --STGPITKPKKVSGLDGIAIQQISAGTSHS 728
>gi|148230808|ref|NP_001088703.1| uncharacterized protein LOC495967 [Xenopus laevis]
gi|56270445|gb|AAH87342.1| LOC495967 protein [Xenopus laevis]
Length = 394
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 172/400 (43%), Gaps = 55/400 (13%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS--LKALACGGAHTLFLTETGCVY 93
QR FA WG YG+LGLG+ + P + + F H +K+++ GG H+ +T+ G VY
Sbjct: 9 QRLFA--WGANSYGQLGLGTTQDSLLPQLVTGFPNHETVIKSISAGGGHSAAVTDAGHVY 66
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G N GQLG++ + L L V +++ G+ + +T GEL G N+
Sbjct: 67 VCGQNSEGQLGLNHTTDVTHFSLCPGTLTLRVSKVACGWDFTLILTDSGELLSCGANTYS 126
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLG + IP P ++ + A G +A+T G++ WG+G +
Sbjct: 127 QLGRAGEERSCIPRPLDIQKRKVL---DVAAGLRHVLALTDNGQIFQWGSGLASHARRFS 183
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
+ + + S++E P + + G+ K+ AAG H + + G VY++G ++L
Sbjct: 184 QQKPIPAVYSSTE--PCAVPGMNGICGKMVAAGSYHCVALSDAGDVYVWGSNKHGQLLHS 241
Query: 274 EGN--HARR-----------PSLISG----------GELYTWGSNENGCLGIGSID---- 306
+ H R +++SG G+++TWG LG
Sbjct: 242 DPFLLHPHRVQAHLFLGERIVAVVSGWTHLVAQTDTGKVFTWGRANYSQLGRPPNSEGTG 301
Query: 307 ----VLHSPERVQGPF---SESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHS 359
VL Q P S + QV+CG +H A+ G + +WGW +
Sbjct: 302 LHETVLQGISANQLPAWIPSLTGSSQVACGSEHNLAVCGGLLYSWGW------------N 349
Query: 360 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G G+G++ + PT+V + + CG H+ AL
Sbjct: 350 EHGMCGNGSETNVPVPTLVGIPPTARVDLIGCGAGHSMAL 389
>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
Length = 4643
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 147/319 (46%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT+ G V++ G + G
Sbjct: 2848 GEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 2907
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG +I +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 2908 KLGHGNSISLD-KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDT 2966
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A + P V+ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 2967 ATQ--SKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGG----- 3019
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S YTP LI L G+ V G S + + G V+ +G ++ +H
Sbjct: 3020 ----SDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3075
Query: 279 RRPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R+P+L+ G G++Y WG N++G G G+ V P V
Sbjct: 3076 RKPTLVEGLRGKKIIHVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTIVNKKPSLVHE 3135
Query: 317 PFSESPVDQVSCGWKHTAA 335
++ V++VSCG H+ A
Sbjct: 3136 -LDDARVNRVSCGSSHSIA 3153
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 139/323 (43%), Gaps = 38/323 (11%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G +S P + + + +K +A GG H L L+ G VY+ G D G
Sbjct: 3842 GYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 3901
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + Y L L E+V I+ G HHS+AIT G LY WGK G+LG G
Sbjct: 3902 KLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSE 3961
Query: 162 AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +E L A G Q++ VT V SWG G G+LG G
Sbjct: 3962 DQL--TPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4013
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P I+ L G+ V G S + +G +Y +G ++ +H R
Sbjct: 4014 ---SDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVR 4070
Query: 280 RPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
RP ++ GE++TWG N+ G LG G+ L P V
Sbjct: 4071 RPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHA- 4129
Query: 318 FSESPVDQVSCGWKHTAAISEGK 340
+ +V+CG HT A S K
Sbjct: 4130 LQGKKITRVACGSAHTLAWSTMK 4152
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 169/386 (43%), Gaps = 57/386 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG PV+C + L GG TLF +T G VYATG G
Sbjct: 3789 WGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLT-GGEQTLFAVTADGKVYATGYGAVG 3847
Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S + LE ++ +KK V +++G H A++ +G +Y WG+ +G+LG
Sbjct: 3848 RLGIGGTDSVMVPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 3905
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P +E L G A G S A+T G + +WG G GRLGHG
Sbjct: 3906 GNRLS--YDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 3959
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + TP+LI+ L+ KV A +G + C+ ++ V+ +GD K+
Sbjct: 3960 -----SEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4014
Query: 276 NHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + P +L G +YTWG + LG G+ D + P +
Sbjct: 4015 DGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRK 4074
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V + ++ G H A ++ G++ TW G + GQLG G
Sbjct: 4075 VAA-LQGKKIISIATGSLHCVACTDKGEVFTW------------GDNDEGQLGDGTTSAL 4121
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGA 398
P +V+ + K +V+CG HT A
Sbjct: 4122 QRPRLVHALQGKKITRVACGSAHTLA 4147
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 158/350 (45%), Gaps = 77/350 (22%)
Query: 92 VYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
VY GLND QLG + + L+P+ I+G K + +S +
Sbjct: 2792 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQ----------E 2841
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G+ +NG+LGLG + P P + LS K+ A+ G + ++A+T GKV
Sbjct: 2842 GKLYACGEGTNGRLGLGDDSNVCEPKP--IPFLSQYVIKKVAVHSGGKHALALTQDGKVF 2899
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G G+LGHG S S PRLI+ L+ +++ A G HSA I +G +
Sbjct: 2900 SWGEGEDGKLGHGN---------SISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGEL 2950
Query: 260 YIFG-----------------DRAVDKMLFQE-------GNHARRPSLISGGELYTWGSN 295
Y +G + V ++ Q A+ +L + G +Y+WG
Sbjct: 2951 YTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDG 3010
Query: 296 ENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 351
+ G LG G D ++P +R+ G V Q+ CG + + A+++ G++ TWG G
Sbjct: 3011 DFGKLGRGGSDGCYTPLLIDRLNG----LGVVQIECGAQFSLALTKYGEVWTWGKGDYF- 3065
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHGND PT+V K + V+ G H A+ +
Sbjct: 3066 -----------RLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTD 3104
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 145/337 (43%), Gaps = 51/337 (15%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
+G +Y G N GQLG E L L S VQ++ G A+T DG++Y G
Sbjct: 3783 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATG 3842
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGS 206
+ G+LG+G + +PT +E + +F K+ A+ G + +A++ G V SWG G
Sbjct: 3843 YGAVGRLGIG--GTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDD 3900
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGHG L + R P+LI+EL G ++ A G HSA I G +Y +G
Sbjct: 3901 GKLGHGNR---LSYDR------PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 3951
Query: 267 VDKMLFQEGNHARRPSLISGGELY------------------------TWGSNENGCLGI 302
++ + P LI + Y +WG + G LG
Sbjct: 3952 YGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4011
Query: 303 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 361
G D P +++ + V +V CG + + A++ G I TWG G H
Sbjct: 4012 GGSDGCKIPMKIES-LAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYH----------- 4059
Query: 362 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+LGHG D P V + K + ++ G H A
Sbjct: 4060 -RLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA 4095
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 121/280 (43%), Gaps = 48/280 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAI 138
G H L LT+ VY+ G + G+LG N+ + EP I L +K + I+ G +S+A+
Sbjct: 511 GTHYLALTQDNSVYSWGNGECGRLG-HGNMTWYDEPKLIEALVEKNITFIACGSTYSAAL 569
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG---FEQSVAVTGG 195
+ +GELY WG+ + G+LG G V+ IPT V L+G A G Q++ VT
Sbjct: 570 SSNGELYTWGRGNYGKLGHGNSDKDVM-IPTLVTALNGHMVVYVACGGGRDPQTLCVTAS 628
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V SWG G G+LG G TP+++ +L + V G SA +
Sbjct: 629 GIVFSWGDGNHGKLGRGG---------CDGSKTPKIVDKLLDINVAKVYCGQQFSAALTA 679
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G V YTWG E+ LG G+ D + P ++
Sbjct: 680 YGEV------------------------------YTWGKGEDYKLGHGNEDHVRYP-KII 708
Query: 316 GPFSESPVDQVSCGWKHTAAISEGKILTWGWG-GSHGTFS 354
+ + G H A++E + L +GWG HG
Sbjct: 709 DILKTKKIKDLYIGHLHVLALTEDQ-LVYGWGRNDHGQID 747
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 23/229 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNG+ GRLG G++ P + A + ++ +ACG ++ L+ G +Y G ++G+
Sbjct: 526 WGNGECGRLGHGNMTWYDEPKLIEALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGK 585
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTG---YHHSSAITVDGELYMWGKNSNGQLGL- 157
LG + + P ++ L VV ++ G + +T G ++ WG ++G+LG
Sbjct: 586 LGHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRG 645
Query: 158 ---GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
G K K+ V+ L I + G + S A+T G+V +WG G +LGHG E
Sbjct: 646 GCDGSKTPKI------VDKLLDINVAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNE 699
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P++I L+ K+K G LH + E+ VY +G
Sbjct: 700 DHV---------RYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGWG 739
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 130/344 (37%), Gaps = 68/344 (19%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV + +K L C + L+ G VY + Y E R+ G
Sbjct: 452 PVYYDTISELGIKQLCCTERAVIILSVNGNVYM--------------MYYGSETQRVYGF 497
Query: 122 KKEVVQISTGYH---HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
++ + + + H A+T D +Y WG G+LG G P +E L
Sbjct: 498 SEKPITMIASHSDGTHYLALTQDNSVYSWGNGECGRLGHGNMTW--YDEPKLIEALVEKN 555
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
A G S A++ G++ +WG G G+LGHG + P L+ L G
Sbjct: 556 ITFIACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDV--------MIPTLVTALNGH 607
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENG 298
V A G G + + + G +++WG +G
Sbjct: 608 MVVYVACG---------------------------GGRDPQTLCVTASGIVFSWGDGNHG 640
Query: 299 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDG 357
LG G D +P ++ + V +V CG + +AA++ G++ TWG G +
Sbjct: 641 KLGRGGCDGSKTP-KIVDKLLDINVAKVYCGQQFSAALTAYGEVYTWGKGEDY------- 692
Query: 358 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHGN+ +P I++ + K + G H AL E
Sbjct: 693 -----KLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTE 731
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 80/217 (36%), Gaps = 55/217 (25%)
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A+T V SWG G GRLGHG T P+LI+ L + A G +
Sbjct: 515 LALTQDNSVYSWGNGECGRLGHGN---------MTWYDEPKLIEALVEKNITFIACGSTY 565
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
SA +L S GELYTWG G LG G+ D
Sbjct: 566 SA------------------------------ALSSNGELYTWGRGNYGKLGHGNSDKDV 595
Query: 310 SPERVQGPFSESPVDQVSCG----WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 365
+ + V V+CG + + G + +WG G+HG +LG
Sbjct: 596 MIPTLVTALNGHMVVYVACGGGRDPQTLCVTASGIVFSWG-DGNHG-----------KLG 643
Query: 366 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 402
G P IV+ ++ +V CG + AL Y
Sbjct: 644 RGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAALTAY 680
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ +LG G+ + P + + +K L G H L LTE VY G ND GQ
Sbjct: 686 WGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGWGRNDHGQ 745
Query: 103 L 103
+
Sbjct: 746 I 746
>gi|5823976|emb|CAB54002.1| RPGR protein [Homo sapiens]
gi|119579848|gb|EAW59444.1| retinitis pigmentosa GTPase regulator, isoform CRA_d [Homo sapiens]
Length = 646
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 180/388 (46%), Gaps = 59/388 (15%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
+ + EN +YT+G + G LG+G+
Sbjct: 255 TVVLTENA-------------------------------VYTFGLGQFGQLGLGTFLFET 283
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
S +V + + +SCG HTA I++ G + T+G G HG LG N
Sbjct: 284 SEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG-DGRHGKLG---------LGLEN 333
Query: 369 DVDYIHPTIV-NFGENVKALQVSCGFNH 395
++ PT+ NF + L V+CG H
Sbjct: 334 FTNHFIPTLCSNFLRFIVKL-VACGGCH 360
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 57/304 (18%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
V +S G HS+ +T + +LYM+G N+ GQLGLG K+A I PT V+ L K AA G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
++ T GG V + G G+LG G ++ F TSE+ K+
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI---------------- 284
K +AG SA + E+GR++++GD + ++ + ++ P +
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202
Query: 285 ----SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 338
+ GELY +G ENG LG+ + L R SE P V QV+CG +HT ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTG 397
+ T+G G GQLG G + + P ++ + +SCG NHT
Sbjct: 261 NAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTA 308
Query: 398 ALLE 401
+ +
Sbjct: 309 LITD 312
>gi|21619468|gb|AAH31624.1| RPGR protein [Homo sapiens]
gi|119579847|gb|EAW59443.1| retinitis pigmentosa GTPase regulator, isoform CRA_c [Homo sapiens]
gi|325464495|gb|ADZ16018.1| retinitis pigmentosa GTPase regulator [synthetic construct]
Length = 480
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 180/388 (46%), Gaps = 59/388 (15%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
+ + EN +YT+G + G LG+G+
Sbjct: 255 TVVLTENA-------------------------------VYTFGLGQFGQLGLGTFLFET 283
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
S +V + + +SCG HTA I++ G + T+G G HG LG N
Sbjct: 284 SEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG-DGRHGKLG---------LGLEN 333
Query: 369 DVDYIHPTIV-NFGENVKALQVSCGFNH 395
++ PT+ NF + L V+CG H
Sbjct: 334 FTNHFIPTLCSNFLRFIVKL-VACGGCH 360
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 143/310 (46%), Gaps = 58/310 (18%)
Query: 121 LKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
K +V V +S G HS+ +T + +LYM+G N+ GQLGLG K+A I PT V+ L
Sbjct: 32 FKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKV 89
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKE 234
K AA G ++ T GG V + G G+LG G ++ F TSE+
Sbjct: 90 KLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH------- 140
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI---------- 284
K+K +AG SA + E+GR++++GD + ++ + ++ P +
Sbjct: 141 ----KIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196
Query: 285 ----------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKH 332
+ GELY +G ENG LG+ + L R SE P V QV+CG +H
Sbjct: 197 CGYYHSAFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEH 254
Query: 333 TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 391
T ++E + T+G G GQLG G + + P ++ + +SC
Sbjct: 255 TVVLTENAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISC 302
Query: 392 GFNHTGALLE 401
G NHT + +
Sbjct: 303 GENHTALITD 312
>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
Length = 1109
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 164/374 (43%), Gaps = 72/374 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + A +++ +ACG HT +T +G +Y G +F
Sbjct: 339 WGEESGGRLGHGVDSDVLHPQLIEALSNTNIEFVACGEYHTCAVTLSGDLYTWGDGTYNF 398
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ ++ G+L+ +G + G LG G
Sbjct: 399 GLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHG 457
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ K I +P +VE L G+ T QAA G + AV GK+ +WG G
Sbjct: 458 DR--KSISLPREVESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 515
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L F AC
Sbjct: 516 GRLGHGDKEAKL---------VPTCVSAL-------VEPNFCQVAC-------------- 545
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
H+ + + G +YT GS G LG D P RV+G S S V+++
Sbjct: 546 ---------GHSLTIARTTSGHVYTMGSPVYGQLGNPQSDG-KLPARVEGKLSRSSVEEI 595
Query: 327 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 385
+CG H A + S+ ++ TWG G + G+LGHG+ D P++V ++ +
Sbjct: 596 ACGAYHVAVLTSKTEVYTWGKGAN------------GRLGHGDTDDKNLPSLVEALKDKQ 643
Query: 386 ALQVSCGFNHTGAL 399
++CG N T A+
Sbjct: 644 VKSIACGTNFTAAI 657
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 103/238 (43%), Gaps = 50/238 (21%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G + + VT G++ SWG GRLGHG +S +L
Sbjct: 305 LPKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVL-------- 356
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
P+LI+ L ++ A G H+ + +G +Y +GD + L GN
Sbjct: 357 -HPQLIEALSNTNIEFVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN---------- 405
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 345
E+ W P+RV GP V +SCG HTA +S G++ T+G
Sbjct: 406 -EVSHW-----------------VPKRVNGPLEGIHVSSISCGPWHTAVVSSAGQLFTFG 447
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
GTF G LGHG+ P V + ++ +Q +CG HT A++E +
Sbjct: 448 ----DGTF--------GVLGHGDRKSISLPREVESLKGLRTVQAACGVWHTAAVVEVM 493
>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
carolinensis]
Length = 1109
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 163/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG +G G S P + S+K +ACGG H++FL E G VY G+N
Sbjct: 63 WGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCGVNTK 122
Query: 101 GQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E G +P +I L + ++ ++ G HS A++ G L+ WG S+GQLGL
Sbjct: 123 GQLG-HEKEGS--KPEQIGALADQHIIHVACGESHSLALSDQGRLFSWGAGSDGQLGLTT 179
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
V +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 180 TEDSVA-VPRLIKKLNQEMILQVSCGNWHCLALAADGQFFAWGQNSHGQLGLGKEFP--- 235
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S+ +P+ +K L+G+ + AAG HS + +G V FG
Sbjct: 236 -----SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAV--FG---------------- 272
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE- 338
WG N +G LG+ SP V+ ++ V +SCG HTA +++
Sbjct: 273 ------------WGKNTSGQLGLSDEQDRESPCHVKLLRTQKVV-YISCGSDHTAVLTKT 319
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G G S GQLGH + D ++P V + Q++CG HT A
Sbjct: 320 GGVFTFGAG------------SCGQLGHDSFNDEVNPRRVLELMGSEVSQIACGRQHTLA 367
Query: 399 LL 400
+
Sbjct: 368 FV 369
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 139/321 (43%), Gaps = 56/321 (17%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG++ P I
Sbjct: 133 KPEQIGALADQHIIHVACGESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKK 192
Query: 121 LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L +E++ Q+S G H A+ DG+ + WG+NS+GQLGLGK+ P +V+ L GI
Sbjct: 193 LNQEMILQVSCGNWHCLALAADGQFFAWGQNSHGQLGLGKEFPSQAS-PQRVKSLDGIPL 251
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V WG SG+LG E +P +K L K
Sbjct: 252 AQVAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQ---------DRESPCHVKLLRTQK 302
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
V + G H+A + + G V +T+G+ G
Sbjct: 303 VVYISCGSDHTAVLTKTGGV------------------------------FTFGAGSCGQ 332
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDG 357
LG S + +P RV S V Q++CG +HT A S G I +G G
Sbjct: 333 LGHDSFNDEVNPRRVLE-LMGSEVSQIACGRQHTLAFVPSSGLIYAFGCG---------- 381
Query: 358 HSSGGQLGHGNDVDYIHPTIV 378
GQLG G+ + P+ V
Sbjct: 382 --IKGQLGSGHTCNLKCPSPV 400
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 109/282 (38%), Gaps = 49/282 (17%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
++ WG S G G +I P + K+ A G S+ + G+V + G
Sbjct: 59 KMLCWGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCG 118
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G+LGH +E S P I L + A G HS + + GR++ +
Sbjct: 119 VNTKGQLGHEKEGS-----------KPEQIGALADQHIIHVACGESHSLALSDQGRLFSW 167
Query: 263 G-------------DRAVDKMLFQEGNHA----------RRPSLISGGELYTWGSNENGC 299
G D L ++ N +L + G+ + WG N +G
Sbjct: 168 GAGSDGQLGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLALAADGQFFAWGQNSHGQ 227
Query: 300 LGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDG 357
LG+G SP+RV+ P+ QV+ G H+ A+S G + W G
Sbjct: 228 LGLGKEFPSQASPQRVKS-LDGIPLAQVAAGGAHSFALSLSGAVFGW------------G 274
Query: 358 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
++ GQLG ++ D P V K + +SCG +HT L
Sbjct: 275 KNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVL 316
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGL + R P + ++CG HT LT+TG V+ G GQ
Sbjct: 273 WGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQ 332
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG ++ + P R+ L EV QI+ G H+ A + G +Y +G GQLG G
Sbjct: 333 LG-HDSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCGIKGQLGSGHT 391
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 392 CNLKCPSPVK 401
>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
Length = 1060
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 160/345 (46%), Gaps = 64/345 (18%)
Query: 44 GNGDYGRLG--LGSLESRWRPVV-----CSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
GN D+G+LG L +L ++ RP + ++ E + + ++CG AH+L LT G V++ G
Sbjct: 61 GNNDHGQLGHDLDTLPNK-RPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQVFSWG 119
Query: 97 LNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
N GQLG G P I + K VVQI++G +H A+T +GELY WG NS GQL
Sbjct: 120 SNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQL 179
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G+G + KV P+PT ++ L+G+ A G S AV+ G + WG G+LG +
Sbjct: 180 GIGTTSEKV-PMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLN 238
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S P ++ L + V+ + G ++ V+
Sbjct: 239 ---------SRCYPTQLRTLRSLGVRYISCG--------DDFSVF--------------- 266
Query: 276 NHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
L + G ++T G+ G LG GS P +V S + Q++CG +HT A
Sbjct: 267 -------LTNEGGVFTCGAGTFGQLGHGSCSNEIVPRKV-FELMGSKITQIACGRRHTLA 318
Query: 336 I--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
S GKI +G GG GQLG G ++ P IV
Sbjct: 319 FVPSRGKIYGFGLGGV------------GQLGIGMVGNHSTPQIV 351
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 164/367 (44%), Gaps = 61/367 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G LGLG +E P + + + CG +HTLFLT+ G +YA G ND
Sbjct: 6 WGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGNNDH 65
Query: 101 GQLGISENIGYSLEPL-----RISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQ 154
GQLG + + P R++ L+ ++ IS G HS A+T G+++ WG N+ GQ
Sbjct: 66 GQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQ 125
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG + + P P ++ + Q A G +A+T G++ +WG+ G+LG G
Sbjct: 126 LGHDAENGRQ-PTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTT 184
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P LI+ L GV + A G HS + ++G IFG
Sbjct: 185 SEKVPM--------PTLIQSLAGVPIAFIACGGNHSFAVSKSGA--IFG----------- 223
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
WG N G LG+ ++ P +++ S V +SCG +
Sbjct: 224 -----------------WGKNTFGQLGLNDLNSRCYPTQLRTLRSLG-VRYISCGDDFSV 265
Query: 335 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 393
++ EG + T G GTF GQLGHG+ + I P V K Q++CG
Sbjct: 266 FLTNEGGVFTCG----AGTF--------GQLGHGSCSNEIVPRKVFELMGSKITQIACGR 313
Query: 394 NHTGALL 400
HT A +
Sbjct: 314 RHTLAFV 320
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 120/280 (42%), Gaps = 53/280 (18%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG ++G+LGLG + + +P K++ + G ++ +T GK+ + G
Sbjct: 3 IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRL-----IKELEGVKVKIAAAGFLHSACIDENGR 258
G+LGH L + PR+ + LE + + G HS + G+
Sbjct: 63 NDHGQLGHD--------LDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQ 114
Query: 259 VYIFGDRAVDKMLFQEGNHARRPS------------------------LISGGELYTWGS 294
V+ +G AV + L + + R+P+ L + GELY WGS
Sbjct: 115 VFSWGSNAVGQ-LGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGS 173
Query: 295 NENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGT 352
N G LGIG+ + + P +Q + P+ ++CG H+ A+S+ G I WG T
Sbjct: 174 NSYGQLGIGTTSEKVPMPTLIQS-LAGVPIAFIACGGNHSFAVSKSGAIFGWG----KNT 228
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
F GQLG + +PT + ++ +SCG
Sbjct: 229 F--------GQLGLNDLNSRCYPTQLRTLRSLGVRYISCG 260
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL L SR P ++ ++CG ++FLT G V+ G FGQ
Sbjct: 224 WGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQ 283
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLG 158
LG + + P ++ L ++ QI+ G H+ A + G++Y +G GQLG+G
Sbjct: 284 LG-HGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIG 340
>gi|313236983|emb|CBY12230.1| unnamed protein product [Oikopleura dioica]
Length = 1048
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 157/361 (43%), Gaps = 59/361 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG DYG+LGLGS E+ S+ ++A G HT++LT T VY+ G N+FGQ
Sbjct: 4 WGKNDYGQLGLGS-ENMLISCPSPIDANQSVISIASGLRHTVYLTSTRKVYSCGSNEFGQ 62
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ P ++G +E+ ++ G S AI G L+ WG++ NG+L + +
Sbjct: 63 LGQQKS---QCRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMCKQDS 119
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ K+ S + Q A G + +A+T G +LSWG+ G+LG G SS + FL
Sbjct: 120 LHEPKLLDKIMHWSVV---QVACGAQHCIALTEEGTILSWGSNTQGQLGLG--SSEIEFL 174
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P +I L + AG HS + P
Sbjct: 175 E------PTIIASLNAFPISQICAGAYHSGVLS--------------------------P 202
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GK 340
S G L+TWG N G LG G+ D S R+ V V+ G +H+ + G
Sbjct: 203 S----GTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGG 258
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
+ +WG GG+ GQLGH + + P + Q+ CG HT +L
Sbjct: 259 VFSWGHGGN------------GQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISLT 306
Query: 401 E 401
+
Sbjct: 307 D 307
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 111/243 (45%), Gaps = 12/243 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G L + +S P + S+ +ACG H + LTE G + + G N GQ
Sbjct: 105 WGRSLNGEL-MCKQDSLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQ 163
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + LEP I+ L + QI G +HS ++ G L+ WGKN+ GQLG G
Sbjct: 164 LGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSD 223
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P V+ L A+G E SV T G V SWG GG+G+LGH +++
Sbjct: 224 S-FQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMANVT--- 279
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P+ I EL G V G H+ + + ++ FG + +++ AR P
Sbjct: 280 ------QPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLGTHNDTSARLP 333
Query: 282 SLI 284
I
Sbjct: 334 ITI 336
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 51/277 (18%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WGKN GQLGLG + +I P+ ++ + + A G +V +T KV S G+
Sbjct: 1 MYGWGKNDYGQLGLGSENM-LISCPSPIDANQSVIS--IASGLRHTVYLTSTRKVYSCGS 57
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LG + S+ P L+ ++ AAG S I E+G ++ +G
Sbjct: 58 NEFGQLG-----------QQKSQCRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWG 106
Query: 264 DRAVDKMLFQEGNHARRPSLISG----------------------GELYTWGSNENGCLG 301
R+++ L + + P L+ G + +WGSN G LG
Sbjct: 107 -RSLNGELMCKQDSLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLG 165
Query: 302 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 360
+GS ++ + + P+ Q+ G H+ +S G + TW G ++
Sbjct: 166 LGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTW------------GKNN 213
Query: 361 GGQLGHGN-DVDYIHPTIVNFGENVKALQVSCGFNHT 396
GQLGHGN D P +V + + + V+ G H+
Sbjct: 214 WGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHS 250
>gi|428164001|gb|EKX33045.1| hypothetical protein GUITHDRAFT_148202 [Guillardia theta CCMP2712]
Length = 371
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 145/297 (48%), Gaps = 35/297 (11%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G G+LGLG+ +S + P S +KAL+CGG+H+LF+TE G +YATG G
Sbjct: 102 VWGRGFSGQLGLGTNKSHFTPQPLSF--PMPVKALSCGGSHSLFITEDGRLYATGRGKEG 159
Query: 102 QLGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG S+ S +++ V G S T G+++ +G + GQLGLG +
Sbjct: 160 QLGTGSQESVLSPVEVQMPEGSGRVKAAECGKDFSVIATESGQVFTFGSDDYGQLGLG-Q 218
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A+ P +V L+G + A G + AVT GK+ +WG G SG+LG+G +
Sbjct: 219 FARYAMTPKEVAVLAGKNVRSIAAGDYHAAAVTSDGKLYTWGYGRSGQLGNGNTVDV--- 275
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P L++EL+ ++V+ A G H+ + DR + + L +
Sbjct: 276 ------SLPVLVRELQNLRVQSVACGCDHTVAVI---------DRGLKEQLMLISSQ--- 317
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAA 335
++ GE++ G G LG G D++ SP + P V QV+CG HT A
Sbjct: 318 --VLESGEVFVMGRGREGQLGRG--DIVESP----AVYRSVPLQVQQVACGTSHTLA 366
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 141/304 (46%), Gaps = 60/304 (19%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+G LG+ E + L P +++ + V +S G+ H++AI G++++WG+ +GQLGLG
Sbjct: 59 WGLLGLGETLDV-LYPQKVN--LEGVTCVSAGHRHAAAIVGGGDVFVWGRGFSGQLGLGT 115
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P + K + G S+ +T G++ + G G G+LG G + S+L
Sbjct: 116 NKSHFTPQPLSFP----MPVKALSCGGSHSLFITEDGRLYATGRGKEGQLGTGSQESVL- 170
Query: 220 FLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+P ++ EG +VK A G S E+G+V
Sbjct: 171 --------SPVEVQMPEGSGRVKAAECGKDFSVIATESGQV------------------- 203
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-S 337
+T+GS++ G LG+G + + V ++ G H AA+ S
Sbjct: 204 -----------FTFGSDDYGQLGLGQFARYAMTPKEVAVLAGKNVRSIAAGDYHAAAVTS 252
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
+GK+ TWG+G S GQLG+GN VD P +V +N++ V+CG +HT
Sbjct: 253 DGKLYTWGYGRS------------GQLGNGNTVDVSLPVLVRELQNLRVQSVACGCDHTV 300
Query: 398 ALLE 401
A+++
Sbjct: 301 AVID 304
>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
Length = 992
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 145/307 (47%), Gaps = 42/307 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG +P A E + ++CG H+L + G V+A G GQL
Sbjct: 20 GDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 79
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E + P +I L +++Q++ G++HS A++ DG+++ WGKNS+GQLGLGK+
Sbjct: 80 GIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQVFSWGKNSHGQLGLGKEFP 139
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 140 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQL------ALSGNNA 192
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+ L+ + V + G+ H+A + ++G+V+ FGD + ++ R P
Sbjct: 193 PVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHDSTAEKRGPQ 252
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGK 340
L+ ER++G V Q+ CG HT A + G+
Sbjct: 253 LV---------------------------ERIEG-----LVSQIDCGSYHTLAYVYTTGQ 280
Query: 341 ILTWGWG 347
++++G G
Sbjct: 281 VVSFGRG 287
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 110/230 (47%), Gaps = 14/230 (6%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G+LG+G L E+ + P + +ACG H+L L+E G V++
Sbjct: 67 RVFA--WGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQVFSW 124
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG N+ GQ
Sbjct: 125 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQ 184
Query: 155 LGLGKKAAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L L A V P V L + + G+E + +T GKV ++G G+LGH
Sbjct: 185 LALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHDS 244
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ +EG+ +I + A + G+V FG
Sbjct: 245 TAEKRG---------PQLVERIEGLVSQIDCGSYHTLAYVYTTGQVVSFG 285
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 122/276 (44%), Gaps = 56/276 (20%)
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
+G HHS + DG + G NS GQ LG+K P ++ L + + G E S
Sbjct: 2 SGEHHSLLLLSDGTVQSCGDNSRGQ--LGRKGTPRGEQPERIPALETLHVALVSCGKEHS 59
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+AV G+V +WGA G+LG G+ L+ T+ + P+ IK L +K+ A G H
Sbjct: 60 LAVCHKGRVFAWGAASEGQLGIGE-------LKETT-FIPKKIKTLADIKIIQVACGHYH 111
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG-SIDVL 308
S + E+G+V ++WG N +G LG+G
Sbjct: 112 SLALSEDGQV------------------------------FSWGKNSHGQLGLGKEFPSQ 141
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL---G 365
SP+RV+ P+ QV+ G H+ A+S ++GWG ++ GQL G
Sbjct: 142 ASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGT-SFGWGSNN----------AGQLALSG 189
Query: 366 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ V P +V + + + +SCG+ HT L +
Sbjct: 190 NNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQ 225
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 105/210 (50%), Gaps = 13/210 (6%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G + G N+ G
Sbjct: 124 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAG 183
Query: 102 QLGISENIG--YSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N +P+ + LK VV IS GY H++ +T DG+++ +G NS GQLG
Sbjct: 184 QLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHD 243
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG-GSGRLGHGQESSI 217
A K P VE + G+ ++ + V G+V+S+G G G R E+
Sbjct: 244 STAEK--RGPQLVERIEGLVSQIDCGSYHTLAYVYTTGQVVSFGRGPGCTRSSPHPEA-- 299
Query: 218 LGFLRSTSEYTPRL-IKELEGVKVKIAAAG 246
L +S+ + + +LE V+VK AG
Sbjct: 300 ---LAESSDVSCLISANDLEDVQVKHIFAG 326
>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 353
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 167/343 (48%), Gaps = 47/343 (13%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++++ D + G I + R + +G+ D+G+LGLG ++ +P + +
Sbjct: 29 SKFWIRNDKAMHISCGDEHSAIITESGRLYT--FGSNDWGQLGLGHMKPTTKPGCVKSLK 86
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
+ + +ACG +HT+ T+ G +Y+ G GQLG + + P I+ +++ +S
Sbjct: 87 QEGVNLVACGRSHTIVCTKAGRLYSFGAGSDGQLGTGD-AQCATSPQLINLPEQKYKLLS 145
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G HS+A+T DG LYMWG S GQLGLG + + P +++ S + + G+ +
Sbjct: 146 AGTDHSAALTTDGTLYMWGSGSEGQLGLGNTDS--VETPKELKFHSSV--SWVSCGYYHT 201
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT GK+ ++G G+LG ++ L T+ TP+ ++ + K+K+ A G H
Sbjct: 202 AIVTDDGKLYTFGEKEFGKLGLTEDQ-----LEDTT--TPKHVESIT-EKIKLVACGGAH 253
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
+A I + G +Y FG D M Q GN PSL+ L
Sbjct: 254 TAVISDVGNLYTFG----DGMHGQLGN---GPSLLQ----------------------LS 284
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 351
P++V SE VSCG HTA I+E G + T+G G HG
Sbjct: 285 LPQKV-ARLSEHKCKYVSCGDNHTAVITEKGAMYTFG-DGRHG 325
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 148/340 (43%), Gaps = 60/340 (17%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
+ ETG ++ FG+ ++N+ P + + + IS G HS+ IT G LY
Sbjct: 9 IPETGAIFT-----FGKSRFADNL-----PSKFWIRNDKAMHISCGDEHSAIITESGRLY 58
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
+G N GQLGLG K P V+ L A G ++ T G++ S+GAG
Sbjct: 59 TFGSNDWGQLGLGH--MKPTTKPGCVKSLKQEGVNLVACGRSHTIVCTKAGRLYSFGAGS 116
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LG G + +P+LI L K K+ +AG HSA + +G +Y++G
Sbjct: 117 DGQLGTGD---------AQCATSPQLIN-LPEQKYKLLSAGTDHSAALTTDGTLYMWGSG 166
Query: 266 AVDKMLFQEGNHARRPS--------------------LISGGELYTWGSNENGCLGI--G 303
+ ++ + P + G+LYT+G E G LG+
Sbjct: 167 SEGQLGLGNTDSVETPKELKFHSSVSWVSCGYYHTAIVTDDGKLYTFGEKEFGKLGLTED 226
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 362
++ +P+ V+ + + V+CG HTA IS+ G + T+G G H G
Sbjct: 227 QLEDTTTPKHVESITEK--IKLVACGGAHTAVISDVGNLYTFG-DGMH-----------G 272
Query: 363 QLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNHTGALLE 401
QLG+G + + P V K VSCG NHT + E
Sbjct: 273 QLGNGPSLLQLSLPQKVARLSEHKCKYVSCGDNHTAVITE 312
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 95/176 (53%), Gaps = 6/176 (3%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLNDF 100
+WG+G G+LGLG+ +S P + HS + ++CG HT +T+ G +Y G +F
Sbjct: 162 MWGSGSEGQLGLGNTDSVETP---KELKFHSSVSWVSCGYYHTAIVTDDGKLYTFGEKEF 218
Query: 101 GQLGISEN-IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG++E+ + + P + + +++ ++ G H++ I+ G LY +G +GQLG G
Sbjct: 219 GKLGLTEDQLEDTTTPKHVESITEKIKLVACGGAHTAVISDVGNLYTFGDGMHGQLGNGP 278
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+ + +P KV LS K + G + +T G + ++G G G+LG +E
Sbjct: 279 SLLQ-LSLPQKVARLSEHKCKYVSCGDNHTAVITEKGAMYTFGDGRHGKLGISEED 333
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 6/133 (4%)
Query: 43 WGNGDYGRLGL--GSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
+G ++G+LGL LE P V S EK +K +ACGGAHT +++ G +Y G
Sbjct: 213 FGEKEFGKLGLTEDQLEDTTTPKHVESITEK--IKLVACGGAHTAVISDVGNLYTFGDGM 270
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLG ++ P +++ L + + +S G +H++ IT G +Y +G +G+LG+
Sbjct: 271 HGQLGNGPSLLQLSLPQKVARLSEHKCKYVSCGDNHTAVITEKGAMYTFGDGRHGKLGIS 330
Query: 159 KKAAKVIPIPTKV 171
++ I P KV
Sbjct: 331 EEDFCNIFKPCKV 343
>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
distachyon]
Length = 1092
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 161/374 (43%), Gaps = 72/374 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + A +++ +ACG HT +T +G +Y G F
Sbjct: 337 WGEESGGRLGHGVDCDVAHPKLIDALTHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 396
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG +I + + P ++ G + V IS G H+ +T G+L+ +G S G LG G
Sbjct: 397 GLLGHGNDISHWV-PKKLHGPLEGIHVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHG 455
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 456 DRES--LSVPKEVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDK 513
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + S L P + L F AC
Sbjct: 514 GRLGHGDKESRL---------VPTCVAAL-------VEPNFCQVAC-------------- 543
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
H +L + G +YT GS G LG D + P RV+G ++ V+++
Sbjct: 544 ---------GHCLTVALTTSGHVYTMGSAVYGQLGNPQADGM-LPARVEGKLHKNFVEEI 593
Query: 327 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 385
SCG H A + S ++ TWG G + G+LGHGN D PT+V ++ +
Sbjct: 594 SCGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGNTDDKNTPTLVEALKDKQ 641
Query: 386 ALQVSCGFNHTGAL 399
V CG N T A+
Sbjct: 642 VRNVVCGTNFTAAI 655
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 125/302 (41%), Gaps = 71/302 (23%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL + ++ +V IS G H++ ++ GE+Y WG+ S G+LG G + P ++
Sbjct: 305 KPLEFA-VRLDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCD--VAHPKLIDA 361
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ + + A G + AVT G + +WG G G LGHG + S + P+
Sbjct: 362 LTHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGND---------ISHWVPKK 412
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
+ LEG+ V + G H+ + G+++ FGD +
Sbjct: 413 LHGPLEGIHVSSISCGPFHTVIVTSAGQLFTFGDGSF----------------------- 449
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------------ 338
G LG G + L P+ V+ V + +CG HTAA+ E
Sbjct: 450 -------GVLGHGDRESLSVPKEVESLKGLRTV-RAACGVWHTAAVVEVMAGNSSSSNCS 501
Query: 339 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
GKI TWG G G+LGHG+ + PT V QV+CG T
Sbjct: 502 SGKIFTWGDGDK------------GRLGHGDKESRLVPTCVAALVEPNFCQVACGHCLTV 549
Query: 398 AL 399
AL
Sbjct: 550 AL 551
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 52/239 (21%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + + G + + V+ G++ SWG GRLGHG + +
Sbjct: 303 VPKPLEFAVRLDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVA-------- 354
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
P+LI L + +++ A G H+ + +G +Y +GD
Sbjct: 355 -HPKLIDALTHMNIELVACGEYHTCAVTLSGDLYTWGD---------------------- 391
Query: 287 GELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTW 344
G+ + G LG G+ D+ H P+++ GP V +SCG HT + S G++ T+
Sbjct: 392 ------GTFKFGLLGHGN-DISHWVPKKLHGPLEGIHVSSISCGPFHTVIVTSAGQLFTF 444
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
G G S G LGHG+ P V + ++ ++ +CG HT A++E +
Sbjct: 445 GDG------------SFGVLGHGDRESLSVPKEVESLKGLRTVRAACGVWHTAAVVEVM 491
>gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa]
gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa]
Length = 1104
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 165/374 (44%), Gaps = 72/374 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + A +++ +ACG HT +T +G +Y G +F
Sbjct: 334 WGEESGGRLGHGVDSDVMHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNF 393
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G + G LG G
Sbjct: 394 GLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 452
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV------------TGGGKVLSWGAGGS 206
+ K I +P +VE L G+ T QAA G + AV GK+ +WG G
Sbjct: 453 DR--KSISLPKEVESLKGLRTVQAACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDK 510
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L F AC
Sbjct: 511 GRLGHGDKEAKL---------VPTCVAAL-------VEPNFCQVAC-------------- 540
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
H+ + + G +YT GS G LG D P RV+G S+S V+++
Sbjct: 541 ---------GHSLTVARTTSGHVYTMGSPVYGQLGNPLADG-KLPTRVEGKLSKSFVEEI 590
Query: 327 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 385
+CG H A + S+ ++ TWG G + G+LGHG+ D P++V ++ +
Sbjct: 591 ACGAYHVAVLTSKTEVYTWGKGAN------------GRLGHGDTDDRNSPSLVEALKDKQ 638
Query: 386 ALQVSCGFNHTGAL 399
++CG + T A+
Sbjct: 639 VKSIACGTSFTAAI 652
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 102/238 (42%), Gaps = 50/238 (21%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P +E + + A G + + VT G++ SWG GRLGHG +S ++
Sbjct: 300 FPKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVM-------- 351
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
P+LI L +++ A G H+ + +G +Y +GD + L GN
Sbjct: 352 -HPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN---------- 400
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 345
E+ W P+RV GP V +SCG HTA + S G++ T+G
Sbjct: 401 -EVSHW-----------------VPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 442
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
GTF G LGHG+ P V + ++ +Q +CG HT A++E +
Sbjct: 443 ----DGTF--------GVLGHGDRKSISLPKEVESLKGLRTVQAACGVWHTAAVIEVM 488
>gi|413951295|gb|AFW83944.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 1131
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 165/374 (44%), Gaps = 72/374 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + A +++ +ACG HT +T +G +Y G F
Sbjct: 373 WGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 432
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG +I + + P ++G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 433 GLLGHGNDISHWV-PKHVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHG 491
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + I +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 492 DRES--ISVPREVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDK 549
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + P+L+ V+ F AC
Sbjct: 550 GRLGHGDKG-------------PKLVPTCVAALVE---PNFCQVAC-------------- 579
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
H +L + G +YT GS G LG D + P RV+G ++ V+++
Sbjct: 580 ---------GHCLTVALTTSGHVYTMGSAVYGQLGNAQADGM-LPVRVEGKLHKNFVEEI 629
Query: 327 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 385
SCG H A + S+ ++ TWG G + G+LGHG+ D PT+V ++ +
Sbjct: 630 SCGAYHVAVLTSKTEVYTWGKGAN------------GRLGHGDTDDKNTPTLVEALKDKQ 677
Query: 386 ALQVSCGFNHTGAL 399
V CG N T A+
Sbjct: 678 VRIVVCGINFTAAI 691
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 125/302 (41%), Gaps = 71/302 (23%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL + ++ +V IS G H++ +T GE+Y WG+ S G+LG G + P ++
Sbjct: 341 KPLEFA-VRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VSQPKLIDA 397
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
LS + + A G + AVT G + +WG G G LGHG + S + P+
Sbjct: 398 LSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGND---------ISHWVPKH 448
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
+ LEG+ V + G H+A + G+++ FGD +
Sbjct: 449 VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSF----------------------- 485
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------------ 338
G LG G + + P V+ V + +CG HTAA+ E
Sbjct: 486 -------GVLGHGDRESISVPREVESLKGLRTV-RAACGVWHTAAVVEVMAGNSSSSNCS 537
Query: 339 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
GKI TWG G G+LGHG+ + PT V QV+CG T
Sbjct: 538 SGKIFTWGDGDK------------GRLGHGDKGPKLVPTCVAALVEPNFCQVACGHCLTV 585
Query: 398 AL 399
AL
Sbjct: 586 AL 587
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 103/239 (43%), Gaps = 52/239 (21%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + + G + VT G++ SWG GRLGHG + +
Sbjct: 339 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDV--------- 389
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
P+LI L + +++ A G H+ + +G +Y +GD
Sbjct: 390 SQPKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGD---------------------- 427
Query: 287 GELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTW 344
G+ + G LG G+ D+ H P+ V GP V +SCG HTA + S G++ T+
Sbjct: 428 ------GTFKFGLLGHGN-DISHWVPKHVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 480
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
G G S G LGHG+ P V + ++ ++ +CG HT A++E +
Sbjct: 481 GDG------------SFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAVVEVM 527
>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
Length = 1054
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 157/334 (47%), Gaps = 40/334 (11%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G LGLG +E + P + + + ++ +ACG +T+ +T+ G VY+ G ND
Sbjct: 4 WGSTIHGELGLGGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGNNDH 63
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + G L ISG+ + + G H+ + G+L+ WG N GQLGL +
Sbjct: 64 GQLG--QEKGRKRLQL-ISGIDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVEGQLGLDR 120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+A I P V+ L Q A G + S+A+T G++ +WG+ G+LG G ++ +
Sbjct: 121 VSA-TIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGSDTKM-- 177
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
E P+L+ L V + A G H+ I ++G V+ +G ++ + +
Sbjct: 178 ------ELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQNRN 231
Query: 280 RPS----------------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
P L G ++T G+ G LG G+ P ++
Sbjct: 232 VPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTSEILPRQIM-E 290
Query: 318 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 349
S V Q+SCG +HT A+ S G++ WG GG+
Sbjct: 291 LMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGA 324
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 96/175 (54%), Gaps = 12/175 (6%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ G+LGLGS + +P + + + +ACGG HT+ ++++G V+A G N FG
Sbjct: 161 WGSNSDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFG 220
Query: 102 QLGISE----NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG+S+ N+ L LR S V + G S +T+DG ++ G GQLG
Sbjct: 221 QLGLSDIQNRNVPCQLRTLRNS----RVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGH 276
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGH 211
G K ++++P ++ L G Q + G ++A V G+V +WG GG+G+LG+
Sbjct: 277 GNKTSEILP--RQIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLGN 329
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 144/351 (41%), Gaps = 101/351 (28%)
Query: 101 GQLGI----SENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LG+ ENI P ++ K E+ QI+ G +++ A+T +G++Y G N +GQL
Sbjct: 10 GELGLGGIEDENI---FTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGNNDHGQL 66
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G +K K + + + ++ L+ ++AA G ++ V G++ SWG+ G+LG + S
Sbjct: 67 G-QEKGRKRLQLISGIDPLA---FRKAACGSSHTLVVNEWGQLFSWGSNVEGQLGLDRVS 122
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ + PR++K L G K+ + A G HS + NG
Sbjct: 123 ATIR--------EPRMVKTL-GTKIIVQIACGLKHSIALTNNG----------------- 156
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
ELY WGSN +G LG+GS + ++ + P+ V+CG HT
Sbjct: 157 -------------ELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTI 203
Query: 335 AISE-GKILTWGWGGSHGTFSEDGHSS--------------------------------- 360
IS+ G + WG TF + G S
Sbjct: 204 VISKSGAVFAWG----RNTFGQLGLSDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFLTM 259
Query: 361 -----------GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
GQLGHGN I P + Q+SCG HT AL+
Sbjct: 260 DGGVFTCGAGMYGQLGHGNKTSEILPRQIMELMGSTVTQISCGRRHTLALV 310
>gi|291407336|ref|XP_002719873.1| PREDICTED: retinitis pigmentosa GTPase regulator-like [Oryctolagus
cuniculus]
Length = 882
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 150/308 (48%), Gaps = 45/308 (14%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K +ACG HTL TE G VYATG N+ G
Sbjct: 58 MFGSNNWGQLGLGSKTTINKPTCVKALKPEKVKYVACGRNHTLVSTEEGNVYATGGNNDG 117
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + G + P+ + ++ Q+S G + S+A+T +GEL+MWG NS GQ+GL K
Sbjct: 118 QLGLGDTEGRNTFYPISFFTSQHKIKQLSAGSNTSAALTENGELFMWGDNSEGQIGL--K 175
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P +V G + G+ S VT G++ ++G +G+LG +E I
Sbjct: 176 NVTNVCVPHQVTI--GKPISWISCGYYHSAFVTMDGELYTFGECENGKLGLPEELLI--- 230
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ TP+L+ + +++A G G + + V
Sbjct: 231 ----NHKTPQLVTRIPEKVIQVACGG----------GHTVVLTETIV------------- 263
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-G 339
YT+G + G LG+G+ S + + + +SCG HTA I+E G
Sbjct: 264 ---------YTFGLGQFGQLGLGTFIFETSEPKAIEYIKDHKISSISCGENHTALITELG 314
Query: 340 KILTWGWG 347
++ T+G G
Sbjct: 315 RMYTFGDG 322
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 142/324 (43%), Gaps = 50/324 (15%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + +S G H++ +T + +LYM+G N+ GQLGLG
Sbjct: 17 FGKTKFAENI-----PSKFWFKNDVPTYLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGS 71
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K I PT V+ L K A G ++ T G V + G G+LG G
Sbjct: 72 KT--TINKPTCVKALKPEKVKYVACGRNHTLVSTEEGNVYATGGNNDGQLGLGDTEGRNT 129
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F S +T + K+K +AG SA + ENG ++++GD + ++ + +
Sbjct: 130 FY-PISFFTSQH-------KIKQLSAGSNTSAALTENGELFMWGDNSEGQIGLKNVTNVC 181
Query: 280 RPSLIS--------------------GGELYTWGSNENGCLGIG-SIDVLHSPERVQGPF 318
P ++ GELYT+G ENG LG+ + + H ++
Sbjct: 182 VPHQVTIGKPISWISCGYYHSAFVTMDGELYTFGECENGKLGLPEELLINHKTPQLVTRI 241
Query: 319 SESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTI 377
E V QV+CG HT ++E + T+G G GQLG G + + P
Sbjct: 242 PEK-VIQVACGGGHTVVLTETIVYTFGLG------------QFGQLGLGTFIFETSEPKA 288
Query: 378 VNFGENVKALQVSCGFNHTGALLE 401
+ + ++ K +SCG NHT + E
Sbjct: 289 IEYIKDHKISSISCGENHTALITE 312
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 17/83 (20%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT----G 96
+G+G YG+LGLG + +++ P +C F + ++ +ACGG H + ++AT
Sbjct: 319 FGDGRYGKLGLGLENFTNQFVPTLCCDFLRFMIQLVACGGCHMV-------IFATPRLGS 371
Query: 97 LNDFGQLGISENIGYSLEPLRIS 119
N+F +S+ YS PL S
Sbjct: 372 ANEF----VSDEPNYSYFPLSSS 390
>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
Length = 657
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 134/283 (47%), Gaps = 50/283 (17%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG+ +G+LG G K +P T L+G G + AV+ G + +W
Sbjct: 26 GGVYTWGRGDDGRLGHGDNGWKYVPRLT--HSLAGQVITHVTCGSYHTAAVSSKGNLFTW 83
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G G+LGHG ES TP+ + L G+ V A G H+A + G +Y
Sbjct: 84 GGGMYGKLGHGNES---------GHSTPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYT 134
Query: 262 FGDR--AVDKMLFQEGNHARRPSLI----------------------SGGELYTWGSNEN 297
+GD+ V EG H P L+ GE+YTWG +
Sbjct: 135 WGDKENGVAGHGDTEG-HQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKF 193
Query: 298 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSED 356
G LG G+ HSP V+ + PV Q+SCG H+A ++ +GK+ T+G GG H
Sbjct: 194 GRLGHGAERNCHSPRLVETLLGKRPV-QISCGGFHSAVVTADGKMYTFG-GGEH------ 245
Query: 357 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
GQLGHG+ V+ + PT+V + V Q++CG++H+ AL
Sbjct: 246 -----GQLGHGDKVNKVKPTLVKDLDGVFLTQITCGWSHSVAL 283
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 162/363 (44%), Gaps = 60/363 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD GRLG G ++ P + + + + CG HT ++ G ++ G +G+
Sbjct: 31 WGRGDDGRLGHGDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLFTWGGGMYGK 90
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG G+S P R+ L VV I+ G H++ +T G LY WG NG G G
Sbjct: 91 LGHGNESGHS-TPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKENGVAGHGDTE 149
Query: 162 AKVIPIPTKVECLSGIFTKQ-AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P +E LSG Q +A GF +T G+V +WG G GRLGHG E +
Sbjct: 150 GHQY-TPKLLERLSGKRVVQLSACGFHTG-CLTDAGEVYTWGEGKFGRLGHGAERNC--- 204
Query: 221 LRSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
++PRL++ L G + V+I+ GF HSA + +G++Y FG ++ + +
Sbjct: 205 ------HSPRLVETLLGKRPVQISCGGF-HSAVVTADGKMYTFGGGEHGQLGHGDKVNKV 257
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SE 338
+P+L+ + + G F + Q++CGW H+ A+ S
Sbjct: 258 KPTLV---------------------------KDLDGVF----LTQITCGWSHSVALTSS 286
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ TWG G H G+LGHG P +V K + V+ HT
Sbjct: 287 HEVYTWG-NGDH-----------GKLGHGCGKKVSTPQLVEKLVGQKVVCVASYNEHTAC 334
Query: 399 LLE 401
L+E
Sbjct: 335 LVE 337
>gi|195996231|ref|XP_002107984.1| hypothetical protein TRIADDRAFT_52018 [Trichoplax adhaerens]
gi|190588760|gb|EDV28782.1| hypothetical protein TRIADDRAFT_52018 [Trichoplax adhaerens]
Length = 347
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 146/326 (44%), Gaps = 43/326 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFL----TETGCVYATGLND 99
G YG+LGLG + + P K + GG H++FL ETG +YA G N+
Sbjct: 31 GANSYGQLGLGHTDDKITPQKMPNL-NFKPKWIGGGGGHSVFLDVYVAETGELYACGWNN 89
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+ ++ L+ L + +++ G++H+ A++V+G+LY WG N+ GQLG
Sbjct: 90 NGQLGLEHQ--DNVTRLQKLSLPIRMQKVACGWNHTIALSVEGKLYSWGSNAFGQLGHSP 147
Query: 160 KA-AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ +I PT +E +S G + AV G+ SWGA G+LG G+ I+
Sbjct: 148 CSRGSIINTPTLIEDISDREFIDTCAGLRHTHAVEACGQTWSWGACKKGQLGIGERMDIV 207
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P LI L G++VK AG HSAC+ E G V+ +G + + +
Sbjct: 208 --------EKPVLISTLRGIRVKKVVAGSYHSACLTECGEVFCWGSNRYGQCTLADKTES 259
Query: 279 RRP------------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
P +++ GG +Y+WG + G LG + S
Sbjct: 260 LIPVKISSESCVNKCFIDIHSGWSHVVAVVEGGIVYSWGRCDYGQLGYTELSDGDSKRYQ 319
Query: 315 QGPFSES---PVDQVSCGWKHTAAIS 337
Q P + Q++CG +H IS
Sbjct: 320 QEPACVPNLHDLRQIACGSEHNIVIS 345
>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
Length = 1042
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 160/362 (44%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G LGLG +E + P FE S+ A G HTLFLT+ G VY+ G ND+
Sbjct: 4 WGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGSNDY 63
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + P +SGL ++ ++ G HS A++ GE++ WG ++ GQLG +
Sbjct: 64 GQLGHDQP---RKRPQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWGSDNYGQLG-HQ 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ L+ Q A G SVA+T G++ WGA G+LG G
Sbjct: 120 LGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGANDFGQLGLGT------ 173
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ E TP + L G+ + A G H+ + ++G V FG
Sbjct: 174 --ITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAV--FG---------------- 213
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
WG N NG LG+ P +++ S V +SCG + + ++ +
Sbjct: 214 ------------WGKNINGQLGLNDTVSKKFPTQLRT-LRNSRVRFISCGDEFSTFLTLD 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + + G G GQLGHG + I P V Q+SCG H+ A
Sbjct: 261 GGVFSCGAGMY------------GQLGHGGTSNEILPRQVLELMGSTITQISCGRQHSLA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 116/272 (42%), Gaps = 45/272 (16%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++ WG +G+LGLG + + P ++ +AALG ++ +T GKV S G+
Sbjct: 1 MFGWGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGS 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH Q P+L+ L+ + A G +HS + G V+ +G
Sbjct: 61 NDYGQLGHDQPRK-----------RPQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWG 109
Query: 264 D--------------RAVDKMLFQEGNHA-------RRPS--LISGGELYTWGSNENGCL 300
+ V K++ + +R S L + GE++ WG+N+ G L
Sbjct: 110 SDNYGQLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGANDFGQL 169
Query: 301 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 360
G+G+I S S P ++CG HT A+S+ + +GW G +
Sbjct: 170 GLGTITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAV-FGW----------GKNI 218
Query: 361 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
GQLG + V PT + N + +SCG
Sbjct: 219 NGQLGLNDTVSKKFPTQLRTLRNSRVRFISCG 250
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 85/163 (52%), Gaps = 6/163 (3%)
Query: 42 LWGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+WG D+G+LGLG++ P + +ACG HT ++++G V+ G N
Sbjct: 160 VWGANDFGQLGLGTITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGWGKNIN 219
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+++ + P ++ L+ V+ IS G S+ +T+DG ++ G GQLG G
Sbjct: 220 GQLGLNDTVSKKF-PTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGHGG 278
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSW 201
+ ++ +P +V L G Q + G + S+A V G+V S+
Sbjct: 279 TSNEI--LPRQVLELMGSTITQISCGRQHSLAFVPSRGRVYSY 319
>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
Length = 389
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 138/301 (45%), Gaps = 46/301 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 131 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 190
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 191 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 248
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 249 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 305
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 306 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 336
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 337 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 387
Query: 340 K 340
K
Sbjct: 388 K 388
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 168/385 (43%), Gaps = 59/385 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 25 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 82
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 83 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 140
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 141 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 195
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 196 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 249
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 250 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 309
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 310 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 356
Query: 372 YIHPTIVNFGENVKALQVSCGFNHT 396
P +V + K +V+CG HT
Sbjct: 357 IQRPRLVAALQGKKVNRVACGSAHT 381
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 20 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 77
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 78 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 120
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 121 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 160
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 161 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 207
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 208 LQGHRVVDIACG 219
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 65/142 (45%), Gaps = 9/142 (6%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGI----CKRWISSTLQRRFAAL-WGNGDYGRLGLGSL 56
LGR + K +K D G LG+ C S L + A WG GDY RLG GS
Sbjct: 245 LGRGGSDGCKVPMKIDSLTG--LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 302
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
+ RP + + A+A G H + TE G VY G ND GQLG P
Sbjct: 303 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ-RPR 361
Query: 117 RISGLK-KEVVQISTGYHHSSA 137
++ L+ K+V +++ G H+ A
Sbjct: 362 LVAALQGKKVNRVACGSAHTLA 383
>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4628
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 147/301 (48%), Gaps = 29/301 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T +G ++ G +G+
Sbjct: 3868 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGR 3927
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 3928 LGHGDSED-QLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG- 3985
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 3986 -GSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4042
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+GR+ + FQ G
Sbjct: 4043 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGRIKV----------FQWG--LP 4083
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
R SL GE+YTWG N+ G LG G+ + + P R+ +++V+CG HT + S
Sbjct: 4084 RWSL-GLGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACGSAHTLSWSTS 4141
Query: 340 K 340
K
Sbjct: 4142 K 4142
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 139/303 (45%), Gaps = 44/303 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y+ GL ++G+
Sbjct: 2842 WGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 2901
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
LG +N L L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 2902 LGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-- 2959
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 2960 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV--- 3016
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P++++ L G K+ A G LH + + G+VY
Sbjct: 3017 ------RKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVY-------------------- 3050
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
WG N++G G G+ V P VQG + +V+CG H+ A +
Sbjct: 3051 ----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTVD 3099
Query: 341 ILT 343
+ T
Sbjct: 3100 VTT 3102
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 154/337 (45%), Gaps = 50/337 (14%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2732 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEAT 2791
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + IPIP ++ LS K+ A+ G ++A+T GKV SWG G G+L
Sbjct: 2792 NGRLGLGLSSG-TIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 2850
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G +
Sbjct: 2851 GH--------FSRMNCD-KPRLIEALKAKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 2901
Query: 270 MLFQEGNHARRPSLI------------------------SGGELYTWGSNENGCLGIGSI 305
+ + RP L+ G +++WG + G LG G
Sbjct: 2902 LGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2961
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 364
+ + P+ ++ + V Q+ CG + + A+++ G + TWG G +L
Sbjct: 2962 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3008
Query: 365 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GHG DV P +V K + V+ G H A+ +
Sbjct: 3009 GHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTD 3045
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 156/353 (44%), Gaps = 49/353 (13%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYS----LEPLRISGLKKEVVQISTGYH 133
GG TLF +T G +YATG G+LGI S LE ++ ++K V +++G
Sbjct: 3797 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRK--VAVNSGGK 3854
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H A++ +GE+Y WG+ +G+LG G ++ P +E L G+ A G S +T
Sbjct: 3855 HCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIAAGGAHSACIT 3912
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSA 251
G++ +WG G GRLGHG S + P+L+ L+G +V A +G +
Sbjct: 3913 ASGELFTWGKGRYGRLGHGD---------SEDQLKPKLVDALQGHRVIDVACGSGDAQTL 3963
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRP----------------------SLISGGEL 289
C+ ++ V+ +GD K+ + + P +L G +
Sbjct: 3964 CLTDDDMVWSWGDGDYGKLGRGGSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTKSGAV 4023
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG---KILTWG- 345
YTWG + LG GS D + P +VQG V ++ G H +E K+ WG
Sbjct: 4024 YTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGRIKVFQWGL 4082
Query: 346 --WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
W G G + GQLG G P +V + K +V+CG HT
Sbjct: 4083 PRWSLGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4135
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 162/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G +YA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2770 GGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRH 2829
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 2830 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKAKRIRDIACGSSHSAAITS 2887
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ SWG G GRLGHG +T++ P+L+K L G +V A G +
Sbjct: 2888 SGELYSWGLGEYGRLGHGD---------NTTQLRPKLVKVLLGHRVIQVACGSRDAQTLA 2938
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 2939 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2998
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG G+ + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 2999 TWGKGDYFRLGHGTDVHVRKPQMVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWG---- 3053
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3054 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3094
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 122/267 (45%), Gaps = 43/267 (16%)
Query: 62 PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
P++ + + LA G H L L+ G V++ G D G+LG + Y EP I+
Sbjct: 447 PMLIHSLSSRKMVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTT-YLEEPTMIA 505
Query: 120 GLK-----KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
K VV I+ G +S+AITVDGELY WG+ + G+LG G + P+ V L
Sbjct: 506 AFNGKQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPM--LVTAL 563
Query: 175 SGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
G+ A G Q++AVT G+V SWG G G+LG G S TP+L+
Sbjct: 564 KGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLV 614
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI-------- 284
++L+ + + G S + ++G+VY +G ++ H R P L+
Sbjct: 615 EKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKV 674
Query: 285 --------------SGGELYTWGSNEN 297
GE+++WGSN+
Sbjct: 675 VDVAVGSTHCLALTDDGEVHSWGSNDK 701
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 111/228 (48%), Gaps = 19/228 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + +AF KH + +ACG ++ +T G +Y G
Sbjct: 482 WGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVVH-IACGSTYSAAITVDGELYTWGR 540
Query: 98 NDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
++G+L G SE+ + + GLK V +G + A+T +G+++ WG G+L
Sbjct: 541 GNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKL 600
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + P VE L + + G + SVA+T G+V +WG G + RLGHG +
Sbjct: 601 GRG--GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDE 658
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L+ L+G KV A G H + ++G V+ +G
Sbjct: 659 HV---------RFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWG 697
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E + P++ +A + + +ACG A TL +TE G V++ G D+
Sbjct: 538 WGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDY 597
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + G L ++V++ G S A+T DG++Y WGK N +LG G
Sbjct: 598 GKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD 657
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + P ++ L G A+G +A+T G+V SWG+
Sbjct: 658 --EHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSN 699
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 149/351 (42%), Gaps = 77/351 (21%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + + + C L L+ +G VY +L P+ I L
Sbjct: 405 PIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYTQNYK-----------STTLAPMLIHSL 453
Query: 122 K-KEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+++V+++ H A++ +GE++ WG G+LG G + PT + +G
Sbjct: 454 SSRKMVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTT--YLEEPTMIAAFNG-- 509
Query: 179 TKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
KQA A G S A+T G++ +WG G GRLGHG S + TP L
Sbjct: 510 -KQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGS---------SEDQTTPML 559
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYT 291
+ L+G+KV A G GD A+ ++ G++++
Sbjct: 560 VTALKGLKVVDVACGS---------------GD-------------AQTLAVTENGQVWS 591
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSH 350
WG + G LG G D +P+ V+ + + +V CG + + A++ +G++ TWG G +
Sbjct: 592 WGDGDYGKLGRGGSDGCKTPKLVEK-LQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQ 650
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHG D P +++ + K + V+ G H AL +
Sbjct: 651 ------------RLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTD 689
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 114/258 (44%), Gaps = 52/258 (20%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2724 SAGTIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2781
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GK+ + G +GRLG G S + PR I L VK A +HS
Sbjct: 2782 GKIYACGEATNGRLGLGLSSGTIPI--------PRQITALSNYVVKKVA---VHSG---- 2826
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 2827 -------------------GRHAM--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 2865
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AAI S G++ +WG G G+LGHG++ +
Sbjct: 2866 A-LKAKRIRDIACGSSHSAAITSSGELYSWGLG------------EYGRLGHGDNTTQLR 2912
Query: 375 PTIVNFGENVKALQVSCG 392
P +V + +QV+CG
Sbjct: 2913 PKLVKVLLGHRVIQVACG 2930
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 113/252 (44%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3757 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYAT 3814
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V F+ ++ G+ +
Sbjct: 3815 GYGAGGRLGIGGTESV---------STPTLLESIQHV--------FIRKVAVNSGGKHCL 3857
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 3858 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVE 3897
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD ++ G H+A I+ G++ TWG G G+LGHG+ D + P +V+
Sbjct: 3898 VVD-IAAGGAHSACITASGELFTWGKG------------RYGRLGHGDSEDQLKPKLVDA 3944
Query: 381 GENVKALQVSCG 392
+ + + V+CG
Sbjct: 3945 LQGHRVIDVACG 3956
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY G D +
Sbjct: 592 WGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQR 651
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
L G E++ + P + L+ K+VV ++ G H A+T DGE++ WG N Q L
Sbjct: 652 LGHGTDEHVRF---PKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSNDKLQHFDTL 708
Query: 156 GLGKKAAKVIP 166
KK K +P
Sbjct: 709 FSNKKQPKALP 719
>gi|313221348|emb|CBY32102.1| unnamed protein product [Oikopleura dioica]
Length = 1199
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 157/361 (43%), Gaps = 59/361 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG DYG+LGLGS E+ S+ ++A G HT++LT T VY+ G N+FGQ
Sbjct: 4 WGKNDYGQLGLGS-ENMLISCPSPIDANQSVISIASGLRHTVYLTSTRKVYSCGSNEFGQ 62
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ P ++G +E+ ++ G S AI G L+ WG++ NG+L + +
Sbjct: 63 LGQQKS---QCRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMCKQDS 119
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ K+ S + Q A G + +A+T G +LSWG+ G+LG G SS + FL
Sbjct: 120 LHEPKLLDKIMHWSVV---QVACGAQHCIALTEEGTILSWGSNTQGQLGLG--SSEIEFL 174
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P +I L + AG HS + P
Sbjct: 175 E------PTIIASLNAFPISQICAGAYHSGVLS--------------------------P 202
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GK 340
S G L+TWG N G LG G+ D S R+ V V+ G +H+ + G
Sbjct: 203 S----GTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGG 258
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
+ +WG GG+ GQLGH + + P + Q+ CG HT +L
Sbjct: 259 VFSWGHGGN------------GQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISLT 306
Query: 401 E 401
+
Sbjct: 307 D 307
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 111/243 (45%), Gaps = 12/243 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G L + +S P + S+ +ACG H + LTE G + + G N GQ
Sbjct: 105 WGRSLNGEL-MCKQDSLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQ 163
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + LEP I+ L + QI G +HS ++ G L+ WGKN+ GQLG G
Sbjct: 164 LGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSD 223
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P V+ L A+G E SV T G V SWG GG+G+LGH +++
Sbjct: 224 S-FQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMANVT--- 279
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P+ I EL G V G H+ + + ++ FG + +++ AR P
Sbjct: 280 ------QPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLGTHNDTSARLP 333
Query: 282 SLI 284
I
Sbjct: 334 ITI 336
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 51/277 (18%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WGKN GQLGLG + +I P+ ++ + + A G +V +T KV S G+
Sbjct: 1 MYGWGKNDYGQLGLGSENM-LISCPSPIDANQSVIS--IASGLRHTVYLTSTRKVYSCGS 57
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LG + S+ P L+ ++ AAG S I E+G ++ +G
Sbjct: 58 NEFGQLGQQK-----------SQCRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWG 106
Query: 264 DRAVDKMLFQEGNHARRPSLISG----------------------GELYTWGSNENGCLG 301
R+++ L + + P L+ G + +WGSN G LG
Sbjct: 107 -RSLNGELMCKQDSLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLG 165
Query: 302 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 360
+GS ++ + + P+ Q+ G H+ +S G + TW G ++
Sbjct: 166 LGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTW------------GKNN 213
Query: 361 GGQLGHGN-DVDYIHPTIVNFGENVKALQVSCGFNHT 396
GQLGHGN D P +V + + + V+ G H+
Sbjct: 214 WGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHS 250
>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
Length = 1016
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 157/336 (46%), Gaps = 61/336 (18%)
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIS 129
++L A G H+L L G V + G N GQLG + +P RI L+ V +S
Sbjct: 23 NTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG-RKGTPRGEQPERIPALETLNVALVS 81
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G HS A+ G ++ WG S GQLG+G+ IP K++ L+GI Q A G S
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTF-IPKKIKTLAGIKIIQVACGHYHS 140
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VA++ G+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG H
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGHH 192
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHA--RRPSLISGGELYTWGSNENGCLGIGSIDV 307
S + +G + +G + ++ GN+A +R +S G L T G
Sbjct: 193 SFALSLSGTSFGWGSNSAGQLALS-GNNAPVQRYKPVSIGALKTLG-------------- 237
Query: 308 LHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGH 366
V +SCG+KHTA ++ +GK+ T+ G +S GQLGH
Sbjct: 238 ---------------VVSISCGYKHTAVLTQDGKVFTF------------GDNSYGQLGH 270
Query: 367 GNDVDYIHPTIVNFGENVKAL--QVSCGFNHTGALL 400
+ P +V E ++ L Q+ CG +HT A +
Sbjct: 271 DPTAEKRGPQLV---ERIEGLVSQIDCGSDHTLAYI 303
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 144/307 (46%), Gaps = 42/307 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG +P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E + P +I L +++Q++ G++HS A++ DG+++ WG NS+GQLGLGK+
Sbjct: 108 GIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQL------ALSGNNA 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + ++G+V+ FGD + ++ R P
Sbjct: 221 PVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQ 280
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGK 340
L+ ER++G V Q+ CG HT A + G+
Sbjct: 281 LV---------------------------ERIEG-----LVSQIDCGSDHTLAYIYTTGQ 308
Query: 341 ILTWGWG 347
++++G G
Sbjct: 309 VVSFGRG 315
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 126/281 (44%), Gaps = 56/281 (19%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
++Q ++G HHS + DG + G NS GQLG +K P ++ L + +
Sbjct: 25 LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG--RKGTPRGEQPERIPALETLNVALVSC 82
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E S+AV G+V +WGA G+LG G+ F +T + P+ IK L G+K+ A
Sbjct: 83 GKEHSLAVCHKGRVFAWGAASEGQLGIGE------FKETT--FIPKKIKTLAGIKIIQVA 134
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG- 303
G HS + E+G+V+ +WG+N +G LG+G
Sbjct: 135 CGHYHSVALSEDGQVF------------------------------SWGTNSHGQLGLGK 164
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
SP+RV+ P+ QV+ G H+ A+S ++GWG + S GQ
Sbjct: 165 EFPSQASPQRVRS-LEGIPLAQVAAGGHHSFALSLSGT-SFGWGSN----------SAGQ 212
Query: 364 L---GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
L G+ V P + + + + +SCG+ HT L +
Sbjct: 213 LALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQ 253
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 19/212 (8%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GG H+ L+ +G + G N G
Sbjct: 152 WGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAG 211
Query: 102 QLGISENIG--YSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N +P+ I LK VV IS GY H++ +T DG+++ +G NS GQLG
Sbjct: 212 QLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSW--GAGGSGRLGH-GQE 214
A K P VE + G+ + Q G + ++A + G+V+S+ G G + R H G E
Sbjct: 272 PTAEK--RGPQLVERIEGLVS-QIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGAE 328
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
SS + L S K+L V+VK AG
Sbjct: 329 SSDISCLVSA--------KDLADVQVKHIFAG 352
>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
Length = 4791
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 138/323 (42%), Gaps = 38/323 (11%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G +S P + + + +K +A GG H L L+ G VY+ G D G
Sbjct: 3990 GYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4049
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + Y L L E+V I+ G HHS+AIT G LY WGK G+LG G
Sbjct: 4050 KLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSD 4109
Query: 162 AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P VE L A G Q++ VT V SWG G G+LG G
Sbjct: 4110 DQL--RPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4161
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P I L G+ V G S + +G VY +G ++ +H R
Sbjct: 4162 ---SDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVR 4218
Query: 280 RPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
RP ++ GE++TWG N+ G LG G+ L P V
Sbjct: 4219 RPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHA- 4277
Query: 318 FSESPVDQVSCGWKHTAAISEGK 340
+ +V+CG HT A S K
Sbjct: 4278 LQGKKITRVACGSAHTLAWSTAK 4300
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 168/386 (43%), Gaps = 57/386 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P C + LA GG TLF +T G VY+TG G
Sbjct: 3937 WGHNHRGQLGGLEGAKIKLPAPCESLSALRPIQLA-GGEQTLFAVTADGKVYSTGYGAAG 3995
Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S + LE ++ +KK V +++G H A++ +G +Y WG+ +G+LG
Sbjct: 3996 RLGIGGTDSVMVPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4053
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L GI A G S A+T G + +WG G GRLGHG
Sbjct: 4054 GNRLS--YDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 4107
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P++++ L+ KV A +G + C+ ++ V+ +GD K+
Sbjct: 4108 -----SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4162
Query: 276 NHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + P +L G +YTWG + LG G+ D + P +
Sbjct: 4163 DGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRK 4222
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V + ++ G H A S+ G++ TW G + GQLG G
Sbjct: 4223 VAA-LQGKKIISIATGSLHCVACSDKGEVFTW------------GDNDEGQLGDGTTSAL 4269
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGA 398
P +V+ + K +V+CG HT A
Sbjct: 4270 QRPRLVHALQGKKITRVACGSAHTLA 4295
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 181/399 (45%), Gaps = 69/399 (17%)
Query: 13 YLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKH 71
+L D ++ + +R + Q+ +WG D +LG G S+ + PV K
Sbjct: 2926 FLASDWEVLQEQVTAQRSTDAPPQQSAVYVWGLNDKDQLG-GLKGSKIKIPVRSEVLSK- 2983
Query: 72 SLKAL-ACGGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-- 127
LK + GG+ TLF+ ++ G +YA G G+LG+ ++ EP I L + V++
Sbjct: 2984 -LKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDYNMC-EPKLIPFLSQYVIKKV 3041
Query: 128 -ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
+ +G H+ A+T DG+++ WG+ +G+LG G + P +E L + A G
Sbjct: 3042 AVHSGGKHALALTQDGKVFSWGEGEDGKLGHGN--CTTLDKPRLIESLKSKRIRDIACGS 3099
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S A+ G++ +WG G GRLGHG + ++ P+L++ L G +V
Sbjct: 3100 GHSAAIASNGELYTWGLGEYGRLGHGD---------TATQMKPKLVQALSGQRV------ 3144
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSID 306
+ AC G R M SL + G +YTWG + G LG G D
Sbjct: 3145 -VQVAC----------GSRDAQTM-----------SLTADGCVYTWGDGDFGKLGRGGSD 3182
Query: 307 VLHSP---ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 362
++P +R+ G V QV CG + + A+++ G++ TWG G
Sbjct: 3183 GCYTPLLVDRLNG----LGVVQVECGAQFSLALTKYGEVWTWGKGDYF------------ 3226
Query: 363 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHGND PT+V K + V+ G H A+ +
Sbjct: 3227 RLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTD 3265
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 136/296 (45%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + + + ++ +ACG H+ + G +Y GL ++G+
Sbjct: 3062 WGEGEDGKLGHGNCTTLDKPRLIESLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGR 3121
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGK 159
LG + ++P + L + VVQ++ G + ++T DG +Y WG G+LG G
Sbjct: 3122 LGHGDT-ATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTADGCVYTWGDGDFGKLGRGG 3180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P+ V+ L+G+ Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3181 SDGCYTPL--LVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV-- 3236
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P L++ L G K+ A G LH + + G+V
Sbjct: 3237 -------RKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQV-------------------- 3269
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
Y WG N++G G G+ V P V ++ +++VSCG H+ A
Sbjct: 3270 ----------YAWGDNDHGQQGNGTTIVNRKPSLVH-ELDDTRMNRVSCGSSHSIA 3314
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 141/334 (42%), Gaps = 87/334 (26%)
Query: 88 ETGCVYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
+ VY GLND QLG + + L+P+ I+G K + +S
Sbjct: 2949 QQSAVYVWGLNDKDQLGGLKGSKIKIPVRSEVLSKLKPIHIAGGSKTLFIVSQ------- 3001
Query: 138 ITVDGELYMWGKNSNGQLGLGKK----AAKVIPIPTKVECLSGIFTKQAAL--GFEQSVA 191
+G+LY G+ +NG+LGLG K+IP LS K+ A+ G + ++A
Sbjct: 3002 ---EGKLYACGEGTNGRLGLGDDYNMCEPKLIPF------LSQYVIKKVAVHSGGKHALA 3052
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+T GKV SWG G G+LGHG T+ PRLI+ L+ +++ A G HSA
Sbjct: 3053 LTQDGKVFSWGEGEDGKLGHGN---------CTTLDKPRLIESLKSKRIRDIACGSGHSA 3103
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSP 311
I NG ELYTWG E G LG G P
Sbjct: 3104 AIASNG------------------------------ELYTWGLGEYGRLGHGDTATQMKP 3133
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAIS---EGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
+ VQ S V QV+CG + +S +G + TWG G F G+LG G
Sbjct: 3134 KLVQA-LSGQRVVQVACGSRDAQTMSLTADGCVYTWG----DGDF--------GKLGRGG 3180
Query: 369 DVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 402
P +V+ + +QV CG + AL +Y
Sbjct: 3181 SDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKY 3214
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 101/207 (48%), Gaps = 13/207 (6%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
G H L LT+ GCVY+ G D G+LG +NI + L + L+K ++ I+ G +S+A++
Sbjct: 518 GKHYLALTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIETLLEKNIIFIACGSTYSAALS 577
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGK 197
GELY WG+ + G+LG G + +PT V L G A G Q++ VT G
Sbjct: 578 ASGELYTWGRGNYGRLGHGSNDD--VTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASGI 635
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V SWG G G+LG G S TP+++ +L + V G SA + G
Sbjct: 636 VFSWGDGDYGKLGRGG---------SDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARG 686
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLI 284
VY +G ++ H R P LI
Sbjct: 687 EVYTWGKGDAYRLGHGNEEHVRYPKLI 713
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 150/339 (44%), Gaps = 55/339 (16%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLE-PLR-ISGLKKEVVQISTGYHHSSAITVDGELYM 146
+G +Y G N GQLG E L P +S L+ +Q++ G A+T DG++Y
Sbjct: 3931 SGAIYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRP--IQLAGGEQTLFAVTADGKVYS 3988
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAG 204
G + G+LG+G + +PT +E + +F K+ A+ G + +A++ G V SWG G
Sbjct: 3989 TGYGAAGRLGIG--GTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEG 4046
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LGHG L + R P+L+++L G+++ A G HSA I G +Y +G
Sbjct: 4047 DDGKLGHGNR---LSYDR------PKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGK 4097
Query: 265 RAVDKMLFQEGNHARRPSLISGGELY------------------------TWGSNENGCL 300
++ + + RP ++ + Y +WG + G L
Sbjct: 4098 GRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKL 4157
Query: 301 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHS 359
G G D P ++ + V +V CG + + A++ G + TWG G H
Sbjct: 4158 GRGGSDGCKVPLKIDS-LAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYH--------- 4207
Query: 360 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+LGHG D P V + K + ++ G H A
Sbjct: 4208 ---RLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA 4243
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 113/244 (46%), Gaps = 15/244 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNGD GRLG G S P + + ++ +ACG ++ L+ +G +Y G ++G+
Sbjct: 533 WGNGDGGRLGHGDNISHDEPKLIETLLEKNIIFIACGSTYSAALSASGELYTWGRGNYGR 592
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA--ITVDGELYMWGKNSNGQLGLGK 159
LG N ++ P ++ LK VV ++ G S +T G ++ WG G+LG G
Sbjct: 593 LGHGSNDDVTV-PTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGG 651
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P V+ L I + G + S A+T G+V +WG G + RLGHG E +
Sbjct: 652 SDGS--KTPKIVDKLLDINVVRVFCGGQFSAALTARGEVYTWGKGDAYRLGHGNEEHV-- 707
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+LI+ L K+K + G H + E+ VY +G ++ G
Sbjct: 708 -------RYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYGWGRNDYGQIDPTLGPVVS 760
Query: 280 RPSL 283
PSL
Sbjct: 761 EPSL 764
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 135/344 (39%), Gaps = 67/344 (19%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P C A + +K L C L L+ +G VY Q P R+
Sbjct: 456 PFYCDAIAELGIKHLCCTERALLILSLSGNVYIMYYGSETQY-----------PQRMHSF 504
Query: 122 KKEVVQISTGY---HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+ V + + H A+T DG +Y WG G+LG G + P +E L
Sbjct: 505 SDKPVTMIASHSDGKHYLALTQDGCVYSWGNGDGGRLGHGDNISH--DEPKLIETLLEKN 562
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
A G S A++ G++ +WG G GRLGHG + P L+ L+G
Sbjct: 563 IIFIACGSTYSAALSASGELYTWGRGNYGRLGHGSNDDV---------TVPTLVTTLKGH 613
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENG 298
V +H AC + + + + G +++WG + G
Sbjct: 614 MV-------VHVACGSGDSQTL---------------------CVTASGIVFSWGDGDYG 645
Query: 299 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDG 357
LG G D +P+ V + V +V CG + +AA++ G++ TWG G ++
Sbjct: 646 KLGRGGSDGSKTPKIVDKLLDINVV-RVFCGGQFSAALTARGEVYTWGKGDAY------- 697
Query: 358 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHGN+ +P ++ + K +S G H AL E
Sbjct: 698 -----RLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTE 736
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 58/126 (46%), Gaps = 11/126 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG G+ +P + + +A G H L +T+TG VYA G ND GQ
Sbjct: 3220 WGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ 3279
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSA-ITVDGE--------LYMWGKNSN 152
G I + +P + L + ++S G HS A I VD + ++
Sbjct: 3280 QGNGTTI-VNRKPSLVHELDDTRMNRVSCGSSHSIAWILVDQPTNGNQEPVTFQTARDPL 3338
Query: 153 GQLGLG 158
GQ+ LG
Sbjct: 3339 GQMCLG 3344
>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
Length = 980
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 157/336 (46%), Gaps = 61/336 (18%)
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIS 129
++L A G H+L L G V + G N GQLG + +P RI L+ V +S
Sbjct: 23 NTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG-RKGTPRGEQPERIPALETLNVALVS 81
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G HS A+ G ++ WG S GQLG+G+ IP K++ L+GI Q A G S
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTF-IPKKIKTLAGIKIIQVACGHYHS 140
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VA++ G+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG H
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGHH 192
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHA--RRPSLISGGELYTWGSNENGCLGIGSIDV 307
S + +G + +G + ++ GN+A +R +S G L T G
Sbjct: 193 SFALSLSGTSFGWGSNSAGQLALS-GNNAPVQRYKPVSIGALKTLG-------------- 237
Query: 308 LHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGH 366
V +SCG+KHTA ++ +GK+ T+ G +S GQLGH
Sbjct: 238 ---------------VVSISCGYKHTAVLTQDGKVFTF------------GDNSYGQLGH 270
Query: 367 GNDVDYIHPTIVNFGENVKAL--QVSCGFNHTGALL 400
+ P +V E ++ L Q+ CG +HT A +
Sbjct: 271 DPTAEKRGPQLV---ERIEGLVSQIDCGSDHTLAYI 303
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 144/307 (46%), Gaps = 42/307 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG +P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E + P +I L +++Q++ G++HS A++ DG+++ WG NS+GQLGLGK+
Sbjct: 108 GIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQL------ALSGNNA 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + ++G+V+ FGD + ++ R P
Sbjct: 221 PVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQ 280
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGK 340
L+ ER++G V Q+ CG HT A + G+
Sbjct: 281 LV---------------------------ERIEG-----LVSQIDCGSDHTLAYIYTTGQ 308
Query: 341 ILTWGWG 347
++++G G
Sbjct: 309 VVSFGRG 315
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 126/281 (44%), Gaps = 56/281 (19%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
++Q ++G HHS + DG + G NS GQLG +K P ++ L + +
Sbjct: 25 LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG--RKGTPRGEQPERIPALETLNVALVSC 82
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E S+AV G+V +WGA G+LG G+ F +T + P+ IK L G+K+ A
Sbjct: 83 GKEHSLAVCHKGRVFAWGAASEGQLGIGE------FKETT--FIPKKIKTLAGIKIIQVA 134
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG- 303
G HS + E+G+V+ +WG+N +G LG+G
Sbjct: 135 CGHYHSVALSEDGQVF------------------------------SWGTNSHGQLGLGK 164
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
SP+RV+ P+ QV+ G H+ A+S ++GWG + S GQ
Sbjct: 165 EFPSQASPQRVRS-LEGIPLAQVAAGGHHSFALSLSGT-SFGWGSN----------SAGQ 212
Query: 364 L---GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
L G+ V P + + + + +SCG+ HT L +
Sbjct: 213 LALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQ 253
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 19/212 (8%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GG H+ L+ +G + G N G
Sbjct: 152 WGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAG 211
Query: 102 QLGISENIG--YSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N +P+ I LK VV IS GY H++ +T DG+++ +G NS GQLG
Sbjct: 212 QLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSW--GAGGSGRLGH-GQE 214
A K P VE + G+ + Q G + ++A + G+V+S+ G G + R H G E
Sbjct: 272 PTAEK--RGPQLVERIEGLVS-QIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGAE 328
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
SS + L S K+L V+VK AG
Sbjct: 329 SSDISCLVSA--------KDLADVQVKHIFAG 352
>gi|301755558|ref|XP_002913646.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC6-like [Ailuropoda melanoleuca]
Length = 1189
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 156/333 (46%), Gaps = 63/333 (18%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
L+ A G H+L L G +++ G N GQLG + + P RI L V +S G
Sbjct: 25 LRQAASGERHSLLLLSNGELHSCGDNSQGQLG-RKGVQRDEHPKRIRTLDNLRVDLVSCG 83
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+ G ++ WG S GQLG+G + ++ IPTK++ L+GI Q + G S+A
Sbjct: 84 KEHSLAVCYKGRVFAWGAGSEGQLGVG-EFKEINLIPTKIKTLTGIKIIQVSCGHYHSLA 142
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ GG+V SWG+ G+LG G+E S+ +P+ ++ L+G+ + AAG HS
Sbjct: 143 LSEGGQVFSWGSNSHGQLGLGKECP--------SQASPQRVRSLDGIPLTQVAAGGAHSF 194
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVL--- 308
+ +SG + WGSN G L + +V
Sbjct: 195 ALS-----------------------------LSGAS-FGWGSNNAGQLALRQNNVPVQS 224
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
H P + G V +SCG++HTA +++ GK+ T+G G S+ GQLGH
Sbjct: 225 HKPRSI-GALKNLGVIYISCGYEHTAVLTQTGKVFTFG-GNSY-----------GQLGHS 271
Query: 368 NDVDYIHPTIVNFGENVKAL--QVSCGFNHTGA 398
+ P +V E + L Q+ CG HT A
Sbjct: 272 PTAEKEGPQLV---EGIDGLVSQIDCGSYHTLA 301
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 141/309 (45%), Gaps = 42/309 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG ++ P + + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSQGQLGRKGVQRDEHPKRIRTLDNLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ E +L P +I L +++Q+S G++HS A++ G+++ WG NS+GQLGLGK+
Sbjct: 108 GVGEFKEINLIPTKIKTLTGIKIIQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L Q +
Sbjct: 168 SQAS-PQRVRSLDGIPLTQVAAGGAHSFALSLSGASFGWGSNNAGQLALRQNNV------ 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ PR I L+ + V + G+ H+A + + G+V
Sbjct: 221 PVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQTGKV----------------------- 257
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGK 340
+T+G N G LG P+ V+G + V Q+ CG HT A + GK
Sbjct: 258 -------FTFGGNSYGQLGHSPTAEKEGPQLVEG--IDGLVSQIDCGSYHTLAYVYTTGK 308
Query: 341 ILTWGWGGS 349
++++G G S
Sbjct: 309 VVSFGRGPS 317
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 125/282 (44%), Gaps = 56/282 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E+ Q ++G HS + +GEL+ G NS GQLG +K + P ++ L + +
Sbjct: 24 ELRQAASGERHSLLLLSNGELHSCGDNSQGQLG--RKGVQRDEHPKRIRTLDNLRVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I P IK L G+K+
Sbjct: 82 CGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEI--------NLIPTKIKTLTGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G HS + E GG++++WGSN +G LG+G
Sbjct: 134 SCGHYHSLALSE------------------------------GGQVFSWGSNSHGQLGLG 163
Query: 304 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
SP+RV+ P+ QV+ G H+ A+S ++GWG ++ G
Sbjct: 164 KECPSQASPQRVRS-LDGIPLTQVAAGGAHSFALSLSGA-SFGWGSNN----------AG 211
Query: 363 QLG---HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QL + V P + +N+ + +SCG+ HT L +
Sbjct: 212 QLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQ 253
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 109/233 (46%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E P + ++CG H+L L+E G V++
Sbjct: 95 RVFA--WGAGSEGQLGVGEFKEINLIPTKIKTLTGIKIIQVSCGHYHSLALSEGGQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L + Q++ G HS A+++ G + WG N+ GQ
Sbjct: 153 GSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGGAHSFALSLSGASFGWGSNNAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + +P+ P + L + + G+E + +T GKV ++G G+LG
Sbjct: 213 LALRQNN---VPVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQTGKVFTFGGNSYGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
H + G P+L++ ++G+ +I + A + G+V FG
Sbjct: 270 HSPTAEKEG---------PQLVEGIDGLVSQIDCGSYHTLAYVYTTGKVVSFG 313
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 88/170 (51%), Gaps = 6/170 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ +G+LGLG S+ P + + L +A GGAH+ L+ +G + G N+ G
Sbjct: 152 WGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGGAHSFALSLSGASFGWGSNNAG 211
Query: 102 QLGISEN--IGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL + +N S +P I LK V+ IS GY H++ +T G+++ +G NS GQLG
Sbjct: 212 QLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQTGKVFTFGGNSYGQLGHS 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
A K P VE + G+ ++ + V GKV+S+G G S +
Sbjct: 272 PTAEK--EGPQLVEGIDGLVSQIDCGSYHTLAYVYTTGKVVSFGRGPSCK 319
>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
Length = 901
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 164/374 (43%), Gaps = 72/374 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + A +++ +ACG HT +T +G +Y G ++
Sbjct: 334 WGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNS 393
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 394 GLLGHGNEVSHWV-PKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG 452
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 453 DRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 510
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L F AC
Sbjct: 511 GRLGHGDKDTRL---------VPTCVAAL-------VEPNFCQIAC-------------- 540
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
H +L + G +YT GS G LG D + P RV+G ++ V+++
Sbjct: 541 ---------GHCMTVALTTSGHVYTMGSPVYGQLGNPQADGM-LPVRVEGKLHKNFVEEI 590
Query: 327 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 385
SCG H A + S ++ TWG G + G+LGHG+ D PT+V ++ +
Sbjct: 591 SCGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRSSPTLVEALKDKQ 638
Query: 386 ALQVSCGFNHTGAL 399
V CG N T A+
Sbjct: 639 VRTVVCGINFTAAI 652
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 126/302 (41%), Gaps = 71/302 (23%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL + +K +V IS G H++ +T GE+Y WG+ S G+LG G +P P ++
Sbjct: 302 KPLEFA-VKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCD--VPQPKLIDA 358
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ + + A G + AVT G + +WG G SG LGHG E S + P+
Sbjct: 359 LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNE---------VSHWVPKR 409
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
+ LEG+ V + G H+A + G+++ FGD +
Sbjct: 410 VNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSF----------------------- 446
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------------ 338
G LG G L P V+ V + +CG HTAA+ E
Sbjct: 447 -------GVLGHGDRQSLSVPREVESLKGLRTV-RAACGVWHTAAVVEVMVGNSSSSNCS 498
Query: 339 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
GKI TWG G G+LGHG+ + PT V Q++CG T
Sbjct: 499 SGKIFTWGDGDK------------GRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTV 546
Query: 398 AL 399
AL
Sbjct: 547 AL 548
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 104/241 (43%), Gaps = 56/241 (23%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
IP +E + + + G + VT G++ SWG GRLGHG + +
Sbjct: 300 IPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP-------- 351
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
P+LI L + +++ A G H+ +
Sbjct: 352 -QPKLIDALANMNIELVACGEYHTCAV------------------------------TLS 380
Query: 287 GELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 342
G+LYTWG ++ +G LG G+ +V H P+RV GP V +SCG HTA + S G++
Sbjct: 381 GDLYTWGNGTSNSGLLGHGN-EVSHWVPKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLF 439
Query: 343 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 402
T+G G S G LGHG+ P V + ++ ++ +CG HT A++E
Sbjct: 440 TFGDG------------SFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEV 487
Query: 403 V 403
+
Sbjct: 488 M 488
>gi|395541970|ref|XP_003772909.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC6 [Sarcophilus harrisii]
Length = 1032
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 155/348 (44%), Gaps = 57/348 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL-----KALACGGAHTLFLTETGCVYATGL 97
WG+ + +LG+ + R P V E SL ACG H+L L G V++ G
Sbjct: 5 WGDNSFRQLGINA-GRRASPRVVRCREGASLGGQQIVQAACGERHSLLLLADGTVWSCGN 63
Query: 98 NDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
N +GQLG +NI S P I L+ + VV +S G HS AI G +Y WG S GQLG
Sbjct: 64 NSYGQLG-RKNIKKSKRPAPIQALETQVVVSVSCGKEHSLAICKTGRIYSWGSGSRGQLG 122
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ K+ IP + LS Q + G S+A+T GKV SWG G+LG G
Sbjct: 123 I-KEVKDQCSIPKNIAALSRDKIIQVSCGHYHSIALTQDGKVFSWGDNDHGQLGLGT--- 178
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S+ +P+ + L+G+ + AAG HS + +G Y +G R + L G
Sbjct: 179 -----NFPSQASPQRVNSLDGIPLAQVAAGGSHSFALSLSGTSYGWG-RNKEGQLALSGK 232
Query: 277 HA----------------------------------RRPSLISGGELYTWGSNENGCLGI 302
+A R I+ G++ T+GSN +G LG
Sbjct: 233 NASVVSINYCIWHEAEALTCKRSNSIKEFQGLKELLNRSRQIADGKVLTFGSNNSGQLGH 292
Query: 303 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTA--AISEGKILTWGWGG 348
G I P+ V+ S Q++CG HT A + G++L++G G
Sbjct: 293 GLITKPRGPQIVE---SAELFSQIACGSHHTLAYACTSGQVLSFGCGS 337
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 142/348 (40%), Gaps = 70/348 (20%)
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLK------KEVVQISTGYHHSSAITVDGELYM 146
Y G N F QLGI N G P + + +++VQ + G HS + DG ++
Sbjct: 3 YCWGDNSFRQLGI--NAGRRASPRVVRCREGASLGGQQIVQAACGERHSLLLLADGTVWS 60
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
G NS GQLG +K K P ++ L + G E S+A+ G++ SWG+G
Sbjct: 61 CGNNSYGQLG--RKNIKKSKRPAPIQALETQVVVSVSCGKEHSLAICKTGRIYSWGSGSR 118
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD-- 264
G+LG + P+ I L K+ + G HS + ++G+V+ +GD
Sbjct: 119 GQLGIKEVKDQCSI--------PKNIAALSRDKIIQVSCGHYHSIALTQDGKVFSWGDND 170
Query: 265 -------------------RAVDKMLFQE----GNHARRPSLISGGELYTWGSNENGCLG 301
++D + + G+H+ SL G Y WG N+ G L
Sbjct: 171 HGQLGLGTNFPSQASPQRVNSLDGIPLAQVAAGGSHSFALSL--SGTSYGWGRNKEGQLA 228
Query: 302 IG-------SID--VLHSPERVQGPFSES--PVDQVSCGWKHTAAISEGKILTWGWGGSH 350
+ SI+ + H E + S S + + I++GK+LT+G S
Sbjct: 229 LSGKNASVVSINYCIWHEAEALTCKRSNSIKEFQGLKELLNRSRQIADGKVLTFGSNNS- 287
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
GQLGHG P IV E Q++CG +HT A
Sbjct: 288 -----------GQLGHGLITKPRGPQIVESAELFS--QIACGSHHTLA 322
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 106/264 (40%), Gaps = 65/264 (24%)
Query: 145 YMWGKNSNGQLGL--GKKAAKVIPIPTKVEC-----LSGIFTKQAALGFEQSVAVTGGGK 197
Y WG NS QLG+ G++A+ P V C L G QAA G S+ + G
Sbjct: 3 YCWGDNSFRQLGINAGRRAS-----PRVVRCREGASLGGQQIVQAACGERHSLLLLADGT 57
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V S G G+LG ++ + P I+ LE V + G HS I + G
Sbjct: 58 VWSCGNNSYGQLGRKN-------IKKSKRPAP--IQALETQVVVSVSCGKEHSLAICKTG 108
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
R+Y +WGS G LGI + S +
Sbjct: 109 RIY------------------------------SWGSGSRGQLGIKEVKDQCSIPKNIAA 138
Query: 318 FSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG-NDVDYIHP 375
S + QVSCG H+ A+++ GK+ +WG ++ H GQLG G N P
Sbjct: 139 LSRDKIIQVSCGHYHSIALTQDGKVFSWG---------DNDH---GQLGLGTNFPSQASP 186
Query: 376 TIVNFGENVKALQVSCGFNHTGAL 399
VN + + QV+ G +H+ AL
Sbjct: 187 QRVNSLDGIPLAQVAAGGSHSFAL 210
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 56/121 (46%), Gaps = 15/121 (12%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKI 341
L++ G +++ G+N G LG +I P +Q V VSCG +H+ AI + G+I
Sbjct: 52 LLADGTVWSCGNNSYGQLGRKNIKKSKRPAPIQA-LETQVVVSVSCGKEHSLAICKTGRI 110
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNHTGALL 400
+WG G S GQLG D P + K +QVSCG H+ AL
Sbjct: 111 YSWGSG------------SRGQLGIKEVKDQCSIPKNIAALSRDKIIQVSCGHYHSIALT 158
Query: 401 E 401
+
Sbjct: 159 Q 159
>gi|145597074|ref|YP_001161371.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
gi|145306411|gb|ABP56993.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
Length = 477
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 147/381 (38%), Gaps = 47/381 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G LG G+ P+ ++ A+A G H+L +T G A G N FGQ
Sbjct: 77 WGDNKDGELGDGTTTDSSTPIAVDLPAGTTITAIAAGHDHSLAVTSAGTALAWGNNLFGQ 136
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG S P+ + V I+ G HS A+T G WG N G+LG G
Sbjct: 137 LGDGSTTDSS-TPIAVDLPAGTTVTAIAAGDDHSLAVTSAGTALAWGDNDRGELGDGTTT 195
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ V+ +G A G S+A+T G VL+WG G+LG G
Sbjct: 196 RRDTPV--DVDLPAGTTVTAIAAGIGHSLALTSAGTVLTWGLNSDGQLGDGT-------- 245
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR---------------- 265
+T TP + G V AAG LHS + G + +G+
Sbjct: 246 -TTDSSTPIAVDLPAGTTVTAIAAGSLHSLAVTTAGTILAWGNNSDGQLGDGTTTNSSTP 304
Query: 266 ------AVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
A + +G ++ S G WG N++G LG G+ +P V P
Sbjct: 305 IAVNLPASTTITAIDGGRDHSLAVTSAGSALAWGDNDDGQLGDGTTTNSSTPIAVNLPAD 364
Query: 320 ESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
+ + A + G IL W G++S G+LG G + P VN
Sbjct: 365 TTVTATTAGSLHSLAVTTAGTILAW------------GNNSDGRLGDGTTTNSSTPIAVN 412
Query: 380 FGENVKALQVSCGFNHTGALL 400
+ + G H+ AL+
Sbjct: 413 LPADTTVTATTAGSAHSMALV 433
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 100/270 (37%), Gaps = 57/270 (21%)
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-----VLSWGAGGSGRLGHGQE 214
+A +V+ T CL+ T L +VA G + VL+WG G LG G
Sbjct: 34 RAGRVV---TGAFCLALAVTLAQTLSVSPTVAQNGPSRDASDTVLAWGDNKDGELGDGT- 89
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR--------- 265
+T TP + G + AAG HS + G +G+
Sbjct: 90 --------TTDSSTPIAVDLPAGTTITAIAAGHDHSLAVTSAGTALAWGNNLFGQLGDGS 141
Query: 266 --------AVD-------KMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHS 310
AVD + +H+ ++ S G WG N+ G LG G+ +
Sbjct: 142 TTDSSTPIAVDLPAGTTVTAIAAGDDHSL--AVTSAGTALAWGDNDRGELGDGTTTRRDT 199
Query: 311 PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 369
P V P + V ++ G H+ A+ S G +LTWG +S GQLG G
Sbjct: 200 PVDVDLPAGTT-VTAIAAGIGHSLALTSAGTVLTWGL------------NSDGQLGDGTT 246
Query: 370 VDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
D P V+ ++ G H+ A+
Sbjct: 247 TDSSTPIAVDLPAGTTVTAIAAGSLHSLAV 276
>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
[Sarcophilus harrisii]
Length = 638
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 151/331 (45%), Gaps = 57/331 (17%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQIST 130
S+K +ACGG H++FL E G VY G N GQLG E G +P +I L + +V ++
Sbjct: 36 SIKEVACGGNHSIFLLEDGEVYTCGSNTKGQLG-HEREGN--KPEQIGALADQHIVHVAC 92
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G HS A++ G+L+ WG S+GQLG + IP ++ L+ Q + G +
Sbjct: 93 GESHSLALSDQGQLFSWGAGSDGQLG-HTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCM 151
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+ G+ +WG G+LG G+E S+ +P+ +K LEG+ + AAG HS
Sbjct: 152 ALAADGQFFTWGQNRHGQLGLGKE--------FPSQASPQRVKSLEGIPLAQVAAGGAHS 203
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHS 310
+ +G V + WG N G LG+ S
Sbjct: 204 FALSLSGAV------------------------------FGWGRNNAGQLGLSDETDRQS 233
Query: 311 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 369
P V+ V +SCG +HTA +++ G + T+G G S GQLGH +
Sbjct: 234 PCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAG------------SFGQLGHDSM 280
Query: 370 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
D ++P V + Q++CG HT A +
Sbjct: 281 NDEVNPRRVLELMGSEVTQIACGRQHTLAFV 311
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 140/321 (43%), Gaps = 56/321 (17%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG + P I
Sbjct: 75 KPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKK 134
Query: 121 LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++++ Q+S G H A+ DG+ + WG+N +GQLGLGK+ P +V+ L GI
Sbjct: 135 LNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQAS-PQRVKSLEGIPL 193
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V WG +G+LG E T +P +K L K
Sbjct: 194 AQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDE---------TDRQSPCHVKLLRTQK 244
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
V + G H+A + ++G V +T+G+ G
Sbjct: 245 VVYISCGEEHTAVLTKSGGV------------------------------FTFGAGSFGQ 274
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDG 357
LG S++ +P RV S V Q++CG +HT A S G I +G G
Sbjct: 275 LGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR-------- 325
Query: 358 HSSGGQLGHGNDVDYIHPTIV 378
GQLG G+ + P+ V
Sbjct: 326 ----GQLGTGHTCNVKCPSPV 342
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL R P + ++CG HT LT++G V+ G FGQ
Sbjct: 215 WGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQ 274
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 275 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 333
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 334 CNVKCPSPVK 343
>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 784
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 161/381 (42%), Gaps = 56/381 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS R PV S + A+A GGAHT LT +G V G N FGQ
Sbjct: 84 WGYNWSGQLGDGSYTDRSTPVAVSGLPS-GVTAIAAGGAHTCALTSSGGVMCWGGNYFGQ 142
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ +SGL V I+ G H+ A+ G ++ WG N +GQLG G
Sbjct: 143 LGDGSYTDRS-TPVAVSGLPSGVTAIAAGGAHTCALMSSGGVWCWGYNLSGQLGDGSTIY 201
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L T AA G+ + A+TG G V WG G G+LG G
Sbjct: 202 HITPV--AVSGLPSEVTAIAA-GYAHTCALTGSGGVWCWGDNGFGQLGDGSF-------- 250
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
T TP + L IAA G ++ + +G V+ +G D +G+ R
Sbjct: 251 -TDSSTPAAVGGLPSGVTAIAAGG-RYTCALTSSGGVWCWGRN--DSGQLGDGSFTNRST 306
Query: 281 -------PS--------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
PS L S G ++ WG N++G LG GS +P V G
Sbjct: 307 PGAVGGLPSGVTAIAAGGAHTCALTSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVSG--L 364
Query: 320 ESPVDQVSCGWKHTAA-ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
S V ++ G HT A S G + WG G F GQLG G D P V
Sbjct: 365 PSGVTAIAAGGAHTCARTSSGGVWCWG-----GNFY-------GQLGDGTTTDRSTPGAV 412
Query: 379 NFGENVKALQVSCGFNHTGAL 399
+ G ++ G HT AL
Sbjct: 413 S-GLPSGVTAIAAGNYHTCAL 432
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 162/387 (41%), Gaps = 64/387 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG GS R PV S + A+A GGAHT L +G V+ G N GQ
Sbjct: 135 WGGNYFGQLGDGSYTDRSTPVAVSGLPS-GVTAIAAGGAHTCALMSSGGVWCWGYNLSGQ 193
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I Y + P+ +SGL EV I+ GY H+ A+T G ++ WG N GQLG G
Sbjct: 194 LGDGSTI-YHITPVAVSGLPSEVTAIAAGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTD 252
Query: 163 KVIP-----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
P +P+ V + A G + A+T G V WG SG+LG G
Sbjct: 253 SSTPAAVGGLPSGVTAI--------AAGGRYTCALTSSGGVWCWGRNDSGQLGDGSF--- 301
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
T+ TP + L IAA G H+ + +G V+ +G D +G++
Sbjct: 302 ------TNRSTPGAVGGLPSGVTAIAAGG-AHTCALTSSGGVWCWGGN--DSGQLGDGSY 352
Query: 278 ARR--PSLISG---------------------GELYTWGSNENGCLGIGSIDVLHSPERV 314
R P +SG G ++ WG N G LG G+ +P V
Sbjct: 353 TDRSTPGAVSGLPSGVTAIAAGGAHTCARTSSGGVWCWGGNFYGQLGDGTTTDRSTPGAV 412
Query: 315 QGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G S V ++ G HT A++ G W W G + GQLG G +
Sbjct: 413 SG--LPSGVTAIAAGNYHTCALT-GSDGVWCW----------GDNFYGQLGDGTTTNRST 459
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V+ G ++ G HT AL
Sbjct: 460 PGAVS-GLPSGVTAIAAGNYHTCALTS 485
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 157/383 (40%), Gaps = 60/383 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G+ R P S + A+A G HT LT + V+ G N +GQ
Sbjct: 390 WGGNFYGQLGDGTTTDRSTPGAVSGLPS-GVTAIAAGNYHTCALTGSDGVWCWGDNFYGQ 448
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P +SGL V I+ G +H+ A+T G ++ WG+N +GQLG G
Sbjct: 449 LGDGTTTNRS-TPGAVSGLPSGVTAIAAGNYHTCALTSSGGVWCWGRNDSGQLGDGTTTN 507
Query: 163 KVIP-----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ P +P+ V + A G + A+ G V WG G+LG G
Sbjct: 508 RSTPGAVGGLPSGVTAI--------AAGDYHTCALMSSGGVWCWGLNNRGQLGDGSY--- 556
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
T TP + L + I AAG H+ + + V+ +G + ++ +
Sbjct: 557 ------TDSSTPVAVGGLPSGVMAI-AAGNYHTCALTGSDGVWCWGTNSDGQLGDGTTTN 609
Query: 278 ARRPSLISG---------------------GELYTWGSNENGCLGIGSIDVLHSPERVQG 316
P +SG G ++ WG N +G LG G+ +P V G
Sbjct: 610 RSTPVAVSGLPSGVTAIAAGNYHTCALTSSGGVWCWGYNLSGQLGDGTTTNRSTPGAVSG 669
Query: 317 PFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 376
S V ++ G +HT A++ G W WG ++ GQLG G + P
Sbjct: 670 --LPSGVTAIAAGDEHTCALT-GSGGVWCWGDNY----------YGQLGDGTTTNRSTPG 716
Query: 377 IVNFGENVKALQVSCGFNHTGAL 399
V+ G ++ G HT AL
Sbjct: 717 AVS-GLPSGVTAIAAGVYHTCAL 738
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 144/337 (42%), Gaps = 51/337 (15%)
Query: 66 SAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
S+F + A+A G HT LT +G V+ G N GQLG S P+ +SGL
Sbjct: 54 SSFSPLQGVTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRS-TPVAVSGLPSG 112
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V I+ G H+ A+T G + WG N GQLG G + P+ V L T AA
Sbjct: 113 VTAIAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPV--AVSGLPSGVTAIAA- 169
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G + A+ G V WG SG+LG G S+I TP + L +V A
Sbjct: 170 GGAHTCALMSSGGVWCWGYNLSGQLGDG--STIY-------HITPVAVSGLP-SEVTAIA 219
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP---------------------SL 283
AG+ H+ + +G V+ +GD ++ + P +L
Sbjct: 220 AGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAAVGGLPSGVTAIAAGGRYTCAL 279
Query: 284 ISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 342
S G ++ WG N++G LG GS +P V G S V ++ G HT A+ S G +
Sbjct: 280 TSSGGVWCWGRNDSGQLGDGSFTNRSTPGAVGG--LPSGVTAIAAGGAHTCALTSSGGV- 336
Query: 343 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
W WGG+ GQLG G+ D P V+
Sbjct: 337 -WCWGGND----------SGQLGDGSYTDRSTPGAVS 362
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 95/201 (47%), Gaps = 20/201 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R PV S + A+A G HT LT +G V+ G N GQ
Sbjct: 594 WGTNSDGQLGDGTTTNRSTPVAVSGLPS-GVTAIAAGNYHTCALTSSGGVWCWGYNLSGQ 652
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P +SGL V I+ G H+ A+T G ++ WG N GQLG G
Sbjct: 653 LGDGTTTNRS-TPGAVSGLPSGVTAIAAGDEHTCALTGSGGVWCWGDNYYGQLGDGTTTN 711
Query: 163 KVIP-----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ---E 214
+ P +P+ V + A G + A+TG G V+ WG G G+LG G+
Sbjct: 712 RSTPGAVSGLPSGVTAI--------AAGVYHTCALTGSGGVMCWGNNGDGQLGDGRPLYR 763
Query: 215 SSILGFLRSTS--EYTPRLIK 233
++ + + S S Y P +++
Sbjct: 764 TTPVDVVTSASWGVYLPMIVR 784
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 123/312 (39%), Gaps = 56/312 (17%)
Query: 112 SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
S PL + V I+ G H+ A+T GE++ WG N +GQLG G + P+ V
Sbjct: 55 SFSPL------QGVTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPV--AV 106
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L T AA G + A+T G V+ WG G+LG G T TP
Sbjct: 107 SGLPSGVTAIAA-GGAHTCALTSSGGVMCWGGNYFGQLGDGSY---------TDRSTPVA 156
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFG-----------------DRAVDKMLFQ- 273
+ L IAA G H+ + +G V+ +G AV + +
Sbjct: 157 VSGLPSGVTAIAAGG-AHTCALMSSGGVWCWGYNLSGQLGDGSTIYHITPVAVSGLPSEV 215
Query: 274 ---EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 330
+A +L G ++ WG N G LG GS +P V G S V ++ G
Sbjct: 216 TAIAAGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAAVGG--LPSGVTAIAAGG 273
Query: 331 KHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 389
++T A+ S G + W G + GQLG G+ + P V G +
Sbjct: 274 RYTCALTSSGGVWCW------------GRNDSGQLGDGSFTNRSTPGAVG-GLPSGVTAI 320
Query: 390 SCGFNHTGALLE 401
+ G HT AL
Sbjct: 321 AAGGAHTCALTS 332
>gi|12844231|dbj|BAB26286.1| unnamed protein product [Mus musculus]
gi|148700107|gb|EDL32054.1| hect domain and RLD 4, isoform CRA_d [Mus musculus]
Length = 233
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 122/237 (51%), Gaps = 15/237 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V ++ G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 109/271 (40%), Gaps = 57/271 (21%)
Query: 100 FGQLG---ISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
+GQLG I E I LEP R + K+V + G H+ + DG +Y G N GQL
Sbjct: 9 YGQLGLGGIDEEI--VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQL 66
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG-HGQE 214
G K K P +V L A G ++A+ G+V +WG G+LG G E
Sbjct: 67 GHEKSRKK----PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE 122
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
I PR IK L +++ A G+ HS
Sbjct: 123 ECI---------RVPRNIKSLSDIQIVQVACGYYHSL----------------------- 150
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH--SPERVQGPFSESPVDQVSCGWKH 332
+L E++ WG N+ G LG+G ID SP+ ++ P QV+ G H
Sbjct: 151 -------ALSKASEVFCWGQNKYGQLGLG-IDCQKQTSPQLIKSLLG-IPFMQVAAGGAH 201
Query: 333 TAAIS-EGKILTWGWG--GSHGTFSEDGHSS 360
+ ++ G I WG G G E+G +
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENGRCA 232
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIG 110
QLG+++ G
Sbjct: 221 QLGLNDENG 229
>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
Length = 1106
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 164/374 (43%), Gaps = 73/374 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + + +++ +ACG HT +T +G +Y G ++
Sbjct: 336 WGEESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNY 395
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G + G LG G
Sbjct: 396 GLLGHGNQVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHG 454
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ K + +P ++E L G+ T QAA G + AV GK+ +WG G
Sbjct: 455 DR--KSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 512
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + S L P + L ++A
Sbjct: 513 GRLGHGDKESKL---------VPTCVVTLVEPNCQVACG--------------------- 542
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
H+ +L G +YT GS G LG D P RV+G S+S V+++
Sbjct: 543 ----------HSMTVALSRSGHVYTMGSCVYGQLGNTQADG-KLPIRVEGKLSKSFVEEI 591
Query: 327 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 385
+CG H A + S ++ TWG G + G+LGHG+ D PT+V ++ +
Sbjct: 592 ACGAYHVAVLTSRTEVFTWGKGAN------------GRLGHGDTNDRNTPTLVEALKDKQ 639
Query: 386 ALQVSCGFNHTGAL 399
++CG N T A+
Sbjct: 640 VKSIACGTNFTAAI 653
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 103/238 (43%), Gaps = 50/238 (21%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G + + VT G+V SWG GRLGHG +S +
Sbjct: 302 LPKALESAVVLDVQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPH------- 354
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
P+LI+ L +++ A G H+ + +G +Y +GD
Sbjct: 355 --PKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGD---------------------- 390
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 345
G+ G LG G+ P+RV GP V +SCG HTA + S G++ T+G
Sbjct: 391 ------GTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFG 444
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
GTF G LGHG+ P + + ++ +Q +CG HT A++E +
Sbjct: 445 ----DGTF--------GALGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVM 490
>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
Length = 1016
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 156/334 (46%), Gaps = 57/334 (17%)
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIS 129
++L A G H+L L G V + G N GQLG + +P RI L+ V +S
Sbjct: 23 NTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG-RKGTPRGEQPERIPALETLNVALVS 81
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G HS A+ G ++ WG S GQLG+G+ IP K++ L+GI Q A G S
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTF-IPKKIKTLAGIKIIQVACGHYHS 140
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VA++ G+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG H
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGHH 192
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHA--RRPSLISGGELYTWGSNENGCLGIGSIDV 307
S + +G + +G + ++ GN+A +R +S G L T G
Sbjct: 193 SFALSLSGTSFGWGSNSAGQLALS-GNNAPVQRYKPVSIGALKTLG-------------- 237
Query: 308 LHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGH 366
V +SCG+KHTA ++ +GK+ T+ G +S GQLGH
Sbjct: 238 ---------------VVSISCGYKHTAVLTQDGKVFTF------------GDNSYGQLGH 270
Query: 367 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
+ P +V E + + Q+ CG +HT A +
Sbjct: 271 DPTAEKRGPQLVERIEGLVS-QIDCGSDHTLAYI 303
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 144/307 (46%), Gaps = 42/307 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG +P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E + P +I L +++Q++ G++HS A++ DG+++ WG NS+GQLGLGK+
Sbjct: 108 GIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQL------ALSGNNA 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + ++G+V+ FGD + ++ R P
Sbjct: 221 PVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQ 280
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGK 340
L+ ER++G V Q+ CG HT A + G+
Sbjct: 281 LV---------------------------ERIEG-----LVSQIDCGSDHTLAYIYTTGQ 308
Query: 341 ILTWGWG 347
++++G G
Sbjct: 309 VVSFGRG 315
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 126/281 (44%), Gaps = 56/281 (19%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
++Q ++G HHS + DG + G NS GQLG +K P ++ L + +
Sbjct: 25 LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG--RKGTPRGEQPERIPALETLNVALVSC 82
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E S+AV G+V +WGA G+LG G+ F +T + P+ IK L G+K+ A
Sbjct: 83 GKEHSLAVCHKGRVFAWGAASEGQLGIGE------FKETT--FIPKKIKTLAGIKIIQVA 134
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG- 303
G HS + E+G+V+ +WG+N +G LG+G
Sbjct: 135 CGHYHSVALSEDGQVF------------------------------SWGTNSHGQLGLGK 164
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
SP+RV+ P+ QV+ G H+ A+S ++GWG + S GQ
Sbjct: 165 EFPSQASPQRVRS-LEGIPLAQVAAGGHHSFALSLSGT-SFGWGSN----------SAGQ 212
Query: 364 L---GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
L G+ V P + + + + +SCG+ HT L +
Sbjct: 213 LALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQ 253
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 19/212 (8%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GG H+ L+ +G + G N G
Sbjct: 152 WGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAG 211
Query: 102 QLGISENIG--YSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N +P+ I LK VV IS GY H++ +T DG+++ +G NS GQLG
Sbjct: 212 QLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSW--GAGGSGRLGH-GQE 214
A K P VE + G+ + Q G + ++A + G+V+S+ G G + R H G E
Sbjct: 272 PTAEK--RGPQLVERIEGLVS-QIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGAE 328
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
SS + L S K+L V+VK AG
Sbjct: 329 SSDISCLVSA--------KDLADVQVKHIFAG 352
>gi|348676014|gb|EGZ15832.1| hypothetical protein PHYSODRAFT_315997 [Phytophthora sojae]
Length = 614
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 112/215 (52%), Gaps = 18/215 (8%)
Query: 44 GNGDYGRLGLGSL---ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
G DYG+LGLG E RPV F + + A+ACG +T+ G V A G ND
Sbjct: 198 GCNDYGQLGLGDHRNGELVPRPV--EYFFRRPVLAVACGQHYTIASLRDGGVVAFGKNDH 255
Query: 101 GQLGISENIGYSLEPLRISG-LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLG+ +P R++ L + VV Q+S GYHH++ +T DG +Y +G+N GQLGLG
Sbjct: 256 GQLGLDSTSEPVSQPTRLAAPLDRLVVPQLSCGYHHTAVVTEDGAVYTFGRNDYGQLGLG 315
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
K + P +VE L+ + Q A G ++ ++ GKV +G R HGQ L
Sbjct: 316 HKMH--MARPARVESLARMRITQVACGCYHTLVLSDDGKVFPFG-----RNNHGQ----L 364
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G S +P+LI L V AAGF HS C+
Sbjct: 365 GLETSVDCLSPQLISTLRNKTVTKVAAGFYHSVCL 399
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 151/368 (41%), Gaps = 67/368 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKAL--ACGGAHTLFLTETGCVYATGLND 99
+G YG L LG R P+ V H + + ACG T L E G VY G ND
Sbjct: 36 FGQNTYGELALGDTTDRSAPIRVDLGNSNHGRRVVDVACGNEQTAILFEDGDVYTCGYND 95
Query: 100 FGQ--LGISENIGYSLEPLRIS-GL-KKEVVQIST--GYHHSSAITVDGELYMWGKNSNG 153
GQ +G +E + LR S GL V+I + G H +A+ +G LY G N G
Sbjct: 96 SGQCAIGTTERV----PTLRFSPGLSSNRTVRIFSGNGSEHLAALHANGNLYTVGFNMRG 151
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLGLG ++ + T VE L+G + + V G + + G G+LG G
Sbjct: 152 QLGLG--SSTTVMEATLVEELAGKRVADVGCSYFHTAIVMDNGDLYACGCNDYGQLGLGD 209
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
+ E PR ++ V L AC
Sbjct: 210 HRN--------GELVPRPVEYFFRRPV-------LAVAC--------------------- 233
Query: 274 EGNHARRPSLISGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKH 332
G H SL GG + +G N++G LG+ S + + P R+ P V Q+SCG+ H
Sbjct: 234 -GQHYTIASLRDGG-VVAFGKNDHGQLGLDSTSEPVSQPTRLAAPLDRLVVPQLSCGYHH 291
Query: 333 TAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 391
TA ++E G + T+ G + GQLG G+ + P V ++ QV+C
Sbjct: 292 TAVVTEDGAVYTF------------GRNDYGQLGLGHKMHMARPARVESLARMRITQVAC 339
Query: 392 GFNHTGAL 399
G HT L
Sbjct: 340 GCYHTLVL 347
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 121/267 (45%), Gaps = 20/267 (7%)
Query: 29 RWISSTLQRRFAALWGNGDY--------GRLGLGSLESRWRPVVCSAFEKHSLKALACGG 80
R S AAL NG+ G+LGLGS + + + + C
Sbjct: 123 RIFSGNGSEHLAALHANGNLYTVGFNMRGQLGLGSSTTVMEATLVEELAGKRVADVGCSY 182
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAIT 139
HT + + G +YA G ND+GQLG+ ++ L P + ++ V+ ++ G H++ A
Sbjct: 183 FHTAIVMDNGDLYACGCNDYGQLGLGDHRNGELVPRPVEYFFRRPVLAVACGQHYTIASL 242
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-LSGIFTKQAALGFEQSVAVTGGGKV 198
DG + +GKN +GQLGL ++ + PT++ L + Q + G+ + VT G V
Sbjct: 243 RDGGVVAFGKNDHGQLGL-DSTSEPVSQPTRLAAPLDRLVVPQLSCGYHHTAVVTEDGAV 301
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
++G G+LG G + + P ++ L +++ A G H+ + ++G+
Sbjct: 302 YTFGRNDYGQLGLGHKMHMA---------RPARVESLARMRITQVACGCYHTLVLSDDGK 352
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLIS 285
V+ FG ++ + P LIS
Sbjct: 353 VFPFGRNNHGQLGLETSVDCLSPQLIS 379
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 24/179 (13%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSA-FEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G D+G+LGL S E +P +A ++ + L+CG HT +TE G VY G ND+
Sbjct: 250 FGKNDHGQLGLDSTSEPVSQPTRLAAPLDRLVVPQLSCGYHHTAVVTEDGAVYTFGRNDY 309
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+ + + P R+ L + + Q++ G +H+ ++ DG+++ +G+N++GQLGL
Sbjct: 310 GQLGLGHKM-HMARPARVESLARMRITQVACGCYHTLVLSDDGKVFPFGRNNHGQLGL-- 366
Query: 160 KAAKVIPIPTKVECLSG---------IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
T V+CLS TK AA GF SV + G + + A GSG L
Sbjct: 367 --------ETSVDCLSPQLISTLRNKTVTKVAA-GFYHSVCLVGPTEGETPPAQGSGTL 416
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 102/269 (37%), Gaps = 52/269 (19%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVT 193
S + V+G +Y +G+N+ G+L LG + PI + G A G EQ+ +
Sbjct: 25 SDVLEVEG-VYSFGQNTYGELALGDTTDRSAPIRVDLGNSNHGRRVVDVACGNEQTAILF 83
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G V + G SG+ G T+E P L S +
Sbjct: 84 EDGDVYTCGYNDSGQCAIG-----------TTERVPTL----------------RFSPGL 116
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
N V IF + + +L + G LYT G N G LG+GS +
Sbjct: 117 SSNRTVRIFSGNGSEHL----------AALHANGNLYTVGFNMRGQLGLGSSTTVMEATL 166
Query: 314 VQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD-Y 372
V+ + V V C + HTA + + +G G + GQLG G+ +
Sbjct: 167 VE-ELAGKRVADVGCSYFHTAIVMD-----------NGDLYACGCNDYGQLGLGDHRNGE 214
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ P V + L V+CG ++T A L
Sbjct: 215 LVPRPVEYFFRRPVLAVACGQHYTIASLR 243
>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Apis florea]
Length = 4812
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 147/319 (46%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K ++ GG H L LT+ G V++ G + G
Sbjct: 2992 GEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEGEDG 3051
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG +I +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3052 KLGHGNSISLD-KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDT 3110
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A + P V+ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3111 ATQ--SKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGG----- 3163
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S YTP LI L G+ V G S + + G V+ +G ++ +H
Sbjct: 3164 ----SDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3219
Query: 279 RRPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R+P+L+ G G++Y WG N++G G G+ V P V
Sbjct: 3220 RKPTLVEGLRGKKVIHVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTIVNKKPSLVHE 3279
Query: 317 PFSESPVDQVSCGWKHTAA 335
++ V++VSCG H+ A
Sbjct: 3280 -LDDARVNRVSCGSSHSIA 3297
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 139/323 (43%), Gaps = 38/323 (11%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G +S P + + + +K +A GG H L L+ G VY+ G D G
Sbjct: 4011 GYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4070
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + Y L L E+V I+ G HHS+AIT G LY WGK G+LG G
Sbjct: 4071 KLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSE 4130
Query: 162 AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +E L A G Q++ VT V SWG G G+LG G
Sbjct: 4131 DQL--TPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4182
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P I+ L G+ V G S + +G +Y +G ++ +H R
Sbjct: 4183 ---SDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVR 4239
Query: 280 RPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
RP ++ GE++TWG N+ G LG G+ L P V
Sbjct: 4240 RPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHA- 4298
Query: 318 FSESPVDQVSCGWKHTAAISEGK 340
+ +V+CG HT A S K
Sbjct: 4299 LQGKKITRVACGSAHTLAWSTMK 4321
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 169/386 (43%), Gaps = 57/386 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG PV+C + L GG TLF +T G VYATG G
Sbjct: 3958 WGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLT-GGEQTLFAVTADGKVYATGYGAVG 4016
Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S + LE ++ +KK V +++G H A++ +G +Y WG+ +G+LG
Sbjct: 4017 RLGIGGTDSVMVPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4074
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P +E L G A G S A+T G + +WG G GRLGHG
Sbjct: 4075 GNRLS--YDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 4128
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + TP+LI+ L+ KV A +G + C+ ++ V+ +GD K+
Sbjct: 4129 -----SEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4183
Query: 276 NHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + P +L G +YTWG + LG G+ D + P +
Sbjct: 4184 DGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRK 4243
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V + ++ G H A ++ G++ TW G + GQLG G
Sbjct: 4244 VAA-LQGKKIISIATGSLHCVACTDKGEVFTW------------GDNDEGQLGDGTTSAL 4290
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGA 398
P +V+ + K +V+CG HT A
Sbjct: 4291 QRPRLVHALQGKKITRVACGSAHTLA 4316
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 158/350 (45%), Gaps = 77/350 (22%)
Query: 92 VYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
VY GLND QLG + + L+P+ I+G K + +S +
Sbjct: 2936 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQ----------E 2985
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G+ +NG+LGLG + P P + LS K+ ++ G + ++A+T GKV
Sbjct: 2986 GKLYACGEGTNGRLGLGDDSNVCEPKP--IPFLSQYVIKKVSVHSGGKHALALTQDGKVF 3043
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G G+LGHG S S PRLI+ L+ +++ A G HSA I +G +
Sbjct: 3044 SWGEGEDGKLGHGN---------SISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGEL 3094
Query: 260 YIFG-----------------DRAVDKMLFQE-------GNHARRPSLISGGELYTWGSN 295
Y +G + V ++ Q A+ +L + G +Y+WG
Sbjct: 3095 YTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDG 3154
Query: 296 ENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 351
+ G LG G D ++P +R+ G V Q+ CG + + A+++ G++ TWG G
Sbjct: 3155 DFGKLGRGGSDGCYTPLLIDRLNG----LGVVQIECGAQFSLALTKYGEVWTWGKGDYF- 3209
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHGND PT+V K + V+ G H A+ +
Sbjct: 3210 -----------RLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTD 3248
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 145/337 (43%), Gaps = 51/337 (15%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
+G +Y G N GQLG E L L S VQ++ G A+T DG++Y G
Sbjct: 3952 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATG 4011
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGS 206
+ G+LG+G + +PT +E + +F K+ A+ G + +A++ G V SWG G
Sbjct: 4012 YGAVGRLGIG--GTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDD 4069
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGHG L + R P+LI+EL G ++ A G HSA I G +Y +G
Sbjct: 4070 GKLGHGNR---LSYDR------PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 4120
Query: 267 VDKMLFQEGNHARRPSLISGGELY------------------------TWGSNENGCLGI 302
++ + P LI + Y +WG + G LG
Sbjct: 4121 YGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4180
Query: 303 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 361
G D P +++ + V +V CG + + A++ G I TWG G H
Sbjct: 4181 GGSDGCKIPMKIES-LAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYH----------- 4228
Query: 362 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+LGHG D P V + K + ++ G H A
Sbjct: 4229 -RLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA 4264
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 127/281 (45%), Gaps = 26/281 (9%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+ +Y +LG K C +R L NG+ + GS E+++ P F
Sbjct: 451 SPFYYDTIAELGIKQLCCT-------ERALMILSVNGNVYMMYYGS-ETQY-PQRVYGFS 501
Query: 70 KHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVV 126
+ + +A G H L LT+ VY+ G D G+LG + Y EP I L +K +
Sbjct: 502 EKPIIMIASHSDGTHYLALTQDNSVYSWGNGDGGRLGHGDRAWYD-EPKLIEALVEKNIT 560
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
I+ G +S+A++ +GELY WG+ + G+LG G + + IPT V L+G A G
Sbjct: 561 FIACGSTYSAALSSNGELYTWGRGNYGRLGHGN--SDNVMIPTLVTALNGHMVVYVACGS 618
Query: 187 --EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
Q++ VT G V SWG G G+LG G TP+++ +L + V
Sbjct: 619 GDSQTLCVTASGIVFSWGDGNYGKLGRGG---------CDGSKTPKIVDKLLDINVAKVY 669
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
G SA + G VY +G ++ +H R P +I
Sbjct: 670 CGGQFSAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPKIID 710
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 21/227 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNGD GRLG G P + A + ++ +ACG ++ L+ G +Y G ++G+
Sbjct: 529 WGNGDGGRLGHGDRAWYDEPKLIEALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGR 588
Query: 103 L--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL--- 157
L G S+N+ ++G V +G + +T G ++ WG + G+LG
Sbjct: 589 LGHGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGC 648
Query: 158 -GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G K K+ V+ L I + G + S A+T G+V +WG G + RLGHG E
Sbjct: 649 DGSKTPKI------VDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEDH 702
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P++I L+ KVK G LH + E+ +Y +G
Sbjct: 703 V---------RYPKIIDILKTKKVKELCVGNLHVLALTEDQLIYGWG 740
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 51/286 (17%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y+WG N QLG G K +K I +P E LS + A G + V+ GK+ + G
Sbjct: 2936 VYVWGLNDKDQLG-GLKGSK-IKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGE 2993
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
G +GRLG G +S++ P+ I L +K + +G H+ + ++G+V+
Sbjct: 2994 GTNGRLGLGDDSNVC---------EPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFS 3044
Query: 262 FGD-----------RAVDKMLFQEGNHARR-----------PSLISGGELYTWGSNENGC 299
+G+ ++DK E ++R ++ S GELYTWG E G
Sbjct: 3045 WGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGR 3104
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGGSHGTFSED 356
LG G P+ VQ + + Q++CG + A ++G + +WG G F
Sbjct: 3105 LGHGDTATQSKPKLVQSLVGQRII-QIACGSRDAQTMALTADGLVYSWG----DGDF--- 3156
Query: 357 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 402
G+LG G P +++ + +Q+ CG + AL +Y
Sbjct: 3157 -----GKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKY 3197
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 47/237 (19%)
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A+T V SWG G GRLGHG + P+LI+ L + A G +
Sbjct: 518 LALTQDNSVYSWGNGDGGRLGHGDRAWY---------DEPKLIEALVEKNITFIACGSTY 568
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------- 286
SA + NG +Y +G ++ ++ P+L++
Sbjct: 569 SAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTA 628
Query: 287 -GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 344
G +++WG G LG G D +P ++ + V +V CG + +AA++ G++ TW
Sbjct: 629 SGIVFSWGDGNYGKLGRGGCDGSKTP-KIVDKLLDINVAKVYCGGQFSAALTAYGEVYTW 687
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G G ++ +LGHGN+ +P I++ + K ++ G H AL E
Sbjct: 688 GKGEAY------------RLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHVLALTE 732
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+YG+LG G + P + ++ + CGG + LT G VY G + +
Sbjct: 635 WGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYR 694
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG N + P I LK K+V ++ G H A+T D +Y WG+N GQ +
Sbjct: 695 LG-HGNEDHVRYPKIIDILKTKKVKELCVGNLHVLALTEDQLIYGWGRNDYGQ--IDPAL 751
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
V+P PT LSG A G QS A
Sbjct: 752 GTVVPEPTLCPTLSGKNVIGLACGPTQSFA 781
>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60467743|gb|EAL65761.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 2083
Score = 117 bits (292), Expect = 1e-23, Method: Composition-based stats.
Identities = 92/335 (27%), Positives = 151/335 (45%), Gaps = 53/335 (15%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG-YSLEPLRISGL--KKEV 125
EK ++K ++CG H ++E+G ++ G N GQLG +IG P R+ K +
Sbjct: 1217 EKRAIK-VSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPI 1275
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
+ + G HS + D +Y WG++ GQLG G K+ P +E +SG + A G
Sbjct: 1276 IMVECGGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQ-NRPKIIEDISGQKIQAIAAG 1334
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
F ++ + G++ S+G G G+LGHG S + + + E + + G K+ A
Sbjct: 1335 FAHTIVLKKSGELYSFGYGDQGQLGHG--SFVSKSIPTRIELNTIVGIQHGGGKITQIAC 1392
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSI 305
GF HS +N GE+Y+WG + G LG G+
Sbjct: 1393 GFGHSVICSDN------------------------------GEVYSWGLGKQGQLGHGNY 1422
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQL 364
+ + P ++ + V ++SCG +T A ++ K + +WG G +L
Sbjct: 1423 ESIARPRLIE---ALKGVTKISCGHFYTMATTDLKNVYSWGLGEHM------------KL 1467
Query: 365 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
GHG+D + P +V+F ++ CG NHT L
Sbjct: 1468 GHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTITL 1502
Score = 108 bits (269), Expect = 6e-21, Method: Composition-based stats.
Identities = 94/310 (30%), Positives = 134/310 (43%), Gaps = 63/310 (20%)
Query: 43 WGNGDYGRLG----LGSLESRWRPVVCSAFE-KHSLKALACGGAHTLFLTETGCVYATGL 97
WG G+LG +G +++ P F K + + CGG H++ + VY+ G
Sbjct: 1242 WGKNQSGQLGHGLDIGKIQTT--PKRLEFFRGKSPIIMVECGGEHSICVDSDYVVYSWGQ 1299
Query: 98 NDFGQLG-----ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
+ FGQLG +S+N +E ISG K + I+ G+ H+ + GELY +G
Sbjct: 1300 DKFGQLGHGTKSVSQNRPKIIED--ISGQK--IQAIAAGFAHTIVLKKSGELYSFGYGDQ 1355
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGI-----FTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
GQLG G +K IP ++ + GI Q A GF SV + G+V SWG G G
Sbjct: 1356 GQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGHSVICSDNGEVYSWGLGKQG 1415
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LGHG SI PRLI+ L+GV KI+ F A D
Sbjct: 1416 QLGHGNYESIA---------RPRLIEALKGV-TKISCGHFYTMATTDLK----------- 1454
Query: 268 DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
+Y+WG E+ LG GS D + RV F + V ++
Sbjct: 1455 --------------------NVYSWGLGEHMKLGHGS-DKNEATPRVVDFFIQKNVSKIV 1493
Query: 328 CGWKHTAAIS 337
CG HT ++
Sbjct: 1494 CGLNHTITLT 1503
Score = 107 bits (268), Expect = 7e-21, Method: Composition-based stats.
Identities = 101/375 (26%), Positives = 160/375 (42%), Gaps = 81/375 (21%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LG G+ S+ RP + ++A+A G AHT+ L ++G +Y+ G D G
Sbjct: 1297 WGQDKFGQLGHGTKSVSQNRPKIIEDISGQKIQAIAAGFAHTIVLKKSGELYSFGYGDQG 1356
Query: 102 QLG----ISENIGYSLEPLRISGLKK---EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
QLG +S++I +E I G++ ++ QI+ G+ HS + +GE+Y WG GQ
Sbjct: 1357 QLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGHSVICSDNGEVYSWGLGKQGQ 1416
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + I P +E L G+ + + G ++A T V SWG G +LGHG +
Sbjct: 1417 LGHGNYES--IARPRLIEALKGV--TKISCGHFYTMATTDLKNVYSWGLGEHMKLGHGSD 1472
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV---YIFGDRAVDKML 271
+ E TPR++ V G H+ + G + + D V+ +
Sbjct: 1473 KN---------EATPRVVDFFIQKNVSKIVCGLNHTITLTYPGDLNNNSLSNDDDVNDFI 1523
Query: 272 ------------------FQEGNHAR----RPSLISGGELYTWGSNENGCLGIGSIDVLH 309
G R S +S +Y G+ E+G LG+G
Sbjct: 1524 DLAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVS--PIYACGAGEHGKLGLGG----- 1576
Query: 310 SPERVQGPFSESPVD------------QVSCGWKHTAAI-SEGKILTWGWGGSHGTFSED 356
++ PF + P+ +SCG TA I S G + WG+G
Sbjct: 1577 ---DLKSPFFDKPIPTAIKGVNALNLIDISCGTDFTAMITSNGALYVWGYG--------- 1624
Query: 357 GHSSGGQLGHGNDVD 371
+ GQ+G+G D
Sbjct: 1625 ---NFGQIGNGKTDD 1636
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 74/183 (40%), Gaps = 58/183 (31%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL----- 97
WG G++ +LG GS ++ P V F + ++ + CG HT+ LT G + L
Sbjct: 1459 WGLGEHMKLGHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTITLTYPGDLNNNSLSNDDD 1518
Query: 98 -NDF-------------------------GQLGISEN------------------IGYSL 113
NDF G+LG++EN +G L
Sbjct: 1519 VNDFIDLAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVSPIYACGAGEHGKLGLGGDL 1578
Query: 114 E--------PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV 164
+ P I G+ ++ IS G ++ IT +G LY+WG + GQ+G GK
Sbjct: 1579 KSPFFDKPIPTAIKGVNALNLIDISCGTDFTAMITSNGALYVWGYGNFGQIGNGKTDDAW 1638
Query: 165 IPI 167
+PI
Sbjct: 1639 VPI 1641
Score = 47.8 bits (112), Expect = 0.011, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 20/101 (19%)
Query: 304 SIDVLHSPERVQGPF----SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
SI + PE + P +E +VSCGW H A ISE G++ TW G
Sbjct: 1197 SIKLKPDPELMICPMPPLKNEKRAIKVSCGWDHVALISESGELFTW------------GK 1244
Query: 359 SSGGQLGHGNDVDYIHPT---IVNFGENVKALQVSCGFNHT 396
+ GQLGHG D+ I T + F + V CG H+
Sbjct: 1245 NQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMVECGGEHS 1285
>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
Length = 1935
Score = 117 bits (292), Expect = 1e-23, Method: Composition-based stats.
Identities = 103/370 (27%), Positives = 160/370 (43%), Gaps = 65/370 (17%)
Query: 39 FAALWGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
F WG+ +G+LG G+ ++ RP V ++A+A G AH + L ++G +++ G
Sbjct: 1197 FVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIVLKKSGELFSFGY 1256
Query: 98 NDFGQLGI----SENIGYSLEPLRI-SGLKK----EVVQISTGYHHSSAITVDGELYMWG 148
DFGQLG S+NI +E I GL+ ++ QI+ G+ HS + +GE+Y WG
Sbjct: 1257 GDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSVICSENGEVYSWG 1316
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
GQ LG K + I P +E L G+ + + G +VA T V SWG+G +
Sbjct: 1317 LGKQGQ--LGHKVFENISKPRLIETLRGV--TKISCGHFHTVATTDLKNVYSWGSGEHMK 1372
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGH + E P+++ V G H+ I F D +
Sbjct: 1373 LGHSSDK---------DESVPKVVDFFIQKNVSKVVCGQNHTMTI-------TFPDDLNN 1416
Query: 269 KMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD---- 324
Q+ + S +Y WGS E+G LG+G ++ PF + P+
Sbjct: 1417 SN--QDDEDEENMNGKSSSPIYAWGSAEHGKLGLGG--------DLKSPFFDKPIPTAIK 1466
Query: 325 --------QVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
+SCG +A I S I WG G GQ+G+G + D P
Sbjct: 1467 GVNSLNLIDISCGSDFSAMITSNNAIYVWGCG------------RFGQIGNGKNDDVWVP 1514
Query: 376 TIVNFGENVK 385
T ++ ++ K
Sbjct: 1515 TRISLNDSTK 1524
Score = 108 bits (269), Expect = 5e-21, Method: Composition-based stats.
Identities = 93/332 (28%), Positives = 143/332 (43%), Gaps = 51/332 (15%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGL--KKEV 125
EK ++K ++CG H +T+ G +Y G N GQLG + +L P R+ K +
Sbjct: 1121 EKKAIK-VSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPI 1179
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
+ G H+ A+ + +Y WG + GQLG G KA P +E L+G + A G
Sbjct: 1180 FMVECGGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQ-SRPKVIEELTGQKIQAIAAG 1238
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
F ++ + G++ S+G G G+LG G S R ++ +G K+ A
Sbjct: 1239 FAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIAC 1298
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSI 305
GF HS EN GE+Y+WG + G LG
Sbjct: 1299 GFGHSVICSEN------------------------------GEVYSWGLGKQGQLGHKVF 1328
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQL 364
+ + P ++ + V ++SCG HT A ++ K + +WG G H +L
Sbjct: 1329 ENISKPRLIE---TLRGVTKISCGHFHTVATTDLKNVYSWG-SGEH-----------MKL 1373
Query: 365 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
GH +D D P +V+F +V CG NHT
Sbjct: 1374 GHSSDKDESVPKVVDFFIQKNVSKVVCGQNHT 1405
Score = 42.7 bits (99), Expect = 0.33, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 16/85 (18%)
Query: 319 SESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI--HP 375
+E +VSCGW H A I+ +G++ TW G + GQLGHG +V+ P
Sbjct: 1120 NEKKAIKVSCGWDHIAVITDDGELYTW------------GSNQSGQLGHGLEVNKTLSLP 1167
Query: 376 TIVNFGENVKAL-QVSCGFNHTGAL 399
V+F + V CG HT A+
Sbjct: 1168 KRVDFFRGKSPIFMVECGGEHTIAV 1192
>gi|449680679|ref|XP_002161042.2| PREDICTED: uncharacterized protein LOC100209924 [Hydra
magnipapillata]
Length = 809
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 185/416 (44%), Gaps = 57/416 (13%)
Query: 15 KQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK 74
K D KL +LG+ +S WG G LG G P V A ++
Sbjct: 350 KADGKLMLELGLFGDRVSVKEDACDIYTWGASPKGVLGHGEETEELFPRVVEALLGRDIR 409
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYH 133
+ACG HTL ++ G +++ G G+LG+ +NI PL+I + + +S
Sbjct: 410 TVACGTEHTLAVSVNGEMFSWGCGRGGKLGL-KNILDRYMPLKIGAFENVNITFVSCNEL 468
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
HS+++T GELY +G+ S LG + K +P KV+ + K + G E ++A+
Sbjct: 469 HSASVTESGELYTFGR-SGPHLGYTTEDRKQ-AVPRKVDFSTANKIKAVSCGLEFTIALN 526
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G++ S+G G+LG G + I P LIK L GV++ + G H +
Sbjct: 527 SEGELYSFGKNDCGQLGAGHFNDI---------EEPYLIKHLNGVRISKVSCGSKHVGAV 577
Query: 254 DENGRVYI-----FGDRAVDKMLFQE--------------------GNHARRPSLISGGE 288
NG V++ FG DK+ + G+H L G
Sbjct: 578 TVNGDVWLWGSNEFGQLGTDKLEAHDIPFEAPSTFWNEEIQDIKCGGSHT--VVLSCTGV 635
Query: 289 LYTWGSNENGCLGIG---SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 344
+Y +G+ ++G LG+ + + +P + P + + + +V CG +HTAA++E G + TW
Sbjct: 636 VYVFGNGQSGQLGVAVNQTSPYITNPCILSMP-NNTKIAKVDCGIEHTAAVTESGCLYTW 694
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
G G S G+LGHG+ D PT+V + ++CG HT A +
Sbjct: 695 GNG------------SRGRLGHGDHQDRYVPTLVESLAYKQVQSIACGAYHTAACV 738
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 42 LWGNGDYGRLGLGSLESR---WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
++GNG G+LG+ ++ P + S + + CG HT +TE+GC+Y G
Sbjct: 638 VFGNGQSGQLGVAVNQTSPYITNPCILSMPNNTKIAKVDCGIEHTAAVTESGCLYTWGNG 697
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
G+LG ++ + L S K+V I+ G +H++A +
Sbjct: 698 SRGRLGHGDHQDRYVPTLVESLAYKQVQSIACGAYHTAACVI 739
>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 743
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 162/361 (44%), Gaps = 65/361 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G G G+ +R PV A+A G H+L G V+A G ND GQ
Sbjct: 370 WGSNFSGERGEGTTNNRASPVQVQGLGGG--VAVAAGFNHSLAARSDGSVWAWGSNDSGQ 427
Query: 103 LG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N S P+++ GL VV ++ G+ HS A+ DG ++ WG N+ GQLG G
Sbjct: 428 LGDGTTRN---STSPVQVQGLSG-VVAVAAGFDHSLALRSDGSVWAWGSNAYGQLGEGTT 483
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+++P V+ LSG+ A G S+AV G V +WG+ G+LG G S+ L
Sbjct: 484 TNRLVP----VQVLSGVVA--VAAGSNHSLAVRSDGTVWTWGSNLYGQLGDGTTSNRL-- 535
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P ++ L GV AAG HS + +G V+ +G + ++ +G + R
Sbjct: 536 -------VPVQVQGLSGVAA--VAAGSFHSLAVHSDGSVWAWGSNSSGEL--GDGTTSNR 584
Query: 281 ------PSLISG----------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
P L G G ++TWGSN G LG G+ P +VQG
Sbjct: 585 LVPGRVPGLSGGVAVAAGGFHSLVVRSDGTVWTWGSNSFGELGDGTTTSRSVPVQVQG-- 642
Query: 319 SESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 377
S V V G H+ A+ S+G + TW G++S GQLG G P
Sbjct: 643 -LSGVVAVDAGNSHSLAVRSDGTVWTW------------GYNSYGQLGDGTTTRRSVPVQ 689
Query: 378 V 378
V
Sbjct: 690 V 690
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 107/333 (32%), Positives = 155/333 (46%), Gaps = 57/333 (17%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI 128
+ S LA G +++L L G V+ATG ND GQLG +S P+++ GL VV +
Sbjct: 44 DAPSRARLAAGSSYSLALRPDGTVWATGSNDLGQLGDGTTTNHS-APVQVPGLSG-VVAV 101
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
+ G HS A+ DG ++ WG NS+GQLG G ++ P+ +V+ LSG+ + A G
Sbjct: 102 AAGSSHSLAVRHDGTVWAWGSNSDGQLGDGTTTMRLTPV--RVQGLSGVVS--VAAGSSY 157
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S+AV G V +WG+ SG+LG G S+ L P + L GV V + AAG
Sbjct: 158 SLAVRSDGTVWAWGSNFSGQLGDGTTSNRL---------VPVQVPGLSGV-VSV-AAGSS 206
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISG-------------------- 286
HS + +G V+ +G + ++ +G R P + G
Sbjct: 207 HSLAVLSDGSVWAWGANSSGQL--GDGTKINRLVPVQVPGLSGVVAVAAGAAHSLAVRSD 264
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 345
G ++TWG+N G LG G+ P RVQG S V G H+ A+ S+G + W
Sbjct: 265 GTVWTWGANSFGQLGDGTKSDRLVPVRVQG---LSGVVASDVGSYHSLALRSDGSVWAW- 320
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
GH+S GQLG + P V
Sbjct: 321 -----------GHNSSGQLGDDSSTSRSVPVQV 342
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 170/378 (44%), Gaps = 57/378 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV + ++A G +++L + G V+A G N GQ
Sbjct: 120 WGSNSDGQLGDGTTTMRLTPVRVQGLSG--VVSVAAGSSYSLAVRSDGTVWAWGSNFSGQ 177
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+++ GL VV ++ G HS A+ DG ++ WG NS+GQLG G K
Sbjct: 178 LG-DGTTSNRLVPVQVPGLSG-VVSVAAGSSHSLAVLSDGSVWAWGANSSGQLGDGTKIN 235
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+++P+ +V LSG+ A S+AV G V +WGA G+LG G +S L
Sbjct: 236 RLVPV--QVPGLSGVVAVAAG--AAHSLAVRSDGTVWTWGANSFGQLGDGTKSDRL---- 287
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P ++ L GV + G HS + +G V+ +G + ++ P
Sbjct: 288 -----VPVRVQGLSGVVA--SDVGSYHSLALRSDGSVWAWGHNSSGQLGDDSSTSRSVPV 340
Query: 283 LISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
+ G G ++ WGSN +G G G+ + SP +VQG
Sbjct: 341 QVRGLSGGMAVTAGSSHSLAVGSDGTVWAWGSNFSGERGEGTTNNRASPVQVQGLGGGV- 399
Query: 323 VDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
V+ G+ H+ AA S+G + WG S D GQLG G + P V
Sbjct: 400 --AVAAGFNHSLAARSDGSVWAWG--------SND----SGQLGDGTTRNSTSPVQVQGL 445
Query: 382 ENVKALQVSCGFNHTGAL 399
V A V+ GF+H+ AL
Sbjct: 446 SGVVA--VAAGFDHSLAL 461
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 161/347 (46%), Gaps = 57/347 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ D G+LG G+ + PV + A+A G H+L L G V+A G N +GQ
Sbjct: 420 WGSNDSGQLGDGTTRNSTSPVQVQGLSG--VVAVAAGFDHSLALRSDGSVWAWGSNAYGQ 477
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+++ VV ++ G +HS A+ DG ++ WG N GQLG G +
Sbjct: 478 LGEGTTTNR-LVPVQV---LSGVVAVAAGSNHSLAVRSDGTVWTWGSNLYGQLGDGTTSN 533
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+++P+ +V+ LSG+ A G S+AV G V +WG+ SG LG G S+ L
Sbjct: 534 RLVPV--QVQGLSGV--AAVAAGSFHSLAVHSDGSVWAWGSNSSGELGDGTTSNRL---- 585
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM------------ 270
P + L G V +AA GF HS + +G V+ +G + ++
Sbjct: 586 -----VPGRVPGLSG-GVAVAAGGF-HSLVVRSDGTVWTWGSNSFGELGDGTTTSRSVPV 638
Query: 271 --------LFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
+ + ++ ++ S G ++TWG N G LG G+ P +V G S
Sbjct: 639 QVQGLSGVVAVDAGNSHSLAVRSDGTVWTWGYNSYGQLGDGTTTRRSVPVQVPG---LSG 695
Query: 323 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
V ++ G H + S+G + WG ++S GQLG+G+
Sbjct: 696 VVAMATGALHPLVVRSDGTVWAWG------------YNSFGQLGNGS 730
>gi|225424889|ref|XP_002269566.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
Length = 400
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 177/401 (44%), Gaps = 69/401 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHS---LKALACGGAHTLFLTETGCVYATGLND 99
WG G G+LG LE P + S + LACGGAH L LT G V G
Sbjct: 17 WGAGTDGQLGTTRLEDEHLPQLLDLPRFSSAGPISLLACGGAHVLALTTDGKVVTWGRGT 76
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLG + + SL+P + L+ V+ +S G+ HS ++ G L+ G S GQLG G
Sbjct: 77 SGQLGHGDMVS-SLQPKHVKLLESFVMTHVSAGWSHSGFVSDTGCLFTCGDGSFGQLGHG 135
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P+ KV Q A G S+ + G +V +G+G G+LG +++
Sbjct: 136 DCKSHCSPV--KVSYFDSKHVDQIACGMRHSLVLLKGDQVYGFGSGKRGQLGVSMDNT-- 191
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-----------DRAV 267
RS S P+ LEGV++ A HSA + NG +Y +G R +
Sbjct: 192 ---RSIS--VPQATVGLEGVEIISIDANGDHSAALSANGHLYTWGRGFGSTSDVHCPRCL 246
Query: 268 DKML-FQEG----NHARRPSLISGGELYTWGSNENGCLG----------IGSIDV-LHSP 311
L F + NH L GGE++ G N +G LG + I+V LH P
Sbjct: 247 PSSLCFTQVALGWNHML--VLTGGGEVFMLGGNRHGVLGDPQKGSQVKHLSVIEVFLHGP 304
Query: 312 --------ERVQGPFSESPVDQVSCGWKHTAAISEGKIL-TWGWGGSHGTFSEDGHSSGG 362
E+VQG V Q++ G +H+A ++E +++ TWGWG G
Sbjct: 305 EESREENLEKVQG-LDGLNVVQIAAGAEHSALVTENRVIKTWGWG------------EHG 351
Query: 363 QLGHGNDVDYIHPTIVNFGENVKA----LQVSCGFNHTGAL 399
QLG GN D I P V G + ++V CG T A+
Sbjct: 352 QLGLGNTYDQISPQAVRLGHRLPGQHTMIKVYCGSGFTFAI 392
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 36/231 (15%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSW 201
E++ WG ++GQLG + + +P + S A G +A+T GKV++W
Sbjct: 13 EIWSWGAGTDGQLGTTRLEDEHLPQLLDLPRFSSAGPISLLACGGAHVLALTTDGKVVTW 72
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G SG+LGHG S L P+ +K LE + +AG+ HS + + G ++
Sbjct: 73 GRGTSGQLGHGDMVSSL---------QPKHVKLLESFVMTHVSAGWSHSGFVSDTGCLFT 123
Query: 262 FGDRAVD--------------KMLFQEGNHARRPS--------LISGGELYTWGSNENGC 299
GD + K+ + + H + + L+ G ++Y +GS + G
Sbjct: 124 CGDGSFGQLGHGDCKSHCSPVKVSYFDSKHVDQIACGMRHSLVLLKGDQVYGFGSGKRGQ 183
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVS--CGWKHTAAIS-EGKILTWGWG 347
LG+ S+D S Q V+ +S H+AA+S G + TWG G
Sbjct: 184 LGV-SMDNTRSISVPQATVGLEGVEIISIDANGDHSAALSANGHLYTWGRG 233
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 43/157 (27%)
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGP-FSES-PVDQVSCGWKHTAAIS-EGKILTW 344
E+++WG+ +G LG ++ H P+ + P FS + P+ ++CG H A++ +GK++TW
Sbjct: 13 EIWSWGAGTDGQLGTTRLEDEHLPQLLDLPRFSSAGPISLLACGGAHVLALTTDGKVVTW 72
Query: 345 GWGGS---------------------------------HGTFSED-------GHSSGGQL 364
G G S H F D G S GQL
Sbjct: 73 GRGTSGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHSGFVSDTGCLFTCGDGSFGQL 132
Query: 365 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GHG+ + P V++ ++ Q++CG H+ LL+
Sbjct: 133 GHGDCKSHCSPVKVSYFDSKHVDQIACGMRHSLVLLK 169
>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 1044
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 161/362 (44%), Gaps = 61/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G LGLG +E + P+ + ++ + G HT+ LT++G V++ G ND
Sbjct: 4 WGSTVHGELGLGGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSCGNNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + +P ++ GL + +IS G +H+ A G+L+ WG +S+GQLG
Sbjct: 64 DQLGHKKQ---RTKPEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGWGSDSHGQLGFNG 120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P+P ++ L+ Q + G S+A+T G++ SWG G+LG G
Sbjct: 121 TTQ---PLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLG------- 170
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+RS E P LIK L G+ + A G HS + ++G +
Sbjct: 171 -MRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAI-------------------- 209
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
Y WG N G LG+ + P +++ V ++CG +A +S +
Sbjct: 210 ----------YGWGKNTYGQLGLNDEENKLHPTQLKT-LRSIRVKYIACGEDFSAFLSAD 258
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T G G GQLGHG+ + I P + QVSCG HT A
Sbjct: 259 GGVFTCGAGMY------------GQLGHGSTSNEILPRKIMELMGSTVTQVSCGKRHTLA 306
Query: 399 LL 400
L+
Sbjct: 307 LV 308
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 113/222 (50%), Gaps = 14/222 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G+LG ++ P + + + ++CG H+L LT G +Y+ G N GQ
Sbjct: 108 WGSDSHGQLGFNG-TTQPLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQ 166
Query: 103 LGISENIGYSLEPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ Y +P I S L + I+ G +HS A++ G +Y WGKN+ GQLGL +
Sbjct: 167 LGLGMRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEE 226
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
K+ P T+++ L I K A G + S ++ G V + GAG G+LGHG S
Sbjct: 227 NKLHP--TQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTS------ 278
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIF 262
+E PR I EL G V + G H+ A + GRVY F
Sbjct: 279 ---NEILPRKIMELMGSTVTQVSCGKRHTLALVPSRGRVYSF 317
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 59/139 (42%), Gaps = 9/139 (6%)
Query: 9 MTKYYLKQDIKLGSKLGICKRWISSTLQRRFAAL-------WGNGDYGRLGLGSLESRWR 61
M Y KQ + S LGI +I+ FA WG YG+LGL E++
Sbjct: 171 MRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLH 230
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P +K +ACG + FL+ G V+ G +GQLG L P +I L
Sbjct: 231 PTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEIL-PRKIMEL 289
Query: 122 K-KEVVQISTGYHHSSAIT 139
V Q+S G H+ A+
Sbjct: 290 MGSTVTQVSCGKRHTLALV 308
>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
30864]
Length = 1230
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 165/396 (41%), Gaps = 98/396 (24%)
Query: 43 WGNGDYGRLGLGSLESRW----RPVVCSAFEKHSLK----ALACGGAHTLFLTETGCVYA 94
WGN G+LGL P AF S+ A+ACG AHTLFL + G VY+
Sbjct: 88 WGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIACGRAHTLFLVD-GQVYS 146
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G ND GQLG + + +P R+ L+ + QI+ G HS A+T +G+++ WG N
Sbjct: 147 CGSNDQGQLGHKK---HRSKPERVDALEPYTITQIACGETHSLALTSNGQVFAWGDNKAS 203
Query: 154 QLGL---------------GKKAAKVIPI-----------------PTKVECLSGIFTKQ 181
QLGL K AA I P V L+G Q
Sbjct: 204 QLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDFMTRPRLVRALTGHKIVQ 263
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
G S+ ++ G V +WG SG+L L L++ P L+KEL G+ ++
Sbjct: 264 IVCGANFSLVLSERGDVFAWGDNTSGQL-------CLRELKTVP--VPTLVKELYGIPIR 314
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLG 301
AAG H+ + NG+V Y+WG+N+ G LG
Sbjct: 315 QLAAGGRHTLALTFNGQV------------------------------YSWGNNQFGQLG 344
Query: 302 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSS 360
+G P R++ ++CG H+ ++E G + ++G GG
Sbjct: 345 VGDTAPHTIPSRLKT-LEHQFCAHIACGEDHSVVLTETGGVYSFGAGGQ----------- 392
Query: 361 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
GQLGHG + I+P ++ A QV CG HT
Sbjct: 393 -GQLGHGTLQNEINPRMIFELMGKSASQVLCGRRHT 427
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 107/217 (49%), Gaps = 22/217 (10%)
Query: 53 LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS 112
L ++ RP + A H + + CG +L L+E G V+A G N GQL + E
Sbjct: 241 LAYMDFMTRPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRE----- 295
Query: 113 LEPLRISGLKKE-----VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
L+ + + L KE + Q++ G H+ A+T +G++Y WG N GQLG+G A I
Sbjct: 296 LKTVPVPTLVKELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHT--I 353
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P++++ L F A G + SV +T G V S+GAGG G+LGHG +E
Sbjct: 354 PSRLKTLEHQFCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQ---------NEI 404
Query: 228 TPRLIKELEGVKVKIAAAGFLHSAC-IDENGRVYIFG 263
PR+I EL G G H+ + ++Y FG
Sbjct: 405 NPRMIFELMGKSASQVLCGRRHTIVFFPKTNKIYAFG 441
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 10/213 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+L L L++ P + ++ LA GG HTL LT G VY+ G N FGQ
Sbjct: 283 WGDNTSGQLCLRELKTVPVPTLVKELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQ 342
Query: 103 LGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + +++ P R+ L+ + I+ G HS +T G +Y +G GQLG G
Sbjct: 343 LGVGDTAPHTI-PSRLKTLEHQFCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQ 401
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ P + L G Q G ++ K+ ++G GG+G+LG G +G
Sbjct: 402 NEI--NPRMIFELMGKSASQVLCGRRHTIVFFPKTNKIYAFGLGGNGQLGTG-----VGV 454
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
TP L++ L+ + A G S C
Sbjct: 455 EPQQHVLTPMLVRVLDATPILRIATGASASHCF 487
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 139/346 (40%), Gaps = 82/346 (23%)
Query: 90 GCVYATGLNDFGQLGISENIGYSL---EPLRISGLKKEVVQ-----ISTGYHHSSAITVD 141
G V+A G GQLG+ ++L EP + + I+ G H+ VD
Sbjct: 83 GSVWAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIACGRAHT-LFLVD 141
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G++Y G N GQLG K +K P +V+ L Q A G S+A+T G+V +W
Sbjct: 142 GQVYSCGSNDQGQLGHKKHRSK----PERVDALEPYTITQIACGETHSLALTSNGQVFAW 197
Query: 202 GAGGSGRLG-HGQESSILGFLRSTSEYT------------------------PRLIKELE 236
G + +LG ESS RS++ T PRL++ L
Sbjct: 198 GDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDFMTRPRLVRALT 257
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNE 296
G K+ G S + E G +++ WG N
Sbjct: 258 GHKIVQIVCGANFSLVLSERG------------------------------DVFAWGDNT 287
Query: 297 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSE 355
+G L + + + P V+ + P+ Q++ G +HT A++ G++ +WG
Sbjct: 288 SGQLCLRELKTVPVPTLVKELYG-IPIRQLAAGGRHTLALTFNGQVYSWG---------- 336
Query: 356 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
++ GQLG G+ + P+ + E+ ++CG +H+ L E
Sbjct: 337 --NNQFGQLGVGDTAPHTIPSRLKTLEHQFCAHIACGEDHSVVLTE 380
>gi|332243760|ref|XP_003271040.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Nomascus
leucogenys]
Length = 814
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 179/385 (46%), Gaps = 59/385 (15%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAVSKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVTNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
+ + EN +YT+G + G LG+G+
Sbjct: 255 TVVLTENA-------------------------------VYTFGLGQFGQLGLGTFLFET 283
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
S +V + + +SCG HTA I++ G + T+G G HG LG N
Sbjct: 284 SDPKVIENIRDQTISYISCGESHTALITDIGLMYTFG-DGRHGKLG---------LGLEN 333
Query: 369 DVDYIHPTIV-NFGENVKALQVSCG 392
++ PT+ NF + L V+CG
Sbjct: 334 FTNHFIPTLCSNFSRFIVKL-VACG 357
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 139/304 (45%), Gaps = 57/304 (18%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
V +S G HS+ +T + +LYM+G N+ GQLGLG K+A + PT V+ L K AA G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--VSKPTCVKALKPEKVKLAACG 95
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
++ T GG V + G G+LG G ++ F TSE+ K+
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI---------------- 284
K +AG SA + E+GR++++GD + ++ + + P +
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVTNVCVPQQVTIGKPVSWISCGYYHS 202
Query: 285 ----SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 338
+ GELY +G ENG LG+ + L R SE P V QV+CG +HT ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTG 397
+ T+G G GQLG G + + P ++ + +SCG +HT
Sbjct: 261 NAVYTFGLG------------QFGQLGLGTFLFETSDPKVIENIRDQTISYISCGESHTA 308
Query: 398 ALLE 401
+ +
Sbjct: 309 LITD 312
>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
CCMP2712]
Length = 413
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 145/323 (44%), Gaps = 57/323 (17%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKK-EVVQISTGYHHSS 136
G H L +T G VY+ G N+ GQLG+ S + SL L + LK V+ S YHHS
Sbjct: 144 GAEHVLVVTSAGQVYSCGCNNHGQLGLGSTKMSPSL--LLVESLKHVRVLSASCSYHHSV 201
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
++ DG + +G N GQLG+G + ++ +P +VE S + AA G ++ +T G
Sbjct: 202 VVSSDGSAFSFGLNDCGQLGIGTRPNQL--LPHRVELPSPHLVRLAACGQYHTIFLTEEG 259
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
V S G +G+LG G SS P LI L+ + A G+ H+ + E+
Sbjct: 260 MVFSCGKNLNGQLGLGSRSST---------NVPTLIAALQERPASMIACGYSHTCVVLED 310
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
G+ L+T+G N G LG+G D + SP +V+
Sbjct: 311 GK------------------------------LFTFGYNHQGQLGLGHTDSVSSPMQVE- 339
Query: 317 PFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 376
V ++SCG T +SE L W +G + GQLG G+ D + P
Sbjct: 340 TLRNVKVVKISCGTHFTCVLSESGEL-WSFGC----------NCHGQLGLGDSTDRLVPV 388
Query: 377 IVNFGENVKALQVSCGFNHTGAL 399
+V +++CGF+H A+
Sbjct: 389 LVPSMTKKNLSEIACGFHHLVAI 411
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 154/371 (41%), Gaps = 66/371 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G G LG + + + + + + +A G + FLTE G VY GLN GQ
Sbjct: 45 CGQNRKGELGHSTFREQVEMSLVQSLRRKRIVKVAAGSETSYFLTEEGKVYCCGLNSTGQ 104
Query: 103 LGISENIG-------YSLEPLRISGLKKE--VVQIS--TGYHHSSAITVDGELYMWGKNS 151
L + G YS + + GL + VVQ+S G H +T G++Y G N+
Sbjct: 105 LARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQVYSCGCNN 164
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+GQLGLG + K+ P VE L + A+ + SV V+ G S+G G+LG
Sbjct: 165 HGQLGLG--STKMSPSLLLVESLKHVRVLSASCSYHHSVVVSSDGSAFSFGLNDCGQLGI 222
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G + L P ++ V++AA G H+ + E G V+
Sbjct: 223 GTRPNQL---------LPHRVELPSPHLVRLAACGQYHTIFLTEEGMVF----------- 262
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 331
+ G N NG LG+GS + P + E P ++CG+
Sbjct: 263 -------------------SCGKNLNGQLGLGSRSSTNVPTLI-AALQERPASMIACGYS 302
Query: 332 HTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 390
HT + E GK+ T+G+ + GQLG G+ P V NVK +++S
Sbjct: 303 HTCVVLEDGKLFTFGY------------NHQGQLGLGHTDSVSSPMQVETLRNVKVVKIS 350
Query: 391 CGFNHTGALLE 401
CG + T L E
Sbjct: 351 CGTHFTCVLSE 361
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 134/296 (45%), Gaps = 44/296 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G ++G+LGLGS + ++ + + + + +C H++ ++ G ++ GLND GQ
Sbjct: 160 CGCNNHGQLGLGSTKMSPSLLLVESLKHVRVLSASCSYHHSVVVSSDGSAFSFGLNDCGQ 219
Query: 103 LGISENIGYSLEPLRISGLKKEVVQIST-GYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LGI L P R+ +V+++ G +H+ +T +G ++ GKN NGQLGLG ++
Sbjct: 220 LGIGTRPN-QLLPHRVELPSPHLVRLAACGQYHTIFLTEEGMVFSCGKNLNGQLGLGSRS 278
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +PT + L A G+ + V GK+ ++G G+LG G S+
Sbjct: 279 S--TNVPTLIAALQERPASMIACGYSHTCVVLEDGKLFTFGYNHQGQLGLGHTDSV---- 332
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+P ++ L VKV + G H C+
Sbjct: 333 -----SSPMQVETLRNVKVVKISCG-THFTCV---------------------------- 358
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
L GEL+++G N +G LG+G P V ++ + +++CG+ H AIS
Sbjct: 359 -LSESGELWSFGCNCHGQLGLGDSTDRLVPVLVPS-MTKKNLSEIACGFHHLVAIS 412
>gi|15223423|ref|NP_174026.1| regulator of chromosome condensation-like protein [Arabidopsis
thaliana]
gi|124301018|gb|ABN04761.1| At1g27060 [Arabidopsis thaliana]
gi|332192654|gb|AEE30775.1| regulator of chromosome condensation-like protein [Arabidopsis
thaliana]
Length = 386
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 171/383 (44%), Gaps = 53/383 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG L+ P + S S+ LACGGAH + LT G V+ G GQ
Sbjct: 20 WGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGSSGQ 79
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + +L P +S V+ Q + G+ HS ++ G ++ G S GQLG G
Sbjct: 80 LGHGDILNITL-PKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHGDTL 138
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ + P KV + K A G S+ + G +V +G+G G+LG +
Sbjct: 139 S--LSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSD------- 189
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------------DRAVDK 269
R S P ++ L+ V+V +A HSA I +G+ + +G
Sbjct: 190 RIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRGFCGGPDVHAPQSLPSP 249
Query: 270 MLFQEG----NHARRPSLISGGELYTWGSN-----ENGCLGIGSIDVLHSPERVQGPFSE 320
+ F+E NHA L GE++ GS E L I S + L E+V F
Sbjct: 250 LSFREVAVGWNHALL--LTVDGEVFKLGSTLNKQPEKQQLQIDSSEALF--EKVP-DFDG 304
Query: 321 SPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
V Q++ G +H+AA++E G++ TWGWG GQLG GN D P +V+
Sbjct: 305 VKVMQIAAGAEHSAAVTENGEVKTWGWG------------EHGQLGLGNTNDQTSPELVS 352
Query: 380 FGE---NVKALQVSCGFNHTGAL 399
G K ++V CG T A+
Sbjct: 353 LGSIDLRTKEIKVYCGSGFTYAV 375
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 37/230 (16%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+++ WG ++GQLG K +++P + L I A G +A+T GGKV +WG
Sbjct: 16 QVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSI--SMLACGGAHVIALTSGGKVFTWG 73
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G SG+LGHG +I P+L+ + + AAAG+ HS + ++G ++
Sbjct: 74 RGSSGQLGHGDILNI---------TLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTC 124
Query: 263 GDRAVDKMLFQEGNHARRPS----------------------LISGGELYTWGSNENGCL 300
G+ + ++ + P+ L +G ++ +GS + G L
Sbjct: 125 GNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQL 184
Query: 301 GIGS--IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 347
G S I ++ P V G + V ++S H+AAIS +G+ +WG G
Sbjct: 185 GFSSDRIKSVNLPCVVSG-LKDVEVVRISANGDHSAAISADGQFFSWGRG 233
>gi|309792077|ref|ZP_07686551.1| regulator of chromosome condensation RCC1 [Oscillochloris
trichoides DG-6]
gi|308225884|gb|EFO79638.1| regulator of chromosome condensation RCC1 [Oscillochloris
trichoides DG6]
Length = 778
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 156/357 (43%), Gaps = 59/357 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN ++G+LG G+ R PV + + A+A G AHT LT +G V G N+ GQ
Sbjct: 80 WGNNEFGQLGDGTTIQRNTPVAVNGLSS-GVVAIAAGYAHTCALTTSGGVSCWGNNESGQ 138
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I P++++GL V I+ G +H+ A+T DG + WG N GQLG G
Sbjct: 139 LGNGITI-QRRTPVQVAGLSSGVAAIAAGEYHTCALTTDGAVTCWGSNGYGQLGDGTTTQ 197
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V LS T A G + A+T GG V WG G+G+LG G
Sbjct: 198 RSTPV--QVAGLSSGVTAITA-GGSHTCALTTGGAVTCWGRNGNGQLGDG---------T 245
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T TP + L I A G VY +
Sbjct: 246 TTQRSTPVNVLGLSSEVAAITA------------GDVYTC-------------------A 274
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKIL 342
L +GG + WG+N +G LG G+ D +P V G S V ++ G HT AI+ G
Sbjct: 275 LTTGGGVTCWGANWSGQLGDGTTDERSTPVDVVGL--SSGVTAIAAGNDHTCAITTG--- 329
Query: 343 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G S G + QLG G P +VN G + +A ++ G HT A+
Sbjct: 330 --------GGVSCWGVNQYSQLGDGTTTQQSTPVVVN-GLSSRAAAIAAGDGHTCAM 377
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 167/382 (43%), Gaps = 54/382 (14%)
Query: 41 ALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+ WG Y +LG G+ + PVV + + A+A G HT +T G V G N
Sbjct: 333 SCWGVNQYSQLGDGTTTQQSTPVVVNGLSSRA-AAIAAGDGHTCAMTTGGGVSCWGRNWS 391
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQLG P+++ GL V I+ G H+ A++ +G + WG N +GQLG G
Sbjct: 392 GQLGDGTTT-QRRTPMQVEGLSSGVADITAGDSHTCALSTEGGVTCWGNNESGQLGDGTT 450
Query: 161 AAKVIPIPTKVECLS-GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P+ +VE LS G+ A G + A++ G V WG GSG+LG+G
Sbjct: 451 IQRSTPV--QVEGLSSGVVAITA--GDSHTCALSTEGGVTCWGGNGSGQLGNG------- 499
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---------------D 264
+T TP ++ L + I A G H+ + G V +G +
Sbjct: 500 --TTTQRSTPVQVEGLSSGVMAITA-GDSHTCALTTGGGVTCWGGNWYGQLGDGTTTQRN 556
Query: 265 RAVDKMLFQEGNHA------RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
V+ + G A +L + G + WG N LG G+ ++P +V+G
Sbjct: 557 MPVNVVGLSSGVAAIAAGGSHTCALSTEGGVTCWGWNTYDQLGDGTRTNHNTPVQVEGL- 615
Query: 319 SESPVDQVSCGWKHTAA-ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 377
S V ++ G+ HT A I+ G++ WGW + GQLG G + P +
Sbjct: 616 -SSGVAAIAAGYAHTCALITSGEVTCWGW------------NWYGQLGDGTTTQRMTPVV 662
Query: 378 VNFGENVKALQVSCGFNHTGAL 399
VN G + + + G+ HT AL
Sbjct: 663 VN-GLSSEVAAIVAGYAHTCAL 683
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 145/329 (44%), Gaps = 41/329 (12%)
Query: 41 ALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+ WG G+LG G+ R P+ + + G +HT L+ G V G N+
Sbjct: 384 SCWGRNWSGQLGDGTTTQRRTPMQVEGLSS-GVADITAGDSHTCALSTEGGVTCWGNNES 442
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQLG I S P+++ GL VV I+ G H+ A++ +G + WG N +GQLG G
Sbjct: 443 GQLGDGTTIQRS-TPVQVEGLSSGVVAITAGDSHTCALSTEGGVTCWGGNGSGQLGNGTT 501
Query: 161 AAKVIPIPTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P+ +VE L SG+ A G + A+T GG V WG G+LG G
Sbjct: 502 TQRSTPV--QVEGLSSGVMAITA--GDSHTCALTTGGGVTCWGGNWYGQLGDG------- 550
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM--------- 270
+T P + L IAA G H+ + G V +G D++
Sbjct: 551 --TTTQRNMPVNVVGLSSGVAAIAAGGS-HTCALSTEGGVTCWGWNTYDQLGDGTRTNHN 607
Query: 271 --LFQEG----------NHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
+ EG +A +LI+ GE+ WG N G LG G+ +P V G
Sbjct: 608 TPVQVEGLSSGVAAIAAGYAHTCALITSGEVTCWGWNWYGQLGDGTTTQRMTPVVVNGLS 667
Query: 319 SESPVDQVSCGWKHTAAISEGKILT-WGW 346
SE V + G+ HT A+S G +T WGW
Sbjct: 668 SE--VAAIVAGYAHTCALSTGGGVTCWGW 694
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 157/380 (41%), Gaps = 52/380 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ + R PV + A+A G HT +T G V G+N + Q
Sbjct: 284 WGANWSGQLGDGTTDERSTPVDVVGLSS-GVTAIAAGNDHTCAITTGGGVSCWGVNQYSQ 342
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ ++GL I+ G H+ A+T G + WG+N +GQLG G
Sbjct: 343 LGDGTTTQQS-TPVVVNGLSSRAAAIAAGDGHTCAMTTGGGVSCWGRNWSGQLGDGTTTQ 401
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +VE LS A G + A++ G V WG SG+LG G R
Sbjct: 402 RRTPM--QVEGLSSGVADITA-GDSHTCALSTEGGVTCWGNNESGQLGDGTT-----IQR 453
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP- 281
S TP ++ L V I AG H+ + G V +G ++ P
Sbjct: 454 S----TPVQVEGLSSGVVAI-TAGDSHTCALSTEGGVTCWGGNGSGQLGNGTTTQRSTPV 508
Query: 282 --------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L +GG + WG N G LG G+ + P V G S
Sbjct: 509 QVEGLSSGVMAITAGDSHTCALTTGGGVTCWGGNWYGQLGDGTTTQRNMPVNVVGL--SS 566
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
V ++ G HT A+S EG + WGW T+ QLG G ++ P V
Sbjct: 567 GVAAIAAGGSHTCALSTEGGVTCWGW----NTYD--------QLGDGTRTNHNTPVQVE- 613
Query: 381 GENVKALQVSCGFNHTGALL 400
G + ++ G+ HT AL+
Sbjct: 614 GLSSGVAAIAAGYAHTCALI 633
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 124/302 (41%), Gaps = 36/302 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV + A+ G +HT LT G V G N +GQ
Sbjct: 488 WGGNGSGQLGNGTTTQRSTPVQVEGLSS-GVMAITAGDSHTCALTTGGGVTCWGGNWYGQ 546
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ P+ + GL V I+ G H+ A++ +G + WG N+ QLG G +
Sbjct: 547 LGDGTTTQRNM-PVNVVGLSSGVAAIAAGGSHTCALSTEGGVTCWGWNTYDQLGDGTRTN 605
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P+ +VE LS AA G+ + A+ G+V WG G+LG G
Sbjct: 606 HNTPV--QVEGLSSGVAAIAA-GYAHTCALITSGEVTCWGWNWYGQLGDG---------T 653
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------------------- 263
+T TP ++ L +V AG+ H+ + G V +G
Sbjct: 654 TTQRMTPVVVNGLSS-EVAAIVAGYAHTCALSTGGGVTCWGWNKYYQLGNGTISQRSIPM 712
Query: 264 --DRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
D + A L +GG + WG + G LG+G+I +P V F
Sbjct: 713 DVDGLSSGVAALAAGDAHTCGLSTGGGVTCWGWDVYGQLGVGTIAYRTTPVDVTVLFVYL 772
Query: 322 PV 323
PV
Sbjct: 773 PV 774
>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
Length = 1086
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 164/374 (43%), Gaps = 72/374 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + A +++ +ACG HT +T +G +Y G ++
Sbjct: 334 WGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNS 393
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 394 GLLGHGNEVSHWV-PKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG 452
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 453 DRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 510
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L F AC
Sbjct: 511 GRLGHGDKDTRL---------VPTCVAAL-------VEPNFCQIAC-------------- 540
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
H +L + G +YT GS G LG D + P RV+G ++ V+++
Sbjct: 541 ---------GHCMTVALTTSGHVYTMGSPVYGQLGNPQADGML-PVRVEGKLHKNFVEEI 590
Query: 327 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 385
SCG H A + S ++ TWG G + G+LGHG+ D PT+V ++ +
Sbjct: 591 SCGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRSSPTLVEALKDKQ 638
Query: 386 ALQVSCGFNHTGAL 399
V CG N T A+
Sbjct: 639 VRTVVCGINFTAAI 652
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 126/302 (41%), Gaps = 71/302 (23%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL + +K +V IS G H++ +T GE+Y WG+ S G+LG G +P P ++
Sbjct: 302 KPLEFA-VKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCD--VPQPKLIDA 358
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ + + A G + AVT G + +WG G SG LGHG E S + P+
Sbjct: 359 LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNE---------VSHWVPKR 409
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
+ LEG+ V + G H+A + G+++ FGD +
Sbjct: 410 VNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSF----------------------- 446
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------------ 338
G LG G L P V+ V + +CG HTAA+ E
Sbjct: 447 -------GVLGHGDRQSLSVPREVESLKGLRTV-RAACGVWHTAAVVEVMVGNSSSSNCS 498
Query: 339 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
GKI TWG G G+LGHG+ + PT V Q++CG T
Sbjct: 499 SGKIFTWGDGDK------------GRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTV 546
Query: 398 AL 399
AL
Sbjct: 547 AL 548
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 104/241 (43%), Gaps = 56/241 (23%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
IP +E + + + G + VT G++ SWG GRLGHG + +
Sbjct: 300 IPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDV--------- 350
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
P+LI L + +++ A G H+ +
Sbjct: 351 PQPKLIDALANMNIELVACGEYHTCAV------------------------------TLS 380
Query: 287 GELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 342
G+LYTWG ++ +G LG G+ +V H P+RV GP V +SCG HTA + S G++
Sbjct: 381 GDLYTWGNGTSNSGLLGHGN-EVSHWVPKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLF 439
Query: 343 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 402
T+G G S G LGHG+ P V + ++ ++ +CG HT A++E
Sbjct: 440 TFGDG------------SFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEV 487
Query: 403 V 403
+
Sbjct: 488 M 488
>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
Length = 985
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 165/341 (48%), Gaps = 53/341 (15%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
G +HTL L G V+A G ND+GQLG + I + P+ + GL K V IS G ++S A+
Sbjct: 183 GESHTLALESDGTVWACGENDYGQLGNNNTIDIN-SPIPVEGLNK-VSSISAGKYYSMAL 240
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
DG ++ WG+N GQLG G A ++ P+ +V+ LSGI + G S+A+ G V
Sbjct: 241 KSDGTVWTWGENDYGQLGDGTTATRLSPV--QVQNLSGIIAISS--GNSHSLALKDDGTV 296
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
+WG SG+LG G + S+Y P ++ L G+ V I + GF +S + +G
Sbjct: 297 WAWGDNESGQLGDG---------TTNSKYIPSQVQGLSGI-VSI-SCGFYYSMALKNDGT 345
Query: 259 VYIFGDRAVDKM---LFQEGNHARRPSLISG-----------------GELYTWGSNENG 298
V+++GD ++ + N A S + G G ++TWG N G
Sbjct: 346 VWVWGDNTSGQLGDGTTTDRNTAVPVSGLDGVIAIACGVNHSMALRNDGTVWTWGFNAFG 405
Query: 299 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGH 358
LG G+ ++ + G + ++CG H+ A+ + + W WG +
Sbjct: 406 QLGDGTKVSKNTAVPISGL---DGIIAITCGTSHSMALKDDGTV-WAWGDNQ-------- 453
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
GQLG+G + P+ V+ +K+ + CG++ + AL
Sbjct: 454 --YGQLGNGTFISNTTPSQVSNLSGIKS--IFCGYSTSFAL 490
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 174/378 (46%), Gaps = 59/378 (15%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G DYG+LG + P+ K S +++ G +++ L G V+ G ND+GQL
Sbjct: 200 GENDYGQLGNNNTIDINSPIPVEGLNKVS--SISAGKYYSMALKSDGTVWTWGENDYGQL 257
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
G L P+++ L ++ IS+G HS A+ DG ++ WG N +GQLG G +K
Sbjct: 258 G-DGTTATRLSPVQVQNLSG-IIAISSGNSHSLALKDDGTVWAWGDNESGQLGDGTTNSK 315
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
IP++V+ LSGI + + GF S+A+ G V WG SG+LG G +
Sbjct: 316 Y--IPSQVQGLSGIVS--ISCGFYYSMALKNDGTVWVWGDNTSGQLGDG---------TT 362
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA----------------- 266
T T + L+GV A G HS + +G V+ +G A
Sbjct: 363 TDRNTAVPVSGLDGVIA--IACGVNHSMALRNDGTVWTWGFNAFGQLGDGTKVSKNTAVP 420
Query: 267 ---VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
+D ++ + +L G ++ WG N+ G LG G+ +P +V + S +
Sbjct: 421 ISGLDGIIAITCGTSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTTPSQVS---NLSGI 477
Query: 324 DQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT-IVNFG 381
+ CG+ + A+ +G + W W G++ G+LG G I+PT +N G
Sbjct: 478 KSIFCGYSTSFALKPDGTV--WAW----------GNNEYGELGKGFTTRVIYPTETLNIG 525
Query: 382 ENVKALQVSCGFNHTGAL 399
+ +KA +S G +H AL
Sbjct: 526 D-IKA--ISIGSSHCLAL 540
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 173/380 (45%), Gaps = 61/380 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG DYG+LG G+ +R PV + A++ G +H+L L + G V+A G N+ GQ
Sbjct: 249 WGENDYGQLGDGTTATRLSPVQVQNLS--GIIAISSGNSHSLALKDDGTVWAWGDNESGQ 306
Query: 103 LGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + N Y P ++ GL +V IS G+++S A+ DG +++WG N++GQLG G
Sbjct: 307 LGDGTTNSKYI--PSQVQGLSG-IVSISCGFYYSMALKNDGTVWVWGDNTSGQLGDGTTT 363
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P V L G+ A G S+A+ G V +WG G+LG G +
Sbjct: 364 DRNTAVP--VSGLDGVI--AIACGVNHSMALRNDGTVWTWGFNAFGQLGDGTK------- 412
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHA 278
S+ T I L+G+ G HS + ++G V+ +GD ++ F
Sbjct: 413 --VSKNTAVPISGLDGIIA--ITCGTSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTTP 468
Query: 279 RRPSLISG-----------------GELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSE 320
+ S +SG G ++ WG+NE G LG G + V++ E +
Sbjct: 469 SQVSNLSGIKSIFCGYSTSFALKPDGTVWAWGNNEYGELGKGFTTRVIYPTET----LNI 524
Query: 321 SPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
+ +S G H A+ ++G + W WG + GQLG G P V+
Sbjct: 525 GDIKAISIGSSHCLALKNDGTV--WAWGDNR----------YGQLGDGTTTIKSLPVQVS 572
Query: 380 FGENVKALQVSCGFNHTGAL 399
+ A +S G +H+ AL
Sbjct: 573 GISGITA--ISAGGSHSLAL 590
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 152/385 (39%), Gaps = 92/385 (23%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG LG G P +KA++ G +H L L G V+A G N +GQ
Sbjct: 499 WGNNEYGELGKGFTTRVIYP--TETLNIGDIKAISIGSSHCLALKNDGTVWAWGDNRYGQ 556
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG SL P+++SG+ + IS G HS A+ DG ++ WG+N+ GQLG G K
Sbjct: 557 LGDGTTTIKSL-PVQVSGISG-ITAISAGGSHSLALKSDGTVWAWGQNNVGQLGDGTKED 614
Query: 163 KVIPI--------------------------------------------PTKVECLSGIF 178
+ P+ P ++ LSGI
Sbjct: 615 RNTPVQVSELSGITVISNCIYRSFALKNDGTVWVWGSDSYNLPLEKMTMPIQISGLSGII 674
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
+ G ++A+ G V +WG G+ G G +T+ P + L GV
Sbjct: 675 AIEC--GTYHNLALKNDGTVWAWGKNNFGQFGDG---------TTTTTNIPVQVSGLSGV 723
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGD----------------RAVDKMLFQEGNHARRPS 282
K A G S + +G V+ +G R VD L + + + +
Sbjct: 724 KA--IAVGGNRSIALKSDGTVWQWGRILVSVSPSTVETWTTARQVDG-LSEIVSISNNVA 780
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKIL 342
L + G+++TWG+N+ G LG G+ + V G E S +++G I
Sbjct: 781 LKNDGKVFTWGANDYGQLGDGTTTARVTVAPVSGL--EGVAGVASSDTTSMVLMNDGTIR 838
Query: 343 TWGWGGSHGTFSEDGHSSGGQLGHG 367
W G ++ GQLG+G
Sbjct: 839 AW------------GKNNFGQLGNG 851
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 125/280 (44%), Gaps = 63/280 (22%)
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
++ ++++S G H+ A+ DG ++ G+N GQLG PIP VE L+ + +
Sbjct: 173 IEGPIIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINSPIP--VEGLNKVSSI 230
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
A G S+A+ G V +WG G+LG G ++ L +P ++ L G+
Sbjct: 231 SA--GKYYSMALKSDGTVWTWGENDYGQLGDGTTATRL---------SPVQVQNLSGIIA 279
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCL 300
++G HS + ++G V + WG NE+G L
Sbjct: 280 --ISSGNSHSLALKDDGTV------------------------------WAWGDNESGQL 307
Query: 301 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHS 359
G G+ + + P +VQG S + +SCG+ ++ A+ ++G + W G +
Sbjct: 308 GDGTTNSKYIPSQVQGL---SGIVSISCGFYYSMALKNDGTVWVW------------GDN 352
Query: 360 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ GQLG G D V+ + V A ++CG NH+ AL
Sbjct: 353 TSGQLGDGTTTDRNTAVPVSGLDGVIA--IACGVNHSMAL 390
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 21/176 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG ++G+ G G+ + PV S +KA+A GG ++ L G V+ +G+
Sbjct: 695 WGKNNFGQFGDGTTTTTNIPVQVSGLS--GVKAIAVGGNRSIALKSDGTVW-----QWGR 747
Query: 103 LGIS---ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+ +S + ++ GL E+V IS ++ A+ DG+++ WG N GQLG G
Sbjct: 748 ILVSVSPSTVETWTTARQVDGLS-EIVSIS----NNVALKNDGKVFTWGANDYGQLGDGT 802
Query: 160 KAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
A+V P +E ++G+ + S+ + G + +WG G+LG+G+
Sbjct: 803 TTARVTVAPVSGLEGVAGVASSDTT-----SMVLMNDGTIRAWGKNNFGQLGNGER 853
>gi|145494340|ref|XP_001433164.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400281|emb|CAK65767.1| unnamed protein product [Paramecium tetraurelia]
Length = 401
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 173/372 (46%), Gaps = 60/372 (16%)
Query: 60 WRPVVCSAFEKHSLKALACGGAHTL---FLTETGCVYATGLNDFGQLGISENIG-YSLEP 115
WR + ++ LK G + T F+ +YA G N+FGQLGI +I YS +
Sbjct: 2 WRRAI-----QNCLKIAFIGSSITFTSSFVFSQEQLYAWGWNNFGQLGIGNSISQYSPQL 56
Query: 116 LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
+ I + V+ ++ S+AI G+LY WG++ G LG G+ + I IPT VECL
Sbjct: 57 VPI----QNVLFVACKSSVSAAIDKSGKLYTWGRSKFGLLGNGQ--VENINIPTLVECLK 110
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL---- 231
+ K A G A+T G++ +WG G+LGH ++ R EY L
Sbjct: 111 HLDFKYVACGNYHMAAITRDGQLYTWGNQDHGKLGHSFDNLAKLPSREKYEYQKNLGSAK 170
Query: 232 IKELEGVKVKI--AAAGFLHSACIDENGRVYIFG----------DRAVDKMLFQEGNHAR 279
+ EL + K+ + G + + ++G VY G + +++ F++ ++ +
Sbjct: 171 LPELVKLNFKVHQVSLGDQFTLILSDDGNVYSVGLNKKGILGYETKNAEELSFKQISNLK 230
Query: 280 R-----------PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 328
+L S G ++ WGSN G LG S V+ +P++++G + Q SC
Sbjct: 231 NIIQIDSGTDFSVALDSDGNMFAWGSNYFGQLGTPSPSVIQTPQQIKG---LPKIKQFSC 287
Query: 329 GWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 387
G + A+S +G + TWG+GG GQLG + D P ++F N+
Sbjct: 288 GEQFIGALSADGVLYTWGFGGD------------GQLGTPSKQDIPTPHKISFDHNID-- 333
Query: 388 QVSCGFNHTGAL 399
+VSCG H G +
Sbjct: 334 KVSCGQAHVGII 345
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 161/397 (40%), Gaps = 86/397 (21%)
Query: 27 CKRWISSTLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF 85
CK +S+ + + WG +G LG G +E+ P + + K +ACG H
Sbjct: 67 CKSSVSAAIDKSGKLYTWGRSKFGLLGNGQVENINIPTLVECLKHLDFKYVACGNYHMAA 126
Query: 86 LTETGCVYATGLNDFGQLGIS----------------ENIGYSLEPLRISGLKKEVVQIS 129
+T G +Y G D G+LG S +N+G + P + L +V Q+S
Sbjct: 127 ITRDGQLYTWGNQDHGKLGHSFDNLAKLPSREKYEYQKNLGSAKLP-ELVKLNFKVHQVS 185
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + ++ DG +Y G N G LG K A+ + ++ L I Q G + S
Sbjct: 186 LGDQFTLILSDDGNVYSVGLNKKGILGYETKNAEELSF-KQISNLKNII--QIDSGTDFS 242
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VA+ G + +WG+ G+LG S I TP+ IK L +K F+
Sbjct: 243 VALDSDGNMFAWGSNYFGQLGTPSPSVI---------QTPQQIKGLPKIKQFSCGEQFIG 293
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
+ D G LYTWG +G LG S +
Sbjct: 294 ALSAD--------------------------------GVLYTWGFGGDGQLGTPSKQDIP 321
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 369
+P ++ + +D+VSCG H IS K+ G G GQLG G++
Sbjct: 322 TPHKIS---FDHNIDKVSCGQAHVGIISNNKLYMHGRGKE------------GQLGRGSE 366
Query: 370 VDYIH-----PTIVNFGENVKALQVSCGFNHTGALLE 401
+ + P +V ENV L+++CG +H+ A++
Sbjct: 367 TESPNSSRYSPLLV--LENV--LKIACGGSHSFAIVN 399
>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1391
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 148/327 (45%), Gaps = 41/327 (12%)
Query: 53 LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGY 111
LG ++++PV SA E +K +ACG HTL +++ G V G ND GQ G++ +I
Sbjct: 69 LGQDRNQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQCGLATGDIEN 128
Query: 112 SLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
P + L + V++ G HS A+T DG L+ WG N+ GQLG+G PT+
Sbjct: 129 KPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTE 188
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
+ L G+ + A G S A+T G V WG G+LG G + ++ P
Sbjct: 189 LTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKE---------NKAYPT 239
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLI-- 284
L++ + VK A G H+A + +G V++FG + ++ + E N + L+
Sbjct: 240 LLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGS 299
Query: 285 -----------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
S G LY +G +G LG +P+RV GP+ V
Sbjct: 300 DITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRVPGPW-------VP 352
Query: 328 CGWKHTAAISEGKILTWGWGGSHGTFS 354
+ S+G+++ + G H FS
Sbjct: 353 HSSTEKNSSSKGRVVRCIYAGGHHCFS 379
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 153/346 (44%), Gaps = 54/346 (15%)
Query: 43 WGNGDYGRLGL--GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG D G+ GL G +E++ RP + + + CG H++ LT G +++ G N +
Sbjct: 451 WGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTY 510
Query: 101 GQLGISENI-GYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLGI + Y+ P ++ L+ +V+++ G HS A+T+ G ++ WGKN GQLGLG
Sbjct: 511 GQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLG 570
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
K K PT + + K A G + + +T G V +G G G+LGHG
Sbjct: 571 NKENK--SYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGS----- 623
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ +E PR + +L G + G H+ L EG
Sbjct: 624 ----NYNEVNPRKVIDLMGSDITQVTCGKHHT--------------------LVLEG--- 656
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
S G LY +G +G LG +P+RV GP+ S K+++ S+
Sbjct: 657 ------SKGRLYAFGQGIHGQLGQDEARSCSNPQRVPGPWVPH-----SSTAKNSS--SK 703
Query: 339 GKILTWGWGGSHGTFSEDGHSSGG---QLGHGNDVDYIHPTIVNFG 381
G+++ + G H FS +++ L + Y PT + G
Sbjct: 704 GRVVRCIYAGGHHCFSTATNAADNPELPLDFRDPTPYQQPTCLTEG 749
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 148/327 (45%), Gaps = 52/327 (15%)
Query: 101 GQLGISENIGYSLEPL--RISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQLGI G + + + ++ L + VQ IS G HH+ + DG LYM G NS GQLG
Sbjct: 12 GQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCGANSKGQLGQ 71
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ K P +V L + K A G + ++AV+ G+VL WG G+ G
Sbjct: 72 DRNQYK----PVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQCG------- 120
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE--G 275
L ++ PR++K L + G LHS + +GR++ +GD ++
Sbjct: 121 LATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVT 180
Query: 276 NHARRPS----------------------LISGGELYTWGSNENGCLGIGSIDVLHSPER 313
N+ RP+ L G ++ WG N+ G LG+G+ + P
Sbjct: 181 NYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKAYPTL 240
Query: 314 VQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
++ S+ V ++CG HTA ++ +G + +G G S GQLGHG++ +
Sbjct: 241 LRNMRSQM-VKHIACGQDHTAMLTADGGVFLFGQG------------SEGQLGHGSNYNE 287
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGAL 399
++P V QV+CG +HT L
Sbjct: 288 VNPRKVIDLMGSDITQVTCGKHHTLVL 314
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 181/408 (44%), Gaps = 73/408 (17%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ YG+LG+G+L + + RP ++ L +ACGG H+ LT +G V+ G ND
Sbjct: 165 WGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDV 224
Query: 101 GQLGI--SENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQLG+ EN Y P + ++ ++V+ I+ G H++ +T DG ++++G+ S GQLG
Sbjct: 225 GQLGLGNKENKAY---PTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGH 281
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG-GKVLSWGAGGSGRLGHGQESS 216
G +V P KV L G Q G ++ + G G++ ++G G G+LG + S
Sbjct: 282 GSNYNEV--NPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARS 339
Query: 217 ILGFLRSTSEYTPRLIKEL----EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
R + P E +G V+ AG H N D K+LF
Sbjct: 340 CSNPQRVPGPWVPHSSTEKNSSSKGRVVRCIYAGGHHCFSTATNA-----ADDIQIKLLF 394
Query: 273 QEGNHARRPSL--------------------------ISGGELYT-----------WGSN 295
++ + L ++ G+ +T WG N
Sbjct: 395 RDISTRIFFQLTXXXXXXXXXXXXXXXXXLETVVIKHVACGDDHTLAVSDRVQVLGWGRN 454
Query: 296 ENGCLGIGSIDVLHSPE-RVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTF 353
+ G G+ + D+ + P R+ + +V CG H+ A++ +G++ +W
Sbjct: 455 DRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSLHSMALTRDGRLFSW--------- 505
Query: 354 SEDGHSSGGQLGHGNDV-DYI-HPTIVNFGENVKALQVSCGFNHTGAL 399
G ++ GQLG G V +Y PT + V ++V+CG H+ AL
Sbjct: 506 ---GDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFAL 550
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 128/266 (48%), Gaps = 23/266 (8%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ YG+LG+G+L + + RP ++ L +ACGG H+ LT +G V+ G ND
Sbjct: 505 WGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDV 564
Query: 101 GQLGI--SENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQLG+ EN Y P + ++ ++V+ I+ G H++ +T DG ++++G+ S GQLG
Sbjct: 565 GQLGLGNKENKSY---PTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGH 621
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG-GKVLSWGAGGSGRLGHGQESS 216
G +V P KV L G Q G ++ + G G++ ++G G G+LG + S
Sbjct: 622 GSNYNEV--NPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARS 679
Query: 217 ILGFLRSTSEYTPRLI----KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
R + P +G V+ AG H N D + F
Sbjct: 680 CSNPQRVPGPWVPHSSTAKNSSSKGRVVRCIYAGGHHCFSTATNA-----ADNPELPLDF 734
Query: 273 QEGNHARRPSLISGG---ELYTWGSN 295
++ ++P+ ++ G EL T+G N
Sbjct: 735 RDPTPYQQPTCLTEGLIKELSTFGPN 760
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 163/406 (40%), Gaps = 69/406 (16%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLT-ETGCVYATGLNDF 100
L+G G G+LG GS + P + + CG HTL L G +YA G
Sbjct: 270 LFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIH 329
Query: 101 GQLGISENIGYSLEPLRISGL-------------KKEVVQ-ISTGYHH--SSAITV--DG 142
GQLG E S P R+ G K VV+ I G HH S+A D
Sbjct: 330 GQLGQDEARSCS-NPQRVPGPWVPHSSTEKNSSSKGRVVRCIYAGGHHCFSTATNAADDI 388
Query: 143 ELYMWGKNSNG----QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
++ + ++ + QL L + K A G + ++AV+ +V
Sbjct: 389 QIKLLFRDISTRIFFQLTXXXXXXXXXXXXXXXXXLETVVIKHVACGDDHTLAVSDRVQV 448
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
L WG G+ G L ++ PR+++ L + G LHS + +GR
Sbjct: 449 LGWGRNDRGQCG-------LATGDIENKPRPRILRHLASYQFVKVCCGSLHSMALTRDGR 501
Query: 259 VYIFGDRAVDKMLFQE--GNHARRPS----------------------LISGGELYTWGS 294
++ +GD ++ N+ RP+ L G ++ WG
Sbjct: 502 LFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGK 561
Query: 295 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTF 353
N+ G LG+G+ + P ++ S+ V ++CG HTA ++ +G + +G G
Sbjct: 562 NDVGQLGLGNKENKSYPTLLRNMRSQM-VKHIACGQDHTAMLTADGGVFLFGQG------ 614
Query: 354 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
S GQLGHG++ + ++P V QV+CG +HT L
Sbjct: 615 ------SEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVL 654
>gi|78190492|ref|NP_001030025.1| X-linked retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 180/388 (46%), Gaps = 59/388 (15%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
+ + EN +YT+G + G LG+G+
Sbjct: 255 TVVLTENA-------------------------------VYTFGLGQFGQLGLGTFLFET 283
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
S +V + + +SCG HTA I++ G + T+G G HG LG N
Sbjct: 284 SEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG-DGRHGKLG---------LGLEN 333
Query: 369 DVDYIHPTIV-NFGENVKALQVSCGFNH 395
++ PT+ NF + L V+CG H
Sbjct: 334 FTNHFIPTLCSNFLRFIVKL-VACGGCH 360
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 57/304 (18%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
V +S G HS+ +T + +LYM+G N+ GQLGLG K+A I PT V+ L K AA G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
++ T GG V + G G+LG G ++ F TSE+ K+
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI---------------- 284
K +AG SA + E+GR++++GD + ++ + ++ P +
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202
Query: 285 ----SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 338
+ GELY +G ENG LG+ + L R SE P V QV+CG +HT ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTG 397
+ T+G G GQLG G + + P ++ + +SCG NHT
Sbjct: 261 NAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTA 308
Query: 398 ALLE 401
+ +
Sbjct: 309 LITD 312
>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
rotundata]
Length = 4755
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 139/323 (43%), Gaps = 38/323 (11%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G +S P + + + +K +A GG H L L+ G VY+ G D G
Sbjct: 3954 GYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4013
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + Y L L E+V ++ G HHS+AIT G LY WGK G+LG G
Sbjct: 4014 KLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSE 4073
Query: 162 AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P VE L A G Q++ VT V SWG G G+LG G
Sbjct: 4074 DQL--TPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4125
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P I+ L G+ V G S + +G +Y +G ++ +H R
Sbjct: 4126 ---SDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHGTDDHVR 4182
Query: 280 RPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
RP ++ GE++TWG N+ G LG G+ L P V
Sbjct: 4183 RPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTCALQRPRLVHA- 4241
Query: 318 FSESPVDQVSCGWKHTAAISEGK 340
+ +V+CG HT A S K
Sbjct: 4242 LQGKKITRVACGSAHTLAWSTMK 4264
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 138/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S +P + + + ++ +ACG H+ +T +G +Y GL ++G+
Sbjct: 3020 WGEGEDGKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAITSSGELYTWGLGEYGR 3079
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGK 159
LG + L+P + L + V+Q++ G + A+T DG +Y WG G+LG G
Sbjct: 3080 LGHGDT-NTQLKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG 3138
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P+ V+ L+G+ Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3139 SDGCYTPL--LVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV-- 3194
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P L++ L G KV A G LH + + G+V
Sbjct: 3195 -------RKPTLVEGLRGKKVIHVAVGALHCLAVTDTGQV-------------------- 3227
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
Y WG N++G G GS V P V ++ V++VSCG H+ A
Sbjct: 3228 ----------YAWGDNDHGQQGNGSTIVNKKPSLVHE-LDDARVNRVSCGSSHSIA 3272
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 169/386 (43%), Gaps = 57/386 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG PV+C + L GG TLF +T G VYATG G
Sbjct: 3901 WGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLT-GGEQTLFAVTADGKVYATGYGAVG 3959
Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S + LE ++ +KK V +++G H A++ +G +Y WG+ +G+LG
Sbjct: 3960 RLGIGGTDSVMMPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4017
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P +E L G A G S A+T G + +WG G GRLGHG
Sbjct: 4018 GNRLS--YDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 4071
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + TP+L++ L+ KV A +G + C+ ++ V+ +GD K+
Sbjct: 4072 -----SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4126
Query: 276 NHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + P +L G +YTWG + LG G+ D + P +
Sbjct: 4127 DGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHGTDDHVRRPRK 4186
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V + ++ G H A S+ G++ TW G + GQLG G
Sbjct: 4187 VAA-LQGKKIISIATGSLHCVACSDKGEVFTW------------GDNDEGQLGDGTTCAL 4233
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGA 398
P +V+ + K +V+CG HT A
Sbjct: 4234 QRPRLVHALQGKKITRVACGSAHTLA 4259
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 176/377 (46%), Gaps = 67/377 (17%)
Query: 34 TLQRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFL-TETGC 91
T Q +WG D +LG G S+ + PV + K +A GG+ TLF+ ++ G
Sbjct: 2905 TPQHSAVYVWGLNDKDQLG-GLKGSKIKLPVYSESLSKLKPVHIA-GGSKTLFVVSQEGK 2962
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWG 148
+YA G G+LG+ ++ G + EP I L + V++ + +G H+ A+T DG ++ WG
Sbjct: 2963 LYACGEGTNGRLGLGDD-GNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSWG 3021
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
+ +G+LG G ++ + P +E L + A G S A+T G++ +WG G GR
Sbjct: 3022 EGEDGKLGHGNCSS--LDKPRLIESLKSKRIRDVACGSGHSAAITSSGELYTWGLGEYGR 3079
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + ++ P+L++ L G +V + AC G R
Sbjct: 3080 LGHGD---------TNTQLKPKLVQSLVGQRV-------IQVAC----------GSRDAQ 3113
Query: 269 KMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQ 325
M +L + G +Y+WG + G LG G D ++P +R+ G V Q
Sbjct: 3114 TM-----------ALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNG----LGVVQ 3158
Query: 326 VSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 384
+ CG + + A+++ G++ TWG G +LGHGND PT+V
Sbjct: 3159 IECGAQFSLALTKYGEVWTWGKGDYF------------RLGHGNDHHVRKPTLVEGLRGK 3206
Query: 385 KALQVSCGFNHTGALLE 401
K + V+ G H A+ +
Sbjct: 3207 KVIHVAVGALHCLAVTD 3223
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 139/316 (43%), Gaps = 59/316 (18%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
VY GLND QLG + L S K + V I+ G ++ +G+LY G+ +
Sbjct: 2911 VYVWGLNDKDQLGGLKGSKIKLPVYSESLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGT 2970
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG P P + LS K+ A+ G + ++A+T G+V SWG G G+L
Sbjct: 2971 NGRLGLGDDGNACEPKP--IPFLSQYVIKKVAVHSGGKHALALTQDGRVFSWGEGEDGKL 3028
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG SS+ PRLI+ L+ +++ A G HSA I
Sbjct: 3029 GHGNCSSL---------DKPRLIESLKSKRIRDVACGSGHSAAI---------------- 3063
Query: 270 MLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 329
S GELYTWG E G LG G + P+ VQ + V QV+CG
Sbjct: 3064 --------------TSSGELYTWGLGEYGRLGHGDTNTQLKPKLVQSLVGQR-VIQVACG 3108
Query: 330 WKHT---AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
+ A ++G + +WG G F G+LG G P +V+ +
Sbjct: 3109 SRDAQTMALTADGSVYSWG----DGDF--------GKLGRGGSDGCYTPLLVDRLNGLGV 3156
Query: 387 LQVSCGFNHTGALLEY 402
+Q+ CG + AL +Y
Sbjct: 3157 VQIECGAQFSLALTKY 3172
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 149/337 (44%), Gaps = 51/337 (15%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
+G +Y G N GQLG E L L S VQ++ G A+T DG++Y G
Sbjct: 3895 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATG 3954
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGS 206
+ G+LG+G + +PT +E + +F K+ A+ G + +A++ G V SWG G
Sbjct: 3955 YGAVGRLGIG--GTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDD 4012
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--- 263
G+LGHG L + R P+LI+EL G ++ A G HSA I G +Y +G
Sbjct: 4013 GKLGHGNR---LSYDR------PKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGR 4063
Query: 264 ----------DRAVDKMLFQEGNH-----------ARRPSLISGGELYTWGSNENGCLGI 302
D+ K++ ++ A+ + +++WG + G LG
Sbjct: 4064 YGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4123
Query: 303 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 361
G D P +++ + V +V CG + + A++ G I TWG G H
Sbjct: 4124 GGSDGCKVPMKIES-LAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYH----------- 4171
Query: 362 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+LGHG D P V + K + ++ G H A
Sbjct: 4172 -RLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA 4207
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 122/270 (45%), Gaps = 45/270 (16%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
G H L LTE VY+ G D G+LG + Y L S + K + I+ G +S+A++
Sbjct: 515 GKHYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAALS 574
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGK 197
+GELY WG+ + G+LG G + + +PT V L+G A G Q++ VT G
Sbjct: 575 SNGELYTWGRGNYGRLGHGN--SDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGI 632
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V SWG G G+LG G TP+++ +L + V
Sbjct: 633 VFSWGDGDYGKLGRGG---------CNGSKTPKIVDKLLDINV----------------A 667
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
+VY G + +L + GE+YTWG E LG G+ + + P+ ++
Sbjct: 668 KVYCGGQFSA--------------ALTAYGEVYTWGKGEAYRLGHGNEEHVRYPKAIEA- 712
Query: 318 FSESPVDQVSCGWKHTAAISEGKILTWGWG 347
V ++ G H A++E + L +GWG
Sbjct: 713 LKTKKVKELCVGSLHVLALTEDQ-LVYGWG 741
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 15/224 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNGD GRLG G P + + ++ +ACG ++ L+ G +Y G ++G+
Sbjct: 530 WGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAALSSNGELYTWGRGNYGR 589
Query: 103 LGISENIGYSLEPLRISGLKKEV---VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG N + P +S L + V +G + +T G ++ WG G+LG G
Sbjct: 590 LG-HGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRG- 647
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P V+ L I + G + S A+T G+V +WG G + RLGHG E +
Sbjct: 648 -GCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEEHV-- 704
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+ I+ L+ KVK G LH + E+ VY +G
Sbjct: 705 -------RYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYGWG 741
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 145/374 (38%), Gaps = 76/374 (20%)
Query: 32 SSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
S TLQ A WG+ +G G GS P C A + +K L C + L+ +G
Sbjct: 432 SQTLQEVLA--WGSVKFG--GTGS-----SPFYCDAIAELGIKQLCCTERALMILSTSGN 482
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY---HHSSAITVDGELYMWG 148
VY Q P R+ G + V + + H A+T D +Y WG
Sbjct: 483 VYMMYYGSETQY-----------PQRVYGFSDKFVAMIASHPDGKHYLALTEDSSVYSWG 531
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
G+LG G + P +E L A G S A++ G++ +WG G GR
Sbjct: 532 NGDGGRLGHGDRTW--YEEPKLIESLVDKNITFIACGSTYSAALSSNGELYTWGRGNYGR 589
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG ++ P L+ L G + A G S +
Sbjct: 590 LGHGNSDDVM---------VPTLVSALNGHMIVYVACGSGDSQTL--------------- 625
Query: 269 KMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 328
+ + G +++WG + G LG G + +P+ V + V +V C
Sbjct: 626 -------------CVTASGIVFSWGDGDYGKLGRGGCNGSKTPKIVDK-LLDINVAKVYC 671
Query: 329 GWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 387
G + +AA++ G++ TWG G ++ +LGHGN+ +P + + K
Sbjct: 672 GGQFSAALTAYGEVYTWGKGEAY------------RLGHGNEEHVRYPKAIEALKTKKVK 719
Query: 388 QVSCGFNHTGALLE 401
++ G H AL E
Sbjct: 720 ELCVGSLHVLALTE 733
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 113/270 (41%), Gaps = 53/270 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E+VQ +Y+WG N QLG G K +K I +P E LS + A
Sbjct: 2891 EIVQEQASSQRGVETPQHSAVYVWGLNDKDQLG-GLKGSK-IKLPVYSESLSKLKPVHIA 2948
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + V+ GK+ + G G +GRLG G + + P+ I L +K
Sbjct: 2949 GGSKTLFVVSQEGKLYACGEGTNGRLGLGDDGNAC---------EPKPIPFLSQYVIKKV 2999
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
A +HS G HA +L G +++WG E+G LG G
Sbjct: 3000 A---VHSG-----------------------GKHAL--ALTQDGRVFSWGEGEDGKLGHG 3031
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGG 362
+ L P ++ S+ + V+CG H+AAI S G++ TWG G G
Sbjct: 3032 NCSSLDKPRLIESLKSKR-IRDVACGSGHSAAITSSGELYTWGLG------------EYG 3078
Query: 363 QLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
+LGHG+ + P +V + +QV+CG
Sbjct: 3079 RLGHGDTNTQLKPKLVQSLVGQRVIQVACG 3108
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 69/152 (45%), Gaps = 8/152 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G P + ++ + CGG + LT G VY G + +
Sbjct: 636 WGDGDYGKLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYR 695
Query: 103 LG--ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG E++ Y P I LK K+V ++ G H A+T D +Y WG+N GQ +
Sbjct: 696 LGHGNEEHVRY---PKAIEALKTKKVKELCVGSLHVLALTEDQLVYGWGRNDYGQ--IDP 750
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
++ PT LSG G QS A
Sbjct: 751 ALGTIVSEPTLCPTLSGKNVIGLVCGPTQSFA 782
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 81/216 (37%), Gaps = 55/216 (25%)
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A+T V SWG G GRLGHG T P+LI+ L + A G +
Sbjct: 519 LALTEDSSVYSWGNGDGGRLGHGDR---------TWYEEPKLIESLVDKNITFIACGSTY 569
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
SA +L S GELYTWG G LG G+ D +
Sbjct: 570 SA------------------------------ALSSNGELYTWGRGNYGRLGHGNSDDVM 599
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAI---SEGKILTWGWGGSHGTFSEDGHSSGGQLGH 366
P V + + V+CG + + + G + +WG G G+LG
Sbjct: 600 VPTLVSA-LNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGDY------------GKLGR 646
Query: 367 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 402
G P IV+ ++ +V CG + AL Y
Sbjct: 647 GGCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAY 682
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 29/141 (20%)
Query: 274 EGNHARRPSLISGGE-----------LYTWGSNENGCLGIGSIDVLHSP---ERVQGPFS 319
E A RP ++GGE +Y G G LGIG D + P E +Q F
Sbjct: 3924 ESLSALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMMPTLLESIQHVFV 3983
Query: 320 ESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
+ V+ G KH A+S EG + +WG G G+LGHGN + Y P ++
Sbjct: 3984 KKVA--VNSGGKHCLALSSEGHVYSWGEGDD------------GKLGHGNRLSYDRPKLI 4029
Query: 379 NFGENVKALQVSCGFNHTGAL 399
+ + V+CG +H+ A+
Sbjct: 4030 EELLGTEIVDVACGGHHSAAI 4050
>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
Length = 1132
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 164/374 (43%), Gaps = 72/374 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + A +++ +ACG HT +T +G +Y G ++
Sbjct: 380 WGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNS 439
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 440 GLLGHGNEVSHWV-PKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG 498
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 499 DRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 556
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L F AC
Sbjct: 557 GRLGHGDKDTRL---------VPTCVAAL-------VEPNFCQIAC-------------- 586
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
H +L + G +YT GS G LG D + P RV+G ++ V+++
Sbjct: 587 ---------GHCMTVALTTSGHVYTMGSPVYGQLGNPQADGML-PVRVEGKLHKNFVEEI 636
Query: 327 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 385
SCG H A + S ++ TWG G + G+LGHG+ D PT+V ++ +
Sbjct: 637 SCGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRSSPTLVEALKDKQ 684
Query: 386 ALQVSCGFNHTGAL 399
V CG N T A+
Sbjct: 685 VRTVVCGINFTAAI 698
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 126/302 (41%), Gaps = 71/302 (23%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL + +K +V IS G H++ +T GE+Y WG+ S G+LG G +P P ++
Sbjct: 348 KPLEFA-VKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCD--VPQPKLIDA 404
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ + + A G + AVT G + +WG G SG LGHG E S + P+
Sbjct: 405 LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNE---------VSHWVPKR 455
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
+ LEG+ V + G H+A + G+++ FGD +
Sbjct: 456 VNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSF----------------------- 492
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------------ 338
G LG G L P V+ V + +CG HTAA+ E
Sbjct: 493 -------GVLGHGDRQSLSVPREVESLKGLRTV-RAACGVWHTAAVVEVMVGNSSSSNCS 544
Query: 339 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
GKI TWG G G+LGHG+ + PT V Q++CG T
Sbjct: 545 SGKIFTWGDGDK------------GRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTV 592
Query: 398 AL 399
AL
Sbjct: 593 AL 594
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 104/241 (43%), Gaps = 56/241 (23%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
IP +E + + + G + VT G++ SWG GRLGHG + +
Sbjct: 346 IPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDV--------- 396
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
P+LI L + +++ A G H+ +
Sbjct: 397 PQPKLIDALANMNIELVACGEYHTCAV------------------------------TLS 426
Query: 287 GELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 342
G+LYTWG ++ +G LG G+ +V H P+RV GP V +SCG HTA + S G++
Sbjct: 427 GDLYTWGNGTSNSGLLGHGN-EVSHWVPKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLF 485
Query: 343 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 402
T+G G S G LGHG+ P V + ++ ++ +CG HT A++E
Sbjct: 486 TFGDG------------SFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEV 533
Query: 403 V 403
+
Sbjct: 534 M 534
>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 6906
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 153/372 (41%), Gaps = 69/372 (18%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G +YG L LG + S F S++++A G + L + G V+ GLN GQ
Sbjct: 3139 GQNNYGELCLGHCNPTNKLERASFFSYKSIQSIAGGNEVLVVLMKDGAVFTCGLNKSGQC 3198
Query: 104 GISENIGYSLEPLRI---SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GI + P I SG+ +V S G H AI+ DG +Y WG N GQLGLG
Sbjct: 3199 GIGNFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSWGYNDRGQLGLGTT 3258
Query: 161 AAKVIPIPTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--HGQESSI 217
+K P +E L F AA+ + S V+ G +L++G SG+LG H Q
Sbjct: 3259 VSKS-HTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDSGQLGLDHTQH--- 3314
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
++TP+L++ L KV A G H+ I ++G VY F
Sbjct: 3315 --------QHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSF--------------- 3351
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ-GPFSESPV-------DQVSCG 329
G NE G LG+ P V+ P +P+ QV CG
Sbjct: 3352 ---------------GKNEYGQLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCG 3396
Query: 330 WKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 388
+ HT I E GK++TW G + GQLG G+ V + +
Sbjct: 3397 YYHTVTILECGKVVTW------------GRNDYGQLGIGSKEHKSIAQFVPLPLTSRVKR 3444
Query: 389 VSCGFNHTGALL 400
SCG HT LL
Sbjct: 3445 ASCGCYHTLLLL 3456
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 147/332 (44%), Gaps = 48/332 (14%)
Query: 90 GCVYATGLNDFGQLGISENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
G +Y+ G N +G+LG+ ++I + L + + G + Q+ +G + +T DG + G
Sbjct: 348 GELYSCGQNSYGELGLGDDIERHQLTSVPLCGW-DHIRQVVSGNEILAILTSDGVVLTCG 406
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGGKVLSWGAGGS 206
N +GQ G G +V+ + ++ L K A+ G E +A+T G SWG
Sbjct: 407 LNKSGQCGHGNFDERVM-LLRPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWGYNDR 465
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH + L Y P+LI+ ++ K+K AA + HSA + +G +Y FG
Sbjct: 466 GQLGHENVGTKL--------YLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMND 517
Query: 267 VDKMLFQEGNHARRPSLISG----------------------GELYTWGSNENGCLGIGS 304
++ H P L+ GE++T G N++G LG+G
Sbjct: 518 CGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGH 577
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL 364
+ P +V P V V+CG+ H AI+ LT+ + G + GQL
Sbjct: 578 NKQVKVPTQVVLP--NELVCFVACGYYHATAITSTG-LTYSF----------GRNDYGQL 624
Query: 365 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
G G+ + P + N + + +CG HT
Sbjct: 625 GIGSKIHQNIPIALTISSNTRMVHAACGCYHT 656
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 114/231 (49%), Gaps = 20/231 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG D G+LGLG+ S+ V+ S EK+ + A H+ ++ G + G+ND
Sbjct: 3245 WGYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDS 3304
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+ ++ + P + L + V +++ G +H+ AI DG++Y +GKN GQLGL
Sbjct: 3305 GQLGL-DHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLSH 3363
Query: 160 KAAKVIPIPTKV------ECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+P+ K+ L + Q G+ +V + GKV++WG G+LG G
Sbjct: 3364 TQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRNDYGQLGIG 3423
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ +S +++ P + +VK A+ G H+ + NGR +FG
Sbjct: 3424 SKEH-----KSIAQFVPLPLTS----RVKRASCGCYHTLLLLVNGRPMVFG 3465
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 139/305 (45%), Gaps = 22/305 (7%)
Query: 1 MLGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESR- 59
ML R + A+ + +K + + G C+ I+ T A WG D G+LG ++ ++
Sbjct: 423 MLLRPIQALRSHRVKY---INASNG-CEHLIAIT-DTGLAYSWGYNDRGQLGHENVGTKL 477
Query: 60 WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
+ P + + ++ +K+ A H+ ++ +G +Y G+ND GQLG+ S L +
Sbjct: 478 YLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGLDHTQHQSTPQLVKA 537
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L V +S G +H T+ GE++ GKN +GQLGLG K + +PT+V L
Sbjct: 538 LLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHN--KQVKVPTQV-VLPNELV 594
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
A G+ + A+T G S+G G+LG G + + P + +
Sbjct: 595 CFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSK---------IHQNIPIALTISSNTR 645
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AA G H+ + ++G+V++FG ++ GN SL+ N C
Sbjct: 646 MVHAACGCYHTLLMSDSGQVFVFGRNNKGQL----GNRGNTDSLLPVPLKVRPEKNMRRC 701
Query: 300 LGIGS 304
L I +
Sbjct: 702 LHIAA 706
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 141/325 (43%), Gaps = 69/325 (21%)
Query: 92 VYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGK 149
+++ G N++G+L + N LE R S + +Q I+ G + DG ++ G
Sbjct: 3135 IFSCGQNNYGELCLGHCNPTNKLE--RASFFSYKSIQSIAGGNEVLVVLMKDGAVFTCGL 3192
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSG 207
N +GQ G+G ++I +P+ + LSGI A G E +A++ G V SWG G
Sbjct: 3193 NKSGQCGIGNFDERLI-VPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSWGYNDRG 3251
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
+LG G S +TPR+I+ L E + AA + HSA + NG
Sbjct: 3252 QLGLGTTVS--------KSHTPRVIESLREKYFITFAAVSYHHSAVVSNNG--------- 3294
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
+L T+G N++G LG+ H+P+ V+ S V +V
Sbjct: 3295 ---------------------DLLTFGMNDSGQLGLDHTQHQHTPQLVET-LSSQKVGRV 3332
Query: 327 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV- 384
+CG HT AI +G + ++G + GQLG + + P +V
Sbjct: 3333 ACGLYHTVAIVDDGDVYSFG------------KNEYGQLGLSHTQNTKVPMLVKIPPAPR 3380
Query: 385 --------KALQVSCGFNHTGALLE 401
KA+QV CG+ HT +LE
Sbjct: 3381 TPMLDAVNKAVQVYCGYYHTVTILE 3405
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 88/186 (47%), Gaps = 19/186 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G D G+LGL + + P + + +ACG HT+ + + G VY+ G N++GQ
Sbjct: 3299 FGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQ 3358
Query: 103 LGISENIGYSLEPL-------RISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
LG+S + L R L + VQ+ GY+H+ I G++ WG+N G
Sbjct: 3359 LGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRNDYG 3418
Query: 154 QLGLGKKA----AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
QLG+G K A+ +P+P K+A+ G ++ + G+ + +G G+L
Sbjct: 3419 QLGIGSKEHKSIAQFVPLPLTSR------VKRASCGCYHTLLLLVNGRPMVFGRNNKGQL 3472
Query: 210 GHGQES 215
G S
Sbjct: 3473 GVASRS 3478
>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
Length = 1423
Score = 116 bits (290), Expect = 2e-23, Method: Composition-based stats.
Identities = 100/323 (30%), Positives = 152/323 (47%), Gaps = 41/323 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R P S+ ++ G +H+L LT+ G V+A GLN GQ
Sbjct: 94 WGDNTNGQLGDGTTTGRQTPTPAQGLP--SVAQVSAGESHSLALTDDGRVFAWGLNSSGQ 151
Query: 103 LGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG S P+++ GL + + ++ G +HS A+T DG ++ WGKNS+GQLG
Sbjct: 152 LG-DGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLALTSDGRVFAWGKNSSGQLGNNST 210
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
IP+ +V+ L T AA G S+A+T G++ +WG SG+LG G S
Sbjct: 211 VDSSIPV--QVQGLPANVTAVAA-GGNHSLALTSDGRIYAWGLNSSGQLGDGTTS----- 262
Query: 221 LRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ TP L+ L G K +AG HS + ++G VY +G + ++ +
Sbjct: 263 ----NSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGTVYAWGGNSYGQLGNGTTTASE 318
Query: 280 RP--------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
P +L S G +Y WG N +G LG G+ ++P RV S
Sbjct: 319 MPVQVTGLANVTAVSAGGSDSLALTSDGYVYAWGLNSSGQLGDGTTSNRNTPVRVFSVLS 378
Query: 320 ESPV---DQVSCGWKHTAAISEG 339
+ Q+S G + A+S G
Sbjct: 379 TGALLTDLQLSDGSSNPIALSPG 401
Score = 111 bits (278), Expect = 5e-22, Method: Composition-based stats.
Identities = 110/356 (30%), Positives = 163/356 (45%), Gaps = 62/356 (17%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
A++ GG+H+L LT V+A G N GQLG G P GL V Q+S G H
Sbjct: 74 AVSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQ-TPTPAQGLP-SVAQVSAGESH 131
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVT 193
S A+T DG ++ WG NS+GQLG G A P+ +V+ L+ T K A G S+A+T
Sbjct: 132 SLALTDDGRVFAWGLNSSGQLGDGTTADSRTPV--QVQGLATDSTIKVVAAGGNHSLALT 189
Query: 194 GGGKVLSWGAGGSGRLGHGQ--ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
G+V +WG SG+LG+ +SSI P ++ L V AAG HS
Sbjct: 190 SDGRVFAWGKNSSGQLGNNSTVDSSI-----------PVQVQGLPA-NVTAVAAGGNHSL 237
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG-----------------------GE 288
+ +GR+Y +G + ++ +++ P L++G G
Sbjct: 238 ALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGT 297
Query: 289 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 347
+Y WG N G LG G+ P +V G + V VS G + A+ S+G + WG
Sbjct: 298 VYAWGGNSYGQLGNGTTTASEMPVQVTG---LANVTAVSAGGSDSLALTSDGYVYAWGL- 353
Query: 348 GSHGTFSEDGHSSGGQLGHGNDVDYIHP----TIVNFGENVKALQVSCGFNHTGAL 399
+S GQLG G + P ++++ G + LQ+S G ++ AL
Sbjct: 354 -----------NSSGQLGDGTTSNRNTPVRVFSVLSTGALLTDLQLSDGSSNPIAL 398
>gi|444915471|ref|ZP_21235603.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713402|gb|ELW54302.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 752
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 157/325 (48%), Gaps = 46/325 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GNG +G+LG G+ SR PV + A+A G H+L L G V+A G N +GQL
Sbjct: 74 GNG-HGQLGDGTTLSRRTPVQVQGLS--GVAAVAAGHGHSLALRYDGTVWAWGNNAYGQL 130
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
G ++ P++++GL VV + G HS A+ DG ++ WG+N++GQLG G + +
Sbjct: 131 GDDTRDNRTV-PVQVTGLSG-VVSVVAGDTHSLAVRSDGSVWAWGRNTSGQLGDGTRDDR 188
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+P+ +V LSG+ + A G S+AV G V +WG SG+LG E++
Sbjct: 189 AVPV--QVTGLSGVVS--VAAGGNHSLAVRSDGSVWAWGNNASGQLGGAPEAAYP----- 239
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF--QEGNHARRP 281
P ++++ GV AAG HS + +G V+ +GD ++ EGN P
Sbjct: 240 ----VPWRVEDVSGVVA--VAAGQYHSLAVRYDGTVWAWGDNLYGQLGDGKLEGNSRWLP 293
Query: 282 SLISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+ G G ++ WG+N G LG GS SP +V G S
Sbjct: 294 KQVPGLGGVVAVSAGFYHSLVVRSDGTVWAWGNNAYGQLGGGSRAHAASPVQVLG---VS 350
Query: 322 PVDQVSCGWKHTAAI-SEGKILTWG 345
V+ G++H+ + S+G + WG
Sbjct: 351 GAVAVAAGYRHSLVVNSDGTLWAWG 375
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 127/457 (27%), Positives = 185/457 (40%), Gaps = 94/457 (20%)
Query: 6 LTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALW--GNGDYGRLGLGSLESRWRPV 63
L +++ KQ LG + + + S + R +W GN YG+LG GS PV
Sbjct: 285 LEGNSRWLPKQVPGLGGVVAVSAGFYHSLVVRSDGTVWAWGNNAYGQLGGGSRAHAASPV 344
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
A+A G H+L + G ++A G N GQ G Y P R+ GL
Sbjct: 345 --QVLGVSGAVAVAAGYRHSLVVNSDGTLWAWGSNLDGQRGDGTLTRYP-TPGRVPGLSG 401
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
VV ++ G H A+ DG ++ WG N++GQLG G + ++ +P +V LSG+ A
Sbjct: 402 -VVSVAAGGGHVLALLSDGTVWAWGDNASGQLGDGTRHSRWVP--RQVPELSGVVAVAAG 458
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHG--QESSILGFLRSTSE--------------- 226
F S+AV G V SWG G+LGHG SS+ +R SE
Sbjct: 459 SSF--SLAVRYDGSVWSWGDNAYGQLGHGSTDASSVPLHVRELSEVVAVAAGSMHALAVR 516
Query: 227 ---------------------------YTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
Y+P + L G+ V +AA F HS + +G V
Sbjct: 517 ADGTVWGWGFNDYGQLGDGFEGISARRYSPVQVPGLSGM-VSVAAD-FGHSLAVRADGTV 574
Query: 260 YIFGDRAVDKMLFQEGNHARR--------PSLIS--------------GGELYTWGSNEN 297
+ +G+ ++ +G RR P ++ G L+ WG+N
Sbjct: 575 WAWGNNTDSEL--GDGTTTRRLVPLRVNAPGTVALLSAGYNYSMAMRADGSLWAWGTNFA 632
Query: 298 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 357
G LG GS P RVQGP S ++ G H+ A+ L W WG F+ +
Sbjct: 633 GQLGDGSTTSRAVPVRVQGPVRAS---TLAAGQSHSMAVGSDGFL-WAWG-----FNFE- 682
Query: 358 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
GQLG G + P V V A+ V+ +
Sbjct: 683 ----GQLGDGTLTHHALPVRVPGMSGVVAVDVTLNLS 715
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 153/328 (46%), Gaps = 47/328 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN G+LG G+ E+ + PV + + A+A G H+L + G V+A G N +GQ
Sbjct: 222 WGNNASGQLG-GAPEAAY-PVPWRVEDVSGVVAVAAGQYHSLAVRYDGTVWAWGDNLYGQ 279
Query: 103 LGISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + G S P ++ GL VV +S G++HS + DG ++ WG N+ GQLG G +A
Sbjct: 280 LGDGKLEGNSRWLPKQVPGLGG-VVAVSAGFYHSLVVRSDGTVWAWGNNAYGQLGGGSRA 338
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P+ +V +SG A G+ S+ V G + +WG+ G+ G G
Sbjct: 339 HAASPV--QVLGVSGAVA--VAAGYRHSLVVNSDGTLWAWGSNLDGQRGDGTL------- 387
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA--- 278
T TP + L GV V +AA G H + +G V+ +GD A L H+
Sbjct: 388 --TRYPTPGRVPGLSGV-VSVAAGGG-HVLALLSDGTVWAWGDNA-SGQLGDGTRHSRWV 442
Query: 279 -RRPSLISG-----------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
R+ +SG G +++WG N G LG GS D P V+
Sbjct: 443 PRQVPELSGVVAVAAGSSFSLAVRYDGSVWSWGDNAYGQLGHGSTDASSVPLHVR---EL 499
Query: 321 SPVDQVSCGWKHTAAI-SEGKILTWGWG 347
S V V+ G H A+ ++G + WGWG
Sbjct: 500 SEVVAVAAGSMHALAVRADGTV--WGWG 525
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 128/285 (44%), Gaps = 48/285 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG GS ++ V E + A+A G H L + G V+ G ND+GQ
Sbjct: 474 WGDNAYGQLGHGSTDAS--SVPLHVRELSEVVAVAAGSMHALAVRADGTVWGWGFNDYGQ 531
Query: 103 LGIS-ENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG E I P+++ GL +V ++ + HS A+ DG ++ WG N++ +LG G
Sbjct: 532 LGDGFEGISARRYSPVQVPGLSG-MVSVAADFGHSLAVRADGTVWAWGNNTDSELGDGTT 590
Query: 161 AAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+++P+ P V LS G+ S+A+ G + +WG +G+LG G
Sbjct: 591 TRRLVPLRVNAPGTVALLSA--------GYNYSMAMRADGSLWAWGTNFAGQLGDGS--- 639
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG----DRAVDKMLF 272
+TS P ++ V+ AAG HS + +G ++ +G + D L
Sbjct: 640 ------TTSRAVP--VRVQGPVRASTLAAGQSHSMAVGSDGFLWAWGFNFEGQLGDGTLT 691
Query: 273 QEGNHARRP----------------SLISGGELYTWGSNENGCLG 301
R P ++ S G L+ WG+N+ G LG
Sbjct: 692 HHALPVRVPGMSGVVAVDVTLNLSLAVRSDGSLWAWGNNDVGQLG 736
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 149/338 (44%), Gaps = 57/338 (16%)
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
H+L + G V+ TG N GQLG + P+++ GL V ++ G+ HS A+ D
Sbjct: 59 HSLAVRPDGTVWTTGGNGHGQLGDGTTLSRR-TPVQVQGLSG-VAAVAAGHGHSLALRYD 116
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G ++ WG N+ GQLG + + +P+ +V LSG+ + A G S+AV G V +W
Sbjct: 117 GTVWAWGNNAYGQLGDDTRDNRTVPV--QVTGLSGVVSVVA--GDTHSLAVRSDGSVWAW 172
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G SG+LG G P + L GV V +AA G HS + +G V+
Sbjct: 173 GRNTSGQLGDGTRD---------DRAVPVQVTGLSGV-VSVAAGGN-HSLAVRSDGSVWA 221
Query: 262 FGDRA--------------------VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLG 301
+G+ A V ++ ++ G ++ WG N G LG
Sbjct: 222 WGNNASGQLGGAPEAAYPVPWRVEDVSGVVAVAAGQYHSLAVRYDGTVWAWGDNLYGQLG 281
Query: 302 IGSI--DVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 358
G + + P++V G V VS G+ H+ + S+G + W G+
Sbjct: 282 DGKLEGNSRWLPKQVPG---LGGVVAVSAGFYHSLVVRSDGTVWAW------------GN 326
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
++ GQLG G+ P V G + A+ V+ G+ H+
Sbjct: 327 NAYGQLGGGSRAHAASPVQV-LGVS-GAVAVAAGYRHS 362
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 8/182 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN LG G+ R P+ +A ++ L+ G +++ + G ++A G N GQ
Sbjct: 577 WGNNTDSELGDGTTTRRLVPLRVNA--PGTVALLSAGYNYSMAMRADGSLWAWGTNFAGQ 634
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ P+R+ G + ++ G HS A+ DG L+ WG N GQLG G
Sbjct: 635 LGDGSTTSRAV-PVRVQGPVRAST-LAAGQSHSMAVGSDGFLWAWGFNFEGQLGDGTLTH 692
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+P+ +V +SG+ L S+AV G + +WG G+LG + + +R
Sbjct: 693 HALPV--RVPGMSGVVAVDVTLNL--SLAVRSDGSLWAWGNNDVGQLGTQPSTYVTTAVR 748
Query: 223 ST 224
S+
Sbjct: 749 SS 750
>gi|77403863|tpg|DAA05713.1| TPA_exp: RPGR ORF15 isoform [Homo sapiens]
Length = 1152
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 180/388 (46%), Gaps = 59/388 (15%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
+ + EN +YT+G + G LG+G+
Sbjct: 255 TVVLTENA-------------------------------VYTFGLGQFGQLGLGTFLFET 283
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
S +V + + +SCG HTA I++ G + T+G G HG LG N
Sbjct: 284 SEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG-DGRHGKLG---------LGLEN 333
Query: 369 DVDYIHPTIV-NFGENVKALQVSCGFNH 395
++ PT+ NF + L V+CG H
Sbjct: 334 FTNHFIPTLCSNFLRFIVKL-VACGGCH 360
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 57/304 (18%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
V +S G HS+ +T + +LYM+G N+ GQLGLG K+A I PT V+ L K AA G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
++ T GG V + G G+LG G ++ F TSE+ K+
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI---------------- 284
K +AG SA + E+GR++++GD + ++ + ++ P +
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202
Query: 285 ----SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 338
+ GELY +G ENG LG+ + L R SE P V QV+CG +HT ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTG 397
+ T+G G GQLG G + + P ++ + +SCG NHT
Sbjct: 261 NAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTA 308
Query: 398 ALLE 401
+ +
Sbjct: 309 LITD 312
>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Callithrix jacchus]
Length = 4774
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG GS RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4003 WGEAEDGKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4062
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4063 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4121 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4177
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4178 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4208
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4209 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4259
Query: 340 KILTWG 345
K + G
Sbjct: 4260 KPTSAG 4265
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 139/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3011 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3070
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3071 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3128
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ +P +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3129 -GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3185
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 3186 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 3219
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3220 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3263
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3897 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3954
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3955 GRLGIGGTESVSSPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4012
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L G+ A G S VT G + +WG G GRLGH
Sbjct: 4013 HGSRSP--CDRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4067
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4068 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4121
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4122 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4181
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4182 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4228
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4229 IQRPRLVAALQGKKVNRVACGSAHTLA 4255
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L +V+ + +G H
Sbjct: 2939 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRH 2998
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 2999 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3056
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3057 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3107
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3108 LTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3167
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3168 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3222
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3223 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3263
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 125/294 (42%), Gaps = 48/294 (16%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 435 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 493
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S+AIT +GELY WG+ + +L G+ A I I K + F Q++A
Sbjct: 494 SAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRFAQTLAFYE 553
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G+V SWG G G+LG G S TP+LI++L+ + V G S +
Sbjct: 554 NGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 604
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELYTW 292
++G+VY +G ++ H R P L+ G E+++W
Sbjct: 605 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 664
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
GSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 665 GSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 707
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 145/353 (41%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ GCVY N +L P + GL
Sbjct: 373 PIQCEGLANLGVTQIACAEKRFLILSRNGCVYTQAYN-----------SDTLAPQLVQGL 421
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 422 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 477
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G RL HG RS
Sbjct: 478 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHG---------RSAMNEIL 525
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
+I L+ K F++ +C G R + F E G++
Sbjct: 526 IMISGLDRQK-------FIYKSC----------GIRFAQTLAFYEN-----------GQV 557
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG G
Sbjct: 558 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 616
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 617 NQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 657
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 111/229 (48%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 450 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 508
Query: 98 NDFGQLGISENIGYSLEPLRISGL-KKEVVQISTG--YHHSSAITVDGELYMWGKNSNGQ 154
++ +L + + + ISGL +++ + S G + + A +G+++ WG G+
Sbjct: 509 GNYXRLDHGRSAMNEIL-IMISGLDRQKFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGK 567
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 568 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 625
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 626 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 665
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 113/258 (43%), Gaps = 52/258 (20%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2893 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2950
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 2951 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYMVKKVA---VHSG---- 2995
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 2996 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3034
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3035 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3081
Query: 375 PTIVNFGENVKALQVSCG 392
P +V + +QV+CG
Sbjct: 3082 PKMVKVLLGHRVIQVACG 3099
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3892 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3949
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ +P L++ ++ V +K A C+
Sbjct: 3950 GYGAGGRLGIGGTESV---------SSPTLLESIQHVFIKKVAVNSGGKHCL-------- 3992
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG GS P ++
Sbjct: 3993 --------------------ALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGVE 4032
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4033 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4079
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 4080 LQGHRVVDIACG 4091
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 560 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 619
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 620 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 671
>gi|408500623|ref|YP_006864542.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465447|gb|AFU70976.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1271
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 163/369 (44%), Gaps = 77/369 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPV----VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
WGN G+LG G+ E++ PV + + ++ HTL L +YA G N
Sbjct: 284 WGNNTRGQLGDGTTENKLTPVKVPKPAGVSNEFTWTQVSARWDHTLALGSNHNLYAWGWN 343
Query: 99 DFGQLGI------SEN-IGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKN 150
+GQLG S+N YS +P+ +S Q+S G +HS A+ D +LY WG N
Sbjct: 344 GYGQLGNTSVPTGSDNPAAYSSKPVLVSTPAGVTFTQLSAGRYHSLALGSDKQLYAWGLN 403
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
++G+LG G + P+P V +G+ Q + G A++ G + +WG G GRLG
Sbjct: 404 TSGRLGDGTDIQRFTPVP--VRQPAGVTFSQFSAGDTSCFAISTNGDLYAWGWNGYGRLG 461
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G + TP LI +G A+AGF + + + V G
Sbjct: 462 DGSNAE--------DRRTPTLISPPDG-----ASAGFTWARVMVRDDHVLAIG------- 501
Query: 271 LFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDV----LHSPERVQGPFSESPVD-- 324
S G LY+WG NE G LGI I+ + P V S +
Sbjct: 502 --------------SDGNLYSWGLNEYGQLGIKDINTDGSYISRPHIVDQSTSSTAQKFT 547
Query: 325 --QVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
Q++ GW+ ++A+ S+G + TWGW ++GGQLG PT+
Sbjct: 548 WTQINAGWRESSALGSDGNLYTWGW------------NNGGQLG--------DPTVPIGT 587
Query: 382 ENVKALQVS 390
+N +A++++
Sbjct: 588 DNSQAMRLT 596
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 143/348 (41%), Gaps = 46/348 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LG G+ R PV + + ++ G +L L G V+A GLN G
Sbjct: 785 WGANKYGQLGDGTATDRLTPVQIPKPTGVNRFTQVSAGTGFSLALDGQGHVWAWGLNSSG 844
Query: 102 QLG---ISEN--IGYSLEPLRI---SGLKKE---VVQISTGYHHSSAITVDGELYMWGKN 150
QLG I+ N YS P+R+ SG+ + IS G H A+ G + WG N
Sbjct: 845 QLGSNAIATNGSSAYSSSPIRVQAPSGMTATNFTLTGISAGITHVLAVDGQGRAWGWGSN 904
Query: 151 SNGQLGLGKKAAKVIPI---PTKVECLSGIFT----KQAALGFEQSVAVTGGGKVLSWGA 203
G+LG+ I P +V G T Q + G S+A G+ WG+
Sbjct: 905 EFGKLGVPASTVATTGITTRPVQVATPQGETTGFHYAQVSAGGSHSLATDTQGRAWGWGS 964
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+G LG+ + ++ G+ + + P G AG HS +D+ GR++ +G
Sbjct: 965 NQNGALGNTSDVALNGYTTTPVQAKPG-TNPSGGFNPAQIIAGSGHSLALDDLGRIWSWG 1023
Query: 264 DRAVDKMLFQEGNHARRPSLIS-------------------------GGELYTWGSNENG 298
+ ++ + PS+++ G ++ WG N +G
Sbjct: 1024 GNSNGELGLGDTTTRTAPSMVAMPANVSTFTQLTGSRVSGNSLALDQNGNIWGWGQNSSG 1083
Query: 299 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 345
LG G L+ P ++ P +V G HT A+ S+G L WG
Sbjct: 1084 MLGTGGTGSLNRPTKMSNPSGIDHFVKVCAGTGHTLAVASDGSTLGWG 1131
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 136/313 (43%), Gaps = 54/313 (17%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-----IST 130
+ G H+L L G +YA G N GQ+G + P++ + Q I+
Sbjct: 209 ITSGATHSLALGSDGSLYAWGDNSSGQVGDNSTT-LRQTPVKTNKPANASDQFTFTTIAA 267
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI---FT-KQAALGF 186
G H S AI DG LY WG N+ GQLG G K+ P+ KV +G+ FT Q + +
Sbjct: 268 GDHSSLAIGSDGNLYAWGNNTRGQLGDGTTENKLTPV--KVPKPAGVSNEFTWTQVSARW 325
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT--PRLIKELEGVKVKIAA 244
+ ++A+ + +WG G G+LG+ +S+ + + Y+ P L+ GV +
Sbjct: 326 DHTLALGSNHNLYAWGWNGYGQLGN---TSVPTGSDNPAAYSSKPVLVSTPAGVTFTQLS 382
Query: 245 AGFLHSACIDENGRVYIFG----DRAVDKMLFQEGN--HARRP----------------S 282
AG HS + + ++Y +G R D Q R+P +
Sbjct: 383 AGRYHSLALGSDKQLYAWGLNTSGRLGDGTDIQRFTPVPVRQPAGVTFSQFSAGDTSCFA 442
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---------KHT 333
+ + G+LY WG N G LG GS + E + P SP D S G+ H
Sbjct: 443 ISTNGDLYAWGWNGYGRLGDGS-----NAEDRRTPTLISPPDGASAGFTWARVMVRDDHV 497
Query: 334 AAI-SEGKILTWG 345
AI S+G + +WG
Sbjct: 498 LAIGSDGNLYSWG 510
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 139/353 (39%), Gaps = 80/353 (22%)
Query: 63 VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI---S 119
+V A ++ G H+L L G VY+ G N +GQLG L P++I +
Sbjct: 753 LVPPAARGIRFSQVSAGDDHSLALGSDGNVYSWGANKYGQLGDGTATDR-LTPVQIPKPT 811
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL------GKKAAKVIPIPTKVEC 173
G+ + Q+S G S A+ G ++ WG NS+GQLG G A PI +V+
Sbjct: 812 GVNR-FTQVSAGTGFSLALDGQGHVWAWGLNSSGQLGSNAIATNGSSAYSSSPI--RVQA 868
Query: 174 LSGIFTKQAAL-----GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
SG+ L G +AV G G+ WG+ G+LG + +T+ T
Sbjct: 869 PSGMTATNFTLTGISAGITHVLAVDGQGRAWGWGSNEFGKLG------VPASTVATTGIT 922
Query: 229 PRLIK------ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
R ++ E G +AG HS D GR
Sbjct: 923 TRPVQVATPQGETTGFHYAQVSAGGSHSLATDTQGRA----------------------- 959
Query: 283 LISGGELYTWGSNENGCLGIGSIDVL--HSPERVQGPFSESP-----VDQVSCGWKHTAA 335
+ WGSN+NG LG S L ++ VQ +P Q+ G H+ A
Sbjct: 960 -------WGWGSNQNGALGNTSDVALNGYTTTPVQAKPGTNPSGGFNPAQIIAGSGHSLA 1012
Query: 336 ISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 387
+ + G+I W WGG +S G+LG G+ P++V NV
Sbjct: 1013 LDDLGRI--WSWGG----------NSNGELGLGDTTTRTAPSMVAMPANVSTF 1053
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 127/316 (40%), Gaps = 68/316 (21%)
Query: 112 SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPT-K 170
+L P G+K QI++G HS A+ DG LY WG NS+GQ+G + P+ T K
Sbjct: 195 TLTPPATRGIK--FSQITSGATHSLALGSDGSLYAWGDNSSGQVGDNSTTLRQTPVKTNK 252
Query: 171 VECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
S FT A G S+A+ G + +WG G+LG G + L TP
Sbjct: 253 PANASDQFTFTTIAAGDHSSLAIGSDGNLYAWGNNTRGQLGDGTTENKL---------TP 303
Query: 230 RLIKELEGVKVKIA----AAGFLHSACIDENGRVYIF--------GDRAVDKMLFQEGNH 277
+ + GV + +A + H+ + N +Y + G+ +V +
Sbjct: 304 VKVPKPAGVSNEFTWTQVSARWDHTLALGSNHNLYAWGWNGYGQLGNTSVPTGSDNPAAY 363
Query: 278 ARRPSLI----------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
+ +P L+ S +LY WG N +G LG G+ +P V+
Sbjct: 364 SSKPVLVSTPAGVTFTQLSAGRYHSLALGSDKQLYAWGLNTSGRLGDGTDIQRFTPVPVR 423
Query: 316 GP----FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV- 370
P FS+ SC A + G + WGW G G+LG G++
Sbjct: 424 QPAGVTFSQFSAGDTSC----FAISTNGDLYAWGWNGY------------GRLGDGSNAE 467
Query: 371 DYIHPTIVNFGENVKA 386
D PT+++ + A
Sbjct: 468 DRRTPTLISPPDGASA 483
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 114/290 (39%), Gaps = 54/290 (18%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENI----GYSLEPLRISGLKKEVV- 126
+L ++ G H L + G + G N+FG+LG+ + G + P++++ + E
Sbjct: 878 TLTGISAGITHVLAVDGQGRAWGWGSNEFGKLGVPASTVATTGITTRPVQVATPQGETTG 937
Query: 127 ----QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA----KVIPIPTK--VECLSG 176
Q+S G HS A G + WG N NG LG A P+ K G
Sbjct: 938 FHYAQVSAGGSHSLATDTQGRAWGWGSNQNGALGNTSDVALNGYTTTPVQAKPGTNPSGG 997
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES-----SILGFLRSTSEYTPRL 231
Q G S+A+ G++ SWG +G LG G + S++ + S +T
Sbjct: 998 FNPAQIIAGSGHSLALDDLGRIWSWGGNSNGELGLGDTTTRTAPSMVAMPANVSTFT--- 1054
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
+L G +V +S +D+NG ++ +G + + RP+
Sbjct: 1055 --QLTGSRVS------GNSLALDQNGNIWGWGQNSSGMLGTGGTGSLNRPTKMSNPSGID 1106
Query: 283 --------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
+ S G WG N G LG + + ++SP V PF
Sbjct: 1107 HFVKVCAGTGHTLAVASDGSTLGWGDNSQGRLGNNATETVYSPVSVLFPF 1156
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 107/260 (41%), Gaps = 48/260 (18%)
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLS-WGAG-GSGRLGHGQESSILGFLRSTSEYTPRL 231
G F Q A F Q VT K+ + W AG G L +++ G +T TP
Sbjct: 146 FDGWFIGQVAYDFNQ--PVTSNLKLSAKWTAGDGHWSLSPAHGTALGG---TTVTLTPPA 200
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGD------------------------RAV 267
+ G+K +G HS + +G +Y +GD A
Sbjct: 201 TR---GIKFSQITSGATHSLALGSDGSLYAWGDNSSGQVGDNSTTLRQTPVKTNKPANAS 257
Query: 268 DKMLFQE---GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF---SES 321
D+ F G+H+ ++ S G LY WG+N G LG G+ + +P +V P +E
Sbjct: 258 DQFTFTTIAAGDHSSL-AIGSDGNLYAWGNNTRGQLGDGTTENKLTPVKVPKPAGVSNEF 316
Query: 322 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY-IHPTIVN 379
QVS W HT A+ S + WGW G + + G++S G N Y P +V+
Sbjct: 317 TWTQVSARWDHTLALGSNHNLYAWGWNG----YGQLGNTS-VPTGSDNPAAYSSKPVLVS 371
Query: 380 FGENVKALQVSCGFNHTGAL 399
V Q+S G H+ AL
Sbjct: 372 TPAGVTFTQLSAGRYHSLAL 391
>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
[Strongylocentrotus purpuratus]
Length = 4064
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 137/307 (44%), Gaps = 48/307 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ RP V + + +ACGGAH+ +T +G +Y G +G+
Sbjct: 3292 WGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGR 3351
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV--DGELYMWGKNSNGQLGLGK 159
LG ++ L P LK V+ ++ G S + + D ++ WG G+LG G
Sbjct: 3352 LGHGDSED-QLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRG- 3409
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P KV+ LS I + G + S+A+T G V +WG G RLGHG + +
Sbjct: 3410 -GSDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLGHGSDDHV-- 3466
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHA 278
PR + L+G K+ A G LH AC D+
Sbjct: 3467 -------RRPRKVAALQGKKIISIATGSLHCVACSDQ----------------------- 3496
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
GE+YTWG N+ G LG G+ + + P R+ + + V+CG HT A S
Sbjct: 3497 --------GEVYTWGDNDEGQLGDGTTNAIQRP-RIVTALQDKKITNVACGSAHTVAWST 3547
Query: 339 GKILTWG 345
K L G
Sbjct: 3548 SKPLHAG 3554
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 186/390 (47%), Gaps = 63/390 (16%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC-GGAHTLFL-TETGCVYATGLND 99
+WG D +LG G S+ + V + F SLK + C GG+ +LF+ T G VYA G
Sbjct: 2210 VWGLNDKDQLG-GPRGSKIKTPVLNEF-LSSLKVVCCAGGSKSLFVVTAEGKVYACGEGT 2267
Query: 100 FGQLGI--SENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+LG+ S+N+ P +++GL + VV+ + +G H+ A+TVDG+++ WG+ +G+
Sbjct: 2268 NGRLGLGSSQNVDI---PKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 2324
Query: 155 LG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
LG L + + P +E L + A G S AVT G++ +WG G GRLGHG
Sbjct: 2325 LGHLSRMNCEK---PRLLEALKTKRIRDIACGSSHSAAVTSSGELYTWGLGEYGRLGHGD 2381
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGD------- 264
ST++ P+L+K L G +V A G + + + G VY +GD
Sbjct: 2382 ---------STTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLG 2432
Query: 265 ----------RAVDKMLFQ-----EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
V+++ Q E +L G+++TWG + LG G+ +
Sbjct: 2433 RGGSEGCSVPHNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGHGTDSHVR 2492
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
P+ +G + V+ G H A+++ G++ WG ++ H GQ G G+
Sbjct: 2493 KPQVAEG-LKGKKIIHVAVGALHCLAVTDTGQVFAWG---------DNDH---GQQGDGS 2539
Query: 369 DVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V E V+ +V+CG +H+ A
Sbjct: 2540 TTVNKKPALVQGLEGVRITRVACGSSHSTA 2569
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 170/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG +E V + SL+ + GG TLF +T G +YATG
Sbjct: 3186 WGHNHRGQLG--GIEGAKVKVPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYATGYGAS 3243
Query: 101 GQLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S + LE ++ +KK V +++G H+ A++V+GE+Y WG+ +G+LG
Sbjct: 3244 GRLGIGGTDSVSTPTLLESIQHVHIKK--VAVNSGGKHALALSVEGEVYSWGEGEDGKLG 3301
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + P +E L G A G S VT G++ +WG G GRLGHG
Sbjct: 3302 HGNRTQ--CDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGRLGHGD--- 3356
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P++ L+G +V A +G + CI ++ V+ +GD K+
Sbjct: 3357 ------SEDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGG 3410
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 3411 SDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLGHGSDDHVRRPR 3470
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+V + ++ G H A S+ G++ TW G + GQLG G
Sbjct: 3471 KVAA-LQGKKIISIATGSLHCVACSDQGEVYTW------------GDNDEGQLGDGTTNA 3517
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P IV ++ K V+CG HT A
Sbjct: 3518 IQRPRIVTALQDKKITNVACGSAHTVA 3544
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 114/252 (45%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT +E L+ + Q G + AVT GK+ +
Sbjct: 3181 GTIYGWGHNHRGQLG-GIEGAKV-KVPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYAT 3238
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G SGRLG G S+ TP L++ ++ V +K A
Sbjct: 3239 GYGASGRLGIGGTDSV---------STPTLLESIQHVHIKKVAVN--------------- 3274
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
G HA +L GE+Y+WG E+G LG G+ P ++ +
Sbjct: 3275 -----------SGGKHAL--ALSVEGEVYSWGEGEDGKLGHGNRTQCDRPRVIESLRGKE 3321
Query: 322 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
+D ++CG H+A + S G++ TWG G G+LGHG+ D + P + +
Sbjct: 3322 VID-IACGGAHSACVTSSGELYTWGKG------------RYGRLGHGDSEDQLRPKMADA 3368
Query: 381 GENVKALQVSCG 392
+ + + V+CG
Sbjct: 3369 LKGYRVIDVACG 3380
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 133/348 (38%), Gaps = 105/348 (30%)
Query: 134 HSSAITVDGELYMWGKNSNGQLG------------------------------------- 156
H + + ++++WG N QLG
Sbjct: 2198 HGGSREIQTKVFVWGLNDKDQLGGPRGSKIKTPVLNEFLSSLKVVCCAGGSKSLFVVTAE 2257
Query: 157 -------------LGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSW 201
LG +++ + IP +V LS K+ A+ G ++A+T GKV SW
Sbjct: 2258 GKVYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSW 2317
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G G+LGH L + PRL++ L+ +++ A G HSA + +G +Y
Sbjct: 2318 GEGDDGKLGH---------LSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSSGELYT 2368
Query: 262 FGDRAVDKMLFQEGNHARRPSLISG------------------------GELYTWGSNEN 297
+G ++ + RP L+ G +Y+WG +
Sbjct: 2369 WGLGEYGRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDF 2428
Query: 298 GCLGIGSID---VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTF 353
G LG G + V H+ ER+ G V Q+ CG + + A+++ G++ TWG G
Sbjct: 2429 GKLGRGGSEGCSVPHNVERLNG----QGVIQIECGAQFSLALTKAGQVWTWGKGDYF--- 2481
Query: 354 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHG D P + + K + V+ G H A+ +
Sbjct: 2482 ---------RLGHGTDSHVRKPQVAEGLKGKKIIHVAVGALHCLAVTD 2520
>gi|348530942|ref|XP_003452969.1| PREDICTED: hypothetical protein LOC100696645 [Oreochromis
niloticus]
Length = 1384
Score = 116 bits (290), Expect = 2e-23, Method: Composition-based stats.
Identities = 98/341 (28%), Positives = 155/341 (45%), Gaps = 61/341 (17%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
+ ETG ++ FG+ + N+ P + +S G HS+ IT +G L
Sbjct: 9 IPETGAIFT-----FGRTSFANNV-----PSKFWLKNDHPKHMSCGGEHSAVITENGRLL 58
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
M+G N+ GQLGL K + PT V+ L K AA G + ++ T G V S G+
Sbjct: 59 MFGGNTWGQLGLRIKPSA--RKPTSVKALKSEKVKLAACGRDHTIVCTFHGSVYSAGSNQ 116
Query: 206 SGRLG--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LG H +S+ LR ++ P +K+ +AG SA + E+GR++++G
Sbjct: 117 DGQLGLGHCDKSTYFHLLRPFCDWAP----------IKMLSAGCNTSAALTEDGRLFMWG 166
Query: 264 DRAVDKMLFQEGNHARRPSLISGGE--------------------LYTWGSNENGCLGIG 303
D +V ++ F + A P + GE LYT+G + NG LG+
Sbjct: 167 DNSVGQIAFGDEGFAAEPREVHVGEAVIWVSCGYKHSAFVTVYGRLYTFGESANGRLGLQ 226
Query: 304 SIDVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSG 361
+ + P++VQG V +V CG +HT ++E + T+G G
Sbjct: 227 KEQLANHRVPQQVQGVLGH--VTRVCCGGEHTVVLTEKNVYTFGRG------------QY 272
Query: 362 GQLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNHTGALLE 401
GQLGHG + +H P + N K ++CG NHT + +
Sbjct: 273 GQLGHGTFLFEVHLPKALQHFCNSKVRHIACGENHTAVVTD 313
Score = 106 bits (264), Expect = 3e-20, Method: Composition-based stats.
Identities = 100/347 (28%), Positives = 151/347 (43%), Gaps = 49/347 (14%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GY 132
K ++CGG H+ +TE G + G N +GQLG+ + +P + LK E V+++ G
Sbjct: 39 KHMSCGGEHSAVITENGRLLMFGGNTWGQLGLRIKPS-ARKPTSVKALKSEKVKLAACGR 97
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
H+ T G +Y G N +GQLGLG + C K + G S A+
Sbjct: 98 DHTIVCTFHGSVYSAGSNQDGQLGLGHCDKSTYFHLLRPFC-DWAPIKMLSAGCNTSAAL 156
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G++ WG G++ G E GF PR + G V + G+ HSA
Sbjct: 157 TEDGRLFMWGDNSVGQIAFGDE----GFAAE-----PREVH--VGEAVIWVSCGYKHSAF 205
Query: 253 IDENGRVYIFGDRAVDKMLFQE---GNHARRPSLIS-----------GGE---------L 289
+ GR+Y FG+ A ++ Q+ NH R P + GGE +
Sbjct: 206 VTVYGRLYTFGESANGRLGLQKEQLANH-RVPQQVQGVLGHVTRVCCGGEHTVVLTEKNV 264
Query: 290 YTWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGG 348
YT+G + G LG G+ + +H P+ +Q F S V ++CG HTA +++ +L G
Sbjct: 265 YTFGRGQYGQLGHGTFLFEVHLPKALQH-FCNSKVRHIACGENHTAVVTDSGLLYTFGDG 323
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
HG LG N ++ PT+ VSCG +H
Sbjct: 324 RHGKLG---------LGEENFINQFSPTLCTRFLQYAVQSVSCGGHH 361
Score = 44.7 bits (104), Expect = 0.094, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+G G YG+LG G+ L P F ++ +ACG HT +T++G +Y G G
Sbjct: 267 FGRGQYGQLGHGTFLFEVHLPKALQHFCNSKVRHIACGENHTAVVTDSGLLYTFGDGRHG 326
Query: 102 QLGI-SENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
+LG+ EN P + + VQ +S G HH
Sbjct: 327 KLGLGEENFINQFSPTLCTRFLQYAVQSVSCGGHH 361
Score = 40.4 bits (93), Expect = 1.4, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +C+ F ++++++++CGG H L L
Sbjct: 320 FGDGRHGKLGLGEENFINQFSPTLCTRFLQYAVQSVSCGGHHMLVL 365
>gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus]
Length = 1104
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 171/370 (46%), Gaps = 72/370 (19%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQ-IS 129
++ +ACGG H +T+ G ++ G G+L G+ ++ L+P + L ++ +S
Sbjct: 310 VQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDV---LQPKLVDALGNTNIELVS 366
Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
G +H+ A+T+ G+LY WG + G LG G + + IP K+ L GI A G
Sbjct: 367 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHW--IPKKINGPLEGIHVSSIACGP 424
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+ VT G++ ++G G G LGHG S+ PR ++ L+G++ AA G
Sbjct: 425 WHTAVVTSAGQLFTFGDGTFGVLGHGDRGSVT---------MPREVESLKGLRTVRAACG 475
Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGN------------------ 276
H+A + E +G+++ +GD DK G+
Sbjct: 476 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKGRLGHGDKETKLVPTCVAALVDPNF 533
Query: 277 ------HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 330
H+ +L + G +YT GS G LG D P RV+G S+S V++++CG
Sbjct: 534 CRVSCGHSMTVALTTSGHVYTMGSPVYGQLGNPHADG-KVPVRVEGKLSKSFVEEIACGA 592
Query: 331 KHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 389
H A + S ++ TWG G + G+LGHG+ D PT+V ++ + +
Sbjct: 593 YHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRNSPTLVEALKDKQVKSI 640
Query: 390 SCGFNHTGAL 399
+CG N T A+
Sbjct: 641 ACGTNFTAAI 650
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G E++ P +A + ++CG + T+ LT +G VY G +GQ
Sbjct: 503 WGDGDKGRLGHGDKETKLVPTCVAALVDPNFCRVSCGHSMTVALTTSGHVYTMGSPVYGQ 562
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG G P+R+ G K V +I+ G +H + +T E+Y WGK +NG+LG G
Sbjct: 563 LGNPHADGKV--PVRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDT 620
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ PT VE L K A G + A+
Sbjct: 621 DDRN--SPTLVEALKDKQVKSIACGTNFTAAI 650
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 109/271 (40%), Gaps = 60/271 (22%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G + VT G++ +WG GRLGHG +S +L
Sbjct: 298 LPKALESAVVLDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVL-------- 349
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+L+ L +++ + G H+ + +G +Y +GD + L GN P I
Sbjct: 350 -QPKLVDALGNTNIELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKI 408
Query: 285 SG-----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+G G+L+T+G G LG G + P V+
Sbjct: 409 NGPLEGIHVSSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVESLKGLR 468
Query: 322 PVDQVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
V + +CG HTAA+ E GK+ TWG G G+LGHG+
Sbjct: 469 TV-RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDK------------GRLGHGD 515
Query: 369 DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ PT V + +VSCG + T AL
Sbjct: 516 KETKLVPTCVAALVDPNFCRVSCGHSMTVAL 546
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 107/277 (38%), Gaps = 76/277 (27%)
Query: 43 WGNGDY--GRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+G Y G LG G+ S W P + E + ++ACG HT +T G ++ G
Sbjct: 384 WGDGTYNFGLLGHGNEVSHWIPKKINGPLEGIHVSSIACGPWHTAVVTSAGQLFTFGDGT 443
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAIT------------VDGELYM 146
FG LG + G P + LK V+ + G H++A+ G+L+
Sbjct: 444 FGVLGHGDR-GSVTMPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 502
Query: 147 WGKNSNGQLGLGKKAAKVIP---------------------------------------- 166
WG G+LG G K K++P
Sbjct: 503 WGDGDKGRLGHGDKETKLVPTCVAALVDPNFCRVSCGHSMTVALTTSGHVYTMGSPVYGQ 562
Query: 167 ---------IPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+P +VE LS F ++ A G +T +V +WG G +GRLGHG
Sbjct: 563 LGNPHADGKVPVRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGD--- 619
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
+ +P L++ L+ +VK A G +A I
Sbjct: 620 ------TDDRNSPTLVEALKDKQVKSIACGTNFTAAI 650
>gi|393912010|gb|EJD76548.1| hect domain and RLD 4, variant [Loa loa]
Length = 1017
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 158/331 (47%), Gaps = 40/331 (12%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLEPLRISGLKKEVVQI 128
++KA+A G HTLFL G V++ G N G+LG + E Y++ P+ IS + ++QI
Sbjct: 48 TVKAVASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEG-SYTIYPVHISNAVR-IIQI 105
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G HS A++ DG L+ WG NS+GQL + + P +V L T Q A G
Sbjct: 106 SAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDIL-ISDTPKRVPSLPE--TVQVACGASH 162
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG---VKVKIAAA 245
+V++ GGG+V WG GR+ H L + I ++ + + A+
Sbjct: 163 TVSLNGGGRVFIWGQQSDGRIRHSPAEVEL--------FVSVPIIQISAGNLFTMALTAS 214
Query: 246 GFLHSACIDENGRVYIFGDRAV---------DKMLFQEGNHARRPSLISGGELYTWGSNE 296
G L + +E G++ F +R V + ++ E + +L G +++ GS+
Sbjct: 215 GTLFAWGRNEEGQLGNFTNRDVINPREVPNINSVVVVECGDSHSIALTHEGRVFSCGSDS 274
Query: 297 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 356
G LG G + R S V +++CG HT ++ GK+ T+G
Sbjct: 275 FGQLGCGQPSRSQNCMRGITEMLGSHVTRIACGRCHTIVVANGKMHTFGL---------- 324
Query: 357 GHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 387
+S GQLGHGN + I P +++ ENV ++
Sbjct: 325 --NSNGQLGHGNTRNQITPRMIDSVENVASV 353
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 122/293 (41%), Gaps = 66/293 (22%)
Query: 140 VDGELYMWGKNSNGQLGLGKKAA----KVIPIPTKVECLS----GIFTKQAALGFEQSVA 191
V +LY++G S+GQL +A +++ P V G+ K A G + ++
Sbjct: 2 VRRQLYVFGCASDGQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLF 61
Query: 192 VTGGGKVLSWGAGGSGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+ GKV S G+ +G LG G +E S YT + V++ +AG H
Sbjct: 62 LANDGKVWSCGSNYNGELGRGGVKEGS----------YTIYPVHISNAVRIIQISAGRSH 111
Query: 250 SACIDENGRVYIFGDR-----AVDKMLFQEGNHARRPSLIS----------------GGE 288
S + ++GR++ +G A+ + R PSL GG
Sbjct: 112 SMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQVACGASHTVSLNGGGR 171
Query: 289 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 347
++ WG +G + HSP V+ F P+ Q+S G T A++ G + W
Sbjct: 172 VFIWGQQSDG-------RIRHSPAEVEL-FVSVPIIQISAGNLFTMALTASGTLFAW--- 220
Query: 348 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA-LQVSCGFNHTGAL 399
G + GQLG+ + D I+P V N+ + + V CG +H+ AL
Sbjct: 221 ---------GRNEEGQLGNFTNRDVINPREV---PNINSVVVVECGDSHSIAL 261
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 13/142 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG + P +S+ + CG +H++ LT G V++ G + FGQ
Sbjct: 220 WGRNEEGQLGNFTNRDVINPREVPNI--NSVVVVECGDSHSIALTHEGRVFSCGSDSFGQ 277
Query: 103 LGI-----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
LG S+N + + L V +I+ G H + + +G+++ +G NSNGQLG
Sbjct: 278 LGCGQPSRSQNCMRGITEM----LGSHVTRIACGRCH-TIVVANGKMHTFGLNSNGQLGH 332
Query: 158 GKKAAKVIP-IPTKVECLSGIF 178
G ++ P + VE ++ +F
Sbjct: 333 GNTRNQITPRMIDSVENVASVF 354
>gi|354485549|ref|XP_003504946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
[Cricetulus griseus]
Length = 887
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 126/244 (51%), Gaps = 8/244 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG ++ +P A + ++CG H++ + G V+A G GQL
Sbjct: 46 GDNSLGQLGQKREQNTEQPEPIQALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQL 105
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E +L P+RI L +++Q+S G++HS A++ DG+++ WGKNS GQLGLG +++
Sbjct: 106 GIGEFKEINLMPMRIKTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSS 165
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P KV L GI Q A G S A++ G WG+ G+L E+S + +
Sbjct: 166 SQAS-PQKVTSLEGIPLAQVAAGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISK 224
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P I L+ + V + G+ H+A + ++G+V+ FGD + ++ R P
Sbjct: 225 ------PHSIDALKNLGVIYISCGYEHTAVLTKDGQVFTFGDNSSGQLQNNPRGKRRGPQ 278
Query: 283 LISG 286
L+ G
Sbjct: 279 LVEG 282
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 40/299 (13%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQISTGYHHS 135
A G H+L L VY+ G N GQLG E EP++ G ++ +S G HS
Sbjct: 27 ASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEPIQALG-TLDIDLVSCGKEHS 85
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ G ++ WG S GQLG+G + ++ +P +++ L GI Q + G S+A++
Sbjct: 86 IAVCHKGRVFAWGAGSEGQLGIG-EFKEINLMPMRIKTLGGIKIIQVSCGHYHSLALSED 144
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID- 254
G+V SWG G+LG G +SS S+ +P+ + LEG+ + AAG HS +
Sbjct: 145 GQVFSWGKNSQGQLGLGMQSS--------SQASPQKVTSLEGIPLAQVAAGGSHSFALSL 196
Query: 255 -------------------ENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISGGELY 290
EN V I ++D + ++ + L G+++
Sbjct: 197 TGTSYGWGSNSVGQLALSGENSTVQISKPHSIDALKNLGVIYISCGYEHTAVLTKDGQVF 256
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTWGWG 347
T+G N +G L P+ V+G + V ++ CG HT A + G++++ G G
Sbjct: 257 TFGDNSSGQLQNNPRGKRRGPQLVEG--IKGQVSKIECGSYHTIAYVYTTGQVVSLGHG 313
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 130/291 (44%), Gaps = 53/291 (18%)
Query: 112 SLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
S +P R++G E++Q ++G HS + + +Y G NS GQLG ++ P P
Sbjct: 9 SRQPRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEP-- 66
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
++ L + + G E S+AV G+V +WGAG G+LG G+ I P
Sbjct: 67 IQALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEI--------NLMPM 118
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
IK L G+K+ + G HS + E+G+V +
Sbjct: 119 RIKTLGGIKIIQVSCGHYHSLALSEDGQV------------------------------F 148
Query: 291 TWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG-G 348
+WG N G LG+G SP++V P+ QV+ G H+ A+S ++GWG
Sbjct: 149 SWGKNSQGQLGLGMQSSSQASPQKVTS-LEGIPLAQVAAGGSHSFALSLTGT-SYGWGSN 206
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
S G + G +S Q+ + +D + +N+ + +SCG+ HT L
Sbjct: 207 SVGQLALSGENSTVQISKPHSIDAL--------KNLGVIYISCGYEHTAVL 249
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 14/230 (6%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E P+ + ++CG H+L L+E G V++
Sbjct: 93 RVFA--WGAGSEGQLGIGEFKEINLMPMRIKTLGGIKIIQVSCGHYHSLALSEDGQVFSW 150
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ P +++ L+ + Q++ G HS A+++ G Y WG NS GQ
Sbjct: 151 GKNSQGQLGLGMQSSSQASPQKVTSLEGIPLAQVAAGGSHSFALSLTGTSYGWGSNSVGQ 210
Query: 155 LGL-GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L L G+ + I P ++ L + + G+E + +T G+V ++G SG+L +
Sbjct: 211 LALSGENSTVQISKPHSIDALKNLGVIYISCGYEHTAVLTKDGQVFTFGDNSSGQLQNNP 270
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G P+L++ ++G KI + A + G+V G
Sbjct: 271 RGKRRG---------PQLVEGIKGQVSKIECGSYHTIAYVYTTGQVVSLG 311
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGE 288
PR + +G+++ AA+G HS + N RVY GD ++ ++ + + +P I
Sbjct: 12 PRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEPIQA-- 69
Query: 289 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 347
+G++D+ D VSCG +H+ A+ +G++ WG G
Sbjct: 70 -------------LGTLDI----------------DLVSCGKEHSIAVCHKGRVFAWGAG 100
Query: 348 GSHGTFSEDGHSSGGQLGHG--NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
S GQLG G +++ + I G +K +QVSCG H+ AL E
Sbjct: 101 ------------SEGQLGIGEFKEINLMPMRIKTLG-GIKIIQVSCGHYHSLALSE 143
>gi|393912009|gb|EJD76547.1| hect domain and RLD 4 [Loa loa]
Length = 1043
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 158/331 (47%), Gaps = 40/331 (12%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLEPLRISGLKKEVVQI 128
++KA+A G HTLFL G V++ G N G+LG + E Y++ P+ IS + ++QI
Sbjct: 48 TVKAVASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEG-SYTIYPVHISNAVR-IIQI 105
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G HS A++ DG L+ WG NS+GQL + + P +V L T Q A G
Sbjct: 106 SAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDIL-ISDTPKRVPSLPE--TVQVACGASH 162
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG---VKVKIAAA 245
+V++ GGG+V WG GR+ H L + I ++ + + A+
Sbjct: 163 TVSLNGGGRVFIWGQQSDGRIRHSPAEVEL--------FVSVPIIQISAGNLFTMALTAS 214
Query: 246 GFLHSACIDENGRVYIFGDRAV---------DKMLFQEGNHARRPSLISGGELYTWGSNE 296
G L + +E G++ F +R V + ++ E + +L G +++ GS+
Sbjct: 215 GTLFAWGRNEEGQLGNFTNRDVINPREVPNINSVVVVECGDSHSIALTHEGRVFSCGSDS 274
Query: 297 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 356
G LG G + R S V +++CG HT ++ GK+ T+G
Sbjct: 275 FGQLGCGQPSRSQNCMRGITEMLGSHVTRIACGRCHTIVVANGKMHTFGL---------- 324
Query: 357 GHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 387
+S GQLGHGN + I P +++ ENV ++
Sbjct: 325 --NSNGQLGHGNTRNQITPRMIDSVENVASV 353
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 122/293 (41%), Gaps = 66/293 (22%)
Query: 140 VDGELYMWGKNSNGQLGLGKKAA----KVIPIPTKVECLS----GIFTKQAALGFEQSVA 191
V +LY++G S+GQL +A +++ P V G+ K A G + ++
Sbjct: 2 VRRQLYVFGCASDGQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLF 61
Query: 192 VTGGGKVLSWGAGGSGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+ GKV S G+ +G LG G +E S YT + V++ +AG H
Sbjct: 62 LANDGKVWSCGSNYNGELGRGGVKEGS----------YTIYPVHISNAVRIIQISAGRSH 111
Query: 250 SACIDENGRVYIFGDR-----AVDKMLFQEGNHARRPSLIS----------------GGE 288
S + ++GR++ +G A+ + R PSL GG
Sbjct: 112 SMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQVACGASHTVSLNGGGR 171
Query: 289 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 347
++ WG +G + HSP V+ F P+ Q+S G T A++ G + W
Sbjct: 172 VFIWGQQSDG-------RIRHSPAEVE-LFVSVPIIQISAGNLFTMALTASGTLFAW--- 220
Query: 348 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA-LQVSCGFNHTGAL 399
G + GQLG+ + D I+P V N+ + + V CG +H+ AL
Sbjct: 221 ---------GRNEEGQLGNFTNRDVINPREV---PNINSVVVVECGDSHSIAL 261
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 18/156 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG + P +S+ + CG +H++ LT G V++ G + FGQ
Sbjct: 220 WGRNEEGQLGNFTNRDVINPREVPNI--NSVVVVECGDSHSIALTHEGRVFSCGSDSFGQ 277
Query: 103 LGI-----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
LG S+N + + L V +I+ G H + + +G+++ +G NSNGQLG
Sbjct: 278 LGCGQPSRSQNCMRGITEM----LGSHVTRIACGRCH-TIVVANGKMHTFGLNSNGQLGH 332
Query: 158 GKKAAKVIP-IPTKVECLSGIFTKQAALGFEQSVAV 192
G ++ P + VE ++ +F G++QS +
Sbjct: 333 GNTRNQITPRMIDSVENVASVFA-----GWDQSFCL 363
>gi|255544003|ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223548075|gb|EEF49567.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1096
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 174/368 (47%), Gaps = 68/368 (18%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQ-IS 129
++ +ACG H +T+ G V++ G G+L G+ ++ L P + GLK V+ ++
Sbjct: 307 VQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDV---LHPKLVDGLKNTNVELVA 363
Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
G +HS A+T+ G+LY WG +S+ G LG +A+ +P K+ L GI + G
Sbjct: 364 CGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNW--VPKKLNGPLEGIHVAAVSCGP 421
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+ VT G++ ++G G G LGHG S+ TPR ++ L+G++ AA G
Sbjct: 422 WHTAVVTSSGQLFTFGDGTFGVLGHGDRRSV---------STPREVESLKGLRTVRAACG 472
Query: 247 FLHSACIDE------------NGRVYIFGD-------------RAVDKML--FQEGN--- 276
H+A + E +G+++ +GD R V + E N
Sbjct: 473 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLVPTCVAALVEPNFCQ 532
Query: 277 ----HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 332
H+ +L + G +YT GS G LG D P RV+G S++ V+++ CG H
Sbjct: 533 VACGHSMTVALTTTGHVYTMGSPVYGQLGNPQADG-KLPVRVEGKLSKNFVEELDCGAYH 591
Query: 333 TAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 391
A + S ++ TWG G + G+LGHG+ D PTIV ++ + V C
Sbjct: 592 VAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRSSPTIVEALKDKQVKSVVC 639
Query: 392 GFNHTGAL 399
G + T A+
Sbjct: 640 GTSFTAAI 647
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G ESR P +A + + +ACG + T+ LT TG VY G +GQ
Sbjct: 500 WGDGDKGRLGHGDKESRLVPTCVAALVEPNFCQVACGHSMTVALTTTGHVYTMGSPVYGQ 559
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + G P+R+ G K V ++ G +H + +T E+Y WGK +NG+LG G
Sbjct: 560 LGNPQADGKL--PVRVEGKLSKNFVEELDCGAYHVAVLTSRTEVYTWGKGANGRLGHGDT 617
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ PT VE L K G + A+
Sbjct: 618 DDRS--SPTIVEALKDKQVKSVVCGTSFTAAI 647
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 102/240 (42%), Gaps = 54/240 (22%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G + VT G+V SWG GRLGHG +S +L
Sbjct: 295 VPKALESAVLLDVQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLH------- 347
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
P+L+ L+ V++ A G HS +
Sbjct: 348 --PKLVDGLKNTNVELVACGEYHSCAV------------------------------TLS 375
Query: 287 GELYTWGSNENGC--LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILT 343
G+LYTWG + + C LG + P+++ GP V VSCG HTA + S G++ T
Sbjct: 376 GDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPLEGIHVAAVSCGPWHTAVVTSSGQLFT 435
Query: 344 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
+G GTF G LGHG+ P V + ++ ++ +CG HT A++E +
Sbjct: 436 FG----DGTF--------GVLGHGDRRSVSTPREVESLKGLRTVRAACGVWHTAAVVEVM 483
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 37/230 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL-----ACGGAHTLFLTET-------- 89
+G+G +G LG G S V + E SLK L ACG HT + E
Sbjct: 436 FGDGTFGVLGHGDRRS-----VSTPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 490
Query: 90 ----GCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGEL 144
G ++ G D G+LG + L P ++ L + Q++ G+ + A+T G +
Sbjct: 491 NCSSGKLFTWGDGDKGRLGHGDKESR-LVPTCVAALVEPNFCQVACGHSMTVALTTTGHV 549
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
Y G GQLG + K +P +VE LS F ++ G +T +V +WG
Sbjct: 550 YTMGSPVYGQLGNPQADGK---LPVRVEGKLSKNFVEELDCGAYHVAVLTSRTEVYTWGK 606
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G +GRLGHG + +P +++ L+ +VK G +A I
Sbjct: 607 GANGRLGHGD---------TDDRSSPTIVEALKDKQVKSVVCGTSFTAAI 647
>gi|113205520|ref|NP_001037872.1| retinitis pigmentosa GTPase regulator [Xenopus (Silurana)
tropicalis]
gi|77808103|gb|ABB03733.1| RPGR 1-19 isoform [Xenopus (Silurana) tropicalis]
Length = 729
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 150/335 (44%), Gaps = 71/335 (21%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
++CG HT+ +T G +Y G N++GQLG+ S +P + LK E VV + G HH
Sbjct: 42 ISCGDEHTVLVTGNGKLYVFGSNNWGQLGVEAGSAIS-KPTCVKALKSEKVVLAACGRHH 100
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ T G+LY G NS GQLGLG A + T + +S FT KQ + G S
Sbjct: 101 TLVYTEQGKLYSSGGNSEGQLGLGDTAGR-----TSFQEIS-FFTAQYKIKQLSAGSNMS 154
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T GK+ WG G+ LG + T TP+ + G + + G+ H
Sbjct: 155 AALTVDGKLFMWGDNSEGQ---------LGLEKGTIYCTPQKVD--TGKPIAWISCGYYH 203
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGI--GSIDV 307
SA + ++G ELYT+G ENG LG+ I
Sbjct: 204 SAFVTQDG------------------------------ELYTFGEPENGKLGLPPDKIKK 233
Query: 308 LHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
P+RV G + V VSCG +HT A++E ++ T+G G GQLGHG
Sbjct: 234 HKKPQRVLGLSGK--VTMVSCGGEHTIAVTEKEVYTFGLG------------QFGQLGHG 279
Query: 368 NDVDYIH-PTIVNFGENVKALQVSCGFNHTGALLE 401
+ H P V+ K V+CG NHT + E
Sbjct: 280 TFIFETHIPKAVDALTKKKIRYVTCGENHTAIITE 314
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 147/312 (47%), Gaps = 46/312 (14%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LG+ + + +P A + + ACG HTL TE G +Y++G N G
Sbjct: 60 VFGSNNWGQLGVEAGSAISKPTCVKALKSEKVVLAACGRHHTLVYTEQGKLYSSGGNSEG 119
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + G S + + + ++ Q+S G + S+A+TVDG+L+MWG NS GQLGL K
Sbjct: 120 QLGLGDTAGRTSFQEISFFTAQYKIKQLSAGSNMSAALTVDGKLFMWGDNSEGQLGLEK- 178
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P KV+ +G + G+ S VT G++ ++G +G+LG L
Sbjct: 179 -GTIYCTPQKVD--TGKPIAWISCGYYHSAFVTQDGELYTFGEPENGKLG-------LPP 228
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ P+ + L G KV + + G H+ + E VY FG
Sbjct: 229 DKIKKHKKPQRVLGLSG-KVTMVSCGGEHTIAVTEK-EVYTFG----------------- 269
Query: 281 PSLISGGELYTWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
L +G LG G+ I H P+ V ++ + V+CG HTA I+E
Sbjct: 270 --------LGQFGQ-----LGHGTFIFETHIPKAVDA-LTKKKIRYVTCGENHTAIITEK 315
Query: 340 KILTWGWGGSHG 351
+L G HG
Sbjct: 316 GLLYTFGDGRHG 327
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P++CS F K +++++ACGG H L
Sbjct: 321 FGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCHMLVF 366
>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
Length = 1319
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 868 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 927
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 928 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 985
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 986 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 1042
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 1043 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 1073
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 1074 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 1124
Query: 340 KILTWG 345
K + G
Sbjct: 1125 KPASAG 1130
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 762 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 819
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 820 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 877
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 878 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 932
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 933 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 986
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 987 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 1046
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 1047 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 1093
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 1094 IQRPRLVAALQGKKVNRVACGSAHTLA 1120
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 10/193 (5%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P + A + ++ +ACG +H+ LT +G +Y GL ++G+LG +N L+P +
Sbjct: 5 KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNT-TQLKPKMVKV 63
Query: 121 LK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
L V+Q++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 64 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQ 121
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
Q G + S+A+T G V +W G HGQ+ G +T P L++ LEG
Sbjct: 122 GVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQ----GNGTTTVNRKPTLVQGLEG 177
Query: 238 VKVKIAAAGFLHS 250
K+ A G HS
Sbjct: 178 QKITRVACGSSHS 190
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 100/233 (42%), Gaps = 40/233 (17%)
Query: 114 EPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
+P I LK K + I+ G HS+A+T GELY WG G+LG G ++ P KV
Sbjct: 5 KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV- 63
Query: 173 CLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
L G Q A G Q++A+T G V SWG G G+LG G S P+
Sbjct: 64 -LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---------SEGCNIPQ 113
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
I+ L G V G S + ++G V+ + ++Y
Sbjct: 114 NIERLNGQGVCQIECGAQFSLALTKSGVVWTW-------------------------QVY 148
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 343
WG N++G G G+ V P VQG + +V+CG H+ A + + T
Sbjct: 149 AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTVDVAT 200
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG G ++ +P + H + +ACG A TL LT+ G V++ G DF
Sbjct: 39 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 98
Query: 101 GQLGI--SE--NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG-----ELYMWGKNS 151
G+LG SE NI ++E L G V QI G S A+T G ++Y WG N
Sbjct: 99 GKLGRGGSEGCNIPQNIERLNGQG----VCQIECGAQFSLALTKSGVVWTWQVYAWGDND 154
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+GQ G G V PT V+ L G + A G SVA T
Sbjct: 155 HGQQGNG--TTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 194
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 757 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 814
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 815 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 857
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 858 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 897
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 898 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 944
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 945 LQGHRVVDIACG 956
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 101/235 (42%), Gaps = 52/235 (22%)
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P +E L + A G S A+T G++ +WG G GRLGHG +T++
Sbjct: 6 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD---------NTTQL 56
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
P+++K L G +V A G A+ +L G
Sbjct: 57 KPKMVKVLLGHRVIQVACG----------------------------SRDAQTLALTDEG 88
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW-- 344
+++WG + G LG G + + P+ ++ + V Q+ CG + + A+++ G + TW
Sbjct: 89 LVFSWGDGDFGKLGRGGSEGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWQV 147
Query: 345 -GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
WG ++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 148 YAWG-------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 192
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 68/180 (37%), Gaps = 58/180 (32%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGE 288
PRLI+ L+ +++ A G HSA +L S GE
Sbjct: 6 PRLIEALKTKRIRDIACGSSHSA------------------------------ALTSSGE 35
Query: 289 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWG 345
LYTWG E G LG G P+ V+ V QV+CG + A EG + +WG
Sbjct: 36 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG 94
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 399
G F G+LG G N +N++ L Q+ CG + AL
Sbjct: 95 ----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 136
>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
magnipapillata]
Length = 2284
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 176/405 (43%), Gaps = 54/405 (13%)
Query: 26 ICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF 85
+C W +ST ++ +WG D +LG P +C K +A G T F
Sbjct: 546 LCTLWENSTNKQVDVFMWGLNDKDQLGGLKGSKVKSPTLCDHLSSLQCKFIAGGSKSTFF 605
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV---VQISTGYHHSSAITVDG 142
+T G +Y+ G + FG+LGI + G P ++GL + + V + +G +H A+T DG
Sbjct: 606 ITNKGKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDG 665
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+ WG NGQLG G + P +E G + G S A+ + +WG
Sbjct: 666 LAFSWGDGENGQLGHGNLMS--CSKPHLIEAFVGKIVTDISCGSAHSAAIVENKYLYTWG 723
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVY 260
G GRLGHG E +IL P+ + G V + G + CI ++ +V+
Sbjct: 724 LGDFGRLGHGDEETIL---------QPKFVTHFLGYNVVQVSCGSRDAQTVCITDDDKVW 774
Query: 261 IFGDRAVDK---------MLFQEGNHAR-------------RPSLISGGELYTWGSNENG 298
+GD K ++ E R +L G ++TWG +
Sbjct: 775 SWGDGDFGKLGRGGSERCLIPVEVEQLRGLQICKILCGAQFTVALTKTGTVWTWGKGDFY 834
Query: 299 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDG 357
LG G+ + P+ V+G + +D ++ G H A++ +G++ +WG ++
Sbjct: 835 RLGHGTDIHVRQPKLVEGLRGKHVID-IAVGALHCLAVTQDGEVFSWG---------DND 884
Query: 358 HSSGGQLGHG-NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
H GQLG G DV + P ++ N + V+CG +H+ A E
Sbjct: 885 H---GQLGTGETDVKKV-PNLITGLHNHRIKYVACGSSHSIAWTE 925
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 146/324 (45%), Gaps = 40/324 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G+ G+LGLG E+ P + + + ++K ++ GG H L L+ G V++ G + G
Sbjct: 1500 GYGNNGQLGLGYSETVTSPRLLESIKHINIKKISVHSGGRHCLALSSDGEVFSWGEGEDG 1559
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N S +P RI K + I G HS+AI ++GELY WGK G+LG G
Sbjct: 1560 KLG-HGNRQTSSQPKRIEFFCGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRLGHGDS 1618
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P +VE L F A G Q++ +T V SWG G G+LG G
Sbjct: 1619 DDQL--KPKQVEALQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRGG----- 1671
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S P +I++L G + G S + + G +Y +G ++ H
Sbjct: 1672 ----SDGCKVPMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYRLGHGTEEHV 1727
Query: 279 RRPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQG 316
RRP +++ GE+Y WG N+ G LG G+I +P +
Sbjct: 1728 RRPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGTIIARQTP-TLNT 1786
Query: 317 PFSESPVDQVSCGWKHTAAISEGK 340
+D++SCG HT A S K
Sbjct: 1787 FLLNKKIDRISCGSAHTIAWSTSK 1810
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 148/341 (43%), Gaps = 55/341 (16%)
Query: 87 TETGCVYATGLNDFGQLGI--SENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDG 142
T+ V+ATG + GQLG+ SE + LE ++ +KK + + +G H A++ DG
Sbjct: 1491 TDGALVFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKK--ISVHSGGRHCLALSSDG 1548
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E++ WG+ +G+LG G + P ++E G G S A+ G++ +WG
Sbjct: 1549 EVFSWGEGEDGKLGHGNRQTS--SQPKRIEFFCGKIITNICAGGSHSAAIGLNGELYTWG 1606
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVY 260
G GRLGHG S + P+ ++ L+ V A +G + CI + V+
Sbjct: 1607 KGRYGRLGHGD---------SDDQLKPKQVEALQFFFVLDVACGSGDAQTLCITNDDNVW 1657
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISG----------------------GELYTWGSNENG 298
+GD K+ + + P +I G LYTWG +
Sbjct: 1658 SWGDGDYGKLGRGGSDGCKVPMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYY 1717
Query: 299 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDG 357
LG G+ + + P V F++ V +SCG H + EG++ W G
Sbjct: 1718 RLGHGTEEHVRRPMMVTALFNKI-VTSISCGSLHCVVCTDEGEVYCW------------G 1764
Query: 358 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+ GQLG G + PT+ F N K ++SCG HT A
Sbjct: 1765 DNDEGQLGDGTIIARQTPTLNTFLLNKKIDRISCGSAHTIA 1805
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 117/267 (43%), Gaps = 54/267 (20%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
++ T + +S+ VD ++MWG N QLG G K +KV PT + LS + K A G
Sbjct: 545 ELCTLWENSTNKQVD--VFMWGLNDKDQLG-GLKGSKV-KSPTLCDHLSSLQCKFIAGGS 600
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+ + +T GK+ S G G+LG G I G + S PRL+ G+ I
Sbjct: 601 KSTFFITNKGKLYSCGESSFGKLGIGD---ITGNVTS-----PRLVT---GLNQLIVTKV 649
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSID 306
+HS GNH +L S G ++WG ENG LG G++
Sbjct: 650 SVHSG-----------------------GNHVM--ALTSDGLAFSWGDGENGQLGHGNLM 684
Query: 307 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKIL-TWGWGGSHGTFSEDGHSSGGQLG 365
P ++ F V +SCG H+AAI E K L TWG G G+LG
Sbjct: 685 SCSKPHLIEA-FVGKIVTDISCGSAHSAAIVENKYLYTWGLG------------DFGRLG 731
Query: 366 HGNDVDYIHPTIVNFGENVKALQVSCG 392
HG++ + P V +QVSCG
Sbjct: 732 HGDEETILQPKFVTHFLGYNVVQVSCG 758
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 64/127 (50%), Gaps = 6/127 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P++ + + CG ++ LT+ G +Y G D+ +
Sbjct: 1659 WGDGDYGKLGRGGSDGCKVPMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYR 1718
Query: 103 L--GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L G E++ P+ ++ L K V IS G H T +GE+Y WG N GQLG G
Sbjct: 1719 LGHGTEEHVR---RPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGT 1775
Query: 160 KAAKVIP 166
A+ P
Sbjct: 1776 IIARQTP 1782
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 117/287 (40%), Gaps = 61/287 (21%)
Query: 121 LKKEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
LK+ V+I + IT DG L + G +NGQLGLG ++ + P +E + I
Sbjct: 1475 LKEHNVKIDCD---TVCITTDGALVFATGYGNNGQLGLG--YSETVTSPRLLESIKHINI 1529
Query: 180 KQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
K+ ++ G +A++ G+V SWG G G+LGHG R TS P+ I+ G
Sbjct: 1530 KKISVHSGGRHCLALSSDGEVFSWGEGEDGKLGHGN--------RQTSS-QPKRIEFFCG 1580
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNEN 297
+ AG HSA I NG ELYTWG
Sbjct: 1581 KIITNICAGGSHSAAIGLNG------------------------------ELYTWGKGRY 1610
Query: 298 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWGGSHGTFSE 355
G LG G D P++V+ V V+CG T I+ + W WG
Sbjct: 1611 GRLGHGDSDDQLKPKQVEA-LQFFFVLDVACGSGDAQTLCITNDDNV-WSWG-------- 1660
Query: 356 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 402
DG G+LG G P I+ ++V CG + AL +Y
Sbjct: 1661 DG--DYGKLGRGGSDGCKVPMIIEDLSGKGIVKVECGSQFSMALTKY 1705
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 50/95 (52%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG G+ E RP++ +A + +++CG H + T+ G VY G ND GQ
Sbjct: 1711 WGKGDYYRLGHGTEEHVRRPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQ 1770
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
LG I L L K++ +IS G H+ A
Sbjct: 1771 LGDGTIIARQTPTLNTFLLNKKIDRISCGSAHTIA 1805
>gi|158257096|dbj|BAF84521.1| unnamed protein product [Homo sapiens]
Length = 815
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 179/385 (46%), Gaps = 59/385 (15%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAVSKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
+ + EN +YT+G + G LG+G+
Sbjct: 255 TVVLTENA-------------------------------VYTFGLGQFGQLGLGTFLFET 283
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
S +V + + +SCG HTA I++ G + T+G G HG LG N
Sbjct: 284 SEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG-DGRHGKLG---------LGLEN 333
Query: 369 DVDYIHPTIV-NFGENVKALQVSCG 392
++ PT+ NF + L V+CG
Sbjct: 334 FTNHFIPTLCSNFLRFIVKL-VACG 357
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 140/304 (46%), Gaps = 57/304 (18%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
V +S G HS+ +T + +LYM+G N+ GQLGLG K+A + PT V+ L K AA G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--VSKPTCVKALKPEKVKLAACG 95
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
++ T GG V + G G+LG G ++ F TSE+ K+
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI---------------- 284
K +AG SA + E+GR++++GD + ++ + ++ P +
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202
Query: 285 ----SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 338
+ GELY +G ENG LG+ + L R SE P V QV+CG +HT ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTG 397
+ T+G G GQLG G + + P ++ + +SCG NHT
Sbjct: 261 NAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTA 308
Query: 398 ALLE 401
+ +
Sbjct: 309 LITD 312
>gi|397488796|ref|XP_003815430.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Pan
paniscus]
Length = 815
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 179/385 (46%), Gaps = 59/385 (15%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAVSKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
+ + EN +YT+G + G LG+G+
Sbjct: 255 TVVLTENA-------------------------------VYTFGLGQFGQLGLGTFLFET 283
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
S +V + + +SCG HTA I++ G + T+G G HG LG N
Sbjct: 284 SEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG-DGRHGKLG---------LGLEN 333
Query: 369 DVDYIHPTIV-NFGENVKALQVSCG 392
++ PT+ NF + L V+CG
Sbjct: 334 FTNHFIPTLCSNFLRFIVKL-VACG 357
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 140/304 (46%), Gaps = 57/304 (18%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
V +S G HS+ +T + +LYM+G N+ GQLGLG K+A + PT V+ L K AA G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--VSKPTCVKALKPEKVKLAACG 95
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
++ T GG V + G G+LG G ++ F TSE+ K+
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI---------------- 284
K +AG SA + E+GR++++GD + ++ + ++ P +
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202
Query: 285 ----SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 338
+ GELY +G ENG LG+ + L R SE P V QV+CG +HT ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTG 397
+ T+G G GQLG G + + P ++ + +SCG NHT
Sbjct: 261 NAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTA 308
Query: 398 ALLE 401
+ +
Sbjct: 309 LITD 312
>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
mutus]
Length = 1019
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 156/336 (46%), Gaps = 61/336 (18%)
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIS 129
++L A G H+L L G V + G N GQLG + +P RI L+ V +S
Sbjct: 23 NTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG-RKGTPRGEQPERIPALETLHVALVS 81
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G HS A+ G ++ WG S GQLG+G+ IP K++ L+GI Q A G S
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTF-IPKKIKTLAGIKIIQVACGHYHS 140
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VA++ G+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG H
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGHH 192
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHA--RRPSLISGGELYTWGSNENGCLGIGSIDV 307
S + +G + +G ++ GN+A +R +S G L T G
Sbjct: 193 SFALSLSGTSFGWGSNNAGQLALS-GNNAPVQRYKPVSIGALKTLG-------------- 237
Query: 308 LHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGH 366
V +SCG+KHTA ++ +GK+ T+ G +S GQLGH
Sbjct: 238 ---------------VVSISCGYKHTAVLTQDGKVFTF------------GDNSYGQLGH 270
Query: 367 GNDVDYIHPTIVNFGENVKAL--QVSCGFNHTGALL 400
+ P +V E ++ L Q+ CG +HT A +
Sbjct: 271 DPTAEKRGPQLV---ERIEGLVSQIDCGSDHTLAYI 303
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 151/330 (45%), Gaps = 46/330 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG +P A E + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E + P +I L +++Q++ G++HS A++ DG+++ WG NS+GQLGLGK+
Sbjct: 108 GIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNNAGQL------ALSGNNA 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + ++G+V+ FGD + ++ R P
Sbjct: 221 PVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQ 280
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGK 340
L+ ER++G V Q+ CG HT A + G+
Sbjct: 281 LV---------------------------ERIEG-----LVSQIDCGSDHTLAYIYTTGQ 308
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
++++G G G S H G L +D+
Sbjct: 309 VVSFGRGP--GCASRSPHP--GALAESSDI 334
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 126/281 (44%), Gaps = 56/281 (19%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
++Q ++G HHS + DG + G NS GQLG +K P ++ L + +
Sbjct: 25 LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG--RKGTPRGEQPERIPALETLHVALVSC 82
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E S+AV G+V +WGA G+LG G+ F +T + P+ IK L G+K+ A
Sbjct: 83 GKEHSLAVCHKGRVFAWGAASEGQLGIGE------FKETT--FIPKKIKTLAGIKIIQVA 134
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG- 303
G HS + E+G+V+ +WG+N +G LG+G
Sbjct: 135 CGHYHSVALSEDGQVF------------------------------SWGTNSHGQLGLGK 164
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
SP+RV+ P+ QV+ G H+ A+S ++GWG ++ GQ
Sbjct: 165 EFPSQASPQRVRS-LEGIPLAQVAAGGHHSFALSLSGT-SFGWGSNNA----------GQ 212
Query: 364 L---GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
L G+ V P + + + + +SCG+ HT L +
Sbjct: 213 LALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQ 253
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 106/214 (49%), Gaps = 21/214 (9%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GG H+ L+ +G + G N+ G
Sbjct: 152 WGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNNAG 211
Query: 102 QLGISENIG--YSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N +P+ I LK VV IS GY H++ +T DG+++ +G NS GQLG
Sbjct: 212 QLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGG-----SGRLGHG 212
A K P VE + G+ + Q G + ++A + G+V+S+G G S G
Sbjct: 272 PTAEKR--GPQLVERIEGLVS-QIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGAL 328
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
ESS + L S K+L V+VK AG
Sbjct: 329 AESSDISCLVSA--------KDLADVQVKHIFAG 354
>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
Length = 4167
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 162/386 (41%), Gaps = 61/386 (15%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G +YG L LG S + F +++ +A G + + G V+ GLN GQ
Sbjct: 475 GQNNYGELCLGHCNSTSKLEHVPFFSAKAIRDIAGGNEVLAVVMKDGAVFTCGLNKSGQC 534
Query: 104 G---ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G E + + +SG+ +V + G H A+ DG +Y WG N GQLGLG
Sbjct: 535 GNGTFEERVIIATPVRALSGIVINMVAAANGCEHMLAVASDGAVYSWGYNDRGQLGLGST 594
Query: 161 AAKVIPIPTKVECLSGIF-TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--HGQESSI 217
+K P ++ L + AA+ + S V+ G++L +G G+LG H Q
Sbjct: 595 ISKSH-TPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFGMNDCGQLGLDHTQH--- 650
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
++TP+L+ L + A G H+ I G VY FG ++ +
Sbjct: 651 --------QHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLGHARN 702
Query: 278 ARRPSLI-------------------------SGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ P+L+ G+L TWG N+ G LGIGS D +S +
Sbjct: 703 MKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKDHKNSAQ 762
Query: 313 RVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN--- 368
V P S S + SCG HT + S G+++ + G ++ GQLG G+
Sbjct: 763 YVPLPLS-SKIKTASCGCYHTLILMSNGRVMVF------------GRNNKGQLGAGSRTL 809
Query: 369 -DVDYIHPTIVNFGENVKALQVSCGF 393
D P N N + ++++ GF
Sbjct: 810 PSADLPLPVPSNSLANDEVVRIAAGF 835
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 123/227 (54%), Gaps = 18/227 (7%)
Query: 43 WGNGDYGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG D G+LGLGS +S ++ S EK+ + A H+ ++ G + G+ND
Sbjct: 581 WGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFGMNDC 640
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+ ++ + P + L +V+ +++ G +H+ AIT GE+Y +GKN GQLGLG
Sbjct: 641 GQLGL-DHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLGH 699
Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
A+ + +PT V+ G ++ + G+ +V ++ GK+++WG G+LG G +
Sbjct: 700 --ARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKDH 757
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+++++Y P + K+K A+ G H+ + NGRV +FG
Sbjct: 758 -----KNSAQYVPLPLSS----KIKTASCGCYHTLILMSNGRVMVFG 795
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 18/216 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G D G+LGL + + P + + + +ACG HT+ +T G VY+ G ND+G
Sbjct: 634 MFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYG 693
Query: 102 QLGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG+ + L + L +++V +S GY+H+ I+ G+L WG+N GQLG+G
Sbjct: 694 QLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIG 753
Query: 159 ----KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
K +A+ +P+P + K A+ G ++ + G+V+ +G G+LG G
Sbjct: 754 SKDHKNSAQYVPLPLSSK------IKTASCGCYHTLILMSNGRVMVFGRNNKGQLGAGSR 807
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+ L S P L +V AAGF S
Sbjct: 808 T-----LPSADLPLPVPSNSLANDEVVRIAAGFYSS 838
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 139/317 (43%), Gaps = 59/317 (18%)
Query: 92 VYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
+++ G N++G+L + N LE + K + I+ G + + DG ++ G N
Sbjct: 471 LFSCGQNNYGELCLGHCNSTSKLEHVPFFS-AKAIRDIAGGNEVLAVVMKDGAVFTCGLN 529
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AALGFEQSVAVTGGGKVLSWGAGGSGR 208
+GQ G G +VI I T V LSGI AA G E +AV G V SWG G+
Sbjct: 530 KSGQCGNGTFEERVI-IATPVRALSGIVINMVAAANGCEHMLAVASDGAVYSWGYNDRGQ 588
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LG G S+I + +TPR+I L E + AA + HSA + NG
Sbjct: 589 LGLG--STI------SKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNG---------- 630
Query: 268 DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
EL +G N+ G LG+ H+P+ V S + +V+
Sbjct: 631 --------------------ELLMFGMNDCGQLGLDHTQHQHTPQLVDS-LSSQVITEVA 669
Query: 328 CGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV--NFGE-NV 384
CG HT AI+ G G G + GQLG G+ + PT+V + GE +
Sbjct: 670 CGLYHTIAITSG-----------GEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDE 718
Query: 385 KALQVSCGFNHTGALLE 401
K + VSCG+ HT + E
Sbjct: 719 KIVAVSCGYYHTVTISE 735
>gi|4506581|ref|NP_000319.1| X-linked retinitis pigmentosa GTPase regulator isoform A [Homo
sapiens]
gi|1314871|gb|AAC50481.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
gi|2204218|emb|CAA66258.1| XLRP3 [Homo sapiens]
gi|119579845|gb|EAW59441.1| retinitis pigmentosa GTPase regulator, isoform CRA_a [Homo sapiens]
Length = 815
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 179/385 (46%), Gaps = 59/385 (15%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
+ + EN +YT+G + G LG+G+
Sbjct: 255 TVVLTENA-------------------------------VYTFGLGQFGQLGLGTFLFET 283
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
S +V + + +SCG HTA I++ G + T+G G HG LG N
Sbjct: 284 SEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG-DGRHGKLG---------LGLEN 333
Query: 369 DVDYIHPTIV-NFGENVKALQVSCG 392
++ PT+ NF + L V+CG
Sbjct: 334 FTNHFIPTLCSNFLRFIVKL-VACG 357
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 57/304 (18%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
V +S G HS+ +T + +LYM+G N+ GQLGLG K+A I PT V+ L K AA G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
++ T GG V + G G+LG G ++ F TSE+ K+
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI---------------- 284
K +AG SA + E+GR++++GD + ++ + ++ P +
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202
Query: 285 ----SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 338
+ GELY +G ENG LG+ + L R SE P V QV+CG +HT ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTG 397
+ T+G G GQLG G + + P ++ + +SCG NHT
Sbjct: 261 NAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTA 308
Query: 398 ALLE 401
+ +
Sbjct: 309 LITD 312
>gi|62898714|dbj|BAD97211.1| retinitis pigmentosa GTPase regulator variant [Homo sapiens]
Length = 815
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 179/385 (46%), Gaps = 59/385 (15%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
+ + EN +YT+G + G LG+G+
Sbjct: 255 TVVLTENA-------------------------------VYTFGLGQFGQLGLGTFLFET 283
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
S +V + + +SCG HTA I++ G + T+G G HG LG N
Sbjct: 284 SEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG-DGRHGKLG---------LGLEN 333
Query: 369 DVDYIHPTIV-NFGENVKALQVSCG 392
++ PT+ NF + L V+CG
Sbjct: 334 FTNHFIPTLCSNFLRFIVKL-VACG 357
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 57/304 (18%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
V +S G HS+ +T + +LYM+G N+ GQLGLG K+A I PT V+ L K AA G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
++ T GG V + G G+LG G ++ F TSE+ K+
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI---------------- 284
K +AG SA + E+GR++++GD + ++ + ++ P +
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202
Query: 285 ----SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 338
+ GELY +G ENG LG+ + L R SE P V QV+CG +HT ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTG 397
+ T+G G GQLG G + + P ++ + +SCG NHT
Sbjct: 261 NAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTA 308
Query: 398 ALLE 401
+ +
Sbjct: 309 LITD 312
>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
Length = 4833
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 138/301 (45%), Gaps = 46/301 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG GS RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4067 WGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4126
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4127 LGHSDSED-QLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4184
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4185 -GSDGCKVPMKIESLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4241
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4242 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4272
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4273 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4323
Query: 340 K 340
K
Sbjct: 4324 K 4324
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 138/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3074 WGEGDDGKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3133
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3134 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3191
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3192 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3248
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 3249 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 3282
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3283 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3326
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3961 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4018
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ ++K V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4019 GRLGIGGTESVSAPTLLESIQHVFIRK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4076
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P VE L GI A G S VT G + +WG G GRLGH
Sbjct: 4077 HGSRSP--CDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4131
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4132 ------SEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4185
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4186 SDGCKVPMKIESLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4245
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4246 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4292
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4293 IQRPRLVAALQGKKVNRVACGSAHTLA 4319
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 182/397 (45%), Gaps = 56/397 (14%)
Query: 32 SSTLQRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTET 89
SS R +WG D +LG G S+ + P ++ +A GG+ +LF +T
Sbjct: 2956 SSAAVRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVA-GGSKSLFAVTVE 3013
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYM 146
G VYA G G+LG+ + G P +I+ L VV+ + +G H++A+TVDG+++
Sbjct: 3014 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3073
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG+ +G+LG + P +E L + A G S A+T G++ +WG G
Sbjct: 3074 WGEGDDGKLGHFSRMN--CDKPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLGEY 3131
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGD 264
GRLGHG +T++ P+++K L G +V A G + + + G V+ +GD
Sbjct: 3132 GRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 3182
Query: 265 -----------------RAVDKMLFQ-----EGNHARRPSLISGGELYTWGSNENGCLGI 302
+ ++++ Q E +L G ++TWG + LG
Sbjct: 3183 GDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3242
Query: 303 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 361
GS + P+ V+G + V+ G H A+++ G++ WG ++ H
Sbjct: 3243 GSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---------DNDH--- 3289
Query: 362 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3290 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3326
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQGGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + SVA+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ PRL++ L G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 133/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG V++ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVFSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQGGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ ++V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLEVVKVRCGSQFSVA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 144/350 (41%), Gaps = 75/350 (21%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLS- 175
+ +V+I+ + HH A+ GE++ WG G+LG G +P+ P + S
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547
Query: 176 ---GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
G A G S A+T G++ +WG G GRLGHG S E P L+
Sbjct: 548 KQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIPMLV 598
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW 292
L+G+KV A G GD A+ ++ G++++W
Sbjct: 599 AGLKGLKVIDVACG---------------SGD-------------AQTLAVTENGQVWSW 630
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 351
G + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG G +
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEK-LQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQ- 688
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHG + +P ++ K + V+ G H AL E
Sbjct: 689 -----------RLGHGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTE 727
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 118/272 (43%), Gaps = 54/272 (19%)
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G S+A+ ++++WG N QLG G K +K I +P+ E LS + Q A G +
Sbjct: 2951 SAGLESSAAVRT--KVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKS 3006
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
AVT GKV + G +GRLG G L S + PR I L VK A +
Sbjct: 3007 LFAVTVEGKVYACGEATNGRLGLG--------LSSGTVPIPRQITALSSYVVKKVA---V 3055
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVL 308
HS G HA +L G++++WG ++G LG S
Sbjct: 3056 HSG-----------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNC 3090
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
P ++ + ++CG H+AA+ S G++ TWG G G+LGHG
Sbjct: 3091 DKPRLIEA-LRAKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHG 3137
Query: 368 NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
++ + P +V + +QV+CG L
Sbjct: 3138 DNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3169
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 109/252 (43%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3956 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4013
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ P L++ ++ V F+ ++ G+ +
Sbjct: 4014 GYGAGGRLGIGGTESV---------SAPTLLESIQHV--------FIRKVAVNSGGKHCL 4056
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG GS P V+
Sbjct: 4057 --------------------ALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVVESLRGIE 4096
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4097 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEV 4143
Query: 381 GENVKALQVSCG 392
+ + + V+CG
Sbjct: 4144 LQGHRVVDVACG 4155
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
WG GD RLG G+ E P + + +A G H L LTE V++ G ND
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
F L +++ EP + GL K +V I+ G S A
Sbjct: 742 HFDTLRVTKP-----EPAALPGLDTKHIVGIACGPAQSFA 776
>gi|242059927|ref|XP_002459109.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
gi|241931084|gb|EES04229.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
Length = 892
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 163/374 (43%), Gaps = 72/374 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + A +++ +ACG HT +T +G +Y G F
Sbjct: 134 WGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 193
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P ++G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 194 GLLGHGNDVSHWV-PKHVNGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 252
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + I +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 253 DRES--ISVPREVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDK 310
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L F AC
Sbjct: 311 GRLGHGDKEAKL---------VPTCVAAL-------VEPNFCQVAC-------------- 340
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
H +L + G +YT GS G LG D + P RV+G ++ V+++
Sbjct: 341 ---------GHCLTVALTTSGHVYTMGSAVYGQLGNTQADGM-LPVRVEGKLHKNFVEEI 390
Query: 327 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 385
SCG H A + S ++ TWG G + G+LGHG+ D PT+V ++ +
Sbjct: 391 SCGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDKNTPTLVEALKDKQ 438
Query: 386 ALQVSCGFNHTGAL 399
V CG N T A+
Sbjct: 439 VRSVVCGINFTAAI 452
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 125/302 (41%), Gaps = 71/302 (23%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL + ++ +V IS G H++ +T GE+Y WG+ S G+LG G + P ++
Sbjct: 102 KPLEFA-VRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VSQPKLIDA 158
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
LS + + A G + AVT G + +WG G G LGHG + S + P+
Sbjct: 159 LSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGND---------VSHWVPKH 209
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
+ LEG+ V + G H+A + G+++ FGD +
Sbjct: 210 VNGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSF----------------------- 246
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------------ 338
G LG G + + P V+ V + +CG HTAA+ E
Sbjct: 247 -------GVLGHGDRESISVPREVESLKGLRTV-RAACGVWHTAAVVEVMAGNSSSSNCS 298
Query: 339 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
GKI TWG G G+LGHG+ + PT V QV+CG T
Sbjct: 299 SGKIFTWGDGDK------------GRLGHGDKEAKLVPTCVAALVEPNFCQVACGHCLTV 346
Query: 398 AL 399
AL
Sbjct: 347 AL 348
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 52/239 (21%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + + G + VT G++ SWG GRLGHG + +
Sbjct: 100 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDV--------- 150
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
P+LI L + +++ A G H+ + +G +Y +GD
Sbjct: 151 SQPKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGD---------------------- 188
Query: 287 GELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTW 344
G+ + G LG G+ DV H P+ V GP V +SCG HTA + S G++ T+
Sbjct: 189 ------GTFKFGLLGHGN-DVSHWVPKHVNGPLEGIHVSSISCGPWHTALVTSAGQLFTF 241
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
G G S G LGHG+ P V + ++ ++ +CG HT A++E +
Sbjct: 242 GDG------------SFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAVVEVM 288
>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
Length = 1053
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 159/369 (43%), Gaps = 71/369 (19%)
Query: 43 WGNGDYGRLGLGSLESR---------WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WGN +G+LGLG +E W+P ++ +ACG HTLFLT +G VY
Sbjct: 6 WGNASHGQLGLGGIEEEQILTPSRIPWKP-------DSAVNQIACGHRHTLFLTASGKVY 58
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSN 152
A G ND+ QLG + PL+I L+ V+ QI+ G HS A++ G+++ WG N
Sbjct: 59 ACGSNDYSQLGHELP---TKRPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNEC 115
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG ++ +P V L Q A G S+A+T G++ SWG+ G+LG
Sbjct: 116 GQLGHASD-QDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNLYGQLGVS 174
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
+ + TP + L G+ V A G HS I ++ V FG
Sbjct: 175 SPNDL------QQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAV--FG--------- 217
Query: 273 QEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 332
WG N G LG+ P +++ V V+CG +
Sbjct: 218 -------------------WGRNNCGQLGLNDETNRAYPTQLKT-LRTLGVRFVACGDEF 257
Query: 333 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 391
+ ++ EG + T G G GQLGHG + + P +V QV+C
Sbjct: 258 SVFLTIEGGVFTCGAGAY------------GQLGHGFSSNEMLPRMVMELMGSTISQVAC 305
Query: 392 GFNHTGALL 400
G HT AL+
Sbjct: 306 GNRHTLALV 314
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 145/339 (42%), Gaps = 58/339 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ DY +LG L ++ RP+ + + + +ACG H++ L+E G V++ G N+ GQL
Sbjct: 61 GSNDYSQLG-HELPTK-RPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNECGQL 118
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GKKA 161
G + + P + L K VVQI+ G +HS A+T GELY WG N GQLG+
Sbjct: 119 GHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNLYGQLGVSSPND 178
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P ++ L GI A G S ++ V WG G+LG E
Sbjct: 179 LQQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDE------- 231
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
T+ P +K L + V+ A G + V++
Sbjct: 232 --TNRAYPTQLKTLRTLGVRFVACG--------DEFSVFL-------------------- 261
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEG 339
I GG ++T G+ G LG G P R+ S + QV+CG +HT A+ S G
Sbjct: 262 -TIEGG-VFTCGAGAYGQLGHGFSSNEMLP-RMVMELMGSTISQVACGNRHTLALVPSRG 318
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
+I +G G S GQLG N P +V
Sbjct: 319 RIYGFGLG------------SSGQLGTRNTKSLNLPQLV 345
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 120/278 (43%), Gaps = 53/278 (19%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P+++ Q A G ++ +T GKV + G
Sbjct: 2 ELYCWGNASHGQLGLGGIEEEQILTPSRIPWKPDSAVNQIACGHRHTLFLTASGKVYACG 61
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ +LGH + P I EL+ + A G HS + E G+V+ +
Sbjct: 62 SNDYSQLGHELPTK-----------RPLQIPELQDYVITQIACGSRHSMALSEWGQVFSW 110
Query: 263 GDRA----------------------VDKMLFQEG---NHARRPSLISGGELYTWGSNEN 297
GD V K + Q NH+ +L GELY+WGSN
Sbjct: 111 GDNECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSL--ALTCCGELYSWGSNLY 168
Query: 298 GCLGIGSIDVL---HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFS 354
G LG+ S + L ++P R+ PV ++CG H+ IS+ + +GW
Sbjct: 169 GQLGVSSPNDLQQSNTPMRLTTLLG-IPVSAIACGGNHSFLISKSSAV-FGW-------- 218
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
G ++ GQLG ++ + +PT + + V+CG
Sbjct: 219 --GRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACG 254
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL +R P ++ +ACG ++FLT G V+ G +GQ
Sbjct: 218 WGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQ 277
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
LG + L + + + + Q++ G H+ A+ G +Y +G S+GQLG
Sbjct: 278 LGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRNTK 337
Query: 162 AKVIP 166
+ +P
Sbjct: 338 SLNLP 342
>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
Length = 5093
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4322 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGR 4381
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4382 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4439
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4440 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4496
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4497 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4527
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4528 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4578
Query: 340 KILTWG 345
K + G
Sbjct: 4579 KPASAG 4584
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 138/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3332 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3391
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3392 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3449
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3450 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3506
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 3507 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 3540
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P V G + +V+CG H+ A
Sbjct: 3541 -----------AWGDNDHGQQGNGTTTVNRKPTLVHG-LEGQKITRVACGSSHSVA 3584
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 4216 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4273
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4274 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4331
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4332 HGNRSP--CDRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4386
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4387 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4440
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4441 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4500
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4501 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4547
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4548 IQRPRLVAALQGKKVNRVACGSAHTLA 4574
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 164/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +++ L VV+ + +G H
Sbjct: 3260 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRH 3319
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3320 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3377
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3378 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3428
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3429 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3488
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3489 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3543
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V+ E K +V+CG +H+ A
Sbjct: 3544 -----DNDH---GQQGNGTTTVNRKPTLVHGLEGQKITRVACGSSHSVA 3584
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 765 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISTFSGKQAGKHVVHIACGSTY 823
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 824 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 881
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 882 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 932
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 933 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 992
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 993 SWGSNDQ-CQHFDTLRVT-KPEPTALPGLDT---------KHIVGIACGPAQSFAW 1037
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V S F KH + +ACG ++ +T G +Y G
Sbjct: 780 WGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 838
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 839 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 897
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 898 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 955
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 956 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 995
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 148/353 (41%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 703 PIQCEGLASLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 751
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 752 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISTFSG 807
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 808 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 855
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV A G GD A+ ++ G++
Sbjct: 856 MLVAGLKGLKVIDVACG---------------SGD-------------AQTLAVTENGQV 887
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG G
Sbjct: 888 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 946
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 947 NQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 987
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 836 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 895
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 896 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 954
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 955 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 997
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 116/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 3214 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3271
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G L S + PR + L VK A +HS
Sbjct: 3272 GKVYACGEATNGRLGLG--------LSSGTVPIPRQVTALSSYVVKKVA---VHSG---- 3316
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3317 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3355
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3356 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3402
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3403 PKMVKVLLGHRVIQVACGSRDAQTL 3427
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 126/332 (37%), Gaps = 101/332 (30%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 4211 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4269
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4270 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4329
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4330 LGHGNRSPC---------DRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYG 4380
Query: 269 KMLFQEGNHARRPSLISGGE------------------------LYTWGSNENGCLGIGS 304
++ + +P L+ + +++WG + G LG G
Sbjct: 4381 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4440
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 363
D P ++ + V +V CG + + A+++ G + TWG G H +
Sbjct: 4441 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4487
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
LGHG+D P V + K + ++ G H
Sbjct: 4488 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4519
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 890 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 949
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 950 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 1006
Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVA 191
+ K P PT L G+ TK A G QS A
Sbjct: 1007 RVTK--PEPT---ALPGLDTKHIVGIACGPAQSFA 1036
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 86/217 (39%), Gaps = 33/217 (15%)
Query: 194 GGGKVLSWGAGGSGRLG--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
G G + WG G+LG G + + + + P + E + A G L++
Sbjct: 4209 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4268
Query: 252 CIDENGRVYIFGDRAVDKMLFQE---------------GNHARRPSLISGGELYTWGSNE 296
GR+ I G +V E G H +L S GE+Y+WG E
Sbjct: 4269 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCL--ALSSEGEVYSWGEAE 4326
Query: 297 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSE 355
+G LG G+ P RV V V+ G H+A ++ G + TWG G
Sbjct: 4327 DGKLGHGNRSPCDRP-RVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKG-------- 4377
Query: 356 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
G+LGH + D + P +V + + + ++CG
Sbjct: 4378 ----RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 4410
>gi|18073943|emb|CAC86116.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
Length = 815
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 179/385 (46%), Gaps = 59/385 (15%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GNPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
+ + EN +YT+G + G LG+G+
Sbjct: 255 TVVLTENA-------------------------------VYTFGLGQFGQLGLGTFLFET 283
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
S +V + + +SCG HTA I++ G + T+G G HG LG N
Sbjct: 284 SEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG-DGRHGKLG---------LGLEN 333
Query: 369 DVDYIHPTIV-NFGENVKALQVSCG 392
++ PT+ NF + L V+CG
Sbjct: 334 FTNHFIPTLCSNFLRFIVKL-VACG 357
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 57/304 (18%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
V +S G HS+ +T + +LYM+G N+ GQLGLG K+A I PT V+ L K AA G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
++ T GG V + G G+LG G ++ F TSE+ K+
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI---------------- 284
K +AG SA + E+GR++++GD + ++ + ++ P +
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGNPVSWISCGYYHS 202
Query: 285 ----SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 338
+ GELY +G ENG LG+ + L R SE P V QV+CG +HT ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTG 397
+ T+G G GQLG G + + P ++ + +SCG NHT
Sbjct: 261 NAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTA 308
Query: 398 ALLE 401
+ +
Sbjct: 309 LITD 312
>gi|224075844|ref|XP_002304793.1| predicted protein [Populus trichocarpa]
gi|222842225|gb|EEE79772.1| predicted protein [Populus trichocarpa]
Length = 1099
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 178/368 (48%), Gaps = 68/368 (18%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
++A+ACG H +T+ G V++ G G+LG + ++ + P + GLK V+ ++
Sbjct: 307 VQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH---PKFVDGLKNFNVELVA 363
Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
G +HS A+T+ G+LY+WG N+ G LG G +A + +P K++ L GI + G
Sbjct: 364 CGEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVP--RKLDGPLEGIHVSSVSCGP 421
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+ VT G++ ++G G G LGHG S+ PR ++ L+G++ AA G
Sbjct: 422 WHTAVVTSAGQLFTFGDGTFGVLGHGDRISV---------SIPREVESLKGLRTMRAACG 472
Query: 247 FLHSACIDE------------NGRVYIFGD-------------RAVDKML--FQEGN--- 276
H+A + E +G+++ +GD R V + E N
Sbjct: 473 VWHTAAVVEIMVGSSNSSNCSSGKLFTWGDGDKCRLGHGDKEARLVPTCVATLVEPNFCQ 532
Query: 277 ----HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 332
H+ +L + G++YT GS G LG D + P RV+G ++ V++++CG H
Sbjct: 533 VACGHSLTAALTTTGQVYTMGSPVYGQLGNPQADGML-PTRVEGKLMKNFVEELACGAYH 591
Query: 333 TAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 391
A + S ++ TWG G + G+LGHG+ D P++V ++ + + C
Sbjct: 592 VAVLTSRTEVYTWGKGAN------------GRLGHGDADDRNSPSVVEALKDKQVKGIVC 639
Query: 392 GFNHTGAL 399
G + T A+
Sbjct: 640 GTSFTAAI 647
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 141/333 (42%), Gaps = 53/333 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN--DF 100
WG GRLG G P + +++ +ACG H+ +T +G +Y G N +F
Sbjct: 329 WGEELGGRLGHGVDSDVSHPKFVDGLKNFNVELVACGEYHSCAVTLSGDLYIWGGNAYNF 388
Query: 101 GQLGI-SENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G LG SE + P ++ G + V +S G H++ +T G+L+ +G + G LG
Sbjct: 389 GLLGCGSEATQWV--PRKLDGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH 446
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGG 205
G + + + IP +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 447 GDRIS--VSIPREVESLKGLRTMRAACGVWHTAAVVEIMVGSSNSSNCSSGKLFTWGDGD 504
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI---- 261
RLGHG + + L P + L A G +A + G+VY
Sbjct: 505 KCRLGHGDKEARL---------VPTCVATLVEPNFCQVACGHSLTAALTTTGQVYTMGSP 555
Query: 262 ----FGDRAVDKMLFQ--EGNHARR------------PSLISGGELYTWGSNENGCLGIG 303
G+ D ML EG + L S E+YTWG NG LG G
Sbjct: 556 VYGQLGNPQADGMLPTRVEGKLMKNFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHG 615
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 336
D +SP V+ + V + CG TAAI
Sbjct: 616 DADDRNSPSVVEA-LKDKQVKGIVCGTSFTAAI 647
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 103/238 (43%), Gaps = 50/238 (21%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G + + VT G+V SWG GRLGHG +S +
Sbjct: 295 VPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDV--------- 345
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
P+ + L+ V++ A G HS + +G +YI+ G
Sbjct: 346 SHPKFVDGLKNFNVELVACGEYHSCAVTLSGDLYIW-----------------------G 382
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 345
G Y + G LG GS P ++ GP V VSCG HTA + S G++ T+G
Sbjct: 383 GNAYNF-----GLLGCGSEATQWVPRKLDGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 437
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
GTF G LGHG+ + P V + ++ ++ +CG HT A++E +
Sbjct: 438 ----DGTF--------GVLGHGDRISVSIPREVESLKGLRTMRAACGVWHTAAVVEIM 483
>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 1656 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 1715
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 1716 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 1773
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 1774 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 1830
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 1831 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 1861
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 1862 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 1912
Query: 340 KILTWG 345
K + G
Sbjct: 1913 KPASAG 1918
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 142/304 (46%), Gaps = 46/304 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 664 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 723
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 724 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 781
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 782 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 838
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 839 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 872
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
WG N++G G G+ V P VQG + +V+CG H+ A +
Sbjct: 873 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 920
Query: 340 KILT 343
+ T
Sbjct: 921 DVAT 924
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 1550 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 1607
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 1608 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 1665
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 1666 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 1720
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 1721 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 1774
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 1775 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 1834
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 1835 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 1881
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 1882 IQRPRLVAALQGKKVNRVACGSAHTLA 1908
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 592 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 651
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 652 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 709
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 710 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 760
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 761 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 820
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 821 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 875
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 876 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 916
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 114/258 (44%), Gaps = 52/258 (20%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 546 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 603
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 604 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 648
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 649 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 687
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 688 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 734
Query: 375 PTIVNFGENVKALQVSCG 392
P +V + +QV+CG
Sbjct: 735 PKMVKVLLGHRVIQVACG 752
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 1545 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 1602
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 1603 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 1645
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 1646 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 1685
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 1686 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 1732
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 1733 LQGHRVVDIACG 1744
>gi|300122163|emb|CBK22737.2| unnamed protein product [Blastocystis hominis]
Length = 355
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 123/240 (51%), Gaps = 14/240 (5%)
Query: 26 ICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF 85
IC +++ + WG G +GRLG E+ P + +ACG HTL
Sbjct: 110 ICDGHMAAVTEDGSVWTWGRGTFGRLGHEVHETGI-PEKVPGLDGMRFVKVACGHVHTLA 168
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL 144
LT+ G V+A G N G +G+S+ + P I L+ K+++ IS G S+A++ + E+
Sbjct: 169 LTDDGRVFAWGNNKTGCVGVSDR--GTCAPQEIESLRGKKIIDISAGMESSAALSAEHEV 226
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
Y WG ++ GQLGLG + A+ I PT++ L + Q A G +A++ G+V +WG G
Sbjct: 227 YTWGADNYGQLGLG-QGARYISQPTRIRTLRNVPIVQIACGQYHMLALSAAGEVYAWGQG 285
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+ + + P +I L+ +VK+ AAG HSA +D+ GR++ G+
Sbjct: 286 LQGQTAN---------EKKVDTNIPHVIDALKESRVKMIAAGGSHSAVVDDKGRLFTVGE 336
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 150/365 (41%), Gaps = 66/365 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G +G+LG+G+ P + + A G T +T+ G ++ G D Q
Sbjct: 19 WGSGQFGQLGIGTQNDESLPQIAKEIDNEICTFTAAGANTTAAITQGGVLWTFGQGDSNQ 78
Query: 103 LGISENIGYSLEPL------RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
LG + S + L GL VV S H +A+T DG ++ WG+ + G+LG
Sbjct: 79 LGHGDTGDCSNQVLPREVEDAFDGLS--VVNCSICDGHMAAVTEDGSVWTWGRGTFGRLG 136
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
IP KV L G+ + A G ++A+T G+V +WG +G +G
Sbjct: 137 ---HEVHETGIPEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAWGNNKTGCVG------ 187
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ P+ I+ L G K+ +AG SA
Sbjct: 188 ----VSDRGTCAPQEIESLRGKKIIDISAGMESSA------------------------- 218
Query: 277 HARRPSLISGGELYTWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
+L + E+YTWG++ G LG+G + P R++ P+ Q++CG H A
Sbjct: 219 -----ALSAEHEVYTWGADNYGQLGLGQGARYISQPTRIR-TLRNVPIVQIACGQYHMLA 272
Query: 336 IS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
+S G++ WG G GQ + VD P +++ + + ++ G +
Sbjct: 273 LSAAGEVYAWGQGLQ------------GQTANEKKVDTNIPHVIDALKESRVKMIAAGGS 320
Query: 395 HTGAL 399
H+ +
Sbjct: 321 HSAVV 325
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 125/282 (44%), Gaps = 46/282 (16%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G LY WG GQLG+G + + +P K + A G + A+T GG + ++
Sbjct: 14 GYLYTWGSGQFGQLGIGTQNDESLPQIAKE--IDNEICTFTAAGANTTAAITQGGVLWTF 71
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVY 260
G G S +LGHG +++ PR +++ +G+ V + H A + E+G V+
Sbjct: 72 GQGDSNQLGHGDTGD------CSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVW 125
Query: 261 IFGD-------------------RAVDKMLFQE--GNHARRPSLISGGELYTWGSNENGC 299
+G +D M F + H +L G ++ WG+N+ GC
Sbjct: 126 TWGRGTFGRLGHEVHETGIPEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAWGNNKTGC 185
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGH 358
+G+ +P+ ++ + +D +S G + +AA+S E ++ TW G
Sbjct: 186 VGVSDRGTC-APQEIESLRGKKIID-ISAGMESSAALSAEHEVYTW------------GA 231
Query: 359 SSGGQLGHGNDVDYI-HPTIVNFGENVKALQVSCGFNHTGAL 399
+ GQLG G YI PT + NV +Q++CG H AL
Sbjct: 232 DNYGQLGLGQGARYISQPTRIRTLRNVPIVQIACGQYHMLAL 273
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG +YG+LGLG +R+ +P + +ACG H L L+ G VYA G
Sbjct: 229 WGADNYGQLGLGQ-GARYISQPTRIRTLRNVPIVQIACGQYHMLALSAAGEVYAWGQGLQ 287
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSN 152
GQ + + ++ P I LK+ V+ I+ G HS+ + G L+ G+ +
Sbjct: 288 GQTANEKKVDTNI-PHVIDALKESRVKMIAAGGSHSAVVDDKGRLFTVGEEED 339
>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
Length = 1052
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 115/373 (30%), Positives = 165/373 (44%), Gaps = 70/373 (18%)
Query: 43 WGNGDYGRLGLGSLESR---------WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WGN +G+LGLG +E W+P ++ +ACG HTLFLT +G VY
Sbjct: 6 WGNASHGQLGLGGIEDEQILTPSKMPWQP-------DSAVNQIACGHRHTLFLTASGKVY 58
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSN 152
A G ND+ QLG + S PL+I L V+ QI+ G HS A+T G++ WG N
Sbjct: 59 ACGSNDYAQLGHELS---SKRPLQIPELVDCVITQIACGSRHSMALTEWGQVLSWGDNEC 115
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG V+ +P V L Q A G S+A+T G++ +WG+ G+LG
Sbjct: 116 GQLGHASD-QDVVQLPKTVRALVSKTVVQIACGNNHSLALTCCGELYAWGSNIYGQLG-- 172
Query: 213 QESSILGFLRSTSEY----TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
+++ SE P L+ L G+ V+ A G HS I ++ V+ +G
Sbjct: 173 --------VKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCG 224
Query: 269 KM-LFQEGNHARRPSLIS-----------GGELYTWGSNENGCL--GIGSIDVL------ 308
++ L E N A L + G E + +NE G G G+ L
Sbjct: 225 QLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFCG 284
Query: 309 -HSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLG 365
R+ S + QV+CG +HT A+ + G+I +G G S GQLG
Sbjct: 285 NEMLPRMVMELMGSTISQVACGNRHTLAMVPARGRIYGFGLG------------SSGQLG 332
Query: 366 HGNDVDYIHPTIV 378
N P +V
Sbjct: 333 TRNTKSLNLPQMV 345
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 131/300 (43%), Gaps = 38/300 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ DY +LG L S+ RP+ + +ACG H++ LTE G V + G N+ GQL
Sbjct: 61 GSNDYAQLG-HELSSK-RPLQIPELVDCVITQIACGSRHSMALTEWGQVLSWGDNECGQL 118
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G + + P + L K VVQI+ G +HS A+T GELY WG N GQLG+ K +
Sbjct: 119 GHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLALTCCGELYAWGSNIYGQLGV-KTPS 177
Query: 163 KV--IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ P + L GI + A G S ++ V WG G+LG E
Sbjct: 178 ELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDE------ 231
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY-------------IFGDRAV 267
T+ P +K L + V+ A G S + G V+ G+ +
Sbjct: 232 ---TNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFCGNEML 288
Query: 268 DKMLFQE----------GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
+M+ + GN + + G +Y +G +G LG + L+ P+ V GP
Sbjct: 289 PRMVMELMGSTISQVACGNRHTLAMVPARGRIYGFGLGSSGQLGTRNTKSLNLPQMVIGP 348
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 114/276 (41%), Gaps = 49/276 (17%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P+K+ Q A G ++ +T GKV + G
Sbjct: 2 ELYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSAVNQIACGHRHTLFLTASGKVYACG 61
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ +LGH S P I EL + A G HS + E G+V +
Sbjct: 62 SNDYAQLGH-----------ELSSKRPLQIPELVDCVITQIACGSRHSMALTEWGQVLSW 110
Query: 263 GDR-------AVDKMLFQEGNHAR----------------RPSLISGGELYTWGSNENGC 299
GD A D+ + Q R +L GELY WGSN G
Sbjct: 111 GDNECGQLGHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLALTCCGELYAWGSNIYGQ 170
Query: 300 LGIGSIDVL---HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 356
LG+ + L ++P + PV ++CG H+ IS+ + +GW
Sbjct: 171 LGVKTPSELGQCNAPMLLTTLLG-IPVRAIACGGNHSFLISKSSAV-FGW---------- 218
Query: 357 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
G ++ GQLG ++ + +PT + + V+CG
Sbjct: 219 GRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACG 254
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 21/127 (16%)
Query: 277 HARRPSLISGGELYTWGSNENGCLG--IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
H L + G++Y GSN+ LG + S L PE V + + Q++CG +H+
Sbjct: 45 HRHTLFLTASGKVYACGSNDYAQLGHELSSKRPLQIPELV-----DCVITQIACGSRHSM 99
Query: 335 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNFGENVKALQVSCG 392
A++E G++L+WG + GQLGH +D D + P V + +Q++CG
Sbjct: 100 ALTEWGQVLSWG------------DNECGQLGHASDQDVVQLPKTVRALVSKTVVQIACG 147
Query: 393 FNHTGAL 399
NH+ AL
Sbjct: 148 NNHSLAL 154
>gi|440792839|gb|ELR14047.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 390
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 161/374 (43%), Gaps = 70/374 (18%)
Query: 41 ALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA--LACGGAHTLFLTETGCVYATGLN 98
+L G G GRLG G P + + K +KA + CG H++ ++ G VY G
Sbjct: 69 SLGGLGSTGRLGHGDERKYRDPTLVQSLHKQGIKAKSVVCGYFHSMVISSKGQVYTCGRG 128
Query: 99 DFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G LG NI L ++ LK V Q+ +HS +T DG++Y +G +G+LG
Sbjct: 129 YKGFLGHKNQNNIRSFLLVDALASLK--VTQVCAARNHSLVVTSDGQVYSFGFPKHGRLG 186
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G A + +PT +E L G Q + +T G+V WG+G G+LG G
Sbjct: 187 HGDDAYRR--LPTMIEGLRGKKVVQTTCFGAHNAVLTDAGQVFMWGSGTDGKLGQGDNE- 243
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S + P L++ LEG +K G+ +A I+ G ++ +G ++ +
Sbjct: 244 --------SHFAPVLVRALEGKGIKSIQCGYDFAAAINVEGHLFTWGHGLGGRLGHGDEE 295
Query: 277 HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 336
+ PSL++ +E P+ ++CG H AAI
Sbjct: 296 NRTVPSLVTA-------------------------------LAEVPIRAIACGAGHMAAI 324
Query: 337 SEGKIL-TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV---------NFGENVKA 386
S+ +L TW G ++ GQLGHG+ D PT+V + +
Sbjct: 325 SDMNVLYTW------------GKNAEGQLGHGDRHDRHGPTVVATLLLAPSEDAPPRGRV 372
Query: 387 LQVSCGFNHTGALL 400
+VSCG NHT +L+
Sbjct: 373 AKVSCGANHTASLV 386
>gi|42563438|ref|NP_186900.3| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
gi|110735845|dbj|BAE99899.1| hypothetical protein [Arabidopsis thaliana]
gi|332640299|gb|AEE73820.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
Length = 393
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 151/365 (41%), Gaps = 65/365 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LG+G+ E + V A E +S++++ G ++L + + G ++ G N G
Sbjct: 10 WGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGT 69
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
LG P R+ L ++ Q + G H A+ G Y WG N GQ G
Sbjct: 70 LGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLK 129
Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
+G+ + I IP + C + +Q A G SV +T G V +WG +
Sbjct: 130 DEMGRPVRRDIVIPKR--CAPKLTVRQVAAGGTHSVVLTREGHVWTWG-----------Q 176
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
G ++ S P ++ LE V++ A G H+ ++E+GR
Sbjct: 177 PWPPGDIKQIS--VPVRVQGLE--NVRLIAVGAFHNLALEEDGR---------------- 216
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
L WG+NE G LG G P VQG + VD + GW TA
Sbjct: 217 --------------LLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTA 262
Query: 335 AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
+G++ WG G HG LG + + P VN +QVSCG
Sbjct: 263 LTDKGEVYGWG-RGEHGRLG---------LGDNDKSSKMVPQKVNLLAEEDIIQVSCGGT 312
Query: 395 HTGAL 399
H+ AL
Sbjct: 313 HSVAL 317
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 136/312 (43%), Gaps = 45/312 (14%)
Query: 40 AALWGNGDYGRLGLGSLESRW-RPVVCSAF------EKHSLKALACGGAHTLFLTETGCV 92
A WG +YG+ G L+ RPV K +++ +A GG H++ LT G V
Sbjct: 112 AYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHV 171
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
+ +GQ +I P+R+ GL+ V I+ G H+ A+ DG L WG N
Sbjct: 172 WT-----WGQPWPPGDIKQISVPVRVQGLEN-VRLIAVGAFHNLALEEDGRLLAWGNNEY 225
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG G P+P V+ L + A G S A+T G+V WG G GRLG
Sbjct: 226 GQLGTGDTQPTSHPVP--VQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLG-- 281
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
LG +S+ P+ + L + + G HS + +GR++ FG
Sbjct: 282 -----LGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFG--------- 327
Query: 273 QEGNHARRPSLISGGELYTWGSNENGCLGI----GSIDVLHSPERVQGPFSESPVDQVSC 328
G+H R + G T G + I GS + H+ E +G +S ++C
Sbjct: 328 -RGDHGR----LGYGRKVTTGQPLELPIKIPPPEGSFN--HTDEEEEGKWS---AKSIAC 377
Query: 329 GWKHTAAISEGK 340
G +HT AI E K
Sbjct: 378 GGRHTLAIVEWK 389
>gi|449665602|ref|XP_002165309.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Hydra magnipapillata]
Length = 731
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 133/303 (43%), Gaps = 75/303 (24%)
Query: 43 WGNGDYGRLGLGSLESRWR--------PVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
WG Y +LG +L+ + P ++ + CG HTLFL+ G VYA
Sbjct: 6 WGCNAYNQLGFKNLQEKDENEPIDNTFPTPILVNTSFCIEKIICGWNHTLFLS-GGLVYA 64
Query: 95 TGLN-------------------------DFGQLGISENIGYSLEPLRISGLKK-EVVQI 128
+GLN +FGQ+GI+ + P + L ++QI
Sbjct: 65 SGLNYDGELGISNENTEVPDGHVFSWGSNEFGQVGINSKFHKYVSPQLVRDLSNCPIIQI 124
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
G HHS A+T+ G ++ WGKNS GQLGLG + ++ PTK++ ++G + + G E
Sbjct: 125 CAGGHHSLALTISGTIFAWGKNSFGQLGLGDQQDRL--FPTKIQSMNGKHVRYISCGEEH 182
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
SV +T G+V ++G G SG+LGH + ++ P+++ +L G V A G
Sbjct: 183 SVLLTSAGRVYTFGCGSSGQLGHNE---------FEDQFIPKMVVDLMGTPVTQIACGRK 233
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVL 308
H+ ++ G +LY++G N G LGIGS +
Sbjct: 234 HTLA-----------------------------HVMKGNKLYSFGLNVKGQLGIGSYEKA 264
Query: 309 HSP 311
P
Sbjct: 265 RIP 267
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGLG + R P + ++ ++CG H++ LT G VY G GQ
Sbjct: 143 WGKNSFGQLGLGDQQDRLFPTKIQSMNGKHVRYISCGEEHSVLLTSAGRVYTFGCGSSGQ 202
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKKA 161
LG +E + + + + V QI+ G H+ A + G +LY +G N GQLG+G
Sbjct: 203 LGHNEFEDQFIPKMVVDLMGTPVTQIACGRKHTLAHVMKGNKLYSFGLNVKGQLGIGSYE 262
Query: 162 AKVIPIPT 169
IP+ T
Sbjct: 263 KARIPMLT 270
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 104/286 (36%), Gaps = 82/286 (28%)
Query: 144 LYMWGKNSNGQLGLGKKAAK--------VIPIPT---------KVEC-------LSGIFT 179
+Y WG N+ QLG K P P K+ C LSG
Sbjct: 3 MYSWGCNAYNQLGFKNLQEKDENEPIDNTFPTPILVNTSFCIEKIICGWNHTLFLSGGLV 62
Query: 180 KQAALGFEQSVAVTG------GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
+ L ++ + ++ G V SWG+ G++G + F + S P+L++
Sbjct: 63 YASGLNYDGELGISNENTEVPDGHVFSWGSNEFGQVGINSK-----FHKYVS---PQLVR 114
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWG 293
+L + AG HS +L G ++ WG
Sbjct: 115 DLSNCPIIQICAGGHHSL------------------------------ALTISGTIFAWG 144
Query: 294 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGT 352
N G LG+G P ++Q + V +SCG +H+ + S G++ T+G G S
Sbjct: 145 KNSFGQLGLGDQQDRLFPTKIQS-MNGKHVRYISCGEEHSVLLTSAGRVYTFGCGSS--- 200
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
GQLGH D P +V Q++CG HT A
Sbjct: 201 ---------GQLGHNEFEDQFIPKMVVDLMGTPVTQIACGRKHTLA 237
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 15/118 (12%)
Query: 284 ISGGELYTWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKI 341
+ G +++WGSNE G +GI S SP+ V+ S P+ Q+ G H+ A++ G I
Sbjct: 82 VPDGHVFSWGSNEFGQVGINSKFHKYVSPQLVRD-LSNCPIIQICAGGHHSLALTISGTI 140
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
WG +S GQLG G+ D + PT + +SCG H+ L
Sbjct: 141 FAWG------------KNSFGQLGLGDQQDRLFPTKIQSMNGKHVRYISCGEEHSVLL 186
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 23/133 (17%)
Query: 289 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV--------DQVSCGWKHTAAISEGK 340
+Y+WG N LG ++ E + F +P+ +++ CGW HT +S G
Sbjct: 3 MYSWGCNAYNQLGFKNLQEKDENEPIDNTFP-TPILVNTSFCIEKIICGWNHTLFLSGGL 61
Query: 341 ILTWG--WGGSHGTFSE-----DGH------SSGGQLGHGNDV-DYIHPTIVNFGENVKA 386
+ G + G G +E DGH + GQ+G + Y+ P +V N
Sbjct: 62 VYASGLNYDGELGISNENTEVPDGHVFSWGSNEFGQVGINSKFHKYVSPQLVRDLSNCPI 121
Query: 387 LQVSCGFNHTGAL 399
+Q+ G +H+ AL
Sbjct: 122 IQICAGGHHSLAL 134
>gi|156740286|ref|YP_001430415.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
DSM 13941]
gi|156231614|gb|ABU56397.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
DSM 13941]
Length = 792
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 151/352 (42%), Gaps = 53/352 (15%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
+ A+A GGAHT LT +G V G N FGQLG S P+ +SGL V I+ GY
Sbjct: 69 VTAIAAGGAHTCALTSSGGVMCWGRNGFGQLGDGTTTDRS-TPVAVSGLTSGVTAIAAGY 127
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
H+ A+ G + WG N +GQLG G + P+ V L+ T AA G + + A
Sbjct: 128 AHTCALMSSGGVMCWGDNWSGQLGDGTTTDRSTPV--AVSGLASGVTAIAA-GDDHTCAR 184
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G V+ WG SG+LG G +T TP + L G V AAG H+
Sbjct: 185 TSSGGVMCWGDNWSGQLGDGT---------TTDRSTPVAVSGL-GSGVTAIAAGGSHTCA 234
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG---------------------GELYT 291
+ +G V+ +GD ++ P +SG G +
Sbjct: 235 LMSSGGVWCWGDNWSGQLGDGTTTDRSTPVAVSGLASGVTAIAAGGFHTCARTSSGGVMC 294
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 350
WG+N +G LG G+ +P V G S V ++ G HT A+ S G + WG +
Sbjct: 295 WGANWSGQLGDGTTTARSTPVAVSGL--ASGVTAIAAGDSHTCALTSSGGVWCWG----Y 348
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVN-FGENVKALQVSCGFNHTGALLE 401
F GQLG G D P V+ G V A+ G HT AL+
Sbjct: 349 NFF--------GQLGDGTTTDRSTPVAVSGLGSGVTAIAA--GDFHTCALMS 390
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 165/385 (42%), Gaps = 60/385 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R PV S + A+A G +HT LT +G V+ G N FGQ
Sbjct: 295 WGANWSGQLGDGTTTARSTPVAVSGLAS-GVTAIAAGDSHTCALTSSGGVWCWGYNFFGQ 353
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ +SGL V I+ G H+ A+ G + WG+N +GQLG G
Sbjct: 354 LGDGTTTDRS-TPVAVSGLGSGVTAIAAGDFHTCALMSSGGVRCWGRNKDGQLGDGTTTT 412
Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P+ +SG+ + A+ G + + A T G V+ WG SG+LG G
Sbjct: 413 RSTPVA-----VSGLVSGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGT------- 460
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T TP + L G V AAG H+ + +G V+ +G + ++ +G R
Sbjct: 461 --TTDRSTPVAVSGL-GSGVTAIAAGGSHTCALMSSGGVWCWGRNSSGQL--GDGTTTDR 515
Query: 281 ---------PS--------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
PS L S G + WG+N +G LG G+ +P V G
Sbjct: 516 GTPVAVSGLPSEVTAIASGGVHTCALTSSGGVMCWGANWSGQLGDGTTTARSTPVAVSGL 575
Query: 318 FSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 376
S V ++ G HT A+ S G + W G +S GQLG G P
Sbjct: 576 --PSGVMAIAAGDLHTCALTSSGGVWCW------------GANSSGQLGDGTTTARSTPV 621
Query: 377 IVNFGENVKALQVSCGFNHTGALLE 401
V+ G ++ G HT AL
Sbjct: 622 AVS-GLPSGVTAIAAGSFHTCALTS 645
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 136/326 (41%), Gaps = 60/326 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV S + A+A GG HT LT +G V G N GQ
Sbjct: 499 WGRNSSGQLGDGTTTDRGTPVAVSGLPSE-VTAIASGGVHTCALTSSGGVMCWGANWSGQ 557
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ +SGL V+ I+ G H+ A+T G ++ WG NS+GQLG G A
Sbjct: 558 LGDGTTTARS-TPVAVSGLPSGVMAIAAGDLHTCALTSSGGVWCWGANSSGQLGDGTTTA 616
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L T AA F + A+T G V WGA SG+LG G
Sbjct: 617 RSTPV--AVSGLPSGVTAIAAGSF-HTCALTSSGGVWCWGANWSGQLGDGSY-------- 665
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T TP + L V AAG H+ AR S
Sbjct: 666 -TDSSTPVAVSGLP-SGVTAIAAGRFHTC--------------------------ARTGS 697
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA-ISEGKI 341
G ++ W SN G LG GS +P V G S V ++ G HT A S G +
Sbjct: 698 ----GGVWCWASNRYGQLGDGSYTDSSTPVAVSGLVSG--VTAIAAGVVHTCARTSSGGV 751
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHG 367
+ W G +S GQLG G
Sbjct: 752 MCW------------GANSSGQLGDG 765
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 155/361 (42%), Gaps = 55/361 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R PV S + A+A G HT T +G V G N GQ
Sbjct: 397 WGRNKDGQLGDGTTTTRSTPVAVSGLVS-GVTAIAAGDDHTCARTSSGGVMCWGDNWSGQ 455
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ +SGL V I+ G H+ A+ G ++ WG+NS+GQLG G
Sbjct: 456 LGDGTTTDRS-TPVAVSGLGSGVTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTD 514
Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P+ +SG+ ++ A+ G + A+T G V+ WGA SG+LG G
Sbjct: 515 RGTPVA-----VSGLPSEVTAIASGGVHTCALTSSGGVMCWGANWSGQLGDGT------- 562
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T+ TP + L + I AAG LH+ + +G V+ +G + ++
Sbjct: 563 --TTARSTPVAVSGLPSGVMAI-AAGDLHTCALTSSGGVWCWGANSSGQLGDGTTTARST 619
Query: 281 PSLISG---------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
P +SG G ++ WG+N +G LG GS +P V G
Sbjct: 620 PVAVSGLPSGVTAIAAGSFHTCALTSSGGVWCWGANWSGQLGDGSYTDSSTPVAVSGL-- 677
Query: 320 ESPVDQVSCGWKHTAA-ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
S V ++ G HT A G + W + GQLG G+ D P V
Sbjct: 678 PSGVTAIAAGRFHTCARTGSGGVWCW------------ASNRYGQLGDGSYTDSSTPVAV 725
Query: 379 N 379
+
Sbjct: 726 S 726
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 166/431 (38%), Gaps = 101/431 (23%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ R PV S + A+A G AHT L +G V G N GQ
Sbjct: 91 WGRNGFGQLGDGTTTDRSTPVAVSGLTS-GVTAIAAGYAHTCALMSSGGVMCWGDNWSGQ 149
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ +SGL V I+ G H+ A T G + WG N +GQLG G
Sbjct: 150 LGDGTTTDRS-TPVAVSGLASGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTD 208
Query: 163 KVIPI-------------------------------------------------PTKVEC 173
+ P+ P V
Sbjct: 209 RSTPVAVSGLGSGVTAIAAGGSHTCALMSSGGVWCWGDNWSGQLGDGTTTDRSTPVAVSG 268
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
L+ T AA GF + A T G V+ WGA SG+LG G +T+ TP +
Sbjct: 269 LASGVTAIAAGGF-HTCARTSSGGVMCWGANWSGQLGDGT---------TTARSTPVAVS 318
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRAVDKMLFQEGNHA-- 278
L V AAG H+ + +G V+ +G DR+ + G+
Sbjct: 319 GLA-SGVTAIAAGDSHTCALTSSGGVWCWGYNFFGQLGDGTTTDRSTPVAVSGLGSGVTA 377
Query: 279 ------RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 332
+L+S G + WG N++G LG G+ +P V G S V ++ G H
Sbjct: 378 IAAGDFHTCALMSSGGVRCWGRNKDGQLGDGTTTTRSTPVAVSGLVSG--VTAIAAGDDH 435
Query: 333 TAA-ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN-FGENVKALQVS 390
T A S G ++ WG D S GQLG G D P V+ G V A+
Sbjct: 436 TCARTSSGGVMCWG----------DNWS--GQLGDGTTTDRSTPVAVSGLGSGVTAIAA- 482
Query: 391 CGFNHTGALLE 401
G +HT AL+
Sbjct: 483 -GGSHTCALMS 492
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS PV S + A+A G HT T +G V+ N +GQ
Sbjct: 652 WGANWSGQLGDGSYTDSSTPVAVSGLPS-GVTAIAAGRFHTCARTGSGGVWCWASNRYGQ 710
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S P+ +SGL V I+ G H+ A T G + WG NS+GQLG G+
Sbjct: 711 LGDGSYTDSS-TPVAVSGLVSGVTAIAAGVVHTCARTSSGGVMCWGANSSGQLGDGR 766
>gi|444729790|gb|ELW70194.1| putative E3 ubiquitin-protein ligase HERC6 [Tupaia chinensis]
Length = 1378
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 140/296 (47%), Gaps = 52/296 (17%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P AFE + ++CG H+L + G V+A G GQLGI E S P +I
Sbjct: 87 KPEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERSFTPQKIKA 146
Query: 121 LK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L +++Q+S GY+HS A++ DG+++ WGKNS+GQLGLGK+ P +V L GI
Sbjct: 147 LAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQTS-PQRVRSLEGIPL 205
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G WG+ +G+L ++ G Y P + L+ +
Sbjct: 206 AQVAAGGAHSFALSLSGTSFGWGSNSAGQL------ALSGTKAPVQRYKPLSVGALKTLG 259
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
V + G H+A + +NG V YT+G+N +G
Sbjct: 260 VVYISCGSEHTAVLTQNGAV------------------------------YTFGANSSGQ 289
Query: 300 LGIGSIDVLHSPERVQGPFSESPVD----QVSCGWKHTAA--ISEGKILTWGWGGS 349
LG HS E+ +GP +D Q+ CG HT A + G+++++G G S
Sbjct: 290 LG-------HSAEQ-RGPQCVERIDGLVSQIDCGSYHTLAYVYTTGQVVSFGHGPS 337
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 113/237 (47%), Gaps = 30/237 (12%)
Query: 37 RRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA--------CGGAHTLFLTE 88
R FA WG G G+LG+G + R +F +KALA CG H+L L+E
Sbjct: 117 RVFA--WGAGSEGQLGIGEFKER-------SFTPQKIKALAGIKIIQVSCGYYHSLALSE 167
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMW 147
G V++ G N GQLG+ + + P R+ L+ + Q++ G HS A+++ G + W
Sbjct: 168 DGQVFSWGKNSHGQLGLGKEVPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGW 227
Query: 148 GKNSNGQLGL-GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
G NS GQL L G KA P V L + + G E + +T G V ++GA S
Sbjct: 228 GSNSAGQLALSGTKAPVQRYKPLSVGALKTLGVVYISCGSEHTAVLTQNGAVYTFGANSS 287
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH E + P+ ++ ++G+ +I + A + G+V FG
Sbjct: 288 GQLGHSAE-----------QRGPQCVERIDGLVSQIDCGSYHTLAYVYTTGQVVSFG 333
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 86/176 (48%), Gaps = 13/176 (7%)
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWG 148
G ++A G N GQLG+ S P + L +VQIS G HS A+++ G +Y WG
Sbjct: 913 GELFAWGQNSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSWG 972
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
KN GQLGLG +K P+ + L A G + +T G V ++GAG G+
Sbjct: 973 KNDFGQLGLGHTESK--DSPSLLRALDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYGQ 1030
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
LGH + E P L+ EL G +V A G H+ A + E G+V+ FG
Sbjct: 1031 LGHSS---------TRDELRPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFG 1077
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 87/183 (47%), Gaps = 33/183 (18%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
GEL+ WG+NS+GQLGLG+ P P VE L+G+ Q + G S+A++ G V SW
Sbjct: 913 GELFAWGQNSHGQLGLGRIFPSS-PTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSW 971
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G+LG G + S+ +P L++ L+ KV A G H+A + ++G V+
Sbjct: 972 GKNDFGQLGLGH---------TESKDSPSLLRALDSQKVDFLACGGSHTALLTQDGLVFT 1022
Query: 262 FGDRAVDKMLFQEGNHARRPSLISG-----------------------GELYTWGSNENG 298
FG ++ RP L++ G+++ +GS +NG
Sbjct: 1023 FGAGKYGQLGHSSTRDELRPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFGSGKNG 1082
Query: 299 CLG 301
LG
Sbjct: 1083 QLG 1085
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D+G+LGLG ES+ P + A + + LACGG+HT LT+ G V+ G +GQ
Sbjct: 971 WGKNDFGQLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYGQ 1030
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLG 156
LG S L P ++ L V QI+ G H+ A + G+++ +G NGQLG
Sbjct: 1031 LGHSSTRD-ELRPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFGSGKNGQLG 1085
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 93/186 (50%), Gaps = 8/186 (4%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG + S P + L ++ G AH++ L+ TG VY+ G NDFG
Sbjct: 918 WGQNSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSWGKNDFG 977
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+ L + ++V ++ G H++ +T DG ++ +G GQLG
Sbjct: 978 QLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYGQLGHSSTR 1037
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLG----HGQESS 216
++ P V L G Q A G ++A V+ GKV ++G+G +G+LG H Q +S
Sbjct: 1038 DEL--RPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFGSGKNGQLGNCGTHNQPNS 1095
Query: 217 ILGFLR 222
+ R
Sbjct: 1096 YVNLRR 1101
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 90/206 (43%), Gaps = 52/206 (25%)
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G++ +WG G+LG LG + +S TP++++ L GV + +AG HS +
Sbjct: 913 GELFAWGQNSHGQLG-------LGRIFPSSP-TPQIVEHLAGVPLVQISAGEAHSMALSM 964
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G VY +WG N+ G LG+G + SP ++
Sbjct: 965 TGNVY------------------------------SWGKNDFGQLGLGHTESKDSPSLLR 994
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
S+ VD ++CG HTA +++ G + T+G G GQLGH + D +
Sbjct: 995 ALDSQK-VDFLACGGSHTALLTQDGLVFTFGAGKY------------GQLGHSSTRDELR 1041
Query: 375 PTIVNFGENVKALQVSCGFNHTGALL 400
P +V + Q++CG HT A +
Sbjct: 1042 PCLVTELLGNRVTQIACGRWHTLAYV 1067
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 13/116 (11%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 345
GEL+ WG N +G LG+G I ++ + P+ Q+S G H+ A+S G + +W
Sbjct: 913 GELFAWGQNSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSW- 971
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G + GQLG G+ P+++ ++ K ++CG +HT L +
Sbjct: 972 -----------GKNDFGQLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQ 1016
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 15/93 (16%)
Query: 311 PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 369
PE++Q F VD VSCG +H+ A+ +G++ WG G S GQLG G
Sbjct: 88 PEQIQA-FETLRVDLVSCGKEHSLAVCHKGRVFAWGAG------------SEGQLGIGEF 134
Query: 370 VDY-IHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ P + +K +QVSCG+ H+ AL E
Sbjct: 135 KERSFTPQKIKALAGIKIIQVSCGYYHSLALSE 167
>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
Length = 1183
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 138/301 (45%), Gaps = 46/301 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 412 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 471
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 472 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 529
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 530 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 586
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 587 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 617
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 618 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 668
Query: 340 K 340
K
Sbjct: 669 K 669
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 306 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 363
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 364 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 421
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 422 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 476
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 477 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 530
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 531 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 590
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 591 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 637
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 638 IQRPRLVAALQGKKVNRVACGSAHTLA 664
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 301 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 358
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 359 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 401
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 402 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 441
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 442 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 488
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 489 LQGHRVIDIACG 500
>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
Length = 958
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 334 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 393
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 394 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 451
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 452 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 508
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 509 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 539
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 540 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 590
Query: 340 KILTWG 345
K + G
Sbjct: 591 KPASAG 596
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 166/386 (43%), Gaps = 57/386 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P C A L GG TLF +T G +YATG G
Sbjct: 228 WGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLI-GGEQTLFAVTADGKLYATGYGAGG 286
Query: 102 QLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 287 RLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 344
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 345 GNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD---- 398
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 399 -----SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 453
Query: 276 NHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + P +L G +YTWG + LG GS D + P +
Sbjct: 454 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 513
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 514 VQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNAI 560
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 561 QRPRLVAALQGKKVNRVACGSAHTLA 586
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 223 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 280
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 281 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 323
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 324 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 363
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 364 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 410
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 411 LQGHRVIDIACG 422
>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
Length = 1082
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 312 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 371
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 372 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 429
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 430 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 486
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 487 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 517
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 518 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 568
Query: 340 KILTWG 345
K + G
Sbjct: 569 KPASAG 574
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 206 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 263
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 264 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 321
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 322 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 376
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 377 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 430
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 431 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 490
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 491 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 537
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 538 IQRPRLVAALQGKKVNRVACGSAHTLA 564
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 201 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 258
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 259 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 301
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 302 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 341
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 342 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 388
Query: 381 GENVKALQVSCG 392
+ + + V+CG
Sbjct: 389 LQGHRVVDVACG 400
>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101226798 [Cucumis sativus]
Length = 1103
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 166/374 (44%), Gaps = 72/374 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + A +++ +ACG HT +T +G +Y G +
Sbjct: 332 WGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNS 391
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG +++ + + P R++G + + IS G H++ +T G+L+ +G + G LG G
Sbjct: 392 GLLGHGKDVSHWV-PKRVTGPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHG 450
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + I IP +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 451 DRDS--ISIPREVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDK 508
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L F AC
Sbjct: 509 GRLGHGDKEARL---------VPTCVAAL-------VEPNFCQVAC-------------- 538
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
H+ +L + G +YT GS G LG D P RV+G S+S V+++
Sbjct: 539 ---------GHSLTVALTNSGHIYTMGSPVYGQLGNPQADG-KLPARVEGKLSKSFVEEL 588
Query: 327 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 385
+CG H A + S ++ TWG G + G+LGHG+ D PT+V ++ +
Sbjct: 589 ACGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGSTDDRNTPTLVEALKDKQ 636
Query: 386 ALQVSCGFNHTGAL 399
++CG N T A+
Sbjct: 637 VKSIACGTNFTAAI 650
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 106/239 (44%), Gaps = 52/239 (21%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + + A G + VT G+V SWG GRLGHG +S
Sbjct: 298 LPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDA--------- 348
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
+ P+LI L + +++ A G H+ + +G +Y +GD
Sbjct: 349 HHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGD---------------------- 386
Query: 287 GELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTW 344
G+ +G LG G DV H P+RV GP + +SCG HTA + S GK+ T+
Sbjct: 387 ------GTYNSGLLGHGK-DVSHWVPKRVTGPLQGLHISSISCGPWHTALVTSAGKLFTF 439
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
G GTF G LGHG+ P V + ++ ++ +CG HT A++E +
Sbjct: 440 G----DGTF--------GVLGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAVVEVI 486
>gi|195999218|ref|XP_002109477.1| hypothetical protein TRIADDRAFT_21647 [Trichoplax adhaerens]
gi|190587601|gb|EDV27643.1| hypothetical protein TRIADDRAFT_21647, partial [Trichoplax
adhaerens]
Length = 330
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 104/322 (32%), Positives = 145/322 (45%), Gaps = 41/322 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFL--TETGCVYATGLNDF 100
WG+G G LG G P V A +++K LACG HT+F E G VY+ GL +
Sbjct: 4 WGSGINGALGHGEDIDIPSPRVVEALLAYNIKRLACG-LHTVFALNAEDGKVYSWGLGKY 62
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITV---DGELYMWGKNSNGQLG 156
G LG N+ PL+I+ K V+ IS H++A+T G +Y +G NSN QLG
Sbjct: 63 GILG-QGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSNSQLG 121
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+G + P V L+ + A G S A++ G + WG G G+LG
Sbjct: 122 VGD--TEPYAEPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGLGDDGQLG------ 173
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
LG ++E T I E + KV A G LH+ + G VY FG ++ N
Sbjct: 174 -LGNYNLSTEPTILHIGE-KKAKVMDVACGDLHTCILTVGGLVYAFGSNIYGQIAAPSMN 231
Query: 277 HARRPSLIS----------------------GGELYTWGSNENGCLGIGSIDVLHSPERV 314
P IS G+LY WG +G LG+G SP V
Sbjct: 232 KFHLPYRISFNTSKRFVSVSCGSFHSAAITENGKLYAWGLETDGRLGLGDCKQRSSPTEV 291
Query: 315 QGPFSESPVDQVSCGWKHTAAI 336
+G F + + +++CG KHTAA+
Sbjct: 292 EG-FRDKKIGRIACGSKHTAAL 312
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 27 CKRWISSTLQRR-FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTL 84
C ++ S+ L + LWG GD G+LGLG+ P + EK + + +ACG HT
Sbjct: 147 CGKYHSAALSAKGNLFLWGLGDDGQLGLGNYNLSTEPTILHIGEKKAKVMDVACGDLHTC 206
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGE 143
LT G VYA G N +GQ+ + L P RIS K V +S G HS+AIT +G+
Sbjct: 207 ILTVGGLVYAFGSNIYGQIAAPSMNKFHL-PYRISFNTSKRFVSVSCGSFHSAAITENGK 265
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
LY WG ++G+LGLG K PT+VE
Sbjct: 266 LYAWGLETDGRLGLGD--CKQRSSPTEVE 292
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 115/284 (40%), Gaps = 48/284 (16%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG-GGKVLSWG 202
+Y WG NG LG G+ IP P VE L K+ A G A+ GKV SWG
Sbjct: 1 VYTWGSGINGALGHGEDID--IPSPRVVEALLAYNIKRLACGLHTVFALNAEDGKVYSWG 58
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID---ENGRV 259
G G LG G LRS + P I + V + LH+A + G V
Sbjct: 59 LGKYGILGQGN-------LRS--RFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSV 109
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLIS----------------------GGELYTWGSNEN 297
Y FGD + ++ + P L++ G L+ WG ++
Sbjct: 110 YSFGDNSNSQLGVGDTEPYAEPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGLGDD 169
Query: 298 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 357
G LG+G+ ++ P + ++ V V+CG HT ILT G G G
Sbjct: 170 GQLGLGNYNLSTEPTILHIGEKKAKVMDVACGDLHTC------ILTVG-----GLVYAFG 218
Query: 358 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ GQ+ + + P ++F + + + VSCG H+ A+ E
Sbjct: 219 SNIYGQIAAPSMNKFHLPYRISFNTSKRFVSVSCGSFHSAAITE 262
>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Loxodonta africana]
Length = 4838
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4067 WGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4126
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4127 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4184
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4185 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4241
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4242 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4272
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4273 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4323
Query: 340 KILTWG 345
K + G
Sbjct: 4324 KPTSTG 4329
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3073 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3132
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3133 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3190
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3191 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3247
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH C+
Sbjct: 3248 -------RKPQVVEGLRGKKIVHVAVGALH--CL-------------------------- 3272
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
++ G++Y WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3273 --AVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3325
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3961 WGHNHRGQLGGIEGAKVKVPTPCEALA--ALRPVQLIGGEQTLFAVTADGKLYATGYGAG 4018
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4019 GRLGIGGTESVSTPTLLESVQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4076
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P VE L GI A G S VT G + +WG G GRLGH
Sbjct: 4077 HGNRSP--CDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4131
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4132 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4185
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4186 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4245
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4246 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4292
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4293 IQRPRLVAALQGKKVNRVACGSAHTLA 4319
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3001 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3060
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3061 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3118
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3119 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3169
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3170 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3229
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3230 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG---- 3284
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3285 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3325
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 133/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G +VIP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEVIPV--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPSALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 119/231 (51%), Gaps = 25/231 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQL--GISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSN 152
++G+L G SE+ + P+ ++GLK +V+ ++ +G + A+T +G+++ WG
Sbjct: 579 GNYGRLGHGSSED---EVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
G+LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG
Sbjct: 636 GKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
E + P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 694 TEEHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 149/353 (42%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ +G VY N +L P + GL
Sbjct: 443 PIQCEGLASLGVTQIACAEKRFLILSRSGRVYTQAYN-----------SDALAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +++I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEVIP 595
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV A G GD A+ ++ G++
Sbjct: 596 VLVAGLKGLKVIDVACGS---------------GD-------------AQTLAVTENGQV 627
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG G
Sbjct: 628 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 686
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 687 NQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E PV+ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 116/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2955 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3012
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G L S + PR I L VK A +HS
Sbjct: 3013 GKVYACGEATNGRLGLG--------LSSGTVPIPRQITALSSYVVKKVA---VHSG---- 3057
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3058 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3096
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AAI S G++ TWG G G+LGHG++ +
Sbjct: 3097 A-LKTKRIRDIACGSSHSAAITSSGELYTWGLG------------EYGRLGHGDNTTQLK 3143
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3144 PKMVKVLLGHRVIQVACGSRDAQTL 3168
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3956 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 4013
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4014 GYGAGGRLGIGGTESV---------STPTLLESVQHVFIKKVAVNSGGKHCL-------- 4056
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P V+
Sbjct: 4057 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIE 4096
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4097 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4143
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 4144 LQGHRVVDIACG 4155
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 1473
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 162/380 (42%), Gaps = 56/380 (14%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G+LG R P E + ++ G AH+L L G V+ G N G
Sbjct: 90 WGGNSAGQLGGADTSFQRLSPARLPVLED--IVSVVSGDAHSLALGADGTVWTWGSNSSG 147
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG + EP R+ G +VV ++ G HS + DG ++ WG N +GQLG G
Sbjct: 148 QLGDGTTTDRA-EPQRVEGF-TDVVAVAAGDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQ 205
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P P V L G+ A GF+ ++AV G V SWGA G+LG G
Sbjct: 206 TGLWPKP--VPGLEGVVALAA--GFDFTLAVHADGAVSSWGANSFGQLGLGT-------- 253
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRAVD 268
T +P I L G+ AAG H+ + ++G V+ +G DRAV
Sbjct: 254 -FTQRLSPERIPTLSGITS--VAAGTYHAVALGKDGTVWTWGSNSSGQLGDGTWNDRAVP 310
Query: 269 KMLFQEGN-------HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
L G A +L+ GG++ WG+N +G LG G +P V S
Sbjct: 311 APLPGVGGARAVASLDAGSLALLEGGDVLAWGANNSGQLGDGDTADRSTPSLVP---ELS 367
Query: 322 PVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
V V G +H A+ + L W WGG GQLGHG ++ P V
Sbjct: 368 AVTAVVGGAQHALALRKDGTL-WAWGGGL----------AGQLGHGGSERHVVPATVMGL 416
Query: 382 ENVKALQVSCGFNHTGALLE 401
NV ++ + G H+ A LE
Sbjct: 417 TNVTSM--ATGSFHSLAALE 434
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 146/328 (44%), Gaps = 51/328 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGLG+ RPV + ++ LA G AH L + G V A G N GQ
Sbjct: 741 WGYNRFGQLGLGAAGWSARPVQVRGIGR--VERLAAGRAHALLVRADGSVVAWGANASGQ 798
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + + G+ +++G HS + DG ++ WG+N GQLG G +A
Sbjct: 799 LGDGGTT-HGARAVTVRGVSC-ARSVASGGQHSLVLACDGTVWTWGENQRGQLGDGTTSA 856
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+V P +VE L GI A G + S+A+ G V +WGA SG++G G L
Sbjct: 857 RV--APGRVEGLEGIVA--VAGGGDTSLALRSDGTVWAWGANASGQVGDGTVEDRL---- 908
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
TPR I+ L V + A G H+ + E+G V+ +G A ++ G+ PS
Sbjct: 909 -----TPRRIEALS--DVMVIALGESHALAVGEDGTVWAWGANASGQL----GDGGETPS 957
Query: 283 LISG------------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
L+ G + WG+NE+G LG GS P RV
Sbjct: 958 LLPARVKGLEGVGSVAAGRAFSLAVRDDGTAWAWGANESGQLGDGSNQSRRVPHRVA--- 1014
Query: 319 SESPVDQVSCGWKHTAAISE-GKILTWG 345
S + VS G H A+ E G + WG
Sbjct: 1015 SVKGLRAVSAGAHHAMALGEDGAVWAWG 1042
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 157/386 (40%), Gaps = 55/386 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +YG+LG G R P V + ++ + G H + L G + A G N
Sbjct: 1092 WGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMADGTLQAWGDNAT 1151
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQLG S P I G+ + V +STG HS A+ +DG ++ WG N GQLG G
Sbjct: 1152 GQLGDGTTTRRS-SPGEIRGVTR-VTAVSTGAWHSLALRLDGTVWAWGANGFGQLGDGTT 1209
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A+ +P+P V+ L + A G SVAV G V +WG G+LG G
Sbjct: 1210 TARAVPVP--VQGLRDVVAIAA--GGYHSVAVRSDGTVWTWGYNTFGQLGDGT------- 1258
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA-------------- 266
S S P + +LEGV+ G HS + +G V +G A
Sbjct: 1259 --SESRALPVQVHKLEGVQA--VTGGDHHSLALHADGTVSGWGHNASGQLGDGSRTDRYT 1314
Query: 267 ------VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
VD + A +L G ++TWG N +G LG G V GP
Sbjct: 1315 PVRLKDVDGLTEVRAGAAHTVALGKDGTVWTWGDNAHGQLGDG----------VTGPRMR 1364
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VS G AI G ++ G G F+ G +S GQLG G++ P +
Sbjct: 1365 LVPKPVS-GLPAATAIGAGAWHSFASGPEEGAFTW-GRNSHGQLGVGDNAPRAEPQRMKL 1422
Query: 381 GENVKAL----QVSCGFNHTGALLEY 402
+K + S G L+ +
Sbjct: 1423 LSGLKVIAGGADTSLAMTQEGVLMSW 1448
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 170/383 (44%), Gaps = 62/383 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G P E + ++A G A +L + + G +A G N+ GQ
Sbjct: 941 WGANASGQLGDGGETPSLLPARVKGLE--GVGSVAAGRAFSLAVRDDGTAWAWGANESGQ 998
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG N + P R++ +K + +S G HH+ A+ DG ++ WG N+ GQLG G A
Sbjct: 999 LGDGSNQSRRV-PHRVASVKG-LRAVSAGAHHAMALGEDGAVWAWGDNTLGQLGDGTSAF 1056
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
V+ P +V LS + + A G + SVAV G SWG+ G+LG G+ L
Sbjct: 1057 TVM-WPQRVAELSDV--ESVAAGEQFSVAVAHDGTAFSWGSNEYGQLGDGKTGPRL---- 1109
Query: 223 STSEYTPRLIKELEGVKVKIAA---AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+P +K + G K + A H+ + +G + +GD A ++ +G R
Sbjct: 1110 -----SPAEVK-IGGSKARTVVTVGAWGQHAVALMADGTLQAWGDNATGQL--GDGTTTR 1161
Query: 280 R--PSLISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
R P I G G ++ WG+N G LG G+ P VQG
Sbjct: 1162 RSSPGEIRGVTRVTAVSTGAWHSLALRLDGTVWAWGANGFGQLGDGTTTARAVPVPVQG- 1220
Query: 318 FSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 376
V ++ G H+ A+ S+G + TWG + TF GQLG G P
Sbjct: 1221 --LRDVVAIAAGGYHSVAVRSDGTVWTWG----YNTF--------GQLGDGTSESRALPV 1266
Query: 377 IVNFGENVKALQVSCGFNHTGAL 399
V+ E V+A V+ G +H+ AL
Sbjct: 1267 QVHKLEGVQA--VTGGDHHSLAL 1287
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 155/354 (43%), Gaps = 67/354 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G+L SR P V ++AL G H L L + G N FGQ
Sbjct: 691 WGSNGYGQLGDGTLTSRVLPSVIPGLS--GIQALHPGHLHVLALHADKTLRGWGYNRFGQ 748
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG--KK 160
LG+ G+S P+++ G+ + V +++ G H+ + DG + WG N++GQLG G
Sbjct: 749 LGLGA-AGWSARPVQVRGIGR-VERLAAGRAHALLVRADGSVVAWGANASGQLGDGGTTH 806
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A+ + + V C + A G + S+ + G V +WG G+LG G S+
Sbjct: 807 GARAVTV-RGVSC-----ARSVASGGQHSLVLACDGTVWTWGENQRGQLGDGTTSA---- 856
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P ++ LEG+ V +A G D L
Sbjct: 857 -----RVAPGRVEGLEGI-VAVAGGG---------------------DTSL--------- 880
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
+L S G ++ WG+N +G +G G+++ +P R++ + S V ++ G H A+ E
Sbjct: 881 -ALRSDGTVWAWGANASGQVGDGTVEDRLTPRRIE---ALSDVMVIALGESHALAVGEDG 936
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
+ W WG + + GQLG G + + P V E V ++ F+
Sbjct: 937 TV-WAWGAN----------ASGQLGDGGETPSLLPARVKGLEGVGSVAAGRAFS 979
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 158/377 (41%), Gaps = 55/377 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G R P + E ++ A+ G H L L + G ++A G GQ
Sbjct: 341 WGANNSGQLGDGDTADRSTPSLVP--ELSAVTAVVGGAQHALALRKDGTLWAWGGGLAGQ 398
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + + P + GL V ++TG HS A DG ++ WG+NS GQLG G
Sbjct: 399 LGHGGSERHVV-PATVMGLTN-VTSMATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTE 456
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P+ +V L + + A S+AV G V +WG +G+LG G
Sbjct: 457 RHVPV--RVPGLPSV--RAVAAAGHHSIAVAMDGTVWTWGRNAAGQLGDG---------- 502
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV----DKMLFQEGNHA 278
T+ R + V AAG H + +G V+ +G A+ D +
Sbjct: 503 -TTRDRARPVAVSGLTSVLAIAAGGSHVLALRSDGDVWAWGYNALGQLGDGTSGDKLTPV 561
Query: 279 RRP----------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
R P +L + G ++TWG G LG G SP V+G S
Sbjct: 562 RVPGLAPIQSVAAGTYFSMALANDGTVWTWGEGFEGQLGDGGGVQRLSPVAVKG---LSD 618
Query: 323 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 382
+ +S G H A+ G W W G ++ GQLG G+ +D P V
Sbjct: 619 IRNISVGSAHALAV-RGDGTVWAW----------GDNNEGQLGDGSWMDRFAPVQVRNLT 667
Query: 383 NVKALQVSCGFNHTGAL 399
+ A VS G +H+ AL
Sbjct: 668 GITA--VSGGRSHSLAL 682
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 135/297 (45%), Gaps = 41/297 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ +R PV + A+A GG H++ + G V+ G N FGQ
Sbjct: 1196 WGANGFGQLGDGTTTARAVPVPVQGLRD--VVAIAAGGYHSVAVRSDGTVWTWGYNTFGQ 1253
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + +L P+++ L+ V ++ G HHS A+ DG + WG N++GQLG G +
Sbjct: 1254 LGDGTSESRAL-PVQVHKLEG-VQAVTGGDHHSLALHADGTVSGWGHNASGQLGDGSRTD 1311
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +++ + G+ +A G +VA+ G V +WG G+LG G +
Sbjct: 1312 RYTPV--RLKDVDGLTEVRA--GAAHTVALGKDGTVWTWGDNAHGQLGDGVTGPRM---- 1363
Query: 223 STSEYTPRLI-KELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
RL+ K + G+ A AG HS + +G + ++ +
Sbjct: 1364 -------RLVPKPVSGLPAATAIGAGAWHSFASGPEEGAFTWGRNSHGQLGVGDNAPRAE 1416
Query: 281 PS---LISG-----------------GELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
P L+SG G L +WGS+ +G LG+G + SP RV P
Sbjct: 1417 PQRMKLLSGLKVIAGGADTSLAMTQEGVLMSWGSSLHGTLGLGVLGQRASPGRVLLP 1473
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 163/380 (42%), Gaps = 57/380 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG G R PV ++ ++ G AH L + G V+A G N+ GQ
Sbjct: 591 WGEGFEGQLGDGGGVQRLSPVAVKGLSD--IRNISVGSAHALAVRGDGTVWAWGDNNEGQ 648
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+++ L + +S G HS A+ DG + WG N GQLG G +
Sbjct: 649 LGDGSWM-DRFAPVQVRNLTG-ITAVSGGRSHSLALHADGTVRAWGSNGYGQLGDGTLTS 706
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+V +P+ + LSGI G +A+ + WG G+LG G
Sbjct: 707 RV--LPSVIPGLSGIQALHP--GHLHVLALHADKTLRGWGYNRFGQLGLG---------- 752
Query: 223 STSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ ++ R + ++ G+ +V+ AAG H+ + +G V +G A ++ H R
Sbjct: 753 -AAGWSARPV-QVRGIGRVERLAAGRAHALLVRADGSVVAWGANASGQLGDGGTTHGARA 810
Query: 282 ----------SLISGGE----------LYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
S+ SGG+ ++TWG N+ G LG G+ +P RV+G E
Sbjct: 811 VTVRGVSCARSVASGGQHSLVLACDGTVWTWGENQRGQLGDGTTSARVAPGRVEG--LEG 868
Query: 322 PVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
V G A S+G + W G ++ GQ+G G D + P +
Sbjct: 869 IVAVAGGGDTSLALRSDGTVWAW------------GANASGQVGDGTVEDRLTPRRIEAL 916
Query: 382 ENVKALQVSCGFNHTGALLE 401
+V + ++ G +H A+ E
Sbjct: 917 SDV--MVIALGESHALAVGE 934
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 113/271 (41%), Gaps = 50/271 (18%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
++I+ G HS +T G ++ WG NS GQLG + + + P ++ L I + + G
Sbjct: 69 MRIAAGAQHSLFLTPTGAVWAWGGNSAGQLGGADTSFQRLS-PARLPVLEDIVSVVS--G 125
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
S+A+ G V +WG+ SG+LG G +T P+ ++ V AA
Sbjct: 126 DAHSLALGADGTVWTWGSNSSGQLGDGT---------TTDRAEPQRVEGF--TDVVAVAA 174
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG------------------- 286
G HS + +G V+ +G ++ P + G
Sbjct: 175 GDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQTGLWPKPVPGLEGVVALAAGFDFTLAVHA 234
Query: 287 -GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTW 344
G + +WG+N G LG+G+ SPER+ + S + V+ G H A+ +G + TW
Sbjct: 235 DGAVSSWGANSFGQLGLGTFTQRLSPERIP---TLSGITSVAAGTYHAVALGKDGTVWTW 291
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
G +S GQLG G D P
Sbjct: 292 ------------GSNSSGQLGDGTWNDRAVP 310
>gi|444915470|ref|ZP_21235602.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713401|gb|ELW54301.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 852
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 156/338 (46%), Gaps = 50/338 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG DYG+LG G+ +R PV ++A+A H+L + + G V+A G+N GQ
Sbjct: 164 WGPNDYGQLGDGTTTNRPVPVQVGGLS--GIRAVAASSDHSLAVRDDGTVWAWGINSSGQ 221
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P++++GL + +++ G +S A+ DG ++ WG NS+GQLG G
Sbjct: 222 LG-DGTTNDRLTPVQVAGL-SSIKRVAAGDGYSLAVHGDGTVWAWGINSSGQLGDGTTTD 279
Query: 163 KVIPIPTKVECLSGIFTKQAA----LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P +V+ LS + AA LG +AV G G V +WG GSG+LG G
Sbjct: 280 RL--TPGRVKGLSEVVEVSAAKYSLLGSAHVLAVRGDGTVWAWGNNGSGQLGDGT----- 332
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFL-------HSACIDENGRVYIFGDRAVDKML 271
+T TP + EL+GVK F +S + +G V+ +G + ++
Sbjct: 333 ----TTDRLTPVQVSELDGVKAIAVGNSFPLSNSNGSYSLAVRGDGTVWAWGSNSTGQLG 388
Query: 272 FQEGNHARRPSLISG--------------------GELYTWGSNENGCLGIGSIDVLHSP 311
RP+ ++ G +++WG N NG LG + P
Sbjct: 389 DGTTISRSRPAQVNALSGITAVSASSDHALAMRDDGTVWSWGKNTNGKLGDETTAHRLIP 448
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGG 348
+V G S V V+ G H+ ++ E GK WG+ G
Sbjct: 449 VQVHG---LSGVRSVAAGESHSVSVREDGKAWAWGYRG 483
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 137/307 (44%), Gaps = 54/307 (17%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH 133
A+A G HTL L G V+A G ND+GQLG + P+++ GL + ++
Sbjct: 143 PAVAVGTQHTLLLRPDGTVWAWGPNDYGQLGDGTTTNRPV-PVQVGGLSG-IRAVAASSD 200
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
HS A+ DG ++ WG NS+GQLG G ++ P+ +V LS I K+ A G S+AV
Sbjct: 201 HSLAVRDDGTVWAWGINSSGQLGDGTTNDRLTPV--QVAGLSSI--KRVAAGDGYSLAVH 256
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA-----GFL 248
G G V +WG SG+LG G +T TP +K L V V+++AA G
Sbjct: 257 GDGTVWAWGINSSGQLGDGT---------TTDRLTPGRVKGLSEV-VEVSAAKYSLLGSA 306
Query: 249 HSACIDENGRVYIFGDR---------AVDKML--------------------FQEGNHAR 279
H + +G V+ +G+ D++ N +
Sbjct: 307 HVLAVRGDGTVWAWGNNGSGQLGDGTTTDRLTPVQVSELDGVKAIAVGNSFPLSNSNGSY 366
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SE 338
++ G ++ WGSN G LG G+ P +V + S + VS H A+ +
Sbjct: 367 SLAVRGDGTVWAWGSNSTGQLGDGTTISRSRPAQVN---ALSGITAVSASSDHALAMRDD 423
Query: 339 GKILTWG 345
G + +WG
Sbjct: 424 GTVWSWG 430
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 160/360 (44%), Gaps = 60/360 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---------GAHTLFLTETGCVY 93
WGN G+LG G+ R PV S E +KA+A G G+++L + G V+
Sbjct: 320 WGNNGSGQLGDGTTTDRLTPVQVS--ELDGVKAIAVGNSFPLSNSNGSYSLAVRGDGTVW 377
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
A G N GQLG I S P +++ L + +S H+ A+ DG ++ WGKN+NG
Sbjct: 378 AWGSNSTGQLGDGTTISRS-RPAQVNALSG-ITAVSASSDHALAMRDDGTVWSWGKNTNG 435
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+LG A ++IP+ +V LSG+ + A G SV+V GK +WG G G LG G
Sbjct: 436 KLGDETTAHRLIPV--QVHGLSGV--RSVAAGESHSVSVREDGKAWAWGYRGMGLLGDGA 491
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV-DKMLF 272
FL + P L +IA+ G S + E+ ++++G ++ D
Sbjct: 492 M-----FL----SFVPVQTMGLT-ATAQIASHGN-RSLAVKEDNTLWVWGSSSLGDLGDG 540
Query: 273 QEGNHARRPSLI-----------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G H S++ + G L+ WGSN G LG GS +P V
Sbjct: 541 STGAHPVPSSILDDVKAVAAGNDYSLAVRNNGSLWAWGSNSIGQLGDGSTTNRLTPVPVN 600
Query: 316 GPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
G E+ V + A S+G + W W G +S GQLG G+ ++ P
Sbjct: 601 G--LENVVGAAASFSVSLALRSDGTV--WAW----------GLNSVGQLGDGSTINRSTP 646
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 110/269 (40%), Gaps = 65/269 (24%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG GS +R PV + E + A + +L L G V+A GLN GQ
Sbjct: 577 WGSNSIGQLGDGSTTNRLTPVPVNGLEN--VVGAAASFSVSLALRSDGTVWAWGLNSVGQ 634
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I S P + GL +V ++T HS A+ DG ++ WG N +GQLG G
Sbjct: 635 LGDGSTINRS-TPGPVGGLV-HIVGVATSGGHSLALRNDGTVWAWGGNHDGQLGDGTTTN 692
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P P +V LSG+ K A S V G V +WG SG+LG G
Sbjct: 693 Q--PKPVQVSGLSGV--KAVAAAIVSSAVVRDNGTVWAWGDNYSGQLGDGT--------- 739
Query: 223 STSEYTPRLIKELEGVK------------------------------------------- 239
+T TP L+ L GVK
Sbjct: 740 TTDRLTPVLVSGLSGVKALASGNHHFLALRNDGTVWAWGDNYYSQLGDGTRTQRSTPVQV 799
Query: 240 -----VKIAAAGFLHSACIDENGRVYIFG 263
VK+ AAG HS + ++G V+ +G
Sbjct: 800 RGLSDVKLIAAGENHSMAVRKDGTVWTWG 828
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 112/272 (41%), Gaps = 65/272 (23%)
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
++ G H+ + DG ++ WG N GQLG G + P+P +V LSGI + A +
Sbjct: 145 VAVGTQHTLLLRPDGTVWAWGPNDYGQLGDGTTTNR--PVPVQVGGLSGI--RAVAASSD 200
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
S+AV G V +WG SG+LG G + L TP + L +K A G+
Sbjct: 201 HSLAVRDDGTVWAWGINSSGQLGDGTTNDRL---------TPVQVAGLSSIKRVAAGDGY 251
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDV 307
+ + GD G ++ WG N +G LG G+
Sbjct: 252 ----------SLAVHGD----------------------GTVWAWGINSSGQLGDGTTTD 279
Query: 308 LHSPERVQGPFSESPVDQVSC------GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSG 361
+P RV+G SE V +VS G H A+ G W WG ++
Sbjct: 280 RLTPGRVKG-LSE--VVEVSAAKYSLLGSAHVLAV-RGDGTVWAWG----------NNGS 325
Query: 362 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 393
GQLG G D + P V+ + VKA+ V F
Sbjct: 326 GQLGDGTTTDRLTPVQVSELDGVKAIAVGNSF 357
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV+ S +KALA G H L L G V+A G N + Q
Sbjct: 727 WGDNYSGQLGDGTTTDRLTPVLVSGLS--GVKALASGNHHFLALRNDGTVWAWGDNYYSQ 784
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+++ GL +V I+ G +HS A+ DG ++ WG N++GQLG G
Sbjct: 785 LGDGTRTQRS-TPVQVRGLS-DVKLIAAGENHSMAVRKDGTVWTWGLNTSGQLGNGLLDF 842
Query: 163 KVIPIP 168
+P+P
Sbjct: 843 SALPVP 848
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 158/379 (41%), Gaps = 61/379 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G LG G++ + PV + +A G +L + E ++ G + G
Sbjct: 479 WGYRGMGLLGDGAMFLSFVPVQTMGLT--ATAQIASHGNRSLAVKEDNTLWVWGSSSLGD 536
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + S + +V ++ G +S A+ +G L+ WG NS GQLG G
Sbjct: 537 LGDGSTGAHPVP----SSILDDVKAVAAGNDYSLAVRNNGSLWAWGSNSIGQLGDGSTTN 592
Query: 163 KVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ P+P +E + G AA F S+A+ G V +WG G+LG G
Sbjct: 593 RLTPVPVNGLENVVG-----AAASFSVSLALRSDGTVWAWGLNSVGQLGDGS-------- 639
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ + TP + L + V +A +G HS + +G V+ +G ++ + +P
Sbjct: 640 -TINRSTPGPVGGLVHI-VGVATSGG-HSLALRNDGTVWAWGGNHDGQLGDGTTTNQPKP 696
Query: 282 SLISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+SG G ++ WG N +G LG G+ +P V G S
Sbjct: 697 VQVSGLSGVKAVAAAIVSSAVVRDNGTVWAWGDNYSGQLGDGTTTDRLTPVLVSG---LS 753
Query: 322 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
V ++ G H A+ ++G + W WG D + S QLG G P V
Sbjct: 754 GVKALASGNHHFLALRNDGTV--WAWG--------DNYYS--QLGDGTRTQRSTPVQVRG 801
Query: 381 GENVKALQVSCGFNHTGAL 399
+VK ++ G NH+ A+
Sbjct: 802 LSDVKL--IAAGENHSMAV 818
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 87/170 (51%), Gaps = 8/170 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ ++ +PV S +KA+A + + + G V+A G N GQ
Sbjct: 677 WGGNHDGQLGDGTTTNQPKPVQVSGLS--GVKAVAAAIVSSAVVRDNGTVWAWGDNYSGQ 734
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+ +SGL V +++G HH A+ DG ++ WG N QLG G +
Sbjct: 735 LGDGTTTDR-LTPVLVSGLSG-VKALASGNHHFLALRNDGTVWAWGDNYYSQLGDGTRTQ 792
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+ P+ +V LS + K A G S+AV G V +WG SG+LG+G
Sbjct: 793 RSTPV--QVRGLSDV--KLIAAGENHSMAVRKDGTVWTWGLNTSGQLGNG 838
>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
Length = 1103
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 166/374 (44%), Gaps = 72/374 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + A +++ +ACG HT +T +G +Y G +
Sbjct: 332 WGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNS 391
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG +++ + + P R++G + + IS G H++ +T G+L+ +G + G LG G
Sbjct: 392 GLLGHGKDVSHWV-PKRVTGPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHG 450
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + I IP +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 451 DRDS--ISIPREVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDK 508
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L F AC
Sbjct: 509 GRLGHGDKEARL---------VPTCVAAL-------VEPNFCQVAC-------------- 538
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
H+ +L + G +YT GS G LG D P RV+G S+S V+++
Sbjct: 539 ---------GHSLTVALTNSGHIYTMGSPVYGQLGNPQADG-KLPARVEGKLSKSFVEEL 588
Query: 327 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 385
+CG H A + S ++ TWG G + G+LGHG+ D PT+V ++ +
Sbjct: 589 ACGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGSTDDRNTPTLVEALKDKQ 636
Query: 386 ALQVSCGFNHTGAL 399
++CG N T A+
Sbjct: 637 VKSIACGTNFTAAI 650
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 106/239 (44%), Gaps = 52/239 (21%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + + A G + VT G+V SWG GRLGHG +S
Sbjct: 298 LPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDA--------- 348
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
+ P+LI L + +++ A G H+ + +G +Y +GD
Sbjct: 349 HHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGD---------------------- 386
Query: 287 GELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTW 344
G+ +G LG G DV H P+RV GP + +SCG HTA + S GK+ T+
Sbjct: 387 ------GTYNSGLLGHGK-DVSHWVPKRVTGPLQGLHISSISCGPWHTALVTSAGKLFTF 439
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
G GTF G LGHG+ P V + ++ ++ +CG HT A++E +
Sbjct: 440 G----DGTF--------GVLGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAVVEVI 486
>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
Length = 1053
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 162/372 (43%), Gaps = 68/372 (18%)
Query: 43 WGNGDYGRLGLGSLESR---------WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WGN +G+LGLG +E W+P ++ +ACG HTLFLT +G VY
Sbjct: 6 WGNASHGQLGLGGIEDEQILTPSQIPWKP-------DSAVNQVACGHRHTLFLTASGKVY 58
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSN 152
A G ND+ QLG + PL+I L+ V+ QI+ G HS A+T G++ WG N
Sbjct: 59 ACGSNDYSQLGHELP---TKRPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWGDNEC 115
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG VI +P V L Q A G S+A+T G++ SWG+ G+LG
Sbjct: 116 GQLGHASD-QDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSNIYGQLGVK 174
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-L 271
S + S Y RL L G+ A G H+ I ++ V+ +G ++ L
Sbjct: 175 SPSEL-----SQCNYPMRLTT-LLGIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQLGL 228
Query: 272 FQEGNHARRPSLIS-----------GGELYTWGSNENGCL------------GIGSIDVL 308
E N A L + G E + +NE G G S ++L
Sbjct: 229 NDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEML 288
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGH 366
R+ S + QV+CG +HT A+ S G+I +G G S GQLG
Sbjct: 289 ---PRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLG------------SSGQLGT 333
Query: 367 GNDVDYIHPTIV 378
N P +V
Sbjct: 334 RNTKSLNLPQVV 345
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 117/278 (42%), Gaps = 53/278 (19%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P+++ Q A G ++ +T GKV + G
Sbjct: 2 ELYCWGNASHGQLGLGGIEDEQILTPSQIPWKPDSAVNQVACGHRHTLFLTASGKVYACG 61
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ +LGH + P I ELE + A G HS + E G+V +
Sbjct: 62 SNDYSQLGHELPTK-----------RPLQIPELEDYVITQIACGSRHSMALTEWGQVLSW 110
Query: 263 GDR-------AVDKMLFQE------------------GNHARRPSLISGGELYTWGSNEN 297
GD A D+ + Q NH+ +L GELY+WGSN
Sbjct: 111 GDNECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSL--ALTCCGELYSWGSNIY 168
Query: 298 GCLGIGSIDVL---HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFS 354
G LG+ S L + P R+ P ++CG HT IS+ + +GW
Sbjct: 169 GQLGVKSPSELSQCNYPMRLTTLLG-IPAAAIACGGNHTFLISKSSAV-FGW-------- 218
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
G ++ GQLG ++ + +PT + + V+CG
Sbjct: 219 --GRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACG 254
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 21/127 (16%)
Query: 277 HARRPSLISGGELYTWGSNENGCLG--IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
H L + G++Y GSN+ LG + + L PE + + Q++CG +H+
Sbjct: 45 HRHTLFLTASGKVYACGSNDYSQLGHELPTKRPLQIPE-----LEDYVITQIACGSRHSM 99
Query: 335 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNFGENVKALQVSCG 392
A++E G++L+WG + GQLGH +D D I P IV + + +Q++CG
Sbjct: 100 ALTEWGQVLSWG------------DNECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACG 147
Query: 393 FNHTGAL 399
NH+ AL
Sbjct: 148 NNHSLAL 154
>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
Length = 4835
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4064 WGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4123
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4124 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4181
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4182 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4238
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4239 -------RRPRQVQGLQGKKVIAIATGSLHCVCCSEDG---------------------- 4269
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4270 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4320
Query: 340 KILTWG 345
K + G
Sbjct: 4321 KPASAG 4326
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3070 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3129
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3130 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3187
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3188 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3244
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH C+
Sbjct: 3245 -------RKPQVVEGLRGKKIVHVAVGALH--CL-------------------------- 3269
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
++ G++Y WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3270 --AVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3322
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 165/386 (42%), Gaps = 57/386 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P C A L GG TLF +T G +YATG G
Sbjct: 3958 WGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQL-IGGEQTLFAVTADGKLYATGYGAGG 4016
Query: 102 QLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LG+ S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4017 RLGVGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4074
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G ++ P +E L G A G S VT G + +WG G GRLGH
Sbjct: 4075 GNRSP--CDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD---- 4128
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4129 -----SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 4183
Query: 276 NHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + P +L G +YTWG + LG GS D + P +
Sbjct: 4184 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 4243
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
VQG V ++ G H SE G++ TW G + GQLG G
Sbjct: 4244 VQG-LQGKKVIAIATGSLHCVCCSEDGEVYTW------------GDNDEGQLGDGTTNAI 4290
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4291 QRPRLVAALQGKKVNRVACGSAHTLA 4316
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2998 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3057
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3058 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3115
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3116 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3166
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3167 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3226
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3227 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG---- 3281
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3282 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3322
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSVA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPSALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + SVA+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 148/353 (41%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV A G GD A+ ++ G++
Sbjct: 596 MLVAGLKGLKVIDVACG---------------SGD-------------AQTLAVTENGQV 627
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG G
Sbjct: 628 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSVALTKDGQVYSWGKGD 686
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 687 NQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2952 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3009
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 3010 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 3054
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3055 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3093
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3094 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3140
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3141 PKMVKVLLGHRVIQVACGSRDAQTL 3165
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3953 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 4010
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4011 GYGAGGRLGVGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4053
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4054 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTE 4093
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4094 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4140
Query: 381 GENVKALQVSCG 392
+ + + V+CG
Sbjct: 4141 LQGHRVVDVACG 4152
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
WG GD RLG G+ E P + + + +A G H L LTE V++ G ND
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
F L +++ EP + GL K +V I+ G S A
Sbjct: 742 HFDTLRVTKP-----EPSALPGLDTKHIVGIACGPAQSFA 776
>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
Length = 1385
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 171/369 (46%), Gaps = 64/369 (17%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-I 128
K ++ ++CGG H +T+ G +Y+ G G+LG + +P I L ++ +
Sbjct: 354 KLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP-QPKLIDALANMNIELV 412
Query: 129 STGYHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALG 185
+ G +H+ A+T+ G+LY WG +++G LG G + + +P +V L GI + G
Sbjct: 413 ACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHW--VPKRVNGPLEGIHVSAISCG 470
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+ VT G++ ++G G G LGHG S+ PR ++ L+G++ AA
Sbjct: 471 PWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSL---------SVPREVESLKGLRTVRAAC 521
Query: 246 GFLHSACIDE------------NGRVYIFGD-------------RAVDKML--FQEGN-- 276
G H+A + E +G+++ +GD R V + E N
Sbjct: 522 GVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFC 581
Query: 277 -----HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 331
H +L + G +YT GS G LG D + P RV+G ++ V+++SCG
Sbjct: 582 QIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGML-PVRVEGKLHKNFVEEISCGAY 640
Query: 332 HTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 390
H A + S ++ TWG G + G+LGHG+ D PT+V ++ + V
Sbjct: 641 HVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRSSPTLVESLKDKQVRTVV 688
Query: 391 CGFNHTGAL 399
CG N T A+
Sbjct: 689 CGINFTAAI 697
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 126/302 (41%), Gaps = 71/302 (23%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL + +K +V IS G H++ +T GE+Y WG+ S G+LG G +P P ++
Sbjct: 347 KPLEFA-VKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCD--VPQPKLIDA 403
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ + + A G + AVT G + +WG G SG LGHG E S + P+
Sbjct: 404 LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNE---------VSHWVPKR 454
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
+ LEG+ V + G H+A + G+++ FGD +
Sbjct: 455 VNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSF----------------------- 491
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------------ 338
G LG G L P V+ V + +CG HTAA+ E
Sbjct: 492 -------GVLGHGDRQSLSVPREVESLKGLRTV-RAACGVWHTAAVVEVMVGNSSSSNCS 543
Query: 339 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
GKI TWG G G+LGHG+ + PT V Q++CG T
Sbjct: 544 SGKIFTWGDGDK------------GRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTV 591
Query: 398 AL 399
AL
Sbjct: 592 AL 593
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G ++R P +A + + +ACG T+ LT +G VY G +GQ
Sbjct: 550 WGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQ 609
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + G + P+R+ G K V +IS G +H + +T E+Y WGK +NG+LG G
Sbjct: 610 LGNPQADG--MLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDT 667
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ PT VE L + G + A+
Sbjct: 668 DDRS--SPTLVESLKDKQVRTVVCGINFTAAI 697
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 104/241 (43%), Gaps = 56/241 (23%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
IP +E + + + G + VT G++ SWG GRLGHG + +
Sbjct: 345 IPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDV--------- 395
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
P+LI L + +++ A G H+ +
Sbjct: 396 PQPKLIDALANMNIELVACGEYHTCAV------------------------------TLS 425
Query: 287 GELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 342
G+LYTWG ++ +G LG G+ +V H P+RV GP V +SCG HTA + S G++
Sbjct: 426 GDLYTWGNGTSNSGLLGHGN-EVSHWVPKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLF 484
Query: 343 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 402
T+G G S G LGHG+ P V + ++ ++ +CG HT A++E
Sbjct: 485 TFGDG------------SFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEV 532
Query: 403 V 403
+
Sbjct: 533 M 533
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 106/277 (38%), Gaps = 76/277 (27%)
Query: 43 WGNG--DYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WGNG + G LG G+ S W P V E + A++CG HT +T G ++ G
Sbjct: 431 WGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGS 490
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAIT------------VDGELYM 146
FG LG + S+ P + LK V+ + G H++A+ G+++
Sbjct: 491 FGVLGHGDRQSLSV-PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFT 549
Query: 147 WGKNSNGQLGLGKKAAKVIP---------------------------------------- 166
WG G+LG G K +++P
Sbjct: 550 WGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQ 609
Query: 167 ---------IPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+P +VE L F ++ + G +T +V +WG G +GRLGHG
Sbjct: 610 LGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGD--- 666
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
+ +P L++ L+ +V+ G +A I
Sbjct: 667 ------TDDRSSPTLVESLKDKQVRTVVCGINFTAAI 697
>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Gorilla gorilla gorilla]
Length = 4586
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 138/301 (45%), Gaps = 46/301 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 3815 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 3874
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 3875 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 3932
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 3933 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3989
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 3990 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4020
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4021 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4071
Query: 340 K 340
K
Sbjct: 4072 K 4072
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 2823 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2882
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 2883 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2940
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 2941 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2997
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 2998 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 3031
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3032 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3075
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 163/385 (42%), Gaps = 55/385 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG P C A L G L +T G +YATG G+
Sbjct: 3709 WGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVTADGKLYATGYGAGGR 3768
Query: 103 LGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG G
Sbjct: 3769 LGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 3826
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 3827 NRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD----- 3879
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+ +
Sbjct: 3880 ----SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 3935
Query: 277 HARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
+ P +L G +YTWG + LG GS D + P +V
Sbjct: 3936 GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQV 3995
Query: 315 QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
QG V ++ G H +E G++ TW G + GQLG G
Sbjct: 3996 QG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNAIQ 4042
Query: 374 HPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4043 RPRLVAALQGKKVNRVACGSAHTLA 4067
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2751 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 2810
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 2811 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 2868
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 2869 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2919
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 2920 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2979
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 2980 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3034
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3035 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3075
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 129/286 (45%), Gaps = 44/286 (15%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D +LG + + EP IS K VV I+ G +
Sbjct: 481 GHHYLALAATGEVYSWGCGDGRRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 539
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 540 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 597
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 598 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 648
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 649 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 708
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAA 335
+WGSN+ C ++ V PE P + ++CG ++A
Sbjct: 709 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDTKHIVGIACGPAQSSA 752
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD RLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 496 WGCGDGRRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 554
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 555 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 613
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 614 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 671
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 672 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 711
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 145/353 (41%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L + G V N +L P + GL
Sbjct: 419 PIQCKGLANLGVTQIACAEKRLLIVXRNGRVXTQAYN-----------SDTLVPQLVQGL 467
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ VV+I+ + HH A+ GE+Y WG +LG G +P+ P + SG
Sbjct: 468 ASRNVVKIAAHSDGHHYLALAATGEVYSWGCGDGRRLGHGD----TVPLEEPKVISAFSG 523
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 524 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 571
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV A G GD A+ ++ G++
Sbjct: 572 MLVAGLKGLKVIDVACGS---------------GD-------------AQTLAVTENGQV 603
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG G
Sbjct: 604 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 662
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 663 NQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 703
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 552 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 611
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 612 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 670
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 671 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 713
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2705 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2762
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 2763 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 2807
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 2808 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 2846
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 2847 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 2893
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 2894 PKMVKVLLGHRVIQVACGSRDAQTL 2918
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 109/252 (43%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + +AVT GK+ +
Sbjct: 3704 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLLAVTADGKLYAT 3761
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 3762 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 3804
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 3805 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 3844
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 3845 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 3891
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 3892 LQGHRVVDIACG 3903
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 606 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 665
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 666 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 717
>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
Length = 4837
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4066 WGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4125
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4126 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4183
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4184 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4240
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4241 -------RRPRQVQGLQGKKVIAIATGSLHCVCCSEDG---------------------- 4271
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4272 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4322
Query: 340 KILTWG 345
K + G
Sbjct: 4323 KPASAG 4328
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH C+
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALH--CL-------------------------- 3271
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
++ G++Y WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3272 --AVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3324
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 165/386 (42%), Gaps = 57/386 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P C A L GG TLF +T G +YATG G
Sbjct: 3960 WGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQL-IGGEQTLFAVTADGKLYATGYGAGG 4018
Query: 102 QLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LG+ S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4019 RLGVGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4076
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G ++ P +E L G A G S VT G + +WG G GRLGH
Sbjct: 4077 GNRSP--CDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD---- 4130
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4131 -----SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 4185
Query: 276 NHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + P +L G +YTWG + LG GS D + P +
Sbjct: 4186 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 4245
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
VQG V ++ G H SE G++ TW G + GQLG G
Sbjct: 4246 VQG-LQGKKVIAIATGSLHCVCCSEDGEVYTW------------GDNDEGQLGDGTTNAI 4292
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4293 QRPRLVAALQGKKVNRVACGSAHTLA 4318
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG---- 3283
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3284 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSVA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPSALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + SVA+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 148/353 (41%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV A G GD A+ ++ G++
Sbjct: 596 MLVAGLKGLKVIDVACG---------------SGD-------------AQTLAVTENGQV 627
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG G
Sbjct: 628 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSVALTKDGQVYSWGKGD 686
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 687 NQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 3056
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3057 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3095
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3096 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3142
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTL 3167
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 4012
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4013 GYGAGGRLGVGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4055
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4056 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTE 4095
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4096 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4142
Query: 381 GENVKALQVSCG 392
+ + + V+CG
Sbjct: 4143 LQGHRVVDVACG 4154
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
WG GD RLG G+ E P + + + +A G H L LTE V++ G ND
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
F L +++ EP + GL K +V I+ G S A
Sbjct: 742 HFDTLRVTKP-----EPSALPGLDTKHIVGIACGPAQSFA 776
>gi|443715597|gb|ELU07510.1| hypothetical protein CAPTEDRAFT_122289, partial [Capitella teleta]
Length = 477
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 172/381 (45%), Gaps = 52/381 (13%)
Query: 7 TAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCS 66
A +K+++++D L G + + R F +G+ +G+LGLG + +P
Sbjct: 15 NAPSKFWIREDKVLHISCGDEHTSLLAGDGRVFT--FGDNAWGQLGLGHTKPVTKPTRIK 72
Query: 67 AFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV 126
+ + + +ACG +HTL TE+G +Y+ G N+ QLG+ + P I GL+ V
Sbjct: 73 SLKAEKVHQVACGRSHTLLATESGKIYSFGCNNDRQLGLGLDDEKVCSPTVIKGLESHAV 132
Query: 127 Q-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK-----VIPIPTKVECLSGIFTK 180
+ +S G +HS +T G +Y+WG GQLG G+ K + + +V C+
Sbjct: 133 KMLSAGMYHSCVLTDKGSVYLWGGGEEGQLGFGEDVTKHETPERLDVDDEVVCI------ 186
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
A G+ + VT GGK+L++G G+LG G ++ P+++ +EG V
Sbjct: 187 --ACGYYHTALVTAGGKLLTFGETDEGKLGRGSDTG--------DNCLPKVVDGIEGHVV 236
Query: 241 KIAAAGFLHSACIDENGRVYIFGD---------------RAVDKMLFQEGNHARRPS--- 282
+A G H+ I VY FG+ K+++Q+ R S
Sbjct: 237 SVACGG-AHTVAI-TGWLVYTFGNGSSGQLGHGNMLLQADTPHKIVWQKPTKVRSASCGE 294
Query: 283 -----LISGGELYTWGSNENGCLGIGSIDVLHSPERVQG-PFSESPVDQVSCGWKHTAAI 336
+ G+L+T G +G L +G + + + FS+ V+QVSCG HT A
Sbjct: 295 NHTALVTDRGQLWTCGDGRHGKLALGEENFANQFKPCHSVRFSKFVVEQVSCGGCHTLAT 354
Query: 337 SEGKILTWGWGGSHGTFSEDG 357
GK +H + E+G
Sbjct: 355 --GKPSLQNGNAAHDSSDEEG 373
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 148/338 (43%), Gaps = 61/338 (18%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
TG V+ FG+ ++N P + + +V+ IS G H+S + DG ++ +G
Sbjct: 1 TGAVFT-----FGKSKFADNA-----PSKFWIREDKVLHISCGDEHTSLLAGDGRVFTFG 50
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
N+ GQLGLG K + PT+++ L Q A G ++ T GK+ S+G +
Sbjct: 51 DNAWGQLGLGH--TKPVTKPTRIKSLKAEKVHQVACGRSHTLLATESGKIYSFGCNNDRQ 108
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LG G L +P +IK LE VK+ +AG HS + + G VY++G
Sbjct: 109 LGLG--------LDDEKVCSPTVIKGLESHAVKMLSAGMYHSCVLTDKGSVYLWGGGEEG 160
Query: 269 KMLFQEG--NHARRPSL-------------------ISGGELYTWGSNENGCLGIGSIDV 307
++ F E H L +GG+L T+G + G LG GS
Sbjct: 161 QLGFGEDVTKHETPERLDVDDEVVCIACGYYHTALVTAGGKLLTFGETDEGKLGRGSDTG 220
Query: 308 LHS-PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGH 366
+ P+ V G E V V+CG HT AI+ + T+G G S GQLGH
Sbjct: 221 DNCLPKVVDG--IEGHVVSVACGGAHTVAITGWLVYTFGNGSS------------GQLGH 266
Query: 367 GN---DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GN D H + + + K SCG NHT + +
Sbjct: 267 GNMLLQADTPHKIV--WQKPTKVRSASCGENHTALVTD 302
>gi|444910459|ref|ZP_21230644.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444719396|gb|ELW60193.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 693
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 168/380 (44%), Gaps = 61/380 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV S + AL+ ++TL L G V+A G N +GQ
Sbjct: 220 WGSNFSGQLGDGTATPRLSPVQVSGLTN--VVALSADDSYTLALRTDGTVWAWGYNSYGQ 277
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+++ GL VV +S GY HS A+ DG ++ WG N NGQLG G
Sbjct: 278 LGDGTTT-PRLSPVQVPGLTN-VVALSAGYSHSLALRTDGTVWAWGYNYNGQLGNGIPTQ 335
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ IP V L + A G+ S+A+ G V +WG G+LG G
Sbjct: 336 RSPSIP--VFGLIDVVALSA--GYSHSLALRTDGTVWAWGYNSLGQLGDG---------- 381
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------------------- 263
T+ P ++ + V +AG HS + +G V +G
Sbjct: 382 -TTIPRPSPVQVPDLTDVVALSAGDSHSLALRTDGTVRAWGVNYSGQLGDGTTTHRLSPV 440
Query: 264 ---DRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
D L GNH +L + G ++ WGSN +G LG G+ SP ++ G
Sbjct: 441 QVPDLTDVVALSAGGNHTL--ALRTNGTVWAWGSNSDGQLGDGTTTPRLSPVQMLG---L 495
Query: 321 SPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
+ V +S G+ H+ A+ ++G + W W G +S GQLG G + P V
Sbjct: 496 TNVVALSAGYYHSLAVHTDGTV--WAW----------GSNSDGQLGDGTTTHRLTPVQVP 543
Query: 380 FGENVKALQVSCGFNHTGAL 399
+V AL S G +H+ AL
Sbjct: 544 GLTDVVAL--SAGDSHSLAL 561
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 172/381 (45%), Gaps = 63/381 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G+ R PV + AL+ G H+L L G V+A G N GQ
Sbjct: 120 WGYNFYGQLGDGTTTPRLAPVQVPGLTD--VVALSSGIYHSLALRTDGTVWAWGDNASGQ 177
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+++ GL +VV +S G +HS A+ DG ++ WG N +GQLG G
Sbjct: 178 LGDGTAT-RRLSPVQVPGLT-DVVALSAGGYHSLAVRTDGTVWAWGSNFSGQLGDGTATP 235
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V L+ + A + ++A+ G V +WG G+LG G
Sbjct: 236 RLSPV--QVSGLTNVVALSADDSY--TLALRTDGTVWAWGYNSYGQLGDGTT-------- 283
Query: 223 STSEYTPRLIK-ELEGVKVKIA-AAGFLHSACIDENGRVYIFG-------------DRA- 266
TPRL ++ G+ +A +AG+ HS + +G V+ +G R+
Sbjct: 284 -----TPRLSPVQVPGLTNVVALSAGYSHSLALRTDGTVWAWGYNYNGQLGNGIPTQRSP 338
Query: 267 -------VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
+D + G ++ +L + G ++ WG N G LG G+ + P VQ P
Sbjct: 339 SIPVFGLIDVVALSAG-YSHSLALRTDGTVWAWGYNSLGQLGDGT--TIPRPSPVQVP-D 394
Query: 320 ESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
+ V +S G H+ A+ ++G + W G + GQLG G + P V
Sbjct: 395 LTDVVALSAGDSHSLALRTDGTVRAW------------GVNYSGQLGDGTTTHRLSPVQV 442
Query: 379 NFGENVKALQVSCGFNHTGAL 399
+V AL S G NHT AL
Sbjct: 443 PDLTDVVAL--SAGGNHTLAL 461
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 169/378 (44%), Gaps = 57/378 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV + AL+ G H L L G V+A G N GQ
Sbjct: 20 WGSNSSGQLGDGTTTPRGSPVQVPGLTD--VVALSAGNHHCLALRTDGTVWAWGSNSSGQ 77
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L +++ GL +VV +S G ++ A+ DG ++ WG N GQLG G
Sbjct: 78 LGDGTTT-PRLSSVQVPGL-TDVVALSAGSSYTLALRTDGTVWAWGYNFYGQLGDGTTTP 135
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V L+ + + G S+A+ G V +WG SG+LG G
Sbjct: 136 RLAPV--QVPGLTDVVALSS--GIYHSLALRTDGTVWAWGDNASGQLGDGT--------- 182
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T +P + L V V ++A G+ HS + +G V+ +G ++ P
Sbjct: 183 ATRRLSPVQVPGLTDV-VALSAGGY-HSLAVRTDGTVWAWGSNFSGQLGDGTATPRLSPV 240
Query: 283 LISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
+SG G ++ WG N G LG G+ SP +V G +
Sbjct: 241 QVSGLTNVVALSADDSYTLALRTDGTVWAWGYNSYGQLGDGTTTPRLSPVQVPG---LTN 297
Query: 323 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
V +S G+ H+ A+ ++G + W W G++ GQLG+G P+I FG
Sbjct: 298 VVALSAGYSHSLALRTDGTV--WAW----------GYNYNGQLGNGIPTQR-SPSIPVFG 344
Query: 382 ENVKALQVSCGFNHTGAL 399
+ + +S G++H+ AL
Sbjct: 345 L-IDVVALSAGYSHSLAL 361
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 161/349 (46%), Gaps = 63/349 (18%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+A G +H+L L G V+A G N GQLG P+++ GL +VV +S G HH
Sbjct: 1 MAAGYSHSLALHTDGTVWAWGSNSSGQLGDGTTTPRG-SPVQVPGLT-DVVALSAGNHHC 58
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ DG ++ WG NS+GQLG G ++ + +V L+ + A G ++A+
Sbjct: 59 LALRTDGTVWAWGSNSSGQLGDGTTTPRLSSV--QVPGLTDVVALSA--GSSYTLALRTD 114
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIA-AAGFLHSACI 253
G V +WG G+LG G TPRL ++ G+ +A ++G HS +
Sbjct: 115 GTVWAWGYNFYGQLGDGTT-------------TPRLAPVQVPGLTDVVALSSGIYHSLAL 161
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLI----------------------SGGELYT 291
+G V+ +GD A ++ +G RR S + + G ++
Sbjct: 162 RTDGTVWAWGDNASGQL--GDGTATRRLSPVQVPGLTDVVALSAGGYHSLAVRTDGTVWA 219
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 350
WGSN +G LG G+ SP +V G + V +S +T A+ ++G + W W
Sbjct: 220 WGSNFSGQLGDGTATPRLSPVQVSG---LTNVVALSADDSYTLALRTDGTV--WAW---- 270
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G++S GQLG G + P V NV AL S G++H+ AL
Sbjct: 271 ------GYNSYGQLGDGTTTPRLSPVQVPGLTNVVAL--SAGYSHSLAL 311
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 155/356 (43%), Gaps = 53/356 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV + AL+ G +H+L L G V A G+N GQ
Sbjct: 370 WGYNSLGQLGDGTTIPRPSPVQVPDLTD--VVALSAGDSHSLALRTDGTVRAWGVNYSGQ 427
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L P+++ L +VV +S G +H+ A+ +G ++ WG NS+GQLG G
Sbjct: 428 LGDGTTT-HRLSPVQVPDL-TDVVALSAGGNHTLALRTNGTVWAWGSNSDGQLGDGTTTP 485
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ ++ L+ + A G+ S+AV G V +WG+ G+LG G
Sbjct: 486 RLSPV--QMLGLTNVVALSA--GYYHSLAVHTDGTVWAWGSNSDGQLGDGT--------- 532
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV----DKMLFQEGNHA 278
+T TP + L V +AG HS + +G V+ +G + D G+
Sbjct: 533 TTHRLTPVQVPGL--TDVVALSAGDSHSLALRTDGTVWAWGSNSSSQLGDGTTTPRGSPV 590
Query: 279 RRPSLI----------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
+ P L + G ++ WGSN G LG G+ P V S
Sbjct: 591 QVPGLTDVVALSAGGAHSLALRTDGTVWAWGSNYYGQLGDGTTTPRLFPVLVSNLTGTS- 649
Query: 323 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
+ G H+ A+ + GT G++ GGQLG G ++HP V
Sbjct: 650 --NLYAGAGHSLALR-----------TDGTGRAWGNNYGGQLGDGTSAFFLHPVQV 692
>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Pan paniscus]
Length = 4839
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4068 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4127
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4128 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4185
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4186 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4242
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4243 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4273
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4274 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4324
Query: 340 KILTWG 345
K + G
Sbjct: 4325 KPASAG 4330
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3076 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3135
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3136 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3193
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3194 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3250
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 3251 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 3284
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3285 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3328
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3962 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4019
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4020 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4077
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4078 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4132
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4133 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4187 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4246
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4247 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4293
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4294 IQRPRLVAALQGKKVNRVACGSAHTLA 4320
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3004 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3063
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3064 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3121
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3122 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3172
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3173 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3232
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3233 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3287
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3288 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3328
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 450 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 508
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 509 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 566
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 567 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 617
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 618 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 677
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 678 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 722
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 465 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 523
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 524 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 582
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 583 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 640
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 641 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 680
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 148/353 (41%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 388 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 436
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 437 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 492
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 493 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 540
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV A G GD A+ ++ G++
Sbjct: 541 MLVAGLKGLKVIDVACG---------------SGD-------------AQTLAVTENGQV 572
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG G
Sbjct: 573 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 631
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 632 NQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 672
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 521 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 580
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 581 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 639
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 640 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 682
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2958 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3015
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 3016 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 3060
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3061 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3099
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3100 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3146
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3147 PKMVKVLLGHRVIQVACGSRDAQTL 3171
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4015 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4057
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4058 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 4097
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4098 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4144
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 4145 LQGHRVVDIACG 4156
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 575 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 634
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 635 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 686
>gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula]
gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula]
Length = 1124
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 165/374 (44%), Gaps = 73/374 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + A +++ +ACG HT +T +G +Y G ++
Sbjct: 356 WGEESGGRLGHGVDSDVLHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGNGAYNY 415
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G + G LG G
Sbjct: 416 GLLGHGNQVSHWV-PKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHG 474
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ K + +P +VE L G+ T +A+ G + AV GK+ +WG G
Sbjct: 475 DR--KSVSLPREVESLKGLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 532
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + +E F AC
Sbjct: 533 GRLGHGDKEAKL---------VPTCVALVE--------HNFCQVAC-------------- 561
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
H+ +L + G +Y GS G LG D P RV+G +S V+++
Sbjct: 562 ---------GHSLTVALTTSGHVYAMGSPVYGQLGNPQADG-KLPTRVEGKLLKSFVEEI 611
Query: 327 SCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 385
+CG H A ++ ++ TWG G + G+LGHG+ D +PT+V+ ++
Sbjct: 612 ACGAYHVAVLTLRNEVYTWGKGAN------------GRLGHGDTDDRNNPTLVDALKDKH 659
Query: 386 ALQVSCGFNHTGAL 399
++CG N T A+
Sbjct: 660 VKSIACGTNFTAAI 673
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 107/249 (42%), Gaps = 52/249 (20%)
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
GLG K + P +E + + A G + VT G++ SWG GRLGHG +S
Sbjct: 313 GLGVKIDSLFP--KALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDS 370
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+L P+LI L +++ A G H+ + +G +Y +G+ A + L G
Sbjct: 371 DVL---------HPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHG 421
Query: 276 NHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
N ++ W P+RV GP V +SCG HTA
Sbjct: 422 N-----------QVSHW-----------------VPKRVNGPLEGIHVSYISCGPWHTAV 453
Query: 336 I-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
+ S G++ T+G GTF G LGHG+ P V + ++ ++ SCG
Sbjct: 454 VTSAGQLFTFG----DGTF--------GALGHGDRKSVSLPREVESLKGLRTMRASCGVW 501
Query: 395 HTGALLEYV 403
HT A++E +
Sbjct: 502 HTAAVVEVM 510
>gi|148908280|gb|ABR17254.1| unknown [Picea sitchensis]
Length = 286
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 126/268 (47%), Gaps = 58/268 (21%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
E R G +++V+ IS G H+ A+ + WG+ +GQLG G + P+PT V
Sbjct: 5 EATRNDGQRRKVLLISAGASHTVALVAGNLVCSWGRGEDGQLGHGDAEDR--PMPTFVSA 62
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
L G G + + A + V+ SWG G GRLGHG S + + P I
Sbjct: 63 LDGCEITSVICGADHTTAYSDSRLVVYSWGWGDFGRLGHGNSSDL---------FIPHAI 113
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW 292
K L+G+++K A G H + N GE+ +W
Sbjct: 114 KTLQGLQIKQIACGDSHCLAVTIN------------------------------GEVQSW 143
Query: 293 GSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSH 350
G N+NG LG+G ++ HS P+RV+ P +E V QVSCGW+HT AI+ + + +WG G S
Sbjct: 144 GRNQNGQLGVGD-NIDHSFPQRVKLP-AEEEVVQVSCGWRHTVAITGKSNVFSWGRGTS- 200
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
GQLGHG+ +D P ++
Sbjct: 201 -----------GQLGHGDILDRNMPVLI 217
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 92/173 (53%), Gaps = 5/173 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG G+ G+LG G E R P SA + + ++ CG HT +++ VY+ G DFG
Sbjct: 38 WGRGEDGQLGHGDAEDRPMPTFVSALDGCEITSVICGADHTTAYSDSRLVVYSWGWGDFG 97
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N P I L+ ++ QI+ G H A+T++GE+ WG+N NGQLG+G
Sbjct: 98 RLG-HGNSSDLFIPHAIKTLQGLQIKQIACGDSHCLAVTINGEVQSWGRNQNGQLGVGDN 156
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
P K+ + Q + G+ +VA+TG V SWG G SG+LGHG
Sbjct: 157 IDHSFPQRVKLPAEEEVV--QVSCGWRHTVAITGKSNVFSWGRGTSGQLGHGD 207
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 79/140 (56%), Gaps = 2/140 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P + +K +ACG +H L +T G V + G N GQ
Sbjct: 91 WGWGDFGRLGHGNSSDLFIPHAIKTLQGLQIKQIACGDSHCLAVTINGEVQSWGRNQNGQ 150
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ +NI +S P R+ ++EVVQ+S G+ H+ AIT ++ WG+ ++GQLG G
Sbjct: 151 LGVGDNIDHSF-PQRVKLPAEEEVVQVSCGWRHTVAITGKSNVFSWGRGTSGQLGHGDIL 209
Query: 162 AKVIPIPTKVECLSGIFTKQ 181
+ +P+ + + G +Q
Sbjct: 210 DRNMPVLIEALSVDGSACEQ 229
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 87/216 (40%), Gaps = 52/216 (24%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G +VA+ G V SWG G G+LGHG + P + L+G ++
Sbjct: 22 GASHTVALVAGNLVCSWGRGEDGQLGHGD---------AEDRPMPTFVSALDGCEITSVI 72
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGS 304
G H+ ++ V +Y+WG + G LG G+
Sbjct: 73 CGADHTTAYSDSRLV-----------------------------VYSWGWGDFGRLGHGN 103
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQ 363
L P ++ + Q++CG H A++ G++ +WG + GQ
Sbjct: 104 SSDLFIPHAIK-TLQGLQIKQIACGDSHCLAVTINGEVQSWG------------RNQNGQ 150
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG G+++D+ P V + +QVSCG+ HT A+
Sbjct: 151 LGVGDNIDHSFPQRVKLPAEEEVVQVSCGWRHTVAI 186
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 11/131 (8%)
Query: 269 KMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 328
K+L + +L++G + +WG E+G LG G + P V + V C
Sbjct: 15 KVLLISAGASHTVALVAGNLVCSWGRGEDGQLGHGDAEDRPMPTFVSA-LDGCEITSVIC 73
Query: 329 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 388
G HT A S+ +++ + WG G F G+LGHGN D P + + ++ Q
Sbjct: 74 GADHTTAYSDSRLVVYSWG--WGDF--------GRLGHGNSSDLFIPHAIKTLQGLQIKQ 123
Query: 389 VSCGFNHTGAL 399
++CG +H A+
Sbjct: 124 IACGDSHCLAV 134
>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
Length = 4836
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4124
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4125 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4182
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4183 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4239
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4240 -------RRPRQVQGLQGKKVIAIATGSLHCVCCSEDG---------------------- 4270
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4271 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4321
Query: 340 KILTWG 345
K + G
Sbjct: 4322 KPASAG 4327
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH C+
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALH--CL-------------------------- 3271
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
++ G++Y WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3272 --AVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3324
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 168/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3959 WGHNHRGQLGGIEGAKVKVPTPCEALA--ALRPVQLIGGEQTLFAVTADGKLYATGYGAG 4016
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4017 GRLGVGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4074
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L G A G S VT G + +WG G GRLGH
Sbjct: 4075 HGNRSP--CDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4129
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4130 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H SE G++ TW G + GQLG G
Sbjct: 4244 QVQG-LQGKKVIAIATGSLHCVCCSEDGEVYTW------------GDNDEGQLGDGTTNA 4290
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4291 IQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG---- 3283
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3284 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPSALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 148/353 (41%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV A G GD A+ ++ G++
Sbjct: 596 MLVAGLKGLKVIDVACG---------------SGD-------------AQTLAVTENGQV 627
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG G
Sbjct: 628 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 686
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 687 NQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 3056
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3057 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3095
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3096 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3142
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTL 3167
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 4011
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4012 GYGAGGRLGVGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4054
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4055 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTE 4094
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4095 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4141
Query: 381 GENVKALQVSCG 392
+ + + V+CG
Sbjct: 4142 LQGHRVVDVACG 4153
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
[Equus caballus]
Length = 4840
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + L +A GGAH+ +T G +Y G +G+
Sbjct: 4069 WGEAEDGKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4128
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4129 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4186
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4187 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4243
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4244 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4274
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4275 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVPALQGKKVNRVACGSAHTLAWSTS 4325
Query: 340 KILTWG 345
K + G
Sbjct: 4326 KPASAG 4331
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3134
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3135 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3192
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3193 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3249
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH C+
Sbjct: 3250 -------RKPQVVEGLRGKKIVHVAVGALH--CL-------------------------- 3274
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
++ G++Y WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3275 --AVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3327
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3963 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4020
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4021 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4078
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4079 HGNRSP--CDRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4133
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4134 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4187
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4188 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4247
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4248 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4294
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4295 IQRPRLVPALQGKKVNRVACGSAHTLA 4321
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 143/304 (47%), Gaps = 50/304 (16%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
VVQ++ G A+TV+G++Y G+ +NG+LGLG + V PIP +V LS K+ A+
Sbjct: 2998 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTV-PIPRQVTALSSYVVKKVAV 3056
Query: 185 --GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
G + A+T GKV SWG G G+LGH F R + PRLI+ L+ +++
Sbjct: 3057 HSGGRHATALTVDGKVFSWGEGDDGKLGH--------FSRMNCD-KPRLIEALKTKRIRD 3107
Query: 243 AAAGFLHSACIDENGRVYIFG-----------------DRAVDKMLFQE-------GNHA 278
A G HSA + +G +Y +G + V +L A
Sbjct: 3108 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3167
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
+ +L G +++WG + G LG G + + P+ ++ + V Q+ CG + + A+++
Sbjct: 3168 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER-LNGQGVCQIECGAQFSLALTK 3226
Query: 339 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
G + TWG G +LGHG+DV P +V K + V+ G H
Sbjct: 3227 SGVVWTWGKGDYF------------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCL 3274
Query: 398 ALLE 401
A+ +
Sbjct: 3275 AVTD 3278
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +++ L VV+ + +G H
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQVTALSSYVVKKVAVHSGGRH 3062
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3063 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3120
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3121 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3231
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3232 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG---- 3286
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3287 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 112/228 (49%), Gaps = 19/228 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
++G+LG SE+ + + GLK V +G + A+T +G+++ WG G+L
Sbjct: 579 GNYGRLGHGSSEDEAVPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKL 638
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 639 GRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 696
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 697 HV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + +P+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAVPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPSALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 148/353 (41%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAVP 595
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV A G GD A+ ++ G++
Sbjct: 596 MLVAGLKGLKVIDVACG---------------SGD-------------AQTLAVTENGQV 627
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG G
Sbjct: 628 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 686
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 687 NQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 96/229 (41%), Gaps = 50/229 (21%)
Query: 165 IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
I +P+ E LS + Q A G + AVT GKV + G +GRLG G S +
Sbjct: 2984 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI---- 3039
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
PR + L VK A +HS G HA +L
Sbjct: 3040 ----PRQVTALSSYVVKKVA---VHSG-----------------------GRHAT--ALT 3067
Query: 285 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILT 343
G++++WG ++G LG S P ++ + ++CG H+AA+ S G++ T
Sbjct: 3068 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYT 3126
Query: 344 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
WG G G+LGHG++ + P +V + +QV+CG
Sbjct: 3127 WGLG------------EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3163
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3958 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4015
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4016 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4058
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4059 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 4098
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4099 LVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4145
Query: 381 GENVKALQVSCG 392
+ + + V+CG
Sbjct: 4146 LQGHRVVDVACG 4157
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
WG GD RLG G+ E P + + + +A G H L LTE V++ G ND
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
F L +++ EP + GL K +V I+ G S A
Sbjct: 742 HFDTLRVTKP-----EPSALPGLDTKHIVGIACGPAQSFA 776
>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Nomascus leucogenys]
Length = 4530
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 3759 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 3818
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 3819 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 3876
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 3877 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3933
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 3934 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 3964
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 3965 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4015
Query: 340 KILTWG 345
K + G
Sbjct: 4016 KPASAG 4021
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 2767 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2826
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 2827 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2884
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 2885 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2941
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 2942 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 2975
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 2976 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3019
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3653 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3710
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3711 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3768
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 3769 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 3823
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 3824 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3877
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 3878 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3937
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 3938 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 3984
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 3985 IQRPRLVAALQGKKVNRVACGSAHTLA 4011
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2695 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 2754
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 2755 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 2812
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 2813 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2863
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 2864 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2923
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 2924 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 2978
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 2979 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3019
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2649 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2706
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 2707 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 2751
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 2752 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 2790
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 2791 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 2837
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 2838 PKMVKVLLGHRVIQVACGSRDAQTL 2862
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 84/197 (42%), Gaps = 39/197 (19%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 397 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 445
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 446 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 501
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 502 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 549
Query: 230 RLIKELEGVKVKIAAAG 246
L+ L+G+KV A G
Sbjct: 550 MLVAGLKGLKVIDVACG 566
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3648 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3705
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 3706 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 3748
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 3749 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 3788
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 3789 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 3835
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 3836 LQGHRVVDIACG 3847
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 63/121 (52%), Gaps = 10/121 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 459 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 517
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 518 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 575
Query: 193 T 193
T
Sbjct: 576 T 576
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 16/115 (13%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHTAAIS- 337
+L + GE+Y+WG + G LG G L P+ + G + V ++CG ++AAI+
Sbjct: 464 ALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 523
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
EG++ TWG G G+LGHG+ D P +V + +K + V+CG
Sbjct: 524 EGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 566
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 474 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 532
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV 140
++G+LG + ++ P+ ++GLK +V+ ++ G + + V
Sbjct: 533 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAV 575
>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 3660
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 2899 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGR 2958
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 2959 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRG- 3016
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P KV+ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 3017 -GSDGCKVPMKVDALTGLGAVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3073
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 3074 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 3104
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 3105 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 3155
Query: 340 KILTWG 345
K + G
Sbjct: 3156 KPASAG 3161
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 1906 WGEGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALTSSGELYTWGLGEYGR 1965
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L VVQ++ G + A+T +G ++ WG G+LG G
Sbjct: 1966 LGHGDNT-TQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2023
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ +P +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 2024 -GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2080
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH C+
Sbjct: 2081 -------RKPQVVEGLRGKKIVHVAVGALH--CL-------------------------- 2105
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
++ G++Y WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 2106 --AVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 2158
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 166/386 (43%), Gaps = 57/386 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P C A L GG TLF +T G +YATG G
Sbjct: 2793 WGHNHRGQLGGVEGAKVKVPTPCEALAALRPAQL-IGGEQTLFAVTADGKLYATGYGAGG 2851
Query: 102 QLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 2852 RLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 2909
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 2910 GNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSD---- 2963
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L+G +V A +G + C+ E+ V+ +GD K+
Sbjct: 2964 -----SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGGS 3018
Query: 276 NHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + P +L G +YTWG + LG GS D + P +
Sbjct: 3019 DGCKVPMKVDALTGLGAVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 3078
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 3079 VQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNAI 3125
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 3126 QRPRLVAALQGKKVNRVACGSAHTLA 3151
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 162/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +++ L VV+ + +G H
Sbjct: 1834 GGSKSLFAVTVEGKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRH 1893
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+T DG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 1894 ATALTADGKVFSWGEGDDGKLGHFSRXN--CDKPRLIEALKSRRIRDIACGSSHSAALTS 1951
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 1952 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLVGHRVVQVACGSRDAQTLA 2002
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 2003 LTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2062
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 2063 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG---- 2117
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 2118 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2158
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 142/335 (42%), Gaps = 53/335 (15%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
+G VY G N GQLG E + P L Q+ G A+T DG+LY
Sbjct: 2787 SGTVYGWGHNHRGQLGGVEGAKVKV-PTPCEALAALRPAQLIGGEQTLFAVTADGKLYAT 2845
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGG 205
G + G+ LG + + PT +E + +F K+ A+ G + +A++ G+V SWG
Sbjct: 2846 GYGAGGR--LGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 2903
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 2904 DGKLGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKG 2954
Query: 266 AVDKMLFQEGNHARRPSLISGGE------------------------LYTWGSNENGCLG 301
++ + +P L+ + +++WG + G LG
Sbjct: 2955 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLG 3014
Query: 302 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSS 360
G D P +V V +V CG + + A+++ G + TWG G H
Sbjct: 3015 RGGSDGCKVPMKVDALTGLGAV-KVECGSQFSVALTKSGAVYTWGKGDYH---------- 3063
Query: 361 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
+LGHG+D P V + K + ++ G H
Sbjct: 3064 --RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 3096
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 115/258 (44%), Gaps = 52/258 (20%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 1788 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNAVQVAGGSKSLFAVTVE 1845
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR + L VK A +HS
Sbjct: 1846 GKVYACGEATNGRLGLGVSSGTVP--------VPRQVTALSSYVVKKVA---VHSG---- 1890
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L + G++++WG ++G LG S P ++
Sbjct: 1891 -------------------GRHAT--ALTADGKVFSWGEGDDGKLGHFSRXNCDKPRLIE 1929
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 1930 A-LKSRRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 1976
Query: 375 PTIVNFGENVKALQVSCG 392
P +V + +QV+CG
Sbjct: 1977 PKMVKVLVGHRVVQVACG 1994
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 87/217 (40%), Gaps = 33/217 (15%)
Query: 194 GGGKVLSWGAGGSGRLG--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
G G V WG G+LG G + + + + P + E + A G L++
Sbjct: 2786 GSGTVYGWGHNHRGQLGGVEGAKVKVPTPCEALAALRPAQLIGGEQTLFAVTADGKLYAT 2845
Query: 252 CIDENGRVYIFGDRAVDKMLFQE---------------GNHARRPSLISGGELYTWGSNE 296
GR+ I G +V E G H +L S GE+Y+WG E
Sbjct: 2846 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCL--ALSSEGEVYSWGEAE 2903
Query: 297 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSE 355
+G LG G+ P ++ VD V+ G H+A ++ G + TWG G
Sbjct: 2904 DGKLGHGNRSPCDRPRVIESLRGIEVVD-VAAGGAHSACVTAAGGLYTWGKG-------- 2954
Query: 356 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
G+LGH + D + P +V + + + V+CG
Sbjct: 2955 ----RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACG 2987
>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pongo abelii]
Length = 4581
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 3810 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 3869
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 3870 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 3927
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 3928 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3984
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 3985 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4015
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4016 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4066
Query: 340 KILTWG 345
K + G
Sbjct: 4067 KPASAG 4072
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3704 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3761
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3762 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3819
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 3820 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 3874
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 3875 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3928
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 3929 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3988
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 3989 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4035
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4036 IQRPRLVAALQGKKVNRVACGSAHTLA 4062
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 136/297 (45%), Gaps = 50/297 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 2824 WGEGDDGKLGHFSR----MPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2879
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ G ++G G
Sbjct: 2880 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSLGDGDLWKIGPGP 2938
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ K IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 2939 E-VKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2995
Query: 220 FLRSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P++++ L G K V + +G LH + ++G+VY
Sbjct: 2996 -------RKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQVY------------------ 3030
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3031 ------------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3074
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 148/353 (41%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV A G GD A+ ++ G++
Sbjct: 595 MLVAGLKGLKVIDVACG---------------SGD-------------AQTLAVTENGQV 626
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG G
Sbjct: 627 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 685
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 686 NQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 154/352 (43%), Gaps = 59/352 (16%)
Query: 79 GGAHTLF-LTETGCVYATG-LNDFGQLGISENIGYSLEPL-RISGLKKEVVQ---ISTGY 132
GG+ +LF +T G VYA G + G+ + G P I+ L VV+ + +G
Sbjct: 2750 GGSKSLFAVTVEGKVYACGEATKWPAWGLGISSGTVPIPHGXITALSSYVVKKVAVHSGT 2809
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ VDG+++ WG+ +G+LG + +P +E L + A G S A+
Sbjct: 2810 SQTGFXPVDGKVFSWGEGDDGKLGHFSR------MPRLIEALKTKRIRDIACGSSHSAAL 2863
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHS 250
T G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 2864 TSSGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQT 2914
Query: 251 ACIDENGRVYIFGD------------------RAVDKMLFQ-----EGNHARRPSLISGG 287
+ + G V+ GD + ++++ Q E +L G
Sbjct: 2915 LALTDEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2974
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGW 346
++TWG + LG GS + P+ V+G + V G H A+++ G++ WG
Sbjct: 2975 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQVYAWG- 3033
Query: 347 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3034 --------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3074
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3699 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3756
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 3757 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 3799
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 3800 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 3839
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 3840 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 3886
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 3887 LQGHRVVDIACG 3898
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 99/243 (40%), Gaps = 48/243 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ +++ WG N QLG G K K I +P+ E LS + Q A G + AVT
Sbjct: 2704 SAATIRTKVFSWGLNDKDQLG-GLKNKK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2761
Query: 196 GKVLS------WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
GKV + W A G G + G G + + S Y VK +G
Sbjct: 2762 GKVYACGEATKWPAWGLG-ISSGTVPIPHGXITALSSYV---------VKKVAVHSGTSQ 2811
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI----------------------SGG 287
+ +G+V+ +G+ K+ G+ +R P LI S G
Sbjct: 2812 TGFXPVDGKVFSWGEGDDGKL----GHFSRMPRLIEALKTKRIRDIACGSSHSAALTSSG 2867
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTW 344
ELYTWG E G LG G P+ V+ V QV+CG + A EG + +
Sbjct: 2868 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSL 2926
Query: 345 GWG 347
G G
Sbjct: 2927 GDG 2929
>gi|348563524|ref|XP_003467557.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Cavia
porcellus]
Length = 1016
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 143/312 (45%), Gaps = 42/312 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG S +P A + ++CG H+L + G V+A G+ GQL
Sbjct: 54 GDNSGGQLGRRGAPSGKQPEPIQALVNLPVDLVSCGKEHSLAVCHKGKVFAWGVGSDGQL 113
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G + P +I L +++QIS GY+HS A++ DG+++ WGKNS+GQLGLG++
Sbjct: 114 GTGKFEEICFIPQKIKALTGIKIIQISCGYYHSLALSKDGQVFSWGKNSHGQLGLGQEFP 173
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG +G+L + ++
Sbjct: 174 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGNNSAGQLAFSGNNVLV---- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y PR + L+ + V + G+ H+A + +N +V+ FGD
Sbjct: 229 --QSYKPRSVGALKNLGVVYISCGYEHTAVLTQNDQVFTFGD------------------ 268
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGK 340
N G LG + P+ V+G PV Q+ CG HT A + G+
Sbjct: 269 ------------NSFGQLGHNGVSQTTGPQLVEG--IGGPVSQIDCGSYHTLAYVYTTGQ 314
Query: 341 ILTWGWGGSHGT 352
++++G SH +
Sbjct: 315 VVSFGREPSHTS 326
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 127/281 (45%), Gaps = 56/281 (19%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
++Q ++G H+ + + ++ G NS GQ LG++ A P ++ L + +
Sbjct: 31 LLQAASGERHALLLLTNQVVHACGDNSGGQ--LGRRGAPSGKQPEPIQALVNLPVDLVSC 88
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E S+AV GKV +WG G G+LG G+ I + P+ IK L G+K+ +
Sbjct: 89 GKEHSLAVCHKGKVFAWGVGSDGQLGTGKFEEIC--------FIPQKIKALTGIKIIQIS 140
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG- 303
G+ HS + ++G+V ++WG N +G LG+G
Sbjct: 141 CGYYHSLALSKDGQV------------------------------FSWGKNSHGQLGLGQ 170
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
SP+RV+ P+ QV+ G H+ A+S ++GW G++S GQ
Sbjct: 171 EFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGT-SFGW----------GNNSAGQ 218
Query: 364 LGH-GND--VDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
L GN+ V P V +N+ + +SCG+ HT L +
Sbjct: 219 LAFSGNNVLVQSYKPRSVGALKNLGVVYISCGYEHTAVLTQ 259
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 107/243 (44%), Gaps = 21/243 (8%)
Query: 43 WGNGDYGRLGLGSLESR-WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG G E + P A + ++CG H+L L++ G V++ G N G
Sbjct: 105 WGVGSDGQLGTGKFEEICFIPQKIKALTGIKIIQISCGYYHSLALSKDGQVFSWGKNSHG 164
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQL
Sbjct: 165 QLGLGQEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGNNSAGQLAFSGN 224
Query: 161 AAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
V P V L + + G+E + +T +V ++G G+LGH S G
Sbjct: 225 NVLVQSYKPRSVGALKNLGVVYISCGYEHTAVLTQNDQVFTFGDNSFGQLGHNGVSQTTG 284
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+L++ + G +I + A + G+V FG +E +H
Sbjct: 285 ---------PQLVEGIGGPVSQIDCGSYHTLAYVYTTGQVVSFG---------REPSHTS 326
Query: 280 RPS 282
P+
Sbjct: 327 NPT 329
>gi|297850954|ref|XP_002893358.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297339200|gb|EFH69617.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 388
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 171/383 (44%), Gaps = 53/383 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG L+ P + S S+ LACGGAH + LT G V+ G GQ
Sbjct: 20 WGAGTDGQLGTAKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSDGKVFTWGRGSSGQ 79
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + +L P +S V+ Q + G+ HS ++ G L+ G S GQLG G
Sbjct: 80 LGHGDILNITL-PKLVSFFDGYVITQAAAGWSHSGFVSDSGCLFTCGNGSFGQLGHGDNM 138
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ + P KV S K A G S+ + G +V +G+G G+LG + +
Sbjct: 139 S--LRTPAKVSYFSNESVKMVACGMRHSLVLLAGNQVCGFGSGKRGQLGFTSDGT----- 191
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------DRAVDKML--- 271
S P ++ L+ V+V +A HSA I +G+ + +G D + L
Sbjct: 192 --KSVNLPCVVSGLKDVEVTRISANGDHSAAISADGQFFSWGRGFCAGPDVQTPQCLPSS 249
Query: 272 --FQEG----NHARRPSLISGGELYTWGSN-----ENGCLGIGSIDVLHSPERVQGPFSE 320
F++ NHA L GE++ G+ E L I S + L + F
Sbjct: 250 LSFRKVAVGWNHALL--LTVDGEVFKLGNTLNKQPEKQQLQIDSSEALLAKVS---DFDG 304
Query: 321 SPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
V Q++ G +H+AA++E GK+ TWGWG GQLG GN D P +V+
Sbjct: 305 VKVLQIAAGAEHSAAVTENGKVKTWGWG------------EHGQLGLGNTNDQTSPQLVS 352
Query: 380 FGE---NVKALQVSCGFNHTGAL 399
G K ++V CG T A+
Sbjct: 353 VGSIDLRTKEIKVYCGSGFTYAV 375
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 107/230 (46%), Gaps = 37/230 (16%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+++ WG ++GQLG K +++P + L I A G +A+T GKV +WG
Sbjct: 16 QVWSWGAGTDGQLGTAKLQDELLPQLLSLTSLPSI--SMLACGGAHVIALTSDGKVFTWG 73
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G SG+LGHG +I P+L+ +G + AAAG+ HS + ++G ++
Sbjct: 74 RGSSGQLGHGDILNI---------TLPKLVSFFDGYVITQAAAGWSHSGFVSDSGCLFTC 124
Query: 263 GDRAVDKMLFQEGNHARRPS----------------------LISGGELYTWGSNENGCL 300
G+ + ++ + R P+ L++G ++ +GS + G L
Sbjct: 125 GNGSFGQLGHGDNMSLRTPAKVSYFSNESVKMVACGMRHSLVLLAGNQVCGFGSGKRGQL 184
Query: 301 GIGS--IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 347
G S ++ P V G + V ++S H+AAIS +G+ +WG G
Sbjct: 185 GFTSDGTKSVNLPCVVSG-LKDVEVTRISANGDHSAAISADGQFFSWGRG 233
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 82/205 (40%), Gaps = 53/205 (25%)
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+V SWGAG G+LG + E P+L+ + + A G H + +
Sbjct: 16 QVWSWGAGTDGQLGTA---------KLQDELLPQLLSLTSLPSISMLACGGAHVIALTSD 66
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
G+V+ TWG +G LG G I + P+ V
Sbjct: 67 GKVF------------------------------TWGRGSSGQLGHGDILNITLPKLVSF 96
Query: 317 PFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
F + Q + GW H+ +S+ G + T G +G+F GQLGHG+++ P
Sbjct: 97 -FDGYVITQAAAGWSHSGFVSDSGCLFTCG----NGSF--------GQLGHGDNMSLRTP 143
Query: 376 TIVNFGENVKALQVSCGFNHTGALL 400
V++ N V+CG H+ LL
Sbjct: 144 AKVSYFSNESVKMVACGMRHSLVLL 168
>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
member 6 [Xenopus laevis]
gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
Length = 1028
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 147/337 (43%), Gaps = 47/337 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G YG+LG SR + S+ E ++ ++CG H++ + + G +Y+ G GQL
Sbjct: 59 GQNPYGQLGRKGNNSRIEQI--SSLEAQTIVDVSCGTNHSVAMCDEGNIYSWGDGSEGQL 116
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G + + P RI+GL ++++QIS G HS A+ DG ++ WG+N GQLGLG +
Sbjct: 117 GTGKFSSKNFTPKRITGLLNRKIIQISCGNFHSVALAEDGRVFSWGQNKCGQLGLGSQII 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P V+ L GI Q G Q+ A++ G V +WG +G+LG ++
Sbjct: 177 NQ-ATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQLGFKNDA------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ P + L + V + G H+A ++++G VY FGD ++ Q GN P
Sbjct: 229 KKGTFKPYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLGQQSGNQTSVPQ 288
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA--AISEGK 340
I E Y+ V QV+CG HT + +
Sbjct: 289 KI---EEYS-----------------------------RQVSQVACGRYHTLLYVFTCNR 316
Query: 341 ILTWGWGG--SHGTFSEDGHSSGGQLGHGNDVDYIHP 375
I+++G G G + QL D+ + P
Sbjct: 317 IVSFGKGSQRQQGNDESSDQAEASQLPSAFDISSLVP 353
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 111/283 (39%), Gaps = 51/283 (18%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG N GQL + ++ +V+ ++ ++G + S+ + G +LS G
Sbjct: 1 MYCWGDNCFGQLAVLEEEKEVVHFKENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSCGQ 60
Query: 204 GGSGRLGH-GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G+LG G S I I LE + + G HS + + G +Y +
Sbjct: 61 NPYGQLGRKGNNSRI------------EQISSLEAQTIVDVSCGTNHSVAMCDEGNIYSW 108
Query: 263 GDRAVDKM---LFQEGNHARRP--------------------SLISGGELYTWGSNENGC 299
GD + ++ F N + +L G +++WG N+ G
Sbjct: 109 GDGSEGQLGTGKFSSKNFTPKRITGLLNRKIIQISCGNFHSVALAEDGRVFSWGQNKCGQ 168
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGH 358
LG+GS + + ++ P+ QV+ G T A+S G + W G
Sbjct: 169 LGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAW------------GR 216
Query: 359 SSGGQLGHGNDVD--YIHPTIVNFGENVKALQVSCGFNHTGAL 399
++ GQLG ND P V+ ++ +SCG HT L
Sbjct: 217 NNAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHTAVL 259
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 55/121 (45%), Gaps = 17/121 (14%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 341
L+ G L + G N G LG + E++ +++ VD VSCG H+ A+ EG I
Sbjct: 49 LLKDGTLLSCGQNPYGQLGRKGNN--SRIEQISSLEAQTIVD-VSCGTNHSVAMCDEGNI 105
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGN-DVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
+WG G S GQLG G P + N K +Q+SCG H+ AL
Sbjct: 106 YSWGDG------------SEGQLGTGKFSSKNFTPKRITGLLNRKIIQISCGNFHSVALA 153
Query: 401 E 401
E
Sbjct: 154 E 154
>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
mulatta]
Length = 4840
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4094 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4153
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4154 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4211
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4212 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4268
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4269 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4299
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4300 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4350
Query: 340 KILTWG 345
K + G
Sbjct: 4351 KPASAG 4356
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 3279
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3280 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3323
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3988 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4045
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4046 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4103
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4104 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4158
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4159 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4212
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4213 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4272
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4273 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4319
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4320 IQRPRLVAALQGKKVNRVACGSAHTLA 4346
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3282
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3283 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 148/353 (41%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV A G GD A+ ++ G++
Sbjct: 595 MLVAGLKGLKVIDVACG---------------SGD-------------AQTLAVTENGQV 626
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG G
Sbjct: 627 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 685
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 686 NQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 3055
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3056 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3094
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3095 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3141
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTL 3166
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3983 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4040
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4041 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4083
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4084 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 4123
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4124 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4170
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 4171 LQGHRVVDIACG 4182
>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4829
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4058 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4117
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4118 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4175
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4176 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4232
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4233 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4263
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4264 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4314
Query: 340 KILTWG 345
K + G
Sbjct: 4315 KPASAG 4320
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3066 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3125
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3126 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3183
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3184 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3240
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 3241 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 3274
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3275 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3318
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3952 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4009
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4010 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4067
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4068 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4122
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4123 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4176
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4177 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4236
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4237 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4283
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4284 IQRPRLVAALQGKKVNRVACGSAHTLA 4310
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2994 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3053
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3054 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3111
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3112 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3162
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3163 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3222
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3223 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3277
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3278 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3318
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 148/353 (41%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV A G GD A+ ++ G++
Sbjct: 595 MLVAGLKGLKVIDVACG---------------SGD-------------AQTLAVTENGQV 626
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG G
Sbjct: 627 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 685
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 686 NQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2948 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3005
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 3006 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 3050
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3051 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3089
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3090 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3136
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3137 PKMVKVLLGHRVIQVACGSRDAQTL 3161
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3947 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4004
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4005 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4047
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4048 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 4087
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4088 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4134
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 4135 LQGHRVVDIACG 4146
>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
mellifera]
Length = 1081
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 162/364 (44%), Gaps = 52/364 (14%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G LGLG +E P + ++ +ACG +T+ +T+ G +Y+ G ND+
Sbjct: 31 WGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGNNDY 90
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E L+ I GL V + + G +H+ AI G+L+ WG N+ GQLGL
Sbjct: 91 GQLG-HEKGRKRLQ--LIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNS 147
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + P V+ L Q A G + + A+T G++ SWG+ G+LG G ++
Sbjct: 148 KNF-MESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDTKY-- 204
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
E P+ I G+ + A G HS I ++G V+ +G ++ +
Sbjct: 205 ------EIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRN 258
Query: 280 RPS----------------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
P L G ++T G+ G LG GS P +V
Sbjct: 259 LPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILPRQVM-E 317
Query: 318 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
S V Q+SCG +HT A+ S G++ WG GG+ GQLG+ + P
Sbjct: 318 LMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGA------------GQLGNHSTRSVTTP 365
Query: 376 TIVN 379
+V+
Sbjct: 366 QVVH 369
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 140/339 (41%), Gaps = 81/339 (23%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI----SENIGYSLEPL 116
PV+ + H K + C G+ G+LG+ ENI L P
Sbjct: 13 EPVIAVEYPLHKKKDMFCWGSTI----------------HGELGLGGIEDENI---LIPR 53
Query: 117 RISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG--LGKKAAKVIPIPTKVEC 173
+ K E+ QI+ G +++ IT GE+Y G N GQLG G+K ++IP
Sbjct: 54 ELDFKKAAEIQQIACGENYTVVITQIGEIYSCGNNDYGQLGHEKGRKRLQLIP------G 107
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
L K+AA G ++A+ G++ SWG+ G+LG ++ + E +PR++K
Sbjct: 108 LDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFM--------ESSPRMVK 159
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWG 293
L V A G H+ + NG ELY+WG
Sbjct: 160 TLGTSVVVQIACGMKHAFALTNNG------------------------------ELYSWG 189
Query: 294 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTF 353
SN G LG+G+ + F P+ ++CG H+ AIS+ + +GWG + TF
Sbjct: 190 SNSEGQLGLGTDTKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAV-FGWGKN--TF 246
Query: 354 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
GQLG + D P + +N K +CG
Sbjct: 247 --------GQLGLNDTQDRNLPCQLQTLQNAKICYAACG 277
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 112/259 (43%), Gaps = 55/259 (21%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+++ WG +G+LGLG + I IP +++ +Q A G +V +T G++ S G
Sbjct: 27 DMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCG 86
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G+LGH + L +LI L+ K AA G H+ I+E
Sbjct: 87 NNDYGQLGHEKGRKRL-----------QLIPGLDAFVFKKAACGAYHTLAINE------- 128
Query: 263 GDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
G+L++WGSN G LG+ S + + S R+ S
Sbjct: 129 -----------------------WGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSV 165
Query: 323 VDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY-IHPTIVNF 380
V Q++CG KH A++ G++ +W G +S GQLG G D Y I P ++
Sbjct: 166 VVQIACGMKHAFALTNNGELYSW------------GSNSEGQLGLGTDTKYEIKPKFISA 213
Query: 381 GENVKALQVSCGFNHTGAL 399
+ ++CG H+ A+
Sbjct: 214 FIGIPIAFIACGGYHSIAI 232
>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4834
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4122
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4123 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4181 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4237
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4238 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4268
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4269 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4319
Query: 340 KILTWG 345
K + G
Sbjct: 4320 KPASAG 4325
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 3279
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3280 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3323
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4242 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4288
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4289 IQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3282
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3283 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 148/353 (41%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV A G GD A+ ++ G++
Sbjct: 595 MLVAGLKGLKVIDVACG---------------SGD-------------AQTLAVTENGQV 626
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG G
Sbjct: 627 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 685
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 686 NQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 114/258 (44%), Gaps = 52/258 (20%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 3055
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3056 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3094
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3095 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3141
Query: 375 PTIVNFGENVKALQVSCG 392
P +V + +QV+CG
Sbjct: 3142 PKMVKVLLGHRVIQVACG 3159
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4010 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4052
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4053 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 4092
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4093 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4139
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 4140 LQGHRVVDIACG 4151
>gi|23503098|sp|Q92834.2|RPGR_HUMAN RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
Flags: Precursor
gi|119579846|gb|EAW59442.1| retinitis pigmentosa GTPase regulator, isoform CRA_b [Homo sapiens]
Length = 1020
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 167/354 (47%), Gaps = 57/354 (16%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL TE G VYATG N+ G
Sbjct: 58 MFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEG 117
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + + + + ++ Q+S G + S+A+T DG L+MWG NS GQ+GL K
Sbjct: 118 QLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGL--K 175
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P +V G + G+ S VT G++ +G +G+LG + +LG
Sbjct: 176 NVSNVCVPQQVTI--GKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQ--LLGN 231
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R TP+L+ E+ +++A G H+ + EN
Sbjct: 232 HR-----TPQLVSEIPEKVIQVACGG-EHTVVLTENA----------------------- 262
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-G 339
+YT+G + G LG+G+ S +V + + +SCG HTA I++ G
Sbjct: 263 --------VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIG 314
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCG 392
+ T+G G HG LG N ++ PT+ NF + L V+CG
Sbjct: 315 LMYTFG-DGRHGKLG---------LGLENFTNHFIPTLCSNFLRFIVKL-VACG 357
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 57/304 (18%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
V +S G HS+ +T + +LYM+G N+ GQLGLG K+A I PT V+ L K AA G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
++ T GG V + G G+LG G ++ F TSE+ K+
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI---------------- 284
K +AG SA + E+GR++++GD + ++ + ++ P +
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202
Query: 285 ----SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 338
+ GELY +G ENG LG+ + L R SE P V QV+CG +HT ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTG 397
+ T+G G GQLG G + + P ++ + +SCG NHT
Sbjct: 261 NAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTA 308
Query: 398 ALLE 401
+ +
Sbjct: 309 LITD 312
>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4122
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4123 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4181 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4237
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4238 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4268
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4269 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4319
Query: 340 KILTWG 345
K + G
Sbjct: 4320 KPASAG 4325
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 3279
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3280 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3323
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4242 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4288
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4289 IQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3282
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3283 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 148/353 (41%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV A G GD A+ ++ G++
Sbjct: 595 MLVAGLKGLKVIDVACG---------------SGD-------------AQTLAVTENGQV 626
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG G
Sbjct: 627 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 685
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 686 NQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 3055
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3056 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3094
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3095 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3141
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTL 3166
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4010 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4052
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4053 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 4092
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4093 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4139
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 4140 LQGHRVVDIACG 4151
>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4122
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4123 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4181 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4237
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4238 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4268
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4269 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4319
Query: 340 KILTWG 345
K + G
Sbjct: 4320 KPASAG 4325
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 3279
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3280 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3323
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4242 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4288
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4289 IQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3282
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3283 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 148/353 (41%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV A G GD A+ ++ G++
Sbjct: 595 MLVAGLKGLKVIDVACG---------------SGD-------------AQTLAVTENGQV 626
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG G
Sbjct: 627 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 685
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 686 NQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 3055
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3056 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3094
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3095 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3141
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTL 3166
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4010 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4052
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4053 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 4092
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4093 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4139
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 4140 LQGHRVVDIACG 4151
>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
Length = 4834
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4122
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4123 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4181 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4237
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4238 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4268
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4269 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4319
Query: 340 KILTWG 345
K + G
Sbjct: 4320 KPASAG 4325
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 3279
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3280 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3323
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4242 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4288
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4289 IQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3282
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3283 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 148/353 (41%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV A G GD A+ ++ G++
Sbjct: 595 MLVAGLKGLKVIDVACG---------------SGD-------------AQTLAVTENGQV 626
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG G
Sbjct: 627 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 685
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 686 NQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 3055
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3056 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3094
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3095 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3141
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTL 3166
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4010 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4052
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4053 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 4092
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4093 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4139
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 4140 LQGHRVVDIACG 4151
>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4122
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4123 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4181 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4237
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4238 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4268
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4269 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4319
Query: 340 KILTWG 345
K + G
Sbjct: 4320 KPASAG 4325
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 3279
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3280 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3323
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4242 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4288
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4289 IQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3282
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3283 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 148/353 (41%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV A G GD A+ ++ G++
Sbjct: 595 MLVAGLKGLKVIDVACG---------------SGD-------------AQTLAVTENGQV 626
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG G
Sbjct: 627 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 685
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 686 NQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 3055
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3056 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3094
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3095 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3141
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTL 3166
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4010 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4052
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4053 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 4092
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4093 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4139
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 4140 LQGHRVVDIACG 4151
>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4122
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4123 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4181 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4237
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4238 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4268
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4269 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4319
Query: 340 KILTWG 345
K + G
Sbjct: 4320 KPASAG 4325
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 3279
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3280 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3323
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4242 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4288
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4289 IQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3282
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3283 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 148/353 (41%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV A G GD A+ ++ G++
Sbjct: 595 MLVAGLKGLKVIDVACG---------------SGD-------------AQTLAVTENGQV 626
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG G
Sbjct: 627 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 685
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 686 NQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 3055
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3056 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3094
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3095 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3141
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTL 3166
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4010 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4052
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4053 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 4092
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4093 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4139
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 4140 LQGHRVVDIACG 4151
>gi|6522549|emb|CAB61992.1| putative protein [Arabidopsis thaliana]
Length = 951
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 159/369 (43%), Gaps = 72/369 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF-- 100
WG GRLG G P + F +++ CG HT +T +G +YA G D
Sbjct: 320 WGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNA 379
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG+ + +P+RI G + V IS G H++ +T +G+L+ +G + G LG G
Sbjct: 380 GLLGLGSGASH-WKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHG 438
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-------TGGGKVLSWGAGGSGRLGH 211
+ + IP +VE L+G T +AA G S AV T GK+ +WG G GRLGH
Sbjct: 439 DRIS--TNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGH 496
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G L P + EL+ + A G + + +G+VY G
Sbjct: 497 GDIECRL---------IPSCVTELDTTSFQQVACGQSITVALSMSGQVYAMG-------- 539
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 331
S D++ +P ++G +S V +V+CG+
Sbjct: 540 ----------------------------TADPSHDIVRAPSCIEGGLGKSFVQEVACGFH 571
Query: 332 HTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 390
H A + S+ ++ TWG G S GQLGHG+ PT+V + + +V
Sbjct: 572 HIAVLNSKAEVYTWGKG------------SNGQLGHGDTEYRCMPTLVKALKGKQVRKVV 619
Query: 391 CGFNHTGAL 399
CG N+T +
Sbjct: 620 CGSNYTATI 628
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 99/235 (42%), Gaps = 50/235 (21%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P ++ + + + G +V VT G++ SWG GRLGHG S +
Sbjct: 286 LPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPH------- 338
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
P+LI E G V++A G H+ + +G +Y +GD
Sbjct: 339 --PKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGD---------------------- 374
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 345
G + G LG+GS P R+ G V +SCG HTA + SEGK+ T+G
Sbjct: 375 ------GDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFG 428
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
GTF G LGHG+ + P V + ++ +CG H+ A++
Sbjct: 429 ----DGTF--------GALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVV 471
>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4122
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4123 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4181 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4237
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4238 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4268
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4269 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4319
Query: 340 KILTWG 345
K + G
Sbjct: 4320 KPASAG 4325
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 3279
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3280 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3323
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4242 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4288
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4289 IQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3282
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3283 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 148/353 (41%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV A G GD A+ ++ G++
Sbjct: 595 MLVAGLKGLKVIDVACG---------------SGD-------------AQTLAVTENGQV 626
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG G
Sbjct: 627 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 685
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 686 NQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 3055
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3056 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3094
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3095 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3141
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTL 3166
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4010 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4052
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4053 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 4092
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4093 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4139
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 4140 LQGHRVVDIACG 4151
>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4834
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4122
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4123 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4181 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4237
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4238 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4268
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4269 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4319
Query: 340 KILTWG 345
K + G
Sbjct: 4320 KPASAG 4325
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 3279
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3280 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3323
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4242 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4288
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4289 IQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3282
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3283 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 148/353 (41%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV A G GD A+ ++ G++
Sbjct: 595 MLVAGLKGLKVIDVACG---------------SGD-------------AQTLAVTENGQV 626
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG G
Sbjct: 627 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 685
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 686 NQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 114/258 (44%), Gaps = 52/258 (20%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 3055
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3056 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3094
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3095 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3141
Query: 375 PTIVNFGENVKALQVSCG 392
P +V + +QV+CG
Sbjct: 3142 PKMVKVLLGHRVIQVACG 3159
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4010 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4052
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4053 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 4092
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4093 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4139
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 4140 LQGHRVVDIACG 4151
>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
Length = 1871
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 139/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 1100 WGEAKDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 1159
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 1160 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 1217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 1218 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 1274
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 1275 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 1305
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 1306 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 1356
Query: 340 KILTWG 345
K + G
Sbjct: 1357 KPASAG 1362
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 142/304 (46%), Gaps = 46/304 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 107 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 166
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 167 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 224
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 225 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 281
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 282 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 315
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
WG N++G G G+ V P VQG + +V+CG H+ A +
Sbjct: 316 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 363
Query: 340 KILT 343
+ T
Sbjct: 364 DVAT 367
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 153/333 (45%), Gaps = 50/333 (15%)
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
GLND QLG + + + VVQ++ G A+TV+G++Y G+ +NG+L
Sbjct: 1 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRL 60
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
GLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+LGH
Sbjct: 61 GLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGH-- 117
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---------- 263
F R + PRLI+ L+ +++ A G HSA + +G +Y +G
Sbjct: 118 ------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 170
Query: 264 -------DRAVDKMLFQE-------GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
+ V +L A+ +L G +++WG + G LG G + +
Sbjct: 171 DNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 230
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
P+ ++ + V Q+ CG + + A+++ G + TWG G +LGHG+
Sbjct: 231 IPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RLGHGS 277
Query: 369 DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
DV P +V K + V+ G H A+ +
Sbjct: 278 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 310
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 994 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 1051
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 1052 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAKDGKLG 1109
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 1110 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 1164
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 1165 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 1218
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 1219 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 1278
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 1279 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 1325
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 1326 IQRPRLVAALQGKKVNRVACGSAHTLA 1352
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VY+ G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 35 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 94
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 95 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 152
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 153 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 203
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 204 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 263
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 264 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 318
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 319 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 359
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 126/332 (37%), Gaps = 101/332 (30%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 989 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 1047
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 1048 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDGK 1107
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 1108 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 1158
Query: 269 KMLFQEGNHARRPSLISGGE------------------------LYTWGSNENGCLGIGS 304
++ + +P L+ + +++WG + G LG G
Sbjct: 1159 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 1218
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 363
D P ++ + V +V CG + + A+++ G + TWG G H +
Sbjct: 1219 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 1265
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
LGHG+D P V + K + ++ G H
Sbjct: 1266 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 1297
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 87/217 (40%), Gaps = 33/217 (15%)
Query: 194 GGGKVLSWGAGGSGRLG--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
G G + WG G+LG G + + + + P + E + A G L++
Sbjct: 987 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 1046
Query: 252 CIDENGRVYIFGDRAVDKMLFQE---------------GNHARRPSLISGGELYTWGSNE 296
GR+ I G +V E G H +L S GE+Y+WG +
Sbjct: 1047 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCL--ALSSEGEVYSWGEAK 1104
Query: 297 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSE 355
+G LG G+ P ++ VD V+ G H+A ++ G + TWG G
Sbjct: 1105 DGKLGHGNRSPCDRPRVIESLRGIEVVD-VAAGGAHSACVTAAGDLYTWGKG-------- 1155
Query: 356 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
G+LGH + D + P +V + + + ++CG
Sbjct: 1156 ----RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG 1188
>gi|348534545|ref|XP_003454762.1| PREDICTED: hypothetical protein LOC100691941 [Oreochromis
niloticus]
Length = 1536
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 154/334 (46%), Gaps = 69/334 (20%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
+ACG HT +TE G ++ G N++GQLG+ + + +P + LK E VQ ++ G +H
Sbjct: 41 IACGDEHTALITENGKLFMFGSNNWGQLGLGSKVTVN-KPTCVKALKSEKVQLVACGRNH 99
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT----KQAALGFEQSV 190
+ T G++Y G NS GQLGLG + T + L + K A G S
Sbjct: 100 TLICTAKGKVYASGGNSEGQLGLGDCEER-----TSFKRLDFFDSQGPIKMLAAGSNTSA 154
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T GK+ WG G++G G+ES + +P+ + G + + G+ HS
Sbjct: 155 ALTVSGKLFMWGDNTEGQIGLGKESQV---------SSPQEVSV--GQPISWVSCGYYHS 203
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVL-- 308
A + VD G LYT+G ++G LG+G+ +
Sbjct: 204 ALV------------TVD------------------GALYTFGERDSGKLGLGTHQLPGH 233
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
P+ V+ + PV QV+CG HT A++EG + T+G G GQLGHG
Sbjct: 234 RVPQLVKS--IKEPVRQVACGGGHTVALAEGNVYTFGLG------------QFGQLGHGT 279
Query: 369 DV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ + P +V + +A QV CG NHT + E
Sbjct: 280 FIFESRVPRLVEHFKKGRACQVVCGENHTAVITE 313
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 164/369 (44%), Gaps = 55/369 (14%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++LK DI L G + + + F ++G+ ++G+LGLGS + +P A +
Sbjct: 29 SKFWLKNDIPLRIACGDEHTALITENGKLF--MFGSNNWGQLGLGSKVTVNKPTCVKALK 86
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQI 128
++ +ACG HTL T G VYA+G N GQLG+ + S + L + + +
Sbjct: 87 SEKVQLVACGRNHTLICTAKGKVYASGGNSEGQLGLGDCEERTSFKRLDFFDSQGPIKML 146
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
+ G + S+A+TV G+L+MWG N+ GQ+GLGK++ + + E G + G+
Sbjct: 147 AAGSNTSAALTVSGKLFMWGDNTEGQIGLGKESQ----VSSPQEVSVGQPISWVSCGYYH 202
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G + ++G SG+LG LG + P+L+K ++ V+ A G
Sbjct: 203 SALVTVDGALYTFGERDSGKLG-------LGTHQLPGHRVPQLVKSIKE-PVRQVACGGG 254
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVL 308
H+ + E G +YT+G + G LG G+
Sbjct: 255 HTVALAE-------------------------------GNVYTFGLGQFGQLGHGTFIFE 283
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
R+ F + QV CG HTA I+E +L G HG LG N
Sbjct: 284 SRVPRLVEHFKKGRACQVVCGENHTAVITEDGLLYTFGDGRHGKLG---------LGEEN 334
Query: 369 DVDYIHPTI 377
+ PT+
Sbjct: 335 FTNQFKPTL 343
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + ++++P +C F K++++ CGG H + L
Sbjct: 320 FGDGRHGKLGLGEENFTNQFKPTLCLRFLKYNVQGAMCGGCHMVVL 365
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 13/73 (17%)
Query: 325 QVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 383
+++CG +HTA I+E GK+ +G ++ GQLG G+ V PT V ++
Sbjct: 40 RIACGDEHTALITENGKLFMFG------------SNNWGQLGLGSKVTVNKPTCVKALKS 87
Query: 384 VKALQVSCGFNHT 396
K V+CG NHT
Sbjct: 88 EKVQLVACGRNHT 100
>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
Length = 4625
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 144/320 (45%), Gaps = 40/320 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG+ E+ PV H +K + GG H+L +T G V++ G G
Sbjct: 2927 GEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGIDG 2986
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG ++ L P I L+ K +V+I+ G HS+A+T DGELY WG G+LG G
Sbjct: 2987 KLG-HGDVTSRLSPTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDYGRLGHGD- 3044
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+K + IP +V+ L A G Q++A+T V SWG G G+LG G
Sbjct: 3045 -SKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGG----- 3098
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S P+ I L G V A G S + G+V+ +G ++ +H
Sbjct: 3099 ----SEGCNIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGNDSHY 3154
Query: 279 RRPSLISG-----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQ 315
R P LI G GE+Y+WG N++G G G+ V P+
Sbjct: 3155 RSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQQGNGNTTVNKRPQICL 3214
Query: 316 GPFSESPVDQVSCGWKHTAA 335
G + ++CG H+ A
Sbjct: 3215 GELDGVKISHIACGSSHSIA 3234
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 186/396 (46%), Gaps = 73/396 (18%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL----ACGGAHTLFL-TETGCVYATG 96
+WG D G+LG G S+ V S E ++ AL GG+ T+F+ T G VY +G
Sbjct: 2873 VWGLNDKGQLG-GCKGSK----VKSPTEMKNIAALRPVSIAGGSKTVFIVTYDGKVYVSG 2927
Query: 97 LNDFGQLGI--SENIG--YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
G+LG+ +ENI L+ L + +KK V + G HS IT +G+++ WG+ +
Sbjct: 2928 EGANGRLGLGNTENISIPVQLDTLNMHFVKK--VTVHPGGRHSLCITREGKVFSWGEGID 2985
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
G+LG G +++ PT +E L + A G S AVT G++ +WG G GRLGHG
Sbjct: 2986 GKLGHGDVTSRL--SPTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDYGRLGHG 3043
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGD------ 264
++ + P+ +K L+ KV A G + + +N V+ +GD
Sbjct: 3044 DSKTL---------HIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKL 3094
Query: 265 -----------RAVDKMLFQEGNHARRP--------SLISGGELYTWGSNENGCLGIGSI 305
+ +D + G R +L + G+++TWG + LG G+
Sbjct: 3095 GRGGSEGCNIPQKIDALC---GRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGND 3151
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 364
SP+ ++GP + + +++ G H A+++ G++ +WG ++ H GQ
Sbjct: 3152 SHYRSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYSWG---------DNDH---GQQ 3199
Query: 365 GHGNDVDYIHPTIVNFGE--NVKALQVSCGFNHTGA 398
G+GN P I GE VK ++CG +H+ A
Sbjct: 3200 GNGNTTVNKRPQIC-LGELDGVKISHIACGSSHSIA 3234
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 175/387 (45%), Gaps = 57/387 (14%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
+WG+ G+LG PV+ A+A GG TLF LT G VYA+GL
Sbjct: 3774 VWGHNHRGQLGGVQGTKVKSPVINDIIAALRPTAVA-GGEQTLFILTSEGKVYASGLGGS 3832
Query: 101 GQLGI--SENI--GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S+NI +EPL+ LK E + + +G H+ +T + E++ WG +G+LG
Sbjct: 3833 GRLGIGRSDNIVTPVIIEPLQ--HLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLG 3890
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G K + P K+E L G + G S A+T G++ +WG G GRLGHG
Sbjct: 3891 HGDKLSS--ETPRKIEALLGKQIVHISCGSSHSAAITSKGELYTWGKGRYGRLGHGDGDD 3948
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
L P+L++ L+ KV A +G + I ++ V+ +GD K+
Sbjct: 3949 CL---------KPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGG 3999
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ ++P +L G+LYTWG + LG G+ D + P
Sbjct: 4000 SDGCKKPLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGTNDHVRRPR 4059
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+V + V+ G H A ++ G++ TWG + GQLG+G
Sbjct: 4060 KV-ACLQGKQIVTVAAGSLHCVACTDAGEVFTWG------------DNDEGQLGNGTLNP 4106
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
PT+V ENVK +V CG H+ A
Sbjct: 4107 IPEPTLVTVLENVKLNRVGCGSAHSFA 4133
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 146/316 (46%), Gaps = 55/316 (17%)
Query: 92 VYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
V+ GLND GQLG + E I+ L+ V I+ G +T DG++Y+ G+
Sbjct: 2871 VFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRP--VSIAGGSKTVFIVTYDGKVYVSGE 2928
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSG 207
+NG+LGLG + I IP +++ L+ F K+ + G S+ +T GKV SWG G G
Sbjct: 2929 GANGRLGLGN--TENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGIDG 2986
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---- 263
+LGHG TS +P LI+ LE + A G HSA + +G +Y +G
Sbjct: 2987 KLGHGD---------VTSRLSPTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDY 3037
Query: 264 ---------DRAVDKML--FQE---------GNHARRPSLISGGELYTWGSNENGCLGIG 303
+ K + Q+ A+ +L +++WG + G LG G
Sbjct: 3038 GRLGHGDSKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRG 3097
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 362
+ + P+++ V +++CG + + A+S GK+ TWG G +
Sbjct: 3098 GSEGCNIPQKIDA-LCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYY------------ 3144
Query: 363 QLGHGNDVDYIHPTIV 378
+LGHGND Y P ++
Sbjct: 3145 RLGHGNDSHYRSPQLI 3160
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 137/312 (43%), Gaps = 40/312 (12%)
Query: 62 PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
PV+ + ++ L+ GG H + LT V++ G + G+LG + + S P +I
Sbjct: 3846 PVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLS-SETPRKIE 3904
Query: 120 GLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
L K++V IS G HS+AIT GELY WGK G+LG G + P +E L
Sbjct: 3905 ALLGKQIVHISCGSSHSAAITSKGELYTWGKGRYGRLGHGDGDDCL--KPKLLEALKSYK 3962
Query: 179 TKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
A G Q++A+T V SWG G G+LG G LR I+ L
Sbjct: 3963 VIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGGSDGCKKPLR---------IESLI 4013
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS----------- 285
G+ V G S + +NG +Y +G ++ +H RRP ++
Sbjct: 4014 GMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGTNDHVRRPRKVACLQGKQIVTVA 4073
Query: 286 -----------GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
GE++TWG N+ G LG G+++ + P V +++V CG H+
Sbjct: 4074 AGSLHCVACTDAGEVFTWGDNDEGQLGNGTLNPIPEPTLVT-VLENVKLNRVGCGSAHSF 4132
Query: 335 AISEGKILTWGW 346
A S + G+
Sbjct: 4133 AWSTEAPIDIGY 4144
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 134/306 (43%), Gaps = 53/306 (17%)
Query: 62 PVVCSAFEKHSLKALACG--GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
PV+ + +K +A G H L L+ GCVY+ G D G+LG + EP +
Sbjct: 502 PVLLDSLIDIKIKKIAANVEGEHYLALSSDGCVYSWGSGDGGRLGHGD---IRREPELVK 558
Query: 120 GL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
L K++ QI+ G +S+A+T +GELY WG+ S G+LG G ++ +PT V LSG
Sbjct: 559 ELVNKKITQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRL--LPTLVAGLSGSH 616
Query: 179 TKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQES--SILGFLRSTSEYTPRLIKE 234
A G ++A+ G V SWG G G+LG G + + + + ++
Sbjct: 617 VVDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNV 676
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGS 294
L G + +A L G ++TWG
Sbjct: 677 LCGSQFSVA---------------------------------------LGKDGTVWTWGK 697
Query: 295 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWGWGGSHGTF 353
++ LG G++D + P+ V+G + VD ++ G H A+++ +I TWG
Sbjct: 698 SDGYRLGHGTLDHVRYPKMVEGLINYHIVD-IAVGPSHCLALTDNCQIFTWGSDVQKYAL 756
Query: 354 SEDGHS 359
S D ++
Sbjct: 757 SSDNYN 762
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 20/249 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G + R P + + +ACG ++ +T G +Y G +G+
Sbjct: 537 WGSGDGGRLGHGDI--RREPELVKELVNKKITQIACGSTYSAAVTSNGELYTWGRGSYGR 594
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG N L P ++GL VV ++ +G H+ AI DG ++ WG G+LG G
Sbjct: 595 LG-HGNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRG- 652
Query: 160 KAAKVIPIPTKVECLS--GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ +P VE L + G + SVA+ G V +WG RLGHG
Sbjct: 653 -GSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDGTVWTWGKSDGYRLGHGT---- 707
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
L +R P++++ L + A G H + +N +++ +G V K N+
Sbjct: 708 LDHVR-----YPKMVEGLINYHIVDIAVGPSHCLALTDNCQIFTWGS-DVQKYALSSDNY 761
Query: 278 ARRPSLISG 286
P+ IS
Sbjct: 762 NMEPTCISA 770
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 136/334 (40%), Gaps = 69/334 (20%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
+K + C + + LT G VY+ N + + + SL ++I + V G
Sbjct: 471 IKQIMCSSDNIIALTNNGRVYSLAYNARCEAPV---LLDSLIDIKIKKIAANV----EGE 523
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
H+ A++ DG +Y WG G+LG G + P V+ L Q A G S AV
Sbjct: 524 HYL-ALSSDGCVYSWGSGDGGRLGHGDIRRE----PELVKELVNKKITQIACGSTYSAAV 578
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHS 250
T G++ +WG G GRLGHG S P L+ L G V A +G H+
Sbjct: 579 TSNGELYTWGRGSYGRLGHGN---------SEDRLLPTLVAGLSGSHVVDVACGSGDAHT 629
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHS 310
ID++G V+ +WG + G LG G D
Sbjct: 630 LAIDKDGIVW------------------------------SWGDGDYGKLGRGGSDCCKV 659
Query: 311 PERVQG-PFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
P+ V+ + V CG + + A+ +G + TWG S G +LGHG
Sbjct: 660 PKVVETLKHHNKYIVNVLCGSQFSVALGKDGTVWTWG------------KSDGYRLGHGT 707
Query: 369 DVDYI-HPTIVNFGENVKALQVSCGFNHTGALLE 401
+D++ +P +V N + ++ G +H AL +
Sbjct: 708 -LDHVRYPKMVEGLINYHIVDIAVGPSHCLALTD 740
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 72/155 (46%), Gaps = 4/155 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD+G+LG G E P A + +ACG +L L+ TG V+ G D+ +
Sbjct: 3086 WGDGDFGKLGRGGSEGCNIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYR 3145
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + Y P I G KK + +I+ G H A+T GE+Y WG N +GQ G G
Sbjct: 3146 LGHGNDSHYR-SPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQQGNGNT 3204
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
P E L G+ A G S+A G
Sbjct: 3205 TVNKRPQICLGE-LDGVKISHIACGSSHSIAWCGN 3238
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 27/136 (19%)
Query: 278 ARRPSLISGG-----------ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
A RP I+GG ++Y G NG LG+G+ + + P ++ + V +V
Sbjct: 2901 ALRPVSIAGGSKTVFIVTYDGKVYVSGEGANGRLGLGNTENISIPVQLDT-LNMHFVKKV 2959
Query: 327 SC--GWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 383
+ G +H+ I+ EGK+ +WG G G+LGHG+ + PT++ E+
Sbjct: 2960 TVHPGGRHSLCITREGKVFSWGEG------------IDGKLGHGDVTSRLSPTLIEALES 3007
Query: 384 VKALQVSCGFNHTGAL 399
++++CG +H+ A+
Sbjct: 3008 KLIVEIACGSSHSAAV 3023
>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Papio anubis]
Length = 4123
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 3352 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 3411
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 3412 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 3469
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 3470 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3526
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 3527 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 3557
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 3558 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 3608
Query: 340 KILTWG 345
K + G
Sbjct: 3609 KPASAG 3614
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 2360 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2419
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 2420 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2477
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 2478 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2534
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 2535 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 2568
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 2569 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 2612
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3246 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3303
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3304 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3361
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 3362 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 3416
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 3417 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3470
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 3471 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3530
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 3531 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 3577
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 3578 IQRPRLVAALQGKKVNRVACGSAHTLA 3604
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2288 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 2347
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 2348 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 2405
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 2406 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2456
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 2457 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2516
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 2517 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 2571
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 2572 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2612
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 114/258 (44%), Gaps = 52/258 (20%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2242 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2299
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 2300 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 2344
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 2345 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 2383
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 2384 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 2430
Query: 375 PTIVNFGENVKALQVSCG 392
P +V + +QV+CG
Sbjct: 2431 PKMVKVLLGHRVIQVACG 2448
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3241 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3298
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 3299 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 3341
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 3342 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 3381
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 3382 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 3428
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 3429 LQGHRVVDIACG 3440
>gi|47214261|emb|CAG01938.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1055
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 164/390 (42%), Gaps = 76/390 (19%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G+LG+ S + P C+ F LK CGG H++FL G VY G N G
Sbjct: 4 WGKAKDGQLGIEVERNSMFEPRNCNVFSGRGLKEAVCGGQHSVFLLHDGSVYTCGSNGCG 63
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG ++ P + L + + +S G HS A+ G+++ WG GQLGLG
Sbjct: 64 QLGHNKP---GTSPELVGALDTQRITLVSCGQAHSMAVNEQGQVFAWGAGDGGQLGLGTT 120
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A V IP ++ L Q G + +A++ G++ +WG SG+LG G+
Sbjct: 121 EAAV-RIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEP---- 175
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S+ P+ +K L G+ + AG G+H+
Sbjct: 176 ----SKLFPQPLKSLAGIPLAKITAG----------------------------GDHSFA 203
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
SL G ++ WG N+ G LG+ I P ++ S+ V +SCG +HTAA+++ +
Sbjct: 204 LSL--SGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVV-HISCGDEHTAALTKVR 260
Query: 341 I------------------LTWGWGGSHGT-------FSED------GHSSGGQLGHGND 369
I G SH T +D G S GQLGHG+
Sbjct: 261 IRSASQCFRTSGGRCSNPFFCQRIGCSHSTRVTILLWLFQDGGLFTFGDGSWGQLGHGST 320
Query: 370 VDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ + P V + Q++CG +HT A
Sbjct: 321 SNELLPRRVLELMGTEVSQITCGRHHTLAF 350
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 171/374 (45%), Gaps = 69/374 (18%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P + A + + ++CG AH++ + E G V+A G D GQLG+ G + +RI L
Sbjct: 74 PELVGALDTQRITLVSCGQAHSMAVNEQGQVFAWGAGDGGQLGL----GTTEAAVRIPRL 129
Query: 122 KKE-----VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK-KAAKVIPIPTKVECLS 175
K + Q+ G H A++ DG+L+ WG+N++GQLGLGK + +K+ P P K L+
Sbjct: 130 IKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLK--SLA 187
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG--QESSI---LGFLRST------ 224
GI + G + S A++ G V WG +G+LG Q+ ++ + FLRS
Sbjct: 188 GIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHIS 247
Query: 225 --SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE--GNHARR 280
E+T L K V+++ A+ F S G R + Q +H+ R
Sbjct: 248 CGDEHTAALTK----VRIRSASQCFRTS------------GGRCSNPFFCQRIGCSHSTR 291
Query: 281 PS----LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 336
+ L G L+T+G G LG GS P RV + V Q++CG HT A
Sbjct: 292 VTILLWLFQDGGLFTFGDGSWGQLGHGSTSNELLPRRVL-ELMGTEVSQITCGRHHTLAF 350
Query: 337 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG--NDVDYIHPTIVNF---------GENVK 385
+ + + +GG +S GQLG G + ++P +N +
Sbjct: 351 APSSGVVYAFGG----------NSHGQLGTGELSAEKCLYPVKINLLSGNNHRTDSKKYS 400
Query: 386 ALQVSCGFNHTGAL 399
+++CG +H+ L
Sbjct: 401 VTKITCGGDHSFLL 414
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 96/264 (36%), Gaps = 70/264 (26%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG G+LG E + S + PR G +K A G HS + +G
Sbjct: 1 MLCWGKAKDGQLGIEVERN--------SMFEPRNCNVFSGRGLKEAVCGGQHSVFLLHDG 52
Query: 258 RVYIFGDR------------------AVD--KMLFQEGNHARRPSLISGGELYTWGSNEN 297
VY G A+D ++ A ++ G+++ WG+ +
Sbjct: 53 SVYTCGSNGCGQLGHNKPGTSPELVGALDTQRITLVSCGQAHSMAVNEQGQVFAWGAGDG 112
Query: 298 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGW---------- 346
G LG+G+ + R+ + + QV CG +H A+S +G++ TWG
Sbjct: 113 GQLGLGTTEAAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGK 172
Query: 347 ------------------------GGSH-------GTFSEDGHSSGGQLGHGNDVDYIHP 375
GG H G G + GQLG + D P
Sbjct: 173 GEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVP 232
Query: 376 TIVNFGENVKALQVSCGFNHTGAL 399
+ F + K + +SCG HT AL
Sbjct: 233 CHIKFLRSQKVVHISCGDEHTAAL 256
>gi|330822422|ref|XP_003291651.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
gi|325078150|gb|EGC31817.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
Length = 453
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 169/350 (48%), Gaps = 61/350 (17%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P + + + +K +A G HTL LTE V++ G+ QLG+ L P+ I L
Sbjct: 142 PSLVTPLKDFKIKQVAGGRRHTLVLTEDFRVFSFGVGSEYQLGVGSTENQPL-PVEIESL 200
Query: 122 KK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC---LSG 176
K ++++ G+ HS +T DG+++ WG + Q G G + + I IP ++
Sbjct: 201 SKLGNIIKLECGWGHSLVLTSDGDIFTWGFTQDSQTGHGF-SEEPIHIPKMIKTNYKFKN 259
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
IFT G + ++A+T G+V SWG+G G+LGHG ++ P+LI+ ++
Sbjct: 260 IFT-----GSDFNLAITNDGRVCSWGSGEFGQLGHGDTKNV---------EAPKLIQSIQ 305
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNE 296
+ +H+ I+ N R+Y + KM+ +HA + + G+L T G N
Sbjct: 306 PL---------VHTNLINTN-RIYEY------KMVACGFSHAL--IIDNDGKLLTLGWNG 347
Query: 297 NGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFS 354
NG LG G H P +++ F V +VS G H+A I+E GK+ WG G
Sbjct: 348 NGQLGSGVKGDNHLVPTKLEFDFDGEKVVKVSAGRNHSACITESGKLYIWGNGNK----- 402
Query: 355 EDGHSSGGQLGHGNDV-DYIHP-TIVNFGEN------VKALQVSCGFNHT 396
G+LG+G V D + P +++ EN K L +SCGF+HT
Sbjct: 403 -------GKLGNGKSVGDQLTPLELIDIDENNTDPSNQKVLNISCGFDHT 445
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 142/306 (46%), Gaps = 50/306 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACGGAHTLFLTETGCVYATGLNDFG 101
+G G +LG+GS E++ PV + K ++ L CG H+L LT G ++ G
Sbjct: 175 FGVGSEYQLGVGSTENQPLPVEIESLSKLGNIIKLECGWGHSLVLTSDGDIFTWGFTQDS 234
Query: 102 QLGISENIGYSLEPLRISGLKK---EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
Q G G+S EP+ I + K + I TG + AIT DG + WG GQLG G
Sbjct: 235 QTG----HGFSEEPIHIPKMIKTNYKFKNIFTGSDFNLAITNDGRVCSWGSGEFGQLGHG 290
Query: 159 K----KAAKVIP-----IPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
+A K+I + T + + I+ K A GF ++ + GK+L+ G G+G+
Sbjct: 291 DTKNVEAPKLIQSIQPLVHTNLINTNRIYEYKMVACGFSHALIIDNDGKLLTLGWNGNGQ 350
Query: 209 LGHGQESSILGFLRSTSEYTP-RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LG G ++ + P +L + +G KV +AG HSACI E+G++YI+G+
Sbjct: 351 LGSG--------VKGDNHLVPTKLEFDFDGEKVVKVSAGRNHSACITESGKLYIWGN--- 399
Query: 268 DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
GN + + S G+ T ++++ E P S V +S
Sbjct: 400 -------GNKGKLGNGKSVGDQLT------------PLELIDIDENNTDP-SNQKVLNIS 439
Query: 328 CGWKHT 333
CG+ HT
Sbjct: 440 CGFDHT 445
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 132/316 (41%), Gaps = 59/316 (18%)
Query: 124 EVVQISTGYHHSSAITVD-GELYMWGKNSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQ 181
E I G++H+ ++ + +LY G S + + K+ IP+ V L KQ
Sbjct: 96 ECKDIVCGHYHTMLVSKEKDQLYSCGWTSFVAMDRVNKETNFKSIIPSLVTPLKDFKIKQ 155
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KV 240
A G ++ +T +V S+G G +LG G + ++ P I+ L + +
Sbjct: 156 VAGGRRHTLVLTEDFRVFSFGVGSEYQLGVGS---------TENQPLPVEIESLSKLGNI 206
Query: 241 KIAAAGFLHSACIDENGRVYIFG---DRAVDKMLFQEGNHARRP---------------- 281
G+ HS + +G ++ +G D +E H +
Sbjct: 207 IKLECGWGHSLVLTSDGDIFTWGFTQDSQTGHGFSEEPIHIPKMIKTNYKFKNIFTGSDF 266
Query: 282 --SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG--PFSESPV---------DQVSC 328
++ + G + +WGS E G LG G + +P+ +Q P + + V+C
Sbjct: 267 NLAITNDGRVCSWGSGEFGQLGHGDTKNVEAPKLIQSIQPLVHTNLINTNRIYEYKMVAC 326
Query: 329 GWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD-YIHPTIVNFG-ENVK 385
G+ H I ++GK+LT GW G+ GQLG G D ++ PT + F + K
Sbjct: 327 GFSHALIIDNDGKLLTLGWNGN------------GQLGSGVKGDNHLVPTKLEFDFDGEK 374
Query: 386 ALQVSCGFNHTGALLE 401
++VS G NH+ + E
Sbjct: 375 VVKVSAGRNHSACITE 390
>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
Length = 4836
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 138/301 (45%), Gaps = 46/301 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4124
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4125 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+P+ K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4184 SDGSKVPM--KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4239
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4240 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4270
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4271 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4321
Query: 340 K 340
K
Sbjct: 4322 K 4322
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 3280
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3281 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3324
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 170/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3959 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4016
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4017 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4074
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4075 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4129
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4130 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ ++ P +L G +YTWG + LG GS D + P
Sbjct: 4184 SDGSKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4244 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4290
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4291 IQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VY+ G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGTRDAQTLA 3168
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3283
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3284 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P +S KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPTALPGLDS---------KHIVGIACGPAQSFAW 777
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLG G E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 139/321 (43%), Gaps = 65/321 (20%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N L P + GL
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS-- 285
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 286 --------------------GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 325
G++Y+WG +N LG+G+ + + P+ ++G + +D
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKVID- 714
Query: 326 VSCGWKHTAAISE-GKILTWG 345
V+ G H A++E ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 89/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LGLG
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 114/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + PR I L VK A +HS
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 3056
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3057 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3095
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3096 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3142
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3143 PKMVKVLLGHRVIQVACGTRDAQTL 3167
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 8/152 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 LGI--SENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG+ E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGLGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
+ K P PT + L A G QS A
Sbjct: 747 RVTK--PEPTALPGLDSKHIVGIACGPAQSFA 776
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4011
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4012 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4054
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4055 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 4094
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4095 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4141
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 4142 LQGHRVIDIACG 4153
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 41/178 (23%)
Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQ--------------EGNHA 278
+A+ G + AC + NGRVY + + L Q +G+H
Sbjct: 449 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHY 508
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHTAA 335
+L + GE+Y+WG + G LG G L P+ + G + V ++CG ++AA
Sbjct: 509 L--ALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 336 IS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
I+ EG++ TWG G G+LGHG+ D P +V + +K + V+CG
Sbjct: 567 ITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 612
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 87/213 (40%), Gaps = 51/213 (23%)
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A+ G+V SWG G GRLGHG + P++I G K A +H
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSG---KQAGKHVVH 556
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
AC G Y ++ + GELYTWG G LG GS +
Sbjct: 557 IAC----GSTY-------------------SAAITAEGELYTWGRGNYGRLGHGSSEDEA 593
Query: 310 SPERVQGPFSESPVDQVSCGW--KHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGH 366
P V G +D V+CG T A++E G++ W WG DG G+LG
Sbjct: 594 IPMLVAGLKGLKVID-VACGSGDAQTLAVTENGQV--WSWG--------DGDY--GKLGR 640
Query: 367 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G P ++ +++ ++V CG + AL
Sbjct: 641 GGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIAL 673
>gi|444919546|ref|ZP_21239558.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444708349|gb|ELW49424.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 494
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 163/348 (46%), Gaps = 62/348 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ +R PV + A+A G AH+L + G V+A G N GQ
Sbjct: 172 WGSNASGQLGEGTTSNRPEPVQVQGLSG--VVAVAAGSAHSLAVRSDGTVWAWGANASGQ 229
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+++ GL VV ++ G+HHS A+ DG ++ WG+N + QLG K +
Sbjct: 230 LGDGTTTDR-LVPVQVQGLSG-VVAVAAGHHHSLAVRNDGTVWGWGRNDSNQLG---KGS 284
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P +V+ LS + A G S+AV G V + G+ +G+LG G
Sbjct: 285 MRLLVPAQVQGLSAVVA--VAAGDTHSLAVGSDGTVWAVGSNNNGQLGDG---------- 332
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
T+ Y + L GV V +AA + HS + +G V+ +G + ++ +G R
Sbjct: 333 -TTTYRLVPVPVLSGV-VSVAANDY-HSLAVRSDGTVWAWGYNSTGQL--GDGTTTTRLV 387
Query: 281 PSLISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
P +SG G + WGSN G LG GS L P RVQ
Sbjct: 388 PVQVSGLSEVVSVVAGGYHSLAVRSDGSAWDWGSNAYGQLGDGSTTYLPVPVRVQ---QL 444
Query: 321 SPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
S V V+ G H+ A+ S+G + TW G++S GQLG+G
Sbjct: 445 SGVGAVASGSSHSLALRSDGTVWTW------------GYNSFGQLGNG 480
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 159/356 (44%), Gaps = 52/356 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ PV + A+ G +H+L + G V+A G N GQ
Sbjct: 20 WGANSSGQLGDGTTTYSPVPVPVQVQGLSEVVAVDAGSSHSLAVRSDGTVWAWGSNASGQ 79
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I S P+++ GL V+ ++ G H A+ DG ++ WG NS+GQ G G
Sbjct: 80 LGDETTISRS-TPVQVLGLSG-VLFVAAGSSHVLALRYDGTVWAWGSNSSGQRGDGTTNN 137
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P+ + + LSG+ A G S+AV G +WG+ SG+LG G S
Sbjct: 138 RALPV--QAQGLSGVMA--VAAGDNHSLAVRSDGSAWAWGSNASGQLGEGTTS------- 186
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA---------VDKMLFQ 273
+ P ++ L GV AAG HS + +G V+ +G A D+++
Sbjct: 187 --NRPEPVQVQGLSGVVA--VAAGSAHSLAVRSDGTVWAWGANASGQLGDGTTTDRLVPV 242
Query: 274 E-----------GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
+ H ++ + G ++ WG N++ LG GS+ +L P +VQG S
Sbjct: 243 QVQGLSGVVAVAAGHHHSLAVRNDGTVWGWGRNDSNQLGKGSMRLL-VPAQVQG---LSA 298
Query: 323 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
V V+ G H+ A+ GS GT G ++ GQLG G + P V
Sbjct: 299 VVAVAAGDTHSLAV-----------GSDGTVWAVGSNNNGQLGDGTTTYRLVPVPV 343
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 159/375 (42%), Gaps = 54/375 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+ G G+ +R PV + A+A G H+L + G +A G N GQ
Sbjct: 122 WGSNSSGQRGDGTTNNRALPVQAQGLSG--VMAVAAGDNHSLAVRSDGSAWAWGSNASGQ 179
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG EP+++ GL VV ++ G HS A+ DG ++ WG N++GQLG G
Sbjct: 180 LG-EGTTSNRPEPVQVQGLSG-VVAVAAGSAHSLAVRSDGTVWAWGANASGQLGDGTTTD 237
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+++P+ +V+ LSG+ A G S+AV G V WG S +LG G
Sbjct: 238 RLVPV--QVQGLSGVVA--VAAGHHHSLAVRNDGTVWGWGRNDSNQLGKG---------- 283
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR----------------- 265
S P ++ L V AAG HS + +G V+ G
Sbjct: 284 SMRLLVPAQVQGLS--AVVAVAAGDTHSLAVGSDGTVWAVGSNNNGQLGDGTTTYRLVPV 341
Query: 266 -AVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 324
+ ++ N ++ S G ++ WG N G LG G+ P +V G SE V
Sbjct: 342 PVLSGVVSVAANDYHSLAVRSDGTVWAWGYNSTGQLGDGTTTTRLVPVQVSG-LSEV-VS 399
Query: 325 QVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 384
V+ G+ A S+G W G ++ GQLG G+ P V V
Sbjct: 400 VVAGGYHSLAVRSDGSAWDW------------GSNAYGQLGDGSTTYLPVPVRVQQLSGV 447
Query: 385 KALQVSCGFNHTGAL 399
A V+ G +H+ AL
Sbjct: 448 GA--VASGSSHSLAL 460
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 136/296 (45%), Gaps = 47/296 (15%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEVVQISTGYHH 134
+A G +H+L L G V+A G N GQLG + P+++ GL EVV + G H
Sbjct: 1 MAAGSSHSLALRSDGTVWAWGANSSGQLGDGTTTYSPVPVPVQVQGLS-EVVAVDAGSSH 59
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ DG ++ WG N++GQLG ++ P+ +V LSG+ A G +A+
Sbjct: 60 SLAVRSDGTVWAWGSNASGQLGDETTISRSTPV--QVLGLSGVLF--VAAGSSHVLALRY 115
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G V +WG+ SG+ G G + + P + L GV AAG HS +
Sbjct: 116 DGTVWAWGSNSSGQRGDGT---------TNNRALPVQAQGLSGVMA--VAAGDNHSLAVR 164
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLI----------------------SGGELYTW 292
+G + +G A ++ EG + RP + S G ++ W
Sbjct: 165 SDGSAWAWGSNASGQL--GEGTTSNRPEPVQVQGLSGVVAVAAGSAHSLAVRSDGTVWAW 222
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 347
G+N +G LG G+ P +VQG S V V+ G H+ A+ ++G + WGWG
Sbjct: 223 GANASGQLGDGTTTDRLVPVQVQG---LSGVVAVAAGHHHSLAVRNDGTV--WGWG 273
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 132/293 (45%), Gaps = 51/293 (17%)
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
++ G HS A+ DG ++ WG NS+GQLG G +P+P +V+ LS + A G
Sbjct: 1 MAAGSSHSLALRSDGTVWAWGANSSGQLGDGTTTYSPVPVPVQVQGLSEVVAVDA--GSS 58
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
S+AV G V +WG+ SG+L G E++I S TP + L G V AAG
Sbjct: 59 HSLAVRSDGTVWAWGSNASGQL--GDETTI-------SRSTPVQVLGLSG--VLFVAAGS 107
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP--------------------SLISGG 287
H + +G V+ +G + + N+ P ++ S G
Sbjct: 108 SHVLALRYDGTVWAWGSNSSGQRGDGTTNNRALPVQAQGLSGVMAVAAGDNHSLAVRSDG 167
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGW 346
+ WGSN +G LG G+ P +VQG S V V+ G H+ A+ S+G + W W
Sbjct: 168 SAWAWGSNASGQLGEGTTSNRPEPVQVQG---LSGVVAVAAGSAHSLAVRSDGTV--WAW 222
Query: 347 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G ++ GQLG G D + P V V A V+ G +H+ A+
Sbjct: 223 GA----------NASGQLGDGTTTDRLVPVQVQGLSGVVA--VAAGHHHSLAV 263
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 92/180 (51%), Gaps = 10/180 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ + G+LG G+ R PV + ++A H+L + G V+A G N GQL
Sbjct: 322 GSNNNGQLGDGTTTYRLVPVPV----LSGVVSVAANDYHSLAVRSDGTVWAWGYNSTGQL 377
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
G L P+++SGL EVV + G +HS A+ DG + WG N+ GQLG G
Sbjct: 378 GDGTTT-TRLVPVQVSGLS-EVVSVVAGGYHSLAVRSDGSAWDWGSNAYGQLGDGST--T 433
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+P+P +V+ LSG+ A G S+A+ G V +WG G+LG+G + +RS
Sbjct: 434 YLPVPVRVQQLSGV--GAVASGSSHSLALRSDGTVWTWGYNSFGQLGNGPPLNTATVIRS 491
>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
Length = 4814
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4043 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4102
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4103 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4160
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4161 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4217
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4218 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4248
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4249 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4299
Query: 340 KILTWG 345
K + G
Sbjct: 4300 KPASAG 4305
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3049 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3108
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3109 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3166
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3167 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3223
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH C+
Sbjct: 3224 -------RKPQVVEGLRGKKIVHVAVGALH--CL-------------------------- 3248
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
++ G++Y WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3249 --AVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3301
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3937 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3994
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3995 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4052
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4053 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4107
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4108 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4161
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4162 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4221
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4222 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4268
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4269 IQRPRLVAALQGKKVNRVACGSAHTLA 4295
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2977 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3036
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3037 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3094
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3095 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3145
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3146 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3205
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3206 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG---- 3260
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3261 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3301
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 482 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 540
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 541 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 598
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 599 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 649
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 650 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 709
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 710 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 754
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 497 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 555
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 556 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 614
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 615 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 672
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 673 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 712
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 148/353 (41%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 420 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 468
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +++I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 469 ASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 524
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 525 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 572
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV A G GD A+ ++ G++
Sbjct: 573 MLVAGLKGLKVIDVACG---------------SGD-------------AQTLAVTENGQV 604
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG G
Sbjct: 605 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 663
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 664 NQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 704
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 553 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 612
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 613 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 671
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 672 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 714
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2931 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2988
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 2989 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 3033
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3034 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3072
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3073 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3119
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3120 PKMVKVLLGHRVIQVACGSRDAQTL 3144
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3932 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3989
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 3990 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4032
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4033 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 4072
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4073 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4119
Query: 381 GENVKALQVSCG 392
+ + + V+CG
Sbjct: 4120 LQGHRVVDVACG 4131
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 607 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 666
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 667 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 718
>gi|157821577|ref|NP_001101850.1| RCC1 and BTB domain-containing protein 1 [Rattus norvegicus]
gi|149064107|gb|EDM14377.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Rattus norvegicus]
Length = 531
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 134/301 (44%), Gaps = 49/301 (16%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKRIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGEL+ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
TP + L GV V G+ H+ +L
Sbjct: 223 -TPVRVAALHGVCVNQIVCGYAHTL------------------------------ALTDE 251
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTW 344
G LY WG+N G LG GS + L SP ++ E ++ +C HT+A G + W
Sbjct: 252 GLLYAWGANTYGQLGTGSKNNLLSPTQIMVE-KERVIEIAACHSTHTSAAKTQGGHVYMW 310
Query: 345 G 345
G
Sbjct: 311 G 311
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 118/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G ++A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K+VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L G+ Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+++ E E V ++IAA H SA + G VY++G
Sbjct: 276 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG L P +I K+ V++I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 120/293 (40%), Gaps = 59/293 (20%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITV--DGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
L P ++K V G S AI V E++++G N + LG G + + +P K
Sbjct: 13 LSPQETGSIRKACV---FGISASEAIYVTDSDEVFVFGLNYSNCLGTGDNQSTL--VPKK 67
Query: 171 VECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
+E L G K + G V + T G V +WG G +LG+G + + ++ T
Sbjct: 68 LEALCGKRIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TN 124
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+K++ V A G HS +L + GEL
Sbjct: 125 LLVKQVVEV-----ACGSHHSM------------------------------ALAADGEL 149
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGG 348
+ WG N G +G GS +P +V V ++CG + A+ G++ WG+ G
Sbjct: 150 FAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNG 209
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ GQLG GN+ + + P V V Q+ CG+ HT AL +
Sbjct: 210 N------------GQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTD 250
>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
familiaris]
Length = 4837
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4066 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4125
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4126 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4183
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4184 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4240
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4241 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4271
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4272 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4322
Query: 340 KILTWG 345
K + G
Sbjct: 4323 KPASAG 4328
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH C+
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALH--CL-------------------------- 3271
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
++ G++Y WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3272 --AVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3324
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3960 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4017
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4018 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4075
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4076 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4130
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4131 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4185 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4244
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4245 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4291
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4292 IQRPRLVAALQGKKVNRVACGSAHTLA 4318
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG---- 3283
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3284 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 148/353 (41%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV A G GD A+ ++ G++
Sbjct: 596 MLVAGLKGLKVIDVACG---------------SGD-------------AQTLAVTENGQV 627
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG G
Sbjct: 628 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 686
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 687 NQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 116/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G L S + PR I L VK A +HS
Sbjct: 3012 GKVYACGEATNGRLGLG--------LSSGTVPIPRQITALSSYVVKKVA---VHSG---- 3056
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3057 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3095
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3096 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3142
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTL 3167
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4012
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4013 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4055
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4056 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 4095
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4096 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4142
Query: 381 GENVKALQVSCG 392
+ + + V+CG
Sbjct: 4143 LQGHRVVDVACG 4154
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
>gi|348575702|ref|XP_003473627.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cavia
porcellus]
Length = 1080
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 165/384 (42%), Gaps = 80/384 (20%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-- 157
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
Query: 158 ------GKKAAKVIPIPTKV---EC------LSGIFTKQAALGFEQSVAVTG-----GGK 197
+ + +P+ + EC S + T + L + +A +G +
Sbjct: 121 SEECIRVPRKSIFMPVDKNIRIKECKKTASRKSWVSTLCSELAPDSHLAESGQVAVSASE 180
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V WG G+LG G + + +P+LIK L G+ AAG HS
Sbjct: 181 VFCWGQNKYGQLGLG--------IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFV----- 227
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
L G ++ WG N+ G LG+ + + P ++
Sbjct: 228 -------------------------LTLSGAIFGWGRNKFGQLGLNDENDRYVPYLLKSL 262
Query: 318 FSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 376
S+ V + CG HTAA++ EG + T+G GG GQLGH + I+P
Sbjct: 263 RSQKIV-YICCGEDHTAALTKEGGVFTFGAGGY------------GQLGHNSTSHEINPR 309
Query: 377 IVNFGENVKALQVSCGFNHTGALL 400
V Q++CG HT A +
Sbjct: 310 KVFELMGSIVTQIACGRQHTSAFV 333
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 150/361 (41%), Gaps = 81/361 (22%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GI----------SENIGYSLEP-LRISGLKKEVVQISTGYHHSSAITVD----------- 141
G+ ++I ++ +RI KK + S S + D
Sbjct: 117 GLLGSEECIRVPRKSIFMPVDKNIRIKECKKTASRKSWVSTLCSELAPDSHLAESGQVAV 176
Query: 142 --GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
E++ WG+N GQLGLG K P ++ L GI Q A G S +T G +
Sbjct: 177 SASEVFCWGQNKYGQLGLGIDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 235
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
WG G+LG E+ Y P L+K L K+ G H+A + + G V
Sbjct: 236 GWGRNKFGQLGLNDEN---------DRYVPYLLKSLRSQKIVYICCGEDHTAALTKEGGV 286
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
+ FG ++ +H P + EL +GSI
Sbjct: 287 FTFGAGGYGQLGHNSTSHEINPRKVF--EL------------MGSI-------------- 318
Query: 320 ESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 377
V Q++CG +HT+A S G+I ++G GG+ GQLG G+ + P
Sbjct: 319 ---VTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKSPFT 363
Query: 378 V 378
V
Sbjct: 364 V 364
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 96/180 (53%), Gaps = 12/180 (6%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 184 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 243
Query: 102 QLGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG+++ + Y L+ LR +++V I G H++A+T +G ++ +G GQLG
Sbjct: 244 QLGLNDENDRYVPYLLKSLR----SQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 299
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
+ ++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 300 NSTSHEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 357
>gi|240255530|ref|NP_190350.4| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|332644794|gb|AEE78315.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 954
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 159/369 (43%), Gaps = 72/369 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF-- 100
WG GRLG G P + F +++ CG HT +T +G +YA G D
Sbjct: 323 WGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNA 382
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG+ + +P+RI G + V IS G H++ +T +G+L+ +G + G LG G
Sbjct: 383 GLLGLGSGASH-WKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHG 441
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-------TGGGKVLSWGAGGSGRLGH 211
+ + IP +VE L+G T +AA G S AV T GK+ +WG G GRLGH
Sbjct: 442 DRIS--TNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGH 499
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G L P + EL+ + A G + + +G+VY G
Sbjct: 500 GDIECRL---------IPSCVTELDTTSFQQVACGQSITVALSMSGQVYAMG-------- 542
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 331
S D++ +P ++G +S V +V+CG+
Sbjct: 543 ----------------------------TADPSHDIVRAPSCIEGGLGKSFVQEVACGFH 574
Query: 332 HTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 390
H A + S+ ++ TWG G S GQLGHG+ PT+V + + +V
Sbjct: 575 HIAVLNSKAEVYTWGKG------------SNGQLGHGDTEYRCMPTLVKALKGKQVRKVV 622
Query: 391 CGFNHTGAL 399
CG N+T +
Sbjct: 623 CGSNYTATI 631
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 99/235 (42%), Gaps = 50/235 (21%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P ++ + + + G +V VT G++ SWG GRLGHG S +
Sbjct: 289 LPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPH------- 341
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
P+LI E G V++A G H+ + +G +Y +GD
Sbjct: 342 --PKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGD---------------------- 377
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 345
G + G LG+GS P R+ G V +SCG HTA + SEGK+ T+G
Sbjct: 378 ------GDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFG 431
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
GTF G LGHG+ + P V + ++ +CG H+ A++
Sbjct: 432 ----DGTF--------GALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVV 474
>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Cricetulus griseus]
Length = 4836
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 138/301 (45%), Gaps = 46/301 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4124
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4125 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4182
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4183 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4239
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4240 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4270
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4271 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4321
Query: 340 K 340
K
Sbjct: 4322 K 4322
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 3280
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3281 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3324
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3959 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4016
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4017 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4074
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4075 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4129
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4130 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4244 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4290
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4291 IQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VY+ G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3283
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3284 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPTALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 146/355 (41%), Gaps = 85/355 (23%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N L P + GL
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
L+ L+G+KV A +G + + ENG+V
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQV---------------------------- 627
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGW 346
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG
Sbjct: 628 --WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVIKVRCGSQFSIALTKDGQVYSWGK 684
Query: 347 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G + +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 685 GDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 114/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + PR I L VK A +HS
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 3056
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3057 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3095
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3096 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3142
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTL 3167
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746
Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVA 191
+ K P PT L G+ TK A G QS A
Sbjct: 747 RVTK--PEPT---ALPGLDTKHIVGIACGPAQSFA 776
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4011
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4012 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4054
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4055 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 4094
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4095 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4141
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 4142 LQGHRVIDIACG 4153
>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Ailuropoda melanoleuca]
Length = 4837
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4066 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4125
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4126 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4183
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4184 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4240
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4241 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4271
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4272 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4322
Query: 340 KILTWG 345
K + G
Sbjct: 4323 KPASAG 4328
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH C+
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALH--CL-------------------------- 3271
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
++ G++Y WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3272 --AVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3324
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3960 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4017
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4018 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4075
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4076 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4130
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4131 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4185 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4244
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4245 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4291
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4292 IQRPRLVAALQGKKVNRVACGSAHTLA 4318
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG---- 3283
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3284 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 148/353 (41%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +++I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV A G GD A+ ++ G++
Sbjct: 596 MLVAGLKGLKVIDVACG---------------SGD-------------AQTLAVTENGQV 627
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG G
Sbjct: 628 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 686
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 687 NQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 3056
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3057 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3095
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3096 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3142
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTL 3167
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4012
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4013 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4055
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4056 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 4095
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4096 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4142
Query: 381 GENVKALQVSCG 392
+ + + V+CG
Sbjct: 4143 LQGHRVVDVACG 4154
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
>gi|196012955|ref|XP_002116339.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
gi|190580930|gb|EDV21009.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
Length = 514
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 125/284 (44%), Gaps = 76/284 (26%)
Query: 44 GNGDYGRLGLGSLES--------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
G G G LGLG+ + + PV+ + H GG H + LT G VY+
Sbjct: 182 GKGHMGCLGLGNCDDVNVPRQIPQLLPVMVTTVAIHP------GGRHAMALTAEGKVYSW 235
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G D GQLG +GY L+P I LK KEV +I+ G HS A+ DG+++ WG SNG
Sbjct: 236 GCGDRGQLGHGNTLGY-LDPTLIDELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSNGA 294
Query: 155 LGLGKKAAKVIP------------------------------------------------ 166
LG G A+++P
Sbjct: 295 LGHGNNLAQLLPKKIMSLNGKHIMAVACGECYTIAVAGDDVWSWGLGGNGELGYGVEMPS 354
Query: 167 --IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
+PTK+E L A G+ S AV+ GKV +WG+G RLG G E I+
Sbjct: 355 YYMPTKIEALFFKGITNVACGYATSFAVSANGKVWAWGSGDRFRLGLGNEKVIV------ 408
Query: 225 SEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
PR I+ +L+G K+K A H+ IDENG+VYI+G + +
Sbjct: 409 ---KPREIQGDLKGKKIKRVVASLFHALAIDENGQVYIWGSQEI 449
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 129/295 (43%), Gaps = 36/295 (12%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGI--SENIGYSLEPLRISGLKKEVVQISTGYH 133
+ACG ++ G ++A G G LG+ +++ + ++ + V I G
Sbjct: 162 IACGYDSLFVVSRNGGIFACGKGHMGCLGLGNCDDVNVPRQIPQLLPVMVTTVAIHPGGR 221
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H+ A+T +G++Y WG GQLG G + PT ++ L + A G S+AV
Sbjct: 222 HAMALTAEGKVYSWGCGDRGQLGHGNTLGYL--DPTLIDELKSKEVTKIACGAMHSIAVL 279
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
GK+ SWG G +G LGHG + ++ P+ I L G + A G ++ +
Sbjct: 280 SDGKIFSWGDGSNGALGHGN---------NLAQLLPKKIMSLNGKHIMAVACGECYTIAV 330
Query: 254 --DE--------NGRV-------YIFGDRAVDKMLFQ-----EGNHARRPSLISGGELYT 291
D+ NG + + ++ + F+ +A ++ + G+++
Sbjct: 331 AGDDVWSWGLGGNGELGYGVEMPSYYMPTKIEALFFKGITNVACGYATSFAVSANGKVWA 390
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 345
WGS + LG+G+ V+ P +QG + +V H AI E G++ WG
Sbjct: 391 WGSGDRFRLGLGNEKVIVKPREIQGDLKGKKIKRVVASLFHALAIDENGQVYIWG 445
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 124/261 (47%), Gaps = 38/261 (14%)
Query: 113 LEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
LEP + L+ + I+ GY ++ +G ++ GK G LGLG + +P ++
Sbjct: 146 LEPDKSKLLENLDPSDIACGYDSLFVVSRNGGIFACGKGHMGCLGLGN--CDDVNVPRQI 203
Query: 172 ECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
L + A+ G ++A+T GKV SWG G G+LGHG + LG+L P
Sbjct: 204 PQLLPVMVTTVAIHPGGRHAMALTAEGKVYSWGCGDRGQLGHG---NTLGYL------DP 254
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA--------------VDKMLFQEG 275
LI EL+ +V A G +HS + +G+++ +GD + K++ G
Sbjct: 255 TLIDELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSNGALGHGNNLAQLLPKKIMSLNG 314
Query: 276 NHARRPSL-------ISGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVS 327
H + ++G ++++WG NG LG G + + P +++ F + + V+
Sbjct: 315 KHIMAVACGECYTIAVAGDDVWSWGLGGNGELGYGVEMPSYYMPTKIEALFFKG-ITNVA 373
Query: 328 CGWKHTAAIS-EGKILTWGWG 347
CG+ + A+S GK+ WG G
Sbjct: 374 CGYATSFAVSANGKVWAWGSG 394
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 88/175 (50%), Gaps = 5/175 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G G LG G+ ++ P + + A+ACG +T+ + V++ GL G+
Sbjct: 287 WGDGSNGALGHGNNLAQLLPKKIMSLNGKHIMAVACGECYTIAVAGDD-VWSWGLGGNGE 345
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + P +I L K + ++ GY S A++ +G+++ WG +LGLG +
Sbjct: 346 LGYGVEMPSYYMPTKIEALFFKGITNVACGYATSFAVSANGKVWAWGSGDRFRLGLGNE- 404
Query: 162 AKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
KVI P +++ L G K+ ++A+ G+V WG+ G +G+ +++
Sbjct: 405 -KVIVKPREIQGDLKGKKIKRVVASLFHALAIDENGQVYIWGSQEIGPVGNDEDA 458
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 104/259 (40%), Gaps = 56/259 (21%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
E+Y+WG N L +K P+ P K + L + A G++ V+ G + +
Sbjct: 126 EVYVWGSKRNLLLAADEKN----PLEPDKSKLLENLDPSDIACGYDSLFVVSRNGGIFAC 181
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G G LG G + PR I +L V V A +H
Sbjct: 182 GKGHMGCLGLGNCDDV---------NVPRQIPQLLPVMVTTVA---IHPG---------- 219
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
G HA +L + G++Y+WG + G LG G+ P +
Sbjct: 220 -------------GRHAM--ALTAEGKVYSWGCGDRGQLGHGNTLGYLDPTLID-ELKSK 263
Query: 322 PVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
V +++CG H+ A +S+GKI +WG G S G LGHGN++ + P +
Sbjct: 264 EVTKIACGAMHSIAVLSDGKIFSWGDG------------SNGALGHGNNLAQLLPKKIMS 311
Query: 381 GENVKALQVSCGFNHTGAL 399
+ V+CG +T A+
Sbjct: 312 LNGKHIMAVACGECYTIAV 330
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 63/117 (53%), Gaps = 16/117 (13%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQG--PFSESPVDQVSCGWKHTAAIS-EGKILT 343
G ++ G GCLG+G+ D ++ P ++ P + V + G +H A++ EGK+ +
Sbjct: 176 GGIFACGKGHMGCLGLGNCDDVNVPRQIPQLLPVMVTTV-AIHPGGRHAMALTAEGKVYS 234
Query: 344 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
WG G GQLGHGN + Y+ PT+++ ++ + +++CG H+ A+L
Sbjct: 235 WGCGDR------------GQLGHGNTLGYLDPTLIDELKSKEVTKIACGAMHSIAVL 279
>gi|302799471|ref|XP_002981494.1| hypothetical protein SELMODRAFT_114812 [Selaginella moellendorffii]
gi|300150660|gb|EFJ17309.1| hypothetical protein SELMODRAFT_114812 [Selaginella moellendorffii]
Length = 420
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 173/383 (45%), Gaps = 78/383 (20%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENI---GYSLEPLRISGLKKEVVQI 128
S+ +ACG H+L LT++G ++A G N+ GQLG E ++ P R+ G++ V+
Sbjct: 53 SIARVACGHYHSLALTQSGELWAWGRNNEGQLGRGEKSILSAATITPQRVRGMESTRVRA 112
Query: 129 STGYHH-SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
+ G S AI DG L+ WG + GQLGLG + + +P K+ L+G Q +LG+
Sbjct: 113 AAGSGVVSMAICEDGSLWSWGSSKRGQLGLGLGVTRSL-LPQKIHALAGKSVLQVSLGWG 171
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGH----GQESSI-----------------LGFLRSTS- 225
++A T G++ SWG SGRLG+ Q S I + LR
Sbjct: 172 HALACTMDGELFSWGYHDSGRLGYLLPQDQPSMIQPSKNTLDRNDVGEKMLMEQLRKEDA 231
Query: 226 ---EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
++ P+L++ E K+ A G HS + E+G ++ FGD + D++ + + S
Sbjct: 232 PILQWEPKLVELPEPCKIIQVACGLDHSLALSESGLLFSFGDNSTDQLGREITEDSPIIS 291
Query: 283 LISGGEL-------------------------YTWGSNENGCLGIGSIDVLHSPERVQGP 317
+ GG+L YTWG + LG P V
Sbjct: 292 RV-GGDLEGKQVVAIGAGWGHSLAVERCSRAAYTWGWSSGSQLG------RSGPSSVPKK 344
Query: 318 FSE--SPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
E PV V+ G H+ A+ S+ ++ TWG G G+LG G+ D
Sbjct: 345 LEELDDPVVSVAGGRVHSLALTSKHQVWTWGCG------------RNGRLGLGSSRDENL 392
Query: 375 PTIVN-FGENVKALQVSCGFNHT 396
P +V+ E+ + + V CG++H+
Sbjct: 393 PVLVDSLEEHAEVIDVCCGYDHS 415
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 147/351 (41%), Gaps = 71/351 (20%)
Query: 43 WGNGDYGRLGLGSLE----SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
WG + G+LG G + P E ++A A G ++ + E G +++ G +
Sbjct: 76 WGRNNEGQLGRGEKSILSAATITPQRVRGMESTRVRAAAGSGVVSMAICEDGSLWSWGSS 135
Query: 99 DFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG- 156
GQLG+ + SL P +I L K V+Q+S G+ H+ A T+DGEL+ WG + +G+LG
Sbjct: 136 KRGQLGLGLGVTRSLLPQKIHALAGKSVLQVSLGWGHALACTMDGELFSWGYHDSGRLGY 195
Query: 157 ------------------------------LGKKAAKVIPI-PTKVECLSGIFTKQAALG 185
L K+ A ++ P VE Q A G
Sbjct: 196 LLPQDQPSMIQPSKNTLDRNDVGEKMLMEQLRKEDAPILQWEPKLVELPEPCKIIQVACG 255
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP---RLIKELEGVKVKI 242
+ S+A++ G + S+G + +LG R +E +P R+ +LEG +V
Sbjct: 256 LDHSLALSESGLLFSFGDNSTDQLG-----------REITEDSPIISRVGGDLEGKQVVA 304
Query: 243 AAAGFLHSACIDENGRV-YIFG-------------------DRAVDKMLFQEGNHARRPS 282
AG+ HS ++ R Y +G + D ++ G +
Sbjct: 305 IGAGWGHSLAVERCSRAAYTWGWSSGSQLGRSGPSSVPKKLEELDDPVVSVAGGRVHSLA 364
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 333
L S +++TWG NG LG+GS + P V + V V CG+ H+
Sbjct: 365 LTSKHQVWTWGCGRNGRLGLGSSRDENLPVLVDSLEEHAEVIDVCCGYDHS 415
>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
[Ornithorhynchus anatinus]
Length = 1006
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 128/282 (45%), Gaps = 37/282 (13%)
Query: 67 AFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EV 125
A + ++ A++CG AHTL L + G VYA GL+ GQLG+ P I L ++
Sbjct: 29 ALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDIQI 88
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
VQ+S GY+HS A++ E++ WG+N GQLGLG + K P ++ L GI Q A G
Sbjct: 89 VQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTS-PQLIKSLLGIPFMQIAAG 147
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
S +T G + WG G+LG E+ Y P L+K L K+
Sbjct: 148 GAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---------DRYVPNLLKSLRSQKIVYICC 198
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI--------------------- 284
G H+A + + G V+ FG ++ +H P +
Sbjct: 199 GEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAF 258
Query: 285 --SGGELYTWGSNENGCLGIGSIDVLHSPERVQG---PFSES 321
S G +Y++G NG LG GS SP V+G P+SE
Sbjct: 259 VPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYSEQ 300
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 110 WGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFG 169
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 170 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 229
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 230 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 283
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 87/218 (39%), Gaps = 55/218 (25%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLG-HGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G ++A+ G+V +WG G+LG G E I PR IK L +++
Sbjct: 41 GDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECI---------RVPRNIKSLSDIQIVQV 91
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G+ HS +L G E+++WG N+ G LG+G
Sbjct: 92 SCGYYHSL------------------------------ALSKGSEVFSWGQNKYGQLGLG 121
Query: 304 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 361
SP+ ++ P Q++ G H+ ++ G I WG +
Sbjct: 122 FEFKKQTSPQLIKSLLG-IPFMQIAAGGAHSFVLTLSGAIFGWG------------RNKF 168
Query: 362 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
GQLG ++ D P ++ + K + + CG +HT AL
Sbjct: 169 GQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 206
>gi|332261829|ref|XP_003279969.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Nomascus leucogenys]
Length = 704
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 161/343 (46%), Gaps = 48/343 (13%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTRNNKLY--MFGSNNWGQLGLGSKSAVSKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
+K ACG H L TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHILVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWGKNS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAAVTEDGRLFMWGKNSEGQIGL--KNVPNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+L G S +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKL--GLPSQLLGNHR-----TPQLVSEIPEKVIQVARGG-EH 254
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
+ + EN +YT+G + G LG+G+
Sbjct: 255 TVVLTENA-------------------------------VYTFGLGQFGQLGLGTFLFET 283
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 351
S +V + + +SCG HTA I + G + T+G HG
Sbjct: 284 SEPKVIENIRDQTISYISCGENHTALIRDIGLMYTFG-NSRHG 325
>gi|282722854|gb|ADA84473.1| retinitis pigmentosa GTPase regulator protein 2 1-17 isoform [Danio
rerio]
Length = 708
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 167/389 (42%), Gaps = 55/389 (14%)
Query: 8 AMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSA 67
A +K++LK D+ L G + + + F ++G+ ++G+LGLG+ + +P A
Sbjct: 27 APSKFWLKNDVPLRISCGDEHTALVTENGKLF--MFGSNNWGQLGLGTKTTVNKPTCVKA 84
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVV 126
+K ACG HTL T G +YA G N+ GQLG+ + N S + + +
Sbjct: 85 LRSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIK 144
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
++ G + S+A+T DG LYM G NS GQ+GLGK++ + P V G + G+
Sbjct: 145 MLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSV----GKRVFWVSCGY 200
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S VT G + ++G SG+LG E + + P+ + ++ V++A G
Sbjct: 201 YHSAFVTVDGALYTFGEKDSGKLGLSTE-------KLANHKVPQQVTDIPDRVVQVACGG 253
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSID 306
H+ + EN E+Y++G + G LG G+
Sbjct: 254 G-HTVALTEN-------------------------------EVYSFGLGQFGQLGHGTFI 281
Query: 307 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGH 366
RV F + V +CG HTA I++ +L G HG LG
Sbjct: 282 FESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLG---------LGE 332
Query: 367 GNDVDYIHPTIVNFGENVKALQVSCGFNH 395
N + PT+ + V+CG H
Sbjct: 333 ENFTNQFKPTLCPRFLDYHVHSVTCGGCH 361
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 135/321 (42%), Gaps = 73/321 (22%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
+ E+G V+ G + F S+ + PLRIS G H++ +T +G+L+
Sbjct: 9 IPESGAVFTFGKSKFADNAPSKFWLKNDVPLRIS----------CGDEHTALVTENGKLF 58
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
M+G N+ GQLGLG K + PT V+ L K A G ++ T G + + G
Sbjct: 59 MFGSNNWGQLGLGTKT--TVNKPTCVKALRSERVKLTACGRTHTLVFTSRGNLYACGGNN 116
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFGD 264
G+LG G + F L++ +K+ AAG SA + ++GR+Y+ GD
Sbjct: 117 EGQLGLGDCNDRTSF---------HLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMRGD 167
Query: 265 RAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 324
+ ++ + ++A P +S G+ W
Sbjct: 168 NSEGQIGLGKESNALTPQEVSVGKRVFW-------------------------------- 195
Query: 325 QVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT---IVNF 380
VSCG+ H+A ++ +G + T+G S G+LG + H + +
Sbjct: 196 -VSCGYYHSAFVTVDGALYTFGEKDS------------GKLGLSTEKLANHKVPQQVTDI 242
Query: 381 GENVKALQVSCGFNHTGALLE 401
+ V +QV+CG HT AL E
Sbjct: 243 PDRV--VQVACGGGHTVALTE 261
>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
catus]
Length = 4837
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4066 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4125
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4126 LGHSDSED-QLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4183
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4184 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4240
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4241 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4271
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4272 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4322
Query: 340 KILTWG 345
K + G
Sbjct: 4323 KPASAG 4328
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH C+
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALH--CL-------------------------- 3271
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
++ G++Y WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3272 --AVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3324
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 168/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3960 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4017
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4018 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4075
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4076 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4130
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G V A +G + C+ ++ V+ +GD K+
Sbjct: 4131 ------SEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4185 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4244
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4245 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4291
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4292 IQRPRLVAALQGKKVNRVACGSAHTLA 4318
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG---- 3283
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3284 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPV--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 147/355 (41%), Gaps = 85/355 (23%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
L+ L+G+KV A +G + + ENG+V
Sbjct: 596 VLVAGLKGLKVIDVACGSGDAQTLAVTENGQV---------------------------- 627
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGW 346
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG
Sbjct: 628 --WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGK 684
Query: 347 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G + +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 685 GDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E PV+ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 3056
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3057 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3095
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3096 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3142
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTL 3167
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 107/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4012
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4013 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4055
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4056 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 4095
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4096 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4142
Query: 381 GENVKALQVSCG 392
+ + V+CG
Sbjct: 4143 LQGHHVVDVACG 4154
>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pan troglodytes]
Length = 4776
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 139/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4005 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4064
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4065 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4122
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4123 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4179
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY
Sbjct: 4180 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVY------------------- 4213
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
TWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4214 -----------TWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4261
Query: 340 KILTWG 345
K + G
Sbjct: 4262 KPASAG 4267
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3064 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3123
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3124 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3181
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3182 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3238
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 3239 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 3272
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3273 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3316
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2992 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3051
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3052 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3109
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3110 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3160
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3161 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3220
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3221 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3275
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3276 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3316
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 136/311 (43%), Gaps = 51/311 (16%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG G ++ P +E
Sbjct: 3973 LESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIE 4028
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
L GI A G S VT G + +WG G GRLGH S + P+L+
Sbjct: 4029 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD---------SEDQLKPKLV 4079
Query: 233 KELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP--------- 281
+ L+G +V A +G + C+ ++ V+ +GD K+ + + P
Sbjct: 4080 EALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGL 4139
Query: 282 -------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 328
+L G +YTWG + LG GS D + P +VQG V ++
Sbjct: 4140 GVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIAT 4198
Query: 329 GWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 387
G H +E G++ TW G + GQLG G P +V + K
Sbjct: 4199 GSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNAIQRPRLVAALQGKKVN 4246
Query: 388 QVSCGFNHTGA 398
+V+CG HT A
Sbjct: 4247 RVACGSAHTLA 4257
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 148/353 (41%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV A G GD A+ ++ G++
Sbjct: 595 MLVAGLKGLKVIDVACG---------------SGD-------------AQTLAVTENGQV 626
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG G
Sbjct: 627 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 685
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 686 NQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2946 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3003
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 3004 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 3048
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3049 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3087
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3088 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3134
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3135 PKMVKVLLGHRVIQVACGSRDAQTL 3159
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
musculus]
Length = 4902
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4131 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4190
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4191 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4248
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4249 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4305
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4306 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4336
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4337 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4387
Query: 340 KILTWG 345
K + G
Sbjct: 4388 KPASAG 4393
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3138 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3197
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3198 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3255
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3256 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3312
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 3313 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 3346
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3347 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3390
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 4025 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4082
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4083 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4140
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4141 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4195
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4196 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4249
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4250 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4309
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4310 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4356
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4357 IQRPRLVAALQGKKVNRVACGSAHTLA 4383
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VY+ G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3066 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3125
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3126 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3183
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3184 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3234
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3235 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3294
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3295 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3349
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3350 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3390
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 573 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 631
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 632 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 689
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 690 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 740
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 741 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 800
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P +S KH I+ G ++ W
Sbjct: 801 SWGSNDQ-CQHFDTLRVT-KPEPTALPGLDS---------KHIVGIACGPAQSFAW 845
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 588 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 646
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 647 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 705
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 706 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 763
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 764 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 803
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 146/355 (41%), Gaps = 85/355 (23%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N L P + GL
Sbjct: 511 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 559
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 560 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 615
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 616 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 663
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
L+ L+G+KV A +G + + ENG+V
Sbjct: 664 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQV---------------------------- 695
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGW 346
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG
Sbjct: 696 --WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVIKVRCGSQFSIALTKDGQVYSWGK 752
Query: 347 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G + +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 753 GDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 795
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 114/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 3020 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3077
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + PR I L VK A +HS
Sbjct: 3078 GKVYSCGEATNGRLGLGMSSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 3122
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3123 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3161
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3162 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3208
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3209 PKMVKVLLGHRVIQVACGSRDAQTL 3233
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 644 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 703
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LG G
Sbjct: 704 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 762
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 763 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 805
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 698 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 757
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 758 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 814
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
+ K P PT + L A G QS A
Sbjct: 815 RVTK--PEPTALPGLDSKHIVGIACGPAQSFA 844
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 4020 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4077
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4078 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4120
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4121 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 4160
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4161 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4207
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 4208 LQGHRVIDIACG 4219
>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
musculus]
Length = 4841
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 138/301 (45%), Gaps = 46/301 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4070 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4129
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4130 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4187
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4188 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4244
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4245 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4275
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4276 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4326
Query: 340 K 340
K
Sbjct: 4327 K 4327
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3077 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3136
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3137 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3194
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3195 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3251
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 3252 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 3285
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3286 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3329
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3964 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4021
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4022 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4079
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4080 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4134
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4135 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4188
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4189 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4248
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4249 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4295
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4296 IQRPRLVAALQGKKVNRVACGSAHTLA 4322
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VY+ G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3005 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3064
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3065 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3122
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3123 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3173
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3174 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3233
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3234 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3288
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3289 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3329
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 510 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 568
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 569 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 626
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 627 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 677
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 678 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 737
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P +S KH I+ G ++ W
Sbjct: 738 SWGSNDQ-CQHFDTLRVT-KPEPTALPGLDS---------KHIVGIACGPAQSFAW 782
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 525 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 583
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 584 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 642
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 643 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 700
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 701 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 740
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 146/355 (41%), Gaps = 85/355 (23%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N L P + GL
Sbjct: 448 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 496
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 497 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 552
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 553 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 600
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
L+ L+G+KV A +G + + ENG+V
Sbjct: 601 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQV---------------------------- 632
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGW 346
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG
Sbjct: 633 --WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVIKVRCGSQFSIALTKDGQVYSWGK 689
Query: 347 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G + +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 690 GDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 732
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 114/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2959 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3016
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + PR I L VK A +HS
Sbjct: 3017 GKVYSCGEATNGRLGLGMSSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 3061
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3062 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3100
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3101 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3147
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3148 PKMVKVLLGHRVIQVACGSRDAQTL 3172
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 581 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 640
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LG G
Sbjct: 641 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 699
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 700 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 742
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 635 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 694
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 695 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 751
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
+ K P PT + L A G QS A
Sbjct: 752 RVTK--PEPTALPGLDSKHIVGIACGPAQSFA 781
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3959 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4016
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4017 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4059
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4060 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 4099
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4100 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4146
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 4147 LQGHRVIDIACG 4158
>gi|66826123|ref|XP_646416.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60474380|gb|EAL72317.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 2044
Score = 114 bits (284), Expect = 1e-22, Method: Composition-based stats.
Identities = 97/343 (28%), Positives = 151/343 (44%), Gaps = 59/343 (17%)
Query: 86 LTETGCVYATGLNDFGQ-----LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
LTE G VY G LGI + I L P ++ L +VV +S G+ H +A+
Sbjct: 764 LTENGDVYLWGRGAVKTPAVPILGIPQ-IEDQLLPFKLESLS-DVVSVSIGFCHGAAVRA 821
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
+GEL WG NGQLG G ++ P ++ L+ + Q G + ++ +T GKV S
Sbjct: 822 NGELLTWGVGENGQLGHGDTNNQI--EPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYS 879
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WGA G+LG G T +P + LE V A+G H A + + V
Sbjct: 880 WGASEYGQLGLGD---------VTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVL 930
Query: 261 IFGDRA---------------------VDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+FG+ A +D++ H ++ G++YTWG+ +
Sbjct: 931 VFGNGAAMGAASVVSLPTLVPSLKYLHIDRLCC---GHYSTAAITECGDVYTWGTGQE-- 985
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG G SP+ ++ ++S + Q+SCG +HTA +++ G+I T G +F + G
Sbjct: 986 LGHGGNSTETSPKLIEALRNQS-IRQISCGGRHTAFLTDSGRIFTCG----KDSFGQLGQ 1040
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
SG D P + + VSCG N+ AL +
Sbjct: 1041 MSG---------DQNKPKRIESLTKTTFISVSCGENYNVALFD 1074
Score = 112 bits (281), Expect = 2e-22, Method: Composition-based stats.
Identities = 68/238 (28%), Positives = 122/238 (51%), Gaps = 19/238 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G ++ P + + + + CG HT+ LT+ G VY+ G +++GQ
Sbjct: 828 WGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASEYGQ 887
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + +S P+++S L+K V+QI++G H + +T E+ ++G G A
Sbjct: 888 LGLGDVTQHS-SPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGN------GAAMGA 940
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
A V+ +PT V L + + G + A+T G V +WG G LGHG S
Sbjct: 941 ASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTG--QELGHGGNS------ 992
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+E +P+LI+ L ++ + G H+A + ++GR++ G + ++ G+ +
Sbjct: 993 ---TETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSGDQNK 1047
Score = 59.7 bits (143), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G LG G + P + A S++ ++CGG HT FLT++G ++ G + FGQ
Sbjct: 980 WGTGQ--ELGHGGNSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQ 1037
Query: 103 LGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAI 138
LG + G +P RI L K + +S G +++ A+
Sbjct: 1038 LG--QMSGDQNKPKRIESLTKTTFISVSCGENYNVAL 1072
>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
norvegicus]
Length = 4779
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4008 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4067
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4068 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4125
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4126 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4182
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4183 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4213
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4214 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4264
Query: 340 KILTWG 345
K + G
Sbjct: 4265 KPASAG 4270
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3015 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3074
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3075 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3132
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3133 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3189
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 3190 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 3223
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3224 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3267
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3902 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3959
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3960 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4017
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4018 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4072
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4073 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4126
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4127 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4186
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4187 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4233
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4234 IQRPRLVAALQGKKVNRVACGSAHTLA 4260
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VY+ G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2943 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3002
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3003 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3060
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3061 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3111
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3112 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3171
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3172 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3226
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3227 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3267
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 450 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 508
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 509 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 566
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 567 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 617
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 618 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 677
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 678 SWGSNDQ-CQHFDTLRVT-KPEPTALPGLDT---------KHIVGIACGPAQSFAW 722
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 465 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 523
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 524 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 582
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 583 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 640
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 641 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 680
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 146/355 (41%), Gaps = 85/355 (23%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N L P + GL
Sbjct: 388 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 436
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 437 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 492
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 493 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 540
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
L+ L+G+KV A +G + + ENG+V
Sbjct: 541 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQV---------------------------- 572
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGW 346
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG
Sbjct: 573 --WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVIKVRCGSQFSIALTKDGQVYSWGK 629
Query: 347 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G + +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 630 GDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 672
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 114/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2897 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2954
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + PR I L VK A +HS
Sbjct: 2955 GKVYSCGEATNGRLGLGMSSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 2999
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3000 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3038
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3039 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3085
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3086 PKMVKVLLGHRVIQVACGSRDAQTL 3110
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 521 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 580
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LG G
Sbjct: 581 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 639
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 640 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 682
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 575 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 634
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 635 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 691
Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVA 191
+ K P PT L G+ TK A G QS A
Sbjct: 692 RVTK--PEPT---ALPGLDTKHIVGIACGPAQSFA 721
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3897 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3954
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 3955 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 3997
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 3998 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 4037
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4038 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4084
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 4085 LQGHRVIDIACG 4096
>gi|431898775|gb|ELK07147.1| X-linked retinitis pigmentosa GTPase regulator [Pteropus alecto]
Length = 1019
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 165/357 (46%), Gaps = 57/357 (15%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL LTE G VYA G N+ G
Sbjct: 103 MFGSNNWGQLGLGSRSTVSKPTCVKALKPEKVKFAACGRNHTLVLTEEGKVYAAGGNNEG 162
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + + P+ + ++ Q+S G + S+A+TVDG L+MWG NS GQ+GL K
Sbjct: 163 QLGLGDTEDRNTFHPICFFTSQHQLKQLSAGSNTSAALTVDGNLFMWGDNSEGQIGL--K 220
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P +V G + G+ S VT G++ ++G G+LG L
Sbjct: 221 NVPNVCVPHQVTV--GKPIAWISCGYYHSAFVTMEGELYTFGETECGKLG-------LPR 271
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ P+L+ + +++A G G + ++AV
Sbjct: 272 QLLMNHKVPQLVPGIPEKVIQVACGG----------GHTVVLTEKAV------------- 308
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-G 339
YT+G + G LG+G+ + ++ P + + +SCG HTA I++ G
Sbjct: 309 ---------YTFGLGQFGQLGLGTFIFETAEPKILEPIKDQKIIYISCGENHTALITDVG 359
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCGFNH 395
+ T+G G HG LG N + PT+ NF + L V+CG H
Sbjct: 360 LMYTFG-DGRHGKLG---------LGMENFTNQFIPTLCSNFLRFMVEL-VACGGCH 405
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 142/335 (42%), Gaps = 71/335 (21%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
LACG HT +T +Y G N++GQLG+ S +P + LK E V+ + G +H
Sbjct: 85 LACGDEHTAIITGNNKLYMFGSNNWGQLGLGSRSTVS-KPTCVKALKPEKVKFAACGRNH 143
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ +T +G++Y G N+ GQLGLG + P C FT KQ + G S
Sbjct: 144 TLVLTEEGKVYAAGGNNEGQLGLGDTEDRNTFHPI---CF---FTSQHQLKQLSAGSNTS 197
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T G + WG G++G ++ + T G + + G+ H
Sbjct: 198 AALTVDGNLFMWGDNSEGQIGLKNVPNVCVPHQVTV-----------GKPIAWISCGYYH 246
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
SA + GELYT+G E G LG+ +++
Sbjct: 247 SAFV------------------------------TMEGELYTFGETECGKLGLPRQLLMN 276
Query: 310 S--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
P+ V G E V QV+CG HT ++E + T+G G GQLG G
Sbjct: 277 HKVPQLVPG-IPEK-VIQVACGGGHTVVLTEKAVYTFGLG------------QFGQLGLG 322
Query: 368 NDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ + P I+ ++ K + +SCG NHT + +
Sbjct: 323 TFIFETAEPKILEPIKDQKIIYISCGENHTALITD 357
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 14/75 (18%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G+G +G+LGLG + +++ P +CS F + ++ +ACGG H + V+AT
Sbjct: 364 FGDGRHGKLGLGMENFTNQFIPTLCSNFLRFMVELVACGGCHMI-------VFAT----- 411
Query: 101 GQLGISENIGYSLEP 115
+LGI+E I P
Sbjct: 412 PRLGIAEEIDEMYSP 426
>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
Length = 4836
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 138/301 (45%), Gaps = 46/301 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4124
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4125 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4182
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4183 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4239
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4240 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4270
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4271 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4321
Query: 340 K 340
K
Sbjct: 4322 K 4322
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 138/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +A G +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 3280
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3281 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3324
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3959 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4016
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4017 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4074
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4075 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4129
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4130 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4244 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4290
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4291 IQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVH 732
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P +S KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLGVT-KPEPTAFPGLDS---------KHIVGIACGPAQSFAW 777
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 162/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VY+ G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P ++ L + A G S +T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIQALKTKRIRDIAYGSSHSAPLTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3283
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3284 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWG 735
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 145/355 (40%), Gaps = 85/355 (23%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N L P + GL
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
L+ L+G+KV A +G + + ENG+V
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQV---------------------------- 627
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGW 346
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG
Sbjct: 628 --WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVIKVRCGSQFSIALTKDGQVYSWGK 684
Query: 347 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G + +LGHG + +P ++ + K + V+ G H L E
Sbjct: 685 GDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTE 727
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G + +T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSN 737
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 112/265 (42%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + PR I L VK A +HS
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 3056
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P +Q
Sbjct: 3057 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQ 3095
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++ G H+A + S G++ TWG G G+LGHG++ +
Sbjct: 3096 A-LKTKRIRDIAYGSSHSAPLTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3142
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTL 3167
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4011
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4012 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4054
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4055 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 4094
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4095 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4141
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 4142 LQGHRVIDIACG 4153
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
L G E++ Y P + GL+ K+V+ ++ G H +T D E++ WG N Q L
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTL 746
Query: 156 GLGKKAAKVIP 166
G+ K P
Sbjct: 747 GVTKPEPTAFP 757
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS +P V + +A G H L +T++G VYA G ND GQ
Sbjct: 3230 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3289
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVD 141
G + + +P + GL+ +++ +++ G HS A TVD
Sbjct: 3290 QG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVD 3329
>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4836
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 138/301 (45%), Gaps = 46/301 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4124
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4125 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4182
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4183 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4239
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4240 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4270
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4271 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4321
Query: 340 K 340
K
Sbjct: 4322 K 4322
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 3280
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3281 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3324
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3959 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4016
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4017 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4074
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4075 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4129
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4130 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4244 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4290
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4291 IQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VY+ G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3283
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3284 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P +S KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPTALPGLDS---------KHIVGIACGPAQSFAW 777
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 146/355 (41%), Gaps = 85/355 (23%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N L P + GL
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
L+ L+G+KV A +G + + ENG+V
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQV---------------------------- 627
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGW 346
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG
Sbjct: 628 --WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVIKVRCGSQFSIALTKDGQVYSWGK 684
Query: 347 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G + +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 685 GDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 114/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + PR I L VK A +HS
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 3056
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3057 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3095
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3096 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3142
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTL 3167
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
+ K P PT + L A G QS A
Sbjct: 747 RVTK--PEPTALPGLDSKHIVGIACGPAQSFA 776
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4011
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4012 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4054
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4055 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 4094
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4095 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4141
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 4142 LQGHRVIDIACG 4153
>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
Length = 4746
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 3975 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4034
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4035 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4092
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4093 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4149
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4150 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4180
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4181 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4231
Query: 340 KILTWG 345
K + G
Sbjct: 4232 KPASAG 4237
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 138/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +A G +H+ LT +G +Y GL ++G+
Sbjct: 2982 WGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGR 3041
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3042 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3099
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3100 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3156
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 3157 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 3190
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3191 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3234
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3869 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3926
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3927 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3984
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 3985 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4039
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4040 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4093
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4094 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4153
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4154 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4200
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4201 IQRPRLVAALQGKKVNRVACGSAHTLA 4227
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 415 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 473
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 474 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 531
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 532 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 582
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 583 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVH 642
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P +S KH I+ G ++ W
Sbjct: 643 SWGSNDQ-CQHFDTLGVT-KPEPTAFPGLDS---------KHIVGIACGPAQSFAW 687
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 162/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VY+ G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2910 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 2969
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P ++ L + A G S +T
Sbjct: 2970 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIQALKTKRIRDIAYGSSHSAPLTS 3027
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3028 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3078
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3079 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3138
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3139 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3193
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3194 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3234
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 430 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 488
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 489 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 547
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 548 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 605
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 606 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWG 645
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 145/355 (40%), Gaps = 85/355 (23%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N L P + GL
Sbjct: 353 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 401
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 402 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 457
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 458 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 505
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
L+ L+G+KV A +G + + ENG+V
Sbjct: 506 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQV---------------------------- 537
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGW 346
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG
Sbjct: 538 --WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVIKVRCGSQFSIALTKDGQVYSWGK 594
Query: 347 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G + +LGHG + +P ++ + K + V+ G H L E
Sbjct: 595 GDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTE 637
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 486 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 545
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LG G
Sbjct: 546 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 604
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G + +T +V SWG+
Sbjct: 605 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSN 647
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 112/265 (42%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2864 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2921
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + PR I L VK A +HS
Sbjct: 2922 GKVYSCGEATNGRLGLGMSSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 2966
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P +Q
Sbjct: 2967 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQ 3005
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++ G H+A + S G++ TWG G G+LGHG++ +
Sbjct: 3006 A-LKTKRIRDIAYGSSHSAPLTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3052
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3053 PKMVKVLLGHRVIQVACGSRDAQTL 3077
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3864 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3921
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 3922 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 3964
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 3965 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 4004
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4005 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4051
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 4052 LQGHRVIDIACG 4063
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 540 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 599
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
L G E++ Y P + GL+ K+V+ ++ G H +T D E++ WG N Q L
Sbjct: 600 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTL 656
Query: 156 GLGKKAAKVIP 166
G+ K P
Sbjct: 657 GVTKPEPTAFP 667
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS +P V + +A G H L +T++G VYA G ND GQ
Sbjct: 3140 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3199
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVD 141
G + + +P + GL+ +++ +++ G HS A TVD
Sbjct: 3200 QG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVD 3239
>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
catus]
Length = 4844
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4073 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4132
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4133 LGHSDSED-QLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4190
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4191 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4247
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4248 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4278
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4279 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4329
Query: 340 KILTWG 345
K + G
Sbjct: 4330 KPASAG 4335
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3079 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3138
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3139 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3196
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3197 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3253
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH C+
Sbjct: 3254 -------RKPQVVEGLRGKKIVHVAVGALH--CL-------------------------- 3278
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
++ G++Y WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3279 --AVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3331
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 168/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3967 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4024
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4025 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4082
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4083 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4137
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G V A +G + C+ ++ V+ +GD K+
Sbjct: 4138 ------SEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4191
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4192 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4251
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4252 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4298
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4299 IQRPRLVAALQGKKVNRVACGSAHTLA 4325
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3007 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3066
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3067 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3124
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3125 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3175
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3176 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3235
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3236 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG---- 3290
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3291 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3331
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPV--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 147/355 (41%), Gaps = 85/355 (23%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
L+ L+G+KV A +G + + ENG+V
Sbjct: 596 VLVAGLKGLKVIDVACGSGDAQTLAVTENGQV---------------------------- 627
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGW 346
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG
Sbjct: 628 --WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGK 684
Query: 347 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G + +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 685 GDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E PV+ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2961 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3018
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 3019 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 3063
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3064 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3102
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3103 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3149
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3150 PKMVKVLLGHRVIQVACGSRDAQTL 3174
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 107/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3962 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4019
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4020 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4062
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4063 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 4102
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4103 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4149
Query: 381 GENVKALQVSCG 392
+ + V+CG
Sbjct: 4150 LQGHHVVDVACG 4161
>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
porcellus]
Length = 551
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 118/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ YG+LG G++ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 123 WGHNAYGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G ++ P R++G K VV I+ G S A+ GE+Y+WG N NGQLGLG
Sbjct: 183 QVGSGSTANQAI-PRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS 241
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 242 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 293
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y ++ E + + ++IAA H SA + G VY++G
Sbjct: 294 --KSNQSYPTPVVVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 115/219 (52%), Gaps = 16/219 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V++ G N +GQLG +
Sbjct: 76 GCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGPHIVLATTEGEVFSWGHNAYGQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
I + L P IS K+V +++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQA- 193
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
IP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 194 -IPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++ TP + L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 143/344 (41%), Gaps = 65/344 (18%)
Query: 64 VCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
+CS E ++ AC G L+ T ++ G N G LG+ + + +LEP R+
Sbjct: 36 LCSEEELQVIRQ-ACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGLGD-VQSTLEPRRLD 93
Query: 120 GL-KKEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
L K++ +S G H T +GE++ WG N+ GQLG G ++P LS
Sbjct: 94 SLSDKKIACLSYGSGPHIVLATTEGEVFSWGHNAYGQLGNGTINHGLVPSHISTN-LSNK 152
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-- 235
+ A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 153 QVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQAIPRRVTGCLQ 203
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSN 295
V V IA A +D GE+Y WG N
Sbjct: 204 NKVVVNIACGQMCSMAVVDT-------------------------------GEVYVWGYN 232
Query: 296 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 354
NG LG+GS +P RV V +V+CG+ HT ++ EG++ WG
Sbjct: 233 GNGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWG--------- 282
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 283 ---ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSA 323
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 111/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N +G LGLG + + P +++ LS K A L + V T
Sbjct: 62 TVNDEIFVLGTNCSGCLGLGDVQSTLEP--RRLDSLSD--KKIACLSYGSGPHIVLATTE 117
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V SWG G+LG+G + G + S + L +V A G HS
Sbjct: 118 GEVFSWGHNAYGQLGNGTINH--GLVPS------HISTNLSNKQVTEVACGSYHSLV--- 166
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 167 ---------------------------LTSDGEVFAWGYNNSGQVGSGSTANQAIPRRVT 199
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG + A+ + G++ WG+ G+ GQLG G+ +
Sbjct: 200 GCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGN------------GQLGLGSSGNQPT 247
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTD 274
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ +P T C +F
Sbjct: 341 --SVTLPHLTHFSCTDDVF 357
>gi|320162832|gb|EFW39731.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 591
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 127/248 (51%), Gaps = 15/248 (6%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A +WG G G LG+ + P A + + ACG A TLF+ E+G VYA G N+
Sbjct: 265 AYVWGRGIDGSLGVEG-DKHVSPTQIHALDGKRVVHAACGAAFTLFVIESGEVYACGNNE 323
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLGI N S EP ++ L + +V+I+ G H+ A++ G LY WG +S+GQLG+G+
Sbjct: 324 HGQLGIGSNEAMS-EPTLVTNLPERIVRIACGNSHAVALSETGRLYAWGAHSSGQLGVGE 382
Query: 160 KAAKVIPIPTKVECLSGIFTKQAA---LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ P +VE S + A G ++ ++ G + ++G+G G+LG
Sbjct: 383 PLEDRLS-PVRVE--SNVVRDDVADFACGGNHTIILSNSGLLYAFGSGAQGQLG------ 433
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
LG L + ++ TP + EG K + G SA + + G++Y +G A + + +G
Sbjct: 434 -LGPLATKNQATPAALPNPEGRKYTAISCGQDISAAVSDRGKIYTWGSGASNALGLPDGR 492
Query: 277 HARRPSLI 284
P+LI
Sbjct: 493 TKYAPTLI 500
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 166/389 (42%), Gaps = 61/389 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA-TGLNDFG 101
WG G G LG G + P V A H +K L G HT+ L +G VY+
Sbjct: 164 WGEGTRGMLGHGEEDPEASPRVVEALLGHDIKMLCLGSGHTMALAVSGEVYSWGLGLGGR 223
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
E ++ PLR++GL+ ++ I+ +HS A+ +GE Y+WG+ +G LG+ G
Sbjct: 224 LGQGRERDRFT--PLRLAGLRGFDITHIACNENHSVAVADNGEAYVWGRGIDGSLGVEGD 281
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K PT++ L G AA G ++ V G+V + G G+LG G ++
Sbjct: 282 KHVS----PTQIHALDGKRVVHAACGAAFTLFVIESGEVYACGNNEHGQLGIGSNEAM-- 335
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--------------DR 265
P L+ L V+I A G H+ + E GR+Y +G DR
Sbjct: 336 -------SEPTLVTNLPERIVRI-ACGNSHAVALSETGRLYAWGAHSSGQLGVGEPLEDR 387
Query: 266 ----AVDKMLFQE--------GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
V+ + ++ GNH L + G LY +GS G LG+G + +
Sbjct: 388 LSPVRVESNVVRDDVADFACGGNHT--IILSNSGLLYAFGSGAQGQLGLGPLATKNQATP 445
Query: 314 VQGPFSE-SPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
P E +SCG +AA+S+ GKI TWG G S+ DG +
Sbjct: 446 AALPNPEGRKYTAISCGQDISAAVSDRGKIYTWGSGASNALGLPDGRTK----------- 494
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGALL 400
PT++ + + V+CGF H A +
Sbjct: 495 -YAPTLIESMADKRCRTVACGFFHMAATI 522
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 127/281 (45%), Gaps = 55/281 (19%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
++Y WG+ + G LG G++ + P VE L G K LG ++A+ G+V SWG
Sbjct: 160 DVYTWGEGTRGMLGHGEEDPEASP--RVVEALLGHDIKMLCLGSGHTMALAVSGEVYSWG 217
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G GRLG G+E +TP + L G + A HS + +NG Y++
Sbjct: 218 LGLGGRLGQGRERD---------RFTPLRLAGLRGFDITHIACNENHSVAVADNGEAYVW 268
Query: 263 GDRAVDKMLFQEGNHARRPS----------------------LISGGELYTWGSNENGCL 300
G R +D L EG+ P+ +I GE+Y G+NE+G L
Sbjct: 269 G-RGIDGSLGVEGDKHVSPTQIHALDGKRVVHAACGAAFTLFVIESGEVYACGNNEHGQL 327
Query: 301 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHS 359
GIGS + + P V E V +++CG H A+SE G++ WG HS
Sbjct: 328 GIGSNEAMSEPTLVTN-LPERIV-RIACGNSHAVALSETGRLYAWG-----------AHS 374
Query: 360 SGGQLGHGNDV-DYIHPTIVNFGENVKALQV---SCGFNHT 396
S GQLG G + D + P V NV V +CG NHT
Sbjct: 375 S-GQLGVGEPLEDRLSP--VRVESNVVRDDVADFACGGNHT 412
>gi|81885004|sp|Q6NXM2.1|RCBT1_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 1
gi|44890811|gb|AAH67005.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Mus musculus]
Length = 531
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 134/300 (44%), Gaps = 47/300 (15%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+V++++ G HHS A+ DGEL+ WG N+ GQ+G G A + P P
Sbjct: 114 QGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
TP + L G+ V G+ H+ +L G
Sbjct: 223 TPVRVAALHGMCVNQIVCGYAHTL------------------------------ALTDEG 252
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 345
LY WG+N G LG GS + L SP ++ E ++ +C HT+A G + WG
Sbjct: 253 LLYAWGANTYGQLGTGSKNNLLSPTQIMVE-KERVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 117/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G ++A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L G+ Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+++ E E V ++IAA H SA + G VY++G
Sbjct: 276 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 140/313 (44%), Gaps = 53/313 (16%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P ++K V T + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEAGSIRKACV-FGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAVTG-GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V +T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V A G HS + +G ++ +G ++ G+ A +P+
Sbjct: 127 IKQVIEV-----ACGSHHSMALAADGELFAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV V+Q+
Sbjct: 180 TKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRV-AALHGMCVNQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG ++ GQLG G+ + + PT + E +
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGSKNNLLSPTQI-MVEKERV 286
Query: 387 LQV-SCGFNHTGA 398
+++ +C HT A
Sbjct: 287 IEIAACHSTHTSA 299
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG L P +I K+ V++I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFCCTDDVF 333
>gi|428177897|gb|EKX46775.1| hypothetical protein GUITHDRAFT_40435, partial [Guillardia theta
CCMP2712]
Length = 312
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 148/334 (44%), Gaps = 56/334 (16%)
Query: 66 SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLK-K 123
S H + +A GG HTLFLT+ G V A G ND QLG E EP ++S L+ K
Sbjct: 1 SLLAGHHVVQVAAGGDHTLFLTDAGRVLACGRNDCYQLGDGYEGREAGPEPQQVSTLRWK 60
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
VV+++ G H+ +DG +Y WG S+G+LGLG K +P P KV L A
Sbjct: 61 RVVEMACGDAHNLVRCLDGSVYSWGLGSSGRLGLGN--FKSVPQPCKVSGLGEERCVSVA 118
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G+ S AV GGK+ +WG G G+LG G+ S E V+V+
Sbjct: 119 AGYYHSFAVMEGGKLFAWGNGTCGQLGTGKFESC-----------------CEPVQVEEP 161
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
NG+ + RAV G + G L++WG N +G LG G
Sbjct: 162 G-----------NGQRW----RAV------RGGEYHSLGMTDVGSLWSWGLNNDGQLGHG 200
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWGWGGSHGTFSEDGHSSGG 362
+ P+ + + + SCG AIS G ++ +W G++ G
Sbjct: 201 DEERCGRPKGIS-ELVGTKISCFSCGPNFNVAISNGSQVFSW------------GNNRYG 247
Query: 363 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
QLGHG+ V+ I T+ + L VSCG H
Sbjct: 248 QLGHGDKVEQIEETLRSGSHGPLVLSVSCGGRHV 281
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 115/271 (42%), Gaps = 58/271 (21%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G GRLGLG+ +S +P S + ++A G H+ + E G ++A G GQ
Sbjct: 84 WGLGSSGRLGLGNFKSVPQPCKVSGLGEERCVSVAAGYYHSFAVMEGGKLFAWGNGTCGQ 143
Query: 103 LGISENIGYSLEPLRIS--GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + EP+++ G + + G +HS +T G L+ WG N++GQLG G +
Sbjct: 144 LGTGK-FESCCEPVQVEEPGNGQRWRAVRGGEYHSLGMTDVGSLWSWGLNNDGQLGHGDE 202
Query: 161 AAKVIP------IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
P + TK+ C S G +VA++ G +V SWG G+LGHG +
Sbjct: 203 ERCGRPKGISELVGTKISCFS--------CGPNFNVAISNGSQVFSWGNNRYGQLGHGDK 254
Query: 215 -SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
I LRS S G V + G H +D GR+
Sbjct: 255 VEQIEETLRSGS----------HGPLVLSVSCGGRHVLGLDRKGRI-------------- 290
Query: 274 EGNHARRPSLISGGELYTWGSNENGCLGIGS 304
+ WG NE+GCLGIG
Sbjct: 291 ----------------WAWGCNESGCLGIGD 305
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G E RP S + +CG + ++ V++ G N +GQ
Sbjct: 189 WGLNNDGQLGHGDEERCGRPKGISELVGTKISCFSCGPNFNVAISNGSQVFSWGNNRYGQ 248
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + E LR V+ +S G H + G ++ WG N +G LG+G
Sbjct: 249 LGHGDKVEQIEETLRSGSHGPLVLSVSCGGRHVLGLDRKGRIWAWGCNESGCLGIGDNIP 308
Query: 163 KVIP 166
++ P
Sbjct: 309 RLAP 312
>gi|403263569|ref|XP_003924096.1| PREDICTED: uncharacterized protein LOC101049856 [Saimiri
boliviensis boliviensis]
Length = 1170
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 48/315 (15%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL TE G VYATG ND G
Sbjct: 58 VFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNDEG 117
Query: 102 QLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG+ E + L + + ++ Q+S G + S+A+T DG L+MWG NS GQ+GL
Sbjct: 118 QLGLGDTEERTTFHL--ISFFTPQHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLP 175
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+P + +G + G+ S VT G++ +G +G+LG L
Sbjct: 176 DMPNACVP----HQVTTGKPVSWISCGYYHSAFVTTDGELYIFGEPENGKLG-------L 224
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ ++ P+L+ E+ +++A G HS + EN
Sbjct: 225 PYELLSNHRIPQLVPEIPEKVIQVACGG-EHSVVLTEN---------------------- 261
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
+LYT+G + G LG+G+ S RV + +SCG H A +++
Sbjct: 262 ---------DLYTFGLGKFGQLGLGTFLFETSEPRVVESIKGRKISYISCGENHAALLTD 312
Query: 339 GKILTWGWGGSHGTF 353
++ G HG
Sbjct: 313 TGLMYTFGDGRHGKL 327
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 139/300 (46%), Gaps = 47/300 (15%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V +S G HS+ +T + +LY++G N+ GQLGLG K+A + PT V+ L K AA
Sbjct: 37 AVHLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSA--VSKPTCVKALKPEKVKLAAC 94
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G ++ T GG V + G G+LG G F S +TP+ K+K +
Sbjct: 95 GRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTTF-HLISFFTPQH-------KIKQLS 146
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI-------------------- 284
AG SA + E+GR++++GD + ++ + +A P +
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGLPDMPNACVPHQVTTGKPVSWISCGYYHSAFVT 206
Query: 285 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISEGKIL 342
+ GELY +G ENG LG+ L S R+ E P V QV+CG +H+ ++E +
Sbjct: 207 TDGELYIFGEPENGKLGLPY--ELLSNHRIPQLVPEIPEKVIQVACGGEHSVVLTENDLY 264
Query: 343 TWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
T+G G GQLG G + + P +V + K +SCG NH L +
Sbjct: 265 TFGLG------------KFGQLGLGTFLFETSEPRVVESIKGRKISYISCGENHAALLTD 312
>gi|169808411|ref|NP_082040.2| RCC1 and BTB domain-containing protein 1 [Mus musculus]
gi|26329171|dbj|BAC28324.1| unnamed protein product [Mus musculus]
gi|148704196|gb|EDL36143.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1, isoform CRA_a [Mus musculus]
Length = 531
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 134/300 (44%), Gaps = 47/300 (15%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+V++++ G HHS A+ DGEL+ WG N+ GQ+G G A + P P
Sbjct: 114 QGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
TP + L G+ V G+ H+ +L G
Sbjct: 223 TPVRVAALHGMCVNQIVCGYAHTL------------------------------ALTDEG 252
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 345
LY WG+N G LG GS + L SP ++ E ++ +C HT+A G + WG
Sbjct: 253 LLYAWGANTYGQLGTGSKNNLLSPTQIMVE-KERVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 117/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G ++A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L G+ Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+++ E E V ++IAA H SA + G VY++G
Sbjct: 276 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 140/313 (44%), Gaps = 53/313 (16%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P ++K V T + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEAGSIRKACV-FGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAVTG-GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V +T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V A G HS + +G ++ +G ++ G+ A +P+
Sbjct: 127 IKQVIEV-----ACGSHHSMALAADGELFAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV V+Q+
Sbjct: 180 TKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRV-AALHGMCVNQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG ++ GQLG G+ + + PT + E +
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGSKNNLLSPTQI-MVEKERV 286
Query: 387 LQV-SCGFNHTGA 398
+++ +C HT A
Sbjct: 287 IEIAACHSTHTSA 299
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG L P +I K+ V++I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFCCTDDVF 333
>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
Length = 4725
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 138/301 (45%), Gaps = 46/301 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 3954 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4013
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4014 LGHSDSED-QLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4071
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4072 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4128
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4129 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4159
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4160 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4210
Query: 340 K 340
K
Sbjct: 4211 K 4211
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3848 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPIQLIGGEQTLFAVTADGKLYATGYGAG 3905
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3906 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3963
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 3964 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4018
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4019 ------SEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4072
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4073 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4132
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4133 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4179
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4180 IQRPRLVAALQGKKVNRVACGSAHTLA 4206
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTLPLE-EPKVISAFSGKQGGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPTALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTLPLEEPKVISAFSGKQGGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 144/352 (40%), Gaps = 79/352 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLS- 175
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + S
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTLPLEEPKVISAFSG 547
Query: 176 ---GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
G A G S A+T G++ +WG G GRLGHG S E P L+
Sbjct: 548 KQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIPMLV 598
Query: 233 KELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
L+G+KV A +G + + ENG+V+
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVW------------------------------ 628
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGS 349
+WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG G +
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDN 687
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHG + +P ++ + K + V+ G H AL E
Sbjct: 688 Q------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 128/272 (47%), Gaps = 45/272 (16%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G++ +WG G GRLGHG +T++ P+++K L G +V A G
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACG-------- 3160
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
A+ +L G +++WG + G LG G + + P+ +
Sbjct: 3161 --------------------SRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3200
Query: 315 QGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+ + V Q+ CG + + A+++ ++ W W
Sbjct: 3201 ER-LNGQGVCQIECGAQFSLALTKSGVV-WTW 3230
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 116/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G L S + PR I L VK A +HS
Sbjct: 3012 GKVYACGEATNGRLGLG--------LSSGTVPIPRQITALSSYVVKKVA---VHSG---- 3056
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3057 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3095
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3096 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3142
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTL 3167
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 87/162 (53%), Gaps = 6/162 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
++ IP +E L+G Q G + S+A+T G V +W
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746
Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVA 191
+ K P PT L G+ TK A G QS A
Sbjct: 747 RVTK--PEPT---ALPGLDTKHIVGIACGPAQSFA 776
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3843 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPIQLIGGEQTLFAVTADGKLYAT 3900
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 3901 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 3943
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 3944 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 3983
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 3984 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEV 4030
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 4031 LQGHRVVDIACG 4042
>gi|170578406|ref|XP_001894395.1| hypothetical protein [Brugia malayi]
gi|158599034|gb|EDP36761.1| conserved hypothetical protein [Brugia malayi]
Length = 988
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 159/341 (46%), Gaps = 62/341 (18%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLEPLRISGLKKEVVQIS 129
+K++A G HTLFL++ G V++ G N G+LG + E Y++ P+ IS ++QIS
Sbjct: 49 VKSIASGERHTLFLSDDGKVWSCGSNYNGELGRGGVREG-SYTIYPVHISS-TVSIIQIS 106
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGL-GKKAAKVIP--IPTKVECLSGIFTKQAALGF 186
G HS A++ DG L+ WG NS+GQL + G A P +P+ E T Q A G
Sbjct: 107 AGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDILASDTPKRVPSLPE------TVQVACGA 160
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+V++ GGG+V WG GR+ H +P ++ + + +AG
Sbjct: 161 SHTVSLNGGGRVFIWGQQSDGRIRH----------------SPAEVEIFISIPIVQISAG 204
Query: 247 FLHSACIDENGRVYIFGDRA--------------------VDKMLFQEGNHARRPSLISG 286
L + + +G ++ +G ++ ++ E + +L
Sbjct: 205 NLFTMALTASGTLFAWGKNEEGQLGDFTNKDVVNPCAVPNINSVVAVECGDSHSIALTHE 264
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
G +++ GS+ G LG G + + R S V +++CG HT ++ GK+ T+G
Sbjct: 265 GRVFSCGSDSFGQLGCGQPNRSQNCMRGITEMLGSHVTRIACGRCHTIVVANGKMHTFGL 324
Query: 347 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 387
+S GQLGHGN + I P +++ ENV ++
Sbjct: 325 ------------NSNGQLGHGNTRNQITPRVIDSVENVASV 353
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 18/156 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG + + P C+ +S+ A+ CG +H++ LT G V++ G + FGQ
Sbjct: 220 WGKNEEGQLGDFTNKDVVNP--CAVPNINSVVAVECGDSHSIALTHEGRVFSCGSDSFGQ 277
Query: 103 LGI-----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
LG S+N + + L V +I+ G H + + +G+++ +G NSNGQLG
Sbjct: 278 LGCGQPNRSQNCMRGITEM----LGSHVTRIACGRCH-TIVVANGKMHTFGLNSNGQLGH 332
Query: 158 GKKAAKVIP-IPTKVECLSGIFTKQAALGFEQSVAV 192
G ++ P + VE ++ +F G++QS +
Sbjct: 333 GNTRNQITPRVIDSVENVASVFA-----GWDQSFCL 363
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 120/289 (41%), Gaps = 64/289 (22%)
Query: 143 ELYMWGKNSNGQLGLGKKA----AKVIPIPTKV----ECLSGIFTKQAALGFEQSVAVTG 194
+LY++G +GQLG + A+++ +P V +G+ K A G ++ ++
Sbjct: 5 QLYVFGCAGDGQLGFRPDSVESDAQMMIVPRLVYGAPTRQNGVIVKSIASGERHTLFLSD 64
Query: 195 GGKVLSWGAGGSGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
GKV S G+ +G LG G +E S YT + V + +AG HS
Sbjct: 65 DGKVWSCGSNYNGELGRGGVREGS----------YTIYPVHISSTVSIIQISAGRSHSMA 114
Query: 253 IDENGRVYIFGDR-----AVDKMLFQEGNHARRPSLIS----------------GGELYT 291
+ ++GR++ +G A+ + R PSL GG ++
Sbjct: 115 VSDDGRLFAWGSNSHGQLAMSGDILASDTPKRVPSLPETVQVACGASHTVSLNGGGRVFI 174
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSH 350
WG +G + HSP V+ F P+ Q+S G T A++ G + W
Sbjct: 175 WGQQSDG-------RIRHSPAEVE-IFISIPIVQISAGNLFTMALTASGTLFAW------ 220
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G + GQLG + D ++P V +V A V CG +H+ AL
Sbjct: 221 ------GKNEEGQLGDFTNKDVVNPCAVPNINSVVA--VECGDSHSIAL 261
>gi|358419997|ref|XP_003584389.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Bos
taurus]
Length = 538
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 151/331 (45%), Gaps = 50/331 (15%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K+DI + G I++ + F ++G+ ++G+LGLGS + +P A +
Sbjct: 73 SKFWFKRDIPISLSCGDEHTAITTGNNKLF--MFGSNNWGQLGLGSKATVNKPTCIKALK 130
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI---SENIGYSLEPLRISGLKKEVV 126
+K +ACG HTL LT G VYATG N+ GQLG+ E + L S K +
Sbjct: 131 PEKVKFVACGRNHTLILTGGGQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHK--IK 188
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
Q+S G + S+A+T DGEL+MWG NS GQ+GL +P + G + G+
Sbjct: 189 QLSAGSNTSAALTEDGELFMWGDNSEGQIGLQNITNICVPHQVTI----GKPISWISCGY 244
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S VT G++ ++G SG+LG L + P+L+ + +++A G
Sbjct: 245 YHSAFVTTEGELYTFGEPESGKLG-------LPPKLLVNHKVPQLVPGISEKVIQVACGG 297
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSID 306
G + ++AV YT+G + G LG+G+
Sbjct: 298 ----------GHTVVLTEKAV----------------------YTFGLGQFGQLGLGTFT 325
Query: 307 VLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
S +V + + V CG HTA I+
Sbjct: 326 FETSEPKVIESVKDKKISHVCCGENHTALIT 356
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 159/354 (44%), Gaps = 57/354 (16%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI 128
E+ + + G + ++G V+ FG+ +EN+ P + + + +
Sbjct: 36 EEQAFHSAITMGEPDKMVPDSGAVFT-----FGKTKFAENM-----PSKFWFKRDIPISL 85
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G H++ T + +L+M+G N+ GQLGLG KA + PT ++ L K A G
Sbjct: 86 SCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKA--TVNKPTCIKALKPEKVKFVACGRNH 143
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
++ +TGGG+V + G G+LG G F S +T + K+K +AG
Sbjct: 144 TLILTGGGQVYATGGNNEGQLGLGDTDERSAF-HLISFFTSQH-------KIKQLSAGSN 195
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS--------------------GGE 288
SA + E+G ++++GD + ++ Q + P ++ GE
Sbjct: 196 TSAALTEDGELFMWGDNSEGQIGLQNITNICVPHQVTIGKPISWISCGYYHSAFVTTEGE 255
Query: 289 LYTWGSNENGCLGIGS-IDVLHS-PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
LYT+G E+G LG+ + V H P+ V G SE V QV+CG HT ++E + T+G
Sbjct: 256 LYTFGEPESGKLGLPPKLLVNHKVPQLVPG-ISEK-VIQVACGGGHTVVLTEKAVYTFGL 313
Query: 347 GGSHGTFSEDGHSSGGQLGHGN-DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G GQLG G + P ++ ++ K V CG NHT +
Sbjct: 314 G------------QFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALI 355
>gi|198421625|ref|XP_002120080.1| PREDICTED: similar to mCG130390, partial [Ciona intestinalis]
Length = 1609
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 152/327 (46%), Gaps = 52/327 (15%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + R SA + +K LA H + LTE G V++ G D+
Sbjct: 805 GEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGSDGHAIALTENGEVFSWGDGDY 864
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ++ G+ HS+ +T+DG+L+ +G G+LG G
Sbjct: 865 GKLG-HGNSDRQRRPRQIEALRGQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGRLGHGS 923
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSIL 218
K IP +V L Q A G +V V+ V + G G G+LG G S
Sbjct: 924 TTNK--KIPERVMALENYIIGQVACGLNHTVIVSQDNLTVWACGDGDYGKLGIGGTS--- 978
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
++ +P I+ L V +K + G +A + +G++++FG D+M GN
Sbjct: 979 ------AKTSPTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMFGQ---DRMC---GNCE 1026
Query: 279 RRPS----------------------------LISGGELYTWGSNENGCLGIGSIDVLHS 310
R S L S G +YTWGSN +G LG+G + +
Sbjct: 1027 TRTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLGLGHTNHVQE 1086
Query: 311 PERVQGPFSESPVDQVSCGWKHTAAIS 337
P V+ S + Q+S G H+AA S
Sbjct: 1087 PTLVES-LSGKNIRQISAGRTHSAAWS 1112
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 122/245 (49%), Gaps = 16/245 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + +ACG H+ +T G ++ G D+G+
Sbjct: 859 WGDGDYGKLGHGNSDRQRRPRQIEALRGQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGR 918
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMW--GKNSNGQLGLGK 159
LG + P R+ L+ ++ Q++ G +H+ ++ D L +W G G+LG+G
Sbjct: 919 LGHGSTTNKKI-PERVMALENYIIGQVACGLNHTVIVSQDN-LTVWACGDGDYGKLGIGG 976
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+AK PTK+E LS + K+ + G + + A+T GK+ + G R+ E+
Sbjct: 977 TSAKT--SPTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMF---GQDRMCGNCET---- 1027
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
R++ + P+++ L + + G H+ + G VY +G ++ NH +
Sbjct: 1028 --RTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLGLGHTNHVQ 1085
Query: 280 RPSLI 284
P+L+
Sbjct: 1086 EPTLV 1090
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 170/389 (43%), Gaps = 64/389 (16%)
Query: 42 LWGNGDYGRL---GLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
L+G G +G+L G G L P + +F H + + CG T + G V + G
Sbjct: 754 LFGAGRHGQLAEVGSGVL----VPQLTKSF--HEARKVVCGQNCTFIINNNGVVLSCGEG 807
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYH-HSSAITVDGELYMWGKNSNGQ 154
+G+LG N S IS L+ +V+ STG H+ A+T +GE++ WG G+
Sbjct: 808 SYGRLG-QGNSDDSNRLTHISALQGFIVKQLATSTGSDGHAIALTENGEVFSWGDGDYGK 866
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P ++E L G Q A GF+ S VT GK+ ++G G GRLGHG
Sbjct: 867 LGHGNSDRQ--RRPRQIEALRGQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGRLGHGS- 923
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI-DENGRVYIFGDRAVDKMLFQ 273
+T++ P + LE + A G H+ + +N V+ GD K+
Sbjct: 924 --------TTNKKIPERVMALENYIIGQVACGLNHTVIVSQDNLTVWACGDGDYGKLGIG 975
Query: 274 EGNHARRPSLI-----------SGGELYTWGSNENGCLGI-------GSIDVLHSPE--- 312
+ P+ I S G +T +G L + G+ + SP
Sbjct: 976 GTSAKTSPTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMFGQDRMCGNCETRTSPSFNP 1035
Query: 313 RVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+V S + +S G +HT A+ S+G + TWG ++ GQLG G+
Sbjct: 1036 QVVTALSSHHIIDISVGAEHTIALTSKGIVYTWG------------SNTDGQLGLGHTNH 1083
Query: 372 YIHPTIVN--FGENVKALQVSCGFNHTGA 398
PT+V G+N++ Q+S G H+ A
Sbjct: 1084 VQEPTLVESLSGKNIR--QISAGRTHSAA 1110
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 124/311 (39%), Gaps = 58/311 (18%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
VY G GQL +G + +++ E ++ G + + I +G + G+ S
Sbjct: 752 VYLFGAGRHGQLA---EVGSGVLVPQLTKSFHEARKVVCGQNCTFIINNNGVVLSCGEGS 808
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE---QSVAVTGGGKVLSWGAGGSGR 208
G+LG G T + L G KQ A ++A+T G+V SWG G G+
Sbjct: 809 YGRLGQGNSDDS--NRLTHISALQGFIVKQLATSTGSDGHAIALTENGEVFSWGDGDYGK 866
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S + PR I+ L G +V A GF HSA + +G+++ FG
Sbjct: 867 LGHGN---------SDRQRRPRQIEALRGQEVVQVACGFKHSAVVTIDGKLFTFG----- 912
Query: 269 KMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 328
G++ R LG GS PERV + QV+C
Sbjct: 913 -----YGDYGR--------------------LGHGSTTNKKIPERVMA-LENYIIGQVAC 946
Query: 329 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 388
G HT +S+ + W G DG G+LG G PT + V +
Sbjct: 947 GLNHTVIVSQDNLTVWACG--------DG--DYGKLGIGGTSAKTSPTKIEVLSRVGIKK 996
Query: 389 VSCGFNHTGAL 399
+SCG T AL
Sbjct: 997 ISCGAQFTAAL 1007
>gi|148704197|gb|EDL36144.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1, isoform CRA_b [Mus musculus]
Length = 563
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 134/300 (44%), Gaps = 47/300 (15%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 86 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTN 145
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+V++++ G HHS A+ DGEL+ WG N+ GQ+G G A + P P
Sbjct: 146 QGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PTP 203
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 204 RKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--------- 254
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
TP + L G+ V G+ H+ +L G
Sbjct: 255 TPVRVAALHGMCVNQIVCGYAHTL------------------------------ALTDEG 284
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 345
LY WG+N G LG GS + L SP ++ E ++ +C HT+A G + WG
Sbjct: 285 LLYAWGANTYGQLGTGSKNNLLSPTQIMVE-KERVIEIAACHSTHTSAAKTQGGHVYMWG 343
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 117/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G ++A G N+ G
Sbjct: 131 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCG 190
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 191 QVG-SGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 249
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L G+ Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 250 NGNQLTPV--RVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 307
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+++ E E V ++IAA H SA + G VY++G
Sbjct: 308 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 343
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 237 WGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 296
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG L P +I K+ V++I+ + H S+A T G +YMWG+ GQ
Sbjct: 297 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ------ 348
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 349 -SVILPHLTHFCCTDDVF 365
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 131/288 (45%), Gaps = 52/288 (18%)
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG-GG 196
+T + E++++G N + LG G + + +P K+E L G K + G V +T G
Sbjct: 69 VTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLEALCGKKIKSLSYGSGPHVLLTTEDG 126
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
V +WG G +LG+G + + ++ T LIK++ V A G HS + +
Sbjct: 127 VVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLLIKQVIEV-----ACGSHHSMALAAD 178
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPS-------------------------LISGGELYT 291
G ++ +G ++ G+ A +P+ ++ GE+Y
Sbjct: 179 GELFAWGYNNCGQV--GSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYG 236
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHG 351
WG N NG LG+G+ +P RV V+Q+ CG+ HT A+++ +L + WG
Sbjct: 237 WGYNGNGQLGLGNNGNQLTPVRV-AALHGMCVNQIVCGYAHTLALTDEGLL-YAWGA--- 291
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV-SCGFNHTGA 398
++ GQLG G+ + + PT + E + +++ +C HT A
Sbjct: 292 -------NTYGQLGTGSKNNLLSPTQI-MVEKERVIEIAACHSTHTSA 331
>gi|390338528|ref|XP_782246.3| PREDICTED: RCC1 and BTB domain-containing protein 1
[Strongylocentrotus purpuratus]
Length = 536
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 120/225 (53%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + +ACG H+L LT+ G V+A G N+ G
Sbjct: 103 WGHNGYCQLGNGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVLTDRGEVFAWGYNNCG 162
Query: 102 QLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + NI + + + G K+ VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 163 QVGSGATANISTPRKVVSVLGGKR-VVSIACGQTSSLAVVDSGEVYGWGYNGNGQLGLGN 221
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P KV L+G+ QAA G+ S+A++ G + +WGA G+LG G ++++ G
Sbjct: 222 NVNQ--PSPCKVSSLNGLIISQAACGYAHSMALSDEGNIYTWGANSYGQLGTGNKANLCG 279
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+ I E G + IAA + H SA + + G+VY++G
Sbjct: 280 AAK---------IGESIGRFIDIAATHYAHISAAMTQTGKVYMWG 315
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 138/309 (44%), Gaps = 49/309 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFG 101
+GN LGLG + S P K + ALA G G H + TE G +Y+ G N +
Sbjct: 50 FGNNHNACLGLGDVMSSLTPRKIEGLCKKGMFALAFGSGPHVVAATENGEIYSWGHNGYC 109
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + L P RI+G ++ QI+ G HHS +T GE++ WG N+ GQ+G G
Sbjct: 110 QLG-NGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVLTDRGEVFAWGYNNCGQVGSGA 168
Query: 160 KAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A I P K V L G A G S+AV G+V WG G+G+LG G
Sbjct: 169 TAN--ISTPRKVVSVLGGKRVVSIACGQTSSLAVVDSGEVYGWGYNGNGQLGLG------ 220
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ ++ +P + L G+ + AA G+ HS + + G +
Sbjct: 221 ---NNVNQPSPCKVSSLNGLIISQAACGYAHSMALSDEGNI------------------- 258
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH-TAAIS 337
YTWG+N G LG G+ L ++ G +D + + H +AA++
Sbjct: 259 -----------YTWGANSYGQLGTGNKANLCGAAKI-GESIGRFIDIAATHYAHISAAMT 306
Query: 338 E-GKILTWG 345
+ GK+ WG
Sbjct: 307 QTGKVYMWG 315
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 131/303 (43%), Gaps = 60/303 (19%)
Query: 76 LAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQIST 130
LAC G +++T+ V+A G N LG+ + + SL P +I GL KK + ++
Sbjct: 27 LACVFGSAGNEAIYVTKDDEVFAFGNNHNACLGLGD-VMSSLTPRKIEGLCKKGMFALAF 85
Query: 131 GY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G H A T +GE+Y WG N QLG G ++P L Q A G S
Sbjct: 86 GSGPHVVAATENGEIYSWGHNGYCQLGNGTTNQGLLPHRITGN-LGSCKISQIACGSHHS 144
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+ +T G+V +WG G++G G ++I TPR + + G
Sbjct: 145 LVLTDRGEVFAWGYNNCGQVGSGATANI---------STPRKVVSVLG------------ 183
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
G R V Q + A ++ GE+Y WG N NG LG+G+
Sbjct: 184 -------------GKRVVSIACGQTSSLA----VVDSGEVYGWGYNGNGQLGLGNNVNQP 226
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
SP +V + + Q +CG+ H+ A+S EG I TW G +S GQLG GN
Sbjct: 227 SPCKVSS-LNGLIISQAACGYAHSMALSDEGNIYTW------------GANSYGQLGTGN 273
Query: 369 DVD 371
+
Sbjct: 274 KAN 276
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 122/290 (42%), Gaps = 59/290 (20%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+ L +SG+K V S G + + +T D E++ +G N N LGLG + + P + C
Sbjct: 18 DDLVVSGVKLACVFGSAG-NEAIYVTKDDEVFAFGNNHNACLGLGDVMSSLTPRKIEGLC 76
Query: 174 LSGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
G+F AL F VA T G++ SWG G +LG+G + G L R
Sbjct: 77 KKGMF----ALAFGSGPHVVAATENGEIYSWGHNGYCQLGNGTTNQ--GLLPH------R 124
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
+ L K+ A G HS + DR GE++
Sbjct: 125 ITGNLGSCKISQIACGSHHS---------LVLTDR---------------------GEVF 154
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGS 349
WG N G +G G+ + +P +V V ++CG + A + G++ WG+ G+
Sbjct: 155 AWGYNNCGQVGSGATANISTPRKVVSVLGGKRVVSIACGQTSSLAVVDSGEVYGWGYNGN 214
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
GQLG GN+V+ P V+ + Q +CG+ H+ AL
Sbjct: 215 ------------GQLGLGNNVNQPSPCKVSSLNGLIISQAACGYAHSMAL 252
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P S+ + ACG AH++ L++ G +Y G N +GQ
Sbjct: 209 WGYNGNGQLGLGNNVNQPSPCKVSSLNGLIISQAACGYAHSMALSDEGNIYTWGANSYGQ 268
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHH-SSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + + +T Y H S+A+T G++YMWG+ GQ
Sbjct: 269 LGTGNKANLCGAAKIGESIGRFIDIAATHYAHISAAMTQTGKVYMWGQ-CRGQ------- 320
Query: 162 AKVIPIPTKVECLSGIF 178
+ P+ T+ CL +F
Sbjct: 321 SITSPMETRFTCLDDVF 337
>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
Length = 1054
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 153/341 (44%), Gaps = 52/341 (15%)
Query: 43 WGNGDYGRLGLGSLESR---------WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WGN +G+LG+G +E W+P L+ +ACG HTLFLT G VY
Sbjct: 6 WGNASHGQLGMGGIEDEQILIPSQIPWKP-------DAPLRQIACGHRHTLFLTANGKVY 58
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSN 152
A G ND QLG N+ + PL I L+ VV I+ G HS A+T G++ WG N
Sbjct: 59 ACGNNDQAQLG--HNLP-TKRPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWGDNDC 115
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG + +I +P + L Q A G S+A+T G++ SWG+ G+LG
Sbjct: 116 GQLGQSTDQS-IIELPKIIRSLVSKHVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVK 174
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-L 271
+ S Y RL L G+ + A G HS I ++ V+ FG ++ L
Sbjct: 175 PPQEL-----SHCNYPLRLTT-LLGIPLATIACGGNHSFLISKSSAVFGFGRNNCGQLGL 228
Query: 272 FQEGNHARRPSLIS-----------GGELYTWGSNENGC----------LGIGSIDVLHS 310
E N A L + G E + +NE G LG GS
Sbjct: 229 NDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQLGHGSNTNEML 288
Query: 311 PERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 349
P R+ S + QV+CG +HT A+ S G++ +G G S
Sbjct: 289 P-RMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSS 328
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 121/278 (43%), Gaps = 53/278 (19%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+L+ WG S+GQLG+G + I IP+++ +Q A G ++ +T GKV + G
Sbjct: 2 DLFCWGNASHGQLGMGGIEDEQILIPSQIPWKPDAPLRQIACGHRHTLFLTANGKVYACG 61
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+LGH + P LI EL+ V A G HS + E G+V +
Sbjct: 62 NNDQAQLGHNLPTK-----------RPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSW 110
Query: 263 GD-------RAVDKMLFQE------------------GNHARRPSLISGGELYTWGSNEN 297
GD ++ D+ + + NH+ +L S GELY+WGSN
Sbjct: 111 GDNDCGQLGQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSL--ALTSCGELYSWGSNIY 168
Query: 298 GCLGIGSIDVL---HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFS 354
G LG+ L + P R+ P+ ++CG H+ IS+ + +G+
Sbjct: 169 GQLGVKPPQELSHCNYPLRLTTLLG-IPLATIACGGNHSFLISKSSAV-FGF-------- 218
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
G ++ GQLG ++ + +PT + + V+CG
Sbjct: 219 --GRNNCGQLGLNDESNRAYPTQLKTLRTLGVRFVACG 254
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G + G+LGL +R P ++ +ACG ++FLT G V+ G +GQ
Sbjct: 218 FGRNNCGQLGLNDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQ 277
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
LG N L + + + + Q++ G H+ A+ G +Y +G S+GQ LG ++
Sbjct: 278 LGHGSNTNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQ--LGNRS 335
Query: 162 AKVIPIPTKV 171
+ +P +V
Sbjct: 336 TNSVTLPQEV 345
>gi|355715932|gb|AES05447.1| regulator of chromosome condensation and BTB domain containing
protein 2 [Mustela putorius furo]
Length = 344
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 117/226 (51%), Gaps = 16/226 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 52 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSG 111
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + L P R++G K VV I+ G S A+ GE+Y+WG N NGQLGLG
Sbjct: 112 QVG-SGSTANQLIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS 170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P ++ L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 171 SGNQ--PTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 222
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFGD 264
+S Y ++ E + + ++IAA H SA + G VY++G
Sbjct: 223 --KSNQSYPAPVVVEKDRI-IEIAACHSAHTSAAKTQGGHVYMWGQ 265
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 114/225 (50%), Gaps = 14/225 (6%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 5 GCLGLGDVQSTIEPRRLESLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 63
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V +++ G +HS +T DGE++ WG N++GQ+G G A ++I
Sbjct: 64 TTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQLI 123
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P CL A G S+AV G+V WG G+G+LG G S +
Sbjct: 124 PRRV-TGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SGN 173
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
+ TP I L+G++V+ A G+ H+ + + G+VY +G + ++
Sbjct: 174 QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL 218
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 131/304 (43%), Gaps = 56/304 (18%)
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQL 155
N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+ QL
Sbjct: 2 NCCGCLGLGD-VQSTIEPRRLESLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQL 60
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G ++P LS + A G S+ +T G+V +WG SG++G G
Sbjct: 61 GNGTTNHGLVPCHISTN-LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS-- 117
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ ++ PR + + C+ V I A +M
Sbjct: 118 -------TANQLIPRRV-----------------TGCLQNKVVVNI----ACGQMCSM-- 147
Query: 276 NHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
++++ GE+Y WG N NG LG+GS +P R+ V +V+CG+ HT
Sbjct: 148 ------AVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRI-AALQGIRVQRVACGYAHTLV 200
Query: 336 IS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
++ EG++ WG +S GQLG GN + +P V ++ +C
Sbjct: 201 LTDEGQVYAWG------------ANSYGQLGTGNKSNQSYPAPVVVEKDRIIEIAACHSA 248
Query: 395 HTGA 398
HT A
Sbjct: 249 HTSA 252
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 157 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 216
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 217 QLGTGNKSNQSY-PAPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 269
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ +P T C +F
Sbjct: 270 --SVTLPHLTHFSCTDDVF 286
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 39/209 (18%)
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
LG ++ST E PR ++ L G K+ + G H G V+ +G A ++ N
Sbjct: 9 LGDVQSTIE--PRRLESLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 66
Query: 277 HARRPS-----------------------LISGGELYTWGSNENGCLGIGSIDVLHSPER 313
H P L S GE++ WG N +G +G GS P R
Sbjct: 67 HGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQLIPRR 126
Query: 314 VQGPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V G V ++CG + A ++ G++ WG+ G+ GQLG G+ +
Sbjct: 127 VTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGN------------GQLGLGSSGNQ 174
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGALLE 401
P + + ++ +V+CG+ HT L +
Sbjct: 175 PTPCRIAALQGIRVQRVACGYAHTLVLTD 203
>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
florea]
Length = 1081
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 161/364 (44%), Gaps = 52/364 (14%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G LGLG +E P + ++ +ACG +T+ +T+ G +Y+ G ND+
Sbjct: 31 WGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGNNDY 90
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E L+ I GL V + + G +H+ AI G+L+ WG N+ GQLGL
Sbjct: 91 GQLG-HEKGRKRLQ--LIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNS 147
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + P V+ L Q A G + + A+T G++ SWG+ G+LG G +
Sbjct: 148 KNF-MESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDIK--- 203
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
E P+ I G+ + A G HS I ++G V+ +G ++ +
Sbjct: 204 -----YEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRN 258
Query: 280 RPS----------------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
P L G ++T G+ G LG GS P +V
Sbjct: 259 LPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILPRQVM-E 317
Query: 318 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
S V Q+SCG +HT A+ S G++ WG GG+ GQLG+ + P
Sbjct: 318 LMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGA------------GQLGNHSTRSVTTP 365
Query: 376 TIVN 379
+V+
Sbjct: 366 QVVH 369
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 113/259 (43%), Gaps = 55/259 (21%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+++ WG +G+LGLG + I IP +++ +Q A G +V +T G++ S G
Sbjct: 27 DMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCG 86
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G+LGH + L +LI L+ K AA G H+ I+E
Sbjct: 87 NNDYGQLGHEKGRKRL-----------QLIPGLDAFVFKKAACGAYHTLAINE------- 128
Query: 263 GDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
G+L++WGSN G LG+ S + + S R+ S
Sbjct: 129 -----------------------WGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSV 165
Query: 323 VDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY-IHPTIVNF 380
V Q++CG KH A++ G++ +W G +S GQLG G D+ Y I P ++
Sbjct: 166 VVQIACGMKHAFALTNNGELYSW------------GSNSEGQLGLGTDIKYEIKPKFISA 213
Query: 381 GENVKALQVSCGFNHTGAL 399
+ ++CG H+ A+
Sbjct: 214 FIGIPIAFIACGGYHSIAI 232
>gi|444915451|ref|ZP_21235583.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713382|gb|ELW54282.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 746
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 160/380 (42%), Gaps = 57/380 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN YG+LG G+ R P + A+A G H L L G V A G N +GQ
Sbjct: 119 WGNNTYGQLGDGTTPHRASPGAVPGLS--GVVAIAAGNNHALALLSDGTVRAWGYNAYGQ 176
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG P+ + GL VV I+ G +HS A+ DG + WG N+ G+LG G
Sbjct: 177 LGDGTTT-QRRTPVAVLGLTG-VVAIAAGENHSLAVLADGTVRAWGNNTYGRLGDGTTTQ 234
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L+G+ A G S+AV G V +WG SGRLG G
Sbjct: 235 RTSPV--LVSSLTGV--TAIAAGANHSLAVLADGTVRAWGYNASGRLGDGT--------- 281
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY------IFGDRAVDK------- 269
+T TP + L GV A G + D R + GD V
Sbjct: 282 TTQRATPVAVPGLTGVTEISAGGGHSLALLADGTARAWGSNVSGQLGDGTVSNRTSPVLV 341
Query: 270 -------MLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
L GNH+ +L++ G WG+N +G LG G+ P + G +
Sbjct: 342 SSLTGVTALSAGGNHSL--ALLADGTARAWGANVSGQLGDGTTTQRTLPVGLPG---LTG 396
Query: 323 VDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
V ++ G H+ A ++ G + W GH++ GQLG G+ P +V
Sbjct: 397 VAALAAGGYHSLAVLANGTVRAW------------GHNTYGQLGDGSTAQRTAPVVVPAL 444
Query: 382 ENVKALQVSCGFNHTGALLE 401
V +L + G++H+ ALL
Sbjct: 445 TGVVSL--TAGYDHSLALLS 462
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 182/426 (42%), Gaps = 91/426 (21%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A WG+ G+LG G++ +R PV+ S+ + AL+ GG H+L L G A G N
Sbjct: 316 ARAWGSNVSGQLGDGTVSNRTSPVLVSSLT--GVTALSAGGNHSLALLADGTARAWGANV 373
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG +L P+ + GL V ++ G +HS A+ +G + WG N+ GQLG G
Sbjct: 374 SGQLGDGTTTQRTL-PVGLPGLTG-VAALAAGGYHSLAVLANGTVRAWGHNTYGQLGDGS 431
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG------- 212
A + P+ V L+G+ + A G++ S+A+ G V +WG SG+LG G
Sbjct: 432 TAQRTAPV--VVPALTGVVSLTA--GYDHSLALLSDGTVRAWGNNASGQLGDGTTNQRGT 487
Query: 213 --QESSI---------------------------------LGFLRSTSEYTPRLIKELEG 237
Q S + LG +++ +TP + L
Sbjct: 488 PVQVSGLTNVVALSGGKLYHALALLSDGTVRAWGYNMNGQLGDGSTSNRWTPVAVSGLTN 547
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------- 286
V V IAA G +S + NG V +G + ++ P + G
Sbjct: 548 V-VAIAAGGD-YSLALQSNGTVQSWGYGVYGPLGRDYDTYSPTPKAVPGVTNVVAIAAGA 605
Query: 287 ---------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 336
G +Y WG N+ G LG G+ ++P +V G + V ++ GW H+ A+
Sbjct: 606 NHVLALRADGTVYAWGRNDFGQLGDGTTVQRNTPVQVPG---LTNVVAIATGWDHSLALR 662
Query: 337 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNH 395
++G + WG+ + QLG G+ +Y P V NV A V+ G N
Sbjct: 663 ADGTVYAWGYNYAR------------QLGDGSTANYRQTPAPVPGLTNVVA--VTAGGNQ 708
Query: 396 TGALLE 401
+ ALL
Sbjct: 709 SLALLS 714
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 145/346 (41%), Gaps = 55/346 (15%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
LA G AH+L T G V A G N GQLG S P + GL V +S G +S
Sbjct: 50 LASGKAHSLLATPDGTVRAWGDNASGQLGDGTTTQRS-SPTAVPGLAGAVA-VSAGGEYS 107
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ DG + WG N+ GQLG G + P V LSG+ A G ++A+
Sbjct: 108 LALLGDGTVRAWGNNTYGQLGDGTTPHRA--SPGAVPGLSGVVAIAA--GNNHALALLSD 163
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG G+LG G +T TP + L GV V I AAG HS +
Sbjct: 164 GTVRAWGYNAYGQLGDGT---------TTQRRTPVAVLGLTGV-VAI-AAGENHSLAVLA 212
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISG--------------------GELYTWGSN 295
+G V +G+ ++ P L+S G + WG N
Sbjct: 213 DGTVRAWGNNTYGRLGDGTTTQRTSPVLVSSLTGVTAIAAGANHSLAVLADGTVRAWGYN 272
Query: 296 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFS 354
+G LG G+ +P V G + V ++S G H+ A +++G W
Sbjct: 273 ASGRLGDGTTTQRATPVAVPG---LTGVTEISAGGGHSLALLADGTARAW---------- 319
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
G + GQLG G + P +V+ V AL S G NH+ ALL
Sbjct: 320 --GSNVSGQLGDGTVSNRTSPVLVSSLTGVTAL--SAGGNHSLALL 361
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 84/170 (49%), Gaps = 7/170 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LG + P + ++ A+A G H L L G VYA G NDFGQ
Sbjct: 570 WGYGVYGPLGRD--YDTYSPTPKAVPGVTNVVAIAAGANHVLALRADGTVYAWGRNDFGQ 627
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + P+++ GL VV I+TG+ HS A+ DG +Y WG N QLG G A
Sbjct: 628 LGDGTTVQRN-TPVQVPGLTN-VVAIATGWDHSLALRADGTVYAWGYNYARQLGDGSTA- 684
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
P V L+ + A G QS+A+ G V +WG G LG+G
Sbjct: 685 NYRQTPAPVPGLTNVVAVTA--GGNQSLALLSSGAVHAWGDNSHGELGNG 732
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 130/308 (42%), Gaps = 55/308 (17%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
PLR SG V++++G HS T DG + WG N++GQLG G + PT V
Sbjct: 38 RPLR-SG-SPRAVRLASGKAHSLLATPDGTVRAWGDNASGQLGDGTTTQR--SSPTAVPG 93
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
L+G A G E S+A+ G G V +WG G+LG G + +P +
Sbjct: 94 LAGAVAVSA--GGEYSLALLGDGTVRAWGNNTYGQLGDGT---------TPHRASPGAVP 142
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP------------ 281
L GV V I AAG H+ + +G V +G A ++ R P
Sbjct: 143 GLSGV-VAI-AAGNNHALALLSDGTVRAWGYNAYGQLGDGTTTQRRTPVAVLGLTGVVAI 200
Query: 282 --------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 333
++++ G + WG+N G LG G+ SP V S + V ++ G H+
Sbjct: 201 AAGENHSLAVLADGTVRAWGNNTYGRLGDGTTTQRTSPVLVS---SLTGVTAIAAGANHS 257
Query: 334 -AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
A +++G + WG+ S G+LG G P V V ++S G
Sbjct: 258 LAVLADGTVRAWGYNAS------------GRLGDGTTTQRATPVAVPGLTGVT--EISAG 303
Query: 393 FNHTGALL 400
H+ ALL
Sbjct: 304 GGHSLALL 311
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D+G+LG G+ R PV + A+A G H+L L G VYA G N Q
Sbjct: 620 WGRNDFGQLGDGTTVQRNTPVQVPGLTN--VVAIATGWDHSLALRADGTVYAWGYNYARQ 677
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG Y P + GL VV ++ G + S A+ G ++ WG NS+G+LG G
Sbjct: 678 LGDGSTANYRQTPAPVPGLTN-VVAVTAGGNQSLALLSSGAVHAWGDNSHGELGNGSTLT 736
Query: 163 KVIPI 167
P+
Sbjct: 737 PPAPV 741
>gi|291223965|ref|XP_002731978.1| PREDICTED: cytochrome P450, family 4, subfamily F, polypeptide
2-like [Saccoglossus kowalevskii]
Length = 1049
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 165/381 (43%), Gaps = 60/381 (15%)
Query: 31 ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
+ + LQR + WG YG+LGLG + + +P + + GG HTL LT+ G
Sbjct: 19 VGTCLQRGMFS-WGANSYGQLGLGHQDDKSKPEKILKIPDGKIVDVTGGGGHTLLLTDCG 77
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
+Y+ G N GQLG+ S+ RI L V++++ G+ AIT G+LY WG N
Sbjct: 78 AIYSCGWNSKGQLGLGHTDNLSVFK-RIDHL-PPVIKVTCGWDFCLAITEVGDLYAWGCN 135
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
GQLG+ + IPTK++ S T AA G S+AVT GK+ SWG+ G+LG
Sbjct: 136 VFGQLGI-PEIDSFTAIPTKIQIFSRNVTSIAA-GLRHSLAVTNDGKLWSWGSARKGQLG 193
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
+ Q + L + P+ + +LE + + +
Sbjct: 194 NDQSKTGYQLL----QRVPKQVHKLENISSVSSGS------------------------- 224
Query: 271 LFQEGNHARRPSLISGGELYTWGSNENGCL-----------GIGSIDVLHSPERVQGP-F 318
+L + G +Y WGSN++ L G D+L P ++ F
Sbjct: 225 -------YHSTALTACGNMYLWGSNKHNQLTNSVQGVVQSGGSSKEDILPVPTKLNLELF 277
Query: 319 SESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
+ V GW H AI+ + +GWG +S+ G S G DV P +
Sbjct: 278 GGRQILAVHSGWTHILAITHDSNV-FGWG--RNDYSQLGISLTGNNCAKKDV--TKPKEL 332
Query: 379 NFGENVKALQVSCGFNHTGAL 399
+++K Q++CG H AL
Sbjct: 333 VILKDIK--QIACGSEHNLAL 351
>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
Length = 527
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P V + + +ACG H+L LT G VYA G N+ G
Sbjct: 99 WGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G ++ P R++G K VV I+ G S A+ GE+Y+WG N NGQLGLG
Sbjct: 159 QVGSGSTANQAI-PRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGS 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A GF ++ +T G+V +WGA G+LG G
Sbjct: 218 SGNQ--PTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYGQLGTGN------ 269
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y ++ E + + ++IAA H SA + G VY++G
Sbjct: 270 --KSNQSYPTPVVVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 114/219 (52%), Gaps = 16/219 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGPHIILATTEGEVFTWGHNGYTQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P ++S K+V++++ G +HS +T DGE+Y WG N++GQ+G G A +
Sbjct: 111 TTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGSTANQA- 169
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
IP +V CL A G SVAV G+V WG G+G+LG G S
Sbjct: 170 -IPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGS---------SG 219
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++ TP + L+G++V+ A GF H+ + + G+VY +G
Sbjct: 220 NQPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWG 258
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 141/349 (40%), Gaps = 64/349 (18%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + +LE
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGNAGNEVLYTTINDEIFVLGTNCSGCLGLGD-VQSTLE 64
Query: 115 PLRISGL-KKEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N QLG G ++P
Sbjct: 65 PRRLDSLSDKKIACLSYGSGPHIILATTEGEVFTWGHNGYTQLGNGTTNHGLVPCQVSTN 124
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 125 -LSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGS---------TANQAIPRRV 174
Query: 233 KEL--EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
V V IA A +D GE+Y
Sbjct: 175 TGCLQNKVVVNIACGQMCSVAVVDT-------------------------------GEVY 203
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGS 349
WG N NG LG+GS +P RV V +V+CG+ HT ++ EG++ WG
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGFAHTLVLTDEGQVYAWG---- 258
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 259 --------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSA 299
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 113/267 (42%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
T++ E+++ G N +G LGLG + + P +++ LS K A L + + T
Sbjct: 38 TINDEIFVLGTNCSGCLGLGDVQSTLEP--RRLDSLSD--KKIACLSYGSGPHIILATTE 93
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG G +LG+G + L + ++ + + + E+ A G HS
Sbjct: 94 GEVFTWGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEV--------ACGSYHSLV--- 142
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE+Y WG N +G +G GS P RV
Sbjct: 143 ---------------------------LTSDGEVYAWGYNNSGQVGSGSTANQAIPRRVT 175
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG + A+ + G++ WG+ G+ GQLG G+ +
Sbjct: 176 GCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGN------------GQLGLGSSGNQPT 223
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CGF HT L +
Sbjct: 224 PCRVAALQGIRVQRVACGFAHTLVLTD 250
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 264 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 --SVILPHLTHFSCTDDVF 333
>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
rerio]
Length = 4647
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 164/363 (45%), Gaps = 66/363 (18%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
G G YGRLGLG ++ P +++ ++ HTL +T G V++ G D+
Sbjct: 426 GKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGDGDY 485
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG N P I G L K VV +S GY HS+A+T DGELY WG+ G+LG
Sbjct: 486 GKLG-HGNSATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVTNDGELYTWGEGDFGRLGHS 544
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSI 217
++ +PT V+ +SG+ Q A G ++AV G+++ S+G G +G+LGHG + +
Sbjct: 545 DSHSRN--VPTLVKDISGV--GQVACGSSHTIAVAQDGRIVWSFGGGDNGKLGHGDTNRV 600
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L G ++ AG S
Sbjct: 601 ---------YRPKVIEALHGFIIRKVCAGSQSSL-------------------------- 625
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
+L S G+++ WG CLG GS + R+ S + + +SCG H A+S
Sbjct: 626 ----ALTSAGQVFAWGC--GSCLGCGSSETTSLRPRLIEELSITKIIDISCGDSHCLALS 679
Query: 338 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGN-DVDYIHPTIVNFGENVKALQVSCGFNH 395
E ++ W G+++ GQ G G+ P V E V Q++ G +H
Sbjct: 680 HENEVFAW------------GNNAMGQCGQGHTSTPVTKPKKVIGLEGVSIQQITAGTSH 727
Query: 396 TGA 398
+ A
Sbjct: 728 SLA 730
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 118/268 (44%), Gaps = 30/268 (11%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWGNG +G+L S P + + + + + CG T + G V A G +G
Sbjct: 3864 LWGNGRHGQLADAG-TSASVPTLAPSLSQ--TQQVVCGQNCTFLVQANGTVLAVGEGSYG 3920
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
+LG N P IS L+ VV Q+ T Y HS A+T GE++ WG G+LG
Sbjct: 3921 RLG-QGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGDGDYGKLGH 3979
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P ++E L G Q A GF+ S VT GK+ ++G+G SGRLG S+
Sbjct: 3980 GNSERQR--RPKQIEGLQGEEVVQLACGFKHSAVVTADGKLFTFGSGDSGRLGQRSTSNK 4037
Query: 218 LGFLRSTS--------------------EYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+ R T+ P++I LEGV ++ A G H + G
Sbjct: 4038 MIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIPALEGVFIEDIAVGCEHILALSNTG 4097
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLIS 285
VY +G ++ N + P L++
Sbjct: 4098 DVYAWGCNCEAQLGLGHSNPVKEPILVT 4125
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 20/229 (8%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G S ++ ++ + ++ G H+ +T G +Y G DFG
Sbjct: 480 WGDGDYGKLGHGNSATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVTNDGELYTWGEGDFG 539
Query: 102 QLGISENIGYSLEPL--RISGLKKEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLG 158
+LG S++ ++ L ISG V Q++ G H+ A+ DG + + +G NG+LG G
Sbjct: 540 RLGHSDSHSRNVPTLVKDISG----VGQVACGSSHTIAVAQDGRIVWSFGGGDNGKLGHG 595
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P +E L G ++ G + S+A+T G+V +WG G LG G
Sbjct: 596 D--TNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSC--LGCGSS---- 647
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
T+ PRLI+EL K+ + G H + V+ +G+ A+
Sbjct: 648 ----ETTSLRPRLIEELSITKIIDISCGDSHCLALSHENEVFAWGNNAM 692
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 126/296 (42%), Gaps = 60/296 (20%)
Query: 88 ETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
+T VY G N QL G E I L+P G + I G + + +++ DG +
Sbjct: 368 DTVMVYVWGSNSSHQLAEGTLEKI---LQPKLAQGFS-DAQMIEAGQYCTFSVSADGAVK 423
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSWGAG 204
GK S G+LGLG + +P +E + ++ G + ++AVT G+V SWG G
Sbjct: 424 ACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGDG 483
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGHG S ++ P++I+ L G V +AG+ HSA + +
Sbjct: 484 DYGKLGHGN---------SATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVTND------- 527
Query: 264 DRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
GELYTWG + G LG + P V+ S V
Sbjct: 528 -----------------------GELYTWGEGDFGRLGHSDSHSRNVPTLVK---DISGV 561
Query: 324 DQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
QV+CG HT A+++ + W +GG G+LGHG+ P ++
Sbjct: 562 GQVACGSSHTIAVAQDGRIVWSFGG----------GDNGKLGHGDTNRVYRPKVIE 607
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 117/275 (42%), Gaps = 60/275 (21%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E+Y+WG +GQL +A V PT LS T+Q G + V G VL+ G
Sbjct: 3861 EVYLWGNGRHGQLADAGTSASV---PTLAPSLSQ--TQQVVCGQNCTFLVQANGTVLAVG 3915
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G GRLG G + YTP +I L+G Y+
Sbjct: 3916 EGSYGRLGQGNSDDL---------YTPTIISALQG----------------------YV- 3943
Query: 263 GDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
V +++ G+ +L GE+++WG + G LG G+ + P++++G E
Sbjct: 3944 ----VTQLVTSYGSDGHSLALTETGEVFSWGDGDYGKLGHGNSERQRRPKQIEGLQGEE- 3998
Query: 323 VDQVSCGWKHTAAIS-EGKILTWGWGGS--------------HGTFSEDGHSSGGQLGHG 367
V Q++CG+KH+A ++ +GK+ T+G G S + DGH G +L
Sbjct: 3999 VVQLACGFKHSAVVTADGKLFTFGSGDSGRLGQRSTSNKMIPERVTALDGHHIGQRLIGL 4058
Query: 368 NDV---DYIHPTIVNFGENVKALQVSCGFNHTGAL 399
D ++ P I+ E V ++ G H AL
Sbjct: 4059 PDAMLKNHNRPQIIPALEGVFIEDIAVGCEHILAL 4093
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 84/185 (45%), Gaps = 11/185 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G +RP V A ++ + G +L LT G V+A G
Sbjct: 584 FGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLG 643
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G SE SL P I L +++ IS G H A++ + E++ WG N+ GQ G G +
Sbjct: 644 CGSSETT--SLRPRLIEELSITKIIDISCGDSHCLALSHENEVFAWGNNAMGQCGQGHTS 701
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSV---AVTGGGKVLSWGAGGSGRLGHGQESSIL 218
V P KV L G+ +Q G S+ AV ++++W L E S
Sbjct: 702 TPVTK-PKKVIGLEGVSIQQITAGTSHSLAWTAVPTDRQLVAWHRPFCVDL----EESTF 756
Query: 219 GFLRS 223
+LRS
Sbjct: 757 TYLRS 761
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 35/221 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ E + RP + + LACG H+ +T G ++ G D G+
Sbjct: 3969 WGDGDYGKLGHGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVVTADGKLFTFGSGDSGR 4028
Query: 103 LGISENIGYSLEPLRISGL---------------------KKEVV---------QISTGY 132
LG + + P R++ L + +++ I+ G
Sbjct: 4029 LG-QRSTSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIPALEGVFIEDIAVGC 4087
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
H A++ G++Y WG N QLGLG + + P V L G +Q + G S A
Sbjct: 4088 EHILALSNTGDVYAWGCNCEAQLGLGH--SNPVKEPILVTTLQGKNIRQISAGRCHSSAW 4145
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
T LS A G + G S+ + + +P ++
Sbjct: 4146 T--TPALSTRASGCSGIQLGLPQSVPPQYNALKDCSPEVLN 4184
>gi|159040146|ref|YP_001539399.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157918981|gb|ABW00409.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 555
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 135/321 (42%), Gaps = 41/321 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN G LG G+ R PV ++ A+A G HTL LT TG + A G N FG+
Sbjct: 111 WGNNTGGELGDGTNTDRTTPVAVKLPTGTTVTAIAVGTFHTLALTSTGALLAWGGNGFGE 170
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + EP+ ++ + I+ G HS A+T G + WGKN+ GQLG G A
Sbjct: 171 LGDGTTTARN-EPVPVNVPAGTTITAIAGGRGHSLALTSTGTVLAWGKNNEGQLGDGTNA 229
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P+ V+ G A G S A+T G VL+WG SG++G G
Sbjct: 230 NSTTPV--DVDLPPGTTVTAIAGGGSNSFALTSAGTVLAWGLNSSGQVGDGT-------- 279
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------------------ 263
+T TP + G V A G HS + G V +G
Sbjct: 280 -TTDRSTPVDVDLPPGTTVTAIAGGEGHSVALTSAGTVLAWGLNSSGQLGDGTTTDSTTP 338
Query: 264 -------DRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
D + + +G+H+ +L S G + WG N +G LG G+ +P V
Sbjct: 339 VDVNLPPDTTITAITAHDGSHSL--ALTSTGTILAWGLNSSGELGDGTTTNRSTPVDVNL 396
Query: 317 PFSESPVDQVSCGWKHTAAIS 337
P + V + G H+ A++
Sbjct: 397 PPGTT-VTAIDNGDDHSMALT 416
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 152/381 (39%), Gaps = 48/381 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D+G+LG G+ PV ++ A+A A++ LT TG V A G N G+
Sbjct: 59 WGENDFGQLGDGTTIDSSTPVDVDLPAGTTITAIAGSDANSFALTSTGAVLAWGNNTGGE 118
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG N + P+ + V I+ G H+ A+T G L WG N G+LG G
Sbjct: 119 LGDGTNTDRT-TPVAVKLPTGTTVTAIAVGTFHTLALTSTGALLAWGGNGFGELGDGTTT 177
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
A+ P+P V G A G S+A+T G VL+WG G+LG G +
Sbjct: 178 ARNEPVPVNVPA--GTTITAIAGGRGHSLALTSTGTVLAWGKNNEGQLGDGTNA------ 229
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRA-- 266
+ TP + G V A G +S + G V +G DR+
Sbjct: 230 ---NSTTPVDVDLPPGTTVTAIAGGGSNSFALTSAGTVLAWGLNSSGQVGDGTTTDRSTP 286
Query: 267 VDKMLFQ-------EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
VD L G +L S G + WG N +G LG G+ +P V P
Sbjct: 287 VDVDLPPGTTVTAIAGGEGHSVALTSAGTVLAWGLNSSGQLGDGTTTDSTTPVDVNLPPD 346
Query: 320 ESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
+ + H+ A+ S G IL WG +S G+LG G + P V
Sbjct: 347 TTITAITAHDGSHSLALTSTGTILAWGL------------NSSGELGDGTTTNRSTPVDV 394
Query: 379 NFGENVKALQVSCGFNHTGAL 399
N + G +H+ AL
Sbjct: 395 NLPPGTTVTAIDNGDDHSMAL 415
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 54/132 (40%), Gaps = 18/132 (13%)
Query: 277 HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 336
HA PS ++ + TWG N+ G LG G+ +P V P + A
Sbjct: 44 HAPSPSGVASDTVLTWGENDFGQLGDGTTIDSSTPVDVDLPAGTTITAIAGSDANSFALT 103
Query: 337 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF--GENVKALQV----S 390
S G +L W G+++GG+LG G + D P V G V A+ V +
Sbjct: 104 STGAVLAW------------GNNTGGELGDGTNTDRTTPVAVKLPTGTTVTAIAVGTFHT 151
Query: 391 CGFNHTGALLEY 402
TGALL +
Sbjct: 152 LALTSTGALLAW 163
>gi|26353276|dbj|BAC40268.1| unnamed protein product [Mus musculus]
Length = 531
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 134/300 (44%), Gaps = 47/300 (15%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+V++++ G HHS A+ DGEL+ WG N+ GQ+G G A + P P
Sbjct: 114 QGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
K+ CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKITNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
TP + L G+ V G+ H+ +L G
Sbjct: 223 TPVRVAALHGMCVNQIVCGYAHTL------------------------------ALTDEG 252
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 345
LY WG+N G LG GS + L SP ++ E ++ +C HT+A G + WG
Sbjct: 253 LLYAWGANTYGQLGTGSKNNLLSPTQIMVE-KERVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 117/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G ++A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +I+ K VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKITNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L G+ Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+++ E E V ++IAA H SA + G VY++G
Sbjct: 276 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 140/313 (44%), Gaps = 53/313 (16%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P ++K V T + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEAGSIRKACV-FGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAVTG-GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V +T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V A G HS + +G ++ +G ++ G+ A +P+
Sbjct: 127 IKQVIEV-----ACGSHHSMALAADGELFAWGYNNCGQV--GSGSTANQPTPRKITNCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV V+Q+
Sbjct: 180 TKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRV-AALHGMCVNQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG ++ GQLG G+ + + PT + E +
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGSKNNLLSPTQI-MVEKERV 286
Query: 387 LQV-SCGFNHTGA 398
+++ +C HT A
Sbjct: 287 IEIAACHSTHTSA 299
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG L P +I K+ V++I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFCCTDDVF 333
>gi|55832766|gb|AAV66896.1| truncated HERC6 [Homo sapiens]
Length = 364
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 141/309 (45%), Gaps = 42/309 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
L+ ER+ G V Q+ CG HT A + G+
Sbjct: 281 LV---------------------------ERIDG-----LVSQIDCGSYHTLAYVHTTGQ 308
Query: 341 ILTWGWGGS 349
++++G G S
Sbjct: 309 VVSFGHGPS 317
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 123/282 (43%), Gaps = 56/282 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L +K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G HS + ++ +V ++WG N +G LG+G
Sbjct: 134 SCGHYHSLALSKDSQV------------------------------FSWGKNSHGQLGLG 163
Query: 304 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
SP+RV+ P+ QV+ G H+ A+S ++GWG +S G
Sbjct: 164 KEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLCGT-SFGWGS----------NSAG 211
Query: 363 QL---GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QL G V P V +N+ + +SCG HT L +
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQ 253
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 110/238 (46%), Gaps = 20/238 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
+ G P+L++ ++G+ +I + A + G+V FG D
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPSD 318
>gi|159039899|ref|YP_001539152.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157918734|gb|ABW00162.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 554
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 163/384 (42%), Gaps = 54/384 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG DYG LG GS PVV S ++ A+A GG H+L LT G V A G ND GQ
Sbjct: 61 WGQNDYGELGNGSTAGSNTPVVVSLPSATTVTAVAGGGDHSLALTSAGTVLAWGRNDHGQ 120
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +EP+ + V I+ G H+ A+T G + WG+N GQLG G
Sbjct: 121 LGDGSTVDK-VEPVSVDFPAGTTVTAIAGGDDHNLALTSAGTVLAWGRNHRGQLGDGSTV 179
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
K+ P+ V+ +G A G + ++A+T G V +WG+ SG LG G
Sbjct: 180 DKLEPV--SVDFPAGTTVTAIAGGDDHNLAITSTGGVFTWGSNSSGELGDG--------- 228
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
+ TP L+ AG HS + V+ +GD + ++ GN+ +
Sbjct: 229 TTIDRTTPILVGLPG--TTVTTTAGGGHSFAVTSADTVHAWGDNSDGQL--GNGNNVDQL 284
Query: 281 -PSLIS-----------GGELYT-----------WGSNENGCLGIGSIDVLHSPERVQGP 317
P ++S GG ++ WG+N+ G LG G+ P V P
Sbjct: 285 EPVVVSMPLGATVTAIAGGNDHSLALTAAGALLAWGNNDVGQLGNGNTLDQSEPVDVNLP 344
Query: 318 FSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 376
+ + H+ A++ G +L W G + G+LG G+ +D P
Sbjct: 345 TGTTITAIATRDSDHSLALTAAGSVLAW------------GENDDGELGDGSTLDRSEPV 392
Query: 377 IVNFGENVKALQVSCGFNHTGALL 400
VN ++ G H+ AL+
Sbjct: 393 DVNLPTGTTVTAIAAGDGHSLALV 416
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 128/307 (41%), Gaps = 57/307 (18%)
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGK 149
+ A G ND+G+LG G S P+ +S V ++ G HS A+T G + WG+
Sbjct: 57 TILAWGQNDYGELGNGSTAG-SNTPVVVSLPSATTVTAVAGGGDHSLALTSAGTVLAWGR 115
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N +GQLG G KV P+ V+ +G A G + ++A+T G VL+WG G+L
Sbjct: 116 NDHGQLGDGSTVDKVEPV--SVDFPAGTTVTAIAGGDDHNLALTSAGTVLAWGRNHRGQL 173
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
G G + + P + G V A G H+ I
Sbjct: 174 GDGS---------TVDKLEPVSVDFPAGTTVTAIAGGDDHNLAI---------------- 208
Query: 270 MLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 329
S G ++TWGSN +G LG G+ +P V P + + G
Sbjct: 209 --------------TSTGGVFTWGSNSSGELGDGTTIDRTTPILVGLPGTTV---TTTAG 251
Query: 330 WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 389
H+ A++ + W G +S GQLG+GN+VD + P +V+ +
Sbjct: 252 GGHSFAVTSADTV-HAW----------GDNSDGQLGNGNNVDQLEPVVVSMPLGATVTAI 300
Query: 390 SCGFNHT 396
+ G +H+
Sbjct: 301 AGGNDHS 307
>gi|449484061|ref|XP_002195626.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Taeniopygia
guttata]
Length = 526
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 138/302 (45%), Gaps = 47/302 (15%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-S 106
G LG G ++S P + + L+ G G H + TE G VY G N + QLG +
Sbjct: 52 GCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGT 111
Query: 107 ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N G+ + + + K+V++++ G HHS +T DGE+Y WG N++GQ+G G A + P
Sbjct: 112 TNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ--P 169
Query: 167 IPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
IP +V CL A G S+AV G+V WG G+G+LG G S +
Sbjct: 170 IPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGS---------SGN 220
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
+ TP I L+G++V+ A G+ H+ + + G++
Sbjct: 221 QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQI-------------------------- 254
Query: 286 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILT 343
Y WG+N G LG G+ P V + ++ +C HT+A G++
Sbjct: 255 ----YAWGANSYGQLGTGNKSNQSYPTTVVVD-KDRVIEIAACHSAHTSAAKTQSGQVYM 309
Query: 344 WG 345
WG
Sbjct: 310 WG 311
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 117/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ + P V + + +ACG H++ LT G VY G N+ G
Sbjct: 99 WGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++ K VV I+ G S A+ +GE+Y+WG N NGQLGLG
Sbjct: 159 QVGSGSTANQPI-PRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGS 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P ++ L GI ++ A G+ ++ +T G++ +WGA G+LG G
Sbjct: 218 SGNQ--PTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGN------ 269
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y ++ + + V ++IAA H SA ++G+VY++G
Sbjct: 270 --KSNQSYPTTVVVDKDRV-IEIAACHSAHTSAAKTQSGQVYMWG 311
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 144/348 (41%), Gaps = 62/348 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ TE V+ G+N G LG + + ++E
Sbjct: 6 KWPIFSLCSPEEIKLIRQACVFGSAGNEVLYATENDEVFVLGMNCSGCLGTGD-MQSTIE 64
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE+Y WG N+ QLG G +P
Sbjct: 65 PRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTN 124
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
L + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 125 -LVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGS---------TANQPIPRRV 174
Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYT 291
K+ + A G + S + ENG VY+
Sbjct: 175 TSCLQNKIVVNIACGQMCSMAVVENGEVYV------------------------------ 204
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSH 350
WG N NG LG+GS +P R+ V +V+CG+ HT ++ EG+I WG
Sbjct: 205 WGYNGNGQLGLGSSGNQPTPCRI-AALQGIRVQRVACGYAHTLVLTDEGQIYAWG----- 258
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 259 -------ANSYGQLGTGNKSNQSYPTTVVVDKDRVIEIAACHSAHTSA 299
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
QLG S P + K V++I+ + H S+A T G++YMWG+
Sbjct: 264 QLGTGNKSNQSY-PTTVVVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQ 312
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 109/267 (40%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
T + E+++ G N +G LG G + + P +++ L G K A L + V T
Sbjct: 38 TENDEVFVLGMNCSGCLGTGDMQSTIEP--RRLDSLCG--KKIACLSYGSGPHVVLATEE 93
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + GF+ ++ L KV A G HS
Sbjct: 94 GEVYTWGHNAYSQLGNGTTNH--GFVPC------QVSTNLVNKKVIEVACGSHHSM---- 141
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE+YTWG N +G +G GS P RV
Sbjct: 142 --------------------------VLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVT 175
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
V ++CG + A+ E G++ WG+ G+ GQLG G+ +
Sbjct: 176 SCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGN------------GQLGLGSSGNQPT 223
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P + + ++ +V+CG+ HT L +
Sbjct: 224 PCRIAALQGIRVQRVACGYAHTLVLTD 250
>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC2-like [Xenopus (Silurana) tropicalis]
Length = 4845
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 46/301 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4076 WGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGR 4135
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4136 LGHGDSED-QLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4193
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4194 -GSDGCKVPMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4250
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4251 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4281
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ +++V+CG HT A S
Sbjct: 4282 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACGSAHTLAWSTS 4332
Query: 340 K 340
K
Sbjct: 4333 K 4333
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 170/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3970 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4027
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4028 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4085
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L G A G S +T G++ +WG G GRLGHG
Sbjct: 4086 HGNRSP--CDRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGRLGHGD--- 4140
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4141 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4194
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4195 SDGCKVPMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4254
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4255 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4301
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4302 IQRPRLVAALQGKKINRVACGSAHTLA 4328
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 135/298 (45%), Gaps = 56/298 (18%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L+ T +++ G D G+LG + + EP +S L K+V+ I+ G +
Sbjct: 504 GQHYLALSATSELFSWGCGDGGRLGHGDTVSLE-EPKLVSALSGKQTGKQVIHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT DGELY WG+ + G+LG G + +P+ V L G+ + G Q+++V
Sbjct: 563 SAAITADGELYTWGRGNYGRLGHGSSEDQTVPM--LVTGLKGLKVVDVSCGSGDAQTLSV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + + G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
I ++G+VY +G ++ H R P +++G GE+Y
Sbjct: 672 ITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVDVAVGSTHCLALTESGEVY 731
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGW 346
+WGSN+ C ++ + PV V G KH IS G ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRI------------AKPVPSVLPGLDSKHIVGISCGPAQSFAW 776
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 117/228 (51%), Gaps = 19/228 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-KHSLKA---LACGGAHTLFLTETGCVYATGLN 98
WG GD GRLG G S P + SA K + K +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVSLEEPKLVSALSGKQTGKQVIHIACGSTYSAAITADGELYTWGRG 578
Query: 99 DFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQL 155
++G+LG + ++ P+ ++GLK +VV +S +G + ++T +G+++ WG G+L
Sbjct: 579 NYGRLGHGSSEDQTV-PMLVTGLKGLKVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKL 637
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 GRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEE 695
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+++ L+G KV A G H + E+G VY +G
Sbjct: 696 HV---------RYPKIMNGLQGKKVVDVAVGSTHCLALTESGEVYSWG 734
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 149/348 (42%), Gaps = 71/348 (20%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C A + +AC L L+ G +Y N+ +L P + GL
Sbjct: 442 PIQCEALANLGVTQVACAEKCFLILSRNGKLYTQAYNN-----------NTLGPQLVQGL 490
Query: 122 -KKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+ +V+I+ H A++ EL+ WG G+LG G + + P V LSG
Sbjct: 491 ASRNIVKIAAHPDGQHYLALSATSELFSWGCGDGGRLGHGDTVS--LEEPKLVSALSGKQ 548
Query: 179 T-KQA---ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
T KQ A G S A+T G++ +WG G GRLGHG S + P L+
Sbjct: 549 TGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGS---------SEDQTVPMLVTG 599
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGS 294
L+G+KV + G GD A+ S+ G++++WG
Sbjct: 600 LKGLKVVDVSCGS---------------GD-------------AQTLSVTENGQVWSWGD 631
Query: 295 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTF 353
+ G LG G D +P+ ++ + + +V CG + + AI+ +G++ +WG G +
Sbjct: 632 GDYGKLGRGGSDGCKTPKLIEK-LQDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQ--- 687
Query: 354 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHG + +P I+N + K + V+ G H AL E
Sbjct: 688 ---------RLGHGTEEHVRYPKIMNGLQGKKVVDVAVGSTHCLALTE 726
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 128/272 (47%), Gaps = 45/272 (16%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3003 GGSKSLFAVTAEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3063 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3120
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G++ +WG G GRLGHG +T++ P+++K L G +V A G
Sbjct: 3121 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACG-------- 3163
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
A+ +L G +++WG + G LG G + + P+ +
Sbjct: 3164 --------------------SRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3203
Query: 315 QGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+ + V Q+ CG + + A+++ ++ W W
Sbjct: 3204 ER-LNGQAVCQIECGAQFSLALTKSGVV-WTW 3233
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 113/258 (43%), Gaps = 52/258 (20%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2957 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTAE 3014
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVA---VHSG---- 3059
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3060 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3098
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AAI S G++ TWG G G+LGHG++ +
Sbjct: 3099 A-LKTKRIRDIACGSSHSAAITSSGELYTWGLG------------EYGRLGHGDNTTQLK 3145
Query: 375 PTIVNFGENVKALQVSCG 392
P +V + +QV+CG
Sbjct: 3146 PKMVKVLLGHRVIQVACG 3163
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 132/296 (44%), Gaps = 39/296 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3135 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3192
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +W + +
Sbjct: 3193 -GSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTWXX--------TKHCLAVX 3243
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F Y + EL +KV + R + G + + N +
Sbjct: 3244 F------YYXNYLLELFLIKVSV---------------RFVLLGQYLXTCATYFKLNIIK 3282
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
++ ++Y WG N++G G G+ V P V G + +V+CG H+ A
Sbjct: 3283 ---IVISKKVYAWGDNDHGQQGNGTTTVNRKPTLVHG-LEGQKITRVACGSSHSVA 3334
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 110/252 (43%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3965 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4022
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4023 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4065
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4066 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTE 4105
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD ++ G H+A I+ G++ TWG G G+LGHG+ D + P +V
Sbjct: 4106 VVD-IAAGGAHSACITAAGELYTWGKG------------RYGRLGHGDSEDQLKPKLVEA 4152
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 4153 LQGYRVIDIACG 4164
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 10/131 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ +T+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQR 688
Query: 103 LG--ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
LG E++ Y P ++GL+ K+VV ++ G H A+T GE+Y WG N Q L
Sbjct: 689 LGHGTEEHVRY---PKIMNGLQGKKVVDVAVGSTHCLALTESGEVYSWGSNDQCQHFDTL 745
Query: 156 GLGKKAAKVIP 166
+ K V+P
Sbjct: 746 RIAKPVPSVLP 756
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
WG GD RLG G+ E P + + + + +A G H L LTE+G VY+ G ND
Sbjct: 681 WGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVDVAVGSTHCLALTESGEVYSWGSNDQCQ 740
Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
F L I++ + P + GL K +V IS G S A
Sbjct: 741 HFDTLRIAKPV-----PSVLPGLDSKHIVGISCGPAQSFA 775
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 60/122 (49%), Gaps = 17/122 (13%)
Query: 282 SLISGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSC--GWKHTAAIS- 337
++ + G++Y G NG LG+G S + P ++ S V +V+ G +H A++
Sbjct: 3010 AVTAEGKVYACGEATNGRLGLGISSGTVPIPRQITA-LSNYVVKKVAVHSGGRHATALTV 3068
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
+GK+ +WG G G+LGH + ++ P ++ + + ++CG +H+
Sbjct: 3069 DGKVFSWGEGDD------------GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3116
Query: 398 AL 399
A+
Sbjct: 3117 AI 3118
>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 3151
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 139/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG GS RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 2371 WGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 2430
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 2431 LGHSDSED-QLKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 2488
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 2489 -GSDGCKVPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDYHRLGHGSDDHV-- 2545
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G K A G LH C E+G
Sbjct: 2546 -------RRPRQVQGLQGKKAIAIATGSLHCVCCTEDG---------------------- 2576
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 2577 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 2627
Query: 340 KILTWG 345
K + G
Sbjct: 2628 KPASAG 2633
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 138/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 1376 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 1435
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG + L+P + L VVQ++ G + A+T +G ++ WG G+LG G
Sbjct: 1436 LGHGDTT-TQLKPKMVKVLLGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 1493
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 1494 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 1550
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 1551 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 1584
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 1585 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 1628
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 143/304 (47%), Gaps = 50/304 (16%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
VVQ++ G A+TV+G++Y G+ +NG+LGLG + V P+P +V LS K+ A+
Sbjct: 1299 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTV-PLPRQVTALSSYVVKKVAV 1357
Query: 185 --GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
G + A+T GKV SWG G G+LGH F R + PRLI+ L+ +++
Sbjct: 1358 HSGGRHATALTVDGKVFSWGEGDDGKLGH--------FSRMNCD-KPRLIEALKTKRIRD 1408
Query: 243 AAAGFLHSACIDENGRVYIFG-----------------DRAVDKMLFQE-------GNHA 278
A G HSA + +G +Y +G + V +L A
Sbjct: 1409 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQVACGSRDA 1468
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
+ +L G +++WG + G LG G + + P+ ++ + V Q+ CG + + A+++
Sbjct: 1469 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER-LNGQGVCQIECGAQFSLALTK 1527
Query: 339 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
G + TWG G +LGHG+DV P +V K + V+ G H
Sbjct: 1528 SGVVWTWGKGDYF------------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCL 1575
Query: 398 ALLE 401
A+ +
Sbjct: 1576 AVTD 1579
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 167/386 (43%), Gaps = 57/386 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P C A L GG TLF +T G +YATG G
Sbjct: 2265 WGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQL-IGGEQTLFAVTADGKLYATGYGAGG 2323
Query: 102 QLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 2324 RLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 2381
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 2382 GSRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD---- 2435
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 2436 -----SEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 2490
Query: 276 NHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + P +L G +YTWG + LG GS D + P +
Sbjct: 2491 DGCKVPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDYHRLGHGSDDHVRRPRQ 2550
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
VQG + + ++ G H +E G++ TW G + GQLG G
Sbjct: 2551 VQGLQGKKAI-AIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNAI 2597
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 2598 QRPRLVAALQGKKVNRVACGSAHTLA 2623
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +++ L VV+ + +G H
Sbjct: 1304 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQVTALSSYVVKKVAVHSGGRH 1363
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 1364 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 1421
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 1422 SGELYTWGLGEYGRLGHGD---------TTTQLKPKMVKVLLGHRVVQVACGSRDAQTLA 1472
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 1473 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 1532
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 1533 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 1587
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 1588 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 1628
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 100/241 (41%), Gaps = 50/241 (20%)
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
G++ ++ I +P+ E LS + Q A G + AVT GKV + G +GRLG G
Sbjct: 1273 GRIRAEEEDLAAIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLG 1332
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
S + PR + L VK A +HS
Sbjct: 1333 LSSGTVPL--------PRQVTALSSYVVKKVA---VHSG--------------------- 1360
Query: 273 QEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 332
G HA +L G++++WG ++G LG S P ++ + ++CG H
Sbjct: 1361 --GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSH 1415
Query: 333 TAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 391
+AA+ S G++ TWG G G+LGHG+ + P +V + +QV+C
Sbjct: 1416 SAALTSSGELYTWGLG------------EYGRLGHGDTTTQLKPKMVKVLLGHRVVQVAC 1463
Query: 392 G 392
G
Sbjct: 1464 G 1464
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 2260 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 2317
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 2318 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 2360
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG GS P ++
Sbjct: 2361 --------------------ALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIE 2400
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 2401 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 2447
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 2448 LQGHRVVGIACG 2459
>gi|302807678|ref|XP_002985533.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
gi|300146739|gb|EFJ13407.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
Length = 228
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 115/232 (49%), Gaps = 14/232 (6%)
Query: 43 WGNGDYGRLGLGSLESRWR---PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG G++G+LGL + P + +ACG +HTL LT +G VY+ G
Sbjct: 4 WGCGEFGQLGLKDAAGVFNSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQGT 63
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG LG S + S +VQI+ G +HS A+TV+G+L+ WG+ GQLG G
Sbjct: 64 FGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCGS 123
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P+P V LS Q G + ++A+ G++ SWG G G+ GHG + +IL
Sbjct: 124 VENHLQPVP--VTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNIL- 180
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
P+L+ LE + A+AG H+ + G VY +GD ++L
Sbjct: 181 --------VPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQGQVL 224
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 108/259 (41%), Gaps = 56/259 (21%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVI--PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
L WG GQLGL K AA V P+P + + + A G ++A+TG G V S+
Sbjct: 1 LVSWGCGEFGQLGL-KDAAGVFNSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSF 59
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G G LGHG S +P ++ L G+ + A G HS
Sbjct: 60 GQGTFGALGHGTTESC---------SSPVIVDSLWGLGIVQIACGDNHSC---------- 100
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L G+L++WG + G LG GS++ P V S+
Sbjct: 101 --------------------ALTVEGQLFSWGRGKYGQLGCGSVENHLQPVPVT-ALSDR 139
Query: 322 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
+ QV CG +T AI S+G++ +WG H GQ GHG + + P +V
Sbjct: 140 LLTQVVCGADYTMAIDSDGQLFSWG------------HGHWGQTGHGTQDNILVPKLVCS 187
Query: 381 GENVKALQVSCGFNHTGAL 399
EN +Q S G H AL
Sbjct: 188 LENDNIVQASAGARHAVAL 206
>gi|118349964|ref|XP_001008263.1| Regulator of chromosome condensation [Tetrahymena thermophila]
gi|89290030|gb|EAR88018.1| Regulator of chromosome condensation [Tetrahymena thermophila
SB210]
Length = 2290
Score = 113 bits (282), Expect = 2e-22, Method: Composition-based stats.
Identities = 79/268 (29%), Positives = 124/268 (46%), Gaps = 48/268 (17%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLN---------------------DFGQLGISEN 108
K +K ++CG HTL +T+ G ++ G+ GQLG +EN
Sbjct: 267 KDGIKHVSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQLLLQNKSKIQKGQLG-NEN 325
Query: 109 IGYSLEPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
EP + K++ +Q++ G HS A+T +G+++ WGKN+ GQLG G + ++ P
Sbjct: 326 FVNVYEPTELLVWPKRKFIQVACGSSHSMALTDNGQIFTWGKNTRGQLGQGHRNDQLKPT 385
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
+E + G + S ++ ++ +WG G RLGHG +T E
Sbjct: 386 MIIIE----VMATSICSGDQHSAFISDEKELYTWGNGQYFRLGHGV---------TTDEL 432
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-RRPSLISG 286
P+ + LE V V + G H+ I G VY +GD K+ QE N + P+ +S
Sbjct: 433 YPKKVVVLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGKLGVQENNKSLHLPTRVSA 492
Query: 287 GE-----------LYTWGSNENGCLGIG 303
G LY+WGS++ G LGIG
Sbjct: 493 GGLHSMALTDQGILYSWGSSKGGVLGIG 520
Score = 73.6 bits (179), Expect = 2e-10, Method: Composition-based stats.
Identities = 48/140 (34%), Positives = 64/140 (45%), Gaps = 12/140 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNG Y RLG G P E + ++CG HTL +T G VYA G G+
Sbjct: 415 WGNGQYFRLGHGVTTDELYPKKVVVLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGK 474
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG--KK 160
LG+ EN P R+S G HS A+T G LY WG + G LG+G +
Sbjct: 475 LGVQENNKSLHLPTRVSA----------GGLHSMALTDQGILYSWGSSKGGVLGIGFQRD 524
Query: 161 AAKVIPIPTKVECLSGIFTK 180
+P K+ ++ I +K
Sbjct: 525 NKDCYSLPQKIRTVAKIQSK 544
Score = 60.8 bits (146), Expect = 1e-06, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 25/202 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G + +P + + ++ G H+ F+++ +Y G + +
Sbjct: 365 WGKNTRGQLGQGHRNDQLKPTMI--IIEVMATSICSGDQHSAFISDEKELYTWGNGQYFR 422
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG L P ++ L+ V +S G H+ AIT +G +Y WG +G+LG+ ++
Sbjct: 423 LGHGVTTD-ELYPKKVVVLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGKLGV-QEN 480
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
K + +PT+V + G S+A+T G + SWG+ G LG +GF
Sbjct: 481 NKSLHLPTRV-----------SAGGLHSMALTDQGILYSWGSSKGGVLG-------IGFQ 522
Query: 222 RSTSE-YT-PRLIKELEGVKVK 241
R + Y+ P+ I+ + ++ K
Sbjct: 523 RDNKDCYSLPQKIRTVAKIQSK 544
Score = 55.5 bits (132), Expect = 4e-05, Method: Composition-based stats.
Identities = 55/221 (24%), Positives = 91/221 (41%), Gaps = 34/221 (15%)
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
K + G ++ +T G + +G G G+L +E +L L++ S K
Sbjct: 271 KHVSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQLL--LQNKS-------------K 315
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
++ G + + E + ++ R K + + +L G+++TWG N G
Sbjct: 316 IQKGQLGNENFVNVYEPTELLVWPKR---KFIQVACGSSHSMALTDNGQIFTWGKNTRGQ 372
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGH 358
LG G + P + E + G +H+A IS E ++ TWG G
Sbjct: 373 LGQGHRNDQLKPTMI---IIEVMATSICSGDQHSAFISDEKELYTWGNGQYF-------- 421
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+LGHG D ++P V E+V VSCG HT A+
Sbjct: 422 ----RLGHGVTTDELYPKKVVVLEDVYVTHVSCGMTHTLAI 458
Score = 48.9 bits (115), Expect = 0.004, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 14/166 (8%)
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
P I K +++ +S Y H+ AI+ G Y WG N QLGLG K IP K++
Sbjct: 781 PFLIPYFKNKIIFMSCSYTHAIAISHKGVAYSWGSNKYYQLGLG-YMCKYNHIPQKIQ-- 837
Query: 175 SGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
+ TK+ + S +T G++ ++G SG LGH +++ + SE P++
Sbjct: 838 GALETKRIIMSTCSDRFSALLTDKGEIWTFGTSDSGVLGHDEKNYYV-----VSE--PKM 890
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
I ++ + + +A+ A ++ ++Y +G+ ++ Q N+
Sbjct: 891 INDIPPM-IFLASGPQGMMAITEQKRQIYAWGNNLYGQLGIQITNN 935
Score = 48.9 bits (115), Expect = 0.004, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG-LKKEVVQI 128
K+ + ++C H + ++ G Y+ G N + QLG+ Y+ P +I G L+ + + +
Sbjct: 788 KNKIIFMSCSYTHAIAISHKGVAYSWGSNKYYQLGLGYMCKYNHIPQKIQGALETKRIIM 847
Query: 129 STGYHHSSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
ST SA+ D GE++ +G + +G LG +K V+ P + + + A G +
Sbjct: 848 STCSDRFSALLTDKGEIWTFGTSDSGVLGHDEKNYYVVSEPKMINDIPPMIF--LASGPQ 905
Query: 188 QSVAVTGGGK-VLSWGAGGSGRLG 210
+A+T + + +WG G+LG
Sbjct: 906 GMMAITEQKRQIYAWGNNLYGQLG 929
Score = 45.4 bits (106), Expect = 0.047, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPV---VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ Y +LGLG + ++ + + A E + C + LT+ G ++ G +D
Sbjct: 813 WGSNKYYQLGLGYM-CKYNHIPQKIQGALETKRIIMSTCSDRFSALLTDKGEIWTFGTSD 871
Query: 100 FGQLGISENIGYSL-EPLRISGLKKEVVQISTGYHHSSAITVDG-ELYMWGKNSNGQLGL 157
G LG E Y + EP I+ + ++ +++G AIT ++Y WG N GQLG+
Sbjct: 872 SGVLGHDEKNYYVVSEPKMINDIPP-MIFLASGPQGMMAITEQKRQIYAWGNNLYGQLGI 930
Score = 41.2 bits (95), Expect = 0.86, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 16/116 (13%)
Query: 268 DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQV 326
+K++F ++ ++ G Y+WGSN+ LG+G + H P+++QG +
Sbjct: 789 NKIIFMSCSYTHAIAISHKGVAYSWGSNKYYQLGLGYMCKYNHIPQKIQGALETKRIIMS 848
Query: 327 SCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI--HPTIVN 379
+C + +A +++ G+I T+ G S G LGH Y+ P ++N
Sbjct: 849 TCSDRFSALLTDKGEIWTF------------GTSDSGVLGHDEKNYYVVSEPKMIN 892
Score = 40.0 bits (92), Expect = 2.2, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 10/89 (11%)
Query: 323 VDQVSCGWKHTAAIS-EGKILTWGWGGSHGTF---------SEDGHSSGGQLGHGNDVDY 372
+ VSCG HT I+ +G I +G G F GQLG+ N V+
Sbjct: 270 IKHVSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQLLLQNKSKIQKGQLGNENFVNV 329
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGALLE 401
PT + K +QV+CG +H+ AL +
Sbjct: 330 YEPTELLVWPKRKFIQVACGSSHSMALTD 358
>gi|390348536|ref|XP_781445.2| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Strongylocentrotus purpuratus]
Length = 539
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 171/369 (46%), Gaps = 65/369 (17%)
Query: 39 FAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
FA L WG YG+LGLG + P F + +K + GG HT+FLT G ++ G
Sbjct: 149 FAYLAWGANSYGQLGLGHQKDHLLPENLKTFPE-DVKTIVGGGGHTVFLTGNGDLHVCGS 207
Query: 98 NDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
N+ GQLG+ + + +R+ L+ + +I+ G++H+ AIT + EL WG N++GQL
Sbjct: 208 NNKGQLGLGHTSDIN-KLVRVPDLRP-LKKIACGWNHTVAITENDELLCWGSNTHGQL-- 263
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAAL---GFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
++ P ++E LSG+ + A G ++AV+ G++ +WGAG G+LG
Sbjct: 264 -THKESIVTKPRQIE-LSGVDCPRFAAISGGLRHTLAVSTDGQLWTWGAGKKGQLGWTDS 321
Query: 215 SSILGFLRSTSEYTPRLIKELE-GVKVKIAAAGFLHSACIDENGRVYIFG---------- 263
+ + + P +KE + VK AAG HSA + + G +YI+G
Sbjct: 322 KMRVPHQWNKPVHIP--VKEDDVDVKFVQVAAGAYHSAALSDMGILYIWGCNKWSQLAQP 379
Query: 264 --------DRAVDKMLFQ----EGNHARRPSLISGGE---LYTWGSNENGCLG------- 301
+ +D LF +G H+ +++ E +YTWG N+ G LG
Sbjct: 380 KSSNPISTPKRLDPALFDGLTIKGIHSGWTHMLAITEDESVYTWGRNDYGQLGRPAAKSI 439
Query: 302 --------------IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGW 346
+ D H P + Q+ CG +H+ AI+ + K+L WGW
Sbjct: 440 PNGSAESESNATPTTTTPDCCHVPTEIS---ILKNAKQIVCGAEHSLAITKDDKLLAWGW 496
Query: 347 GGSHGTFSE 355
HG ++
Sbjct: 497 -NEHGMCAD 504
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 98/229 (42%), Gaps = 49/229 (21%)
Query: 43 WGNGDYGRLGLGSLESR----W-RPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYA 94
WG G G+LG + R W +PV E +A G H+ L++ G +Y
Sbjct: 308 WGAGKKGQLGWTDSKMRVPHQWNKPVHIPVKEDDVDVKFVQVAAGAYHSAALSDMGILYI 367
Query: 95 TGLNDFGQLGISEN-----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
G N + QL ++ L+P GL + I +G+ H AIT D +Y WG+
Sbjct: 368 WGCNKWSQLAQPKSSNPISTPKRLDPALFDGLT--IKGIHSGWTHMLAITEDESVYTWGR 425
Query: 150 NSNGQLGLGKKAAKVIP---------------------IPTKVECLSGIFTKQAALGFEQ 188
N GQLG + AAK IP +PT++ L KQ G E
Sbjct: 426 NDYGQLG--RPAAKSIPNGSAESESNATPTTTTPDCCHVPTEISILKN--AKQIVCGAEH 481
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
S+A+T K+L+WG G G ++++ + P+ ++ L+G
Sbjct: 482 SLAITKDDKLLAWGWNEHGMCADGTKTNV---------FLPKQVQGLDG 521
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 126/294 (42%), Gaps = 63/294 (21%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
+K + GG HT+FLT G ++ G N+ GQLG+ + + +R+ L+ + QI G
Sbjct: 23 DVKTIVGGGGHTVFLTGNGDLHVCGSNNKGQLGLGHTSDIN-KLVRVPDLRP-LKQIVCG 80
Query: 132 YHHSSAIT-VDGELYMWGKNSNGQLGLGKKAAKVIPIPT-------KVECLSGIFTKQAA 183
++H+ AIT DG L + + ++G ++IP+P V G + ++
Sbjct: 81 WNHTVAITGTDGSLELLHRGQFNEVG-----RELIPVPECSWEETLPVAVRVGAGSHESC 135
Query: 184 LGFEQSV-AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVK 241
+G + V L+WGA G+LG G + L P +K E VK
Sbjct: 136 VGVADVLNGVYTLFAYLAWGANSYGQLGLGHQKDHL---------LPENLKTFPEDVKTI 186
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLG 301
+ G +F GN G+L+ GSN G LG
Sbjct: 187 VGGGGH----------------------TVFLTGN----------GDLHVCGSNNKGQLG 214
Query: 302 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWGWGGSHGTFS 354
+G ++ RV P+ +++CGW HT AI+E ++L WG +HG +
Sbjct: 215 LGHTSDINKLVRVP---DLRPLKKIACGWNHTVAITENDELLCWG-SNTHGQLT 264
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 59/138 (42%), Gaps = 23/138 (16%)
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI------------SENIGYSLE- 114
F+ ++K + G H L +TE VY G ND+GQLG SE+
Sbjct: 396 FDGLTIKGIHSGWTHMLAITEDESVYTWGRNDYGQLGRPAAKSIPNGSAESESNATPTTT 455
Query: 115 -------PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
P IS LK QI G HS AIT D +L WG N +G G K + +
Sbjct: 456 TPDCCHVPTEISILKN-AKQIVCGAEHSLAITKDDKLLAWGWNEHGMCADGTKTN--VFL 512
Query: 168 PTKVECLSGIFTKQAALG 185
P +V+ L G + +G
Sbjct: 513 PKQVQGLDGQVASKVGVG 530
>gi|119626423|gb|EAX06018.1| hect domain and RLD 6, isoform CRA_a [Homo sapiens]
Length = 385
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 141/309 (45%), Gaps = 42/309 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
L+ ER+ G V Q+ CG HT A + G+
Sbjct: 281 LV---------------------------ERIDG-----LVSQIDCGSYHTLAYVHTTGQ 308
Query: 341 ILTWGWGGS 349
++++G G S
Sbjct: 309 VVSFGHGPS 317
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 123/282 (43%), Gaps = 56/282 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L +K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G HS + ++ +V ++WG N +G LG+G
Sbjct: 134 SCGHYHSLALSKDSQV------------------------------FSWGKNSHGQLGLG 163
Query: 304 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
SP+RV+ P+ QV+ G H+ A+S ++GWG +S G
Sbjct: 164 KEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLCGT-SFGWGS----------NSAG 211
Query: 363 QL---GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QL G V P V +N+ + +SCG HT L +
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQ 253
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 110/238 (46%), Gaps = 20/238 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
+ G P+L++ ++G+ +I + A + G+V FG D
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPSD 318
>gi|310825568|ref|YP_003957926.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|309398640|gb|ADO76099.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 482
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 132/289 (45%), Gaps = 39/289 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN YG+LG GS R PV + + A+A G H+L L G V+A G ND+GQ
Sbjct: 197 WGNNGYGQLGNGSTAHRATPVQVPGLQ--GVVAVAGGYMHSLALCADGTVWAWGFNDYGQ 254
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + +S P+ + GL +VV ++ G HS A+ DG ++ WG N GQLG
Sbjct: 255 LGNGTTV-HSPTPVPVPGL-SQVVSVAAGGFHSLALCADGTVWAWGNNGFGQLGEAVSTQ 312
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P +VE L + A GF S+AV GG + SWG SG+LG+G S
Sbjct: 313 RT--KPGRVEGLREVVA--VAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFS------- 361
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP- 281
S P ++ L V AAG +HS + +G V+ +G ++ + P
Sbjct: 362 --SSARPAPVQGLG--AVTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPERATPV 417
Query: 282 -------------------SLISGGELYTWGSNENGCLGIGSIDVLHSP 311
S+ +GG L+ WG N+ G LG ++ P
Sbjct: 418 RVPGLQGEVAVAAGFYHSLSVQAGGSLWAWGLNDFGQLGDSEAPLMPVP 466
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 148/324 (45%), Gaps = 43/324 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG G+ +R P + A+A GG+H L L G V+A G N +GQL
Sbjct: 148 GSNSAGQLGNGTTAARSAPRPVPGLSR--AVAVAAGGSHALALCADGTVWAWGNNGYGQL 205
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
G + + + P+++ GL+ VV ++ GY HS A+ DG ++ WG N GQLG G
Sbjct: 206 G-NGSTAHRATPVQVPGLQG-VVAVAGGYMHSLALCADGTVWAWGFNDYGQLGNGTTVHS 263
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
P+P V LS + + AA GF S+A+ G V +WG G G+LG S
Sbjct: 264 PTPVP--VPGLSQVVSV-AAGGF-HSLALCADGTVWAWGNNGFGQLGEAV---------S 310
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
T P ++ L +V A GF HS + G ++ +G+ ++ + + RP+
Sbjct: 311 TQRTKPGRVEGLR--EVVAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARPAP 368
Query: 284 ISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
+ G G ++ WG NE G LG +P RV G E
Sbjct: 369 VQGLGAVTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPERATPVRVPGLQGEV-- 426
Query: 324 DQVSCGWKHTAAISEGKILTWGWG 347
V+ G+ H+ ++ G L W WG
Sbjct: 427 -AVAAGFYHSLSVQAGGSL-WAWG 448
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 118/278 (42%), Gaps = 49/278 (17%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
++ V ++ GY +S A+ DG ++ G NS GQLG G AA+ P P V LS
Sbjct: 122 QRGVRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARSAPRP--VPGLSRAVA-- 177
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
A G ++A+ G V +WG G G+LG+G + TP + L+GV
Sbjct: 178 VAAGGSHALALCADGTVWAWGNNGYGQLGNGS---------TAHRATPVQVPGLQGVVA- 227
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG--------------- 286
A G++HS + +G V+ +G ++ H+ P + G
Sbjct: 228 -VAGGYMHSLALCADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLSQVVSVAAGGFHSL 286
Query: 287 -----GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 341
G ++ WG+N G LG P RV+G E V V+ G+ H+ A+ G
Sbjct: 287 ALCADGTVWAWGNNGFGQLGEAVSTQRTKPGRVEG-LRE--VVAVAGGFYHSLAVRAGGS 343
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
L W WG ++ GQLG+G+ P V
Sbjct: 344 L-WSWGNNY----------SGQLGNGSFSSSARPAPVQ 370
>gi|302847903|ref|XP_002955485.1| hypothetical protein VOLCADRAFT_119094 [Volvox carteri f.
nagariensis]
gi|300259327|gb|EFJ43556.1| hypothetical protein VOLCADRAFT_119094 [Volvox carteri f.
nagariensis]
Length = 1660
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 101/180 (56%), Gaps = 6/180 (3%)
Query: 38 RFAALWGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
R A +G GRLGLG L+S++ P + ++ +S+K +ACGGAHT +T+ G ++ G
Sbjct: 7 RVLATFGTAADGRLGLGFPLKSQFYPRIVASLAGYSIKQVACGGAHTAVVTDDGALFTFG 66
Query: 97 LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
LN +GQLG S + PL + GL VV ++ G +H+ A+T GE++ WG GQLG
Sbjct: 67 LNSWGQLGHSRQDKFVASPLEV-GLPDPVVAVAAGGYHTLALTSAGEVWCWGMAGEGQLG 125
Query: 157 LGKKAAKVI----PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+G+ + P V LSG A G S+A+T G++ SWG G G LGHG
Sbjct: 126 IGEPSEGATGGRQVEPRLVGSLSGAGVVSLAAGDHHSLALTRSGELFSWGRGDQGALGHG 185
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 99/261 (37%), Gaps = 71/261 (27%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
L +G ++G+LGLG P V L+G KQ A G + VT G + ++G
Sbjct: 9 LATFGTAADGRLGLGFPLKSQF-YPRIVASLAGYSIKQVACGGAHTAVVTDDGALFTFGL 67
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF- 262
G+LGH ++ F+ S E L V +AA G+ H+ + G V+ +
Sbjct: 68 NSWGQLGHSRQDK---FVASPLEVG------LPDPVVAVAAGGY-HTLALTSAGEVWCWG 117
Query: 263 -----------------GDRAVDKML-----------FQEGNHARRPSLISGGELYTWGS 294
G R V+ L G+H +L GEL++WG
Sbjct: 118 MAGEGQLGIGEPSEGATGGRQVEPRLVGSLSGAGVVSLAAGDHHSL-ALTRSGELFSWGR 176
Query: 295 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFS 354
+ G LG G++ + GP+S VD S G WG+G
Sbjct: 177 GDQGALGHGTVAI------TAGPYSSGAVD------------SRGNAYVWGYG------- 211
Query: 355 EDGHSSGGQLGHGNDVDYIHP 375
+G QLG G + + P
Sbjct: 212 -----TGYQLGTGRATNEMQP 227
>gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max]
Length = 1109
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 164/374 (43%), Gaps = 71/374 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + A +++ +ACG HT +T +G +Y G +
Sbjct: 334 WGEEAGGRLGHGVDSDVLHPKLIEALSNTNIELVACGEYHTCAVTLSGDLYTWGNGTYNC 393
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G + G LG G
Sbjct: 394 GLLGHGNQVSHWV-PKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHG 452
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ K + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 453 DR--KSVSLPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 510
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L R + V VK F AC
Sbjct: 511 GRLGHGDKEAKLVPTR------------VALVNVK---PNFCQVAC-------------- 541
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
H+ +L + G +YT GS G LGI D P V+ SES V+++
Sbjct: 542 ---------GHSLTVALTTKGHVYTMGSPVYGQLGIPQADG-KLPICVEWKLSESFVEEI 591
Query: 327 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 385
+CG H A + S ++ TWG G + G+LGHG+ D PT+V ++
Sbjct: 592 ACGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRNTPTLVEALKDKD 639
Query: 386 ALQVSCGFNHTGAL 399
++CG N T A+
Sbjct: 640 VKSIACGTNFTAAI 653
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 118/275 (42%), Gaps = 66/275 (24%)
Query: 142 GELYMWGKNS--------NGQLG--LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
G++++WG+ + N ++G LG K + P +E + + A G +
Sbjct: 267 GDVFIWGEGTGDGVLGGGNHRVGSCLGVKMDSLFP--KSLESAVVLDVQNIACGGRHAAL 324
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
VT G++ SWG GRLGHG +S +L P+LI+ L +++ A G H+
Sbjct: 325 VTKQGEIFSWGEEAGGRLGHGVDSDVLH---------PKLIEALSNTNIELVACGEYHTC 375
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC--LGIGSIDVLH 309
+ G+LYTWG+ C LG G+
Sbjct: 376 AV------------------------------TLSGDLYTWGNGTYNCGLLGHGNQVSHW 405
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
P+RV GP V +SCG HTA + S G++ T+G GTF G LGHG+
Sbjct: 406 VPKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFG----DGTF--------GALGHGD 453
Query: 369 DVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
P V + ++ ++ +CG HT A++E +
Sbjct: 454 RKSVSLPREVESLKGLRTVRAACGVWHTAAVVEVM 488
>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
Nc14]
Length = 554
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 149/362 (41%), Gaps = 55/362 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G YG L R P S + +ACG T FL ETG V+ G ND GQ
Sbjct: 16 FGQNSYGELCHNDTVDRTLPTPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYNDSGQ 75
Query: 103 LGISENIGYSLEPLRISGLKKEVVQI--STGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GI L + + +++ I + G H +AI+ G LY +G NS GQLG G
Sbjct: 76 CGIGSTSRVQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLGHG-- 133
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ I PTK++ L+ + A + ++ +T G + ++G G+LG
Sbjct: 134 STNPITTPTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDD------- 186
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ P + V L AC G H
Sbjct: 187 --GMDRHVPVPLTYFNSRPV-------LAVAC----------------------GQHHTV 215
Query: 281 PSLISGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
SL +GG + +G N++G LG G ++D SP + P V ++CG+ HT A++E
Sbjct: 216 VSLTNGG-VVAFGKNDHGQLGTGYTLDYHASPSLLAAPLDSLVVPSLACGYYHTIALAE- 273
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
HG+ G + GQLGHG+ PT++ A+QV+CG HT L
Sbjct: 274 ----------HGSVYSFGRNDYGQLGHGHRHHLSEPTLIKALAKTHAVQVTCGCYHTLVL 323
Query: 400 LE 401
E
Sbjct: 324 SE 325
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 13/213 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G D G+LG+ R PV + F + A+ACG HT+ G V A G ND GQ
Sbjct: 174 FGRNDLGQLGIDDGMDRHVPVPLTYFNSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQ 233
Query: 103 LGISENIGYSLEP-LRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + Y P L + L VV ++ GY+H+ A+ G +Y +G+N GQLG G +
Sbjct: 234 LGTGYTLDYHASPSLLAAPLDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGHGHR 293
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ PT ++ L+ Q G ++ ++ GKV +G G+LG G
Sbjct: 294 HH--LSEPTLIKALAKTHAVQVTCGCYHTLVLSEDGKVYPFGRNNHGQLGLGN------L 345
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
+ TS P++I L V A+GF HS C+
Sbjct: 346 IDCTS---PQIIASLRDKFVVKVASGFYHSICL 375
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 125/299 (41%), Gaps = 42/299 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G G+LG GS P + + +AC HT+ +T G +YA G ND GQ
Sbjct: 122 FGFNSRGQLGHGSTNPITTPTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQ 181
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LGI + + + P+ ++ + V+ ++ G HH+ +G + +GKN +GQLG G
Sbjct: 182 LGIDDGMDRHV-PVPLTYFNSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTL 240
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
L + A G+ ++A+ G V S+G G+LGHG +
Sbjct: 241 DYHASPSLLAAPLDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGHGHRHHL---- 296
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
SE P LIK L G H+ + E+G+VY F
Sbjct: 297 ---SE--PTLIKALAKTHAVQVTCGCYHTLVLSEDGKVYPF------------------- 332
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
G N +G LG+G++ SP+ + + V +V+ G+ H+ ++ K
Sbjct: 333 -----------GRNNHGQLGLGNLIDCTSPQII-ASLRDKFVVKVASGFYHSICLTATK 379
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 135/317 (42%), Gaps = 63/317 (19%)
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNS 151
Y+ G N +G+L ++ + +L P IS +++ ++ G ++ + G+++ G N
Sbjct: 14 YSFGQNSYGELCHNDTVDRTL-PTPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYND 72
Query: 152 NGQLGLGK--KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
+GQ G+G + + +P V I ++A G E A++ G + ++G G+L
Sbjct: 73 SGQCGIGSTSRVQSLRLVPALVT--EDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQL 130
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG + I TP IK+L V A + H+ + G
Sbjct: 131 GHGSTNPIT---------TPTKIKDLASYHVVEVACSYFHTIVMTMEG------------ 169
Query: 270 MLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 329
LY +G N+ G LGI H P + F+ PV V+CG
Sbjct: 170 ------------------TLYAFGRNDLGQLGIDDGMDRHVPVPLTY-FNSRPVLAVACG 210
Query: 330 WKHTA-AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 388
HT +++ G ++ +G ++ H GQLG G +DY H + + +L
Sbjct: 211 QHHTVVSLTNGGVVAFG---------KNDH---GQLGTGYTLDY-HASPSLLAAPLDSLV 257
Query: 389 V---SCGFNHTGALLEY 402
V +CG+ HT AL E+
Sbjct: 258 VPSLACGYYHTIALAEH 274
>gi|302810693|ref|XP_002987037.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
gi|300145202|gb|EFJ11880.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
Length = 228
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 115/232 (49%), Gaps = 14/232 (6%)
Query: 43 WGNGDYGRLGLGSLESRWR---PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG G++G+LGL + P + +ACG +HTL LT +G VY+ G
Sbjct: 4 WGCGEFGQLGLKDAAGVFTSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQGT 63
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG LG S + S +VQI+ G +HS A+TV+G+L+ WG+ GQLG G
Sbjct: 64 FGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCGS 123
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P+P V LS Q G + ++A+ G++ SWG G G+ GHG + +IL
Sbjct: 124 VENHLQPVP--VTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNIL- 180
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
P+L+ LE + A+AG H+ + G VY +GD ++L
Sbjct: 181 --------VPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQGQVL 224
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 108/259 (41%), Gaps = 56/259 (21%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVI--PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
L WG GQLGL K AA V P+P + + + A G ++A+TG G V S+
Sbjct: 1 LVSWGCGEFGQLGL-KDAAGVFTSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSF 59
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G G LGHG S +P ++ L G+ + A G HS
Sbjct: 60 GQGTFGALGHGTTESC---------SSPVIVDSLWGLGIVQIACGDNHSC---------- 100
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L G+L++WG + G LG GS++ P V S+
Sbjct: 101 --------------------ALTVEGQLFSWGRGKYGQLGCGSVENHLQPVPVT-ALSDR 139
Query: 322 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
+ QV CG +T AI S+G++ +WG H GQ GHG + + P +V
Sbjct: 140 LLTQVVCGADYTMAIDSDGQLFSWG------------HGHWGQTGHGTQDNILVPKLVCS 187
Query: 381 GENVKALQVSCGFNHTGAL 399
EN +Q S G H AL
Sbjct: 188 LENDNIVQASAGARHAVAL 206
>gi|449280347|gb|EMC87674.1| RCC1 and BTB domain-containing protein 2, partial [Columba livia]
Length = 531
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 138/302 (45%), Gaps = 47/302 (15%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-S 106
G LG G ++S P + + L+ G G H + TE G VY G N + QLG +
Sbjct: 57 GCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGT 116
Query: 107 ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N G+ + + + K+V++++ G HHS +T DGE+Y WG N++GQ+G G A + P
Sbjct: 117 TNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ--P 174
Query: 167 IPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
IP +V CL A G S+AV G+V WG G+G+LG G S +
Sbjct: 175 IPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGS---------SGN 225
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
+ TP I L+G++V+ A G+ H+ + + G++
Sbjct: 226 QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQI-------------------------- 259
Query: 286 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILT 343
Y WG+N G LG G+ P V + ++ +C HT+A G++
Sbjct: 260 ----YAWGANSYGQLGTGNKSNQSYPTTVVVD-KDRVIEIAACHSAHTSAAKTQSGQVYM 314
Query: 344 WG 345
WG
Sbjct: 315 WG 316
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 117/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ + P V + + +ACG H++ LT G VY G N+ G
Sbjct: 104 WGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSG 163
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++ K VV I+ G S A+ +GE+Y+WG N NGQLGLG
Sbjct: 164 QVGSGSTANQPI-PRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGS 222
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P ++ L GI ++ A G+ ++ +T G++ +WGA G+LG G
Sbjct: 223 SGNQ--PTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGN------ 274
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y ++ + + V ++IAA H SA ++G+VY++G
Sbjct: 275 --KSNQSYPTTVVVDKDRV-IEIAACHSAHTSAAKTQSGQVYMWG 316
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 144/348 (41%), Gaps = 62/348 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ TE V+ G+N G LG + + ++E
Sbjct: 11 KWPIFSLCSQEELKLIRQACVFGSAGNEVLYATENDEVFVLGMNCSGCLGTGD-MQSTIE 69
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE+Y WG N+ QLG G +P
Sbjct: 70 PRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTN 129
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
L + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 130 -LVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGS---------TANQPIPRRV 179
Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYT 291
K+ + A G + S + ENG VY+
Sbjct: 180 TSCLQNKIVVNIACGQMCSMAVVENGEVYV------------------------------ 209
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSH 350
WG N NG LG+GS +P R+ V +V+CG+ HT ++ EG+I WG
Sbjct: 210 WGYNGNGQLGLGSSGNQPTPCRI-AALQGIRVQRVACGYAHTLVLTDEGQIYAWG----- 263
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 264 -------ANSYGQLGTGNKSNQSYPTTVVVDKDRVIEIAACHSAHTSA 304
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 209 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 268
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K V++I+ + H S+A T G++YMWG+ GQ
Sbjct: 269 QLGTGNKSNQSY-PTTVVVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ----- 321
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 322 --SVILPHLTHFACTDDVF 338
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 111/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
T + E+++ G N +G LG G + + P +++ L G K A L + V T
Sbjct: 43 TENDEVFVLGMNCSGCLGTGDMQSTIEP--RRLDSLCG--KKIACLSYGSGPHVVLATEE 98
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + GF+ + + L+ + KV A G HS
Sbjct: 99 GEVYTWGHNAYSQLGNGTTNH--GFV--PCQVSTNLVNK----KVIEVACGSHHSM---- 146
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE+YTWG N +G +G GS P RV
Sbjct: 147 --------------------------VLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVT 180
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
V ++CG + A+ E G++ WG+ G+ GQLG G+ +
Sbjct: 181 SCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGN------------GQLGLGSSGNQPT 228
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P + + ++ +V+CG+ HT L +
Sbjct: 229 PCRIAALQGIRVQRVACGYAHTLVLTD 255
>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
anatinus]
Length = 3053
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 138/301 (45%), Gaps = 46/301 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y+ G +G+
Sbjct: 2282 WGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGR 2341
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 2342 LGHGDSED-QLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 2399
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 2400 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 2456
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 2457 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 2487
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ +++V+CG HT A S
Sbjct: 2488 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACGSAHTLAWSTS 2538
Query: 340 K 340
K
Sbjct: 2539 K 2539
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 167/386 (43%), Gaps = 57/386 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P C A L GG TLF +T G +YATG G
Sbjct: 2176 WGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL-IGGEQTLFAVTADGKLYATGYGAGG 2234
Query: 102 QLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 2235 RLGIGGTESVSTPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 2292
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G ++ P VE L GI A G S +T G + SWG G GRLGHG
Sbjct: 2293 GNRSP--CDRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGHGD---- 2346
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 2347 -----SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 2401
Query: 276 NHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + P +L G +YTWG + LG GS D + P +
Sbjct: 2402 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 2461
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 2462 VQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNAI 2508
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 2509 QRPRLVAALQGKKINRVACGSAHTLA 2534
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 116/247 (46%), Gaps = 41/247 (16%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG V++ G D G+LG + + EP IS L K VV I+ G +
Sbjct: 209 GHHYLALAATGEVFSWGCGDGGRLGHGDTVPLE-EPKMISALSGKQAGKHVVHIACGSTY 267
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ + G Q++AV
Sbjct: 268 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 325
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + + G S
Sbjct: 326 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 376
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 377 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVH 436
Query: 291 TWGSNEN 297
+WGSN+
Sbjct: 437 SWGSNDQ 443
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + SA KH + +ACG ++ +T G +Y G
Sbjct: 224 WGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 282
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ +S +G + A+T +G+++ WG G+
Sbjct: 283 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 341
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 342 LGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 399
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 400 EHV---------RYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWG 439
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 132/285 (46%), Gaps = 46/285 (16%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 1189 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRH 1248
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 1249 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 1306
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G++ +WG G GRLGHG +T++ P+++K L G +V + AC
Sbjct: 1307 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRV-------IQVACGS 1350
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
+ + D G +++WG + G LG G + + P+ +
Sbjct: 1351 RDAQTLALTDE---------------------GLVFSWGDGDFGKLGRGGSEGCNVPQNI 1389
Query: 315 QGPFSESPVDQVSCGWKHTAAISEGKILTWGWG-GSHGTFSEDGH 358
+ + V Q+ CG + + A+++ ++ W WG G G D H
Sbjct: 1390 ER-LNGQGVCQIECGAQFSLALTKSGVV-WTWGRGDFGELRPDSH 1432
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 151/353 (42%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ +G P + GL
Sbjct: 147 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYVQAYN-------SDTLG----PQLVQGL 195
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+++ + HH A+ GE++ WG G+LG G +P+ P + LSG
Sbjct: 196 ASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHG----DTVPLEEPKMISALSG 251
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S + P
Sbjct: 252 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 299
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV + G GD A+ ++ G++
Sbjct: 300 MLVTGLKGLKVIDVSCG---------------SGD-------------AQTLAVTENGQV 331
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + + +V CG + + A++ +G++ +WG G
Sbjct: 332 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDIVKVRCGSQFSIALTKDGQVYSWGKGD 390
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 391 NQ------------RLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTE 431
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 157/370 (42%), Gaps = 50/370 (13%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H + LT G V++ G D
Sbjct: 1207 GEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 1266
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 1267 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 1325
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 1326 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 1379
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLF 272
S P+ I+ L G V G S + ++G V+ FG+ D +
Sbjct: 1380 -----SEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGRGDFGELRPDSHIV 1434
Query: 273 QEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPER----VQGPFSESPVDQVSC 328
Q GN + R + N+ CL L SP + G S + C
Sbjct: 1435 QSGNVSDRMRV----------RNKGACLIPLPFFGLVSPREMGWEIVGIERNSGISSF-C 1483
Query: 329 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 388
G + + ++ WG ++ H GQ G+G PT+V E K +
Sbjct: 1484 GQQGERRERQLEVYAWG---------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITR 1531
Query: 389 VSCGFNHTGA 398
V+CG +H+ A
Sbjct: 1532 VACGSSHSVA 1541
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 159/339 (46%), Gaps = 27/339 (7%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR 61
L R +TA++ Y +K K+ G + ++ T+ + + WG GD G+LG S + +
Sbjct: 1225 LPRQITALSNYVVK---KVAVHSG-GRHAMALTVDGKVFS-WGEGDDGKLGHFSRMNCDK 1279
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P + A + ++ +ACG +H+ +T +G +Y GL ++G+LG +N L+P + L
Sbjct: 1280 PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNT-TQLKPKMVKVL 1338
Query: 122 K-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
V+Q++ G + A+T +G ++ WG G+LG G ++ +P +E L+G
Sbjct: 1339 LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNVPQNIERLNGQG 1396
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
Q G + S+A+T G V +WG G G L +S I+ + + R+ +G
Sbjct: 1397 VCQIECGAQFSLALTKSGVVWTWGRGDFGEL--RPDSHIV----QSGNVSDRMRVRNKG- 1449
Query: 239 KVKIAAAGFLHSACIDENG--RVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNE 296
+ F E G V I + + Q+G R E+Y WG N+
Sbjct: 1450 -ACLIPLPFFGLVSPREMGWEIVGIERNSGISSFCGQQGERRERQL-----EVYAWGDND 1503
Query: 297 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
+G G G+ V P VQG + +V+CG H+ A
Sbjct: 1504 HGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 1541
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 114/258 (44%), Gaps = 52/258 (20%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 1143 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 1200
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 1201 GKVYACGEATNGRLGLGISSGTVPL--------PRQITALSNYVVKKVA---VHSG---- 1245
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 1246 -------------------GRHAM--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 1284
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AAI S G++ TWG G G+LGHG++ +
Sbjct: 1285 A-LKTKRIRDIACGSSHSAAITSSGELYTWGLG------------EYGRLGHGDNTTQLK 1331
Query: 375 PTIVNFGENVKALQVSCG 392
P +V + +QV+CG
Sbjct: 1332 PKMVKVLLGHRVIQVACG 1349
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 126/332 (37%), Gaps = 101/332 (30%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 2171 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 2229
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 2230 YGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 2289
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+++ L G++V AAG HSACI G +Y +G
Sbjct: 2290 LGHGNRSPC---------DRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYG 2340
Query: 269 KMLFQEGNHARRPSLISGGE------------------------LYTWGSNENGCLGIGS 304
++ + +P L+ + +++WG + G LG G
Sbjct: 2341 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 2400
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 363
D P ++ + V +V CG + + A+++ G + TWG G H +
Sbjct: 2401 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 2447
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
LGHG+D P V + K + ++ G H
Sbjct: 2448 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 2479
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 33/217 (15%)
Query: 194 GGGKVLSWGAGGSGRLG--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
G G + WG G+LG G + + + + P + E + A G L++
Sbjct: 2169 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 2228
Query: 252 CIDENGRVYIFGDRAVDKMLFQE---------------GNHARRPSLISGGELYTWGSNE 296
GR+ I G +V E G H +L S GE+Y+WG E
Sbjct: 2229 GYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCL--ALSSEGEVYSWGEAE 2286
Query: 297 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSE 355
+G LG G+ P V+ VD ++ G H+A I+ G + +WG G
Sbjct: 2287 DGKLGHGNRSPCDRPRVVESLRGIEVVD-IAAGGAHSACITVAGDLYSWGKG-------- 2337
Query: 356 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
G+LGHG+ D + P +V + + + ++CG
Sbjct: 2338 ----RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACG 2370
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
WG GD RLG G+ E P + + + +A G H L LTE V++ G ND
Sbjct: 386 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQCQ 445
Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
F L I++ +P + GL K +V I+ G S A
Sbjct: 446 HFDTLRITKP-----QPSALPGLDTKHIVGIACGPAQSFA 480
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 17/117 (14%)
Query: 287 GELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSC--GWKHTAAIS-EGKIL 342
G++Y G NG LG+G S + P ++ S V +V+ G +H A++ +GK+
Sbjct: 1201 GKVYACGEATNGRLGLGISSGTVPLPRQITA-LSNYVVKKVAVHSGGRHAMALTVDGKVF 1259
Query: 343 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+WG G G+LGH + ++ P ++ + + ++CG +H+ A+
Sbjct: 1260 SWGEGDD------------GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 1304
>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
Length = 1048
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 151/334 (45%), Gaps = 40/334 (11%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G LGLG +E + P + + ++ +ACG +T+ +T G VY+ G ND+
Sbjct: 4 WGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGNNDY 63
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E L+ I GL V +I+ G H+ A+ G+L+ WG N GQLGL
Sbjct: 64 GQLG-HEKARKRLQ--LIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQLGLNS 120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P V+ L Q A G E S+A+T G++ SWG+ G+LG G
Sbjct: 121 VDCTE-RTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNREGQLGIGS------ 173
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +E P+ I L V + A G H+ I ++G V+ +G ++ +
Sbjct: 174 --HTVTEIKPKRIITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLGLNDTQQRI 231
Query: 280 RPS----------------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
P L G ++T G+ G LG G+ P +V
Sbjct: 232 VPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGNGMNEILPRQVM-E 290
Query: 318 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 349
S V Q+SCG +HT A+ S G++ WG GG+
Sbjct: 291 LMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGA 324
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 126/299 (42%), Gaps = 65/299 (21%)
Query: 101 GQLGI----SENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LG+ ENI P ++ K EV QI+ G +++ IT DG++Y G N GQL
Sbjct: 10 GELGLGGIEDENI---FMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGNNDYGQL 66
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G K ++ IP L K+ A G ++AV G++ SWG G+LG
Sbjct: 67 GHEKARKRLQLIPG----LDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQLGLNS-- 120
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+E TPR++K L + A G HS
Sbjct: 121 ------VDCTERTPRMVKALGTSVIVQIACGIEHSI------------------------ 150
Query: 276 NHARRPSLISGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTA 334
+L + GELY+WGSN G LGIGS V P+R+ + P+ ++CG HT
Sbjct: 151 ------ALTNDGELYSWGSNREGQLGIGSHTVTEIKPKRIIT-LAAVPIAFIACGGYHTV 203
Query: 335 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
IS+ G + WG TF GQLG + I P + N K +CG
Sbjct: 204 VISKSGVVFAWG----RNTF--------GQLGLNDTQQRIVPCQLRTLRNAKVCYAACG 250
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 106/255 (41%), Gaps = 55/255 (21%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++ WG +G+LGLG + I +P +V+ +Q A G +V +T G+V S G
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGN 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH + L +LI L+ K A G H+ ++E
Sbjct: 61 NDYGQLGHEKARKRL-----------QLIPGLDAFVFKKIACGSCHTLAVNE-------- 101
Query: 264 DRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
G+L++WG N G LG+ S+D R+ S +
Sbjct: 102 ----------------------WGQLFSWGCNMKGQLGLNSVDCTERTPRMVKALGTSVI 139
Query: 324 DQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHG-NDVDYIHPTIVNFG 381
Q++CG +H+ A++ +G++ +W G + GQLG G + V I P +
Sbjct: 140 VQIACGIEHSIALTNDGELYSW------------GSNREGQLGIGSHTVTEIKPKRIITL 187
Query: 382 ENVKALQVSCGFNHT 396
V ++CG HT
Sbjct: 188 AAVPIAFIACGGYHT 202
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 54/126 (42%), Gaps = 1/126 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL + R P + ACG ++FLT G V+ G +GQ
Sbjct: 214 WGRNTFGQLGLNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
LG + L + + V QIS G H+ A+ G +Y WG GQLG
Sbjct: 274 LGHGNGMNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASR 333
Query: 162 AKVIPI 167
+ P+
Sbjct: 334 SATTPL 339
>gi|115374127|ref|ZP_01461415.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115368903|gb|EAU67850.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 479
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 132/289 (45%), Gaps = 39/289 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN YG+LG GS R PV + + A+A G H+L L G V+A G ND+GQ
Sbjct: 194 WGNNGYGQLGNGSTAHRATPVQVPGLQ--GVVAVAGGYMHSLALCADGTVWAWGFNDYGQ 251
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + +S P+ + GL +VV ++ G HS A+ DG ++ WG N GQLG
Sbjct: 252 LGNGTTV-HSPTPVPVPGL-SQVVSVAAGGFHSLALCADGTVWAWGNNGFGQLGEAVSTQ 309
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P +VE L + A GF S+AV GG + SWG SG+LG+G S
Sbjct: 310 RT--KPGRVEGLREVVA--VAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFS------- 358
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP- 281
S P ++ L V AAG +HS + +G V+ +G ++ + P
Sbjct: 359 --SSARPAPVQGLG--AVTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPERATPV 414
Query: 282 -------------------SLISGGELYTWGSNENGCLGIGSIDVLHSP 311
S+ +GG L+ WG N+ G LG ++ P
Sbjct: 415 RVPGLQGEVAVAAGFYHSLSVQAGGSLWAWGLNDFGQLGDSEAPLMPVP 463
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 148/324 (45%), Gaps = 43/324 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG G+ +R P + A+A GG+H L L G V+A G N +GQL
Sbjct: 145 GSNSAGQLGNGTTAARSAPRPVPGLSR--AVAVAAGGSHALALCADGTVWAWGNNGYGQL 202
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
G + + + P+++ GL+ VV ++ GY HS A+ DG ++ WG N GQLG G
Sbjct: 203 G-NGSTAHRATPVQVPGLQG-VVAVAGGYMHSLALCADGTVWAWGFNDYGQLGNGTTVHS 260
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
P+P V LS + + AA GF S+A+ G V +WG G G+LG S
Sbjct: 261 PTPVP--VPGLSQVVSV-AAGGFH-SLALCADGTVWAWGNNGFGQLGEAV---------S 307
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
T P ++ L +V A GF HS + G ++ +G+ ++ + + RP+
Sbjct: 308 TQRTKPGRVEGLR--EVVAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARPAP 365
Query: 284 ISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
+ G G ++ WG NE G LG +P RV G E
Sbjct: 366 VQGLGAVTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPERATPVRVPGLQGEV-- 423
Query: 324 DQVSCGWKHTAAISEGKILTWGWG 347
V+ G+ H+ ++ G L W WG
Sbjct: 424 -AVAAGFYHSLSVQAGGSL-WAWG 445
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 118/278 (42%), Gaps = 49/278 (17%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
++ V ++ GY +S A+ DG ++ G NS GQLG G AA+ P P V LS
Sbjct: 119 QRGVRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARSAPRP--VPGLSRAVA-- 174
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
A G ++A+ G V +WG G G+LG+G + TP + L+GV
Sbjct: 175 VAAGGSHALALCADGTVWAWGNNGYGQLGNGS---------TAHRATPVQVPGLQGVVA- 224
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG--------------- 286
A G++HS + +G V+ +G ++ H+ P + G
Sbjct: 225 -VAGGYMHSLALCADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLSQVVSVAAGGFHSL 283
Query: 287 -----GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 341
G ++ WG+N G LG P RV+G E V V+ G+ H+ A+ G
Sbjct: 284 ALCADGTVWAWGNNGFGQLGEAVSTQRTKPGRVEG-LRE--VVAVAGGFYHSLAVRAGGS 340
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
L W WG ++ GQLG+G+ P V
Sbjct: 341 L-WSWGNNY----------SGQLGNGSFSSSARPAPVQ 367
>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
magnipapillata]
Length = 725
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 129/275 (46%), Gaps = 61/275 (22%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ D+G+LGLG +S +P + ++ +ACG HT+ +E+G +++ G N+ G
Sbjct: 61 VFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRKVACGRNHTIVYSESGKLFSFGCNEDG 120
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG + L P I + + E+ QI+ G +HS ++ DG++Y+WG N+ GQLGLG++
Sbjct: 121 QLGHVDKEN-ELLPKEIESIPQMEIKQIACGTYHSIILSEDGDVYVWGNNNEGQLGLGEE 179
Query: 161 AAKVIPIPTK-------VEC-------------------------------LSGIFTKQA 182
+P K V C LS Q+
Sbjct: 180 VENSLPKKLKFKKEVVSVSCGYYHTALVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQS 239
Query: 183 -------------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
+ G +VA+T G +WG G G+LGHG + L +E P
Sbjct: 240 VAMPADNDEYISVSCGARHTVAITKQGHCYAWGDGSQGQLGHGTK------LLEVNE--P 291
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
+ IK+L G K + G H+A + E+G+V+ FGD
Sbjct: 292 KQIKKLSGQKCISVSCGESHTAVVTESGKVFTFGD 326
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 140/301 (46%), Gaps = 47/301 (15%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
VV+++ G HS+ +T G LY++G N GQLGLG K + P+ V+ L ++ A
Sbjct: 40 VVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLG--HTKSLNKPSFVKPLKPEKVRKVAC 97
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G ++ + GK+ S+G G+LGH + +E P+ I+ + +++K A
Sbjct: 98 GRNHTIVYSESGKLFSFGCNEDGQLGH---------VDKENELLPKEIESIPQMEIKQIA 148
Query: 245 AGFLHSACIDENGRVYIFGD---------RAVDKMLFQEGNHARRPSLIS---------- 285
G HS + E+G VY++G+ V+ L ++ + +S
Sbjct: 149 CGTYHSIILSEDGDVYVWGNNNEGQLGLGEEVENSLPKKLKFKKEVVSVSCGYYHTALVT 208
Query: 286 -GGELYTWGSNENGCLGIGSIDVLHS--PERVQGPFSESPVDQVSCGWKHTAAIS-EGKI 341
G LYT+G NE G LG+ S + ++ P+ V P VSCG +HT AI+ +G
Sbjct: 209 RDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQGHC 268
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGND-VDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
WG G S GQLGHG ++ P + K + VSCG +HT +
Sbjct: 269 YAWGDG------------SQGQLGHGTKLLEVNEPKQIKKLSGQKCISVSCGESHTAVVT 316
Query: 401 E 401
E
Sbjct: 317 E 317
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 166/353 (47%), Gaps = 55/353 (15%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHH 134
+ACG H+ +TE+G +Y G ND+GQLG+ + +P + LK E V +++ G +H
Sbjct: 43 MACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLN-KPSFVKPLKPEKVRKVACGRNH 101
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ + G+L+ +G N +GQLG K +++P ++E + + KQ A G S+ ++
Sbjct: 102 TIVYSESGKLFSFGCNEDGQLGHVDKENELLP--KEIESIPQMEIKQIACGTYHSIILSE 159
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACI 253
G V WG G+LG G+E P+ +K + E V V + G+ H+A +
Sbjct: 160 DGDVYVWGNNNEGQLGLGEE---------VENSLPKKLKFKKEVVSV---SCGYYHTALV 207
Query: 254 DENGRVYIFGDRAVDKM-----------------LFQEGNH-------ARRPSLISG-GE 288
+G +Y FG+ + K+ + + + AR I+ G
Sbjct: 208 TRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQGH 267
Query: 289 LYTWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGW 346
Y WG G LG G+ + ++ P++++ S VSCG HTA ++E GK+ T+G
Sbjct: 268 CYAWGDGSQGQLGHGTKLLEVNEPKQIK-KLSGQKCISVSCGESHTAVVTESGKVFTFG- 325
Query: 347 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G HG + G+ N D ++ + N+ + VSCG HT L
Sbjct: 326 DGRHGKLGQ------GEDSFSNSFDPVYLSRFNY---FNVVYVSCGGCHTLVL 369
>gi|328709531|ref|XP_003243987.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Acyrthosiphon pisum]
Length = 505
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 166/362 (45%), Gaps = 71/362 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G +G+LGLG E+ ++P + + +K +ACG +HT+ TE VY G N GQ
Sbjct: 58 FGKNSFGQLGLGHTENVYKPNCVKSLKPDKVKHIACGRSHTIVSTENNIVYGFGDNSDGQ 117
Query: 103 LGIS-ENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG-- 158
LG S ++ +S P+ ++ K ++Q+S G +H++A+ +G++Y+WG NS+ QLGL
Sbjct: 118 LGQSVADVTHSDVPIEVTRFNDKNIIQLSAGSYHTAALLENGDVYVWGSNSDRQLGLNSM 177
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ + +PT V + + G + VT G + + G G+LGHG S
Sbjct: 178 DDDSVNVSVPTIVPIALPVL--YVSCGHTHTAFVTRIGDLYTCGDREYGKLGHGLWS--- 232
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S + T +++K + G H+ +++ G+V++ G+ ++ +
Sbjct: 233 ---LSRVDTTEKIVK---------VSCGANHTIALNDAGKVFVCGNNDCGQIGLR----- 275
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS- 337
++ S G LY P + P+ Q+ CG H+A I+
Sbjct: 276 ---NVTSQGHLYPC------------------------PITNEPIVQIVCGQSHSAFITA 308
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI-HPTIV--NFGENVKALQVSCGFN 394
GK+ G G G+LG DV+ I PT+V +N+ VSCG N
Sbjct: 309 SGKLFMCGDGKY------------GKLGI--DVNQITTPTLVLAFVDKNLNVQMVSCGGN 354
Query: 395 HT 396
HT
Sbjct: 355 HT 356
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 139/341 (40%), Gaps = 68/341 (19%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
+ ETG V+ +G+ ++NI P V++IS G HS + +G ++
Sbjct: 7 IPETGAVFT-----YGKSSFADNI-----PSHFFIRNDPVIEISCGEEHSGIVCKNGRVF 56
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
+GKNS GQLGLG + + P V+ L K A G ++ T V +G
Sbjct: 57 CFGKNSFGQLGLGH--TENVYKPNCVKSLKPDKVKHIACGRSHTIVSTENNIVYGFGDNS 114
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-- 263
G+LG T P + + +AG H+A + ENG VY++G
Sbjct: 115 DGQLGQ-------SVADVTHSDVPIEVTRFNDKNIIQLSAGSYHTAALLENGDVYVWGSN 167
Query: 264 -----------DRAVD-----------KMLFQEGNHARRPSLISGGELYTWGSNENGCLG 301
D +V+ +L+ H + G+LYT G E G LG
Sbjct: 168 SDRQLGLNSMDDDSVNVSVPTIVPIALPVLYVSCGHTHTAFVTRIGDLYTCGDREYGKLG 227
Query: 302 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSS 360
G L S RV + + +VSCG HT A+++ GK+ G++
Sbjct: 228 HG----LWSLSRVD---TTEKIVKVSCGANHTIALNDAGKVFVC------------GNND 268
Query: 361 GGQLGHGNDVD--YIHPTIVNFGENVKALQVSCGFNHTGAL 399
GQ+G N +++P + N +Q+ CG +H+ +
Sbjct: 269 CGQIGLRNVTSQGHLYPCPIT---NEPIVQIVCGQSHSAFI 306
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 16/119 (13%)
Query: 286 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 345
G ++ +G N G LG+G + ++ P V+ V ++CG HT +E I+ +G
Sbjct: 52 NGRVFCFGKNSFGQLGLGHTENVYKPNCVKS-LKPDKVKHIACGRSHTIVSTENNIV-YG 109
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIH---PTIVNFGENVKALQVSCGFNHTGALLE 401
+G + S GQLG D H P V + +Q+S G HT ALLE
Sbjct: 110 FGDN----------SDGQLGQSV-ADVTHSDVPIEVTRFNDKNIIQLSAGSYHTAALLE 157
>gi|149044295|gb|EDL97616.1| rCG42876 [Rattus norvegicus]
Length = 637
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 134/263 (50%), Gaps = 30/263 (11%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K D+ + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDVPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE--------NIGYSLEPLRISGL 121
+K ACG HTL T+TG VYA G N+ GQLG+ + IG+ P I
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGF-FTPSDI--- 179
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+ Q+S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G
Sbjct: 180 ---IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIP----HEVTVGKPISW 232
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
+ G+ S VT V ++G G G+LG G FL TSE P++I ++ K+
Sbjct: 233 ISCGYYHSAFVT-KKVVYAFGLGQFGQLGLGT------FLFETSE--PKIIDRIKDQKIS 283
Query: 242 IAAAGFLHSACIDENGRVYIFGD 264
+ G H+A + + G +Y FGD
Sbjct: 284 HISCGENHTALMTDIGLMYTFGD 306
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 147/357 (41%), Gaps = 70/357 (19%)
Query: 50 RLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTL--FLTETGCVYATGLNDFGQLGI 105
R G G L RP V + F K + A G + +TG V+ FG+
Sbjct: 6 RWGTGGLGQYLRPNRVAPAVFPKQAQIPFAAFGMAEPESLVPDTGAVFT-----FGKTKF 60
Query: 106 SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ENI P + + +S G H++ +T + +LYM+G N+ GQLGLG K+A I
Sbjct: 61 AENI-----PSKFWFKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSA--I 113
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
PT ++ L K AA G ++ T G V + G G+LG G F
Sbjct: 114 SKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTF-HQIG 172
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
+TP I +K +AG SA + E+G+
Sbjct: 173 FFTPSDI-------IKQLSAGANTSAALTEDGK--------------------------- 198
Query: 286 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 345
L+ WG N G +G+ + + P V P+ +SCG+ H+A +++ + +G
Sbjct: 199 ---LFMWGDNSEGQIGLKNKSNVCIPHEVT---VGKPISWISCGYYHSAFVTKKVVYAFG 252
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G GQLG G + + P I++ ++ K +SCG NHT + +
Sbjct: 253 LG------------QFGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENHTALMTD 297
>gi|328704352|ref|XP_003242465.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Acyrthosiphon pisum]
Length = 893
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 172/372 (46%), Gaps = 53/372 (14%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLESRW--RPVVCSAFEK-HSLKALACGGAHTLFLTETGC 91
+R WGN G LGLG +E + P FE +++K++ACG HTL +TE G
Sbjct: 15 FRRLTMYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQ 74
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKN 150
+YA G NDFGQLG + G + +I G++ V+ ++ G HS A+ G+LY WG +
Sbjct: 75 LYACGSNDFGQLG---HDGCRTKLQKIPGVESLVMTSVACGEAHSMALNEWGQLYTWGSD 131
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
S GQLGL + P V+ L+ + Q + G++ +A+T G++ +WG+
Sbjct: 132 SCGQLGLETDEG-IQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGS------- 183
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
+ + L + P L+ L G+ + A G HS + ++G V+ +G ++
Sbjct: 184 -NEFGQLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQL 242
Query: 271 LFQEGNHARRPS-----------LISGGE-----------LYTWGSNENGCLGIGSIDVL 308
P+ I+GGE ++T G+ G LG GS
Sbjct: 243 GINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNE 302
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGH 366
P +V S V QV+CG +HT + S+G++ ++G G S GQLG
Sbjct: 303 IVPRKVL-ELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLG------------SVGQLGT 349
Query: 367 GNDVDYIHPTIV 378
+ ++ P +V
Sbjct: 350 KSSINSNTPQLV 361
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 123/247 (49%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ G+LGL + E +++P + L ++CG H + LT G +Y G N+FG
Sbjct: 128 WGSDSCGQLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGSNEFG 187
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ G +P ++ L + I+ G +HS ++ G ++ WGKN GQLG+ +
Sbjct: 188 QLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQ 247
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ + P +++ + + K A G + SV +T G V + GAG G+LGHG S+
Sbjct: 248 TS--LSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSN---- 301
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
E PR + EL G V G H+ + GRVY FG +V ++ + ++
Sbjct: 302 -----EIVPRKVLELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLGSVGQLGTKSSINSN 356
Query: 280 RPSLISG 286
P L+ G
Sbjct: 357 TPQLVLG 363
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 83/209 (39%), Gaps = 69/209 (33%)
Query: 201 WGAGGSGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENG 257
WG +G LG G +E+ IL +P I E V +K A G H+ + E+G
Sbjct: 23 WGNTINGELGLGGIEENYIL---------SPEEIVNFESVNNIKSVACGNNHTLAVTEDG 73
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG- 316
+LY GSN+ G LG H R +
Sbjct: 74 ------------------------------QLYACGSNDFGQLG-------HDGCRTKLQ 96
Query: 317 --PFSESPV-DQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND--V 370
P ES V V+CG H+ A++E G++ TWG S GQLG D +
Sbjct: 97 KIPGVESLVMTSVACGEAHSMALNEWGQLYTWG------------SDSCGQLGLETDEGI 144
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHTGAL 399
Y P IV ++ +Q+SCG+ H AL
Sbjct: 145 QY-KPKIVKTLASMLLVQISCGYKHCMAL 172
>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
Length = 786
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 136/302 (45%), Gaps = 48/302 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ S RP + + +ACGG H+ +T G +Y G +G+
Sbjct: 38 WGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGR 97
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L+ +V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 98 LGHGDS-DDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG- 155
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 156 -GSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHV-- 212
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHA 278
PR + L+G K+ A G LH AC D+
Sbjct: 213 -------RRPRKVAALQGKKIISIATGSLHCVACSDK----------------------- 242
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
GE++TWG N+ G LG G+ LH P V + +V+CG HT A S
Sbjct: 243 --------GEVFTWGDNDEGQLGDGTTSALHRPRLVHA-LQGKKITRVACGSAHTLAWST 293
Query: 339 GK 340
K
Sbjct: 294 AK 295
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 136/311 (43%), Gaps = 51/311 (16%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
LE ++ +KK V +S+G H A++ +G +Y WG+ +G+LG G K + P +E
Sbjct: 6 LESIQHVFIKK--VAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVS--YDRPKLIE 61
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
L G+ A G S A+T G + +WG G GRLGHG S + P+++
Sbjct: 62 DLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---------SDDQLRPKVV 112
Query: 233 KELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP--------- 281
+ L+ KV A +G + C+ ++ V+ +GD K+ + + P
Sbjct: 113 EALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGL 172
Query: 282 -------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 328
+L G +YTWG + LG G+ D + P +V + ++
Sbjct: 173 GVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAA-LQGKKIISIAT 231
Query: 329 GWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 387
G H A S+ G++ TW G + GQLG G P +V+ + K
Sbjct: 232 GSLHCVACSDKGEVFTW------------GDNDEGQLGDGTTSALHRPRLVHALQGKKIT 279
Query: 388 QVSCGFNHTGA 398
+V+CG HT A
Sbjct: 280 RVACGSAHTLA 290
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 13/75 (17%)
Query: 326 VSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 384
VS G KH A+S EG + +WG G G+LGHGN V Y P ++ V
Sbjct: 19 VSSGGKHCIALSSEGHVYSWGEGDD------------GKLGHGNKVSYDRPKLIEDLLGV 66
Query: 385 KALQVSCGFNHTGAL 399
+ + ++CG +H+ A+
Sbjct: 67 EIVDIACGGHHSAAI 81
>gi|224134180|ref|XP_002321756.1| predicted protein [Populus trichocarpa]
gi|222868752|gb|EEF05883.1| predicted protein [Populus trichocarpa]
Length = 390
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 169/381 (44%), Gaps = 46/381 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSA---FEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG G G+LG G LE + P + S+ LACGGAH + LT G V+ G
Sbjct: 19 WGAGTEGQLGTGKLEDEYLPQLLHLPFLSSAESISTLACGGAHVIALTSGGRVFTWGRGT 78
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLG E + SL P +S L+ V+ +S G+ HS ++ G L+ G S GQLG G
Sbjct: 79 TGQLGHGEMLN-SLHPKPVSSLQSCVITHVSAGWSHSGFVSDIGLLFTCGDGSFGQLGQG 137
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P+ KV+ + F Q A G S+ + G +V +G+G G+LG ++
Sbjct: 138 NYRSQSTPV--KVDYFANNFVNQIACGMRHSLVLLNGNQVYGFGSGKRGQLGISRD---- 191
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD---RAVDKMLFQEG 275
++ S P++ LE V++ +A HSA I +G +Y +G A D Q
Sbjct: 192 ---KTKSINLPQVTCGLEDVQIVSISANGDHSAAISADGHLYTWGRGFAGASDANFPQLS 248
Query: 276 NHARRPS----------LISGG-ELYTWGSNENGCL-GIGSID-VLHSPERVQGPFSESP 322
+ R + L++G E+ G N +G L + + V H PE G
Sbjct: 249 LSSLRCTKAALGWNHGLLLTGDEEVLMLGGNYHGVLCDLEKMSAVKHRPEDSPGTALNEV 308
Query: 323 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 382
+ AA +E LTWGWG GQLG GN D P V+
Sbjct: 309 IGLDGVKVVKIAAGAEHSALTWGWG------------EHGQLGLGNTNDQTIPQTVSLIP 356
Query: 383 NVK----ALQVSCGFNHTGAL 399
+++ +L V CG T A+
Sbjct: 357 DIQNKEASLNVYCGSGFTFAI 377
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 40/233 (17%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSW 201
+++ WG + GQLG GK + +P + LS + A G +A+T GG+V +W
Sbjct: 15 QIWSWGAGTEGQLGTGKLEDEYLPQLLHLPFLSSAESISTLACGGAHVIALTSGGRVFTW 74
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G +G+LGHG+ +L L P+ + L+ + +AG+ HS + + G ++
Sbjct: 75 GRGTTGQLGHGE---MLNSLH------PKPVSSLQSCVITHVSAGWSHSGFVSDIGLLFT 125
Query: 262 FGDRAVDKMLFQEGNHARRPS------------------------LISGGELYTWGSNEN 297
GD + ++ +GN+ + + L++G ++Y +GS +
Sbjct: 126 CGDGSFGQL--GQGNYRSQSTPVKVDYFANNFVNQIACGMRHSLVLLNGNQVYGFGSGKR 183
Query: 298 GCLGIG--SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 347
G LGI ++ P+ G + + +S H+AAIS +G + TWG G
Sbjct: 184 GQLGISRDKTKSINLPQVTCG-LEDVQIVSISANGDHSAAISADGHLYTWGRG 235
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 85/207 (41%), Gaps = 52/207 (25%)
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
++ SWGAG G+LG G + EY P+L+ + +A AC
Sbjct: 15 QIWSWGAGTEGQLGTG---------KLEDEYLPQLLH----LPFLSSAESISTLAC---- 57
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGS-IDVLHSPERVQ 315
G ++ +L SGG ++TWG G LG G ++ LH P+ V
Sbjct: 58 GGAHVI-------------------ALTSGGRVFTWGRGTTGQLGHGEMLNSLH-PKPVS 97
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ VS GW H+ +S+ G + T G G+F GQLG GN
Sbjct: 98 -SLQSCVITHVSAGWSHSGFVSDIGLLFTCG----DGSF--------GQLGQGNYRSQST 144
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V++ N Q++CG H+ LL
Sbjct: 145 PVKVDYFANNFVNQIACGMRHSLVLLN 171
>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 1525
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 143/308 (46%), Gaps = 53/308 (17%)
Query: 43 WGNGDYGRLGLGS---LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG G+LGLGS ++ RP +A + A+ACGG+H+L + G +++ G N
Sbjct: 1057 WGYNSDGQLGLGSSGTYSTKNRPQKINAISN--VAAIACGGSHSLAVARDGSLWSWGYNY 1114
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+GQLG+ +N + P +++ + V I+ G ++S A+T DG ++ WG NS+GQLGLG
Sbjct: 1115 YGQLGLGDNYSKTT-PQKVNAISN-VAAIAAGEYYSLALTRDGSVWSWGDNSDGQLGLGD 1172
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P KVE LS + A G + S+A+T G V SW GR GQ LG
Sbjct: 1173 NEDR--NTPQKVEVLSNV--AAIAAGEDHSLALTRDGSVWSW-----GRNSRGQ----LG 1219
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ TP+ + + +K AAG HS I E G
Sbjct: 1220 LDDNDDRNTPQPVTTIS--NIKAIAAGNSHSFAISEEGLA-------------------- 1257
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
+ WG N +G LGIG+ L + Q S V +S G H+ A++E
Sbjct: 1258 ----------WAWGYNYDGQLGIGTSGSLANENTPQKVKVISNVVGLSGGNYHSLALTED 1307
Query: 340 KILTWGWG 347
L W WG
Sbjct: 1308 GAL-WAWG 1314
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 125/232 (53%), Gaps = 16/232 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LGLG S+ P +A + A+A G H+L LT G +++ G N +GQ
Sbjct: 621 WGYNYYGQLGLGDNVSKTTPRKVNALSN--VVAMAAGDRHSLALTLDGSLWSWGDNTYGQ 678
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ +N + P +++ + VV I+ GY HS A+T DG ++ WG N+ GQLGLG
Sbjct: 679 LGLGDN-DHRNTPRKVNAISN-VVAIAAGYRHSLALTRDGSVWSWGNNTRGQLGLGDNDD 736
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P P V +S I K A+G S+A++ G V +WG SG+LG G S+
Sbjct: 737 RNTPQP--VTTISNI--KAIAVGNNYSIAISEEGLVWAWGYNCSGQLGIGTHGSL----- 787
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
E TP+ + + V V + +AG HS + E+G ++ +G+ ++ +E
Sbjct: 788 -ADENTPQKVIVISNV-VGL-SAGSSHSIALTEDGALWAWGNNEAGQIAAEE 836
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 141/320 (44%), Gaps = 60/320 (18%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
RP +A + A+ACGG+H+L L G ++ G N +GQLG+ +N+ + P +++
Sbjct: 589 RPQKINAISN--VAAIACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTT-PRKVNA 645
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
L VV ++ G HS A+T+DG L+ WG N+ GQLGLG + P KV +S +
Sbjct: 646 LSN-VVAMAAGDRHSLALTLDGSLWSWGDNTYGQLGLGDNDHR--NTPRKVNAISNVVA- 701
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
A G+ S+A+T G V SWG G+LG G + TP+ + + +
Sbjct: 702 -IAAGYRHSLALTRDGSVWSWGNNTRGQLGLGD---------NDDRNTPQPVTTIS--NI 749
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCL 300
K A G +S I E G V + WG N +G L
Sbjct: 750 KAIAVGNNYSIAISEEGLV------------------------------WAWGYNCSGQL 779
Query: 301 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 360
GIG+ L Q S V +S G H+ A++E L W W G++
Sbjct: 780 GIGTHGSLADENTPQKVIVISNVVGLSAGSSHSIALTEDGAL-WAW----------GNNE 828
Query: 361 GGQLGHGNDVDYIHPTIVNF 380
GQ+ ++YI + F
Sbjct: 829 AGQIAAEEAIEYIDNPVQVF 848
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 134/295 (45%), Gaps = 43/295 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG+G ++R P + A+A G H L T++G V+A G ND GQ
Sbjct: 141 WGGNYYGQLGMGDNDNRLTPSKTPGLSD--VAAIAGGDYHALAATQSGEVWAMGRNDHGQ 198
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + ++ P++++GL V ++ G S A+ DG ++ WG N + QLG G A
Sbjct: 199 LGFTGD--HADAPVQVAGLSN-VKSVAAGEFFSLALKNDGTVWAWGNNESAQLGTG-IAG 254
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ + P + LS I A G ++A+ G V +WGA GSG+LG G
Sbjct: 255 EAVATPAPIAVLSNI--TAIAAGRRHAMALAEDGSVWAWGANGSGQLGFGD--------- 303
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ P + L V A+G+ HS + +G ++ +G+ ++ + P+
Sbjct: 304 FETPKAPGRVSSL--ADVTAIASGWFHSLALTSDGVLWAWGNNGDGRLGTDATSDQSLPA 361
Query: 283 LISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
+S G +++WG N G LG+ S+ +P V P
Sbjct: 362 QVSSISNAVSFAGGQRHSLAIAADGSVWSWGGNAYGQLGVESL----TPASVLTP 412
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 148/332 (44%), Gaps = 67/332 (20%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE--PLRISGLKKEVVQISTGY 132
++A GG H L L G V++ G N GQLG+ YS E P +I+ + V I+ G
Sbjct: 548 SIAAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISN-VAAIACGG 606
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
HS A+ DG + WG N GQLGLG +K P KV LS + A G S+A+
Sbjct: 607 SHSLALARDGSFWSWGYNYYGQLGLGDNVSKT--TPRKVNALSNVVAMAA--GDRHSLAL 662
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G + SWG G+LG G + TPR + + V V I AAG+ HS
Sbjct: 663 TLDGSLWSWGDNTYGQLGLGD---------NDHRNTPRKVNAISNV-VAI-AAGYRHSLA 711
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ +G V ++WG+N G LG+G D ++P+
Sbjct: 712 LTRDGSV------------------------------WSWGNNTRGQLGLGDNDDRNTPQ 741
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG---HGND 369
V + S + ++ G ++ AISE + L W W G++ GQLG HG+
Sbjct: 742 PVT---TISNIKAIAVGNNYSIAISE-EGLVWAW----------GYNCSGQLGIGTHGSL 787
Query: 370 VDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
D P V NV L S G +H+ AL E
Sbjct: 788 ADENTPQKVIVISNVVGL--SAGSSHSIALTE 817
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 148/329 (44%), Gaps = 45/329 (13%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG DY +LGLG +R P + ++A G +L L G ++A G N +G
Sbjct: 90 VWGRNDYNQLGLGDDINRLAPEQAPVVSN--IVSVAAGRLFSLALASDGSLWAWGGNYYG 147
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+ +N L P + GL +V I+ G +H+ A T GE++ G+N +GQLG
Sbjct: 148 QLGMGDNDN-RLTPSKTPGL-SDVAAIAGGDYHALAATQSGEVWAMGRNDHGQLGFTGDH 205
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
A P +V LS + K A G S+A+ G V +WG S +LG G +
Sbjct: 206 ADA---PVQVAGLSNV--KSVAAGEFFSLALKNDGTVWAWGNNESAQLGTG--------I 252
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ TP I L + AAG H+ + E+G V+ +G ++ F + + P
Sbjct: 253 AGEAVATPAPIAVLS--NITAIAAGRRHAMALAEDGSVWAWGANGSGQLGFGDFETPKAP 310
Query: 282 --------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S G L+ WG+N +G LG + P +V S S
Sbjct: 311 GRVSSLADVTAIASGWFHSLALTSDGVLWAWGNNGDGRLGTDATSDQSLPAQVS---SIS 367
Query: 322 PVDQVSCGWKHTAAI-SEGKILTWGWGGS 349
+ G +H+ AI ++G + W WGG+
Sbjct: 368 NAVSFAGGQRHSLAIAADGSV--WSWGGN 394
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 129/287 (44%), Gaps = 43/287 (14%)
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
H+L L G V+ G ND+ QLG+ ++I L P + + +V ++ G S A+ D
Sbjct: 78 HSLALKGDGTVWVWGRNDYNQLGLGDDIN-RLAPEQAP-VVSNIVSVAAGRLFSLALASD 135
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G L+ WG N GQLG+G ++ P+K LS + A G ++A T G+V +
Sbjct: 136 GSLWAWGGNYYGQLGMGDNDNRL--TPSKTPGLSDV--AAIAGGDYHALAATQSGEVWA- 190
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
GR HGQ LGF T ++ ++ VK AAG S + +G V+
Sbjct: 191 ----MGRNDHGQ----LGF---TGDHADAPVQVAGLSNVKSVAAGEFFSLALKNDGTVWA 239
Query: 262 FGDRAVDKM---LFQEGNHARRP------------------SLISGGELYTWGSNENGCL 300
+G+ ++ + E P +L G ++ WG+N +G L
Sbjct: 240 WGNNESAQLGTGIAGEAVATPAPIAVLSNITAIAAGRRHAMALAEDGSVWAWGANGSGQL 299
Query: 301 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 347
G G + +P RV S + V ++ GW H+ A++ +L W WG
Sbjct: 300 GFGDFETPKAPGRVS---SLADVTAIASGWFHSLALTSDGVL-WAWG 342
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 133/294 (45%), Gaps = 40/294 (13%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLRISGLKKEVVQISTGYHH 134
+A GG +L L G +++ G N GQLG+ ++ P ++ L +I+ G +H
Sbjct: 986 VAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALPP-AAKIAAGDNH 1044
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+ A+ DG ++ WG NS+GQLGLG P K+ +S + A G S+AV
Sbjct: 1045 ALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNV--AAIACGGSHSLAVA 1102
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G + SWG G+LG G + S+ TP+ + + V AAG +S +
Sbjct: 1103 RDGSLWSWGYNYYGQLGLGD---------NYSKTTPQKVNAIS--NVAAIAAGEYYSLAL 1151
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRP--------------------SLISGGELYTWG 293
+G V+ +GD + ++ + P +L G +++WG
Sbjct: 1152 TRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLSNVAAIAAGEDHSLALTRDGSVWSWG 1211
Query: 294 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 347
N G LG+ D ++P+ V + S + ++ G H+ AISE + L W WG
Sbjct: 1212 RNSRGQLGLDDNDDRNTPQPVT---TISNIKAIAAGNSHSFAISE-EGLAWAWG 1261
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 133/313 (42%), Gaps = 61/313 (19%)
Query: 83 TLFLTETGCVYAT-----GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
T+FL G +A G+ D Q G +N + EP +G +++ HS A
Sbjct: 25 TIFLIAPGAAFAADSDGDGVED-AQDGCPDNF-FKSEP-GFTGCGNAEPMVASRLDHSLA 81
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+ DG +++WG+N QLGLG ++ P + +S I + A F S+A+ G
Sbjct: 82 LKGDGTVWVWGRNDYNQLGLGDDINRL--APEQAPVVSNIVSVAAGRLF--SLALASDGS 137
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+ +WG G+LG G + R T TP L V A G H+ ++G
Sbjct: 138 LWAWGGNYYGQLGMGDNDN-----RLTPSKTPGL------SDVAAIAGGDYHALAATQSG 186
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISG--------------------GELYTWGSNEN 297
V+ G ++ F G+HA P ++G G ++ WG+NE+
Sbjct: 187 EVWAMGRNDHGQLGFT-GDHADAPVQVAGLSNVKSVAAGEFFSLALKNDGTVWAWGNNES 245
Query: 298 GCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 355
LG G + + + +P + S + ++ G +H A++E G + WG GS
Sbjct: 246 AQLGTGIAGEAVATPAPIA---VLSNITAIAAGRRHAMALAEDGSVWAWGANGS------ 296
Query: 356 DGHSSGGQLGHGN 368
GQLG G+
Sbjct: 297 ------GQLGFGD 303
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 135/305 (44%), Gaps = 48/305 (15%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
SG ++ G + S A+ DG L+ WG N GQLGLG + + PTKV+ L
Sbjct: 976 FSGCGNPNPMVAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALPP- 1034
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+ A G ++A+ G V SWG G+LG G + +++ P+ I +
Sbjct: 1035 -AAKIAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTY------STKNRPQKINAIS- 1086
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFG---------DRAVDKMLFQEGNHARRPSLISGGE 288
V A G HS + +G ++ +G K Q+ N + I+ GE
Sbjct: 1087 -NVAAIACGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKVNAISNVAAIAAGE 1145
Query: 289 LY-----------TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
Y +WG N +G LG+G + ++P++V+ S V ++ G H+ A++
Sbjct: 1146 YYSLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVE---VLSNVAAIAAGEDHSLALT 1202
Query: 338 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
+G + +W G +S GQLG ++ D P V N+KA ++ G +H+
Sbjct: 1203 RDGSVWSW------------GRNSRGQLGLDDNDDRNTPQPVTTISNIKA--IAAGNSHS 1248
Query: 397 GALLE 401
A+ E
Sbjct: 1249 FAISE 1253
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 15/109 (13%)
Query: 43 WGNGDYGRLGLG---SLESRWRP---VVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
WG G+LG+G SL P +V S ++ L+ G +H++ LTE G ++A G
Sbjct: 771 WGYNCSGQLGIGTHGSLADENTPQKVIVIS-----NVVGLSAGSSHSIALTEDGALWAWG 825
Query: 97 LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
N+ GQ+ E I Y P+++ EV + Y A D ELY
Sbjct: 826 NNEAGQIAAEEAIEYIDNPVQVF-QSGEVFHL---YFDVDADGADDELY 870
>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Felis catus]
Length = 527
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 115/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 99 WGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++G K VV I+ G S A+ GE+Y+WG N NGQLGLG
Sbjct: 159 QVGSGSTANQPI-PRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P ++ L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 218 SGNQ--PTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 269
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y ++ E + + ++IAA H SA + G VY++G
Sbjct: 270 --KSNQSYPAPVVVEKDRI-IEIAACHLAHTSAAKTQGGHVYMWG 311
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 113/219 (51%), Gaps = 16/219 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V +++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 111 TTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 168
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 169 PIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SG 219
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++ TP I L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 220 NQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 146/347 (42%), Gaps = 60/347 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 64
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 65 PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTN 124
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 125 -LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 174
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW 292
+ C+ V I A +M ++++ GE+Y W
Sbjct: 175 -----------------TGCLQNKVVVNI----ACGQMC--------SMAVVNTGEVYVW 205
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 351
G N NG LG+GS +P R+ V +V+CG+ HT ++ EG++ WG
Sbjct: 206 GYNGNGQLGLGSSGNQPTPCRISA-LQGIRVQRVACGYAHTLVLTDEGQVYAWG------ 258
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +P V ++ +C HT A
Sbjct: 259 ------ANSYGQLGTGNKSNQSYPAPVVVEKDRIIEIAACHLAHTSA 299
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P SA + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 264 QLGTGNKSNQSY-PAPVVVEKDRIIEIAACHLAHTSAAKTQGGHVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 --SVILPHLTHFSCTDDVF 333
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 112/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ LSG K A L + V T
Sbjct: 38 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIACLSYGSGPHIVLATTE 93
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 94 GEVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEV--------ACGSYHSL---- 141
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 142 --------------------------VLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 175
Query: 316 GPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG + A ++ G++ WG+ G+ GQLG G+ +
Sbjct: 176 GCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGN------------GQLGLGSSGNQPT 223
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P ++ + ++ +V+CG+ HT L +
Sbjct: 224 PCRISALQGIRVQRVACGYAHTLVLTD 250
>gi|149033232|gb|EDL88033.1| potential ubiquitin ligase, isoform CRA_a [Rattus norvegicus]
Length = 449
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 121/244 (49%), Gaps = 8/244 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG S +S RP A + ++CG H++ + G V+ G GQL
Sbjct: 46 GDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQL 105
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E+ S P +I+ L +++Q+S G++HS A++ DG+++ WG N GQLGLG
Sbjct: 106 GIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLC 165
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P KV+ L GI Q A G S A++ G WG SG+L ++ G
Sbjct: 166 SQAS-PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQL------ALSGNSA 218
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H++ + E+G+V+ FG + +++ + P
Sbjct: 219 KEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQ 278
Query: 283 LISG 286
LI G
Sbjct: 279 LIEG 282
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 153/334 (45%), Gaps = 62/334 (18%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
LKA A G H+L L VY+ G N GQLG ++ + P I L + +S G
Sbjct: 24 LKA-ASGERHSLLLFSNHRVYSCGDNSRGQLG-QKSPQSTKRPEPIQALSTVHIDLVSCG 81
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+ G ++ WG S GQLG+G ++ ++ +PTK+ L+GI Q + G S+A
Sbjct: 82 KEHSVAVCHQGRVFTWGAGSEGQLGIG-ESKEISFMPTKINSLAGIKIIQVSCGHYHSLA 140
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ G+V SWG+ G+LG G S+ +P+ +K LEG+ + AAG
Sbjct: 141 LSEDGQVFSWGSNRQGQLGLGNN--------LCSQASPQKVKSLEGIPLAQVAAG----- 187
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGI---GSIDVL 308
G H+ SL+ G + WG+N +G L + + + +
Sbjct: 188 -----------------------GTHSFALSLM--GTSFGWGNNRSGQLALSGNSAKEQI 222
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
+ P + G V +SCG++HT+ ++E G++ T+G SS QL H
Sbjct: 223 YKPHSI-GALKTLNVVYISCGYEHTSVLTEDGQVFTFGG------------SSSEQLQHS 269
Query: 368 NDVDYIHPTIVN-FGENVKALQVSCGFNHTGALL 400
P ++ G +V Q+ CG HT A +
Sbjct: 270 PRSGRGGPQLIEGIGGHVS--QIECGSYHTIAYV 301
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 134/291 (46%), Gaps = 53/291 (18%)
Query: 114 EPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
+P R+ +G ++++ ++G HS + + +Y G NS GQLG +K+ + P ++
Sbjct: 11 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLG--QKSPQSTKRPEPIQ 68
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + + G E SVAV G+V +WGAG G+LG G+ I + P I
Sbjct: 69 ALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEI--------SFMPTKI 120
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW 292
L G+K+ + G HS + E+G+V+ +W
Sbjct: 121 NSLAGIKIIQVSCGHYHSLALSEDGQVF------------------------------SW 150
Query: 293 GSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSH- 350
GSN G LG+G+ + SP++V+ P+ QV+ G H+ A+S ++GWG +
Sbjct: 151 GSNRQGQLGLGNNLCSQASPQKVKS-LEGIPLAQVAAGGTHSFALSLMGT-SFGWGNNRS 208
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G + G+S+ Q+ P + + + + +SCG+ HT L E
Sbjct: 209 GQLALSGNSAKEQI--------YKPHSIGALKTLNVVYISCGYEHTSVLTE 251
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 12/224 (5%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G S E + P ++ + ++CG H+L L+E G V++ G N G
Sbjct: 97 WGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQG 156
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ N+ P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 157 QLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGN 216
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
A + I P + L + + G+E + +T G+V ++G S +L H S G
Sbjct: 217 SAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGG 276
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+LI+ + G +I + A + G+V G
Sbjct: 277 ---------PQLIEGIGGHVSQIECGSYHTIAYVYTTGQVVSLG 311
>gi|224053260|ref|XP_002297742.1| predicted protein [Populus trichocarpa]
gi|222845000|gb|EEE82547.1| predicted protein [Populus trichocarpa]
Length = 1063
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 175/370 (47%), Gaps = 72/370 (19%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQ-IS 129
++A+ACG H +T+ G V++ G G+L G+ ++ + P + GLK V+ ++
Sbjct: 273 VQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH---PKFVDGLKNFNVELVA 329
Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
G + S A+T+ G+LY+WG N+ G LG G +A + +P K+ L GI + G
Sbjct: 330 CGEYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQW--VPRKLSGPLEGIHVSSVSCGP 387
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+ VT G++ ++G G G LGHG SS+ TPR ++ L+G++ A G
Sbjct: 388 WHTAVVTSAGQLFTFGDGTFGVLGHGDRSSV---------STPREVESLKGLRTMRVACG 438
Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR-----------PS- 282
H+A + E +G+++ +GD DK G+ R PS
Sbjct: 439 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKGRLGHGDKEARLVPTYVATLVEPSF 496
Query: 283 ------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 330
L + G++YT GS G LG D P RV+G ++ V++++CG
Sbjct: 497 CQVACGHSLTVALTTSGQVYTMGSPVYGQLGNPQADG-KVPTRVEGKLMKNFVEELACGA 555
Query: 331 KHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 389
H A + S ++ TWG G + G+LGHG+ D P+IV ++ + +
Sbjct: 556 YHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRNFPSIVEALKDKQVKGI 603
Query: 390 SCGFNHTGAL 399
CG + T A+
Sbjct: 604 ICGTSFTAAI 613
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 69/126 (54%), Gaps = 4/126 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G E+R P + + S +ACG + T+ LT +G VY G +GQ
Sbjct: 466 WGDGDKGRLGHGDKEARLVPTYVATLVEPSFCQVACGHSLTVALTTSGQVYTMGSPVYGQ 525
Query: 103 LGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + G P R+ G +K V +++ G +H + +T E+Y WGK +NG+LG G
Sbjct: 526 LGNPQADGKV--PTRVEGKLMKNFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGDT 583
Query: 161 AAKVIP 166
+ P
Sbjct: 584 DDRNFP 589
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 102/238 (42%), Gaps = 50/238 (21%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G + + VT G+V SWG GRLGHG +S +
Sbjct: 261 VPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDV--------- 311
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
P+ + L+ V++ A G S + +G +YI+ G
Sbjct: 312 SHPKFVDGLKNFNVELVACGEYLSCAVTLSGDLYIW-----------------------G 348
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 345
G Y + G LG GS P ++ GP V VSCG HTA + S G++ T+G
Sbjct: 349 GNAYNF-----GLLGCGSEATQWVPRKLSGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 403
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
GTF G LGHG+ P V + ++ ++V+CG HT A++E +
Sbjct: 404 ----DGTF--------GVLGHGDRSSVSTPREVESLKGLRTMRVACGVWHTAAVVEVM 449
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 108/280 (38%), Gaps = 78/280 (27%)
Query: 42 LWGNGDY--GRLGLGSLESRWRPVVCS-AFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
+WG Y G LG GS ++W P S E + +++CG HT +T G ++ G
Sbjct: 346 IWGGNAYNFGLLGCGSEATQWVPRKLSGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 405
Query: 99 DFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAIT------------VDGELY 145
FG LG + S P + LK ++++ G H++A+ G+L+
Sbjct: 406 TFGVLGHGDRSSVST-PREVESLKGLRTMRVACGVWHTAAVVEVMVGSSSSSNCSSGKLF 464
Query: 146 MWGKNSNGQLGLGKKAAKVIP--------------------------------------- 166
WG G+LG G K A+++P
Sbjct: 465 TWGDGDKGRLGHGDKEARLVPTYVATLVEPSFCQVACGHSLTVALTTSGQVYTMGSPVYG 524
Query: 167 ----------IPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+PT+VE L F ++ A G +T +V +WG G +GRLGHG
Sbjct: 525 QLGNPQADGKVPTRVEGKLMKNFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGD-- 582
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFLHSACI 253
+ P +++ L+ +VK I F + C+
Sbjct: 583 -------TDDRNFPSIVEALKDKQVKGIICGTSFTAAICL 615
>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
carolinensis]
Length = 4839
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 46/301 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4068 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGR 4127
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4128 LGHGDSED-QLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4185
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4186 -GSDGCKVPMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4242
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4243 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4273
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ +++V+CG HT A S
Sbjct: 4274 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACGSAHTLAWSTS 4324
Query: 340 K 340
K
Sbjct: 4325 K 4325
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 142/304 (46%), Gaps = 46/304 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y+ GL ++G+
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3134
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3135 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3192
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3193 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV-- 3249
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + + G+VY
Sbjct: 3250 -------RKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVY------------------- 3283
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
WG N++G G G+ V P VQG + +V+CG H+ + +
Sbjct: 3284 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVSWTTM 3331
Query: 340 KILT 343
+ T
Sbjct: 3332 DVAT 3335
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 155/337 (45%), Gaps = 50/337 (14%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2965 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3024
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G ++A+T GKV SWG G G+L
Sbjct: 3025 NGRLGLGLSSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3083
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------ 263
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G
Sbjct: 3084 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3134
Query: 264 -----------DRAVDKMLFQE-------GNHARRPSLISGGELYTWGSNENGCLGIGSI 305
+ V +L A+ +L G +++WG + G LG G
Sbjct: 3135 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3194
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 364
+ + P+ ++ + V Q+ CG + + A+++ G + TWG G +L
Sbjct: 3195 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3241
Query: 365 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GHG DV P +V K + V+ G H A+ +
Sbjct: 3242 GHGTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTD 3278
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 170/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3962 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4019
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4020 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4077
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S +T G + +WG G GRLGHG
Sbjct: 4078 HGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGD--- 4132
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4133 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4187 SDGCKVPMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4246
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4247 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4293
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4294 IQRPRLVAALQGKKINRVACGSAHTLA 4320
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 161/347 (46%), Gaps = 53/347 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3063 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3120
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ SWG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3121 SGELYSWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3231
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG G+ + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3232 TWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIIHVAVGALHCLAVTDTGQVYAWG---- 3286
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
++ H GQ G+G PT+V E K +V+CG +H+
Sbjct: 3287 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3325
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG V++ G D G+LG + + EP IS L K VV I+ G +
Sbjct: 505 GHHYLALAATGEVFSWGCGDGGRLGHGDTVPLE-EPKMISALSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ + G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + + + G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVSCGSQFSVA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E+Y
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVY 732
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ R+ P P KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTL-------RITKP---DPTALPGLDSKHIVGIACGPAQSFAW 777
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + SA KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ +S +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + + G + SVA+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AG H + E+ VY +G
Sbjct: 696 EHV---------RYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVYSWG 735
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 150/353 (42%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ +G P + L
Sbjct: 443 PIQCEGLASLGVTQIACAEKRFLILSRNGRVYTQAYN-------SDILG----PQLVQSL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE++ WG G+LG G +P+ P + LSG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHG----DTVPLEEPKMISALSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S + P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 595
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV + G GD A+ ++ G++
Sbjct: 596 MLVTGLKGLKVIDVSCG---------------SGD-------------AQTLAVTENGQV 627
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + + +VSCG + + A++ +G++ +WG G
Sbjct: 628 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDIVKVSCGSQFSVALTKDGQVYSWGKGD 686
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V G H AL E
Sbjct: 687 NQ------------RLGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTE 727
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 144/335 (42%), Gaps = 53/335 (15%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
+G +Y G N GQLG E + P L VQ+ G A+T DG+LY
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGG 205
G + G+LG + + PT +E + +F K+ A+ G + +A++ G+V SWG
Sbjct: 4015 GYGAGGRLG--IGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LGHG S PR+I+ L G++V AAG HSACI G +Y +G
Sbjct: 4073 DGKLGHGNRSPC---------DRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKG 4123
Query: 266 AVDKMLFQEGNHARRPSLISGGE------------------------LYTWGSNENGCLG 301
++ + +P L+ + +++WG + G LG
Sbjct: 4124 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4183
Query: 302 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSS 360
G D P ++ + V +V CG + + A+++ G + TWG G H
Sbjct: 4184 RGGSDGCKVPMKIDS-LTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYH---------- 4232
Query: 361 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
+LGHG+D P V + K + ++ G H
Sbjct: 4233 --RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4265
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2957 SVATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G L S + PR I L VK A +HS
Sbjct: 3015 GKVYACGEATNGRLGLG--------LSSGTVPIPRQITALSNYVVKKVA---VHSG---- 3059
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3060 -------------------GRHAM--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3098
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AAI S G++ +WG G G+LGHG++ +
Sbjct: 3099 A-LKTKRIRDIACGSSHSAAITSSGELYSWGLG------------EYGRLGHGDNTTQLK 3145
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3146 PKMVKVLLGHRVIQVACGSRDAQTL 3170
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
WG GD RLG G+ E P + + + + G H L LTE VY+ G ND
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVYSWGSNDQCQ 741
Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
F L I++ +P + GL K +V I+ G S A
Sbjct: 742 HFDTLRITKP-----DPTALPGLDSKHIVGIACGPAQSFA 776
>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Felis catus]
Length = 551
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 115/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++G K VV I+ G S A+ GE+Y+WG N NGQLGLG
Sbjct: 183 QVGSGSTANQPI-PRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS 241
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P ++ L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 242 SGNQ--PTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 293
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y ++ E + + ++IAA H SA + G VY++G
Sbjct: 294 --KSNQSYPAPVVVEKDRI-IEIAACHLAHTSAAKTQGGHVYMWG 335
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 113/219 (51%), Gaps = 16/219 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V +++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++ TP I L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 244 NQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 146/347 (42%), Gaps = 60/347 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 30 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 88
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 89 PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTN 148
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 149 -LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW 292
+ C+ V I A +M ++++ GE+Y W
Sbjct: 199 -----------------TGCLQNKVVVNI----ACGQMCSM--------AVVNTGEVYVW 229
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 351
G N NG LG+GS +P R+ V +V+CG+ HT ++ EG++ WG
Sbjct: 230 GYNGNGQLGLGSSGNQPTPCRISA-LQGIRVQRVACGYAHTLVLTDEGQVYAWG------ 282
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +P V ++ +C HT A
Sbjct: 283 ------ANSYGQLGTGNKSNQSYPAPVVVEKDRIIEIAACHLAHTSA 323
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P SA + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PAPVVVEKDRIIEIAACHLAHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 112/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ LSG K A L + V T
Sbjct: 62 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIACLSYGSGPHIVLATTE 117
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEV--------ACGSYHSLV--- 166
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 167 ---------------------------LTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199
Query: 316 GPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG + A ++ G++ WG+ G+ GQLG G+ +
Sbjct: 200 GCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGN------------GQLGLGSSGNQPT 247
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P ++ + ++ +V+CG+ HT L +
Sbjct: 248 PCRISALQGIRVQRVACGYAHTLVLTD 274
>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
PN500]
Length = 1626
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 148/325 (45%), Gaps = 55/325 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG--CVYATGLNDF 100
WG G YGRLG G ES P A +K + CGG T+ L+ T +Y G N+F
Sbjct: 153 WGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFCGGRSTIALSHTAGSGLYTWGNNEF 212
Query: 101 GQLG---ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQLG ++ E + + G K+ +V + G ++ I G L+ WG+ +G+LG
Sbjct: 213 GQLGRGDCGDDFTCLPESVAVPGAKR-LVALDAGASRAAVIDSSGALFTWGRGDHGRLGH 271
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + PT V L G ALG S+A+T G++ SWG G +G+LGHG S
Sbjct: 272 GDTENRY--QPTLVSSLYGHVVVAVALGGGHSLALTKAGELFSWGRGENGQLGHGSYQS- 328
Query: 218 LGFLRSTSEYTPRLIKELEGVK--VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ P+ ++ + + I+A G+ A +D+
Sbjct: 329 -------QQLAPKQLQFFVDMPKIIGISAGGYHSVAQLDD-------------------- 361
Query: 276 NHARRPSLISGGELYTWGSNENGCLGIGSID--VLHSPERVQGPFSESPVDQVSCGWKHT 333
G +Y WG ++ G LG G D ++ P+R+ P +SCG++HT
Sbjct: 362 -----------GSVYAWGMSDYGILGTGDSDDGAINIPQRILMPRGIR-FKTISCGFQHT 409
Query: 334 AAI-SEGKILTW--GWGGSHGTFSE 355
A+ S+ I +W G GG GTF+E
Sbjct: 410 VALTSDNTIYSWGCGLGGRLGTFNE 434
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 95/176 (53%), Gaps = 2/176 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G E+R++P + S+ H + A+A GG H+L LT+ G +++ G + GQ
Sbjct: 261 WGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALGGGHSLALTKAGELFSWGRGENGQ 320
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG L P ++ +++ IS G +HS A DG +Y WG + G LG G
Sbjct: 321 LGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVAQLDDGSVYAWGMSDYGILGTGDS 380
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
I IP ++ GI K + GF+ +VA+T + SWG G GRLG E +
Sbjct: 381 DDGAINIPQRILMPRGIRFKTISCGFQHTVALTSDNTIYSWGCGLGGRLGTFNEKN 436
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 134/317 (42%), Gaps = 71/317 (22%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
++ ++ ++ G H + I+ G+L+ WG+ G+LG G + + I P +V L+ I K
Sbjct: 128 EERIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEES--ISTPKQVVALANIPMKY 185
Query: 182 AALGFEQSVAV--TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
G ++A+ T G + +WG G+LG G L P + + G K
Sbjct: 186 VFCGGRSTIALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCL-------PESVA-VPGAK 237
Query: 240 VKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR----------RPSLIS--- 285
+A AG +A ID +G ++ +G G+H R +P+L+S
Sbjct: 238 RLVALDAGASRAAVIDSSGALFTWG----------RGDHGRLGHGDTENRYQPTLVSSLY 287
Query: 286 -------------------GGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQ 325
GEL++WG ENG LG GS +P+++Q +
Sbjct: 288 GHVVVAVALGGGHSLALTKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIG 347
Query: 326 VSCGWKHTAA-ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD-YIH-PTIVNFGE 382
+S G H+ A + +G + WG S G LG G+ D I+ P +
Sbjct: 348 ISAGGYHSVAQLDDGSVYAWGM------------SDYGILGTGDSDDGAINIPQRILMPR 395
Query: 383 NVKALQVSCGFNHTGAL 399
++ +SCGF HT AL
Sbjct: 396 GIRFKTISCGFQHTVAL 412
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 43 WGNGDYGRLGLGSLESR-WRPVVCSAF-EKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG G+ G+LG GS +S+ P F + + ++ GG H++ + G VYA G++D+
Sbjct: 313 WGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVAQLDDGSVYAWGMSDY 372
Query: 101 GQLGISENIGYSLE-PLRI---SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G LG ++ ++ P RI G++ + IS G+ H+ A+T D +Y WG G+LG
Sbjct: 373 GILGTGDSDDGAINIPQRILMPRGIRFKT--ISCGFQHTVALTSDNTIYSWGCGLGGRLG 430
Query: 157 LGKKAAKVIPI 167
+ + PI
Sbjct: 431 TFNEKNQCAPI 441
>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
Length = 3628
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 143/319 (44%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P + +K +A GG H L LT+ G V++ G + G
Sbjct: 2647 GEGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 2706
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG I +P I LK K + I+ G HS+AI +GELY WG G+LG G
Sbjct: 2707 KLGHGNCISLD-KPKLIEILKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDT 2765
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P V+ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 2766 ITQTRP--KLVQALVGQRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGG----- 2818
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S YTP + L G+ V G S + + G V+ +G ++ +H
Sbjct: 2819 ----SDGCYTPLAVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 2874
Query: 279 RRPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R+P+L+ G G++Y WG N++G G G+ V P V
Sbjct: 2875 RKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGATSVNRKPSLVHD 2934
Query: 317 PFSESPVDQVSCGWKHTAA 335
++ V++VSCG H+ A
Sbjct: 2935 -LEDARVNRVSCGSSHSIA 2952
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 158/354 (44%), Gaps = 77/354 (21%)
Query: 88 ETGCVYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
+ VY GLND QLG I + L+P+ I+G K + +S
Sbjct: 2587 QQSAVYVWGLNDKDQLGGLKGSKIKLPIYSEVLSKLKPIHIAGGSKTLFIVSQ------- 2639
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGG 195
+G+LY G+ +NG+LGLG + P + LS K+ A+ G + ++A+T
Sbjct: 2640 ---EGKLYACGEGTNGRLGLGDD--NNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQD 2694
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV SWG G G+LGHG S+ P+LI+ L+ +++ A G HSA I
Sbjct: 2695 GKVFSWGEGEDGKLGHGNCISL---------DKPKLIEILKSKRIRDIACGSGHSAAIAS 2745
Query: 256 NGRVYIFG-----------------DRAVDKMLFQE-------GNHARRPSLISGGELYT 291
NG +Y +G + V ++ Q A+ +L + G +Y+
Sbjct: 2746 NGELYTWGLGEYGRLGHGDTITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTDGCVYS 2805
Query: 292 WGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 347
WG + G LG G D ++P +R+ G V QV CG + + A+++ G++ TWG G
Sbjct: 2806 WGDGDFGKLGRGGSDGCYTPLAVDRLNG----LGVIQVECGAQFSLALTKYGEVWTWGKG 2861
Query: 348 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHGND PT+V K + V+ G H A+ +
Sbjct: 2862 DYF------------RLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTD 2903
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 192/417 (46%), Gaps = 59/417 (14%)
Query: 13 YLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKH 71
+L D ++ + +R + Q+ +WG D +LG G S+ + P+ K
Sbjct: 2564 FLASDWEVLQEQVAIQRSTDTPPQQSAVYVWGLNDKDQLG-GLKGSKIKLPIYSEVLSK- 2621
Query: 72 SLKAL-ACGGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-- 127
LK + GG+ TLF+ ++ G +YA G G+LG+ ++ EP I L + V++
Sbjct: 2622 -LKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDD-NNVCEPKAIPFLSQFVIKKV 2679
Query: 128 -ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
+ +G H+ A+T DG+++ WG+ +G+LG G + + P +E L + A G
Sbjct: 2680 AVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCIS--LDKPKLIEILKSKRIRDIACGS 2737
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S A+ G++ +WG G GRLGHG + ++ P+L++ L G +V A G
Sbjct: 2738 GHSAAIASNGELYTWGLGEYGRLGHGD---------TITQTRPKLVQALVGQRVVQVACG 2788
Query: 247 F--LHSACIDENGRVYIFGD-----------------RAVDKM-----LFQEGNHARRPS 282
+ + +G VY +GD AVD++ + E +
Sbjct: 2789 SRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLAVDRLNGLGVIQVECGAQFSLA 2848
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKI 341
L GE++TWG + LG G+ + P V+G + V+ G H A+++ G++
Sbjct: 2849 LTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEG-LRGKKIIHVAVGALHCLAVTDTGQV 2907
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
WG ++ H GQ G+G P++V+ E+ + +VSCG +H+ A
Sbjct: 2908 YAWG---------DNDH---GQQGNGATSVNRKPSLVHDLEDARVNRVSCGSSHSIA 2952
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 146/342 (42%), Gaps = 56/342 (16%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
T +Y LG K C +R L NG+ + GS E+++ P+ F
Sbjct: 93 TPFYCDPIAGLGIKQLCCT-------ERSLMILSLNGNAYNMYHGS-ETQY-PLRVHGFS 143
Query: 70 KHSLKALA--CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
+ +A G H L LT+ GCVY+ G D G+LG + + Y L S L K +V
Sbjct: 144 DKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIESLLDKNIVF 203
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF- 186
I+ G +S+A++ GELY WG+ + G+LG G + PT V L G A G
Sbjct: 204 IACGSTYSAALSASGELYTWGRGNYGRLGHGN--FDDVLTPTLVTTLKGHTVVHVACGSG 261
Query: 187 -EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
Q++ VT G V SWG G G+LG G + TP+++ +L + V
Sbjct: 262 DSQTLCVTASGIVFSWGDGDYGKLGRGG---------TDGSKTPKIVDKLLDINVVKVFC 312
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSI 305
G SA + +G V YTWG + LG GS
Sbjct: 313 GGQFSAALTAHGEV------------------------------YTWGKGDAYRLGHGSE 342
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 347
+ + P+ ++ + + +S G H A++E + + +GWG
Sbjct: 343 EHVRYPKVIES-LRDKKIKDLSVGTTHILALTEDQFV-YGWG 382
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG G+ + P + + + H++ +ACG + TL +T +G V++ G D+
Sbjct: 223 WGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDY 282
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG G + L VV++ G S+A+T GE+Y WGK +LG G +
Sbjct: 283 GKLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAALTAHGEVYTWGKGDAYRLGHGSE 342
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ + P +E L K ++G +A+T V W GR +GQ LG
Sbjct: 343 --EHVRYPKVIESLRDKKIKDLSVGTTHILALTEDQFVYGW-----GRNDYGQIDPTLGP 395
Query: 221 LRSTSEYTPRL 231
+ S P L
Sbjct: 396 VVSEPTLCPTL 406
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 138/347 (39%), Gaps = 73/347 (21%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE---PLRI 118
P C +K L C + L+ G Y N+ + E PLR+
Sbjct: 94 PFYCDPIAGLGIKQLCCTERSLMILSLNGNAY--------------NMYHGSETQYPLRV 139
Query: 119 SGLKKEVVQISTGY---HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
G + + + + H A+T DG +Y WG G+LG G + P +E L
Sbjct: 140 HGFSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTVS--YDEPKLIESLL 197
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
A G S A++ G++ +WG G GRLGHG +L TP L+ L
Sbjct: 198 DKNIVFIACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVL---------TPTLVTTL 248
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSN 295
+G V +H AC + + + + G +++WG
Sbjct: 249 KGHTV-------VHVACGSGDSQTL---------------------CVTASGIVFSWGDG 280
Query: 296 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 354
+ G LG G D +P+ V + V +V CG + +AA++ G++ TWG G ++
Sbjct: 281 DYGKLGRGGTDGSKTPKIVDKLLDINVV-KVFCGGQFSAALTAHGEVYTWGKGDAY---- 335
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHG++ +P ++ + K +S G H AL E
Sbjct: 336 --------RLGHGSEEHVRYPKVIESLRDKKIKDLSVGTTHILALTE 374
>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
Length = 4933
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 178/387 (45%), Gaps = 57/387 (14%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 4075 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4132
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ + +S+ P + L+ V+ +++G H A+T DGE+Y WG+ +G+LG
Sbjct: 4133 GRLGVGGSDSWSI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH 4191
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P +E L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 4192 GNRLS--YDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4245
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4246 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4300
Query: 276 NHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + P +L G +YTWG + LG GS+D + P++
Sbjct: 4301 DGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKK 4360
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V + ++ G H A S+ G++ TW G + GQLG G
Sbjct: 4361 VAA-LQGKKIISIATGSLHCVACSDAGEVYTW------------GDNDEGQLGDGTVTAI 4407
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGAL 399
P +V + ++V+CG HT AL
Sbjct: 4408 QRPRLVAALQGKHIVKVTCGSAHTLAL 4434
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 136/296 (45%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 3023 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGR 3082
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L V+Q++ G + A+T DG ++ WG G+LG G
Sbjct: 3083 LGHGDN-ATQLKPKLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3141
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3142 SEGSA--TPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3197
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ I L G +V A G LH + + G+V
Sbjct: 3198 -------RKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQV-------------------- 3230
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
Y WG N++G G G+ V P V G V++V+CG H+ A
Sbjct: 3231 ----------YAWGDNDHGQQGSGNTFVNKKPALVIG-LDAVFVNRVACGSSHSMA 3275
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 134/303 (44%), Gaps = 48/303 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + S+ +ACG AH+ +T +G V G +G+
Sbjct: 4181 WGEGEDGKLGHGNRLSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4240
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4241 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4298
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4299 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4355
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P+ + L+G K+ A G LH AC D
Sbjct: 4356 -------RRPKKVAALQGKKIISIATGSLHCVACSD------------------------ 4384
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
GE+YTWG N+ G LG G++ + P R+ + +V+CG HT A+S
Sbjct: 4385 -------AGEVYTWGDNDEGQLGDGTVTAIQRP-RLVAALQGKHIVKVTCGSAHTLALST 4436
Query: 339 GKI 341
++
Sbjct: 4437 SQL 4439
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 149/359 (41%), Gaps = 57/359 (15%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT G V++ G + G
Sbjct: 2970 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3029
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG +P + L+ K++ I+ G HS+AI+ GELY WG G+LG G
Sbjct: 3030 KLGHGNRTTLD-KPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3088
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A ++ P C S + Q++A+T G V SWG G G+LG G
Sbjct: 3089 ATQLKPKLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG------- 3141
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S TP I+ L G+ V G S
Sbjct: 3142 --SEGSATPHEIERLSGIGVVQIECGAQFSL----------------------------- 3170
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-G 339
+L GE++TWG + LG G + P+ + G V V+ G H A+++ G
Sbjct: 3171 -ALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAG-LRGRRVIHVAVGALHCLAVTDAG 3228
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ WG ++ H GQ G GN P +V + V +V+CG +H+ A
Sbjct: 3229 QVYAWG---------DNDH---GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSMA 3275
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 150/348 (43%), Gaps = 73/348 (20%)
Query: 92 VYATGLNDFGQLG-----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
V GLND QLG S+ I L P+ I+G K + +S
Sbjct: 2914 VMVWGLNDKEQLGGLKGSKVKVPTFSQTIS-RLRPIHIAGGSKSLFVVSQ---------- 2962
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
DG+++ G+ +NG+LGLG +P+P ++ L K+ A+ G + ++A+T GKV
Sbjct: 2963 DGKVFACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3020
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG +++ PRL++ L K++ A G HSA I G
Sbjct: 3021 FSWGEGEDGKLGHGNRTTL---------DKPRLVEALRAKKIRDIACGSSHSAAISSQGE 3071
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISG------------------------GELYTWGS 294
+Y +G ++ + +P L++ G +++WG
Sbjct: 3072 LYTWGLGEYGRLGHGDNATQLKPKLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGD 3131
Query: 295 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTF 353
+ G LG G + +P ++ S V Q+ CG + + A++ G++ TWG G +
Sbjct: 3132 GDFGKLGRGGSEGSATPHEIER-LSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYY--- 3187
Query: 354 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHG D P + + + V+ G H A+ +
Sbjct: 3188 ---------RLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTD 3226
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 85/162 (52%), Gaps = 4/162 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDF 100
WG G+YGRLG G + + P + A + H + AL G AHTL LT G VYA G D+
Sbjct: 716 WGRGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDY 775
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + + SL+PL I L + V ++ G S A+T +G+LY WGK S L ++
Sbjct: 776 GKLG-NASCNSSLQPLLIECLPR-VQRVFAGSQFSLALTGEGQLYSWGKASCLGHQLVER 833
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+ +P + L A+G +A++ G++ WG
Sbjct: 834 NVQGCSVPRLITSLQHKRIVDVAVGVTHCLALSSAGEIFGWG 875
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 128/284 (45%), Gaps = 55/284 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD RLG G SR P + + +K++ CG +++ +T G +Y G ++G+
Sbjct: 665 WGTGDNRRLGHGDCHSRELPTKIESLVRR-VKSVYCGCSYSAAITLRGNLYTWGRGNYGR 723
Query: 103 L--GISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGL 157
L GIS++ P + LK +VV ++ +G H+ +T +G +Y WG G+LG
Sbjct: 724 LGHGISDD---QCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGN 780
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESS 216
+ + P+ +ECL + ++ G + S+A+TG G++ SWG LGH E +
Sbjct: 781 ASCNSSLQPL--LIECLPRV--QRVFAGSQFSLALTGEGQLYSWGKASC--LGHQLVERN 834
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ G PRLI L+ ++ A G H C+
Sbjct: 835 VQGC------SVPRLITSLQHKRIVDVAVGVTH--CL----------------------- 863
Query: 277 HARRPSLISGGELYTWGSNENGCLGIGSI---DVLHSPERVQGP 317
+L S GE++ WG N+N + S+ +L P V P
Sbjct: 864 -----ALSSAGEIFGWGRNDNQQICPASVCSEPLLRQPILVTLP 902
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 126/335 (37%), Gaps = 105/335 (31%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG------------------ 185
+Y WG N GQLG G + ++ I PT E LS + Q A G
Sbjct: 4072 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4129
Query: 186 --------------------------FEQSVAVTGGGK----------VLSWGAGGSGRL 209
F + VAV GGK V +WG G G+L
Sbjct: 4130 GSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKL 4189
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG L + R P+L++ L G+ V A G HSA I +G V +G +
Sbjct: 4190 GHGNR---LSYDR------PKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4240
Query: 270 MLFQEGNHARRPSLISG------------------------GELYTWGSNENGCLGIGSI 305
+ + RP L+ +++WG + G LG G
Sbjct: 4241 LGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4300
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 364
D P +++ + V +V CG + + A+++ G + TWG G H +L
Sbjct: 4301 DGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFH------------RL 4347
Query: 365 GHGNDVDYI-HPTIVNFGENVKALQVSCGFNHTGA 398
GHG+ VD++ P V + K + ++ G H A
Sbjct: 4348 GHGS-VDHVRRPKKVAALQGKKIISIATGSLHCVA 4381
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 15/104 (14%)
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
Y+WG+ +N LG G P +++ V V CG ++AAI+ G + TWG G
Sbjct: 663 YSWGTGDNRRLGHGDCHSRELPTKIESLVRR--VKSVYCGCSYSAAITLRGNLYTWGRGN 720
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
G+LGHG D PT+V ++ + + V+ G
Sbjct: 721 Y------------GRLGHGISDDQCLPTMVMALKDHQVVDVALG 752
>gi|118084855|ref|XP_417055.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Gallus gallus]
Length = 566
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 138/303 (45%), Gaps = 49/303 (16%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG G ++S P + + L+ G G H + TE G VY G N + QLG +
Sbjct: 92 GCLGTGDIQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLG-NG 150
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P ++S + K+V++++ G HHS +T DGE+Y WG N++GQ+G G A +
Sbjct: 151 TTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ-- 208
Query: 166 PIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 209 PIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGS---------SG 259
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
++ TP I L+G++V+ A G H+ + + G++
Sbjct: 260 NQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQI------------------------- 294
Query: 285 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKIL 342
Y WG+N G LG G+ P V + V+ +C HT+A G++
Sbjct: 295 -----YAWGANSYGQLGTGNKSNQSYPTTVTVD-KDRVVEIAACHSAHTSAAKTQSGQVY 348
Query: 343 TWG 345
WG
Sbjct: 349 MWG 351
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P V + + +ACG H++ LT G VY G N+ G
Sbjct: 139 WGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSG 198
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++ K VV I+ G S A+ +GE+Y+WG N NGQLGLG
Sbjct: 199 QVGSGSTANQPI-PRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGS 257
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P ++ L GI ++ A G ++ +T G++ +WGA G+LG G +S
Sbjct: 258 SGNQ--PTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKS---- 311
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ P + + V+IAA H SA ++G+VY++G
Sbjct: 312 -----NQSYPTTVTVDKDRVVEIAACHSAHTSAAKTQSGQVYMWG 351
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 145/348 (41%), Gaps = 62/348 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L++TE V+ G+N G LG + I ++E
Sbjct: 46 KWPIFSLCSQEELKLIRQACVFGSAGNEVLYVTENDEVFVLGMNCSGCLGTGD-IQSTIE 104
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE+Y WG N+ QLG G ++P
Sbjct: 105 PKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTN 164
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
L + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 165 -LVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGS---------TANQPIPRRV 214
Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYT 291
KV + A G + S + ENG VY+
Sbjct: 215 TSCLQNKVVVNIACGQMCSMAVVENGEVYV------------------------------ 244
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSH 350
WG N NG LG+GS +P R+ V +V+CG HT ++ EG+I WG
Sbjct: 245 WGYNGNGQLGLGSSGNQPTPCRI-AALQGIRVQRVACGCAHTLVLTDEGQIYAWG----- 298
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 299 -------ANSYGQLGTGNKSNQSYPTTVTVDKDRVVEIAACHSAHTSA 339
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 244 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYG 303
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K VV+I+ + H S+A T G++YMWG+ GQ
Sbjct: 304 QLGTGNKSNQSY-PTTVTVDKDRVVEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ----- 356
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 357 --SVVLPHLTHFACTDDVF 373
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 94/235 (40%), Gaps = 46/235 (19%)
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHS 250
VT +V G SG LG G ++ST E P+ + L G K+ + G H
Sbjct: 77 VTENDEVFVLGMNCSGCLGTGD-------IQSTIE--PKRLDSLCGKKIACLSYGSGPHV 127
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPS-----------------------LISGG 287
E G VY +G A ++ NH P L S G
Sbjct: 128 VLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDG 187
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGW 346
E+YTWG N +G +G GS P RV V ++CG + A+ E G++ WG+
Sbjct: 188 EVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGY 247
Query: 347 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G+ GQLG G+ + P + + ++ +V+CG HT L +
Sbjct: 248 NGN------------GQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTD 290
>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
Length = 3645
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 138/301 (45%), Gaps = 46/301 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T +G +Y G +G+
Sbjct: 2874 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGR 2933
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 2934 LGHGDSED-QLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG- 2991
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 2992 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3048
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 3049 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 3079
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ +++V+CG HT A S
Sbjct: 3080 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACGSAHTLAWSTS 3130
Query: 340 K 340
K
Sbjct: 3131 K 3131
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 139/303 (45%), Gaps = 44/303 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y+ GL ++G+
Sbjct: 1880 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 1939
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
LG +N L L VVQ++ G + A+T +G ++ WG G+LG G
Sbjct: 1940 LGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRG-- 1997
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 1998 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV--- 2054
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P++++ L G K+ A G LH + E G+V
Sbjct: 2055 ------RKPQMVEGLRGKKIVHVAVGALHCLAVTETGQV--------------------- 2087
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
+ WG N++G G G+ V P VQG + +V+CG H+ A +
Sbjct: 2088 ---------FAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTVD 2137
Query: 341 ILT 343
+ T
Sbjct: 2138 VTT 2140
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 162/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +IS L VV+ + +G H
Sbjct: 1808 GGSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRH 1867
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 1868 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 1925
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ SWG G GRLGHG +T++ P+L+K L G +V A G +
Sbjct: 1926 SGELYSWGLGEYGRLGHGD---------NTTQLRPKLVKVLLGHRVVQVACGSRDAQTLA 1976
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 1977 LTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2036
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG G+ + P+ V+G + V+ G H A++E G++ WG
Sbjct: 2037 TWGKGDYFRLGHGTDVHVRKPQMVEG-LRGKKIVHVAVGALHCLAVTETGQVFAWG---- 2091
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 2092 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2132
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 157/350 (44%), Gaps = 56/350 (16%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYS----LEPLRISGLKKEVVQISTGYH 133
GG TLF +T G +YATG G+LGI S LE ++ ++K V +++G
Sbjct: 2803 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRK--VAVNSGGK 2860
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H A++ +GELY WG+ +G+LG G ++ P +E L G+ A G S +T
Sbjct: 2861 HCLALSSEGELYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIAAGGAHSACIT 2918
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSA 251
G++ +WG G GRLGHG S + P+L++ L+G +V A +G +
Sbjct: 2919 ASGELYTWGKGRYGRLGHGD---------SEDQLKPKLVEALQGHRVIDVACGSGDAQTL 2969
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRP----------------------SLISGGEL 289
C+ ++ V+ +GD K+ + + P +L G +
Sbjct: 2970 CLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 3029
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGG 348
YTWG + LG GS D + P +VQG V ++ G H +E G++ TW
Sbjct: 3030 YTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW---- 3084
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + GQLG G P +V + K +V+CG HT A
Sbjct: 3085 --------GDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 3126
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 1762 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTAE 1819
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 1820 GKVYACGEATNGRLGLGLSSGTIPI--------PRQISALSNYVVKKVA---VHSG---- 1864
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 1865 -------------------GRHAM--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 1903
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AAI S G++ +WG G G+LGHG++ +
Sbjct: 1904 A-LKTKRIRDIACGSSHSAAITSSGELYSWGLG------------EYGRLGHGDNTTQLR 1950
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 1951 PKLVKVLLGHRVVQVACGSRDAQTL 1975
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 112/252 (44%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 2763 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYAT 2820
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V F+ ++ G+ +
Sbjct: 2821 GYGAGGRLGIGGTESV---------STPTLLESIQHV--------FIRKVAVNSGGKHCL 2863
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GELY+WG E+G LG G+ P ++
Sbjct: 2864 --------------------ALSSEGELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVE 2903
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD ++ G H+A I+ G++ TWG G G+LGHG+ D + P +V
Sbjct: 2904 VVD-IAAGGAHSACITASGELYTWGKG------------RYGRLGHGDSEDQLKPKLVEA 2950
Query: 381 GENVKALQVSCG 392
+ + + V+CG
Sbjct: 2951 LQGHRVIDVACG 2962
>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
(Silurana) tropicalis]
Length = 1029
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 170/368 (46%), Gaps = 78/368 (21%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+L L E + + + ++ ++CG HTL+L E G + + G N +
Sbjct: 4 WGDNCFGQLALLQGEKEVVHFKENDYFQSQECVQKVSCGEKHTLYLLEDGTLLSCGQNPY 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG N S+E +IS L+ + +V IS G +HS A++ +G +Y WG S GQLG G
Sbjct: 64 GQLGRKSN-NSSIE--QISSLEAQTIVDISCGTNHSVAVSDEGSIYSWGDGSEGQLGTGN 120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+++ P K+ L Q + G S+A++ G+V SWG G+LG G S I+
Sbjct: 121 LSSRNF-TPKKITGLFNTKIIQISCGNFHSLALSEDGRVFSWGQNKCGQLGLG--SQII- 176
Query: 220 FLRSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
++ TP+L+K L+G+ V++ A G +
Sbjct: 177 -----NQATPQLVKSLKGIPLVQVTAGG-------------------------------S 200
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ--------VSCGW 330
+ +L G ++ WG N G LG S + ++G F V+ +SCG
Sbjct: 201 QSFALSMSGTVFAWGKNNAGQLGFKS-------DPMKGTFKPHAVNSLRNLGVAYISCGE 253
Query: 331 KHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGH--GNDVDYIHPTIVNFGENVKALQ 388
+HTA +S+ GS TF +D H GQLG GN + I ++ V Q
Sbjct: 254 EHTAVLSK--------DGSVYTFGDDTH---GQLGQNSGNQTS-VPQKIEDYAGQVS--Q 299
Query: 389 VSCGFNHT 396
V+CG HT
Sbjct: 300 VACGRYHT 307
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 126/316 (39%), Gaps = 65/316 (20%)
Query: 92 VYATGLNDFGQLGI----SENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYM 146
+Y G N FGQL + E + + S +E VQ +S G H+ + DG L
Sbjct: 1 MYCWGDNCFGQLALLQGEKEVVHFKENDYFQS---QECVQKVSCGEKHTLYLLEDGTLLS 57
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
G+N GQLG + + ++ L + G SVAV+ G + SWG G
Sbjct: 58 CGQNPYGQLGRKSNNSSI----EQISSLEAQTIVDISCGTNHSVAVSDEGSIYSWGDGSE 113
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG G SS +TP+ I L K+ + G HS + E+GRV+
Sbjct: 114 GQLGTGNLSS--------RNFTPKKITGLFNTKIIQISCGNFHSLALSEDGRVF------ 159
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
+WG N+ G LG+GS + + ++ P+ QV
Sbjct: 160 ------------------------SWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQV 195
Query: 327 SCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD--YIHPTIVNFGEN 383
+ G + A+S G + WG ++ GQLG +D P VN N
Sbjct: 196 TAGGSQSFALSMSGTVFAWG------------KNNAGQLGFKSDPMKGTFKPHAVNSLRN 243
Query: 384 VKALQVSCGFNHTGAL 399
+ +SCG HT L
Sbjct: 244 LGVAYISCGEEHTAVL 259
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 59/121 (48%), Gaps = 17/121 (14%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKI 341
L+ G L + G N G LG S + S E++ +++ VD +SCG H+ A+S EG I
Sbjct: 49 LLEDGTLLSCGQNPYGQLGRKSNN--SSIEQISSLEAQTIVD-ISCGTNHSVAVSDEGSI 105
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGN-DVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
+WG G S GQLG GN P + N K +Q+SCG H+ AL
Sbjct: 106 YSWGDG------------SEGQLGTGNLSSRNFTPKKITGLFNTKIIQISCGNFHSLALS 153
Query: 401 E 401
E
Sbjct: 154 E 154
>gi|218782845|ref|YP_002434163.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218764229|gb|ACL06695.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 437
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 149/342 (43%), Gaps = 62/342 (18%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI---SGLKKE-VVQISTGY 132
A GG H+L + G V+A G N GQLGI N SL P+R+ SG V++++ G
Sbjct: 61 AGGGYHSLVVKNDGTVWAWGDNSSGQLGIGTNKA-SLSPVRVMHKSGAPLNGVLKVAAGE 119
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPT---KVECLSGIFTKQAALGFEQS 189
HS A+T GE++ WG NS GQLG G + P+ + L I AA G + S
Sbjct: 120 RHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVG--AACGGKHS 177
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+AV G V +WG+ G++G G + R R K L GVK AAGF H
Sbjct: 178 LAVASDGTVWAWGSNSDGQIGDGTLKN-----RQNPRQVMRFGKPLAGVKA--VAAGFAH 230
Query: 250 SACIDENGRVYIFG-------------------------DRAVDKMLFQEGNHARRPSLI 284
S + +G V+ +G DR +D ++ A +L
Sbjct: 231 SLALSVDGTVWAWGDNEFGQLGDCSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAFSLALT 290
Query: 285 SGGELYTWGSNENGCLGIGS-----IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SE 338
GE++ WG+N G LG+G D L P R V ++ +H+ A+ ++
Sbjct: 291 RDGEVWAWGNNGVGQLGMGPHNGFVRDPL--PVRAANGVPLKGVRAITANGRHSLALMND 348
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
G +L WG G GQLG G HPT+ +
Sbjct: 349 GSVLAWGAGDR------------GQLGQGAQNHEDHPTLASL 378
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 112/231 (48%), Gaps = 23/231 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKH--SLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ G++G G+L++R P F K +KA+A G AH+L L+ G V+A G N+F
Sbjct: 189 WGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFAHSLALSVDGTVWAWGDNEF 248
Query: 101 GQLGISENIGYSLEPLRISGLKK---EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQLG + + + + VV I+ G S A+T DGE++ WG N GQLG+
Sbjct: 249 GQLGDCSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAFSLALTRDGEVWAWGNNGVGQLGM 308
Query: 158 GKKAAKV-IPIPTKVE---CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
G V P+P + L G+ A S+A+ G VL+WGAG G+LG G
Sbjct: 309 GPHNGFVRDPLPVRAANGVPLKGVRAITA--NGRHSLALMNDGSVLAWGAGDRGQLGQGA 366
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
++ E P L V AAG HS + ENG V +GD
Sbjct: 367 QN---------HEDHPTLASLHS---VICLAAGRYHSLAVAENGAVLAWGD 405
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 128/296 (43%), Gaps = 44/296 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL---ACGGAHTLFLTETGCVYATGLND 99
WG+ G+LG G R PV + L+ + ACGG H+L + G V+A G N
Sbjct: 134 WGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAACGGKHSLAVASDGTVWAWGSNS 193
Query: 100 FGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQ+G +N + +R V ++ G+ HS A++VDG ++ WG N GQLG
Sbjct: 194 DGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFAHSLALSVDGTVWAWGDNEFGQLGD 253
Query: 158 GKKAAKVIPIPTKVEC---LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
+ P+ L + A F S+A+T G+V +WG G G+LG G
Sbjct: 254 CSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAF--SLALTRDGEVWAWGNNGVGQLGMGPH 311
Query: 215 SSILGFLRSTSEYTPRLIKELEGVK---VKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
+ GF+R P ++ GV V+ A HS + +G V +G A D+
Sbjct: 312 N---GFVRD-----PLPVRAANGVPLKGVRAITANGRHSLALMNDGSVLAWG--AGDRGQ 361
Query: 272 FQEG--NHARRPSLIS-------------------GGELYTWGSNENGCLGIGSID 306
+G NH P+L S G + WG N+ G LGIG D
Sbjct: 362 LGQGAQNHEDHPTLASLHSVICLAAGRYHSLAVAENGAVLAWGDNQKGQLGIGKAD 417
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLK---ALACGGAHTLFLTETGCVYATGLN 98
WGN G+LG+G R P+ A LK A+ G H+L L G V A G
Sbjct: 298 WGNNGVGQLGMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLALMNDGSVLAWGAG 357
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
D GQLG + P S V+ ++ G +HS A+ +G + WG N GQLG+G
Sbjct: 358 DRGQLGQGAQ-NHEDHPTLAS--LHSVICLAAGRYHSLAVAENGAVLAWGDNQKGQLGIG 414
Query: 159 KKAAKVIPIPTKV 171
K +P K
Sbjct: 415 KADKNFHALPEKT 427
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 44/189 (23%)
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP-------------------- 281
IAA G HS + +G V+ +GD + ++ + P
Sbjct: 59 IAAGGGYHSLVVKNDGTVWAWGDNSSGQLGIGTNKASLSPVRVMHKSGAPLNGVLKVAAG 118
Query: 282 -----SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV---SCGWKHT 333
+L + GE++TWG N G LG G SP +V+ +P++ + +CG KH+
Sbjct: 119 ERHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRH-IRTNPLENIVGAACGGKHS 177
Query: 334 AAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP-TIVNFGENVKALQ-VS 390
A+ S+G + W WG +S GQ+G G + +P ++ FG+ + ++ V+
Sbjct: 178 LAVASDGTV--WAWGS----------NSDGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVA 225
Query: 391 CGFNHTGAL 399
GF H+ AL
Sbjct: 226 AGFAHSLAL 234
>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu rubripes]
Length = 4822
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 138/301 (45%), Gaps = 46/301 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T +G ++ G +G+
Sbjct: 4051 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGR 4110
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 4111 LGHGDSED-QLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG- 4168
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ IP K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4169 -GSDGCKIPMKIDSLTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4225
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4226 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4256
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ +++V+CG HT A S
Sbjct: 4257 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACGSAHTLAWSTS 4307
Query: 340 K 340
K
Sbjct: 4308 K 4308
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 139/303 (45%), Gaps = 44/303 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y+ GL ++G+
Sbjct: 3057 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3116
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
LG +N L L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3117 LGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-- 3174
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3175 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV--- 3231
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P++++ L G K+ A G LH + + G+VY
Sbjct: 3232 ------RKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVY-------------------- 3265
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
WG N++G G G+ V P VQG + +V+CG H+ A +
Sbjct: 3266 ----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTVD 3314
Query: 341 ILT 343
+ T
Sbjct: 3315 VTT 3317
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 156/337 (46%), Gaps = 50/337 (14%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2947 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEAT 3006
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + IPIP ++ LS K+ A+ G ++A+T GKV SWG G G+L
Sbjct: 3007 NGRLGLGLSSG-TIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3065
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF------- 262
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +
Sbjct: 3066 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3116
Query: 263 ---GDRAVD------KMLFQE--------GNHARRPSLISGGELYTWGSNENGCLGIGSI 305
GD A K+L A+ +L G +++WG + G LG G
Sbjct: 3117 LGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3176
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 364
+ + P+ ++ + V Q+ CG + + A+++ G + TWG G +L
Sbjct: 3177 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3223
Query: 365 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GHG DV P +V K + V+ G H A+ +
Sbjct: 3224 GHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTD 3260
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 156/350 (44%), Gaps = 56/350 (16%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYS----LEPLRISGLKKEVVQISTGYH 133
GG TLF +T G +YATG G+LGI S LE ++ ++K V +++G
Sbjct: 3980 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRK--VAVNSGGK 4037
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H A++ +GE+Y WG+ +G+LG G ++ P +E L G+ A G S +T
Sbjct: 4038 HCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIAAGGAHSACIT 4095
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSA 251
G++ +WG G GRLGHG S + P+L+ L+G +V A +G +
Sbjct: 4096 ASGELFTWGKGRYGRLGHGD---------SEDQLKPKLVDALQGHRVIDVACGSGDAQTL 4146
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRP----------------------SLISGGEL 289
C+ ++ V+ +GD K+ + + P +L G +
Sbjct: 4147 CLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGSQFSVALTKSGAV 4206
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGG 348
YTWG + LG GS D + P +VQG V ++ G H +E G++ TW
Sbjct: 4207 YTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW---- 4261
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + GQLG G P +V + K +V+CG HT A
Sbjct: 4262 --------GDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4303
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 121/267 (45%), Gaps = 43/267 (16%)
Query: 62 PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
P++ + + LA G H L L+ G V++ G D G+LG + Y EP I+
Sbjct: 470 PMLIHSLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDAT-YLEEPTMIA 528
Query: 120 GLK-----KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
K VV I+ G +S+ IT+DGELY WG+ + G+LG G + P+ V L
Sbjct: 529 AFNGKQAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPM--LVTAL 586
Query: 175 SGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
G+ A G Q++AVT G+V SWG G G+LG G S TP+L+
Sbjct: 587 KGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLV 637
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI-------- 284
++L+ + + G S + ++G+VY +G ++ H R P L+
Sbjct: 638 EKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKV 697
Query: 285 --------------SGGELYTWGSNEN 297
GE+++WGSN+
Sbjct: 698 VDVAVGSTHCLALTDDGEVHSWGSNDK 724
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 122/252 (48%), Gaps = 22/252 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + +AF KH + +ACG ++ +T G +Y G
Sbjct: 505 WGCGDGGRLGHGDATYLEEPTMIAAFNGKQAGKHVVH-IACGSTYSAVITIDGELYTWGR 563
Query: 98 NDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
++G+L G SE+ + + GLK V +G + A+T +G+++ WG G+L
Sbjct: 564 GNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKL 623
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + P VE L + + G + SVA+T G+V +WG G + RLGHG +
Sbjct: 624 GRG--GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDE 681
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML-FQE 274
+ P+L+ L+G KV A G H + ++G V+ +G DK+ F
Sbjct: 682 HV---------RFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSN--DKLQHFDT 730
Query: 275 GNHARRPSLISG 286
++ ++P + G
Sbjct: 731 LSNKKQPKALPG 742
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 149/351 (42%), Gaps = 77/351 (21%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + + + C L L+ +G VY +L P+ I L
Sbjct: 428 PIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYTQNYK-----------STTLAPMLIHSL 476
Query: 122 K-KEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+++V+++ H A++ +GE++ WG G+LG G A + PT + +G
Sbjct: 477 SSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGD--ATYLEEPTMIAAFNG-- 532
Query: 179 TKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
KQA A G S +T G++ +WG G GRLGHG S + TP L
Sbjct: 533 -KQAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGS---------SEDQTTPML 582
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYT 291
+ L+G+KV A G GD A+ ++ G++++
Sbjct: 583 VTALKGLKVVDVACGS---------------GD-------------AQTLAVTENGQVWS 614
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSH 350
WG + G LG G D +P+ V+ + + +V CG + + A++ +G++ TWG G +
Sbjct: 615 WGDGDYGKLGRGGSDGCKTPKLVEK-LQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQ 673
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHG D P +++ + K + V+ G H AL +
Sbjct: 674 ------------RLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTD 712
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 114/258 (44%), Gaps = 52/258 (20%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2939 SAGTIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2996
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GK+ + G +GRLG G S + PR I L VK A +HS
Sbjct: 2997 GKIYACGEATNGRLGLGLSSGTIPI--------PRQITALSNYVVKKVA---VHSG---- 3041
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3042 -------------------GRHAM--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3080
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AAI S G++ +WG G G+LGHG++ +
Sbjct: 3081 A-LKTKRIRDIACGSSHSAAITSSGELYSWGLG------------EYGRLGHGDNATQLR 3127
Query: 375 PTIVNFGENVKALQVSCG 392
P +V + +QV+CG
Sbjct: 3128 PKLVKVLLGHRVIQVACG 3145
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 113/252 (44%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3940 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYAT 3997
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V F+ ++ G+ +
Sbjct: 3998 GYGAGGRLGIGGTESV---------STPTLLESIQHV--------FIRKVAVNSGGKHCL 4040
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4041 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVE 4080
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD ++ G H+A I+ G++ TWG G G+LGHG+ D + P +V+
Sbjct: 4081 VVD-IAAGGAHSACITASGELFTWGKG------------RYGRLGHGDSEDQLKPKLVDA 4127
Query: 381 GENVKALQVSCG 392
+ + + V+CG
Sbjct: 4128 LQGHRVIDVACG 4139
>gi|8131932|gb|AAF73142.1|AF148799_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 416
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 161/358 (44%), Gaps = 57/358 (15%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL TE G VYA G N+ G
Sbjct: 58 MFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEG 117
Query: 102 QLGISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + S + ++++ Q+S G + S+A+T DGEL+MWG NS GQ+GL
Sbjct: 118 QLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENV 177
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+P V G + G+ S VT G++ ++G G+LG + +
Sbjct: 178 TNVCVPQQVTV----GKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLV--- 230
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ P+ + + G V++A G G + ++AV
Sbjct: 231 ----NHRMPQPVPGIPGKVVQVACGG----------GHTVVLTEKAV------------- 263
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-G 339
YT+G + G LG+G+ S + + + ++CG HTA I++ G
Sbjct: 264 ---------YTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMG 314
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCGFNHT 396
+ T+G G HG LG N + PT+ NF + L VSCG HT
Sbjct: 315 LMYTFG-DGRHGKLG---------LGLENSTNQFIPTLCSNFLRFIVQL-VSCGGCHT 361
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 146/325 (44%), Gaps = 52/325 (16%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + +S G H++ +T + +LYM+G N+ GQLGLG
Sbjct: 17 FGKTQFAENI-----PSKFWFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGS 71
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K+ + PT V+ L K AA G ++ T GGKV + G G+LG G
Sbjct: 72 KST--VSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERST 129
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F + + R IK+L +AG SA + E+G ++++GD + ++ + +
Sbjct: 130 FHLISFFTSQRKIKQL--------SAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVC 181
Query: 280 RPSLI--------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
P + + G+LYT+G E G LG+ + +++ R+ P
Sbjct: 182 VPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVN--HRMPQPVP 239
Query: 320 ESP--VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPT 376
P V QV+CG HT ++E + T+G G GQLG G + + P
Sbjct: 240 GIPGKVVQVACGGGHTVVLTEKAVYTFGLG------------QFGQLGLGTFLFETSVPK 287
Query: 377 IVNFGENVKALQVSCGFNHTGALLE 401
+ ++ K ++CG NHT + +
Sbjct: 288 AIEHIKDQKISFIACGENHTALITD 312
>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 393
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 148/365 (40%), Gaps = 65/365 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LG+G+ E + V A E +S++++ G ++L + + G ++ G N G
Sbjct: 10 WGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGT 69
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
LG P R+ L ++ Q + G H A+ G Y WG N GQ G
Sbjct: 70 LGHPPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLK 129
Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
+G+ + I IP + C + +Q A G SV +T G V +WG +
Sbjct: 130 DEMGRPVRRDIVIPKR--CAPKLTVRQVAAGGTHSVVLTREGHVWTWG-----------Q 176
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
G ++ + P ++ LE V I A G H+ ++E+GR
Sbjct: 177 PWPPGDIKQI--FVPVRVQGLE--NVSIIAVGAFHNLALEEDGR---------------- 216
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
L WG+NE G LG G P V G + VD + GW TA
Sbjct: 217 --------------LLAWGNNEYGQLGTGDTQPTSHPVPVHGLDDLTLVDIAAGGWHSTA 262
Query: 335 AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
+G++ WG G HG G + + P VN +QVSCG
Sbjct: 263 LTDKGEVYGWG-RGEHGRLG---------FGDNDKSSKMVPQKVNLLAEEDIIQVSCGGT 312
Query: 395 HTGAL 399
H+ AL
Sbjct: 313 HSVAL 317
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 134/312 (42%), Gaps = 45/312 (14%)
Query: 40 AALWGNGDYGRLGLGSLESRW-RPVVCSAF------EKHSLKALACGGAHTLFLTETGCV 92
A WG +YG+ G L+ RPV K +++ +A GG H++ LT G V
Sbjct: 112 AYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHV 171
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
+ +GQ +I P+R+ GL+ V I+ G H+ A+ DG L WG N
Sbjct: 172 WT-----WGQPWPPGDIKQIFVPVRVQGLEN-VSIIAVGAFHNLALEEDGRLLAWGNNEY 225
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG G P+P V L + A G S A+T G+V WG G GRLG G
Sbjct: 226 GQLGTGDTQPTSHPVP--VHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFG 283
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
+S+ P+ + L + + G HS + +GR++ FG
Sbjct: 284 DNDK-------SSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFG--------- 327
Query: 273 QEGNHARRPSLISGGELYTWGSNENGCLGI----GSIDVLHSPERVQGPFSESPVDQVSC 328
G+H R + G T G + I GS + H+ E +G +S ++C
Sbjct: 328 -RGDHGR----LGYGRKVTTGQPLELPIMIPPPEGSFN--HADEEEEGKWS---AKWIAC 377
Query: 329 GWKHTAAISEGK 340
G +HT AI E K
Sbjct: 378 GGRHTLAIVEWK 389
>gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
vinifera]
Length = 1107
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 170/370 (45%), Gaps = 72/370 (19%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQ-IS 129
++ +ACGG H +T+ G +++ G G+L G+ ++ L P I L ++ ++
Sbjct: 314 VQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDV---LHPKLIDSLSNTNIELVA 370
Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
G +H+ A+T+ G+LY WG + G LG G + + +P +V L GI + G
Sbjct: 371 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHW--VPKRVNGPLEGIHVSSISCGP 428
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+ VT G++ ++G G G LGHG S+ PR ++ L+G + I+A G
Sbjct: 429 WHTAVVTSSGQLFTFGDGTFGVLGHGDTKSV---------SKPREVESLKGHRTVISACG 479
Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGN------------------ 276
H+A + E +G+++ +GD DK G+
Sbjct: 480 VWHTAAVVEIMVGNPSSSNCSSGKLFTWGD--GDKGRLGHGDKEAKLVPTCVAALVDPNF 537
Query: 277 ------HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 330
H+ +L + G +YT GS G LG D P RV+G ++S V++++CG
Sbjct: 538 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPTRVEGKLAKSFVEEIACGA 596
Query: 331 KHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 389
H A + S ++ TWG G + G+LGHG+ D PT+V ++ + +
Sbjct: 597 YHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRNSPTLVEALKDKQVKSI 644
Query: 390 SCGFNHTGAL 399
+CG N T +
Sbjct: 645 ACGTNFTATI 654
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 128/311 (41%), Gaps = 61/311 (19%)
Query: 43 WGNGDY--GRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+G Y G LG G+ S W P V E + +++CG HT +T +G ++ G
Sbjct: 388 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGT 447
Query: 100 FGQLGISENIGYSLEPLRISGLK--------------KEVVQISTGYHHSSAITVDGELY 145
FG LG + S +P + LK VV+I G + SS+ G+L+
Sbjct: 448 FGVLGHGDTKSVS-KPREVESLKGHRTVISACGVWHTAAVVEIMVG-NPSSSNCSSGKLF 505
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
WG G+LG G K AK++P T V L + A G +VA+T G V + G+
Sbjct: 506 TWGDGDKGRLGHGDKEAKLVP--TCVAALVDPNFCRVACGHSLTVALTTSGHVYTMGSPV 563
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LG+ Q L R+ +L V+ A G H A
Sbjct: 564 YGQLGNPQADGKL---------PTRVEGKLAKSFVEEIACGAYHVAV------------- 601
Query: 266 AVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 325
L S E+YTWG NG LG G D +SP V+ + V
Sbjct: 602 -----------------LTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEA-LKDKQVKS 643
Query: 326 VSCGWKHTAAI 336
++CG TA I
Sbjct: 644 IACGTNFTATI 654
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 100/238 (42%), Gaps = 50/238 (21%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G + VT G++ SWG GRLGHG +S +L
Sbjct: 302 LPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVL-------- 353
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
P+LI L +++ A G H+ + +G +Y +GD + L GN
Sbjct: 354 -HPKLIDSLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN---------- 402
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 345
E+ W P+RV GP V +SCG HTA + S G++ T+G
Sbjct: 403 -EVSHW-----------------VPKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFG 444
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
GTF G LGHG+ P V + + + +CG HT A++E +
Sbjct: 445 ----DGTF--------GVLGHGDTKSVSKPREVESLKGHRTVISACGVWHTAAVVEIM 490
>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
Length = 1058
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 163/365 (44%), Gaps = 54/365 (14%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+LGLG +E P +++ +ACG HTLFLT TG VYA G ND+
Sbjct: 10 WGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDY 69
Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + P I L+ V +QIS G HS A++ G++ WG N GQLG
Sbjct: 70 SQLGHDLP---TKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHAT 126
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +++ +P V L Q A G S+A+T G++ SWG+ G+LG + +
Sbjct: 127 E-KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL-- 183
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHA 278
T P + L G+ + A G HS I ++G V+ +G ++ L E N A
Sbjct: 184 ----THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRA 239
Query: 279 RRPSLIS-----------GGELYTWGSNENGCL------------GIGSIDVLHSPERVQ 315
L + G E + +NE G G S ++L R+
Sbjct: 240 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEML---PRMV 296
Query: 316 GPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
S + QV+CG +HT A+ S GK+ +G G S GQLG + +
Sbjct: 297 MELMGSTITQVACGNRHTLALVPSRGKVYAFGLG------------SSGQLGTRSTKSLM 344
Query: 374 HPTIV 378
P +V
Sbjct: 345 LPQVV 349
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 121/276 (43%), Gaps = 49/276 (17%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P ++ +Q A G ++ +T GKV + G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ +LGH + P+LI EL+ + + G HS + + G+V +
Sbjct: 66 SNDYSQLGHDLPTK-----------RPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSW 114
Query: 263 GDR-------AVDKMLFQEGNHARR----------------PSLISGGELYTWGSNENGC 299
GD A +K + Q R+ +L S GELY+WGSN G
Sbjct: 115 GDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQ 174
Query: 300 LGIGSI-DVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 356
LG+ S D+ H P R+ P+ ++CG H+ IS+ + +GW
Sbjct: 175 LGVNSPNDLTHCNYPLRLTTLLG-IPLAAIACGGNHSFLISKSGAV-FGW---------- 222
Query: 357 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
G ++ GQLG ++ + +PT + + V+CG
Sbjct: 223 GRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACG 258
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 83/210 (39%), Gaps = 54/210 (25%)
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+ G ++ WG+ G+LG LG + TPR I V+ A G H+
Sbjct: 1 MASGKELYCWGSTSHGQLG-------LGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTL 53
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSP 311
+ G+VY G ++ +RP LI + Y
Sbjct: 54 FLTATGKVYACGSNDYSQL--GHDLPTKRPQLIPELQDYV-------------------- 91
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+ Q+SCG +H+ A+S+ G++L+WG + GQLGH +
Sbjct: 92 -----------IIQISCGSRHSLALSDWGQVLSWG------------DNDCGQLGHATEK 128
Query: 371 DYIH-PTIVNFGENVKALQVSCGFNHTGAL 399
+ + P +V + +Q++CG NH+ AL
Sbjct: 129 EIVQLPKVVRQLVSKTVVQIACGNNHSLAL 158
>gi|134025900|gb|AAI34575.1| RPGR protein [Bos taurus]
Length = 620
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 138/260 (53%), Gaps = 21/260 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K+DI + G I++ + F ++G+ ++G+LGLGS + +P A +
Sbjct: 73 SKFWFKRDIPISLSCGDEHTAITTGNNKLF--MFGSNNWGQLGLGSKATVNKPTCIKALK 130
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI---SENIGYSLEPLRISGLKKEVV 126
+K +ACG HTL LT G VYATG N+ GQLG+ E + L S K +
Sbjct: 131 PEKVKFVACGRNHTLILTGGGQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHK--IK 188
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAAL 184
Q+S G + S+A+T +GELY +G+ +G+LGL K +P + + GI K Q A
Sbjct: 189 QLSAGSNTSAALTAEGELYTFGEPESGKLGLPPKLLVNHKVP---QLVPGISEKVIQVAC 245
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G +V +T V ++G G G+LG G F TSE P++I+ ++ K+
Sbjct: 246 GGGHTVVLTEKA-VYTFGLGQFGQLGLGT------FTFETSE--PKVIESVKDKKISHVC 296
Query: 245 AGFLHSACIDENGRVYIFGD 264
G H+A I E+G +Y FGD
Sbjct: 297 CGENHTALITESGLLYTFGD 316
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 147/341 (43%), Gaps = 77/341 (22%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI 128
E+ + + G + ++G V+ FG+ +EN+ P + + + +
Sbjct: 36 EEQAFHSAITMGEPDKMVPDSGAVFT-----FGKTKFAENM-----PSKFWFKRDIPISL 85
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G H++ T + +L+M+G N+ GQLGLG KA + PT ++ L K A G
Sbjct: 86 SCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKA--TVNKPTCIKALKPEKVKFVACGRNH 143
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKVKIA 243
++ +TGGG+V + G G+LG G ++ F TS++ K+K
Sbjct: 144 TLILTGGGQVYATGGNNEGQLGLGDTDERSAFHLISFF--TSQH-----------KIKQL 190
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+AG SA +L + GELYT+G E+G LG+
Sbjct: 191 SAGSNTSA------------------------------ALTAEGELYTFGEPESGKLGLP 220
Query: 304 S-IDVLHS-PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSG 361
+ V H P+ V G SE V QV+CG HT ++E + T+G G
Sbjct: 221 PKLLVNHKVPQLVPG-ISEK-VIQVACGGGHTVVLTEKAVYTFGLG------------QF 266
Query: 362 GQLGHGN-DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GQLG G + P ++ ++ K V CG NHT + E
Sbjct: 267 GQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALITE 307
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G+G +G+LGLG + +++ P +CS+F K+ + +ACGG H L V+AT
Sbjct: 314 FGDGRHGKLGLGMENFTNQFVPTLCSSFLKYIVHLVACGGCHML-------VFATPRLGM 366
Query: 101 GQLGISENIGYSLEPLRI 118
+ S+ I YS P I
Sbjct: 367 AEDIESDEINYSYLPSAI 384
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
L + +G G +G+LGLG+ P V + + + + CG HT +TE+G +Y
Sbjct: 253 LTEKAVYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALITESGLLY 312
Query: 94 ATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQI 128
G G+LG+ EN P S K +V +
Sbjct: 313 TFGDGRHGKLGLGMENFTNQFVPTLCSSFLKYIVHL 348
>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus (Silurana) tropicalis]
gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
Length = 526
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 140/310 (45%), Gaps = 49/310 (15%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
+ G G LG G +S P + +L+ G G H + +T G VY+ G N +
Sbjct: 44 VMGTNSSGCLGTGDAQSILEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAY 103
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG + + +L P ++S + K+ + ++ G HHS +T DGE+Y WG N++GQ+G G
Sbjct: 104 SQLG-NGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSG 162
Query: 159 KKAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
A + PIP KV CL A G S+AV G+V +WG G+G+LG G
Sbjct: 163 STANQ--PIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGS---- 216
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S ++ TP I L+G++V+ G+ H+
Sbjct: 217 -----SGNQPTPCRIAALQGIRVEQVVCGYAHTL-------------------------- 245
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 336
+L G +Y WG+N G LG G+ P +V E V+ +C HT+A
Sbjct: 246 ----ALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVD-KERIVEIAACHSSHTSAAK 300
Query: 337 -SEGKILTWG 345
G++ WG
Sbjct: 301 SQSGQVYMWG 310
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 138/326 (42%), Gaps = 62/326 (19%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSS 136
G L+LT+ V+ G N G LG + LEP RI L K +V +S G H
Sbjct: 29 AGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSI-LEPRRIDMLSGKRIVSLSYGSGPHVV 87
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVAVT 193
+T DGE+Y WG N+ QLG G + P + + K+A A G S+ +T
Sbjct: 88 IVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVS----TNLINKKAISVACGSHHSMVLT 143
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSAC 252
G+V +WG SG++G G + ++ PR + L+ V A G + S
Sbjct: 144 CDGEVYAWGYNNSGQVGSGS---------TANQPIPRKVTSCLQNKTVIGIACGQMSSMA 194
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ +NG E+Y WG N NG LG+GS +P
Sbjct: 195 VVDNG------------------------------EVYAWGYNGNGQLGLGSSGNQPTPC 224
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
R+ V+QV CG+ HT A+++ ++ + WG +S GQLG GN +
Sbjct: 225 RI-AALQGIRVEQVVCGYAHTLALTDEGVM-YAWGA----------NSYGQLGTGNKSNQ 272
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGA 398
+P V + +C +HT A
Sbjct: 273 SYPVQVIVDKERIVEIAACHSSHTSA 298
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 111/268 (41%), Gaps = 58/268 (21%)
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTG 194
+T + E+++ G NS+G LG G A+ I P +++ LSG + +L + V VT
Sbjct: 36 LTKNDEVFVMGTNSSGCLGTGD--AQSILEPRRIDMLSG--KRIVSLSYGSGPHVVIVTS 91
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G+V SWG +LG+G + L S + + LI + K A G HS
Sbjct: 92 DGEVYSWGHNAYSQLGNGSTNQAL----SPCQVSTNLINK----KAISVACGSHHSMV-- 141
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
L GE+Y WG N +G +G GS P +V
Sbjct: 142 ----------------------------LTCDGEVYAWGYNNSGQVGSGSTANQPIPRKV 173
Query: 315 QGPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
V ++CG + A + G++ WG+ G+ GQLG G+ +
Sbjct: 174 TSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGN------------GQLGLGSSGNQP 221
Query: 374 HPTIVNFGENVKALQVSCGFNHTGALLE 401
P + + ++ QV CG+ HT AL +
Sbjct: 222 TPCRIAALQGIRVEQVVCGYAHTLALTD 249
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLGS ++ P +A + ++ + CG AHTL LT+ G +YA G N +GQ
Sbjct: 204 WGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQ 263
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG S P+++ K+ +V+I+ + H S+A + G++YMWG+ GQ
Sbjct: 264 LGTGNKSNQSY-PVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWGQ-CRGQ------ 315
Query: 161 AAKVIPIPTKVECLSGIF 178
+ + P T C +F
Sbjct: 316 -SVITPHLTHFSCTDDVF 332
>gi|345323514|ref|XP_003430715.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Ornithorhynchus anatinus]
Length = 806
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 154/352 (43%), Gaps = 53/352 (15%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+ G+ ++G+LGLGS + +P A + +K ACG HTL TE G VYA G N G
Sbjct: 144 MLGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKFAACGRNHTLVCTEGGNVYAAGGNSDG 203
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + + + + ++ Q+S G + S+A+T DGELYMWG NS GQ+GL +
Sbjct: 204 QLGLGDTEERTTFHQISFFTSRYKIKQLSAGSNTSAALTEDGELYMWGDNSEGQIGLASE 263
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P + G + G+ S VT G++ ++G +G+LG E
Sbjct: 264 SNVCVP----CRVVIGKPVSWVSCGYYHSALVTTDGELYTFGEPENGKLGLSSE------ 313
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ + P+L+ + G KV A G H+ + E
Sbjct: 314 -QLKNHRIPQLVPGISG-KVNQVACGGGHTVALTEE------------------------ 347
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
++YT+G E G LG+G+ S +V + + V+CG HTA IS+
Sbjct: 348 -------DVYTFGLGEFGQLGLGTCIFETSVPKVVEHLRKQKIHYVACGENHTALISDTG 400
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
++ G HG LG N + PT+ + V+CG
Sbjct: 401 LMYTFGDGRHGKLG---------LGEENFTNQFIPTLCSNFLRFSVHLVACG 443
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 159/368 (43%), Gaps = 59/368 (16%)
Query: 55 SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
S+E + ++ F K L +G V+ FG+ +ENI
Sbjct: 65 SVEEKRETMIYDDFRKKD--ELRANTYRKFRTRHSGAVFT-----FGKSKFAENI----- 112
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
P + + Q+S G H++ +T + +LYM G N+ GQLGLG K + PT V+ L
Sbjct: 113 PSKFWLRNDTLAQLSCGDEHTAFVTGNSKLYMLGSNNWGQLGLGSKT--TVNKPTCVKAL 170
Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
K AA G ++ T GG V + G G+LG G F S +T R
Sbjct: 171 KPEKVKFAACGRNHTLVCTEGGNVYAAGGNSDGQLGLGDTEERTTF-HQISFFTSRY--- 226
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGN----------------- 276
K+K +AG SA + E+G +Y++GD + ++ L E N
Sbjct: 227 ----KIKQLSAGSNTSAALTEDGELYMWGDNSEGQIGLASESNVCVPCRVVIGKPVSWVS 282
Query: 277 --HARRPSLISGGELYTWGSNENGCLGIGSIDVLHS--PERVQGPFSESPVDQVSCGWKH 332
+ + + GELYT+G ENG LG+ S + + P+ V G V+QV+CG H
Sbjct: 283 CGYYHSALVTTDGELYTFGEPENGKLGLSSEQLKNHRIPQLVPG--ISGKVNQVACGGGH 340
Query: 333 TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 391
T A++E + T+G G GQLG G + + P +V K V+C
Sbjct: 341 TVALTEEDVYTFGLG------------EFGQLGLGTCIFETSVPKVVEHLRKQKIHYVAC 388
Query: 392 GFNHTGAL 399
G NHT +
Sbjct: 389 GENHTALI 396
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 12/209 (5%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ G++GL S + P C + ++CG H+ +T G +Y G + G
Sbjct: 249 MWGDNSEGQIGLASESNVCVP--CRVVIGKPVSWVSCGYYHSALVTTDGELYTFGEPENG 306
Query: 102 QLGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG+ SE + P + G+ +V Q++ G H+ A+T + ++Y +G GQLGLG
Sbjct: 307 KLGLSSEQLKNHRIPQLVPGISGKVNQVACGGGHTVALT-EEDVYTFGLGEFGQLGLGTC 365
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P VE L A G + ++ G + ++G G G+LG G+E+
Sbjct: 366 IFET-SVPKVVEHLRKQKIHYVACGENHTALISDTGLMYTFGDGRHGKLGLGEEN----- 419
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
T+++ P L V + A G H
Sbjct: 420 --FTNQFIPTLCSNFLRFSVHLVACGGCH 446
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + S+ +ACGG H L
Sbjct: 405 FGDGRHGKLGLGEENFTNQFIPTLCSNFLRFSVHLVACGGCHMLVF 450
>gi|328704350|ref|XP_001948518.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Acyrthosiphon pisum]
Length = 1053
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 172/364 (47%), Gaps = 53/364 (14%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEK-HSLKALACGGAHTLFLTETGCVYATGLND 99
WGN G LGLG +E + P FE +++K++ACG HTL +TE G +YA G ND
Sbjct: 4 WGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACGSND 63
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
FGQLG + G + +I G++ V+ ++ G HS A+ G+LY WG +S GQLGL
Sbjct: 64 FGQLG---HDGCRTKLQKIPGVESLVMTSVACGEAHSMALNEWGQLYTWGSDSCGQLGLE 120
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P V+ L+ + Q + G++ +A+T G++ +WG+ G+LG G +
Sbjct: 121 TDEG-IQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGSNEFGQLGLGLGPGNV 179
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P L+ L G+ + A G HS + ++G V+ +G ++
Sbjct: 180 S--------KPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTSL 231
Query: 279 RRPS-----------LISGGE-----------LYTWGSNENGCLGIGSIDVLHSPERVQG 316
P+ I+GGE ++T G+ G LG GS P +V
Sbjct: 232 SSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKVL- 290
Query: 317 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
S V QV+CG +HT + S+G++ ++G G S GQLG + ++
Sbjct: 291 ELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLG------------SVGQLGTKSSINSNT 338
Query: 375 PTIV 378
P +V
Sbjct: 339 PQLV 342
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 123/247 (49%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ G+LGL + E +++P + L ++CG H + LT G +Y G N+FG
Sbjct: 109 WGSDSCGQLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGSNEFG 168
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ G +P ++ L + I+ G +HS ++ G ++ WGKN GQLG+ +
Sbjct: 169 QLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQ 228
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ + P +++ + + K A G + SV +T G V + GAG G+LGHG S+
Sbjct: 229 TS--LSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSN---- 282
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
E PR + EL G V G H+ + GRVY FG +V ++ + ++
Sbjct: 283 -----EIVPRKVLELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLGSVGQLGTKSSINSN 337
Query: 280 RPSLISG 286
P L+ G
Sbjct: 338 TPQLVLG 344
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 47/206 (22%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKV---ECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
+Y WG NG+LGLG I P ++ E ++ I K A G ++AVT G++ +
Sbjct: 1 MYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNI--KSVACGNNHTLAVTEDGQLYA 58
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
G+ G+LGH + L + I +E + + A G HS ++E
Sbjct: 59 CGSNDFGQLGHDGCRTKL-----------QKIPGVESLVMTSVACGEAHSMALNE----- 102
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
G+LYTWGS+ G LG+ + + + ++ +
Sbjct: 103 -------------------------WGQLYTWGSDSCGQLGLETDEGIQYKPKIVKTLAS 137
Query: 321 SPVDQVSCGWKHTAAISE-GKILTWG 345
+ Q+SCG+KH A++ G++ TWG
Sbjct: 138 MLLVQISCGYKHCMALTNHGELYTWG 163
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 61/132 (46%), Gaps = 29/132 (21%)
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG---PFSESPV-DQVSCGW 330
NH ++ G+LY GSN+ G LG H R + P ES V V+CG
Sbjct: 44 NNHTL--AVTEDGQLYACGSNDFGQLG-------HDGCRTKLQKIPGVESLVMTSVACGE 94
Query: 331 KHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND--VDYIHPTIVNFGENVKAL 387
H+ A++E G++ TWG S GQLG D + Y P IV ++ +
Sbjct: 95 AHSMALNEWGQLYTWG------------SDSCGQLGLETDEGIQY-KPKIVKTLASMLLV 141
Query: 388 QVSCGFNHTGAL 399
Q+SCG+ H AL
Sbjct: 142 QISCGYKHCMAL 153
>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
Length = 5087
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 179/387 (46%), Gaps = 57/387 (14%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 4229 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4286
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ + +++ P + L+ V+ +++G H A+T +GE+Y WG+ +G+LG
Sbjct: 4287 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4345
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L G+ A G S A+T G+VL+WG G GRLGHG
Sbjct: 4346 GNRVS--YDRPKLVEHLHGMSVADIACGSAHSAAITASGQVLTWGKGRYGRLGHGD---- 4399
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4400 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4454
Query: 276 NHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + P +L G +YTWG + LG GS+D + P++
Sbjct: 4455 DGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKK 4514
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V + ++ G H A S+ G++ TW G + GQLG G
Sbjct: 4515 VAA-LQGKKIISIATGSLHCVACSDSGEVYTW------------GDNDEGQLGDGTVTAI 4561
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGAL 399
P +V+ + ++V+CG HT AL
Sbjct: 4562 QRPRLVSALQGKHIVKVTCGSAHTLAL 4588
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 154/354 (43%), Gaps = 52/354 (14%)
Query: 30 WISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLT 87
+I S R FA G G GRLGLG + P ++ +K +A GG H L LT
Sbjct: 3120 FIVSQEGRVFAC--GEGTNGRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT 3177
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYM 146
G V++ G + G+LG +P ++ L+ K++ ++ G HS+AI+ GELY
Sbjct: 3178 LDGKVFSWGEGEDGKLGHGNRTTLD-KPRQVEALRAKKIRDVACGSSHSAAISSQGELYT 3236
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAG 204
WG G+LG G A ++ P V L+G Q A G Q++A+T G V SWG G
Sbjct: 3237 WGLGEYGRLGHGDNATQL--KPKLVAALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDG 3294
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LG G S TP I+ L G+ V G S + G V+ +G
Sbjct: 3295 DFGKLGRGG---------SEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGK 3345
Query: 265 RAVDKMLFQEGNHARRPSLISG----------------------GELYTWGSNENGCLGI 302
++ H R+P I G G++Y WG N++G G
Sbjct: 3346 GDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGS 3405
Query: 303 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 356
G+ V P V G + V++V+CG H+ A WG + T E+
Sbjct: 3406 GNTFVNKKPALVIG-LDDVFVNRVACGSSHSIA----------WGLPNATMEEE 3448
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 134/303 (44%), Gaps = 48/303 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + S+ +ACG AH+ +T +G V G +G+
Sbjct: 4335 WGEGEDGKLGHGNRVSYDRPKLVEHLHGMSVADIACGSAHSAAITASGQVLTWGKGRYGR 4394
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4395 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4452
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4453 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4509
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P+ + L+G K+ A G LH AC D
Sbjct: 4510 -------RRPKKVAALQGKKIISIATGSLHCVACSD------------------------ 4538
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
GE+YTWG N+ G LG G++ + P R+ + +V+CG HT A+S
Sbjct: 4539 -------SGEVYTWGDNDEGQLGDGTVTAIQRP-RLVSALQGKHIVKVTCGSAHTLALST 4590
Query: 339 GKI 341
++
Sbjct: 4591 SQL 4593
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 149/351 (42%), Gaps = 79/351 (22%)
Query: 92 VYATGLNDFGQLG-----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
V GLND QLG S+ I L P+ I+G K + +S
Sbjct: 3076 VMVWGLNDKEQLGGLKGSKVKVPTFSQTIS-RLRPIHIAGGSKSLFIVSQ---------- 3124
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
+G ++ G+ +NG+LGLG +P+P ++ L K+ A+ G + ++A+T GKV
Sbjct: 3125 EGRVFACGEGTNGRLGLG--VTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3182
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG +++ PR ++ L K++ A G HSA I G
Sbjct: 3183 FSWGEGEDGKLGHGNRTTL---------DKPRQVEALRAKKIRDVACGSSHSAAISSQGE 3233
Query: 259 VYIF----------GDRAVD-----------KMLFQEG---NHARRPSLISGGELYTWGS 294
+Y + GD A + + Q A+ +L G +++WG
Sbjct: 3234 LYTWGLGEYGRLGHGDNATQLKPKLVAALAGRRVVQVACGSRDAQTLALTEDGAVFSWGD 3293
Query: 295 NENGCLGIG---SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 350
+ G LG G D H ER+ G V Q+ CG + + A++ G++ TWG G +
Sbjct: 3294 GDFGKLGRGGSEGSDTPHEIERLSG----IGVIQIECGAQFSLALTRAGEVWTWGKGDYY 3349
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHG D P + + + V+ G H A+ +
Sbjct: 3350 ------------RLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTD 3388
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 107/224 (47%), Gaps = 15/224 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ RLG G +R P +A E+H ++++ CG ++ +T G + G + +
Sbjct: 655 WGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAVITCGGNLLTWGRGTYAR 714
Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + L L + + VV ++ +G HS A+T +G ++ WG G+LG G
Sbjct: 715 LGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNC 774
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILG 219
+ PI VE L + ++ G + SVA++ G+V +WG LGH E S+ G
Sbjct: 775 NGSLQPI--LVESLPRV--QRIFAGSQYSVALSSEGQVYTWGKATC--LGHQLVERSVQG 828
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
PRL+ L+ ++ A G H + +G V+ +G
Sbjct: 829 C------SVPRLVSSLQHKRIVDMAVGVAHCLALSSSGEVFGWG 866
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 106/250 (42%), Gaps = 53/250 (21%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG N GQLG G + ++ I PT E LS + Q A G + AVT GK+ + G
Sbjct: 4226 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4283
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
LG S S P L+ L+ V VK A C+
Sbjct: 4284 ---------GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCL---------- 4324
Query: 264 DRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
+L + GE+Y WG E+G LG G+ P+ V+ S
Sbjct: 4325 ------------------ALTTEGEVYAWGEGEDGKLGHGNRVSYDRPKLVEHLHGMSVA 4366
Query: 324 DQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 382
D ++CG H+AAI+ G++LTWG G G+LGHG+ D + P +V
Sbjct: 4367 D-IACGSAHSAAITASGQVLTWGKG------------RYGRLGHGDSEDQLRPKLVEALL 4413
Query: 383 NVKALQVSCG 392
+A+ ++CG
Sbjct: 4414 GYRAIDIACG 4423
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 123/315 (39%), Gaps = 60/315 (19%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV+ F+ +K + C L L++ G ++A L+ EP +
Sbjct: 581 PVLSCRFQ---VKQVVCSENQVLLLSQEGKLHAWRLSK-----------PEAEPQPLEEA 626
Query: 122 KKEVVQISTGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
E IS H H AI + Y WG + +LG G A+ +PTK+ L
Sbjct: 627 GHETF-ISIAGHCEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARA--VPTKIAALEQH 683
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-E 236
+ G S +T GG +L+WG G RLGHG S P L+ L E
Sbjct: 684 CVQSVFCGCTYSAVITCGGNLLTWGRGTYARLGHGN---------SDDRCLPTLVAALAE 734
Query: 237 GVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI----------- 284
V +A +G HS + G V+ +GD K+ N + +P L+
Sbjct: 735 HTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRIFA 794
Query: 285 ---------SGGELYTWGSNENGCLGIG----SIDVLHSPERVQGPFSESPVDQVSCGWK 331
S G++YTWG + CLG S+ P V + VD ++ G
Sbjct: 795 GSQYSVALSSEGQVYTWG--KATCLGHQLVERSVQGCSVPRLVSSLQHKRIVD-MAVGVA 851
Query: 332 HTAAI-SEGKILTWG 345
H A+ S G++ WG
Sbjct: 852 HCLALSSSGEVFGWG 866
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 56/168 (33%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDF 100
WG G Y RLG G+ + R P + +A +H++ AL G AH+L LT G V+A G D+
Sbjct: 707 WGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDY 766
Query: 101 GQLGISENIGYSLEPLRISGLK-------------------------------------- 122
G+LG + N SL+P+ + L
Sbjct: 767 GKLG-NGNCNGSLQPILVESLPRVQRIFAGSQYSVALSSEGQVYTWGKATCLGHQLVERS 825
Query: 123 ---------------KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
K +V ++ G H A++ GE++ WG+N Q+
Sbjct: 826 VQGCSVPRLVSSLQHKRIVDMAVGVAHCLALSSSGEVFGWGRNDCQQV 873
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 16/106 (15%)
Query: 274 EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 333
EG H ++ S Y+WG+ E+ LG G P ++ + V V CG ++
Sbjct: 639 EGRHFM--AIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAA-LEQHCVQSVFCGCTYS 695
Query: 334 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
A I+ G +LTWG GT++ +LGHGN D PT+V
Sbjct: 696 AVITCGGNLLTWG----RGTYA--------RLGHGNSDDRCLPTLV 729
>gi|297815950|ref|XP_002875858.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297321696|gb|EFH52117.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 962
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 162/371 (43%), Gaps = 75/371 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF-- 100
WG GRLG G P + F+ +++ CG HT +T +G +YA G D
Sbjct: 328 WGEESGGRLGHGVCSYVPHPKLIDEFDGSTVELADCGEFHTCAVTTSGDLYAWGDGDHNA 387
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG+ + +P+RI G + V IS G H++ +T G+L+ +G + G LG G
Sbjct: 388 GLLGLGSGASH-WKPVRILGQMEGINVRTISCGPWHTAFVTSAGKLFTFGDGTFGALGHG 446
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-------TGGGKVLSWGAGGSGRLGH 211
+ + IP +VE L+G T + A G S AV + GK+ +WG G G+LGH
Sbjct: 447 DRIS--TNIPREVEALNGCRTIRTACGVWHSAAVVSVFGEASSSGKLFTWGDGDDGKLGH 504
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--DRAVDK 269
G +S L P + EL+ + A G + + +G+VY G D + D
Sbjct: 505 GDIASRL---------IPLSVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPSQD- 554
Query: 270 MLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 329
DV+ +P ++G +S V +V+CG
Sbjct: 555 ------------------------------------DVVRAPSCIEGGLGKSFVQEVACG 578
Query: 330 WKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 388
+ H A + S+ ++ TWG G S GQLGHG+ PT+V + + +
Sbjct: 579 YHHIAVLNSKAEVYTWGKG------------SNGQLGHGDTEYRRMPTLVKALKGKQVRK 626
Query: 389 VSCGFNHTGAL 399
V CG N+T +
Sbjct: 627 VVCGSNYTATI 637
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 99/235 (42%), Gaps = 50/235 (21%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P ++ + + + G +V VT G++ SWG GRLGHG S +
Sbjct: 294 LPKVLKSHVALDAQSISCGTNYAVLVTKQGQLYSWGEESGGRLGHGVCSYVPH------- 346
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
P+LI E +G V++A G H+ + +G +Y +GD
Sbjct: 347 --PKLIDEFDGSTVELADCGEFHTCAVTTSGDLYAWGD---------------------- 382
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 345
G + G LG+GS P R+ G V +SCG HTA + S GK+ T+G
Sbjct: 383 ------GDHNAGLLGLGSGASHWKPVRILGQMEGINVRTISCGPWHTAFVTSAGKLFTFG 436
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
GTF G LGHG+ + P V + ++ +CG H+ A++
Sbjct: 437 ----DGTF--------GALGHGDRISTNIPREVEALNGCRTIRTACGVWHSAAVV 479
>gi|149701724|ref|XP_001494887.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Equus
caballus]
Length = 988
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 135/306 (44%), Gaps = 42/306 (13%)
Query: 47 DYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGIS 106
D+ LE P E + ++CG H+L + G V+A G GQLG
Sbjct: 22 DFMPPSNSPLEETKNPEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTG 81
Query: 107 ENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
E G + P +I L +++Q+S G +HS A++ G+++ WGKNS GQLGLGK+
Sbjct: 82 EVKGINFTPKKIKTLTGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQ- 140
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P +V L GI Q A G S A++ G WG +G+L + G
Sbjct: 141 DSPQRVRSLEGIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLA------LSGNNVPVQ 194
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
Y PR I L + V + G+ H+A + +NG+V+ FGD + ++ R P L+
Sbjct: 195 SYKPRSIGALRNLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGHSPSAQDRGPQLV- 253
Query: 286 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILT 343
ER+ G V Q+ CG HT A + G++++
Sbjct: 254 --------------------------ERIDG-----LVSQIDCGSYHTLAYVYTTGQVVS 282
Query: 344 WGWGGS 349
+G G S
Sbjct: 283 FGRGPS 288
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 115/246 (46%), Gaps = 26/246 (10%)
Query: 24 LGICKRWISSTLQRRFAALWGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAH 82
L +C R R FA WG G G+LG G ++ + P + ++CG H
Sbjct: 59 LAVCHRG------RVFA--WGAGSEGQLGTGEVKGINFTPKKIKTLTGIKIIQVSCGDYH 110
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD 141
+L L+E G V++ G N GQLG+ + P R+ L+ + Q++ G HS A++V
Sbjct: 111 SLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLEGIPLAQVAAGGAHSFALSVS 170
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
G + WG NS GQL L + +P+ P + L + + G+E + +T GK
Sbjct: 171 GTSFGWGNNSAGQLAL---SGNNVPVQSYKPRSIGALRNLGVIYISCGYEHTAVLTQNGK 227
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V ++G G+LGH + G P+L++ ++G+ +I + A + G
Sbjct: 228 VFTFGDNSCGQLGHSPSAQDRG---------PQLVERIDGLVSQIDCGSYHTLAYVYTTG 278
Query: 258 RVYIFG 263
+V FG
Sbjct: 279 QVVSFG 284
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 102/238 (42%), Gaps = 54/238 (22%)
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P + L + + G E S+AV G+V +WGAG G+LG G+ I +
Sbjct: 37 PEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGI--------NF 88
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
TP+ IK L G+K+ + G HS + E GG
Sbjct: 89 TPKKIKTLTGIKIIQVSCGDYHSLALSE------------------------------GG 118
Query: 288 ELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
++++WG N G LG+G SP+RV+ P+ QV+ G H+ A+S ++GW
Sbjct: 119 QVFSWGKNSQGQLGLGKEFPSQDSPQRVRS-LEGIPLAQVAAGGAHSFALSVSGT-SFGW 176
Query: 347 GGSHGTFSEDGHSSGGQL---GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G ++S GQL G+ V P + N+ + +SCG+ HT L +
Sbjct: 177 G----------NNSAGQLALSGNNVPVQSYKPRSIGALRNLGVIYISCGYEHTAVLTQ 224
>gi|114595107|ref|XP_001160807.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Pan troglodytes]
Length = 984
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 143/309 (46%), Gaps = 42/309 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ SG+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
L+ ER+ G V Q+ CG HT A + G+
Sbjct: 281 LV---------------------------ERIDG-----LVSQIDCGSYHTLAYVHTTGQ 308
Query: 341 ILTWGWGGS 349
++++G G S
Sbjct: 309 VVSFGHGPS 317
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 124/282 (43%), Gaps = 56/282 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLTVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G HS + ++ +V ++WG N +G LG+G
Sbjct: 134 SCGHYHSLALSKDSQV------------------------------FSWGKNSHGQLGLG 163
Query: 304 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
SP+RV+ P+ QV+ G H+ A+S ++GWG +S G
Sbjct: 164 KEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLCGT-SFGWGS----------NSSG 211
Query: 363 QL---GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QL G V P V +N+ + +SCG HT L +
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQ 253
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS+GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ +I + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ G + G N G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSG 211
Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N+ S +PL + LK VV IS G H++ +T DG+++ +G N +GQLG
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
K P VE + G+ ++ + V G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 77/188 (40%), Gaps = 38/188 (20%)
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG---------- 286
G ++ AA+G HS + N RV GD + ++ + P I
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVS 81
Query: 287 ------------GELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 333
G ++ WG+ G LGIG ++ +P+++ + + QVSCG H+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT-LNGIKIIQVSCGHYHS 140
Query: 334 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 391
A+S + ++ +W G +S GQLG G + P V E + QV+
Sbjct: 141 LALSKDSQVFSW------------GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAA 188
Query: 392 GFNHTGAL 399
G H+ AL
Sbjct: 189 GGAHSFAL 196
>gi|403355850|gb|EJY77515.1| RCC1 and BTB domain-containing protein, putative [Oxytricha
trifallax]
Length = 546
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 13/207 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G DYG+LGLG+L+ + P + A + ++ CG H++ + G +++ G ND GQL
Sbjct: 144 GRNDYGQLGLGNLDDKNSPTLIEALNGKRIVSIGCGQYHSVVSSIDGEIFSFGRNDSGQL 203
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
GI+ + G P + LK QI+ GY+H+ AI +G+LY WGKN +GQLG+G +AK
Sbjct: 204 GITGSDGNISLPKEVKNLKS--TQIACGYYHTVAIN-NGQLYSWGKNDSGQLGIGIYSAK 260
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
I +PT V L A G ++A+ G++ S+G G+LG G +
Sbjct: 261 EI-LPTLVRDLEDQEIVSVACGCYHTLALGYAGQLFSFGRNSHGQLGDG---------TT 310
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHS 250
+ P LI+ L KV AAGF HS
Sbjct: 311 NNSCKPLLIQGLIDKKVCQIAAGFYHS 337
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 137/295 (46%), Gaps = 47/295 (15%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFGQLGISE 107
G+LG G S P A + + A+ C HT+F + +Y+ G ND+GQLG+
Sbjct: 96 GQLGHGDQTSINSPKQVEALSRKFVTAVGCSYYHTIFSCADEMEIYSCGRNDYGQLGLG- 154
Query: 108 NIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N+ P I L K +V I G +HS ++DGE++ +G+N +GQLG+ I
Sbjct: 155 NLDDKNSPTLIEALNGKRIVSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGN-IS 213
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +V+ L + Q A G+ +VA+ G++ SWG SG+LG G + S E
Sbjct: 214 LPKEVKNLK---STQIACGYYHTVAIN-NGQLYSWGKNDSGQLGIG--------IYSAKE 261
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
P L+++LE ++ A G H+ +L
Sbjct: 262 ILPTLVRDLEDQEIVSVACGCYHTL------------------------------ALGYA 291
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 341
G+L+++G N +G LG G+ + P +QG + V Q++ G+ H+ ++ I
Sbjct: 292 GQLFSFGRNSHGQLGDGTTNNSCKPLLIQG-LIDKKVCQIAAGFYHSIVLANPVI 345
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 160/362 (44%), Gaps = 65/362 (17%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISE-----NIGYSLEPLRISGLK-------K 123
+A G HTL LT+ G VY+ G N+ G +S+ + + R LK K
Sbjct: 6 VAAGNEHTLILTDCGDVYSGGYNEMGN-SLSQGPNAMSQNNNNNNTRTGQLKLVEKLRGK 64
Query: 124 EVVQI--STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+V+I S G H A+T +G+++ +G N GQLG G + + I P +VE LS F
Sbjct: 65 NIVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTS--INSPKQVEALSRKFVTA 122
Query: 182 AALGFEQSV-AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
+ ++ + ++ S G G+LG LG L + +P LI+ L G ++
Sbjct: 123 VGCSYYHTIFSCADEMEIYSCGRNDYGQLG-------LGNLDDKN--SPTLIEALNGKRI 173
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKM----------LFQEGNHARRPSL------- 283
G HS +G ++ FG ++ L +E + + +
Sbjct: 174 VSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGNISLPKEVKNLKSTQIACGYYHT 233
Query: 284 --ISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ----VSCGWKHTAAIS 337
I+ G+LY+WG N++G LGIG ++S + + DQ V+CG HT A+
Sbjct: 234 VAINNGQLYSWGKNDSGQLGIG----IYSAKEILPTLVRDLEDQEIVSVACGCYHTLAL- 288
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
G+ G +F G +S GQLG G + P ++ + K Q++ GF H+
Sbjct: 289 -------GYAGQLFSF---GRNSHGQLGDGTTNNSCKPLLIQGLIDKKVCQIAAGFYHSI 338
Query: 398 AL 399
L
Sbjct: 339 VL 340
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 135/312 (43%), Gaps = 63/312 (20%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQ-LGLGKKAAKVIPIPTK--------VECLS 175
V+Q++ G H+ +T G++Y G N G L G A VE L
Sbjct: 3 VIQVAAGNEHTLILTDCGDVYSGGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVEKLR 62
Query: 176 G--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
G I A+ G E +A+T GKV S+G G+LGHG ++SI +P+ ++
Sbjct: 63 GKNIVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSI---------NSPKQVE 113
Query: 234 ELEGVKVKIAAAGFLHS--ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----- 286
L V + H+ +C DE +Y G ++ + P+LI
Sbjct: 114 ALSRKFVTAVGCSYYHTIFSCADE-MEIYSCGRNDYGQLGLGNLDDKNSPTLIEALNGKR 172
Query: 287 -----------------GELYTWGSNENGCLGI-GSIDVLHSPERVQGPFSESPVDQVSC 328
GE++++G N++G LGI GS + P+ V+ S Q++C
Sbjct: 173 IVSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGNISLPKEVKNLKST----QIAC 228
Query: 329 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG-NDVDYIHPTIVNFGENVKAL 387
G+ HT AI+ G++ +WG S GQLG G I PT+V E+ + +
Sbjct: 229 GYYHTVAINNGQLYSWGKNDS------------GQLGIGIYSAKEILPTLVRDLEDQEIV 276
Query: 388 QVSCGFNHTGAL 399
V+CG HT AL
Sbjct: 277 SVACGCYHTLAL 288
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 43 WGNGDYGRLGLGSLESR-WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG D G+LG+G ++ P + E + ++ACG HTL L G +++ G N G
Sbjct: 244 WGKNDSGQLGIGIYSAKEILPTLVRDLEDQEIVSVACGCYHTLALGYAGQLFSFGRNSHG 303
Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQISTGYHHS 135
QLG S +PL I GL K+V QI+ G++HS
Sbjct: 304 QLG-DGTTNNSCKPLLIQGLIDKKVCQIAAGFYHS 337
>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
harrisii]
Length = 4483
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 46/301 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 3817 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGR 3876
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 3877 LGHGDSED-QLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 3934
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 3935 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3991
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 3992 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4022
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ +++V+CG HT A S
Sbjct: 4023 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACGSAHTLAWSTS 4073
Query: 340 K 340
K
Sbjct: 4074 K 4074
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 138/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 2823 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 2882
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 2883 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2940
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 2941 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV-- 2997
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + + G+VY
Sbjct: 2998 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVY------------------- 3031
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3032 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3075
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 155/337 (45%), Gaps = 50/337 (14%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2713 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 2772
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G ++A+T GK+ SWG G G+L
Sbjct: 2773 NGRLGLGISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKL 2831
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------ 263
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G
Sbjct: 2832 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 2882
Query: 264 -----------DRAVDKMLFQE-------GNHARRPSLISGGELYTWGSNENGCLGIGSI 305
+ V +L A+ +L G +++WG + G LG G
Sbjct: 2883 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2942
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 364
+ + P+ ++ + V Q+ CG + + A+++ G + TWG G +L
Sbjct: 2943 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 2989
Query: 365 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GHG DV P +V K + V+ G H A+ +
Sbjct: 2990 GHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3026
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 170/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3711 WGHNHRGQLGGIEGAKVKVPTPCEALA--ALRPIQLIGGEQTLFAVTADGKLYATGYGAG 3768
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3769 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3826
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S +T G + +WG G GRLGHG
Sbjct: 3827 HGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGD--- 3881
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 3882 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3935
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 3936 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3995
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 3996 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4042
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4043 IQRPRLVAALQGKKINRVACGSAHTLA 4069
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 162/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2751 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 2810
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 2811 AMALTVDGKIFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 2868
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 2869 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2919
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 2920 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2979
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG G+ + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 2980 TWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWG---- 3034
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3035 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3075
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 144/335 (42%), Gaps = 53/335 (15%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
+G +Y G N GQLG E + P L +Q+ G A+T DG+LY
Sbjct: 3705 SGTIYGWGHNHRGQLGGIEGAKVKV-PTPCEALAALRPIQLIGGEQTLFAVTADGKLYAT 3763
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGG 205
G + G+LG + + PT +E + +F K+ A+ G + +A++ G+V SWG
Sbjct: 3764 GYGAGGRLG--IGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3821
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LGHG S PR+I+ L G++V AAG HSACI G +Y +G
Sbjct: 3822 DGKLGHGNRSPC---------DRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKG 3872
Query: 266 AVDKMLFQEGNHARRPSLISGGE------------------------LYTWGSNENGCLG 301
++ + +P L+ + +++WG + G LG
Sbjct: 3873 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 3932
Query: 302 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSS 360
G D P ++ + V +V CG + + A+++ G + TWG G H
Sbjct: 3933 RGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH---------- 3981
Query: 361 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
+LGHG+D P V + K + ++ G H
Sbjct: 3982 --RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4014
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2705 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2762
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 2763 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVA---VHSG---- 2807
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 2808 -------------------GRHAM--ALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIE 2846
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AAI S G++ TWG G G+LGHG++ +
Sbjct: 2847 A-LKTKRIRDIACGSSHSAAITSSGELYTWGLG------------EYGRLGHGDNTTQLK 2893
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 2894 PKMVKVLLGHRVIQVACGSRDAQTL 2918
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 71/187 (37%), Gaps = 42/187 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +G+ +SL
Sbjct: 357 PIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLVGVVA--VFSL-------- 406
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+ G+++ WG G+LG G + P +E L + +
Sbjct: 407 ------------------IFGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVK 446
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
G + SVA+T G+V SWG G + RLGHG E + R K LEG++
Sbjct: 447 VRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHV------------RYPKLLEGLQAT 494
Query: 242 IAAAGFL 248
+ A L
Sbjct: 495 LPQANCL 501
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 414 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQR 473
Query: 103 L--GISENIGYSLEPLRISGLKKEVVQ 127
L G E++ Y P + GL+ + Q
Sbjct: 474 LGHGTEEHVRY---PKLLEGLQATLPQ 497
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 69/173 (39%), Gaps = 40/173 (23%)
Query: 115 PLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P++ GL + QI+ ++ +G +YM NS+ +G+ V
Sbjct: 357 PIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLVGV-------------VAV 403
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
S IF G+V SWG G G+LG G S TP+LI+
Sbjct: 404 FSLIF-----------------GQVWSWGDGDYGKLGRGG---------SDGCKTPKLIE 437
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
+L+ + V G S + ++G+VY +G ++ H R P L+ G
Sbjct: 438 KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG 490
>gi|410211612|gb|JAA03025.1| hect domain and RLD 6 [Pan troglodytes]
Length = 1020
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 146/321 (45%), Gaps = 44/321 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ SG+L + G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLA------LSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
L+ ER+ G V Q+ CG HT A + G+
Sbjct: 281 LV---------------------------ERIDG-----LVSQIDCGSYHTLAYVHTTGQ 308
Query: 341 ILTWGWGGSHGTFSEDGHSSG 361
++++G G S S+ HS
Sbjct: 309 VVSFGHGPSDT--SKPTHSEA 327
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 124/282 (43%), Gaps = 56/282 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLTVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G HS + ++ +V ++WG N +G LG+G
Sbjct: 134 SCGHYHSLALSKDSQV------------------------------FSWGKNSHGQLGLG 163
Query: 304 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
SP+RV+ P+ QV+ G H+ A+S ++GWG +S G
Sbjct: 164 KEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLCGT-SFGWGS----------NSSG 211
Query: 363 QL---GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QL G V P V +N+ + +SCG HT L +
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQ 253
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS+GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ +I + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ G + G N G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSG 211
Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N+ S +PL + LK VV IS G H++ +T DG+++ +G N +GQLG
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
K P VE + G+ ++ + V G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 77/188 (40%), Gaps = 38/188 (20%)
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG---------- 286
G ++ AA+G HS + N RV GD + ++ + P I
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVS 81
Query: 287 ------------GELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 333
G ++ WG+ G LGIG ++ +P+++ + + QVSCG H+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT-LNGIKIIQVSCGHYHS 140
Query: 334 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 391
A+S + ++ +W G +S GQLG G + P V E + QV+
Sbjct: 141 LALSKDSQVFSW------------GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAA 188
Query: 392 GFNHTGAL 399
G H+ AL
Sbjct: 189 GGAHSFAL 196
>gi|114595105|ref|XP_001160851.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Pan troglodytes]
Length = 1020
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 146/321 (45%), Gaps = 44/321 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ SG+L + G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLA------LSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
L+ ER+ G V Q+ CG HT A + G+
Sbjct: 281 LV---------------------------ERIDG-----LVSQIDCGSYHTLAYVHTTGQ 308
Query: 341 ILTWGWGGSHGTFSEDGHSSG 361
++++G G S S+ HS
Sbjct: 309 VVSFGHGPSDT--SKPTHSEA 327
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 124/282 (43%), Gaps = 56/282 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLTVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G HS + ++ +V ++WG N +G LG+G
Sbjct: 134 SCGHYHSLALSKDSQV------------------------------FSWGKNSHGQLGLG 163
Query: 304 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
SP+RV+ P+ QV+ G H+ A+S ++GWG +S G
Sbjct: 164 KEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLCGT-SFGWGS----------NSSG 211
Query: 363 QL---GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QL G V P V +N+ + +SCG HT L +
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQ 253
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS+GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ +I + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ G + G N G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSG 211
Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N+ S +PL + LK VV IS G H++ +T DG+++ +G N +GQLG
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
K P VE + G+ ++ + V G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 77/188 (40%), Gaps = 38/188 (20%)
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG---------- 286
G ++ AA+G HS + N RV GD + ++ + P I
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVS 81
Query: 287 ------------GELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 333
G ++ WG+ G LGIG ++ +P+++ + + QVSCG H+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT-LNGIKIIQVSCGHYHS 140
Query: 334 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 391
A+S + ++ +W G +S GQLG G + P V E + QV+
Sbjct: 141 LALSKDSQVFSW------------GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAA 188
Query: 392 GFNHTGAL 399
G H+ AL
Sbjct: 189 GGAHSFAL 196
>gi|170581639|ref|XP_001895769.1| hypothetical protein [Brugia malayi]
gi|158597158|gb|EDP35375.1| conserved hypothetical protein [Brugia malayi]
Length = 916
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 152/322 (47%), Gaps = 56/322 (17%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLEPLRISGLKKEVVQI 128
++K++A G HTLFL++ G V++ G N G+LG + E Y++ P+ IS ++QI
Sbjct: 48 TVKSIASGERHTLFLSDDGKVWSCGSNYNGELGRGGVREG-SYTIYPVHISS-TVSIIQI 105
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGL-GKKAAKVIP--IPTKVECLSGIFTKQAALG 185
S G HS A++ DG L+ WG NS+GQL + G A P +P+ E T Q A G
Sbjct: 106 SAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDILASDTPKRVPSLPE------TVQVACG 159
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+V++ GGG+V WG GR+ H E+E + + I
Sbjct: 160 ASHTVSLNGGGRVFIWGQQSDGRIRHSP-------------------AEVE-IFISIPIV 199
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSI 305
+ + C N ++ ++ E + +L G +++ GS+ G LG G
Sbjct: 200 QNVVNPCAVPN----------INSVVAVECGDSHSIALTHEGRVFSCGSDSFGQLGCGQP 249
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 365
+ + R S V +++CG HT ++ GK+ T+G +S GQLG
Sbjct: 250 NRSQNCMRGITEMLGSHVTRIACGRCHTIVVANGKMHTFGL------------NSNGQLG 297
Query: 366 HGNDVDYIHPTIVNFGENVKAL 387
HGN + I P +++ ENV ++
Sbjct: 298 HGNTRNQITPRVIDSVENVASV 319
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 20/152 (13%)
Query: 42 LWGNGDYGRLGLGSLESRWR---PVV------CSAFEKHSLKALACGGAHTLFLTETGCV 92
+WG GR+ E P+V C+ +S+ A+ CG +H++ LT G V
Sbjct: 174 IWGQQSDGRIRHSPAEVEIFISIPIVQNVVNPCAVPNINSVVAVECGDSHSIALTHEGRV 233
Query: 93 YATGLNDFGQLGI-----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
++ G + FGQLG S+N + + L V +I+ G H + + +G+++ +
Sbjct: 234 FSCGSDSFGQLGCGQPNRSQNCMRGITEM----LGSHVTRIACGRCH-TIVVANGKMHTF 288
Query: 148 GKNSNGQLGLGKKAAKVIP-IPTKVECLSGIF 178
G NSNGQLG G ++ P + VE ++ +F
Sbjct: 289 GLNSNGQLGHGNTRNQITPRVIDSVENVASVF 320
>gi|291408963|ref|XP_002720777.1| PREDICTED: regulator of chromosome condensation (RCC1) and BTB
(POZ) domain containing protein 1 [Oryctolagus
cuniculus]
Length = 531
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 140/301 (46%), Gaps = 49/301 (16%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS + DGE+Y WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMVLAADGEVYAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V +WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYAWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
TP V++AA LHS C+++ + G +A +L
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ----IVCG-------------YAHTLALTDE 251
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTW 344
G LY WG+N G LG G+ + L SP V E V+ +C HT+A G + W
Sbjct: 252 GLLYAWGANTYGQLGTGNKNNLLSPAHVMVE-KERVVEIAACHSAHTSAAKTQGGHVYMW 310
Query: 345 G 345
G
Sbjct: 311 G 311
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G VYA G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMVLAADGEVYAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYAWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHVMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 137/312 (43%), Gaps = 51/312 (16%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V A G HS + +G VY +G ++ G+ A +P+
Sbjct: 127 IKQVVEV-----ACGSHHSMVLAADGEVYAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV S V+Q+
Sbjct: 180 IKRVVGIACGQTSSMAVLDNGEVYAWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG ++ GQLG GN + + P V +
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHVMVEKERVV 287
Query: 387 LQVSCGFNHTGA 398
+C HT A
Sbjct: 288 EIAACHSAHTSA 299
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P + K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHVMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
>gi|383455292|ref|YP_005369281.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
2259]
gi|380729146|gb|AFE05148.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
2259]
Length = 744
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 157/371 (42%), Gaps = 89/371 (23%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LG G+L +R PV + +A G H+L L G V+A G ND GQ
Sbjct: 118 WGRNDDGQLGDGTLSTRGDPVQVQGLS--GVTTVALGATHSLALCYDGSVWAWGANDHGQ 175
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG +I P ++GL+ EVV ++ G +HS A+ DG ++ WG+N +GQLG G
Sbjct: 176 LGDGTSIARR-TPQMVAGLQ-EVVAVAAGANHSLAVLSDGTVWAWGENYDGQLGDGTTVT 233
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P+P ++ LSGI A G S+A+ G V +WG+ SG+LG G
Sbjct: 234 RRVPVP--IQGLSGIVA--VASGTSHSLALRYDGNVWAWGSNYSGQLGDGS--------- 280
Query: 223 STSEYTPRLIKELEGV-------------------------------------------- 238
S S +P + EL G+
Sbjct: 281 SLSRSSPVQVTELSGIVSVEGGPDYSMAVRYDGTVWTWGINTYGQLGDGTTIARSVPVQT 340
Query: 239 ----KVKIAAAGFLHSACIDENGRVYIFG----------DRAV--------DKMLFQEGN 276
V AAG H+ + N ++ +G R+V ++++
Sbjct: 341 SGLSGVVAVAAGRTHALAMRANNSIWAWGGNVNGQRGDESRSVYFSPRTILNEVVTMAAT 400
Query: 277 HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 336
+ ++ S G L+ WG+N G LG G+ +P V G V V+ G +H+ A+
Sbjct: 401 NDHSLAVRSDGGLWAWGANNEGQLGDGTTKNRWAPAEVLG-----NVVSVAAGRRHSLAV 455
Query: 337 SEGKILTWGWG 347
+ L W WG
Sbjct: 456 RDDGSL-WAWG 465
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 155/359 (43%), Gaps = 59/359 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG GS SR PV + E + ++ G +++ + G V+ G+N +GQ
Sbjct: 268 WGSNYSGQLGDGSSLSRSSPVQVT--ELSGIVSVEGGPDYSMAVRYDGTVWTWGINTYGQ 325
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I S+ P++ SGL VV ++ G H+ A+ + ++ WG N NGQ G ++
Sbjct: 326 LGDGTTIARSV-PVQTSGLSG-VVAVAAGRTHALAMRANNSIWAWGGNVNGQRGDESRSV 383
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P E ++ T + S+AV G + +WGA G+LG G
Sbjct: 384 YFSPRTILNEVVTMAATN------DHSLAVRSDGGLWAWGANNEGQLGDGT--------- 428
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ + + P E+ G V + AAG HS + ++G ++ +G V ++ G+ P
Sbjct: 429 TKNRWAP---AEVLGNVVSV-AAGRRHSLAVRDDGSLWAWGSNTVGQLGDGTGSSRTIPM 484
Query: 283 LISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
+ G L+ WG N G LG G+ H P RVQG S
Sbjct: 485 QVPGISGIASVAAGSDYSVALRYDRTLWAWGENSYGQLGDGTTVNRHVPTRVQG---LSG 541
Query: 323 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
+ ++ G H A+ S G + W G +S GQLG G ++ P V
Sbjct: 542 IVAIATGNGHMLAVRSNGTVWAW------------GDNSSGQLGDGTTINRATPVQVQV 588
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 159/356 (44%), Gaps = 57/356 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R PV + A+A G +H+L L G V+A G N GQ
Sbjct: 218 WGENYDGQLGDGTTVTRRVPVPIQGLS--GIVAVASGTSHSLALRYDGNVWAWGSNYSGQ 275
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ S P++++ L +V + G +S A+ DG ++ WG N+ GQLG G A
Sbjct: 276 LGDGSSLSRS-SPVQVTELSG-IVSVEGGPDYSMAVRYDGTVWTWGINTYGQLGDGTTIA 333
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P+ T LSG+ A G ++A+ + +WG +G+ G ES + F
Sbjct: 334 RSVPVQTS--GLSGVVA--VAAGRTHALAMRANNSIWAWGGNVNGQ--RGDESRSVYF-- 385
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
+PR I +V AA HS + +G ++ +G A ++ +G R
Sbjct: 386 -----SPRTILN----EVVTMAATNDHSLAVRSDGGLWAWG--ANNEGQLGDGTTKNRWA 434
Query: 281 PSLISG------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
P+ + G G L+ WGSN G LG G+ P +V G S
Sbjct: 435 PAEVLGNVVSVAAGRRHSLAVRDDGSLWAWGSNTVGQLGDGTGSSRTIPMQVPG---ISG 491
Query: 323 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
+ V+ G ++ A+ + L W W G +S GQLG G V+ PT V
Sbjct: 492 IASVAAGSDYSVALRYDRTL-WAW----------GENSYGQLGDGTTVNRHVPTRV 536
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 153/359 (42%), Gaps = 69/359 (19%)
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQI 128
+ + +A H+L + G ++A G N+ GQLG ++N P + G VV +
Sbjct: 392 NEVVTMAATNDHSLAVRSDGGLWAWGANNEGQLGDGTTKN---RWAPAEVLG---NVVSV 445
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
+ G HS A+ DG L+ WG N+ GQLG G +++ IP+ +V +SGI + A G +
Sbjct: 446 AAGRRHSLAVRDDGSLWAWGSNTVGQLGDGTGSSRTIPM--QVPGISGIAS--VAAGSDY 501
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
SVA+ + +WG G+LG G + + + P ++ L G+ V I A G
Sbjct: 502 SVALRYDRTLWAWGENSYGQLGDGT---------TVNRHVPTRVQGLSGI-VAI-ATGNG 550
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS----------------------G 286
H + NG V+ +GD + ++ +G R + +
Sbjct: 551 HMLAVRSNGTVWAWGDNSSGQL--GDGTTINRATPVQVQVLSGIVAVAAGAAHSLAVRYD 608
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH--TAAISEGKILTW 344
G L+ WG N LG G+ P +VQG S V KH A +++G + W
Sbjct: 609 GTLWAWGINNTSQLGDGTGIPRLVPTQVQGIGSAVAVSAA----KHHSLAVLADGTL--W 662
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP----TIVNFGENVKALQVSCGFNHTGAL 399
WG ++ GQLG D P T+ E V S GF H+ AL
Sbjct: 663 DWGANN----------YGQLGRNQDNTNPTPSKVTTLTGVTEAVGTFGYSIGFGHSLAL 711
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 138/304 (45%), Gaps = 51/304 (16%)
Query: 68 FEKHSLKA---LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKK 123
F S +A +A ++L + G V+ G +S N Y + P ++ GL
Sbjct: 41 FTLQSAQARDRIAASSMNSLAIRSDGTVWTVGTRY-----VSANGWYRQDWPGQLPGLSG 95
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V I +G S A+ DG ++ WG+N +GQLG G + + P+ +V+ LSG+ T A
Sbjct: 96 -MVSIDSGDDFSMAVRSDGTVWAWGRNDDGQLGDGTLSTRGDPV--QVQGLSGVTT--VA 150
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
LG S+A+ G V +WGA G+LG G S + TP+++ L+ +V
Sbjct: 151 LGATHSLALCYDGSVWAWGANDHGQLGDGT---------SIARRTPQMVAGLQ--EVVAV 199
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLISG---------------- 286
AAG HS + +G V+ +G+ D L RR P I G
Sbjct: 200 AAGANHSLAVLSDGTVWAWGEN-YDGQLGDGTTVTRRVPVPIQGLSGIVAVASGTSHSLA 258
Query: 287 ----GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKI 341
G ++ WGSN +G LG GS SP +V S + V G ++ A+ +G +
Sbjct: 259 LRYDGNVWAWGSNYSGQLGDGSSLSRSSPVQVT---ELSGIVSVEGGPDYSMAVRYDGTV 315
Query: 342 LTWG 345
TWG
Sbjct: 316 WTWG 319
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 143/341 (41%), Gaps = 81/341 (23%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ ++RW P A ++ ++A G H+L + + G ++A G N GQ
Sbjct: 416 WGANNEGQLGDGTTKNRWAP----AEVLGNVVSVAAGRRHSLAVRDDGSLWAWGSNTVGQ 471
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ P+++ G+ + ++ G +S A+ D L+ WG+NS GQLG G
Sbjct: 472 LGDGTGSSRTI-PMQVPGISG-IASVAAGSDYSVALRYDRTLWAWGENSYGQLGDGTTVN 529
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ--------E 214
+ +PT+V+ LSGI A G +AV G V +WG SG+LG G +
Sbjct: 530 R--HVPTRVQGLSGIVA--IATGNGHMLAVRSNGTVWAWGDNSSGQLGDGTTINRATPVQ 585
Query: 215 SSILGF------------------------LRSTSEY-----TPRLIK-ELEGVKVKIA- 243
+L + +TS+ PRL+ +++G+ +A
Sbjct: 586 VQVLSGIVAVAAGAAHSLAVRYDGTLWAWGINNTSQLGDGTGIPRLVPTQVQGIGSAVAV 645
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------------------- 282
+A HS + +G ++ +G ++ + N PS
Sbjct: 646 SAAKHHSLAVLADGTLWDWGANNYGQLGRNQDNTNPTPSKVTTLTGVTEAVGTFGYSIGF 705
Query: 283 -----LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
L S G L WG N G LG G PE + P
Sbjct: 706 GHSLALRSDGYLVGWGHNTYGQLGTG------VPENIPVPV 740
>gi|270002031|gb|EEZ98478.1| hypothetical protein TcasGA2_TC000971 [Tribolium castaneum]
Length = 4191
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 169/363 (46%), Gaps = 68/363 (18%)
Query: 44 GNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
G G YGRLGLG ++ P ++ K L + HTL L ETG VY+ G D+G
Sbjct: 404 GKGSYGRLGLGESSNQSLPKRILLDCVVK-KLSSSKGSDGHTLALAETGVVYSWGDGDYG 462
Query: 102 QLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG N +P RI+G L K + I GY HS+A+T DG+LY WG+ +G+LG G
Sbjct: 463 KLG-HGNCATHKQPERITGPFLGKTIKYIHAGYRHSAAVTDDGKLYTWGEGDHGRLGHGD 521
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSIL 218
A+ +PT+V L+ + A G ++ V+ GK V S+G+G G+LG G+ +
Sbjct: 522 SNARY--VPTQVAGLAEV--GSVACGSSHTLVVSKDGKTVWSFGSGEHGKLGTGELGKV- 576
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
Y P++++ L+G+ ++ AG S
Sbjct: 577 --------YRPQVVEALQGLTIQKVCAGTWFSM--------------------------- 601
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSID-VLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
+L + GE+YTWGS LG GS D +++ P V+ VD +S G H A++
Sbjct: 602 ---ALTTAGEVYTWGS--GAILGKGSADAIVNLPMYVEDLAQYRIVD-ISAGDNHCLALT 655
Query: 338 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI-HPTIVNFGENVKALQVSCGFNH 395
E ++ W G +S GQ G G+ I P V E V Q+S G +H
Sbjct: 656 DEHEVFAW------------GTNSMGQCGQGHTCSPITRPLKVIGLEGVSIRQISAGTSH 703
Query: 396 TGA 398
+ A
Sbjct: 704 SMA 706
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 152/320 (47%), Gaps = 42/320 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V S+ + + LA H+L L E+G V++ G DF
Sbjct: 3382 GEGSYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAESGEVFSWGDGDF 3441
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ E VVQ++ G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 3442 GKLG-HGNPDRQRRPRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGKLGLGS 3500
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
A K +P +V L G Q A G + V T G V ++G G G+LG L
Sbjct: 3501 VANK--KLPERVMALEGYRIGQVACGLNHTACVSTDGMTVWTFGEGDYGKLG-------L 3551
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
G+ +T + P+ ++ + + +K G + + ++G+V++ G DR LF+E
Sbjct: 3552 GY--ATMKLLPQKVETVCNLGIKKVGCGTHLTLFLTKDGKVFVCGIDRMPWHSLFRE-RA 3608
Query: 278 ARRPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPERVQ 315
+P +++ G++ WG G LG+ + ++ PE +
Sbjct: 3609 VFKPQIMTSLSDYSIEDLAVGTEHVLFLTTCGKVLGWGMTGEGQLGLPHVSLVRHPEIIT 3668
Query: 316 GPFSESPVDQVSCGWKHTAA 335
S+ + Q+S G H+AA
Sbjct: 3669 E-LSDKGIRQISTGRTHSAA 3687
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 114/247 (46%), Gaps = 34/247 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G +R+ P + + + ++ACG +HTL +++ G V++ G + G
Sbjct: 509 WGEGDHGRLGHGDSNARYVPTQVAGLAE--VGSVACGSSHTLVVSKDGKTVWSFGSGEHG 566
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG E +G P + L+ +Q + G S A+T GE+Y WG S LG G
Sbjct: 567 KLGTGE-LGKVYRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWG--SGAILGKG-S 622
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A ++ +P VE L+ + G +A+T +V +WG G+ G G S +
Sbjct: 623 ADAIVNLPMYVEDLAQYRIVDISAGDNHCLALTDEHEVFAWGTNSMGQCGQGHTCSPIT- 681
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSA------------------CIDENGRVYIF 262
P + LEGV ++ +AG HS C+D + + +I
Sbjct: 682 -------RPLKVIGLEGVSIRQISAGTSHSMAWTSMSTENHHMTKHKPFCLDLHEKTFIL 734
Query: 263 GDRAVDK 269
+ ++K
Sbjct: 735 LKKFLEK 741
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 166/390 (42%), Gaps = 62/390 (15%)
Query: 40 AALWGNGDYGRLG-LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
A +WG+ +G+L LG S PV +F + + CG T + G V A G
Sbjct: 3329 AYMWGSDRHGQLAELGY--SASVPVQVESFSIA--RKIICGQNCTFVIQSDGTVLACGEG 3384
Query: 99 DFGQLGI-------SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
+G+LG S ++ SL+ I+ L V S G HS A+ GE++ WG
Sbjct: 3385 SYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVG--SDG--HSLALAESGEVFSWGDGD 3440
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
G+LG G + P ++E L Q A GF+ S VT GK+ ++G G G+LG
Sbjct: 3441 FGKLGHGNPDRQ--RRPRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGKLGL 3498
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGD------ 264
G + ++ P + LEG ++ A G H+AC+ +G V+ FG+
Sbjct: 3499 GSVA---------NKKLPERVMALEGYRIGQVACGLNHTACVSTDGMTVWTFGEGDYGKL 3549
Query: 265 ---RAVDKMLFQEGNHARRPSL--ISGGELYTWGSNENGCLGIGSIDVL--HSPERVQGP 317
A K+L Q+ + + G T ++G + + ID + HS R +
Sbjct: 3550 GLGYATMKLLPQKVETVCNLGIKKVGCGTHLTLFLTKDGKVFVCGIDRMPWHSLFRERAV 3609
Query: 318 F--------SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
F S+ ++ ++ G +H ++ GK+L WG G GQLG +
Sbjct: 3610 FKPQIMTSLSDYSIEDLAVGTEHVLFLTTCGKVLGWGMTGE------------GQLGLPH 3657
Query: 369 DVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
HP I+ + Q+S G H+ A
Sbjct: 3658 VSLVRHPEIITELSDKGIRQISTGRTHSAA 3687
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 159/364 (43%), Gaps = 63/364 (17%)
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGL 121
VCSA E S + + E VY G N QL G E I L P++ S +
Sbjct: 330 VCSAVETTSESEVG--------VYEKSDVYVWGSNSSHQLAEGNQEKI---LMPVK-SKM 377
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-LSGIFTK 180
+V Q+ G + + AI DG + GK S G+LGLG+ + + +P ++C + + +
Sbjct: 378 FTQVQQVEAGQYCTFAIHWDGSVSACGKGSYGRLGLGESSNQSLPKRILLDCVVKKLSSS 437
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
+ + G ++A+ G V SWG G G+LGHG +T + R+ G +
Sbjct: 438 KGSDG--HTLALAETGVVYSWGDGDYGKLGHGN--------CATHKQPERITGPFLGKTI 487
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS--------------- 285
K AG+ HSA + ++G++Y +G+ ++ + N P+ ++
Sbjct: 488 KYIHAGYRHSAAVTDDGKLYTWGEGDHGRLGHGDSNARYVPTQVAGLAEVGSVACGSSHT 547
Query: 286 ------GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG-WKHTAAISE 338
G ++++GS E+G LG G + ++ P+ V+ + +V G W A +
Sbjct: 548 LVVSKDGKTVWSFGSGEHGKLGTGELGKVYRPQVVEA-LQGLTIQKVCAGTWFSMALTTA 606
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGN-DVDYIHPTIVNFGENVKALQVSCGFNHTG 397
G++ TWG SG LG G+ D P V + + +S G NH
Sbjct: 607 GEVYTWG--------------SGAILGKGSADAIVNLPMYVEDLAQYRIVDISAGDNHCL 652
Query: 398 ALLE 401
AL +
Sbjct: 653 ALTD 656
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 112/257 (43%), Gaps = 57/257 (22%)
Query: 145 YMWGKNSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
YMWG + +GQL LG A+ +P +VE S ++ G + + G VL+ G
Sbjct: 3330 YMWGSDRHGQLAELGYSAS----VPVQVESFS--IARKIICGQNCTFVIQSDGTVLACGE 3383
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G GRLG G LHS + + + ++
Sbjct: 3384 GSYGRLGQGNSDD-------------------------------LHSLSVISSLQGFVIT 3412
Query: 264 DRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
D A G+ +L GE+++WG + G LG G+ D P +++ +E V
Sbjct: 3413 DLATSV-----GSDGHSLALAESGEVFSWGDGDFGKLGHGNPDRQRRPRQIEALQTEQVV 3467
Query: 324 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 382
QV+CG+KH+A + S+GK+ T+G +G F G+LG G+ + P V E
Sbjct: 3468 -QVACGFKHSAVVTSDGKLFTFG----NGDF--------GKLGLGSVANKKLPERVMALE 3514
Query: 383 NVKALQVSCGFNHTGAL 399
+ QV+CG NHT +
Sbjct: 3515 GYRIGQVACGLNHTACV 3531
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 116/228 (50%), Gaps = 18/228 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ + +P + F ++K + G H+ +T+ G +Y G D G
Sbjct: 456 WGDGDYGKLGHGNCATHKQPERITGPFLGKTIKYIHAGYRHSAAVTDDGKLYTWGEGDHG 515
Query: 102 QLGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGK 159
+LG + N Y P +++GL EV ++ G H+ ++ DG+ ++ +G +G+LG G+
Sbjct: 516 RLGHGDSNARYV--PTQVAGL-AEVGSVACGSSHTLVVSKDGKTVWSFGSGEHGKLGTGE 572
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P VE L G+ ++ G S+A+T G+V +WG+G LG G +I+
Sbjct: 573 LGK--VYRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWGSGAI--LGKGSADAIVN 628
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
P +++L ++ +AG H + + V+ +G ++
Sbjct: 629 L--------PMYVEDLAQYRIVDISAGDNHCLALTDEHEVFAWGTNSM 668
>gi|326913438|ref|XP_003203045.1| PREDICTED: hypothetical protein LOC100541592 [Meleagris gallopavo]
Length = 1302
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 141/272 (51%), Gaps = 22/272 (8%)
Query: 22 SKLGICKR--WISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALAC 78
+KL +C R + T A GNG+ G+LGLG E R + S F +H +K LA
Sbjct: 106 TKLAVCGRNHTLVYTENGNMYAAGGNGE-GQLGLGDTEERTTFHLISFFTNQHKIKQLAA 164
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
G + +TE G ++ G N GQ+G+++ S+ P ++ + K + IS GY+HS+ I
Sbjct: 165 GSYTSAAVTEDGQLFVWGDNSEGQIGLADKTYVSV-PCQVD-VGKPISSISCGYYHSAFI 222
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGG 196
T DGELY +G+ NG+LGL + K +P V GI K + A G E +V +T G
Sbjct: 223 TGDGELYTFGEPENGKLGLLPEQLKNSRVPQPV---LGIMEKVNKVACGGEHTVVLTETG 279
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
V ++G G G+LGHG L TS P+ +K L K++ G H+A I EN
Sbjct: 280 -VYTFGLGQYGQLGHGT------LLFKTS--VPKSVKHLRKCKIRNITCGESHTAVIAEN 330
Query: 257 GRVYIFGDRAVDKMLFQEGNHARR--PSLISG 286
G ++ FGD K+ E N A + P+L S
Sbjct: 331 GLMFTFGDGRHGKLGLGEENFANQFDPALCSN 362
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 150/325 (46%), Gaps = 52/325 (16%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + + V IS G H++ +T +G+LYM+G N GQLGLG
Sbjct: 34 FGKSNFAENI-----PSKFWFRNDKPVHISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGS 88
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + PT V+ L TK A G ++ T G + + G G G+LG G
Sbjct: 89 K--NTVHKPTCVKALKPEKTKLAVCGRNHTLVYTENGNMYAAGGNGEGQLGLGDTEERTT 146
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F S +T + K+K AAG SA + E+G+++++GD + ++ + +
Sbjct: 147 F-HLISFFTNQH-------KIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTYVS 198
Query: 280 RP-------------------SLISG-GELYTWGSNENGCLGIGSIDVLHS--PERVQGP 317
P + I+G GELYT+G ENG LG+ + +S P+ V G
Sbjct: 199 VPCQVDVGKPISSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGI 258
Query: 318 FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PT 376
+ V++V+CG +HT ++E + T+G G GQLGHG + P
Sbjct: 259 MEK--VNKVACGGEHTVVLTETGVYTFGLG------------QYGQLGHGTLLFKTSVPK 304
Query: 377 IVNFGENVKALQVSCGFNHTGALLE 401
V K ++CG +HT + E
Sbjct: 305 SVKHLRKCKIRNITCGESHTAVIAE 329
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F ++ +ACGG H L
Sbjct: 336 FGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACGGCHMLVF 381
>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
Length = 2660
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 178/387 (45%), Gaps = 57/387 (14%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 1802 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 1859
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ + +++ P + L+ V+ +++G H A+T +GE+Y WG+ +G+LG
Sbjct: 1860 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 1918
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 1919 GNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 1972
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 1973 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 2027
Query: 276 NHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + P +L G +YTWG + LG GS+D + P++
Sbjct: 2028 DGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKK 2087
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V + ++ G H A S+ G++ TW G + GQLG G
Sbjct: 2088 VAA-LQGKKIISIATGSLHCVACSDSGEVYTW------------GDNDEGQLGDGTVTAI 2134
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGAL 399
P +V + ++V+CG HT AL
Sbjct: 2135 QRPRLVAALQGKHIVKVTCGSAHTLAL 2161
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 137/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 843 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 902
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L + VVQ++ G + A+T DG ++ WG G+LG G
Sbjct: 903 LGHGDN-ATQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 961
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 962 SEGS--DTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 1017
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ I L G +V A G LH + + G+V
Sbjct: 1018 -------RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV-------------------- 1050
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
Y WG N++G G G+ V P V G V++V+CG H+ A
Sbjct: 1051 ----------YAWGDNDHGQQGSGNTFVNKKPALVIG-LDAVFVNRVACGSSHSIA 1095
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 134/303 (44%), Gaps = 48/303 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + S+ +ACG AH+ +T +G V G +G+
Sbjct: 1908 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 1967
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + + +G + IT D ++ WG G+LG G
Sbjct: 1968 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 2025
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 2026 -GSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 2082
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P+ + L+G K+ A G LH AC D
Sbjct: 2083 -------RRPKKVAALQGKKIISIATGSLHCVACSD------------------------ 2111
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
GE+YTWG N+ G LG G++ + P R+ + +V+CG HT A+S
Sbjct: 2112 -------SGEVYTWGDNDEGQLGDGTVTAIQRP-RLVAALQGKHIVKVTCGSAHTLALST 2163
Query: 339 GKI 341
++
Sbjct: 2164 SQL 2166
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 150/351 (42%), Gaps = 79/351 (22%)
Query: 92 VYATGLNDFGQLG-----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
V GLND QLG S+ I L P+ I+G K + +S
Sbjct: 734 VMVWGLNDKEQLGGLKGSKVKVPTFSQTIS-RLRPIHIAGGSKSLFIVSQ---------- 782
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
DG++Y G+ +NG+LGLG +P+P ++ L K+ A+ G + ++A+T GKV
Sbjct: 783 DGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 840
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG +++ PRL++ L K++ A G HSA I G
Sbjct: 841 FSWGEGEDGKLGHGNRTTL---------DKPRLVEALRAKKIRDVACGSSHSAAISSQGE 891
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISG------------------------GELYTWGS 294
+Y +G ++ + +P L++ G +++WG
Sbjct: 892 LYTWGLGEYGRLGHGDNATQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGD 951
Query: 295 NENGCLGIG---SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 350
+ G LG G D H ER+ G V Q+ CG + + A++ G++ TWG G +
Sbjct: 952 GDFGKLGRGGSEGSDTPHEIERLSG----IGVVQIECGAQFSLALTRAGEVWTWGKGDYY 1007
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHG D P + + + V+ G H A+ +
Sbjct: 1008 ------------RLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTD 1046
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 158/349 (45%), Gaps = 54/349 (15%)
Query: 79 GGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF+ ++ G VYA G G+LG+ L P ++ L + VV+ + +G H
Sbjct: 772 GGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 830
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+T+DG+++ WG+ +G+LG G + + P VE L + A G S A++
Sbjct: 831 ALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVEALRAKKIRDVACGSSHSAAISS 888
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG ++ L P+L+ L G +V A G +
Sbjct: 889 QGELYTWGLGEYGRLGHGDNATQL---------KPKLVTALAGRRVVQVACGSRDAQTLA 939
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRP----------------------SLISGGELY 290
+ E+G V+ +GD K+ + P +L GE++
Sbjct: 940 LTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVW 999
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG G + P+ + G V V+ G H A+++ G++ WG
Sbjct: 1000 TWGKGDYYRLGHGGDQHVRKPQPIGG-LRGRRVIHVAVGALHCLAVTDAGQVYAWG---- 1054
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G GN P +V + V +V+CG +H+ A
Sbjct: 1055 -----DNDH---GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 1095
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 124/335 (37%), Gaps = 105/335 (31%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG------------------ 185
+Y WG N GQLG G + ++ I PT E LS + Q A G
Sbjct: 1799 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 1856
Query: 186 --------------------------FEQSVAVTGGGK----------VLSWGAGGSGRL 209
F + VAV GGK V +WG G G+L
Sbjct: 1857 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 1916
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S P+L++ L G+ V A G HSA I +G V +G +
Sbjct: 1917 GHGNRMSY---------DRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 1967
Query: 270 MLFQEGNHARRPSLISG------------------------GELYTWGSNENGCLGIGSI 305
+ + RP L+ +++WG + G LG G
Sbjct: 1968 LGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 2027
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 364
D P +++ + V +V CG + + A+++ G + TWG G H +L
Sbjct: 2028 DGCKLPYKIES-LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFH------------RL 2074
Query: 365 GHGNDVDYI-HPTIVNFGENVKALQVSCGFNHTGA 398
GHG+ VD++ P V + K + ++ G H A
Sbjct: 2075 GHGS-VDHVRRPKKVAALQGKKIISIATGSLHCVA 2108
>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
Length = 1058
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 153/362 (42%), Gaps = 57/362 (15%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG +E P ++K +ACG HTLFLT +G VYA G ND
Sbjct: 10 WGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGRVYACGSNDH 69
Query: 101 GQLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + PL I L VVQI+ G HS A++ G++ WG N GQLG
Sbjct: 70 SQLGHDLP---TKRPLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWGDNDCGQLGQAT 126
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ +P V L Q A G S+A+T G++ SWG+ G+LG +
Sbjct: 127 D-QDIVQLPKIVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNTPKEV-- 183
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
T P + L G+ V A G HS I ++ V FG
Sbjct: 184 ----THSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAV--FG---------------- 221
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
WG N G LG+ P +++ V V+CG + + ++ E
Sbjct: 222 ------------WGRNNCGQLGLNDETSRSYPTQLKT-LRTLGVRFVACGDEFSVFLTNE 268
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T G G GQLGHG + + P +V QV+CG HT A
Sbjct: 269 GGVFTCGAGAY------------GQLGHGFGANEMLPRMVMELMGSTITQVACGNRHTLA 316
Query: 399 LL 400
L+
Sbjct: 317 LV 318
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 123/280 (43%), Gaps = 47/280 (16%)
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+T ELY WG S+GQLGLG + I P++V KQ A G ++ +T G+
Sbjct: 1 MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGR 60
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V + G+ +LGH + P LI EL V A G HS + E G
Sbjct: 61 VYACGSNDHSQLGHDLPTK-----------RPLLIPELLDYVVVQIACGSRHSMALSEWG 109
Query: 258 RVYIFGD-------RAVDKMLFQEGNHARR----------------PSLISGGELYTWGS 294
+V +GD +A D+ + Q R+ +L S GELY+WGS
Sbjct: 110 QVLSWGDNDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLALTSCGELYSWGS 169
Query: 295 NENGCLGIGSI-DVLHSPERVQ-GPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT 352
N G LG+ + +V HS + V+ PV ++CG H+ IS+ + +GW
Sbjct: 170 NIYGQLGVNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAV-FGW------ 222
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
G ++ GQLG ++ +PT + + V+CG
Sbjct: 223 ----GRNNCGQLGLNDETSRSYPTQLKTLRTLGVRFVACG 258
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL SR P ++ +ACG ++FLT G V+ G +GQ
Sbjct: 222 WGRNNCGQLGLNDETSRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
LG L + + + + Q++ G H+ A+ G +Y +G S+GQ LG ++
Sbjct: 282 LGHGFGANEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQ--LGTRS 339
Query: 162 AKVIPIPTKV 171
K + +P V
Sbjct: 340 TKSLTLPQVV 349
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 14/121 (11%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS-ESPVDQVSCGWKHTAAISEGKI 341
+ +G ELY WG+ +G LG+G I+ Q P++ +S + QV+CG +HT ++
Sbjct: 1 MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLT---- 56
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
S G G + QLGH D+ P ++ + +Q++CG H+ AL E
Sbjct: 57 -------SSGRVYACGSNDHSQLGH--DLPTKRPLLIPELLDYVVVQIACGSRHSMALSE 107
Query: 402 Y 402
+
Sbjct: 108 W 108
>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis niloticus]
Length = 4833
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 138/301 (45%), Gaps = 46/301 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T +G ++ G +G+
Sbjct: 4062 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGR 4121
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 4122 LGHGDSED-QLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG- 4179
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ IP K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4180 -GSDGCKIPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4236
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4237 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4267
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ +++V+CG HT A S
Sbjct: 4268 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACGSAHTLAWSTS 4318
Query: 340 K 340
K
Sbjct: 4319 K 4319
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 139/303 (45%), Gaps = 44/303 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y+ GL ++G+
Sbjct: 3068 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3127
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
LG +N L L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3128 LGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKLGRG-- 3185
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ +P +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3186 GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV--- 3242
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P++++ L G K+ A G LH + + G+VY
Sbjct: 3243 ------RKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVY-------------------- 3276
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
WG N++G G G+ V P VQG + +V+CG H+ A +
Sbjct: 3277 ----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTVD 3325
Query: 341 ILT 343
+ T
Sbjct: 3326 VTT 3328
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 154/337 (45%), Gaps = 50/337 (14%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2958 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEAT 3017
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + IPIP ++ LS K+ A+ G ++A+T GKV SWG G G+L
Sbjct: 3018 NGRLGLGLSSG-TIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3076
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G +
Sbjct: 3077 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3127
Query: 270 MLFQEGNHARRPSLI------------------------SGGELYTWGSNENGCLGIGSI 305
+ + RP L+ G +++WG + G LG G
Sbjct: 3128 LGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKLGRGGS 3187
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 364
+ + P+ ++ + V Q+ CG + + A+++ G + TWG G +L
Sbjct: 3188 EGCNVPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3234
Query: 365 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GHG DV P +V K + V+ G H A+ +
Sbjct: 3235 GHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTD 3271
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 171/387 (44%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG +E V S +L+ + GG TLF +T G +YATG
Sbjct: 3956 WGHNHRGQLG--GIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4013
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ ++K V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4014 GRLGIGGTESVSTPTLLESIQHVFIRK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4071
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L G+ A G S +T G++ +WG G GRLGHG
Sbjct: 4072 HGNRSP--CDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGD--- 4126
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L+ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4127 ------SEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG 4180
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4181 SDGCKIPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4240
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4241 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4287
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4288 IQRPRLVAALQGKKINRVACGSAHTLA 4314
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 90/164 (54%), Gaps = 4/164 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E + P+V +AF+ + +ACG A TL +TE G V++ G D+
Sbjct: 566 WGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDY 625
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + G L ++V++ G S A+T DG++Y WGK N +LG G
Sbjct: 626 GKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD 685
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + P ++ L G A+G +A+T G+VLSWG+
Sbjct: 686 --EHVRYPKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSWGSN 727
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 133/319 (41%), Gaps = 54/319 (16%)
Query: 62 PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
P++ + LA G H L L+ G V++ G D G+LG + Y EP I
Sbjct: 475 PMLIHVLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTT-YLEEPKMIG 533
Query: 120 GLK-----KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
K VV ++ G +S+AIT DGELY WG+ + G+LG G + P+ V
Sbjct: 534 TFNGKQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPM--VVTAF 591
Query: 175 SGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
G+ A G Q++AVT G+V SWG G G+LG G S TP+L+
Sbjct: 592 KGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLV 642
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG------ 286
++L+ + + G S + ++G+VY +G ++ H R P L+
Sbjct: 643 EKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKV 702
Query: 287 ----------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 330
GE+ +WGSN+ + D L S ++ P
Sbjct: 703 VDVAVGSTHCLALTDDGEVLSWGSNDK----LQHFDTLFSNKK-------QPKALPGLNS 751
Query: 331 KHTAAISEGKILTWGWGGS 349
KH IS G ++ W S
Sbjct: 752 KHIVGISCGPGQSFAWSSS 770
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 107/228 (46%), Gaps = 19/228 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + F KH + +ACG ++ +T G +Y G
Sbjct: 510 WGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVVH-VACGSTYSAAITADGELYTWGR 568
Query: 98 NDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
++G+L G SE+ + GLK V +G + A+T +G+++ WG G+L
Sbjct: 569 GNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKL 628
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + P VE L + + G + SVA+T G+V +WG G + RLGHG +
Sbjct: 629 GRG--GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDE 686
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L+ L+G KV A G H + ++G V +G
Sbjct: 687 HV---------RYPKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSWG 725
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 149/351 (42%), Gaps = 77/351 (21%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C A + + C L L+ +G VY+ +L P+ I L
Sbjct: 433 PIQCKALSSLGVTQIVCSEKGFLILSSSGAVYSQNYK-----------STTLAPMLIHVL 481
Query: 122 K-KEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+++V+++ H A++ +GE++ WG G+LG G + P + +G
Sbjct: 482 SSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTT--YLEEPKMIGTFNG-- 537
Query: 179 TKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
KQA A G S A+T G++ +WG G GRLGHG S + TP +
Sbjct: 538 -KQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGS---------SEDQTTPMV 587
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYT 291
+ +G+KV A G GD A+ ++ G++++
Sbjct: 588 VTAFKGLKVVDVACGS---------------GD-------------AQTLAVTENGQVWS 619
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSH 350
WG + G LG G D +P+ V+ + + +V CG + + A++ +G++ TWG G +
Sbjct: 620 WGDGDYGKLGRGGSDGCKTPKLVEK-LQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQ 678
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHG D +P +++ + K + V+ G H AL +
Sbjct: 679 ------------RLGHGTDEHVRYPKLLDSLQGKKVVDVAVGSTHCLALTD 717
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 114/258 (44%), Gaps = 52/258 (20%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2950 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3007
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GK+ + G +GRLG G S + PR I L +K A +HS
Sbjct: 3008 GKIYACGEATNGRLGLGLSSGTIPI--------PRQITALSNYVIKKVA---VHSG---- 3052
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3053 -------------------GRHAM--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3091
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AAI S G++ +WG G G+LGHG++ +
Sbjct: 3092 A-LKTKRIRDIACGSSHSAAITSSGELYSWGLG------------EYGRLGHGDNTTQLR 3138
Query: 375 PTIVNFGENVKALQVSCG 392
P +V + +QV+CG
Sbjct: 3139 PKLVKVLLGHRVIQVACG 3156
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 113/252 (44%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3951 GTIYGWGHNHRGQLG-GIEGAKV-KVPTSTEALATLRPVQLIGGEQTLFAVTADGKLYAT 4008
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V F+ ++ G+ +
Sbjct: 4009 GYGAGGRLGIGGTESV---------STPTLLESIQHV--------FIRKVAVNSGGKHCL 4051
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4052 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVE 4091
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD ++ G H+A I+ G++ TWG G G+LGHG+ D + P +V+
Sbjct: 4092 VVD-IAAGGAHSACITASGELFTWGKG------------RYGRLGHGDSEDQLKPKLVDA 4138
Query: 381 GENVKALQVSCG 392
+ + + V+CG
Sbjct: 4139 LQGHRVIDVACG 4150
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY G D +
Sbjct: 620 WGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQR 679
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
L G E++ Y P + L+ K+VV ++ G H A+T DGE+ WG N Q L
Sbjct: 680 LGHGTDEHVRY---PKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSWGSNDKLQHFDTL 736
Query: 156 GLGKKAAKVIP 166
KK K +P
Sbjct: 737 FSNKKQPKALP 747
>gi|89273844|emb|CAJ81935.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus (Silurana) tropicalis]
Length = 526
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 140/310 (45%), Gaps = 49/310 (15%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
+ G G LG G +S P + +L+ G G H + +T G VY+ G N +
Sbjct: 44 VMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAY 103
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG + + +L P ++S + K+ + ++ G HHS +T DGE+Y WG N++GQ+G G
Sbjct: 104 SQLG-NGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSG 162
Query: 159 KKAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
A + PIP KV CL A G S+AV G+V +WG G+G+LG G
Sbjct: 163 STANQ--PIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGS---- 216
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S ++ TP I L+G++V+ G+ H+
Sbjct: 217 -----SGNQPTPCRIAALQGIRVEQVVCGYAHTL-------------------------- 245
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 336
+L G +Y WG+N G LG G+ P +V E V+ +C HT+A
Sbjct: 246 ----ALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVD-KERIVEIAACHSSHTSAAK 300
Query: 337 -SEGKILTWG 345
G++ WG
Sbjct: 301 SQSGQVYMWG 310
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 138/326 (42%), Gaps = 62/326 (19%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSS 136
G L+LT+ V+ G N G LG + +EP RI L K +V +S G H
Sbjct: 29 AGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSI-IEPRRIDMLSGKRIVSLSYGSGPHVV 87
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVAVT 193
+T DGE+Y WG N+ QLG G + P + + K+A A G S+ +T
Sbjct: 88 IVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVS----TNLINKKAISVACGSHHSMVLT 143
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSAC 252
G+V +WG SG++G G + ++ PR + L+ V A G + S
Sbjct: 144 CDGEVYAWGYNNSGQVGSGS---------TANQPIPRKVTSCLQNKTVIGIACGQMSSMA 194
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ +NG E+Y WG N NG LG+GS +P
Sbjct: 195 VVDNG------------------------------EVYAWGYNGNGQLGLGSSGNQPTPC 224
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
R+ V+QV CG+ HT A+++ ++ + WG +S GQLG GN +
Sbjct: 225 RI-AALQGIRVEQVVCGYAHTLALTDEGVM-YAWGA----------NSYGQLGTGNKSNQ 272
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGA 398
+P V + +C +HT A
Sbjct: 273 SYPVQVIVDKERIVEIAACHSSHTSA 298
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 111/268 (41%), Gaps = 58/268 (21%)
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTG 194
+T + E+++ G NS+G LG G A+ I P +++ LSG + +L + V VT
Sbjct: 36 LTKNDEVFVMGTNSSGCLGTGD--AQSIIEPRRIDMLSG--KRIVSLSYGSGPHVVIVTS 91
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G+V SWG +LG+G + L S + + LI + K A G HS
Sbjct: 92 DGEVYSWGHNAYSQLGNGSTNQAL----SPCQVSTNLINK----KAISVACGSHHSMV-- 141
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
L GE+Y WG N +G +G GS P +V
Sbjct: 142 ----------------------------LTCDGEVYAWGYNNSGQVGSGSTANQPIPRKV 173
Query: 315 QGPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
V ++CG + A + G++ WG+ G+ GQLG G+ +
Sbjct: 174 TSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGN------------GQLGLGSSGNQP 221
Query: 374 HPTIVNFGENVKALQVSCGFNHTGALLE 401
P + + ++ QV CG+ HT AL +
Sbjct: 222 TPCRIAALQGIRVEQVVCGYAHTLALTD 249
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLGS ++ P +A + ++ + CG AHTL LT+ G +YA G N +GQ
Sbjct: 204 WGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQ 263
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG S P+++ K+ +V+I+ + H S+A + G++YMWG+ GQ
Sbjct: 264 LGTGNKSNQSY-PVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWGQ-CRGQ------ 315
Query: 161 AAKVIPIPTKVECLSGIF 178
+ + P T C +F
Sbjct: 316 -SVITPHLTHFSCTDDVF 332
>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
Length = 1983
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 124/439 (28%), Positives = 191/439 (43%), Gaps = 72/439 (16%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR 61
+GR L + +Y K+ + + KR+ WG G GRLG G
Sbjct: 1144 IGRILQCLVRYSEKKHFE-QIRDRANKRYEVDLEGEYHIYTWGCGVNGRLGHGFHTGYST 1202
Query: 62 PVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN-----IGYSLEP 115
P ++F ++ + +ACG H+L + G VYA G D GQLG EN I Y+ P
Sbjct: 1203 PQEITSFPSNTKIVEVACGCEHSLARSFDGGVYAWGAGDRGQLGSLENFDCVKINYAFNP 1262
Query: 116 LRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
+ LK+ ++ I+ G H+ +T + ++ WG GQLGL +K P V+ L
Sbjct: 1263 QPVLNLKRYFILSIACGRWHNMTLTSERQVLSWGAGEFGQLGLDHNLSK--GTPQMVKAL 1320
Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK- 233
G + G S A+ GK+L WG G+LGHG S PR+ +
Sbjct: 1321 DGRAPCKILCGGWHSAAILESGKILLWGKNVYGQLGHGDTKSC---------SAPRVNQY 1371
Query: 234 -ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML---------------FQEGNH 277
LEG KV+ A G H+ + +V+ G +D L +E N
Sbjct: 1372 LRLEG-KVRTAGLGANHTLVVMVANKVFAMGSN-IDGQLGLDDPSRTGKNVPVSIEELNG 1429
Query: 278 ARRPSLISG----------GELYTWGSNENGCLGIGSIDVLHSP----ERVQGPFSESPV 323
+ +G GE+++WG + G LG +I +P ER + P V
Sbjct: 1430 KNICQVAAGDQHSLALSVFGEVWSWGGSPFGQLGHETITDKLAPTPLLERHKIP---PDV 1486
Query: 324 DQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFG 381
++CG+ +AA+S +G++ TWG G S G+LGH V P+++ +F
Sbjct: 1487 KSIACGYTFSAAMSAKGEVFTWGNGES------------GELGHAPKVLTYAPSLIKDFS 1534
Query: 382 ENVKALQVSCGFNHTGALL 400
E V Q++CGF H ++
Sbjct: 1535 EVV---QIACGFKHMAGIV 1550
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 150/359 (41%), Gaps = 58/359 (16%)
Query: 4 RSLTAMTKYY--LKQDIKLGSKLGICKRWISST--LQRRFAALWGNGDYGRLGLGSLESR 59
R +T Y L ++ G + KR+I LQ +WG+G+ G+LG S E +
Sbjct: 52 REAALVTDYRTELPEEESEGYDYHMEKRYIRENIELQGSHVFMWGDGENGKLGNQSEEIQ 111
Query: 60 WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENI----GYSLEP 115
P + AF +K A G HTLFL+ G V + G N +GQLG+ +++ EP
Sbjct: 112 HVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSCGSNVYGQLGMGDHMLSRSTPVSEP 171
Query: 116 LRISGLKK---------EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
+ L K +V I+ GY+HS A+ G+++ WG S G+LG+G A
Sbjct: 172 SKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANA--E 229
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P V L A G + A+T G V +WG G G+LGH E
Sbjct: 230 SPRFVASLQNSKVVHIACGAHHTAAITTVGDVWTWGKGLRGQLGHKS---------VKEE 280
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
++PRL L + G H+ I +
Sbjct: 281 FSPRLNASLRKCGAQKIRCGDDHTLVI------------------------------LRS 310
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 345
G+LY+ G+N +G LG+G P V G +E +D + G + A + GK+ +G
Sbjct: 311 GQLYSMGANTHGQLGLGDATDRIIPTLVTGFANEKVIDIDAKGCRSIALTNTGKVFAFG 369
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 135/301 (44%), Gaps = 50/301 (16%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G ++GRLGLG + PV + + +ACG H L LTE VYA G +G
Sbjct: 1668 GGSEHGRLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNA 1727
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+S N LEP +S L ++ + G HS+A++ G+L+MWGKNSNGQLGLG +A
Sbjct: 1728 GVS-NTNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSA 1786
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAV--TGGGKVLSWGAGGSGRLGHGQESSILGF 220
PTK+ L G+ +LG S + + + G +G+LG LG
Sbjct: 1787 -AEDSPTKISNLDGVVM-DVSLGANHSAVLMQVTSPNLFTCGLNANGQLG-------LGD 1837
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S T + L+ ++ A+ G H+A + +
Sbjct: 1838 FVDRSTLTA--VDALDDRQIVSASCGAAHTAAVSQY------------------------ 1871
Query: 281 PSLISGGELYTWGSNENGCLGI--GSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAIS 337
G+L TWG+ NG LG+ G + +P VQ P P+ +V CG + T +S
Sbjct: 1872 ------GDLITWGNGRNGQLGLKAGLSKDIENP--VQLPAICNDPMVKVVCGQEVTIVVS 1923
Query: 338 E 338
E
Sbjct: 1924 E 1924
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 145/332 (43%), Gaps = 51/332 (15%)
Query: 43 WGNGDYGRLGLG-----SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+G G +GRLG G S ES P K S+ +ACG T LT+TG VY G
Sbjct: 520 YGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKVYTWGK 579
Query: 98 NDFGQLGISENIGYSLE-PLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQL 155
+ G+LG+ ++ P + L VV QIS G +H++ T + ++WG N+ GQL
Sbjct: 580 SAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGSNTFGQL 639
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G+ + +P P ++ L + A G ++ T G V+S G G G+LGHG
Sbjct: 640 GI-PHISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGKGWHGQLGHGDYE 698
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S L + S+ P K +EG FGD + K+ +
Sbjct: 699 S----LTALSKTLPYFKKIVEG------------------------FGDSFIVKVSAGKE 730
Query: 276 NHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
+ A ++ + G L+TWG + LG S P V+ F++ V VS G H A
Sbjct: 731 SSA---AITNKGRLFTWGKGDEYQLGHESSKNEAYPREVEF-FAKIRVVDVSIGDSHMLA 786
Query: 336 ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
+ L + WG + S GQLGHG
Sbjct: 787 LDYSG-LPYSWG----------NGSAGQLGHG 807
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 144/321 (44%), Gaps = 45/321 (14%)
Query: 31 ISSTLQRRFAAL--WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
S++ Q+R + WG G+LG+ L++ P + + S+ ++ + F+T+
Sbjct: 1601 FSASNQKRHGCVFVWGEDTCGQLGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTD 1660
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
+G +Y +G ++ G+LG+ ++ + P+ I L ++++++ G +H A+T + +Y W
Sbjct: 1661 SGSLYVSGGSEHGRLGLG-HMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAW 1719
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G G G+ + P ++ L+ G S A++ G + WG +G
Sbjct: 1720 GDGKWGNAGVSN--TNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNG 1777
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LG G S+ +E +P I L+GV + + + G HSA + +
Sbjct: 1778 QLGLGTTSA--------AEDSPTKISNLDGVVMDV-SLGANHSAVLMQ------------ 1816
Query: 268 DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
++ L+T G N NG LG+G V S + + S
Sbjct: 1817 ----------------VTSPNLFTCGLNANGQLGLGDF-VDRSTLTAVDALDDRQIVSAS 1859
Query: 328 CGWKHTAAISE-GKILTWGWG 347
CG HTAA+S+ G ++TWG G
Sbjct: 1860 CGAAHTAAVSQYGDLITWGNG 1880
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 101/205 (49%), Gaps = 17/205 (8%)
Query: 18 IKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRW-RPVVCSAFEKHSLKAL 76
I LG C S+ + + F +WG+ +G+LG+ + S P ++ + +++++
Sbjct: 612 ISLGRNHAAC----STDMHKFF--VWGSNTFGQLGIPHISSYMPDPYEITSLREANIRSI 665
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV--------VQI 128
ACGG HTL T TG V + G GQLG + + + KK V V++
Sbjct: 666 ACGGWHTLISTNTGSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKV 725
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G S+AIT G L+ WGK QLG +++K P +VE + I ++G
Sbjct: 726 SAGKESSAAITNKGRLFTWGKGDEYQLG--HESSKNEAYPREVEFFAKIRVVDVSIGDSH 783
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQ 213
+A+ G SWG G +G+LGHG+
Sbjct: 784 MLALDYSGLPYSWGNGSAGQLGHGE 808
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 136/316 (43%), Gaps = 49/316 (15%)
Query: 90 GCVYATGLNDFGQLGISENIGYSLE----PLRISGLKK-EVVQISTGYHHSSAITVDGEL 144
G +Y G FG+LG S E P RI L K VV I+ G ++A+T G++
Sbjct: 515 GYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKV 574
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
Y WGK++ G+LGLG I +P V+ LS Q +LG + T K WG+
Sbjct: 575 YTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGSN 634
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LG SS + P I L ++ A G H+ G V G
Sbjct: 635 TFGQLGIPHISSYMP--------DPYEITSLREANIRSIACGGWHTLISTNTGSVMSCG- 685
Query: 265 RAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 324
+G H G+L G + L S + + + V+G F +S +
Sbjct: 686 ---------KGWH---------GQL---GHGDYESLTALSKTLPYFKKIVEG-FGDSFIV 723
Query: 325 QVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 383
+VS G + +AAI+ +G++ TWG G + QLGH + + +P V F
Sbjct: 724 KVSAGKESSAAITNKGRLFTWGKGDEY------------QLGHESSKNEAYPREVEFFAK 771
Query: 384 VKALQVSCGFNHTGAL 399
++ + VS G +H AL
Sbjct: 772 IRVVDVSIGDSHMLAL 787
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 160/391 (40%), Gaps = 58/391 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT---LFLTETGCVYATGLND 99
WGNG+ G LG + P + F + + +ACG H +F + TG ++
Sbjct: 1508 WGNGESGELGHAPKVLTYAPSLIKDFSE--VVQIACGFKHMAGIVFKPRMKTIELTGSSN 1565
Query: 100 FGQLGISENIGYSLEPLRISG----LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G S S+ +SG T +S G +++WG+++ GQL
Sbjct: 1566 IGD--NSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSAFSASNQKRHGCVFVWGEDTCGQL 1623
Query: 156 GL-GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
G+ G +AA+ P+ ++ L + + S VT G + G GRLG G
Sbjct: 1624 GIRGLQAARS---PSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSGGSEHGRLGLGHM 1680
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD---------R 265
+ TP I+ L VK+ A G H + E RVY +GD
Sbjct: 1681 AP---------APTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNAGVSN 1731
Query: 266 AVDKMLFQE----------GNHA---RRPSLISGGELYTWGSNENGCLGIGSIDVLH-SP 311
D + QE G HA +L G+L+ WG N NG LG+G+ SP
Sbjct: 1732 TNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSAAEDSP 1791
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
++ + V VS G H+A + + S F+ G ++ GQLG G+ VD
Sbjct: 1792 TKISN--LDGVVMDVSLGANHSAVLMQVT--------SPNLFT-CGLNANGQLGLGDFVD 1840
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGALLEY 402
T V+ ++ + + SCG HT A+ +Y
Sbjct: 1841 RSTLTAVDALDDRQIVSASCGAAHTAAVSQY 1871
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 121/295 (41%), Gaps = 54/295 (18%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++MWG NG+LG ++ ++ +P V + K ALG + ++ ++ G VLS G+
Sbjct: 92 VFMWGDGENGKLG--NQSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSCGS 149
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA--------AAGFLHSACIDE 255
G+LG G RST P K L+ ++ I AAG+ HS +++
Sbjct: 150 NVYGQLGMGDHM----LSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALND 205
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELYTWG 293
G+++ +G + K+ +A P ++ G+++TWG
Sbjct: 206 TGKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVGDVWTWG 265
Query: 294 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTF 353
G LG S+ SP R+ + ++ CG HT I G
Sbjct: 266 KGLRGQLGHKSVKEEFSP-RLNASLRKCGAQKIRCGDDHTLVILRS-----------GQL 313
Query: 354 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV------SCGFNHTGALLEY 402
G ++ GQLG G+ D I PT+V N K + + S +TG + +
Sbjct: 314 YSMGANTHGQLGLGDATDRIIPTLVTGFANEKVIDIDAKGCRSIALTNTGKVFAF 368
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 117/254 (46%), Gaps = 19/254 (7%)
Query: 31 ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
++ T ++R A WG+G +G G+ + P S+ S+ + GG H+ L++ G
Sbjct: 1708 LALTEEKRVYA-WGDGKWGNAGVSNTNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYG 1766
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI--TVDGELYMWG 148
++ G N GQLG+ P +IS L V+ +S G +HS+ + L+ G
Sbjct: 1767 DLFMWGKNSNGQLGLGTTSAAEDSPTKISNLDGVVMDVSLGANHSAVLMQVTSPNLFTCG 1826
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
N+NGQLGLG + T V+ L A+ G + AV+ G +++WG G +G+
Sbjct: 1827 LNANGQLGLGDFVDR--STLTAVDALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQ 1884
Query: 209 LG--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
LG G I ++ + ++K + G +V I + E G +Y+ G
Sbjct: 1885 LGLKAGLSKDIENPVQLPAICNDPMVKVVCGQEVTIV---------VSEKGELYMAG--- 1932
Query: 267 VDKMLFQEGNHARR 280
+ + GN +RR
Sbjct: 1933 YESTIGLGGNSSRR 1946
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 113/256 (44%), Gaps = 31/256 (12%)
Query: 44 GNGDYGRLGLGS-LESRWRPVVCSAFEK------------HSLKALACGGAHTLFLTETG 90
G+ YG+LG+G + SR PV + +K +++ +A G H+L L +TG
Sbjct: 148 GSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTG 207
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
+++ G +G+LGI + S +VV I+ G HH++AIT G+++ WGK
Sbjct: 208 KIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVGDVWTWGKG 267
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
GQ LG K+ K P L ++ G + ++ + G++ S GA G+LG
Sbjct: 268 LRGQ--LGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQLG 325
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G +T P L+ KV A S + G+V+ FG+
Sbjct: 326 LGD---------ATDRIIPTLVTGFANEKVIDIDAKGCRSIALTNTGKVFAFGNET---- 372
Query: 271 LFQEGNHARRPSLISG 286
E + R P ++G
Sbjct: 373 ---EPHLNRIPRFVAG 385
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 162/382 (42%), Gaps = 50/382 (13%)
Query: 49 GRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGIS 106
G+LGL S + PV ++ +A G H+L L+ G V++ G + FGQLG
Sbjct: 1406 GQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEVWSWGGSPFGQLG-H 1464
Query: 107 ENIGYSLEP---LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
E I L P L + +V I+ GY S+A++ GE++ WG +G+LG A K
Sbjct: 1465 ETITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAKGEVFTWGNGESGELG---HAPK 1521
Query: 164 VIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
V+ P+ ++ S + Q A GF+ + ++ + GS +G ++ G +
Sbjct: 1522 VLTYAPSLIKDFSEVV--QIACGFKHMAGIVFKPRMKTIELTGSSNIGD-NSTTFSGSIA 1578
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ S + +A ++ +G V+++G+ ++ + AR PS
Sbjct: 1579 AGSVSGSTRSHTTGHHTTRTSA---FSASNQKRHGCVFVWGEDTCGQLGIRGLQAARSPS 1635
Query: 283 LI----------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
L+ G LY G +E+G LG+G + +P ++ +
Sbjct: 1636 LMQSLLATSIVHISANSDMSAFVTDSGSLYVSGGSEHGRLGLGHMAPAPTPVEIRS-LNT 1694
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
+ +V+CG H A++E K + + WG DG G G N D + P ++
Sbjct: 1695 VKIMKVACGTYHCLALTEEKRV-YAWG--------DG--KWGNAGVSNTNDVLEPQELSS 1743
Query: 381 GENVKALQVSCGFNHTGALLEY 402
+ V G H+ AL +Y
Sbjct: 1744 LAACSIIGVHAGGFHSAALSQY 1765
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 156/395 (39%), Gaps = 82/395 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG S++ + P + ++ K + + CG HTL + +G +Y+ G N GQ
Sbjct: 264 WGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQ 323
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + + P ++G E V+ I S A+T G+++ +G + L +
Sbjct: 324 LGLGDATDRII-PTLVTGFANEKVIDIDAKGCRSIALTNTGKVFAFGNETEPHLNRIPRF 382
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+P K + + + + A F A++ G++ W
Sbjct: 383 VAGLP---KSDLIIAV-ARTAHFDF----AISDTGQLFRWRP------------------ 416
Query: 222 RSTSEYTPRLIKELEGVK-VKIAAAGFLHSA--CIDENGRVYIFGDR------------- 265
S+ E + R+++ +K V G H A C E G R
Sbjct: 417 FSSEEESSRMLESFHAIKGVVRMFCGHNHMAVICSPEMGCTQAMISRNKSTSFSSDISRA 476
Query: 266 -----AVDKMLFQEGNHAR------------RPSLISGGELYTWGSNENGCLGIGSIDVL 308
+K+L G + PS G +YT+G G LG G ++
Sbjct: 477 SLEKFPSEKILPALGTNTEYLDEFATVQVRDSPSREGDGYIYTYGKGVFGRLGHG-VEYT 535
Query: 309 HSPERVQGP-----FSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 362
S E V+ P ++ V ++CG TAA+++ GK+ TW G S+ G
Sbjct: 536 RSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKVYTW------------GKSAQG 583
Query: 363 Q--LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
+ LG G + + P +V + Q+S G NH
Sbjct: 584 KLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNH 618
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 98/441 (22%), Positives = 161/441 (36%), Gaps = 107/441 (24%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG------- 96
G +G+LGLG R P + + F + + G ++ LT TG V+A G
Sbjct: 317 GANTHGQLGLGDATDRIIPTLVTGFANEKVIDIDAKGCRSIALTNTGKVFAFGNETEPHL 376
Query: 97 ----------------------------LNDFGQLGISENIGYSLEPLRISG---LKKEV 125
++D GQL E R+ K V
Sbjct: 377 NRIPRFVAGLPKSDLIIAVARTAHFDFAISDTGQLFRWRPFSSEEESSRMLESFHAIKGV 436
Query: 126 VQISTGYHHSSAITVDGEL----YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
V++ G++H A+ E+ M +N + A + P++ + L + T
Sbjct: 437 VRMFCGHNHM-AVICSPEMGCTQAMISRNKSTSFSSDISRASLEKFPSE-KILPALGTNT 494
Query: 182 ------AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT-PRLIKE 234
A + S + G G + ++G G GRLGHG E + RS P+ I+
Sbjct: 495 EYLDEFATVQVRDSPSREGDGYIYTYGKGVFGRLGHGVE-----YTRSEESVKHPKRIET 549
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM--------------LFQE------ 274
L + V A G +A + + G+VY +G A K+ L Q+
Sbjct: 550 LAKMSVVFIACGKDSTAALTDTGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVV 609
Query: 275 ------GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 328
NHA + + + + WGSN G LGI I E+ + ++C
Sbjct: 610 CQISLGRNHAACSTDMH--KFFVWGSNTFGQLGIPHISSYMPDPYEITSLREANIRSIAC 667
Query: 329 -GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN---------DVDYIHPTIV 378
GW + + G +++ G G GQLGHG+ + Y +
Sbjct: 668 GGWHTLISTNTGSVMSCGKGWH------------GQLGHGDYESLTALSKTLPYFKKIVE 715
Query: 379 NFGENVKALQVSCGFNHTGAL 399
FG++ ++VS G + A+
Sbjct: 716 GFGDSF-IVKVSAGKESSAAI 735
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 85/223 (38%), Gaps = 66/223 (29%)
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIAAAGFL 248
V + G + +WG G +GRLGHG T TP+ I K+ A G
Sbjct: 1173 VDLEGEYHIYTWGCGVNGRLGHGFH---------TGYSTPQEITSFPSNTKIVEVACGCE 1223
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLG-IGSIDV 307
HS R+ D G +Y WG+ + G LG + + D
Sbjct: 1224 HSLA------------RSFD------------------GGVYAWGAGDRGQLGSLENFDC 1253
Query: 308 LHSPERVQGPFSESPVDQ--------VSCG-WKHTAAISEGKILTWGWGGSHGTFSEDGH 358
+ ++ F+ PV ++CG W + SE ++L+WG G
Sbjct: 1254 V----KINYAFNPQPVLNLKRYFILSIACGRWHNMTLTSERQVLSWGAG----------- 1298
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GQLG +++ P +V + ++ CG H+ A+LE
Sbjct: 1299 -EFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAILE 1340
>gi|403263469|ref|XP_003924054.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Saimiri boliviensis boliviensis]
Length = 988
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 142/310 (45%), Gaps = 47/310 (15%)
Query: 44 GNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GR G RW P A + ++CG H+L + G V+A G GQ
Sbjct: 51 SRGQLGRRG----APRWDLPEPVQALKTLKFDLVSCGKEHSLAVCHKGRVFAWGAGSEGQ 106
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ E + P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 107 LGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEF 166
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 167 PSQ-PSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRN 219
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P I L+ + V + G H+A + ++G+V+ FGD + ++ + R P
Sbjct: 220 VQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEKRGP 279
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEG 339
L+ ER+ G V Q+ CG HT A + G
Sbjct: 280 QLV---------------------------ERIDG-----LVSQIDCGGDHTIAYVHTTG 307
Query: 340 KILTWGWGGS 349
+++++G G S
Sbjct: 308 QVVSFGRGPS 317
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 124/280 (44%), Gaps = 56/280 (20%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G H+ + + ++ G+NS GQLG ++ A +P V+ L + +
Sbjct: 24 ELLQAASGERHALLLLTNSLVHSCGENSRGQLG--RRGAPRWDLPEPVQALKTLKFDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TPR I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEI--------NFTPRKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G HS + ++ +V ++WG N +G LG+G
Sbjct: 134 SCGHYHSLALSKDSQV------------------------------FSWGKNSHGQLGLG 163
Query: 304 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
SP+RV+ P+ QV+ G H+ A+S ++GWG +S G
Sbjct: 164 KEFPSQPSPQRVRS-LEGIPLAQVAAGGAHSFALSLCGT-SFGWGS----------NSAG 211
Query: 363 QL---GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
QL G V P + +N+ + +SCG HT L
Sbjct: 212 QLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVL 251
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 110/230 (47%), Gaps = 14/230 (6%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G L E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIP-IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L L + +V P + L + + G E + ++ GKV ++G SG+LG+
Sbjct: 213 LALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSP 272
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G P+L++ ++G+ +I G A + G+V FG
Sbjct: 273 TPEKRG---------PQLVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFG 313
>gi|255567172|ref|XP_002524567.1| cell cycle regulatory protein, putative [Ricinus communis]
gi|223536120|gb|EEF37775.1| cell cycle regulatory protein, putative [Ricinus communis]
Length = 441
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 193/444 (43%), Gaps = 88/444 (19%)
Query: 24 LGICKRWISSTLQRRFAAL-WGNGDYGRLGL-----GSLESRWRPVVCSAFEKHSLKALA 77
L +R ISS R + +G+G +G LGL G + P + S + +
Sbjct: 15 LNATRRCISSFNHRDTIVMSFGDGSHGALGLPNSLTGLGTDAYEPTIVSGLPS-DIVGVT 73
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYHH- 134
G H+L +T TG ++A G N+ QLG I EP R+ GL K V I + Y
Sbjct: 74 AGHYHSLAVTSTGQLWAWGRNNEAQLGRCIPAPRDTWNEPKRVEGLNK--VHILSAYASG 131
Query: 135 --SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
S+AI DG L++WGK+ GQLGLGK + +P+K+E L+G + + G+ ++A+
Sbjct: 132 VVSAAIANDGSLWVWGKSKRGQLGLGKGITEAF-VPSKIEALAGTKIAKVSFGWGHALAL 190
Query: 193 TGGGKVLSWGAGGSGRLG------------------------HGQESSILGFLRSTSE-- 226
+ GK+ WG GRLG E +L + ++
Sbjct: 191 SEEGKLFGWGYSADGRLGKIMGALEVSALDSNANQQVPKLMLEASERLVLEGMEKENDMP 250
Query: 227 --YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY-----IFGD--RAVDKMLFQEGNH 277
+ P L++EL G KV A G HS + +G + I+G RA ++ +
Sbjct: 251 ILWDPCLVEELHGTKVVDIACGLDHSLVLCCDGTLLSSGSNIYGQLGRANHEIGLFPVDL 310
Query: 278 ARRPSLISGG--------------------ELYTWGSNENGCLG-IGSIDVLHSPERVQG 316
PS I+ G + +WG N++ LG +G + P ++G
Sbjct: 311 NIHPSSIAAGLGHSLAICRAASSDAEGDARNIVSWGWNQSSQLGRLGPEGI---PLEIEG 367
Query: 317 PFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
E PV VS G H+ A+ S+G++ WG G G+LG G+ D P
Sbjct: 368 LAGEIPV-SVSGGRVHSIALTSKGEVWVWGCG------------KNGRLGLGSSSDEAEP 414
Query: 376 TIVNFGENVKALQVSCGFNHTGAL 399
+++ E + LQ+ GF+H L
Sbjct: 415 ILLDSLEGYEVLQIVSGFDHNLVL 438
>gi|335296869|ref|XP_003357882.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sus scrofa]
Length = 531
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 140/301 (46%), Gaps = 49/301 (16%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
TP V++AA LHS C+++ + G +A +L
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ----IVCG-------------YAHTLALTDE 251
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTW 344
G LY WG+N G LG G+ + L SP + E V+ +C HT+A G + W
Sbjct: 252 GLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMW 310
Query: 345 G 345
G
Sbjct: 311 G 311
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 138/312 (44%), Gaps = 51/312 (16%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V A G HS + +G V+ +G ++ G+ A +P+
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV S V+Q+
Sbjct: 180 IKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG ++ GQLG GN + + P + +
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHIMVEKERVV 287
Query: 387 LQVSCGFNHTGA 398
+C HT A
Sbjct: 288 EIAACHSAHTSA 299
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312
>gi|359473366|ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
Length = 1047
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 171/370 (46%), Gaps = 69/370 (18%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQIST 130
+ ++ACGG H + +T+ G V++ G +LG + S L + G+ E+V +
Sbjct: 294 VHSIACGGKHAVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELV--AC 351
Query: 131 GYHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFE 187
G +HS A+T+ G+LY WG +++G LG G +A+ IP KV + G+ A G
Sbjct: 352 GEYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHWIP--KKVSGPMEGMHVSYVACGPW 409
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+ VT G++ ++G G G LGHG SS+ PR ++ L G + A G
Sbjct: 410 HTAVVTSAGQLFTFGDGTFGALGHGDHSSM---------SIPREVEALRGQRTMRVACGV 460
Query: 248 LHSACIDE---------------NGRVYIFGD-------------RAVDK---MLFQEG- 275
H+A + E +G+++ +GD R V + L E
Sbjct: 461 WHTAAVVELMIASSSFESSGSSSSGKLFTWGDGDKGRLGHGDKEPRLVPQSVTALINESF 520
Query: 276 -----NHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 330
H +L + G +YT GS G LG D P V+G + S V++V+CG
Sbjct: 521 CQVACGHNLSVALTTSGRVYTMGSAVYGQLGSPVADG-KIPTLVEGKIANSFVEEVACGS 579
Query: 331 KHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 389
H A + S+ ++ TWG G + GQLGHG++ PT+V+F ++ + V
Sbjct: 580 YHVAVLTSKTEVYTWGKG------------TNGQLGHGDNDHRNTPTLVDFLKDKQVKNV 627
Query: 390 SCGFNHTGAL 399
CG N T A+
Sbjct: 628 VCGLNFTAAI 637
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 119/271 (43%), Gaps = 58/271 (21%)
Query: 142 GELYMWGKN-SNGQLGLG------KKAAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVT 193
G+++MWG+ +G +G G + K+ + P +E + A G + +V VT
Sbjct: 249 GDVFMWGEGIGDGIMGAGVHRVGSSSSTKIDALLPKALESTVVLDVHSIACGGKHAVLVT 308
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG RLGHG E + P+LI L G+ +++ A G HS +
Sbjct: 309 KKGEVFSWGEECGSRLGHGVEVDV---------SHPKLIDALCGMNIELVACGEYHSCAV 359
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+G +Y +GD G++ +G LG GS P++
Sbjct: 360 TLSGDLYTWGD----------------------------GTHNSGLLGHGSEASHWIPKK 391
Query: 314 VQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V GP V V+CG HTA + S G++ T+G GTF G LGHG+
Sbjct: 392 VSGPMEGMHVSYVACGPWHTAVVTSAGQLFTFG----DGTF--------GALGHGDHSSM 439
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
P V + ++V+CG HT A++E +
Sbjct: 440 SIPREVEALRGQRTMRVACGVWHTAAVVELM 470
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 132/314 (42%), Gaps = 62/314 (19%)
Query: 43 WGNGDY--GRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+G + G LG GS S W P V E + +ACG HT +T G ++ G
Sbjct: 368 WGDGTHNSGLLGHGSEASHWIPKKVSGPMEGMHVSYVACGPWHTAVVTSAGQLFTFGDGT 427
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAIT---------------VDGE 143
FG LG ++ S+ P + L+ + ++++ G H++A+ G+
Sbjct: 428 FGALGHGDHSSMSI-PREVEALRGQRTMRVACGVWHTAAVVELMIASSSFESSGSSSSGK 486
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
L+ WG G+LG G K ++ +P V L Q A G SVA+T G+V + G+
Sbjct: 487 LFTWGDGDKGRLGHGDKEPRL--VPQSVTALINESFCQVACGHNLSVALTTSGRVYTMGS 544
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LG + P L+ EG KIA + AC G ++
Sbjct: 545 AVYGQLGSPVADGKI----------PTLV---EG---KIANSFVEEVAC----GSYHV-- 582
Query: 264 DRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
AV L S E+YTWG NG LG G D ++P V + V
Sbjct: 583 --AV---------------LTSKTEVYTWGKGTNGQLGHGDNDHRNTPTLVDF-LKDKQV 624
Query: 324 DQVSCGWKHTAAIS 337
V CG TAAIS
Sbjct: 625 KNVVCGLNFTAAIS 638
>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
gallopavo]
Length = 567
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 138/303 (45%), Gaps = 49/303 (16%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG G ++S P + + L+ G G H + TE G VY G N + QLG +
Sbjct: 93 GCLGTGDVQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLG-NG 151
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P ++S + K+V++++ G HHS +T DGE+Y WG N++GQ+G G A +
Sbjct: 152 TTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ-- 209
Query: 166 PIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 210 PIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGS---------SG 260
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
++ TP I L+G++V+ A G H+ + + G++
Sbjct: 261 NQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQI------------------------- 295
Query: 285 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKIL 342
Y WG+N G LG G+ P V + ++ +C HT+A G++
Sbjct: 296 -----YAWGANSYGQLGTGNKSNQSYPTTVTVD-KDRVIEIAACHSAHTSAAKTQSGQVY 349
Query: 343 TWG 345
WG
Sbjct: 350 MWG 352
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P V + + +ACG H++ LT G VY G N+ G
Sbjct: 140 WGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSG 199
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++ K VV I+ G S A+ +GE+Y+WG N NGQLGLG
Sbjct: 200 QVGSGSTANQPI-PRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGS 258
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P ++ L GI ++ A G ++ +T G++ +WGA G+LG G +S
Sbjct: 259 SGNQ--PTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKS---- 312
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ P + + ++IAA H SA ++G+VY++G
Sbjct: 313 -----NQSYPTTVTVDKDRVIEIAACHSAHTSAAKTQSGQVYMWG 352
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 145/348 (41%), Gaps = 62/348 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L++TE V+ G+N G LG + + ++E
Sbjct: 47 KWPIFSLCSQEELKLIRQACVFGSAGNEVLYVTENDEVFVLGMNCSGCLGTGD-VQSTIE 105
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE+Y WG N+ QLG G ++P
Sbjct: 106 PKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTN 165
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
L + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 166 -LVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGS---------TANQPIPRRV 215
Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYT 291
KV + A G + S + ENG VY+
Sbjct: 216 TSCLQNKVVVNIACGQMCSMAVVENGEVYV------------------------------ 245
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSH 350
WG N NG LG+GS +P R+ V +V+CG HT ++ EG+I WG
Sbjct: 246 WGYNGNGQLGLGSSGNQPTPCRI-AALQGIRVQRVACGCAHTLVLTDEGQIYAWG----- 299
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 300 -------ANSYGQLGTGNKSNQSYPTTVTVDKDRVIEIAACHSAHTSA 340
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 245 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYG 304
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K V++I+ + H S+A T G++YMWG+ GQ
Sbjct: 305 QLGTGNKSNQSY-PTTVTVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ----- 357
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 358 --SVVLPHLTHFACTDDVF 374
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 109/268 (40%), Gaps = 58/268 (21%)
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTG 194
+T + E+++ G N +G LG G + + P +++ L G K A L + V T
Sbjct: 78 VTENDEVFVLGMNCSGCLGTGDVQSTIEP--KRLDSLCG--KKIACLSYGSGPHVVLATE 133
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G+V +WG +LG+G + L + ++ + + E+ A G HS
Sbjct: 134 EGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEV--------ACGSHHSM--- 182
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
L S GE+YTWG N +G +G GS P RV
Sbjct: 183 ---------------------------VLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRV 215
Query: 315 QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
V ++CG + A+ E G++ WG+ G+ GQLG G+ +
Sbjct: 216 TSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGN------------GQLGLGSSGNQP 263
Query: 374 HPTIVNFGENVKALQVSCGFNHTGALLE 401
P + + ++ +V+CG HT L +
Sbjct: 264 TPCRIAALQGIRVQRVACGCAHTLVLTD 291
>gi|354500509|ref|XP_003512342.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Cricetulus
griseus]
gi|344258048|gb|EGW14152.1| RCC1 and BTB domain-containing protein 1 [Cricetulus griseus]
Length = 531
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 133/300 (44%), Gaps = 47/300 (15%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P P
Sbjct: 114 QGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKVTSCLHTKRVVSIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
TP + L+ V V G+ H+ +L G
Sbjct: 223 TPVRVAALQSVCVNQIVCGYAHTL------------------------------ALTDEG 252
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 345
LY WG+N G LG GS + L SP + E V+ +C HT+A G + WG
Sbjct: 253 LLYAWGANTYGQLGTGSKNNLLSPTPIMVE-KERVVEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 117/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTSCLHTKRVVSIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALQSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
TP ++ E E V V+IAA H SA + G VY++G
Sbjct: 276 -------PTPIMV-EKERV-VEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 136/312 (43%), Gaps = 51/312 (16%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P + ++K V + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQETASIRKACV-FGASANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V A G HS + +G V+ +G ++ G+ A +P+
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQV--GSGSTANQPTPRKVTSCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV V+Q+
Sbjct: 180 TKRVVSIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRV-AALQSVCVNQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG ++ GQLG G+ + + PT + +
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGSKNNLLSPTPIMVEKERVV 287
Query: 387 LQVSCGFNHTGA 398
+C HT A
Sbjct: 288 EIAACHSTHTSA 299
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 75/139 (53%), Gaps = 13/139 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALQSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGI-SENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S+N S P+ + K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LGTGSKNNLLSPTPIMVE--KERVVEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 317 --SVVLPHLTHFSCTDDVF 333
>gi|114321834|ref|YP_743517.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
gi|114228228|gb|ABI58027.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
Length = 821
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 153/351 (43%), Gaps = 47/351 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D+G LGLG + P+ + A + G T + G ++ G N GQ
Sbjct: 447 WGRNDFGELGLGVMVYITSPL--QTVTEADWAAASAGQYQTQAVKADGSLWGWGRNHSGQ 504
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ + P+++ G + +S G H+ A+ DG L+ WG+N NGQLGLG
Sbjct: 505 LGLGDTDDRHA-PVQVGG-DSDWTSLSVGREHTLAVKADGTLWGWGQNYNGQLGLGDTDD 562
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P +V S T A G+ ++AV G + +W GR HGQ LG
Sbjct: 563 R--KTPERVGSDSDWATVSAGTGY--TLAVKDDGTLWAW-----GRNSHGQ----LGLGD 609
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ + P ++ +AG H+ + +G ++ +G + ++ + ++ P
Sbjct: 610 TNNRDAP--VQVASDNDWAAVSAGSRHTLAVKNDGTLWAWGRNSDGQLGLGDTDNRDVPE 667
Query: 283 LI--------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
+ + G L+ WG N +G LG+G D H+PE+V G +S
Sbjct: 668 QVGSDTDWAAVSTGSGHTLAVKTDGTLWAWGRNSDGQLGLGDTDERHAPEQVGG---DSD 724
Query: 323 VDQVSCGWKHTAAISEGKILTWGWG----GSHGTFSEDGHSSGGQLGHGND 369
V+ GW+HT AI L WGWG G G DG + Q+G +D
Sbjct: 725 WAAVTAGWQHTLAIKNDGTL-WGWGLNLYGQLGLGDTDGRHAPMQVGSDSD 774
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 147/328 (44%), Gaps = 51/328 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGLG E R P + A++ GGA+TL + + G ++A G N FGQ
Sbjct: 147 WGQNNVGQLGLGDTEKRDTPAQVGS--DTDWAAVSAGGAYTLAVKDDGTLWAWGENYFGQ 204
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ + P ++ G + V +S G HH+ A+ DG L+ WG+N GQLGLG
Sbjct: 205 LGLGDTDDRH-APEQV-GSDSDWVAVSAGRHHTLALKADGTLWAWGRNYFGQLGLGGTTN 262
Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P G + A + G S+AV G + SWG G+LG G
Sbjct: 263 RNAPEQV------GSHSDWAGVIGGDRHSLAVREDGTLWSWGQNNVGQLGLG-------- 308
Query: 221 LRSTSEYTPRLIKELEGVKVKIA--AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ R E G A +AG LH+ + +G ++ +G ++ + ++
Sbjct: 309 -----DTVERRRPEQVGNDSDWATVSAGLLHTLAVKNDGTLWAWGGNGFGQLGLGDTDNR 363
Query: 279 RRP--------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
P ++ + G L++WG N+ G LG+G D H+PE+V G
Sbjct: 364 DAPVQVGSDNDWAALNAGQRYSLAVKNDGSLWSWGWNDFGELGLGDTDDRHAPEQVGGGM 423
Query: 319 SESPVDQVSCGWKHTAAI-SEGKILTWG 345
+ V+ G HT + ++G + WG
Sbjct: 424 EWAA---VTAGMYHTLGVKADGTLRAWG 448
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 165/369 (44%), Gaps = 39/369 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGLG ++R PV + + AL G ++L + G +++ G NDFG+
Sbjct: 347 WGGNGFGQLGLGDTDNRDAPVQVGS--DNDWAALNAGQRYSLAVKNDGSLWSWGWNDFGE 404
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ + P ++ G E ++ G +H+ + DG L WG+N G+LGLG
Sbjct: 405 LGLGDTDDRHA-PEQVGG-GMEWAAVTAGMYHTLGVKADGTLRAWGRNDFGELGLGVMVY 462
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P+ T E A+ G Q+ AV G + WG SG+LG G ++
Sbjct: 463 ITSPLQTVTEA----DWAAASAGQYQTQAVKADGSLWGWGRNHSGQLGLGDTDDRHAPVQ 518
Query: 223 --STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S++T + + VK A G L + NG++ + GD K + G+ +
Sbjct: 519 VGGDSDWTSLSVGREHTLAVK--ADGTLWGWGQNYNGQLGL-GDTDDRKTPERVGSDSDW 575
Query: 281 PSLISG----------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 330
++ +G G L+ WG N +G LG+G + +P +V S++ VS G
Sbjct: 576 ATVSAGTGYTLAVKDDGTLWAWGRNSHGQLGLGDTNNRDAPVQVA---SDNDWAAVSAGS 632
Query: 331 KHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 390
+HT A+ L W W G +S GQLG G+ + P V G + VS
Sbjct: 633 RHTLAVKNDGTL-WAW----------GRNSDGQLGLGDTDNRDVPEQV--GSDTDWAAVS 679
Query: 391 CGFNHTGAL 399
G HT A+
Sbjct: 680 TGSGHTLAV 688
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 153/358 (42%), Gaps = 66/358 (18%)
Query: 63 VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK 122
V C+AF LA GG HTL + G ++A G N+ GQLG+ + P ++ G
Sbjct: 120 VECTAF-----PVLAAGGVHTLAMKADGTLWAWGQNNVGQLGLGDTEKRDT-PAQV-GSD 172
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
+ +S G ++ A+ DG L+ WG+N GQLGLG + P +V S A
Sbjct: 173 TDWAAVSAGGAYTLAVKDDGTLWAWGENYFGQLGLGDTDDR--HAPEQVGSDSDWVAVSA 230
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI---KELEGVK 239
G ++A+ G + +WG G+LG G +T+ P + + GV
Sbjct: 231 --GRHHTLALKADGTLWAWGRNYFGQLGLGG---------TTNRNAPEQVGSHSDWAGV- 278
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI--------------- 284
G HS + E+G ++ +G V ++ + RRP +
Sbjct: 279 ----IGGDRHSLAVREDGTLWSWGQNNVGQLGLGDTVERRRPEQVGNDSDWATVSAGLLH 334
Query: 285 -----SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SE 338
+ G L+ WG N G LG+G D +P +V S++ ++ G +++ A+ ++
Sbjct: 335 TLAVKNDGTLWAWGGNGFGQLGLGDTDNRDAPVQVG---SDNDWAALNAGQRYSLAVKND 391
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
G + +WGW + G+LG G+ D P V G A V+ G HT
Sbjct: 392 GSLWSWGW------------NDFGELGLGDTDDRHAPEQVGGGMEWAA--VTAGMYHT 435
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 80/169 (47%), Gaps = 8/169 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG ++R V A++ G HTL + G ++A G N GQ
Sbjct: 647 WGRNSDGQLGLGDTDNR--DVPEQVGSDTDWAAVSTGSGHTLAVKTDGTLWAWGRNSDGQ 704
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ + P ++ G + ++ G+ H+ AI DG L+ WG N GQLGLG
Sbjct: 705 LGLGD-TDERHAPEQVGG-DSDWAAVTAGWQHTLAIKNDGTLWGWGLNLYGQLGLGDTDG 762
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+ P+ +V S T A G ++AV G + +WG G+LG
Sbjct: 763 RHAPM--QVGSDSDWAT--VAAGRYHTLAVKDDGTLRAWGRNRFGQLGQ 807
>gi|444911573|ref|ZP_21231747.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444717927|gb|ELW58746.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 708
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 145/318 (45%), Gaps = 55/318 (17%)
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
H+L ++ G +A G N G+LG S P+R+ GLK EVV ++ G HS A+ D
Sbjct: 372 HSLAVSADGSAWAWGHNSHGELGDGSTR-NSPAPVRVDGLK-EVVAVAAGSSHSLALLAD 429
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G + WG N+ GQLG G +A+ +P +V L G+ A G S+A+ G V +W
Sbjct: 430 GTVLAWGDNTFGQLGDGTRASH--SVPAQVRGLRGVVA--VAAGSSHSLALLADGTVWTW 485
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G +G+LG G +T Y P +K LEGV V +AA G HS + +G +
Sbjct: 486 GYNLNGQLGDGT---------TTYRYEPVAVKGLEGV-VAVAAGGN-HSLAVRSDGTAWA 534
Query: 262 FGDRAVDKMLFQEGNHARRPSLI--------------------SGGELYTWGSNENGCLG 301
+G+ K +G RP+ + S G + WG+N +G LG
Sbjct: 535 WGENV--KGQLGDGTLTSRPAPVEVKAAAKAVAAAQGLSLAVGSDGFPWAWGNNSSGQLG 592
Query: 302 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 360
GS P RVQG V V+ G H+ A+S EG + W G ++
Sbjct: 593 DGSTTSRPMPMRVQG---AGEVVAVAAGNGHSLALSPEGGVWAW------------GQNA 637
Query: 361 GGQLGHGNDVDYIHPTIV 378
GQLG G + PT V
Sbjct: 638 RGQLGEGTLDRRLAPTRV 655
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 112/361 (31%), Positives = 163/361 (45%), Gaps = 70/361 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN G+LG GS ++R PV A AH+L + G ++A G N +GQ
Sbjct: 134 WGNNSSGQLGDGSFDNRAEPVRVRGSSGVVAVAAGG--AHSLAVRSDGILWAWGDNLYGQ 191
Query: 103 LGISENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG S ++ LR++G V +S G +HS A++ DG ++ WG NS+GQLG+ +
Sbjct: 192 LGNRGEFNSSEPVQVLRVTG----GVTVSAGANHSLAVSADGTVWAWGDNSHGQLGI-AR 246
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ IP +V + G A G S+AV G V +WG+ G G+LG+G F
Sbjct: 247 TTPLLSIPGRVPEVRGSVAMAA--GDNHSLAVRDDGTVWAWGSNGHGQLGNG-------F 297
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ SE P + LEGV AAG HS + ++G V+
Sbjct: 298 MVDNSE--PGRVPGLEGVGA--VAAGSNHSLAVRDDGTVW-------------------- 333
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EG 339
WGSN G G G+ L +P RV S V V+ H+ A+S +G
Sbjct: 334 ----------AWGSNVEGQRGDGTTGQLSAPTRVP---GVSGVVGVAANVFHSLAVSADG 380
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
W GH+S G+LG G+ + P V+ + V A V+ G +H+ AL
Sbjct: 381 SAWAW------------GHNSHGELGDGSTRNSPAPVRVDGLKEVVA--VAAGSSHSLAL 426
Query: 400 L 400
L
Sbjct: 427 L 427
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 159/353 (45%), Gaps = 66/353 (18%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+A GG+H+L + + G V+A G N GQLG P+R+ GL VV ++ G HS
Sbjct: 15 IATGGSHSLSVHQDGTVWAVGGNSVGQLG-DGTTSLRRVPVRVLGLSG-VVTVAAGGGHS 72
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ DG ++ WG NS+GQLG G + P+ +V LSG+ A G S+AV+
Sbjct: 73 LAVHSDGTVWAWGNNSSGQLGDGSFDNRAEPV--RVRGLSGVVA--VAAGGYHSLAVSAD 128
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK------IAAAGFLH 249
G V +WG SG+LG G E V+V+ AAG H
Sbjct: 129 GTVWAWGNNSSGQLGDGS-----------------FDNRAEPVRVRGSSGVVAVAAGGAH 171
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRP--------------------SLISGGEL 289
S + +G ++ +GD ++ + ++ P ++ + G +
Sbjct: 172 SLAVRSDGILWAWGDNLYGQLGNRGEFNSSEPVQVLRVTGGVTVSAGANHSLAVSADGTV 231
Query: 290 YTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGG 348
+ WG N +G LGI + +L P RV P V ++ G H+ A+ + + W WG
Sbjct: 232 WAWGDNSHGQLGIARTTPLLSIPGRV--PEVRGSV-AMAAGDNHSLAVRDDGTV-WAWG- 286
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+GH GQLG+G VD P V E V A V+ G NH+ A+ +
Sbjct: 287 ------SNGH---GQLGNGFMVDNSEPGRVPGLEGVGA--VAAGSNHSLAVRD 328
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 130/320 (40%), Gaps = 73/320 (22%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G LG GS + PV ++ + A+A G +H+L L G V A G N FGQ
Sbjct: 385 WGHNSHGELGDGSTRNSPAPVRVDGLKE--VVAVAAGSSHSLALLADGTVLAWGDNTFGQ 442
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG +S+ P ++ GL+ VV ++ G HS A+ DG ++ WG N NGQLG G
Sbjct: 443 LGDGTRASHSV-PAQVRGLRG-VVAVAAGSSHSLALLADGTVWTWGYNLNGQLGDGTTTY 500
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG---------- 212
+ P+ V+ L G+ A G S+AV G +WG G+LG G
Sbjct: 501 RYEPV--AVKGLEGVVA--VAAGGNHSLAVRSDGTAWAWGENVKGQLGDGTLTSRPAPVE 556
Query: 213 -----------------------------QESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
S LG +TS P ++ +V
Sbjct: 557 VKAAAKAVAAAQGLSLAVGSDGFPWAWGNNSSGQLGDGSTTSRPMPMRVQGAG--EVVAV 614
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISG--------------- 286
AAG HS + G V+ +G A + EG RR P+ + G
Sbjct: 615 AAGNGHSLALSPEGGVWAWGQNA--RGQLGEGTLDRRLAPTRVQGLSGVVAVAAGGAFSL 672
Query: 287 -----GELYTWGSNENGCLG 301
G +++WG N G LG
Sbjct: 673 AVRDDGSVWSWGDNAFGQLG 692
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 86/169 (50%), Gaps = 10/169 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+L SR PV A K A +L + G +A G N GQ
Sbjct: 535 WGENVKGQLGDGTLTSRPAPVEVKAAAKAVAAAQGL----SLAVGSDGFPWAWGNNSSGQ 590
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+R+ G EVV ++ G HS A++ +G ++ WG+N+ GQLG G
Sbjct: 591 LGDGSTTSRPM-PMRVQG-AGEVVAVAAGNGHSLALSPEGGVWAWGQNARGQLGEGTLDR 648
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
++ P T+V+ LSG+ A F S+AV G V SWG G+LG+
Sbjct: 649 RLAP--TRVQGLSGVVAVAAGGAF--SLAVRDDGSVWSWGDNAFGQLGN 693
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 116/255 (45%), Gaps = 40/255 (15%)
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
G + +I+TG HS ++ DG ++ G NS GQLG G + + +P+ +V LSG+ T
Sbjct: 7 GAARAPARIATGGSHSLSVHQDGTVWAVGGNSVGQLGDGTTSLRRVPV--RVLGLSGVVT 64
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
A G S+AV G V +WG SG+LG G + P ++ L GV
Sbjct: 65 --VAAGGGHSLAVHSDGTVWAWGNNSSGQLGDGSFD---------NRAEPVRVRGLSGV- 112
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP------------------ 281
V +AA G+ HS + +G V+ +G+ + ++ ++ P
Sbjct: 113 VAVAAGGY-HSLAVSADGTVWAWGNNSSGQLGDGSFDNRAEPVRVRGSSGVVAVAAGGAH 171
Query: 282 --SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
++ S G L+ WG N G L G+ +S E VQ V VS G H+ A+S +
Sbjct: 172 SLAVRSDGILWAWGDNLYGQL--GNRGEFNSSEPVQVLRVTGGV-TVSAGANHSLAVSAD 228
Query: 339 GKILTWGWGGSHGTF 353
G + WG SHG
Sbjct: 229 GTVWAWG-DNSHGQL 242
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
Query: 39 FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
F WGN G+LG GS SR P+ + A+A G H+L L+ G V+A G N
Sbjct: 579 FPWAWGNNSSGQLGDGSTTSR--PMPMRVQGAGEVVAVAAGNGHSLALSPEGGVWAWGQN 636
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQLG + L P R+ GL V + S A+ DG ++ WG N+ GQLG
Sbjct: 637 ARGQLG-EGTLDRRLAPTRVQGLSGVVAVAAG-GAFSLAVRDDGSVWSWGDNAFGQLG 692
>gi|426236339|ref|XP_004012127.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Ovis aries]
Length = 531
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 140/301 (46%), Gaps = 49/301 (16%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLDALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
L P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
TP V++AA LHS C+++ + G +A +L
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ----IVCG-------------YAHTLALTDE 251
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTW 344
G LY WG+N G LG G+ + L SP + E ++ +C HT+A G + W
Sbjct: 252 GLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVIEIAACHSAHTSAAKTQGGHVYMW 310
Query: 345 G 345
G
Sbjct: 311 G 311
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V ++IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-IEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 141/313 (45%), Gaps = 53/313 (16%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T E++++G N + LG G + + +P K++
Sbjct: 13 LSPQEIASIRKACV-FGTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTL--VPKKLD 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + L ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V A G HS + +G V+ +G ++ G+ A +P+
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV S V+Q+
Sbjct: 180 IKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG ++ GQLG GN + + P + E +
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHI-MVEKERV 286
Query: 387 LQV-SCGFNHTGA 398
+++ +C HT A
Sbjct: 287 IEIAACHSAHTSA 299
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
LG + N L P I K+ V++I+ + H S+A T G +YMWG+
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQ 312
>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Canis lupus familiaris]
Length = 529
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 115/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++G K VV I+ G S A+ GE+Y+WG N NGQLGLG
Sbjct: 183 QVGSGSTANQPI-PRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS 241
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P ++ L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 242 SGNQ--PTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 293
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y ++ E + + V+IAA H SA + G VY++G
Sbjct: 294 --KSNQSYPAPVVVEKDRI-VEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 113/219 (51%), Gaps = 16/219 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P A + L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDALSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V +++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++ TP I L+G++++ A G+ H+ + + G+VY +G
Sbjct: 244 NQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWG 282
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 146/347 (42%), Gaps = 60/347 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 30 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 88
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 89 PRRLDALSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 149 -LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW 292
+ C+ V I A +M ++++ GE+Y W
Sbjct: 199 -----------------TGCLQNKVVVNI----ACGQMCSM--------AVVNTGEVYVW 229
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 351
G N NG LG+GS +P R+ + +V+CG+ HT ++ EG++ WG
Sbjct: 230 GYNGNGQLGLGSSGNQPTPCRIAA-LQGIRIQRVACGYAHTLVLTDEGQVYAWG------ 282
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +P V ++ +C HT A
Sbjct: 283 ------ANSYGQLGTGNKSNQSYPAPVVVEKDRIVEIAACHSAHTSA 323
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +V+I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PAPVVVEKDRIVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 341 --SVVLPHLTHFSCTDDVF 357
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 111/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ LSG K A L + V T
Sbjct: 62 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDALSG--KKIACLSYGSGPHIVLATTE 117
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEV--------ACGSYHSLV--- 166
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 167 ---------------------------LTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199
Query: 316 GPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG + A ++ G++ WG+ G+ GQLG G+ +
Sbjct: 200 GCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGN------------GQLGLGSSGNQPT 247
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P + + ++ +V+CG+ HT L +
Sbjct: 248 PCRIAALQGIRIQRVACGYAHTLVLTD 274
>gi|90657578|gb|ABD96878.1| hypothetical protein [Cleome spinosa]
Length = 393
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 151/365 (41%), Gaps = 65/365 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LGLG+ + + V A E ++++++ G ++L + + G ++ G N G
Sbjct: 10 WGSGEDGQLGLGTNDEKEWVCVVEALEPYAVRSVVSGSRNSLAICDDGTLFTWGWNQRGT 69
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
LG P ++ L ++VQ + G H A+ G Y WG N GQ G
Sbjct: 70 LGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPGK 129
Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
+ + + I IP + C + +Q A G SV +T G V SWG +
Sbjct: 130 DEMERPLRRDIVIPKR--CAPKLVVRQVAAGGTHSVVLTREGHVWSWG-----------Q 176
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
G ++ S P ++ LE V++ A G H+ ++EN
Sbjct: 177 PWPPGDIKQIS--IPVRVQGLE--NVRLIAVGAFHNLALEEN------------------ 214
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
G L+ WG+NE G LG G P VQG S + VD + GW TA
Sbjct: 215 ------------GTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLDSLTLVDIAAGGWHSTA 262
Query: 335 AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
+G++ WG G HG G + + P VN +QVSCG
Sbjct: 263 LTDKGEVYGWG-RGEHGRLG---------FGDNDKSSKMLPQKVNLLAGEDIIQVSCGGT 312
Query: 395 HTGAL 399
H+ AL
Sbjct: 313 HSVAL 317
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 137/318 (43%), Gaps = 57/318 (17%)
Query: 40 AALWGNGDYGRLG----LGSLESRWR-----PVVCSAFEKHSLKALACGGAHTLFLTETG 90
A WG +YG+ G +E R P C+ K ++ +A GG H++ LT G
Sbjct: 112 AYAWGGNEYGQCGEEPGKDEMERPLRRDIVIPKRCAP--KLVVRQVAAGGTHSVVLTREG 169
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
V++ +GQ +I P+R+ GL+ V I+ G H+ A+ +G L+ WG N
Sbjct: 170 HVWS-----WGQPWPPGDIKQISIPVRVQGLEN-VRLIAVGAFHNLALEENGTLWAWGNN 223
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
GQLG G + PIP V+ L + A G S A+T G+V WG G GRLG
Sbjct: 224 EYGQLGTGDTQPRSQPIP--VQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLG 281
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G +S+ P+ + L G + + G HS + +GR++ FG
Sbjct: 282 FGDNDK-------SSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFG------- 327
Query: 271 LFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ----- 325
G+H R + G T G +DV +G F+++ D
Sbjct: 328 ---RGDHGR----LGCGRKVTTGQ---------PLDVPVKIPPPEGQFNDAAEDDDGKWV 371
Query: 326 ---VSCGWKHTAAISEGK 340
V+CG +HT AI E K
Sbjct: 372 AKVVACGGRHTLAIVEWK 389
>gi|363728661|ref|XP_416780.3| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC418578
[Gallus gallus]
Length = 1212
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 157/359 (43%), Gaps = 61/359 (16%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ D+G+LGLGS + +P A + K CG HTL TE G VYA G N G
Sbjct: 62 MFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGGNSEG 121
Query: 102 QLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG+ E + L + + ++ Q++ G + S+A+T DG+L++WG NS GQ+GL
Sbjct: 122 QLGLGDTEERTTFHL--ISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLA 179
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
K +P V G + G+ S +TG G++ ++G +G+LG E
Sbjct: 180 DKTCVSVPCQVDV----GKPVSSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQ--- 232
Query: 219 GFLRSTSEYTPRL-IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
L+++ P L I E KV A G H+ + E G
Sbjct: 233 --LKNSRVPQPVLGIME----KVNKVACGGEHTVVLTETG-------------------- 266
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
+YT+G + G LG G++ S + + V+CG HTA I+
Sbjct: 267 -----------VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIA 315
Query: 338 E-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
E G + T+G G HG LG N + P + + + L V+CG H
Sbjct: 316 ENGLMFTFG-DGRHGKLG---------LGEENFANQFDPALCSNFLSFTVLLVACGGCH 364
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 149/325 (45%), Gaps = 52/325 (16%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + + V IS G H++ +T +G+LYM+G N GQLGLG
Sbjct: 21 FGKSNFAENI-----PSKFWFKNDKPVHISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGS 75
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + PT V+ L TK A G ++ T G V + G G+LG G
Sbjct: 76 K--NTVRKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTT 133
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F S +T + K+K AAG SA + E+G+++++GD + ++ +
Sbjct: 134 F-HLISFFTNQH-------KIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTCVS 185
Query: 280 RP-------------------SLISG-GELYTWGSNENGCLGIGSIDVLHS--PERVQGP 317
P + I+G GELYT+G ENG LG+ + +S P+ V G
Sbjct: 186 VPCQVDVGKPVSSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGI 245
Query: 318 FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PT 376
+ V++V+CG +HT ++E + T+G G GQLGHG + P
Sbjct: 246 MEK--VNKVACGGEHTVVLTETGVYTFGLG------------QYGQLGHGTLLFKTSVPK 291
Query: 377 IVNFGENVKALQVSCGFNHTGALLE 401
V + K V+CG +HT + E
Sbjct: 292 SVKHLRSHKIHNVTCGESHTAVIAE 316
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F ++ +ACGG H L
Sbjct: 323 FGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACGGCHMLVF 368
>gi|355749434|gb|EHH53833.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca fascicularis]
Length = 1020
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 143/309 (46%), Gaps = 42/309 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P I L+ + V + G H+A + ++G+V+ FGD + ++ + R P
Sbjct: 221 PVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQ 280
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
L+ ER+ G V Q+ CG HT A + G+
Sbjct: 281 LV---------------------------ERIDG-----LVSQIDCGSYHTLAYVHTTGQ 308
Query: 341 ILTWGWGGS 349
++++G G S
Sbjct: 309 VISFGHGPS 317
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 125/282 (44%), Gaps = 56/282 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRGELPEPIQALETLNVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G HS + ++ +V ++WG N +G LG+G
Sbjct: 134 SCGHYHSLALSKDSQV------------------------------FSWGKNSHGQLGLG 163
Query: 304 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
+ SP+RV+ P+ QV+ G H+ A+S ++GWG +S G
Sbjct: 164 KEVPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLCGT-SFGWGS----------NSAG 211
Query: 363 QL---GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QL G V P + +N+ + +SCG HT L++
Sbjct: 212 QLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQ 253
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 111/233 (47%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P + L + + G E + + GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ +I + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 86/168 (51%), Gaps = 6/168 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG + S+ P + E L +A GGAH+ L+ G + G N G
Sbjct: 152 WGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAG 211
Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N+ S +PL I LK V+ IS G H++ + DG+++ +G NS+GQLG
Sbjct: 212 QLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYS 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
K P VE + G+ ++ + V G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFGHGPS 317
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 82/202 (40%), Gaps = 38/202 (18%)
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ E R + G ++ AA+G HS + N RV GD + ++ + P
Sbjct: 8 DSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPE 67
Query: 283 LISG----------------------GELYTWGSNENGCLGIGSI-DVLHSPERVQGPFS 319
I G ++ WG+ G LGIG ++ +P+++ +
Sbjct: 68 PIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT-LN 126
Query: 320 ESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTI 377
+ QVSCG H+ A+S + ++ +W G +S GQLG G +V P
Sbjct: 127 GIKIIQVSCGHYHSLALSKDSQVFSW------------GKNSHGQLGLGKEVPSQASPQR 174
Query: 378 VNFGENVKALQVSCGFNHTGAL 399
V E + QV+ G H+ AL
Sbjct: 175 VRSLEGIPLAQVAAGGAHSFAL 196
>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
scrofa]
Length = 4060
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 138/306 (45%), Gaps = 47/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 3290 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 3349
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 3350 LGHSDSED-QLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 3407
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 3408 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3464
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 3465 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGS--------------------- 3496
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 3497 ----------YTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 3545
Query: 340 KILTWG 345
K + G
Sbjct: 3546 KPASAG 3551
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 2296 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2355
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 2356 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2413
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 2414 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2470
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH C+
Sbjct: 2471 -------RKPQVVEGLRGKKIVHVAVGALH--CL-------------------------- 2495
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
++ G++Y WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 2496 --AVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 2548
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 165/386 (42%), Gaps = 58/386 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3184 WGHNHRGQLGGIEGAKVKVPTPCEALA--ALRPVQLIGGEQTLFAVTADGKLYATGYGAG 3241
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3242 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3299
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 3300 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 3354
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L+ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 3355 ------SEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3408
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 3409 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3468
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
+VQG V ++ G H +E TW G + GQLG G
Sbjct: 3469 QVQG-LQGKKVIAIATGSLHCVCCTEDGSYTW------------GDNDEGQLGDGTTNAI 3515
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 3516 QRPRLVAALQGKKVNRVACGSAHTLA 3541
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2224 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 2283
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 2284 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 2341
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 2342 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2392
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 2393 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2452
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 2453 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG---- 2507
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 2508 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2548
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 114/258 (44%), Gaps = 52/258 (20%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2178 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2235
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 2236 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 2280
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 2281 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 2319
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 2320 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 2366
Query: 375 PTIVNFGENVKALQVSCG 392
P +V + +QV+CG
Sbjct: 2367 PKMVKVLLGHRVIQVACG 2384
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 109/252 (43%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3179 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 3236
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 3237 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 3279
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 3280 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 3319
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V+
Sbjct: 3320 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVDA 3366
Query: 381 GENVKALQVSCG 392
+ + + V+CG
Sbjct: 3367 LQGHRVVDVACG 3378
>gi|115461450|ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group]
gi|38345822|emb|CAD41927.2| OSJNBa0070M12.5 [Oryza sativa Japonica Group]
gi|113565896|dbj|BAF16239.1| Os04g0686200 [Oryza sativa Japonica Group]
gi|222629813|gb|EEE61945.1| hypothetical protein OsJ_16701 [Oryza sativa Japonica Group]
Length = 1057
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 166/374 (44%), Gaps = 69/374 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ S ++P + + +++ +ACG HT +T TG +Y G ++
Sbjct: 285 WGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEFHTCAITATGDLYTWGDGTHNA 344
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG N+ + + P R+SG + +V +S G H++ IT G+LY +G + G LG G
Sbjct: 345 GLLGHGSNVSHWI-PKRVSGPLEGLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHG 403
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV---------TGGGKVLSWGAGGSGRL 209
+ + I P +VE L G+ T + G + AV T GK+ +WG G RL
Sbjct: 404 NR--ETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRL 461
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG SS L P + L ID N + G
Sbjct: 462 GHGDRSSKL---------KPTCVPSL-----------------IDYNFHKAVCG------ 489
Query: 270 MLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 329
H L + G ++T GS+ G LG + D + P V+ V +V+CG
Sbjct: 490 -------HTLTIGLTTSGHIFTAGSSVYGQLGNPNNDGRY-PRLVEEKLGGGGVVEVACG 541
Query: 330 WKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 388
H A +++ G++ TWG G + G+LGHG+ D PT V + +
Sbjct: 542 AYHVAVLTQSGEVYTWGKGAN------------GRLGHGDIADRKTPTFVEALRDRSVKR 589
Query: 389 VSCGFNHTGALLEY 402
++CG T A+ ++
Sbjct: 590 IACGSGFTAAICQH 603
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 118/272 (43%), Gaps = 60/272 (22%)
Query: 142 GELYMWG--------KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G++Y+WG + + AA I +P +E + A G + + VT
Sbjct: 218 GDVYVWGEVMCDTTCRQGSDSNAYSATAATDILVPKPLESNVMLDVSYVACGVKHAALVT 277
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
+V +WG SGRLGHG +SI + PRL++ L V+ A G H+ I
Sbjct: 278 RQAEVFTWGEECSGRLGHGAGTSI---------FQPRLVESLSICNVETIACGEFHTCAI 328
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH-SPE 312
G +Y +GD G++ G LG GS +V H P+
Sbjct: 329 TATGDLYTWGD----------------------------GTHNAGLLGHGS-NVSHWIPK 359
Query: 313 RVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
RV GP V VSCG HTA I S GK+ T+G GTF G LGHGN
Sbjct: 360 RVSGPLEGLQVSAVSCGTWHTALITSSGKLYTFG----DGTF--------GVLGHGNRET 407
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
+P V + ++ + VSCG HT A++E +
Sbjct: 408 ISYPKEVESLKGLRTISVSCGVWHTAAVVEVI 439
>gi|417411454|gb|JAA52162.1| Putative alpha-tubulin suppressor, partial [Desmodus rotundus]
Length = 534
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 141/301 (46%), Gaps = 49/301 (16%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 61 LGTGDNQSTLIPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 119
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 120 NQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQ--PT 177
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + ++
Sbjct: 178 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN---------NVNQ 228
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
TP V++AA LHS C+++ + G +A +L
Sbjct: 229 LTP----------VRVAA---LHSVCVNQ----IVCG-------------YAHTLALTDE 258
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTW 344
G LY WG+N G LG G+ + L SP + E V+ +C HT+A G + W
Sbjct: 259 GLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMW 317
Query: 345 G 345
G
Sbjct: 318 G 318
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 106 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCG 165
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 166 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 224
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 225 NVNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 282
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 283 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 318
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 138/312 (44%), Gaps = 51/312 (16%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T + E++++G N + LG G + + IP K+E
Sbjct: 20 LSPQEIASIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--IPKKLE 76
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 77 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 133
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V A G HS + +G V+ +G ++ G+ A +P+
Sbjct: 134 IKQVVEV-----ACGSHHSVALAADGEVFAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 186
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV S V+Q+
Sbjct: 187 IKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNVNQLTPVRVAALHSVC-VNQI 245
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG ++ GQLG GN + + P + +
Sbjct: 246 VCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHIMVEKERVV 294
Query: 387 LQVSCGFNHTGA 398
+C HT A
Sbjct: 295 EIAACHSAHTSA 306
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 212 WGYNGNGQLGLGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 271
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 272 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 323
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T + C +F
Sbjct: 324 -SVILPHLTHLSCTDDVF 340
>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
Length = 1059
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 155/364 (42%), Gaps = 58/364 (15%)
Query: 43 WGNGDYGRLGLGSLE--SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG + G+L +G E S P S ++ +K ++CG HTL +T+ G +Y+ G N++
Sbjct: 7 WGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGSNEY 66
Query: 101 GQLGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG S+ + + L S +V+Q + G S IT GE++ WG+N GQLG
Sbjct: 67 GELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRNDKGQLG 126
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
GK + + P ++ L+ Q G +A+T G++ SWG G+LG G S
Sbjct: 127 RGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRLFSWGCNKYGQLGLGSSHS 186
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
TP+ I L G+ + A+G GN
Sbjct: 187 F--------HDTPQQIVCLRGIPIAQIASG----------------------------GN 210
Query: 277 HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 336
H+ L ++ WG N G LG+ P + V +SCG HT A+
Sbjct: 211 HSF--ILTWSRAVFGWGKNSFGQLGLNDEYDKSHPTLCKS-LRNQKVMYISCGEDHTVAL 267
Query: 337 S-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
+ EG + ++G GG GQLGH + + I P V QV+CG H
Sbjct: 268 TKEGGVFSFGAGGF------------GQLGHNSTQNEILPKRVMELMGSVISQVACGRRH 315
Query: 396 TGAL 399
T A
Sbjct: 316 TVAF 319
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 152/354 (42%), Gaps = 48/354 (13%)
Query: 43 WGNGDYGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG D G+LG G L E +P + + ++ + CG H L LT+ G +++ G N +
Sbjct: 117 WGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRLFSWGCNKY 176
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+ + + P +I L+ + QI++G +HS +T ++ WGKNS GQLGL
Sbjct: 177 GQLGLGSSHSFHDTPQQIVCLRGIPIAQIASGGNHSFILTWSRAVFGWGKNSFGQLGLND 236
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ K PT + L + G + +VA+T G V S+GAGG G+LGH
Sbjct: 237 EYDK--SHPTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLGHNS------ 288
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +E P+ + EL G + A G H+
Sbjct: 289 ---TQNEILPKRVMELMGSVISQVACGRRHTVAFSP------------------------ 321
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
S G++Y +GS +G LG+G +SP + P S ++S H ++
Sbjct: 322 -----SSGKMYAFGSGGSGQLGLGDTSARNSPFPILSPNFPSTGRRLSQVMDHDGSLYLV 376
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD---YIHPTIVNFGENVKALQVS 390
K L GG H GG+ +VD I E +K+LQ+
Sbjct: 377 KHLY--SGGDHCLLLARNAEMGGEPDDFREVDPSTQITTLTAEKCEKIKSLQLD 428
>gi|387540886|gb|AFJ71070.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
mulatta]
Length = 1020
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 142/309 (45%), Gaps = 42/309 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L + G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA------LSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P I L+ + V + G H+A + ++G+V+ FGD + ++ + R P
Sbjct: 221 PVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQ 280
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
L+ ER+ G V Q+ CG HT A + G+
Sbjct: 281 LV---------------------------ERIDG-----LVSQIDCGSYHTLAYVHTTGQ 308
Query: 341 ILTWGWGGS 349
++++G G S
Sbjct: 309 VISFGHGPS 317
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 125/282 (44%), Gaps = 56/282 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRGELPEPIQALETLNVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G HS + ++ +V ++WG N +G LG+G
Sbjct: 134 SCGHYHSLALSKDSQV------------------------------FSWGKNSHGQLGLG 163
Query: 304 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
+ SP+RV+ P+ QV+ G H+ A+S ++GWG +S G
Sbjct: 164 KEVPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLCGT-SFGWGS----------NSAG 211
Query: 363 QL---GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QL G V P + +N+ + +SCG HT L++
Sbjct: 212 QLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQ 253
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 111/233 (47%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P + L + + G E + + GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ +I + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 86/168 (51%), Gaps = 6/168 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG + S+ P + E L +A GGAH+ L+ G + G N G
Sbjct: 152 WGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAG 211
Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N+ S +PL I LK V+ IS G H++ + DG+++ +G NS+GQLG
Sbjct: 212 QLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYS 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
K P VE + G+ ++ + V G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFGHGPS 317
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 82/202 (40%), Gaps = 38/202 (18%)
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ E R + G ++ AA+G HS + N RV GD + ++ + P
Sbjct: 8 DSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPE 67
Query: 283 LISG----------------------GELYTWGSNENGCLGIGSI-DVLHSPERVQGPFS 319
I G ++ WG+ G LGIG ++ +P+++ +
Sbjct: 68 PIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT-LN 126
Query: 320 ESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTI 377
+ QVSCG H+ A+S + ++ +W G +S GQLG G +V P
Sbjct: 127 GIKIIQVSCGHYHSLALSKDSQVFSW------------GKNSHGQLGLGKEVPSQASPQR 174
Query: 378 VNFGENVKALQVSCGFNHTGAL 399
V E + QV+ G H+ AL
Sbjct: 175 VRSLEGIPLAQVAAGGAHSFAL 196
>gi|384939244|gb|AFI33227.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
mulatta]
Length = 1020
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 142/309 (45%), Gaps = 42/309 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L + G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA------LSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P I L+ + V + G H+A + ++G+V+ FGD + ++ + R P
Sbjct: 221 PVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQ 280
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
L+ ER+ G V Q+ CG HT A + G+
Sbjct: 281 LV---------------------------ERIDG-----LVSQIDCGSYHTLAYVHTTGQ 308
Query: 341 ILTWGWGGS 349
++++G G S
Sbjct: 309 VISFGHGPS 317
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 125/282 (44%), Gaps = 56/282 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRGELPEPIQALETLNVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G HS + ++ +V ++WG N +G LG+G
Sbjct: 134 SCGHYHSLALSKDSQV------------------------------FSWGKNSHGQLGLG 163
Query: 304 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
+ SP+RV+ P+ QV+ G H+ A+S ++GWG +S G
Sbjct: 164 KEVPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLCGT-SFGWGS----------NSAG 211
Query: 363 QL---GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QL G V P + +N+ + +SCG HT L++
Sbjct: 212 QLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQ 253
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 82/202 (40%), Gaps = 38/202 (18%)
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ E R + G ++ AA+G HS + N RV GD + ++ + P
Sbjct: 8 DSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPE 67
Query: 283 LISG----------------------GELYTWGSNENGCLGIGSI-DVLHSPERVQGPFS 319
I G ++ WG+ G LGIG ++ +P+++ +
Sbjct: 68 PIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT-LN 126
Query: 320 ESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTI 377
+ QVSCG H+ A+S + ++ +W G +S GQLG G +V P
Sbjct: 127 GIKIIQVSCGHYHSLALSKDSQVFSW------------GKNSHGQLGLGKEVPSQASPQR 174
Query: 378 VNFGENVKALQVSCGFNHTGAL 399
V E + QV+ G H+ AL
Sbjct: 175 VRSLEGIPLAQVAAGGAHSFAL 196
>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
Length = 5077
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 178/387 (45%), Gaps = 57/387 (14%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 4219 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4276
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ + +++ P + L+ V+ +++G H A+T DGE+Y WG+ +G+LG
Sbjct: 4277 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH 4335
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 4336 GNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4389
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4390 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4444
Query: 276 NHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + P +L G +YTWG + LG GS++ + P++
Sbjct: 4445 DGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVEHVRRPKK 4504
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V + ++ G H A S+ G++ TW G + GQLG G
Sbjct: 4505 VAA-LQGKKIISIATGSLHCVACSDAGEVFTW------------GDNDEGQLGDGTVTAI 4551
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGAL 399
P +V + ++V+CG HT AL
Sbjct: 4552 QRPRLVAALQGKHIVKVTCGSAHTLAL 4578
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 145/317 (45%), Gaps = 56/317 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 3172 WGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGR 3231
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L + V+Q++ G + A+T DG ++ WG G+LG G
Sbjct: 3232 LGHGDN-ATQLKPKLVAALSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3290
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3291 SEGSSTP--HEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3346
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ I L G +V A G LH C+
Sbjct: 3347 -------RKPQPIAGLRGHRVIHVAVGALH--CL-------------------------- 3371
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
++ G++Y WG N++G G G+ V P V G V++V+CG H+ A
Sbjct: 3372 --AVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG-LDAVIVNRVACGSSHSMA---- 3424
Query: 340 KILTWGWGGSHGTFSED 356
WG + + E+
Sbjct: 3425 ------WGLPNASLDEE 3435
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 134/303 (44%), Gaps = 48/303 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + S+ +ACG AH+ +T +G V G +G+
Sbjct: 4325 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4384
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4385 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4442
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4443 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVEHV-- 4499
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P+ + L+G K+ A G LH AC D
Sbjct: 4500 -------RRPKKVAALQGKKIISIATGSLHCVACSD------------------------ 4528
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
GE++TWG N+ G LG G++ + P R+ + +V+CG HT A+S
Sbjct: 4529 -------AGEVFTWGDNDEGQLGDGTVTAIQRP-RLVAALQGKHIVKVTCGSAHTLALST 4580
Query: 339 GKI 341
++
Sbjct: 4581 SQL 4583
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 159/349 (45%), Gaps = 54/349 (15%)
Query: 79 GGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF+ ++ G VYA G G+LG+ L P ++ L + VV+ + +G H
Sbjct: 3101 GGSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 3159
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+T+DG+++ WG+ +G+LG G ++ + P VE L + A G S A++
Sbjct: 3160 ALALTLDGKVFSWGEGEDGKLGHGNRS--TLDKPRLVEALRAKKIRDIACGSSHSAAISS 3217
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG + ++ P+L+ L G +V A G +
Sbjct: 3218 QGELYTWGLGEYGRLGHGDNA---------TQLKPKLVAALSGRRVIQVACGSRDAQTLA 3268
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRP----------------------SLISGGELY 290
+ E+G V+ +GD K+ + P +L GE++
Sbjct: 3269 LTEDGAVFSWGDGDFGKLGRGGSEGSSTPHEIERLSGIGVIQIECGAQFSLALTRAGEVW 3328
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG G + P+ + G V V+ G H A+++ G++ WG
Sbjct: 3329 TWGKGDYYRLGHGGDQHVRKPQPIAG-LRGHRVIHVAVGALHCLAVTDAGQVYAWG---- 3383
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G GN P +V + V +V+CG +H+ A
Sbjct: 3384 -----DNDH---GQQGSGNTFVNKKPALVIGLDAVIVNRVACGSSHSMA 3424
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 150/342 (43%), Gaps = 52/342 (15%)
Query: 88 ETGC-VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYM 146
E C V GLND QLG + + + + + I+ G ++ DG++Y
Sbjct: 3058 ELPCTVMVWGLNDKEQLGGLKGSKVKVPTFSPTISRLRPIHIAGGSKSLFVVSQDGKVYA 3117
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAG 204
G+ +NG+LGLG +P+P ++ L K+ A+ G + ++A+T GKV SWG G
Sbjct: 3118 CGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEG 3175
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF-- 262
G+LGHG S++ PRL++ L K++ A G HSA I G +Y +
Sbjct: 3176 EDGKLGHGNRSTL---------DKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGL 3226
Query: 263 --------GDRAVD-----------KMLFQEG---NHARRPSLISGGELYTWGSNENGCL 300
GD A + + Q A+ +L G +++WG + G L
Sbjct: 3227 GEYGRLGHGDNATQLKPKLVAALSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKL 3286
Query: 301 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHS 359
G G + +P ++ S V Q+ CG + + A++ G++ TWG G +
Sbjct: 3287 GRGGSEGSSTPHEIER-LSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYY--------- 3336
Query: 360 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHG D P + + + V+ G H A+ +
Sbjct: 3337 ---RLGHGGDQHVRKPQPIAGLRGHRVIHVAVGALHCLAVTD 3375
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 109/227 (48%), Gaps = 24/227 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG G ++ +P + +A + +ACG A TL LTE G V++ G DF
Sbjct: 3224 WGLGEYGRLGHGDNATQLKPKLVAALSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDF 3283
Query: 101 GQLGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG SE E R+SG+ V+QI G S A+T GE++ WGK +LG G
Sbjct: 3284 GKLGRGGSEGSSTPHEIERLSGIG--VIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG 3341
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ + P + L G A+G +AVT G+V +WG HGQ+ S
Sbjct: 3342 GD--QHVRKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQVYAWGDN-----DHGQQGSGN 3394
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-------ACIDENGR 258
F+ P L+ L+ V V A G HS A +DE R
Sbjct: 3395 TFVNK----KPALVIGLDAVIVNRVACGSSHSMAWGLPNASLDEEKR 3437
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 4/169 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
WG G YGRLG G+ + + P + A + H + AL G AHTL LT G V+A G D+
Sbjct: 721 WGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDY 780
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + + SL P I L + V ++ G S A++ +G+LY WGK S L ++
Sbjct: 781 GKLG-NGSCNSSLLPQLIDCLPR-VQRVFAGAQFSLALSCEGQLYSWGKASCLGHQLVER 838
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
+ +P + L A+G +A++ G++ WG + ++
Sbjct: 839 NVQGCSVPRLITGLQHKRIVDVAVGVAHCLALSSSGEIFGWGRNDNQQI 887
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 115/269 (42%), Gaps = 43/269 (15%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
C G H L + Y+ G+ D +LG + L P +I L + V + G +S+A
Sbjct: 653 CEGRHFLAVDSNFNAYSWGVGDSRRLGHGDCHAREL-PTKIESLVRLVKSVYCGCSYSAA 711
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGG 195
IT+ G LY WG+ + G+LG G + +P V L ALG ++ +T
Sbjct: 712 ITLGGNLYTWGRGTYGRLGHGTSDDQC--LPAMVMALKDHQVVDVALGSGDAHTLCLTSE 769
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG G G+LG+G +S L P+LI L V+ A A F S +
Sbjct: 770 GLVFAWGDGDYGKLGNGSCNSSL---------LPQLIDCLPRVQRVFAGAQF--SLALSC 818
Query: 256 NGRVYIFGDRAV--DKMLFQEGNHARRPSLISG----------------------GELYT 291
G++Y +G + +++ + P LI+G GE++
Sbjct: 819 EGQLYSWGKASCLGHQLVERNVQGCSVPRLITGLQHKRIVDVAVGVAHCLALSSSGEIFG 878
Query: 292 WGSNENGCLGIGSI---DVLHSPERVQGP 317
WG N+N + S+ +L P +V P
Sbjct: 879 WGRNDNQQICPASVCSEPLLRQPIQVTLP 907
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 105/252 (41%), Gaps = 57/252 (22%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG N GQLG G + ++ I PT E LS + Q A G + AVT GK+ + G
Sbjct: 4216 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4273
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
LG S S P L+ L+ V VK A +G H + +G VY
Sbjct: 4274 ---------GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYA 4324
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+G+ E+G LG G+ P+ V+ S
Sbjct: 4325 WGE------------------------------GEDGKLGHGNRMSYDRPKLVEHLNGMS 4354
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
D ++CG H+AAI+ G +LTWG G G+LGHG+ D + P +V
Sbjct: 4355 VAD-IACGSAHSAAITASGHVLTWGKG------------RYGRLGHGDSEDQLRPKLVEA 4401
Query: 381 GENVKALQVSCG 392
+A+ ++CG
Sbjct: 4402 LLGYRAIDIACG 4413
>gi|159037173|ref|YP_001536426.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157916008|gb|ABV97435.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 569
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 147/328 (44%), Gaps = 38/328 (11%)
Query: 43 WGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ YG+LG G+ + R P+ + + A A G AH+L +T G V A G N G
Sbjct: 67 WGDNYYGQLGDGTTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVTSAGTVLAWGRNAVG 126
Query: 102 QLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG I S P+ + V ++ G++HS A+T G ++ WG NS GQLG G +
Sbjct: 127 QLGDGTTINRS-TPVDVRLPPGTTVTAVAAGFNHSLALTSAGTVFAWGDNSTGQLGDGTR 185
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P+ V SG A G S+A+T G V +WG +G+LG G
Sbjct: 186 TNRSTPV--AVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQLGDGTR------ 237
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEG 275
T+ TP ++ G V A G HS + G +G+ V ++ + ++
Sbjct: 238 ---TNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQLGDGSNINRDA 294
Query: 276 N-HARRP----------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
+ H R P +L S G + +WGSN G LG G+ ++P V P
Sbjct: 295 SVHVRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDGTARDRNTPGSVSLPP 354
Query: 319 SESPVDQVSCGWKHTAAI-SEGKILTWG 345
+ + V+ G A+ S G +L WG
Sbjct: 355 GVT-ITAVAAGDLFGLALTSAGTVLAWG 381
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 145/356 (40%), Gaps = 57/356 (16%)
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
V SA +H+ A T+ + V A G N +GQLG Y P+ + GL K
Sbjct: 39 VSSAIAQHTSVAQHRPSPTTV---ASDAVLAWGDNYYGQLGDGTTNNYRTVPIPV-GLPK 94
Query: 124 --EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
EV + G HS A+T G + WG+N+ GQLG G + P+ V G
Sbjct: 95 GTEVTAAAGGDAHSLAVTSAGTVLAWGRNAVGQLGDGTTINRSTPV--DVRLPPGTTVTA 152
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
A GF S+A+T G V +WG +G+LG G T+ TP + G +
Sbjct: 153 VAAGFNHSLALTSAGTVFAWGDNSTGQLGDGTR---------TNRSTPVAVSFPSGTVIT 203
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI----------------- 284
AAG +HS + G V+ +GD + ++ +G R + +
Sbjct: 204 AVAAGGMHSLALTSAGTVFAWGDNSTGQL--GDGTRTNRSTPVVVGLPVGTIVTAIAGGG 261
Query: 285 -------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 336
S G WG+N G LG GS + V+ P + V V+ G H+ A+
Sbjct: 262 SHSLAVTSAGNARAWGNNFVGQLGDGSNINRDASVHVRLPPGTT-VTAVAGGLTHSLALT 320
Query: 337 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
S G +L+W G ++ GQLG G D P V+ V V+ G
Sbjct: 321 SVGTVLSW------------GSNNWGQLGDGTARDRNTPGSVSLPPGVTITAVAAG 364
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 121/294 (41%), Gaps = 39/294 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R PV ++ A+A G H+L LT G V+A G N GQ
Sbjct: 120 WGRNAVGQLGDGTTINRSTPVDVRLPPGTTVTAVAAGFNHSLALTSAGTVFAWGDNSTGQ 179
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG S P+ +S V+ ++ G HS A+T G ++ WG NS GQLG G +
Sbjct: 180 LGDGTRTNRS-TPVAVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQLGDGTRT 238
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ V G A G S+AVT G +WG G+LG G
Sbjct: 239 NRSTPV--VVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQLGDGSN-----IN 291
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR---------AVDKMLF 272
R S + ++ G V A G HS + G V +G A D+
Sbjct: 292 RDASVH----VRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDGTARDRN-- 345
Query: 273 QEGNHARRP---------------SLISGGELYTWGSNENGCLGIGSIDVLHSP 311
G+ + P +L S G + WG N G LG G+ V +P
Sbjct: 346 TPGSVSLPPGVTITAVAAGDLFGLALTSAGTVLAWGGNIVGQLGDGTTTVRRTP 399
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 59/134 (44%), Gaps = 12/134 (8%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A WGN G+LG GS +R V ++ A+A G H+L LT G V + G N+
Sbjct: 273 ARAWGNNFVGQLGDGSNINRDASVHVRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNN 332
Query: 100 FGQLGI----SENI--GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
+GQLG N SL P + ++ G A+T G + WG N G
Sbjct: 333 WGQLGDGTARDRNTPGSVSLPP------GVTITAVAAGDLFGLALTSAGTVLAWGGNIVG 386
Query: 154 QLGLGKKAAKVIPI 167
QLG G + P+
Sbjct: 387 QLGDGTTTVRRTPV 400
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 51/124 (41%), Gaps = 13/124 (10%)
Query: 277 HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 336
H P+ ++ + WG N G LG G+ + + G + V + G H+ A+
Sbjct: 52 HRPSPTTVASDAVLAWGDNYYGQLGDGTTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAV 111
Query: 337 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
S G +L WG ++ GQLG G ++ P V V+ GFNH
Sbjct: 112 TSAGTVLAWG------------RNAVGQLGDGTTINRSTPVDVRLPPGTTVTAVAAGFNH 159
Query: 396 TGAL 399
+ AL
Sbjct: 160 SLAL 163
>gi|355569557|gb|EHH25458.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca mulatta]
Length = 1020
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 142/309 (45%), Gaps = 42/309 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L + G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA------LSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P I L+ + V + G H+A + ++G+V+ FGD + ++ + R P
Sbjct: 221 PVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQ 280
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
L+ ER+ G V Q+ CG HT A + G+
Sbjct: 281 LV---------------------------ERIDG-----LVSQIDCGSYHTLAYVHTTGQ 308
Query: 341 ILTWGWGGS 349
++++G G S
Sbjct: 309 VISFGHGPS 317
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 125/282 (44%), Gaps = 56/282 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRGELPEPIQALETLNVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G HS + ++ +V ++WG N +G LG+G
Sbjct: 134 SCGHYHSLALSKDSQV------------------------------FSWGKNSHGQLGLG 163
Query: 304 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
+ SP+RV+ P+ QV+ G H+ A+S ++GWG +S G
Sbjct: 164 KEVPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLCGT-SFGWGS----------NSAG 211
Query: 363 QL---GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QL G V P + +N+ + +SCG HT L++
Sbjct: 212 QLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQ 253
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 82/202 (40%), Gaps = 38/202 (18%)
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ E R + G ++ AA+G HS + N RV GD + ++ + P
Sbjct: 8 DSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPE 67
Query: 283 LISG----------------------GELYTWGSNENGCLGIGSI-DVLHSPERVQGPFS 319
I G ++ WG+ G LGIG ++ +P+++ +
Sbjct: 68 PIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT-LN 126
Query: 320 ESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTI 377
+ QVSCG H+ A+S + ++ +W G +S GQLG G +V P
Sbjct: 127 GIKIIQVSCGHYHSLALSKDSQVFSW------------GKNSHGQLGLGKEVPSQASPQR 174
Query: 378 VNFGENVKALQVSCGFNHTGAL 399
V E + QV+ G H+ AL
Sbjct: 175 VRSLEGIPLAQVAAGGAHSFAL 196
>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
Length = 5062
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 178/387 (45%), Gaps = 57/387 (14%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 4204 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPIQLA-GGEQSLFAVTPDGKLFATGYGSG 4261
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ + +++ P + L+ V+ +++G H A+T DGE+Y WG+ +G+LG
Sbjct: 4262 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH 4320
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P +E L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 4321 GNRMS--YDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4374
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4375 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4429
Query: 276 NHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + P +L G +YTWG + LG GS+D + P++
Sbjct: 4430 DGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKK 4489
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V + ++ G H A S+ G++ TW G + GQLG G
Sbjct: 4490 VAA-LQGKKIISIATGSLHCVACSDAGEVYTW------------GDNDEGQLGDGTVTAI 4536
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGAL 399
P +V + ++V+CG HT AL
Sbjct: 4537 QRPRLVAALQGKHIVKVTCGSAHTLAL 4563
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 145/317 (45%), Gaps = 56/317 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 3156 WGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGR 3215
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L + V+Q++ G + A+T DG ++ WG G+LG G
Sbjct: 3216 LGHGDN-ATQLKPKLVTALHGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3274
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3275 SEGSATP--HEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3330
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ I L G +V A G LH C+
Sbjct: 3331 -------RKPQPIAGLRGRRVIHVAVGALH--CL-------------------------- 3355
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
++ G++Y WG N++G G G+ V P V G V++V+CG H+ A
Sbjct: 3356 --AVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG-LDAVFVNRVACGSSHSMA---- 3408
Query: 340 KILTWGWGGSHGTFSED 356
WG + + E+
Sbjct: 3409 ------WGLPNASLDEE 3419
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 134/303 (44%), Gaps = 48/303 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + S+ +ACG AH+ +T +G V G +G+
Sbjct: 4310 WGEGEDGKLGHGNRMSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4369
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4370 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4427
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4428 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4484
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P+ + L+G K+ A G LH AC D
Sbjct: 4485 -------RRPKKVAALQGKKIISIATGSLHCVACSD------------------------ 4513
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
GE+YTWG N+ G LG G++ + P R+ + +V+CG HT A+S
Sbjct: 4514 -------AGEVYTWGDNDEGQLGDGTVTAIQRP-RLVAALQGKHIVKVTCGSAHTLALST 4565
Query: 339 GKI 341
++
Sbjct: 4566 SQL 4568
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 152/353 (43%), Gaps = 74/353 (20%)
Query: 88 ETGC-VYATGLNDFGQLG-----------ISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
E C V GLND QLG S+ I L P+ I+G K + +S
Sbjct: 3042 ELPCTVMVWGLNDKEQLGGLKGSKVKVPTFSQTIS-RLRPIHIAGGSKSLFVVSQ----- 3095
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVT 193
DG++Y G+ +NG+LGLG +P+P ++ L K+ A+ G + ++A+T
Sbjct: 3096 -----DGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT 3148
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
GKV SWG G G+LGHG S++ PRL++ L K++ A G HSA I
Sbjct: 3149 LDGKVFSWGEGEDGKLGHGNRSTL---------DKPRLVEALRAKKIRDIACGSSHSAAI 3199
Query: 254 DENGRVYIF----------GDRAVD-KMLFQEGNHARRP-------------SLISGGEL 289
G +Y + GD A K H RR +L G +
Sbjct: 3200 SSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALHGRRVIQVACGSRDAQTLALTEDGAV 3259
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGG 348
++WG + G LG G + +P ++ S V Q+ CG + + A++ G++ TWG G
Sbjct: 3260 FSWGDGDFGKLGRGGSEGSATPHEIER-LSGIGVIQIECGAQFSLALTRAGEVWTWGKGD 3318
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG D P + + + V+ G H A+ +
Sbjct: 3319 YY------------RLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTD 3359
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 159/349 (45%), Gaps = 54/349 (15%)
Query: 79 GGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF+ ++ G VYA G G+LG+ L P ++ L + VV+ + +G H
Sbjct: 3085 GGSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 3143
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+T+DG+++ WG+ +G+LG G ++ + P VE L + A G S A++
Sbjct: 3144 ALALTLDGKVFSWGEGEDGKLGHGNRS--TLDKPRLVEALRAKKIRDIACGSSHSAAISS 3201
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG + ++ P+L+ L G +V A G +
Sbjct: 3202 QGELYTWGLGEYGRLGHGDNA---------TQLKPKLVTALHGRRVIQVACGSRDAQTLA 3252
Query: 253 IDENGRVYIFGDRAVDKM----------------------LFQEGNHARRPSLISGGELY 290
+ E+G V+ +GD K+ + E +L GE++
Sbjct: 3253 LTEDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVW 3312
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG G + P+ + G V V+ G H A+++ G++ WG
Sbjct: 3313 TWGKGDYYRLGHGGDQHVRKPQPIAG-LRGRRVIHVAVGALHCLAVTDAGQVYAWG---- 3367
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G GN P +V + V +V+CG +H+ A
Sbjct: 3368 -----DNDH---GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSMA 3408
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 109/227 (48%), Gaps = 24/227 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG G ++ +P + +A + +ACG A TL LTE G V++ G DF
Sbjct: 3208 WGLGEYGRLGHGDNATQLKPKLVTALHGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDF 3267
Query: 101 GQLGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG SE E R+SG+ V+QI G S A+T GE++ WGK +LG G
Sbjct: 3268 GKLGRGGSEGSATPHEIERLSGIG--VIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG 3325
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ + P + L G A+G +AVT G+V +WG HGQ+ S
Sbjct: 3326 GD--QHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN-----DHGQQGSGN 3378
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-------ACIDENGR 258
F+ P L+ L+ V V A G HS A +DE R
Sbjct: 3379 TFVNK----KPALVIGLDAVFVNRVACGSSHSMAWGLPNASLDEEKR 3421
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 85/162 (52%), Gaps = 4/162 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
WG G YGRLG G+ + + P + A + H + AL G AHTL LT G VYA G D+
Sbjct: 692 WGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLTRGGLVYAWGDGDY 751
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + + SL+PL I L + V ++ G S A+T +G+LY WGK S L ++
Sbjct: 752 GKLG-NGSCNSSLQPLLIECLPR-VQRVFAGSQFSLALTCEGQLYSWGKASCLGHQLVER 809
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+ +P + L A+G +A++ G++ WG
Sbjct: 810 NVQGCSVPRLITSLQHKRIVHVAVGVAHCLALSSNGEIFGWG 851
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 16/224 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD RLG G +R P + + ++++ CG +++ +T G +Y G +G+
Sbjct: 641 WGVGDSRRLGHGDCHARELPTKIESLVRR-VQSVYCGCSYSAAITLRGNLYTWGRGTYGR 699
Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + + ++ +V+ ++ +G H+ +T G +Y WG G+LG G
Sbjct: 700 LGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLTRGGLVYAWGDGDYGKLGNGSC 759
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILG 219
+ + P+ +ECL + ++ G + S+A+T G++ SWG LGH E ++ G
Sbjct: 760 NSSLQPL--LIECLPRV--QRVFAGSQFSLALTCEGQLYSWGKASC--LGHQLVERNVQG 813
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
PRLI L+ ++ A G H + NG ++ +G
Sbjct: 814 C------SVPRLITSLQHKRIVHVAVGVAHCLALSSNGEIFGWG 851
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 115/265 (43%), Gaps = 35/265 (13%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
C G H L + Y+ G+ D +LG + L P +I L + V + G +S+A
Sbjct: 624 CEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHAREL-PTKIESLVRRVQSVYCGCSYSAA 682
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGG 195
IT+ G LY WG+ + G+LG G + +P V L ALG ++ +T G
Sbjct: 683 ITLRGNLYTWGRGTYGRLGHGNSDDQC--MPAMVMALKDHQVLDVALGSGDAHTLCLTRG 740
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA--AAGFLHSACI 253
G V +WG G G+LG+G +S L L E PR+ + G + +A G L+S
Sbjct: 741 GLVYAWGDGDYGKLGNGSCNSSLQPL--LIECLPRVQRVFAGSQFSLALTCEGQLYSW-- 796
Query: 254 DENGRVYIFGDRAVDK--------MLFQEGNHARRP----------SLISGGELYTWGSN 295
G+ G + V++ L H R +L S GE++ WG N
Sbjct: 797 ---GKASCLGHQLVERNVQGCSVPRLITSLQHKRIVHVAVGVAHCLALSSNGEIFGWGRN 853
Query: 296 ENGCLGIGSI---DVLHSPERVQGP 317
+N + S+ +L P +V P
Sbjct: 854 DNQQICPASVCSEPLLRQPIQVTLP 878
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 124/335 (37%), Gaps = 105/335 (31%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG------------------ 185
+Y WG N GQLG G + ++ I PT E LS + Q A G
Sbjct: 4201 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPIQLAGGEQSLFAVTPDGKLFATGY 4258
Query: 186 --------------------------FEQSVAVTGGGK----------VLSWGAGGSGRL 209
F + VAV GGK V +WG G G+L
Sbjct: 4259 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKL 4318
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S P+L++ L G+ V A G HSA I +G V +G +
Sbjct: 4319 GHGNRMSY---------DRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4369
Query: 270 MLFQEGNHARRPSLISG------------------------GELYTWGSNENGCLGIGSI 305
+ + RP L+ +++WG + G LG G
Sbjct: 4370 LGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4429
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 364
D P +++ + V +V CG + + A+++ G + TWG G H +L
Sbjct: 4430 DGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFH------------RL 4476
Query: 365 GHGNDVDYI-HPTIVNFGENVKALQVSCGFNHTGA 398
GHG+ VD++ P V + K + ++ G H A
Sbjct: 4477 GHGS-VDHVRRPKKVAALQGKKIISIATGSLHCVA 4510
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 104/269 (38%), Gaps = 58/269 (21%)
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H A+ + Y WG + +LG G A+ +PTK+E L + G S A+T
Sbjct: 628 HFLAVDSNHNAYSWGVGDSRRLGHGDCHAR--ELPTKIESLVR-RVQSVYCGCSYSAAIT 684
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSA 251
G + +WG G GRLGHG S + P ++ L+ +V A +G H+
Sbjct: 685 LRGNLYTWGRGTYGRLGHGN---------SDDQCMPAMVMALKDHQVLDVALGSGDAHTL 735
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSP 311
C L GG +Y WG + G LG GS + P
Sbjct: 736 C------------------------------LTRGGLVYAWGDGDYGKLGNGSCNSSLQP 765
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
++ V +V G + + A++ EG++ +WG G QL N
Sbjct: 766 LLIE---CLPRVQRVFAGSQFSLALTCEGQLYSWG----------KASCLGHQLVERNVQ 812
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHTGAL 399
P ++ ++ + + V+ G H AL
Sbjct: 813 GCSVPRLITSLQHKRIVHVAVGVAHCLAL 841
>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
gallopavo]
Length = 4815
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 137/301 (45%), Gaps = 46/301 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G ++ G +G+
Sbjct: 4044 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGR 4103
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4104 LGHGDSED-QLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4161
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4162 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4218
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4219 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4249
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ +++V+CG HT A S
Sbjct: 4250 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACGSAHTLAWSTS 4300
Query: 340 K 340
K
Sbjct: 4301 K 4301
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 138/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3051 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3110
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3111 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3168
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3169 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV-- 3225
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + + G+VY
Sbjct: 3226 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVY------------------- 3259
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3260 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3303
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 155/337 (45%), Gaps = 50/337 (14%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2941 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3000
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G ++A+T GK+ SWG G G+L
Sbjct: 3001 NGRLGLGISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKL 3059
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------ 263
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G
Sbjct: 3060 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3110
Query: 264 -----------DRAVDKMLFQE-------GNHARRPSLISGGELYTWGSNENGCLGIGSI 305
+ V +L A+ +L G +++WG + G LG G
Sbjct: 3111 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3170
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 364
+ + P+ ++ + V Q+ CG + + A+++ G + TWG G +L
Sbjct: 3171 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3217
Query: 365 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GHG DV P +V K + V+ G H A+ +
Sbjct: 3218 GHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3254
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 170/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3938 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3995
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3996 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4053
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S +T G + +WG G GRLGHG
Sbjct: 4054 HGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD--- 4108
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4109 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4162
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4163 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4222
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4223 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4269
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4270 IQRPRLVAALQGKKINRVACGSAHTLA 4296
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 162/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2979 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3038
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3039 AMALTVDGKIFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3096
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3097 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3147
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3148 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3207
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG G+ + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3208 TWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWG---- 3262
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3263 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3303
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 133/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L+ G V++ G D G+LG + + EP IS L K VV I+ G +
Sbjct: 481 GHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE-EPKLISALSGKQAGKHVVHIACGSTY 539
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ + G Q++AV
Sbjct: 540 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 597
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + + G S
Sbjct: 598 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 648
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 649 LTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVH 708
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ + PE P ++ KH I+ G ++ W
Sbjct: 709 SWGSNDQ-CQHFDTLRIT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 753
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + SA KH + +ACG ++ +T G +Y G
Sbjct: 496 WGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 554
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ +S +G + A+T +G+++ WG G+
Sbjct: 555 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 613
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V +WG G + RLGHG E
Sbjct: 614 LGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 671
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 672 EHV---------RYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 711
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 152/353 (43%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ +G P + L
Sbjct: 419 PIQCEGLASLGVVQIACAEKRFLILSRNGRVYTQAYN-------SDTLG----PQLVQSL 467
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A++ +GE++ WG G+LG G +P+ P + LSG
Sbjct: 468 ASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGD----TVPLEEPKLISALSG 523
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S + P
Sbjct: 524 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 571
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV + G GD A+ ++ G++
Sbjct: 572 MLVTGLKGLKVIDVSCGS---------------GD-------------AQTLAVTENGQV 603
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + + +V CG + + A++ +G++ TWG G
Sbjct: 604 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDIVKVRCGSQFSIALTKDGQVYTWGKGD 662
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 663 NQ------------RLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTE 703
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 114/258 (44%), Gaps = 52/258 (20%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2933 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2990
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 2991 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVA---VHSG---- 3035
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3036 -------------------GRHAM--ALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIE 3074
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AAI S G++ TWG G G+LGHG++ +
Sbjct: 3075 A-LKTKRIRDIACGSSHSAAITSSGELYTWGLG------------EYGRLGHGDNTTQLK 3121
Query: 375 PTIVNFGENVKALQVSCG 392
P +V + +QV+CG
Sbjct: 3122 PKMVKVLLGHRVIQVACG 3139
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 89/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E + P++ + + + ++CG A TL +TE G V++ G D+
Sbjct: 552 WGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDY 611
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ ++V++ G S A+T DG++Y WGK N +LG G
Sbjct: 612 GKLGRGGSDGCK-TPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGT 670
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 671 E--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 713
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 109/252 (43%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3933 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3990
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 3991 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4033
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4034 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 4073
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD ++ G H+A I+ G + TWG G G+LGHG+ D + P +V
Sbjct: 4074 VVD-IAAGGAHSACITAAGDLFTWGKG------------RYGRLGHGDSEDQLKPKLVEA 4120
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 4121 LQGYRVIDIACG 4132
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY G D +
Sbjct: 606 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQR 665
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
L G E++ Y P + GLK K+V+ ++ G H A+T D E++ WG N Q L
Sbjct: 666 LGHGTEEHVRY---PKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 722
Query: 156 GLGKKAAKVIP 166
+ K +P
Sbjct: 723 RITKPEPAALP 733
>gi|326496164|dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 907
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 159/373 (42%), Gaps = 72/373 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E P + + ++ +ACG HT +T TG +Y G ++
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAASNIDFVACGEFHTCAVTTTGELYTWGDGTHNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++G+ + P RISG + ++ +S G H++ IT G+L+ +G S G LG G
Sbjct: 161 GLLGHGTDVGHWI-PRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALG-----------FEQSVAVTGGGKVLSWGAGGSG 207
K I P +VE LSG+ T A G QS A GK+ +WG G
Sbjct: 220 N--VKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKH 277
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + + L P + L F AC
Sbjct: 278 RLGHGDKEARL---------KPTCVASLIDYD-------FYRVAC--------------- 306
Query: 268 DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
H+ L + G+++T G++ G LG + D P V+ + V Q++
Sbjct: 307 --------GHSLTVGLTTSGKVWTMGNSVYGQLGNPNSD--GRPCLVEDKIASEHVLQIA 356
Query: 328 CGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG H A + S ++ TWG G + G+LGHG+ D PT V +
Sbjct: 357 CGSYHVAVLTSRSEVFTWGKGAN------------GRLGHGDVEDRKVPTTVEALRDRAV 404
Query: 387 LQVSCGFNHTGAL 399
++CG N T A+
Sbjct: 405 RHIACGANFTAAI 417
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 127/301 (42%), Gaps = 70/301 (23%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H+S +T +GE++ WG++S G+LG G + V P VE
Sbjct: 69 KPLE-SNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG + + PR
Sbjct: 126 LAASNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTD---------VGHWIPRR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
I LEG+++ + G H+A I G+++ FGD +
Sbjct: 177 ISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSF----------------------- 213
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------------ 338
G LG G++ + P V+ S V+CG HTAAI E
Sbjct: 214 -------GVLGHGNVKSISCPREVES-LSGLKTIAVACGVWHTAAIVEVIVTQSSATVSA 265
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
GK+ TWG G H +LGHG+ + PT V + +V+CG + T
Sbjct: 266 GKLFTWGDGDKH------------RLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVG 313
Query: 399 L 399
L
Sbjct: 314 L 314
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 116/276 (42%), Gaps = 69/276 (25%)
Query: 142 GELYMWGK---------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
G++Y+WG+ +S+ + K ++P P + + ++ G + V
Sbjct: 35 GDVYVWGEVVCDNSARTSSDTVIRSTGKTDFLLPKPLESNLVLDVY--HVDCGVRHASLV 92
Query: 193 TGGGKVLSWGAGGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
T G+V +WG GRLGHG +E S+ PRL++ L + A G H+
Sbjct: 93 TRNGEVFTWGEDSGGRLGHGTREDSV----------HPRLVESLAASNIDFVACGEFHTC 142
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWG--SNENGCLGIGSIDVLH 309
+ + GELYTWG ++ G LG G+ DV H
Sbjct: 143 AV------------------------------TTTGELYTWGDGTHNVGLLGHGT-DVGH 171
Query: 310 -SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
P R+ GP + VSCG HTA I S G++ T+G G S G LGHG
Sbjct: 172 WIPRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDG------------SFGVLGHG 219
Query: 368 NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
N P V +K + V+CG HT A++E +
Sbjct: 220 NVKSISCPREVESLSGLKTIAVACGVWHTAAIVEVI 255
>gi|403263467|ref|XP_003924053.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1024
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 142/310 (45%), Gaps = 47/310 (15%)
Query: 44 GNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GR G RW P A + ++CG H+L + G V+A G GQ
Sbjct: 51 SRGQLGRRG----APRWDLPEPVQALKTLKFDLVSCGKEHSLAVCHKGRVFAWGAGSEGQ 106
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ E + P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 107 LGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEF 166
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 167 PSQ-PSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRN 219
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P I L+ + V + G H+A + ++G+V+ FGD + ++ + R P
Sbjct: 220 VQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEKRGP 279
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEG 339
L+ ER+ G V Q+ CG HT A + G
Sbjct: 280 QLV---------------------------ERIDG-----LVSQIDCGGDHTIAYVHTTG 307
Query: 340 KILTWGWGGS 349
+++++G G S
Sbjct: 308 QVVSFGRGPS 317
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 124/280 (44%), Gaps = 56/280 (20%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G H+ + + ++ G+NS GQLG ++ A +P V+ L + +
Sbjct: 24 ELLQAASGERHALLLLTNSLVHSCGENSRGQLG--RRGAPRWDLPEPVQALKTLKFDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TPR I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEI--------NFTPRKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G HS + ++ +V ++WG N +G LG+G
Sbjct: 134 SCGHYHSLALSKDSQV------------------------------FSWGKNSHGQLGLG 163
Query: 304 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
SP+RV+ P+ QV+ G H+ A+S ++GWG +S G
Sbjct: 164 KEFPSQPSPQRVRS-LEGIPLAQVAAGGAHSFALSLCGT-SFGWGS----------NSAG 211
Query: 363 QL---GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
QL G V P + +N+ + +SCG HT L
Sbjct: 212 QLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVL 251
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 110/230 (47%), Gaps = 14/230 (6%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G L E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIP-IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L L + +V P + L + + G E + ++ GKV ++G SG+LG+
Sbjct: 213 LALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSP 272
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G P+L++ ++G+ +I G A + G+V FG
Sbjct: 273 TPEKRG---------PQLVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFG 313
>gi|449280356|gb|EMC87683.1| RCC1 and BTB domain-containing protein 1 [Columba livia]
Length = 531
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 135/300 (45%), Gaps = 47/300 (15%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A + +L+ G G H + TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTIVPKKLEALCGKKISSLSYGSGPHVVLCTEDGEVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+VV+++ G HHS A++ DG+LY WG N+ GQ+G G A + P P
Sbjct: 114 QGITPVQVCTNLLIKKVVEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
+V CL G A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RRVSNCLQGKMVVGIACGQTSSMAVVSNGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
TP + L GV + A G+ H+ +L G
Sbjct: 223 TPCRVAALHGVCILQIACGYAHTL------------------------------ALTDEG 252
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTWG 345
LY WG+N G LG G+ SP ++ E V+ +C HT+A G++ WG
Sbjct: 253 LLYAWGANTYGQLGTGNKSNQLSPVQIMME-KERVVEIAACHSAHTSAAKTQSGQVYMWG 311
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 121/225 (53%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L+ G +YA G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGITPVQVCTNLLIKKVVEVACGSHHSMALSFDGDLYAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P R+S K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRRVSNCLQGKMVVGIACGQTSSMAVVSNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +V L G+ Q A G+ ++A+T G + +WGA G+LG G +S+ L
Sbjct: 218 NGNQL--TPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+ +++ E E V V+IAA H SA ++G+VY++G
Sbjct: 276 PV--------QIMMEKERV-VEIAACHSAHTSAAKTQSGQVYMWG 311
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 126/293 (43%), Gaps = 59/293 (20%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P ++ ++K V T + + IT + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEVASIRKACV-FGTSANEAIYITHNDEVFVFGLNCSNCLGTGDNQSTI--VPKKLE 69
Query: 173 CLSGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
L G K ++L + V T G+V +WG G +LG+G + + ++ T
Sbjct: 70 ALCG--KKISSLSYGSGPHVVLCTEDGEVYAWGHNGYSQLGNGTTNQGITPVQVC---TN 124
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
LIK KV A G HS +L G+L
Sbjct: 125 LLIK-----KVVEVACGSHHSM------------------------------ALSFDGDL 149
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWGWGG 348
Y WG N G +G GS +P RV V ++CG + A +S G++ WG+ G
Sbjct: 150 YAWGYNNCGQVGSGSTANQPTPRRVSNCLQGKMVVGIACGQTSSMAVVSNGEVYGWGYNG 209
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ GQLG GN+ + + P V V LQ++CG+ HT AL +
Sbjct: 210 N------------GQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTD 250
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 75/138 (54%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P +A + +ACG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P++I K+ VV+I+ + H S+A T G++YMWG+ GQ
Sbjct: 265 LG-TGNKSNQLSPVQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFACTDDVF 333
>gi|218191372|gb|EEC73799.1| hypothetical protein OsI_08500 [Oryza sativa Indica Group]
Length = 988
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 176/363 (48%), Gaps = 60/363 (16%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
++++ACG H +T+ G V++ G+++ G+LG ++ S +P I L V+ I+ G
Sbjct: 217 VQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVS-DPKIIESLASTRVKAIAFG 275
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGL-GKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
H+ A+++ GELY WG+ ++ LGL G + + P K+ L GI + A G +
Sbjct: 276 AKHTCAVSISGELYEWGEGTHC-LGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHT 334
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
++ G++ ++G G G LGHG ++ P+ ++ L+GV+ K A G H
Sbjct: 335 AIISSAGQIFTYGDGTFGVLGHGDTLTVA---------RPKQVESLKGVRAKAIACGPWH 385
Query: 250 SACIDE----------NGRVYIFGD--------------------RAVDKMLFQEGNHAR 279
+A I E +G+++ +GD ++ F + + A+
Sbjct: 386 TAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAK 445
Query: 280 RPSLI--SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
+++ G ++T GS E+G LG + S ++GP V ++S G H A ++
Sbjct: 446 AQTIVLTITGVVFTIGSKEHGRLG-NPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLT 504
Query: 338 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
GK+ TWG G + GQLG G+ VD +PT+V E+ + ++CGFN T
Sbjct: 505 MNGKVFTWGKG------------TEGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFT 552
Query: 397 GAL 399
A+
Sbjct: 553 MAI 555
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 121/290 (41%), Gaps = 58/290 (20%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+ L K+ + S G H + T ++++WG+ L G + + +P + I
Sbjct: 158 ITQLPKQ--KSSEGLHVAYGATSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHII 215
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+ A G + + VT G+V SWG GRLGH S S P++I+ L
Sbjct: 216 DVQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKV---------SVSVSDPKIIESLAS 266
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNEN 297
+VK A G H+ + GELY WG +
Sbjct: 267 TRVKAIAFGAKHTCAVS------------------------------ISGELYEWGEGTH 296
Query: 298 GCLGIGSIDVLHS---PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTF 353
CLG+ S P ++ GP + +++CG HTA IS G+I T+G GTF
Sbjct: 297 -CLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQIFTYG----DGTF 351
Query: 354 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
G LGHG+ + P V + V+A ++CG HT A++E +
Sbjct: 352 --------GVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERM 393
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ D G+LG + + P ++C A T+ LT TG V+ G + G+
Sbjct: 408 WGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGR 467
Query: 103 LG--ISENIGYSLEPLRISG-LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
LG +SE+ L I G LK E V +IS+G H + +T++G+++ WGK + GQLGLG
Sbjct: 468 LGNPLSEDTSICL----IEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLG 523
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ PT VE L A GF ++A+
Sbjct: 524 DYVDR--SYPTLVEALEDKQVHSIACGFNFTMAI 555
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 29/219 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE----------TGCV 92
+G+G +G LG G + RP + + KA+ACG HT + E +G +
Sbjct: 346 YGDGTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKL 405
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNS 151
+ G D G+LG ++ L P + L + Q+S + +T+ G ++ G
Sbjct: 406 FTWGDADRGKLGHADK-KMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKE 464
Query: 152 NGQLGLGKKAAKVIPI---PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
+G+LG I + P K E F ++ + G +T GKV +WG G G+
Sbjct: 465 HGRLGNPLSEDTSICLIEGPLKTE-----FVREISSGSSHIAVLTMNGKVFTWGKGTEGQ 519
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
LG G P L++ LE +V A GF
Sbjct: 520 LGLGD---------YVDRSYPTLVEALEDKQVHSIACGF 549
>gi|291539013|emb|CBL12124.1| Fibronectin type III domain./Regulator of chromosome condensation
(RCC1) repeat [Roseburia intestinalis XB6B4]
Length = 1546
Score = 110 bits (275), Expect = 1e-21, Method: Composition-based stats.
Identities = 95/354 (26%), Positives = 160/354 (45%), Gaps = 63/354 (17%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG D+G++G G+ ++R++P + H + +++ G ++ +T+ G +Y G N +G
Sbjct: 762 MWGVNDFGQIGDGTTKNRYKP---TKILDHVV-SVSLGDYYSGAITQDGSLYMWGSNVYG 817
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
Q+G G + + + + + V+ +S GY HS AIT DG LYMWG N +GQ+G G
Sbjct: 818 QIGD----GTTEDRYKPTKILDHVIAVSLGYCHSGAITQDGSLYMWGSNDSGQIGDGTTE 873
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ PTK+ L + +LG S A+T G + WG+ G +G G
Sbjct: 874 DRY--KPTKI--LDHVIA--VSLGVSHSGAITQDGSLYMWGSNSRGGIGDG--------- 918
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD----------------- 264
T+E + K L+ V G +S I ++G +Y++G
Sbjct: 919 --TTEVRYKPTKILDHVIAVSLQTG--NSGAITQDGSLYMWGSNVYGEIGDGTEEDRYKP 974
Query: 265 -RAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
+ +D ++ ++ G LY WG N G +G G+ + + P ++ V
Sbjct: 975 TKILDHVIAVSLGDDHSGAITQDGSLYMWGRNYYGEIGDGTEEDRYKPTKIL-----DHV 1029
Query: 324 DQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 376
VS G H+ AI++ G + WGW +S GQ+G G PT
Sbjct: 1030 IAVSLGVGHSGAITQDGSLYMWGW------------NSDGQIGDGTTKARYTPT 1071
Score = 108 bits (271), Expect = 3e-21, Method: Composition-based stats.
Identities = 98/351 (27%), Positives = 156/351 (44%), Gaps = 71/351 (20%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH 133
+ L+ G H+ + + G +Y G+NDFGQ+G G + + + + VV +S G +
Sbjct: 742 QVLSLGDYHSGVIAQDGSLYMWGVNDFGQIG----DGTTKNRYKPTKILDHVVSVSLGDY 797
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+S AIT DG LYMWG N GQ+G G + PTK+ L + +LG+ S A+T
Sbjct: 798 YSGAITQDGSLYMWGSNVYGQIGDGTTEDRY--KPTKI--LDHVIA--VSLGYCHSGAIT 851
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G + WG+ SG++G G + Y P I + V + G HS I
Sbjct: 852 QDGSLYMWGSNDSGQIGDGT---------TEDRYKPTKILD----HVIAVSLGVSHSGAI 898
Query: 254 DENGRVYIFGDRA---------------------VDKMLFQEGNHARRPSLISGGELYTW 292
++G +Y++G + V + Q GN ++ G LY W
Sbjct: 899 TQDGSLYMWGSNSRGGIGDGTTEVRYKPTKILDHVIAVSLQTGNSG---AITQDGSLYMW 955
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 351
GSN G +G G+ + + P ++ V VS G H+ AI++ G + W
Sbjct: 956 GSNVYGEIGDGTEEDRYKPTKIL-----DHVIAVSLGDDHSGAITQDGSLYMW------- 1003
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPT-IVNFGENVKALQVSCGFNHTGALLE 401
G + G++G G + D PT I++ + VS G H+GA+ +
Sbjct: 1004 -----GRNYYGEIGDGTEEDRYKPTKILD-----HVIAVSLGVGHSGAITQ 1044
Score = 104 bits (260), Expect = 8e-20, Method: Composition-based stats.
Identities = 82/294 (27%), Positives = 133/294 (45%), Gaps = 45/294 (15%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ YG++G G+ E R++P + H + A++ G H+ +T+ G +Y G ND G
Sbjct: 810 MWGSNVYGQIGDGTTEDRYKP---TKILDHVI-AVSLGYCHSGAITQDGSLYMWGSNDSG 865
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
Q+G G + + + + + V+ +S G HS AIT DG LYMWG NS G G+G
Sbjct: 866 QIGD----GTTEDRYKPTKILDHVIAVSLGVSHSGAITQDGSLYMWGSNSRG--GIGDGT 919
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+V PTK+ L + G S A+T G + WG+ G +G G E
Sbjct: 920 TEVRYKPTKI--LDHVIAVSLQTG--NSGAITQDGSLYMWGSNVYGEIGDGTEED----- 970
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------------------ 263
Y P I + V + G HS I ++G +Y++G
Sbjct: 971 ----RYKPTKILD----HVIAVSLGDDHSGAITQDGSLYMWGRNYYGEIGDGTEEDRYKP 1022
Query: 264 DRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
+ +D ++ ++ G LY WG N +G +G G+ ++P ++ P
Sbjct: 1023 TKILDHVIAVSLGVGHSGAITQDGSLYMWGWNSDGQIGDGTTKARYTPTQITIP 1076
Score = 49.3 bits (116), Expect = 0.004, Method: Composition-based stats.
Identities = 58/280 (20%), Positives = 109/280 (38%), Gaps = 79/280 (28%)
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+++ +LG S + G + WG G++G G + + Y P I +
Sbjct: 740 YSQVLSLGDYHSGVIAQDGSLYMWGVNDFGQIGDGT---------TKNRYKPTKILD--- 787
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGD------------------RAVDKMLFQEGNHAR 279
V + G +S I ++G +Y++G + +D ++ +
Sbjct: 788 -HVVSVSLGDYYSGAITQDGSLYMWGSNVYGQIGDGTTEDRYKPTKILDHVIAVSLGYCH 846
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE- 338
++ G LY WGSN++G +G G+ + + P ++ V VS G H+ AI++
Sbjct: 847 SGAITQDGSLYMWGSNDSGQIGDGTTEDRYKPTKIL-----DHVIAVSLGVSHSGAITQD 901
Query: 339 GKILTWGWG------------------------------GSHGTFSED------GHSSGG 362
G + WG G+ G ++D G + G
Sbjct: 902 GSLYMWGSNSRGGIGDGTTEVRYKPTKILDHVIAVSLQTGNSGAITQDGSLYMWGSNVYG 961
Query: 363 QLGHGNDVDYIHPT-IVNFGENVKALQVSCGFNHTGALLE 401
++G G + D PT I++ + VS G +H+GA+ +
Sbjct: 962 EIGDGTEEDRYKPTKILD-----HVIAVSLGDDHSGAITQ 996
>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
carolinensis]
Length = 1081
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 150/339 (44%), Gaps = 67/339 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVV----CSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
WG G G+LGLG E PV A ++ +ACG HTL L + G V + G N
Sbjct: 5 WGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLLRDDGGVASCGDN 64
Query: 99 DFGQLGISENIGY---SLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
GQLG G S P I L+ ++VV +S G HS A+ G +Y WG + GQ
Sbjct: 65 SRGQLGRRLPSGQEKRSYGPELIQALETQKVVHVSCGKEHSLAVCNKGRVYSWGAGTFGQ 124
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G+ ++ IP + LS Q A G + S+A+T G++ SWG G+LG G++
Sbjct: 125 LGTGELGDRL--IPKTINALSKYKVIQVACGHDHSIALTNDGRIFSWGQNIHGQLGLGKD 182
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S S+ +P+ + L+G+ + AAG HS + +G V
Sbjct: 183 IS--------SQASPQQVSALDGIPLAQVAAGGAHSFALSLSGVV--------------- 219
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP-----VDQVSCG 329
Y WG N LG+ E++ P+S + V VSCG
Sbjct: 220 ---------------YGWGRNNAHQLGLSQAK---PKEQIFKPYSIAALRSLDVAFVSCG 261
Query: 330 WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
+HTA +++ GS TF +D S GQLG +
Sbjct: 262 AEHTAVLTQ--------NGSVYTFGDD---SAGQLGRNS 289
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 116/224 (51%), Gaps = 12/224 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG G L R P +A K+ + +ACG H++ LT G +++ G N GQ
Sbjct: 117 WGAGTFGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSIALTNDGRIFSWGQNIHGQ 176
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK-K 160
LG+ ++I P ++S L + Q++ G HS A+++ G +Y WG+N+ QLGL + K
Sbjct: 177 LGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGRNNAHQLGLSQAK 236
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ I P + L + + G E + +T G V ++G +G+LG SS
Sbjct: 237 PKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTFGDDSAGQLGRNSSSS---- 292
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC-IDENGRVYIFG 263
++ P+ ++ ++G V + A G H+ I +G++ FG
Sbjct: 293 ----PKFGPQKVEWIDG-PVSLLACGSYHTLVRISTSGQLLSFG 331
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 5/170 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG + S+ P SA + L +A GGAH+ L+ +G VY G N+
Sbjct: 169 WGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGRNNAH 228
Query: 102 QLGISENIGYS--LEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG+S+ +P I+ L+ +V +S G H++ +T +G +Y +G +S GQLG
Sbjct: 229 QLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTFGDDSAGQLGRN 288
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
++ P KVE + G + A + V ++ G++LS+G G R
Sbjct: 289 SSSSPKFG-PQKVEWIDGPVSLLACGSYHTLVRISTSGQLLSFGRGPLQR 337
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 115/284 (40%), Gaps = 41/284 (14%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTK--VECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
LY WG+ S GQLGLGK P+P + + A G ++ + G V S
Sbjct: 2 LYCWGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLLRDDGGVASC 61
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G+LG S + Y P LI+ LE KV + G HS + GRVY
Sbjct: 62 GDNSRGQLGRRLPSG-----QEKRSYGPELIQALETQKVVHVSCGKEHSLAVCNKGRVYS 116
Query: 262 -------------FGDRAVDKMLFQEGN---------HARRPSLISGGELYTWGSNENGC 299
GDR + K + H +L + G +++WG N +G
Sbjct: 117 WGAGTFGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSIALTNDGRIFSWGQNIHGQ 176
Query: 300 LGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGH 358
LG+G I SP++V P+ QV+ G H+ A+S ++ +GWG + H
Sbjct: 177 LGLGKDISSQASPQQVSA-LDGIPLAQVAAGGAHSFALSLSGVV-YGWG------RNNAH 228
Query: 359 SSGGQLGHGNDVDYI-HPTIVNFGENVKALQVSCGFNHTGALLE 401
G L + I P + ++ VSCG HT L +
Sbjct: 229 QLG--LSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQ 270
>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
Length = 527
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 115/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 99 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++G K VV I+ G S A+ GE+Y+WG N NGQLGLG
Sbjct: 159 QVGSGSTANQPI-PRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 218 SGNQ--PTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 269
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y ++ E + + ++IAA H SA + G VY++G
Sbjct: 270 --KSNQSYPTPVVVEKDRI-IEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 113/219 (51%), Gaps = 16/219 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGLGDVQSTIEPRRLDCLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 111 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 168
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 169 PIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 219
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++ TP + L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 220 NQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 142/344 (41%), Gaps = 65/344 (18%)
Query: 64 VCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
+CS E ++ AC G L+ T ++ G N G LG+ + + ++EP R+
Sbjct: 12 LCSEAELQLIRQ-ACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIEPRRLD 69
Query: 120 GLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
L K++ +S G H T +GE++ WG N+ QLG G ++P LS
Sbjct: 70 CLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN-LSNK 128
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-- 235
+ A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 129 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRVTGCLQ 179
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSN 295
V V IA A +D GE+Y WG N
Sbjct: 180 NKVVVNIACGQMCSMAVVDT-------------------------------GEVYVWGYN 208
Query: 296 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 354
NG LG+GS +P RV V +V+CG+ HT ++ EG++ WG
Sbjct: 209 GNGQLGLGSSGNQPTPCRVSA-LQGIRVQRVACGYAHTLVLTDEGQVYAWG--------- 258
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 259 ---ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 299
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 113/267 (42%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++CLSG K A L + V T
Sbjct: 38 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDCLSG--KKIACLSYGSGPHVVLATTE 93
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 94 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSL---- 141
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 142 --------------------------VLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 175
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG + A+ + G++ WG+ G+ GQLG G+ +
Sbjct: 176 GCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGN------------GQLGLGSSGNQPT 223
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V+ + ++ +V+CG+ HT L +
Sbjct: 224 PCRVSALQGIRVQRVACGYAHTLVLTD 250
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P SA + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 264 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 --SVILPHLTHFSCTDDVF 333
>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
Full=HECT domain and RCC1-like domain-containing protein
2
gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
Length = 4912
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 178/387 (45%), Gaps = 57/387 (14%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 4054 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4111
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ + +++ P + L+ V+ +++G H A+T +GE+Y WG+ +G+LG
Sbjct: 4112 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4170
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 4171 GNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4224
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4225 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4279
Query: 276 NHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + P +L G +YTWG + LG GS+D + P++
Sbjct: 4280 DGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKK 4339
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V + ++ G H A S+ G++ TW G + GQLG G
Sbjct: 4340 VAA-LQGKKIISIATGSLHCVACSDSGEVYTW------------GDNDEGQLGDGTVTAI 4386
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGAL 399
P +V + ++V+CG HT AL
Sbjct: 4387 QRPRLVAALQGKHIVKVTCGSAHTLAL 4413
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 137/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 3097 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3156
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L + VVQ++ G + A+T DG ++ WG G+LG G
Sbjct: 3157 LGHGDNT-TQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3215
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3216 SEGS--DTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3271
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ I L G +V A G LH + + G+V
Sbjct: 3272 -------RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV-------------------- 3304
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
Y WG N++G G G+ V P V G V++V+CG H+ A
Sbjct: 3305 ----------YAWGDNDHGQQGSGNTFVNKKPALVIG-LDAVFVNRVACGSSHSIA 3349
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 134/303 (44%), Gaps = 48/303 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + S+ +ACG AH+ +T +G V G +G+
Sbjct: 4160 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4219
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4220 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4277
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4278 -GSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4334
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P+ + L+G K+ A G LH AC D
Sbjct: 4335 -------RRPKKVAALQGKKIISIATGSLHCVACSD------------------------ 4363
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
GE+YTWG N+ G LG G++ + P R+ + +V+CG HT A+S
Sbjct: 4364 -------SGEVYTWGDNDEGQLGDGTVTAIQRP-RLVAALQGKHIVKVTCGSAHTLALST 4415
Query: 339 GKI 341
++
Sbjct: 4416 SQL 4418
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 161/350 (46%), Gaps = 56/350 (16%)
Query: 79 GGAHTLFL-TETGCVYATGLNDFGQLG--ISENIG--YSLEPLRISGLKKEVVQISTGYH 133
GG+ +LF+ ++ G VYA G G+LG ++ N+ + L LR +KK V + +G
Sbjct: 3026 GGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKK--VAVHSGGK 3083
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H+ A+T+DG+++ WG+ +G+LG G + + P VE L + A G S A++
Sbjct: 3084 HALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVEALRAKKIRDVACGSSHSAAIS 3141
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSA 251
G++ +WG G GRLGHG +T++ P+L+ L G +V A G +
Sbjct: 3142 SQGELYTWGLGEYGRLGHGD---------NTTQLKPKLVTALAGRRVVQVACGSRDAQTL 3192
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRP----------------------SLISGGEL 289
+ E+G V+ +GD K+ + P +L GE+
Sbjct: 3193 ALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEV 3252
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGG 348
+TWG + LG G + P+ + G V V+ G H A+++ G++ WG
Sbjct: 3253 WTWGKGDYYRLGHGGDQHVRKPQPIGG-LRGRRVIHVAVGALHCLAVTDAGQVYAWG--- 3308
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G GN P +V + V +V+CG +H+ A
Sbjct: 3309 ------DNDH---GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3349
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDF 100
WG G Y RLG G+ + R P + A H + AL G AH+L LT G V+A G D+
Sbjct: 692 WGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDY 751
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + N SL+P+ + L + V ++ G S A++ +G+LY WGK + L ++
Sbjct: 752 GKLG-NGNCNGSLQPILVESLPR-VQRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVER 809
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ + +P V L A+ +A++ G+V WG S ++ SS
Sbjct: 810 SVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPASVSS 865
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 15/224 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ RLG G +R P +A E+H ++++ CG +++ +T G + G + +
Sbjct: 640 WGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYAR 699
Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + SL L ++ VV ++ +G HS A+T +G ++ WG G+LG G
Sbjct: 700 LGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNC 759
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILG 219
+ PI VE L + ++ G + SVA++ G++ +WG LGH E S+ G
Sbjct: 760 NGSLQPI--LVESLPRV--QRVFAGSQFSVALSSEGQLYTWGKATC--LGHQLVERSVQG 813
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
PRL+ L+ ++ A H + +G V+ +G
Sbjct: 814 C------SVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWG 851
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 117/269 (43%), Gaps = 56/269 (20%)
Query: 128 ISTGYHHSSAIT---VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ST + ++A + + +WG N QLG G K +KV +PT + +S + A
Sbjct: 2969 VSTSHEEAAAAPEQDLPCTVMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIAG 3026
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G + V+ GKV + G G +GRLG G ++ P + L VK A
Sbjct: 3027 GSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNV---------PLPHQLPVLRQYVVKKVA 3077
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGS 304
+HS G HA +L G++++WG E+G LG G+
Sbjct: 3078 ---VHSG-----------------------GKHAL--ALTLDGKVFSWGEGEDGKLGHGN 3109
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQ 363
L P V+ + V+CG H+AAIS +G++ TWG G G+
Sbjct: 3110 RTTLDKPRLVEA-LRAKKIRDVACGSSHSAAISSQGELYTWGLG------------EYGR 3156
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCG 392
LGHG++ + P +V + +QV+CG
Sbjct: 3157 LGHGDNTTQLKPKLVTALAGRRVVQVACG 3185
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 127/324 (39%), Gaps = 58/324 (17%)
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
ES P + F+ +K +AC L L++ G +Y L EPL
Sbjct: 561 ESAGVPTLSCRFQ---IKQVACCETQMLILSQEGKLYTWRLAK-----------PEAEPL 606
Query: 117 RISGLKKEVVQISTGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
+ + +V IS H H AI + Y WG + +LG G A+ +PTK+
Sbjct: 607 PMEEVAHDVF-ISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARA--VPTKIA 663
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
L + G S A+T GG +L+WG G RLGHG S P L+
Sbjct: 664 ALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGN---------SDDRSLPTLV 714
Query: 233 KEL-EGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI------ 284
L + + V +A +G HS + G V+ +GD K+ N + +P L+
Sbjct: 715 VALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRV 774
Query: 285 --------------SGGELYTWGSNENGCLGIGSIDVL---HSPERVQGPFSESPVDQVS 327
S G+LYTWG + CLG ++ S R+ + V+
Sbjct: 775 QRVFAGSQFSVALSSEGQLYTWG--KATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVA 832
Query: 328 CGWKHTAAI-SEGKILTWGWGGSH 350
H A+ S G++ WG S
Sbjct: 833 VSVAHCLALSSSGEVFGWGRNDSQ 856
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 124/335 (37%), Gaps = 105/335 (31%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG------------------ 185
+Y WG N GQLG G + ++ I PT E LS + Q A G
Sbjct: 4051 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4108
Query: 186 --------------------------FEQSVAVTGGGK----------VLSWGAGGSGRL 209
F + VAV GGK V +WG G G+L
Sbjct: 4109 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 4168
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S P+L++ L G+ V A G HSA I +G V +G +
Sbjct: 4169 GHGNRMSY---------DRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4219
Query: 270 MLFQEGNHARRPSLISG------------------------GELYTWGSNENGCLGIGSI 305
+ + RP L+ +++WG + G LG G
Sbjct: 4220 LGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4279
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 364
D P +++ + V +V CG + + A+++ G + TWG G H +L
Sbjct: 4280 DGCKLPYKIES-LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFH------------RL 4326
Query: 365 GHGNDVDYI-HPTIVNFGENVKALQVSCGFNHTGA 398
GHG+ VD++ P V + K + ++ G H A
Sbjct: 4327 GHGS-VDHVRRPKKVAALQGKKIISIATGSLHCVA 4360
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 56/118 (47%), Gaps = 20/118 (16%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQ---VSCGWKHTAAIS-EGKI 341
G++Y G NG LG+G V H+ P Q P V + V G KH A++ +GK+
Sbjct: 3038 GKVYACGEGTNGRLGLG---VTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKV 3094
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+WG G EDG +LGHGN P +V K V+CG +H+ A+
Sbjct: 3095 FSWGEG-------EDG-----KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAI 3140
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
Y+WG+ E+ LG G P ++ + V V CG ++AAI+ G +LTWG
Sbjct: 638 YSWGTGEDHRLGHGDTHARAVPTKIAA-LEQHCVQSVYCGCSYSAAITCGGNLLTWG--- 693
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
GT++ +LGHGN D PT+V
Sbjct: 694 -RGTYA--------RLGHGNSDDRSLPTLV 714
>gi|443293653|ref|ZP_21032747.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
str. Lupac 08]
gi|385883511|emb|CCH20898.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
str. Lupac 08]
Length = 710
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 170/379 (44%), Gaps = 43/379 (11%)
Query: 43 WGNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG YG LG+G+ L+ + PV ++ +A G H+L LT TG V A G N +
Sbjct: 68 WGRDGYGALGVGTATLDDKLSPVRVHLPTGTTISDVAAGAVHSLALTSTGTVLAWGTNYY 127
Query: 101 GQLG-------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G LG ++N Y + + V ++ +S A+T G + WG N G
Sbjct: 128 GVLGNGTKTDNSAQNDSYVPAAVHLPA-GTTVTSVAASSTYSLALTATGTVLAWGNNDQG 186
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLG G +P+P + + I AA +A+T G VL+WG+ GSG+LG+G
Sbjct: 187 QLGNGTNTDSYLPVPLALPAATTITAIAAA--TNHGLALTSNGTVLAWGSNGSGQLGNGN 244
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV--DKML 271
+T+ TP + G + AA HS + G V +G V ++
Sbjct: 245 ---------TTNSNTPVTVALPAGTTITAIAAAGSHSMALTSTGTVLTWGQDTVLPIPIV 295
Query: 272 FQEG----------NHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
F G +H+ +L S G+++TWG+N G LG G+ P P +++
Sbjct: 296 FPAGITITAVASGNDHSL--ALTSTGKVFTWGANYFGSLGNGTFANSSVPVPASVP-TDT 352
Query: 322 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
+ ++ G + A+ S GK+L WG ++G +G +G G G V P V+
Sbjct: 353 TITAIAGGNAQSLALTSTGKLLAWGR-NNYGQVG-NGTRTGSWPGMGVSV----PVPVSL 406
Query: 381 GENVKALQVSCGFNHTGAL 399
+ K ++ G+ H+ A+
Sbjct: 407 AADTKITTMAGGYYHSLAV 425
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G LG G+ + PV S ++ A+A G A +L LT TG + A G N++GQ
Sbjct: 324 WGANYFGSLGNGTFANSSVPVPASVPTDTTITAIAGGNAQSLALTSTGKLLAWGRNNYGQ 383
Query: 103 LGISEN------IGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVD 141
+G +G S+ P+ +S ++ ++ GY+HS A+ +
Sbjct: 384 VGNGTRTGSWPGMGVSV-PVPVSLAADTKITTMAGGYYHSLAVAAE 428
>gi|432106315|gb|ELK32196.1| RCC1 and BTB domain-containing protein 1 [Myotis davidii]
Length = 531
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 141/301 (46%), Gaps = 49/301 (16%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLTPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + ++
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDTGEVYGWGYNGNGQLGLG---------NNVNQ 221
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
TP V++AA LHS C+++ + G +A +L
Sbjct: 222 LTP----------VRVAA---LHSVCVNQ----IVCG-------------YAHTLALTDE 251
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTW 344
G LY WG+N G LG G+ + L SP + E V+ +C HT+A G + W
Sbjct: 252 GLLYAWGANTYGQLGTGNKNNLLSPTHIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMW 310
Query: 345 G 345
G
Sbjct: 311 G 311
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 115/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDTGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NVNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PTHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 136/320 (42%), Gaps = 60/320 (18%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVD 141
L++TE V+ GLN LG +N +L P ++ L K++ +S G H T D
Sbjct: 35 LYVTEDDEVFVFGLNYSNCLGTGDNQS-TLTPKKLEALCGKKIKSLSYGSGPHVLLSTED 93
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVAVTGGGKV 198
G +Y WG N QLG G + PI + + + KQ A G SVA+ G+V
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPI----QVCTNLLIKQVVEVACGSHHSVALAADGEV 149
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
+WG G++G G + ++ TPR + +K
Sbjct: 150 FAWGYNNCGQVGSGS---------TANQPTPRKVTNCLHIK------------------- 181
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
R V Q + A ++ GE+Y WG N NG LG+G+ +P RV
Sbjct: 182 ------RVVGIACGQTSSMA----VLDTGEVYGWGYNGNGQLGLGNNVNQLTPVRVAALH 231
Query: 319 SESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
S V+Q+ CG+ HT A+++ +L + WG + + GQLG GN + + PT +
Sbjct: 232 SVC-VNQIVCGYAHTLALTDEGLL-YAWGAN----------TYGQLGTGNKNNLLSPTHI 279
Query: 379 NFGENVKALQVSCGFNHTGA 398
+ +C HT A
Sbjct: 280 MVEKERVVEIAACHSAHTSA 299
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 125/291 (42%), Gaps = 55/291 (18%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T D E++++G N + LG G + + P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSANEALYVTEDDEVFVFGLNYSNCLGTGDNQSTLTP--KKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYT 291
IK++ V A G HS +L + GE++
Sbjct: 127 IKQVVEV-----ACGSHHSV------------------------------ALAADGEVFA 151
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 350
WG N G +G GS +P +V V ++CG + A+ + G++ WG+ G+
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDTGEVYGWGYNGN- 210
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GQLG GN+V+ + P V +V Q+ CG+ HT AL +
Sbjct: 211 -----------GQLGLGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 250
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPTHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ V+P T + C +F
Sbjct: 317 -SVVLPHLTHLSCTDDVF 333
>gi|444731984|gb|ELW72311.1| RCC1 and BTB domain-containing protein 1 [Tupaia chinensis]
Length = 531
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 140/301 (46%), Gaps = 49/301 (16%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
TP V++AA LHS C+++ + G +A +L
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ----IVCG-------------YAHTLALTDE 251
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTW 344
G LY WG+N G LG G+ + L SP + E V+ +C HT+A G + W
Sbjct: 252 GLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMW 310
Query: 345 G 345
G
Sbjct: 311 G 311
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 137/312 (43%), Gaps = 51/312 (16%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P ++ ++K V T + + +T E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEVASIRKACV-FGTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V A G HS + +G V+ +G ++ G+ A +P+
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV S V+Q+
Sbjct: 180 IKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG ++ GQLG GN + + P + +
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHIMVEKERVV 287
Query: 387 LQVSCGFNHTGA 398
+C HT A
Sbjct: 288 EIAACHSAHTSA 299
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
Length = 4996
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 144/317 (45%), Gaps = 56/317 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 3138 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3197
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P +++ L + V+Q++ G + A+T DG ++ WG G+LG G
Sbjct: 3198 LGHGDN-ATQLKPKQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3256
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3257 SEGSA--TPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3312
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ I L G +V A G LH + + G+V
Sbjct: 3313 -------RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV-------------------- 3345
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
Y WG N++G G G+ V P V G V++V+CG H+ A
Sbjct: 3346 ----------YAWGDNDHGQQGSGNTFVNKKPALVIG-LDAVFVNRVACGSSHSIA---- 3390
Query: 340 KILTWGWGGSHGTFSED 356
WG + + E+
Sbjct: 3391 ------WGLPNASLDEE 3401
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 178/387 (45%), Gaps = 57/387 (14%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 4151 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4208
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ + +++ P + L+ V+ +++G H A+T +GE+Y WG+ +G+LG
Sbjct: 4209 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4267
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 4268 GNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITSSGHVLTWGKGRYGRLGHGD---- 4321
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4322 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4376
Query: 276 NHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + P +L G +YTWG + LG GS+D + P++
Sbjct: 4377 DGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKK 4436
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V + ++ G H A S+ G++ TW G + GQLG G
Sbjct: 4437 VAA-LQGKKIISIATGSLHCVACSDAGEVYTW------------GDNDEGQLGDGTVTAI 4483
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGAL 399
P +V + ++V+CG HT AL
Sbjct: 4484 QRPRLVAALQGKHIVKVTCGSAHTLAL 4510
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 134/303 (44%), Gaps = 48/303 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + S+ +ACG AH+ +T +G V G +G+
Sbjct: 4257 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITSSGHVLTWGKGRYGR 4316
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4317 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4374
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4375 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4431
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P+ + L+G K+ A G LH AC D
Sbjct: 4432 -------RRPKKVAALQGKKIISIATGSLHCVACSD------------------------ 4460
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
GE+YTWG N+ G LG G++ + P R+ + +V+CG HT A+S
Sbjct: 4461 -------AGEVYTWGDNDEGQLGDGTVTAIQRP-RLVAALQGKHIVKVTCGSAHTLALST 4512
Query: 339 GKI 341
++
Sbjct: 4513 SQL 4515
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 154/361 (42%), Gaps = 61/361 (16%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT G V++ G + G
Sbjct: 3085 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3144
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG +P + L+ K++ ++ G HS+AI+ GELY WG G+LG G
Sbjct: 3145 KLGHGNRTTLD-KPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3203
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A ++ P +V L+G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3204 ATQLKP--KQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG----- 3256
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S TP I+ L G+ V G S
Sbjct: 3257 ----SEGSATPHEIERLSGIGVIQIECGAQFSL--------------------------- 3285
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
+L GE++TWG + LG G + P+ + G V V+ G H A+++
Sbjct: 3286 ---ALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGG-LRGRRVIHVAVGALHCLAVTD 3341
Query: 339 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
G++ WG ++ H GQ G GN P +V + V +V+CG +H+
Sbjct: 3342 AGQVYAWG---------DNDH---GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSI 3389
Query: 398 A 398
A
Sbjct: 3390 A 3390
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 153/353 (43%), Gaps = 74/353 (20%)
Query: 88 ETGC-VYATGLNDFGQLG-----------ISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
E C V GLND QLG S+ I L P+ ISG K + +S
Sbjct: 3024 ELPCTVMVWGLNDKEQLGGLKGSKVKVPTFSQTIS-RLRPIHISGGSKSLFIVSQ----- 3077
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVT 193
DG+++ G+ +NG+LGLG +P+P ++ L K+ A+ G + ++A+T
Sbjct: 3078 -----DGKVFACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT 3130
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
GKV SWG G G+LGHG +++ PRL++ L K++ A G HSA I
Sbjct: 3131 LDGKVFSWGEGEDGKLGHGNRTTL---------DKPRLVEALRAKKIRDVACGSSHSAAI 3181
Query: 254 DENGRVYIF----------GDRAVD-----------KMLFQEG---NHARRPSLISGGEL 289
G +Y + GD A + + Q A+ +L G +
Sbjct: 3182 SSQGELYTWGLGEYGRLGHGDNATQLKPKQVTALAGRRVIQVACGSRDAQTLALTEDGAV 3241
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGG 348
++WG + G LG G + +P ++ S V Q+ CG + + A++ G++ TWG G
Sbjct: 3242 FSWGDGDFGKLGRGGSEGSATPHEIER-LSGIGVIQIECGAQFSLALTRAGEVWTWGKGD 3300
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG D P + + + V+ G H A+ +
Sbjct: 3301 YY------------RLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTD 3341
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 107/227 (47%), Gaps = 24/227 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG G ++ +P +A + +ACG A TL LTE G V++ G DF
Sbjct: 3190 WGLGEYGRLGHGDNATQLKPKQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDF 3249
Query: 101 GQLGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG SE E R+SG+ V+QI G S A+T GE++ WGK +LG G
Sbjct: 3250 GKLGRGGSEGSATPHEIERLSGIG--VIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG 3307
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
P P + L G A+G +AVT G+V +WG HGQ+ S
Sbjct: 3308 GDQHVRKPQP--IGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN-----DHGQQGSGN 3360
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-------ACIDENGR 258
F+ P L+ L+ V V A G HS A +DE R
Sbjct: 3361 TFVNK----KPALVIGLDAVFVNRVACGSSHSIAWGLPNASLDEEKR 3403
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 87/169 (51%), Gaps = 4/169 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
WG G YGRLG G+ + + P + A ++ + AL G AH+L LT G VYA G D+
Sbjct: 690 WGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDY 749
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + N SL+P+ + L + V +I G S A+T +G LY WGK S ++
Sbjct: 750 GKLG-NGNCNSSLQPILVETLPR-VQRIFAGAQSSMALTTEGHLYSWGKASCLGHQQVER 807
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
+ + +P V L A+G +A+T G+V WG S ++
Sbjct: 808 SVQGCSVPRLVSSLQHKRLVDVAVGVAHCLALTSCGEVFGWGRNDSQQI 856
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 113/229 (49%), Gaps = 16/229 (6%)
Query: 38 RFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
R A WG G+ RLG G +R P SA ++ +KA+ CG +++ +T +G +Y G
Sbjct: 634 RNAYSWGAGEDHRLGHGDTHARAVPTKISALDR-CVKAVFCGCSYSAAITWSGNLYTWGR 692
Query: 98 NDFGQLGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQL 155
+G+LG + + + ++ + E++ ++ +G HS +T +G +Y WG G+L
Sbjct: 693 GTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDYGKL 752
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-E 214
G G + + PI VE L + ++ G + S+A+T G + SWG LGH Q E
Sbjct: 753 GNGNCNSSLQPI--LVETLPRV--QRIFAGAQSSMALTTEGHLYSWGKASC--LGHQQVE 806
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S+ G PRL+ L+ ++ A G H + G V+ +G
Sbjct: 807 RSVQGC------SVPRLVSSLQHKRLVDVAVGVAHCLALTSCGEVFGWG 849
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 105/250 (42%), Gaps = 53/250 (21%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG N GQLG G + ++ I PT E LS + Q A G + AVT GK+ + G
Sbjct: 4148 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4205
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
LG S S P L+ L+ V VK A C+
Sbjct: 4206 ---------GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCL---------- 4246
Query: 264 DRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
+L + GE+Y WG E+G LG G+ P+ V+ + V
Sbjct: 4247 ------------------ALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH-LNGMSV 4287
Query: 324 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 382
++CG H+AAI S G +LTWG G G+LGHG+ D + P +V
Sbjct: 4288 ADIACGSAHSAAITSSGHVLTWGKG------------RYGRLGHGDSEDQLRPKLVEALL 4335
Query: 383 NVKALQVSCG 392
+A+ ++CG
Sbjct: 4336 GYRAIDIACG 4345
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 114/270 (42%), Gaps = 34/270 (12%)
Query: 50 RLGLGSLESRWRPVVCSAFEKHSLKALA--CGGAHTLFLTETGCVYATGLNDFGQLGISE 107
RLG LE P + ++ ++A C G H L + Y+ G + +LG +
Sbjct: 596 RLGKPELE----PQPIEELAQETILSIAGHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGD 651
Query: 108 NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
++ P +IS L + V + G +S+AIT G LY WG+ + G+LG G + +P
Sbjct: 652 THARAV-PTKISALDRCVKAVFCGCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPA 710
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
I G S+ +T G V +WG G G+LG+G +S L + E
Sbjct: 711 IVMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQPI--LVET 768
Query: 228 TPRLIKELEGVKVKIA--AAGFLHSACIDENGRVYIFGDRAVDK--------MLFQEGNH 277
PR+ + G + +A G L+S G+ G + V++ L H
Sbjct: 769 LPRVQRIFAGAQSSMALTTEGHLYSW-----GKASCLGHQQVERSVQGCSVPRLVSSLQH 823
Query: 278 ARRP----------SLISGGELYTWGSNEN 297
R +L S GE++ WG N++
Sbjct: 824 KRLVDVAVGVAHCLALTSCGEVFGWGRNDS 853
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 17/120 (14%)
Query: 274 EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 333
EG H ++ S Y+WG+ E+ LG G P ++ + V V CG ++
Sbjct: 623 EGRHFL--AIDSNRNAYSWGAGEDHRLGHGDTHARAVPTKISA--LDRCVKAVFCGCSYS 678
Query: 334 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
AAI+ G + TWG GT+ G+LGHGN D P IV + + V+ G
Sbjct: 679 AAITWSGNLYTWG----RGTY--------GRLGHGNSDDQCVPAIVMALAEYEIIDVALG 726
>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
Length = 4839
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 137/301 (45%), Gaps = 46/301 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G ++ G +G+
Sbjct: 4068 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGR 4127
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4128 LGHGDSED-QLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4185
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4186 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4242
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4243 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4273
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ +++V+CG HT A S
Sbjct: 4274 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACGSAHTLAWSTS 4324
Query: 340 K 340
K
Sbjct: 4325 K 4325
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 138/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3135 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3192
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3193 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV-- 3249
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + + G+VY
Sbjct: 3250 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVY------------------- 3283
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3284 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3327
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 170/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3962 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4019
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4020 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSFEGEVYSWGEAEDGKLG 4077
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S +T G + +WG G GRLGHG
Sbjct: 4078 HGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD--- 4132
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4133 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4187 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4246
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4247 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4293
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4294 IQRPRLVAALQGKKINRVACGSAHTLA 4320
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 162/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3063 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3120
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3121 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3231
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG G+ + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3232 TWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWG---- 3286
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3287 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 133/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L+ G V++ G D G+LG + + EP IS L K VV I+ G +
Sbjct: 505 GHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE-EPKMISALSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ + G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + + G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ + PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRIT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + SA KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ +S +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V +WG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 152/353 (43%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ +G P + L
Sbjct: 443 PIQCEGLANLGVMQVACAEKRFLILSRNGRVYTQAYN-------SDTLG----PQLVQSL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A++ +GE++ WG G+LG G +P+ P + LSG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGD----TVPLEEPKMISALSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S + P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 595
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV + G GD A+ ++ G++
Sbjct: 596 MLVTGLKGLKVIDVSCGS---------------GD-------------AQTLAVTENGQV 627
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + + +V CG + + A++ +G++ TWG G
Sbjct: 628 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDIVKVRCGSQFSIALTKDGQVYTWGKGD 686
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 687 NQ------------RLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTE 727
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2957 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVA---VHSG---- 3059
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3060 -------------------GRHAM--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3098
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AAI S G++ TWG G G+LGHG++ +
Sbjct: 3099 A-LKTKRIRDIACGSSHSAAITSSGELYTWGLG------------EYGRLGHGDNTTQLK 3145
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3146 PKMVKVLLGHRVIQVACGSRDAQTL 3170
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 89/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E + P++ + + + ++CG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ ++V++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 126/332 (37%), Gaps = 101/332 (30%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4016 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDGK 4075
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSACI G ++ +G
Sbjct: 4076 LGHGNRSPC---------DRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYG 4126
Query: 269 KMLFQEGNHARRPSLISGGE------------------------LYTWGSNENGCLGIGS 304
++ + +P L+ + +++WG + G LG G
Sbjct: 4127 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 363
D P ++ + V +V CG + + A+++ G + TWG G H +
Sbjct: 4187 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4233
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
LGHG+D P V + K + ++ G H
Sbjct: 4234 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4265
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
L G E++ Y P + GLK K+V+ ++ G H A+T D E++ WG N Q L
Sbjct: 690 LGHGTEEHVRY---PKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746
Query: 156 GLGKKAAKVIP 166
+ K +P
Sbjct: 747 RITKPEPAALP 757
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 91/215 (42%), Gaps = 29/215 (13%)
Query: 194 GGGKVLSWGAGGSGRLG--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
G G + WG G+LG G + + + + P + E + A G L++
Sbjct: 3955 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014
Query: 252 CIDENGRVYIFGDRAVD-KMLFQEGNHA--RRPSLISG----------GELYTWGSNENG 298
GR+ I G +V L + H ++ ++ SG GE+Y+WG E+G
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDG 4074
Query: 299 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDG 357
LG G+ P ++ VD ++ G H+A I+ G + TWG G
Sbjct: 4075 KLGHGNRSPCDRPRVIESLRGIEVVD-IAAGGAHSACITAAGDLFTWGKG---------- 4123
Query: 358 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
G+LGHG+ D + P +V + + + ++CG
Sbjct: 4124 --RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACG 4156
>gi|8131930|gb|AAF73141.1|AF148798_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 683
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 161/358 (44%), Gaps = 57/358 (15%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL TE G VYA G N+ G
Sbjct: 58 MFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEG 117
Query: 102 QLGISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + S + ++++ Q+S G + S+A+T DGEL+MWG NS GQ+GL
Sbjct: 118 QLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENV 177
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+P V G + G+ S VT G++ ++G G+LG + +
Sbjct: 178 TNVCVPQQVTV----GKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLV--- 230
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ P+ + + G V++A G G + ++AV
Sbjct: 231 ----NHRMPQPVPGIPGKVVQVACGG----------GHTVVLTEKAV------------- 263
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-G 339
YT+G + G LG+G+ S + + + ++CG HTA I++ G
Sbjct: 264 ---------YTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMG 314
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCGFNHT 396
+ T+G G HG LG N + PT+ NF + L VSCG HT
Sbjct: 315 LMYTFG-DGRHGKLG---------LGLENSTNQFIPTLCSNFLRFIVQL-VSCGGCHT 361
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 146/325 (44%), Gaps = 52/325 (16%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + +S G H++ +T + +LYM+G N+ GQLGLG
Sbjct: 17 FGKTQFAENI-----PSKFWFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGS 71
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K+ + PT V+ L K AA G ++ T GGKV + G G+LG G
Sbjct: 72 KS--TVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERST 129
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F + + R IK+L +AG SA + E+G ++++GD + ++ + +
Sbjct: 130 FHLISFFTSQRKIKQL--------SAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVC 181
Query: 280 RPSLI--------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
P + + G+LYT+G E G LG+ + +++ R+ P
Sbjct: 182 VPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVN--HRMPQPVP 239
Query: 320 ESP--VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPT 376
P V QV+CG HT ++E + T+G G GQLG G + + P
Sbjct: 240 GIPGKVVQVACGGGHTVVLTEKAVYTFGLG------------QFGQLGLGTFLFETSVPK 287
Query: 377 IVNFGENVKALQVSCGFNHTGALLE 401
+ ++ K ++CG NHT + +
Sbjct: 288 AIEHIKDQKISFIACGENHTALITD 312
>gi|159039901|ref|YP_001539154.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157918736|gb|ABW00164.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 556
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 153/368 (41%), Gaps = 66/368 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G +R PV ++ A+A G H+L LT G V A G N GQ
Sbjct: 113 WGRNFSGQLGNGDTTNRSTPVDVDLPAGTTITAIAAGAFHSLALTSAGTVLAWGENLHGQ 172
Query: 103 LG------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
LG +S +G SL P ++ + ++ G HS A+T G + WG NSNGQLG
Sbjct: 173 LGNGGTTNMSTPVGVSL-PAGVT-----ITAVAAGAFHSLAVTSTGAVLAWGDNSNGQLG 226
Query: 157 LGKKAAKVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G P+ + + I G S+A+T G L+WG G+LG+G
Sbjct: 227 NGTTTGSSTPVDVDLPAGTTITAVAAGVAGAAHSLALTSTGAALAWGNNADGQLGNGD-- 284
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+T+ TP + GV + AAG LHS
Sbjct: 285 -------TTNRSTPVDVDLPAGVTITAVAAGGLHSL------------------------ 313
Query: 276 NHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
+L + G + WG N +G LG G+ +P V P + ++ ++ G+ A
Sbjct: 314 ------ALTAAGAVVAWGRNVSGQLGNGTTTGSSTPVDVDLPTGAT-INAIAAGFDFGLA 366
Query: 336 ISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
++ G ++ WG + GQLG+G+ ++ P V+ V V+ G
Sbjct: 367 LTTAGAVVAWG------------RNVSGQLGNGDTINRSTPVDVDLPAGVTITAVAAGGQ 414
Query: 395 HTGALLEY 402
H+ AL+
Sbjct: 415 HSMALVAL 422
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 141/358 (39%), Gaps = 52/358 (14%)
Query: 63 VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK 122
V+ + SL A G + + ++T +A G N GQLG G S
Sbjct: 31 VMVTQAATMSLAAAENGPSAAIRASDT--YFAWGDNSDGQLGNGTTTGSSTPVDVYLPAG 88
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
+ ++ G HS A+T G + WG+N +GQLG G + P+ V+ +G
Sbjct: 89 TTITAVTAGGLHSLALTSTGAVLAWGRNFSGQLGNGDTTNRSTPV--DVDLPAGTTITAI 146
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
A G S+A+T G VL+WG G+LG+G +T+ TP + GV +
Sbjct: 147 AAGAFHSLALTSAGTVLAWGENLHGQLGNGG---------TTNMSTPVGVSLPAGVTITA 197
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP--------------------- 281
AAG HS + G V +GD + ++ + P
Sbjct: 198 VAAGAFHSLAVTSTGAVLAWGDNSNGQLGNGTTTGSSTPVDVDLPAGTTITAVAAGVAGA 257
Query: 282 ----SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
+L S G WG+N +G LG G +P V P + + V+ G H+ A++
Sbjct: 258 AHSLALTSTGAALAWGNNADGQLGNGDTTNRSTPVDVDLPAGVT-ITAVAAGGLHSLALT 316
Query: 338 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
G ++ W G + GQLG+G P V+ ++ GF+
Sbjct: 317 AAGAVVAW------------GRNVSGQLGNGTTTGSSTPVDVDLPTGATINAIAAGFD 362
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 77/160 (48%), Gaps = 5/160 (3%)
Query: 35 LQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
L AAL WGN G+LG G +R PV ++ A+A GG H+L LT G V
Sbjct: 263 LTSTGAALAWGNNADGQLGNGDTTNRSTPVDVDLPAGVTITAVAAGGLHSLALTAAGAVV 322
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSN 152
A G N GQLG G S P+ + + I+ G+ A+T G + WG+N +
Sbjct: 323 AWGRNVSGQLGNGTTTGSS-TPVDVDLPTGATINAIAAGFDFGLALTTAGAVVAWGRNVS 381
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
GQLG G + P+ V+ +G+ A G + S+A+
Sbjct: 382 GQLGNGDTINRSTPV--DVDLPAGVTITAVAAGGQHSMAL 419
>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
Length = 4777
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 138/301 (45%), Gaps = 46/301 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T +G ++ G +G+
Sbjct: 4006 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGR 4065
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 4066 LGHGDSED-QLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG- 4123
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4124 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4180
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4181 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4211
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ +++V+CG HT A S
Sbjct: 4212 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACGSAHTLAWSTS 4262
Query: 340 K 340
K
Sbjct: 4263 K 4263
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 140/303 (46%), Gaps = 44/303 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y+ GL ++G+
Sbjct: 3033 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3092
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
LG +N L L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3093 LGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-- 3150
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3151 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV--- 3207
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P++++ L G K+ A G LH + ++G+VY
Sbjct: 3208 ------RKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVY-------------------- 3241
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
WG N++G G G+ V P VQG + +V+CG H+ A +
Sbjct: 3242 ----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTVD 3290
Query: 341 ILT 343
+ T
Sbjct: 3291 VTT 3293
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 153/337 (45%), Gaps = 50/337 (14%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2923 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEAT 2982
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + I IP ++ LS K+ A+ G ++A+T GKV SWG G G+L
Sbjct: 2983 NGRLGLGLSSG-TIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3041
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G +
Sbjct: 3042 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3092
Query: 270 MLFQEGNHARRPSLI------------------------SGGELYTWGSNENGCLGIGSI 305
+ + RP L+ G +++WG + G LG G
Sbjct: 3093 LGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3152
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 364
+ + P+ ++ + V Q+ CG + + A+++ G + TWG G +L
Sbjct: 3153 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3199
Query: 365 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GHG DV P IV K + V+ G H A+ +
Sbjct: 3200 GHGTDVHVRKPQIVEGLRGKKIVHVAVGALHCLAVTD 3236
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 156/350 (44%), Gaps = 56/350 (16%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYS----LEPLRISGLKKEVVQISTGYH 133
GG TLF +T G +YATG G+LGI S LE ++ +KK V +++G
Sbjct: 3935 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGK 3992
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H A++ +GE+Y WG+ +G+LG G ++ P +E L G+ A G S +T
Sbjct: 3993 HCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIAAGGAHSACIT 4050
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSA 251
G++ +WG G GRLGHG S + P+L+ L+G +V A +G +
Sbjct: 4051 ASGELFTWGKGRYGRLGHGD---------SEDQLKPKLVDALQGHRVIDVACGSGDAQTL 4101
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRP----------------------SLISGGEL 289
C+ ++ V+ +GD K+ + + P +L G +
Sbjct: 4102 CLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4161
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGG 348
YTWG + LG GS D + P +VQG V ++ G H +E G++ TW
Sbjct: 4162 YTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW---- 4216
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + GQLG G P +V + K +V+CG HT A
Sbjct: 4217 --------GDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4258
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 162/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G +YA G G+LG+ + G P +IS L VV+ + +G H
Sbjct: 2961 GGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRH 3020
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3021 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3078
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ SWG G GRLGHG +T++ P+L+K L G +V A G +
Sbjct: 3079 SGELYSWGLGEYGRLGHGD---------NTTQLRPKLVKVLLGHRVIQVACGSRDAQTLA 3129
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3130 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3189
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG G+ + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3190 TWGKGDYFRLGHGTDVHVRKPQIVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3244
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3245 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3285
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L+ +G VY+ G D G+LG + Y EP I+ K+VVQI+ G +
Sbjct: 455 GQHFLALSTSGEVYSWGCGDGGRLGHGDAT-YLEEPALITTFSGKQTGKQVVQIACGSTY 513
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+A+T DGELY WG+ + G+LG G +++ + P V L G A G Q++AV
Sbjct: 514 SAAVTADGELYTWGRGNYGRLGHG--SSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAV 571
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+L+++L+ + + G S
Sbjct: 572 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLVEKLQDLDIVKVCCGSQFSVA 622
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ GE++
Sbjct: 623 LTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVH 682
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ + D L P + P KH IS G ++ W
Sbjct: 683 SWGSNDK----LQHFDTLF-------PNKKQPKALPGLNSKHIVGISCGPGQSFAW 727
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 146/350 (41%), Gaps = 75/350 (21%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C A + + C L L+ +G VY +L P+ I GL
Sbjct: 393 PIHCKALSSTGVTQIVCSEKVFLILSRSGAVYTQNYK-----------STTLAPMLIHGL 441
Query: 122 -KKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+++V+++ H A++ GE+Y WG G+LG G A + P + SG
Sbjct: 442 SSRKIVKLAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHGD--ATYLEEPALITTFSGKQ 499
Query: 179 T----KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
T Q A G S AVT G++ +WG G GRLGHG + TP L+
Sbjct: 500 TGKQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDV---------TTPMLVTA 550
Query: 235 LEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW 292
L+G KV A +G + + ENG+V ++W
Sbjct: 551 LKGQKVVDVACGSGDAQTLAVTENGQV------------------------------WSW 580
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 351
G + G LG G D +P+ V+ + + +V CG + + A++ +G++ TWG G +
Sbjct: 581 GDGDYGKLGRGGSDGCKTPKLVEK-LQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQ- 638
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHG D +P +++ + K + ++ G H AL +
Sbjct: 639 -----------RLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTD 677
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 116/230 (50%), Gaps = 23/230 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-KHSLKA---LACGGAHTLFLTETGCVYATGLN 98
WG GD GRLG G P + + F K + K +ACG ++ +T G +Y G
Sbjct: 470 WGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTYSAAVTADGELYTWGRG 529
Query: 99 DFGQL--GISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNG 153
++G+L G SE++ P+ ++ LK ++VV ++ +G + A+T +G+++ WG G
Sbjct: 530 NYGRLGHGSSEDVTT---PMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYG 586
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+LG G + P VE L + + G + SVA+T G+V +WG G + RLGHG
Sbjct: 587 KLGRG--GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGT 644
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ + P+L+ L+G KV A G H + + G V+ +G
Sbjct: 645 DEHV---------RYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWG 685
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 91/171 (53%), Gaps = 6/171 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ +A + + +ACG A TL +TE G V++ G D+
Sbjct: 526 WGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDY 585
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + G L ++V++ G S A+T DG++Y WGK N +LG G
Sbjct: 586 GKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD 645
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+ + P ++ L G A+G +A+T G+V SWG+ + +L H
Sbjct: 646 --EHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWGS--NDKLQH 692
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 116/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA ++ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2915 SAASIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2972
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GK+ + G +GRLG G L S + PR I L VK A +HS
Sbjct: 2973 GKIYACGEATNGRLGLG--------LSSGTIQIPRQISALSNYVVKKVA---VHSG---- 3017
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3018 -------------------GRHAM--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3056
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AAI S G++ +WG G G+LGHG++ +
Sbjct: 3057 A-LKTKRIRDIACGSSHSAAITSSGELYSWGLG------------EYGRLGHGDNTTQLR 3103
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3104 PKLVKVLLGHRVIQVACGSRDAQTL 3128
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 111/252 (44%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3895 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYAT 3952
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 3953 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 3995
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 3996 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVE 4035
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD ++ G H+A I+ G++ TWG G G+LGHG+ D + P +V+
Sbjct: 4036 VVD-IAAGGAHSACITASGELFTWGKG------------RYGRLGHGDSEDQLKPKLVDA 4082
Query: 381 GENVKALQVSCG 392
+ + + V+CG
Sbjct: 4083 LQGHRVIDVACG 4094
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY G D +
Sbjct: 580 WGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQR 639
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
L G E++ Y P + L+ K+VV I+ G H A+T +GE++ WG N Q L
Sbjct: 640 LGHGTDEHVRY---PKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWGSNDKLQHFDTL 696
Query: 156 GLGKKAAKVIP 166
KK K +P
Sbjct: 697 FPNKKQPKALP 707
>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
Length = 4733
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3005 WGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGR 3064
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +NI L+P I L +VQ++ G + A+T +G ++ WG G+LG G
Sbjct: 3065 LGHGDNIT-QLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRG- 3122
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+ + Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3123 -GSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHV-- 3179
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P +I+ L+ KV A G LH + + G+VY
Sbjct: 3180 -------RKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVY------------------- 3213
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P V G + +++V+CG H+ A
Sbjct: 3214 -----------AWGDNDHGQQGNGTTIVNRKPALVHG-LEDVHINRVACGSSHSIA 3257
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 121/249 (48%), Gaps = 19/249 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ + P + A + + + +ACGGAH+ +T TG +Y G +G+
Sbjct: 3981 WGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGR 4040
Query: 103 LGISENIGYSLEPLRIS---GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P I G K V +G + IT D ++ WG G+LG G
Sbjct: 4041 LGHGDSED-QLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4098
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG
Sbjct: 4099 -GSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG------- 4150
Query: 220 FLRSTSEYT--PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
T E+ P+ + L+G K+ A G LH + G V+ +GD ++ N
Sbjct: 4151 ----TGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNA 4206
Query: 278 ARRPSLISG 286
+RP L+S
Sbjct: 4207 IQRPRLVSA 4215
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 179/389 (46%), Gaps = 61/389 (15%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFL-TETGCVYATGLNDF 100
+WG D +LG G S+ + V S F GG+ +LF+ + G +YA G
Sbjct: 2898 VWGLNDKDQLG-GMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEGTN 2956
Query: 101 GQLGI--SENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LG+ S N+ Y P I L + V++ + +G H+ A+T+DG+++ WG+ +G+L
Sbjct: 2957 GRLGLGHSNNVPY---PRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3013
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + + P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 3014 GHGNRLN--LDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD-- 3069
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGD--------- 264
+ ++ P+LIK L G ++ A G + + + G V+ +GD
Sbjct: 3070 -------NITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRG 3122
Query: 265 --------------RAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHS 310
A++ + + G +L GE++TWG + LG GS +
Sbjct: 3123 GSEGCNIPHNIERLNALEVVQIECGAQFSL-ALTKTGEVWTWGKGDYFRLGHGSDQHVRK 3181
Query: 311 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 369
P ++ + V V+ G H A+++ G++ WG ++ H GQ G+G
Sbjct: 3182 PTVIES-LKDKKVIHVAVGALHCLAVTDTGQVYAWG---------DNDH---GQQGNGTT 3228
Query: 370 VDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+ P +V+ E+V +V+CG +H+ A
Sbjct: 3229 IVNRKPALVHGLEDVHINRVACGSSHSIA 3257
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 166/386 (43%), Gaps = 57/386 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P C A L GG TLF +T G VYATG G
Sbjct: 3875 WGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLV-GGEQTLFAVTADGKVYATGYGAGG 3933
Query: 102 QLGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI + LE ++ +KK + +++G H A++ D ++Y WG+ +G+LG
Sbjct: 3934 RLGIGGTDSVLVPTLLESIQHVFIKK--IAVNSGGKHCLALSADNDVYSWGEGDDGKLGH 3991
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + A P +E L G A G S A+T G++ +WG G GRLGHG
Sbjct: 3992 GNRLA--CETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGD---- 4045
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+LI+EL G KV A +G + CI ++ V+ +GD K+
Sbjct: 4046 -----SEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4100
Query: 276 NHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + P +L G +YTWG + LG G+ + + P++
Sbjct: 4101 DGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKK 4160
Query: 314 VQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V + ++ G H A S EG++ TW G + GQLG
Sbjct: 4161 VAA-LQGKKIISIATGSLHCVACSDEGEVFTW------------GDNDEGQLGDDTTNAI 4207
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGA 398
P +V+ + K V+CG HT A
Sbjct: 4208 QRPRLVSALQGKKITNVACGSAHTLA 4233
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 117/249 (46%), Gaps = 19/249 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNGD GRLG G ++ P + A + + + CGG ++ ++ G +Y G ++G+
Sbjct: 539 WGNGDGGRLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGR 598
Query: 103 L--GISENIGYSLEPLRISGLKKE-VVQISTG--YHHSSAITVDGELYMWGKNSNGQLGL 157
L G +E+ L P IS L E +++++ G Y H+ IT G++Y WG G+LG
Sbjct: 599 LGHGTAED---CLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGR 655
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G +P +E L + Q G + SVA++ G V +WG G +LGH E ++
Sbjct: 656 GGSDGS--KLPRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENV 713
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
P +++ L KV + G H + + G VY +G ++
Sbjct: 714 ---------RFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSSELF 764
Query: 278 ARRPSLISG 286
++P LI
Sbjct: 765 VQQPRLIEA 773
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 157/354 (44%), Gaps = 78/354 (22%)
Query: 89 TGC-VYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
GC V+ GLND QLG + + L P+ I+G K + +S
Sbjct: 2892 VGCRVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSH------- 2944
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGG 195
+G+LY G+ +NG+LGLG + +P P + LS K+ A+ G + ++A+T
Sbjct: 2945 ---EGKLYACGEGTNGRLGLGH--SNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLD 2999
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV SWG G G+LGHG ++ P++I+ L K++ A G HSA I
Sbjct: 3000 GKVFSWGEGEDGKLGHGNRLNL---------DKPKMIEALRSKKIRDIACGSSHSAAITS 3050
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISG------------------------GELYT 291
+G +Y +G ++ + +P LI G +++
Sbjct: 3051 SGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFS 3110
Query: 292 WGSNENGCLGIG---SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 347
WG + G LG G ++ H+ ER+ V Q+ CG + + A+++ G++ TWG G
Sbjct: 3111 WGDGDFGKLGRGGSEGCNIPHNIERLNA----LEVVQIECGAQFSLALTKTGEVWTWGKG 3166
Query: 348 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHG+D PT++ ++ K + V+ G H A+ +
Sbjct: 3167 DYF------------RLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTD 3208
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 105/220 (47%), Gaps = 16/220 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG G+ E P + SA + +ACG AHTL +T G VY+ G D+
Sbjct: 591 WGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDY 650
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G L P I L+ ++VQ+ G S A++ DG +Y WGK + LG
Sbjct: 651 GKLGRGGSDGSKL-PRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWK--LGH 707
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + P VE L +LG +A+T G+V WG + ++ E +
Sbjct: 708 PTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSSELFV-- 765
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGR 258
PRLI+ L+G KV G S A D+N R
Sbjct: 766 -------QQPRLIEALKGQKVVGVCCGPAQSFAWTDDNER 798
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 133/343 (38%), Gaps = 65/343 (18%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P C + ++K + C L LT+TG V+ + S + E +SG+
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFF--------MYYSSDTQCPQEMTGLSGI 513
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+ H A+T D E+Y WG G+LG G + K PT ++ L G
Sbjct: 514 NMIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTK--EEPTLIQALKGKDIID 571
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
G S A++ G + +WG G GRLGHG L TP +I L +
Sbjct: 572 VECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCL---------TPTMISALSDEHII 622
Query: 242 IAAAG--FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
A G + H+ CI G+V Y+WG + G
Sbjct: 623 KVACGSFYAHTLCITSQGKV------------------------------YSWGDGDYGK 652
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG G D P ++ + QV CG + + A+SE G + TWG G
Sbjct: 653 LGRGGSDGSKLPRLIEK-LQNVKIVQVYCGAQFSVALSEDGHVYTWGKG----------- 700
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G +LGH + + P +V + K + VS G +H AL +
Sbjct: 701 -EGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTD 742
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 123/267 (46%), Gaps = 56/267 (20%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
Q STG S TV +++WG N QLG G K +KV +P + + LS ++ A G
Sbjct: 2882 QDSTGEPSS---TVGCRVFVWGLNDKDQLG-GMKGSKV-KLPVQSDFLSQLWPIHIAGGS 2936
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+ V+ GK+ + G G +GRLG G +++ PR I L +K A
Sbjct: 2937 KSLFIVSHEGKLYACGEGTNGRLGLGHSNNV---------PYPRPIPFLSQYVIKKVA-- 2985
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSID 306
+HS G HA +L G++++WG E+G LG G+
Sbjct: 2986 -VHSG-----------------------GKHAM--ALTLDGKVFSWGEGEDGKLGHGNRL 3019
Query: 307 VLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLG 365
L P+ ++ S+ + ++CG H+AAI S G++ TWG G G+LG
Sbjct: 3020 NLDKPKMIEALRSKK-IRDIACGSSHSAAITSSGELYTWGLG------------EYGRLG 3066
Query: 366 HGNDVDYIHPTIVNFGENVKALQVSCG 392
HG+++ + P ++ + +QV+CG
Sbjct: 3067 HGDNITQLKPKLIKSLVGHRIVQVACG 3093
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 127/335 (37%), Gaps = 101/335 (30%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV-IP---------------------------------- 166
G +Y WG N GQLG G + AKV IP
Sbjct: 3870 GTIYGWGHNHRGQLG-GIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYATG 3928
Query: 167 ----------------IPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+PT +E + +F K+ A+ G + +A++ V SWG G G+
Sbjct: 3929 YGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGK 3988
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG R E TP+LI+ L+G ++ A G HSA I G++Y +G
Sbjct: 3989 LGHGN--------RLACE-TPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYG 4039
Query: 269 KMLFQEGNHARRPSLI------------------------SGGELYTWGSNENGCLGIGS 304
++ + +P LI +++WG + G LG G
Sbjct: 4040 RLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 4099
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 363
D P++++ + V +V CG + + A++ G + TWG G H +
Sbjct: 4100 SDGCKVPKKIES-LAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYH------------R 4146
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
LGHG P V + K + ++ G H A
Sbjct: 4147 LGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVA 4181
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 47/224 (20%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G G + WG G+LG + + + + T R ++ + G + A
Sbjct: 3868 GSGTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTA------- 3920
Query: 254 DENGRVYIFG------------DRAVDKMLFQEGNHA--RRPSLISGG----------EL 289
+G+VY G D + L + H ++ ++ SGG ++
Sbjct: 3921 --DGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDV 3978
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGG 348
Y+WG ++G LG G+ +P+ ++ +D ++CG H+AAI S G++ TWG G
Sbjct: 3979 YSWGEGDDGKLGHGNRLACETPKLIEALQGYEIID-IACGGAHSAAITSTGQLYTWGKG- 4036
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
G+LGHG+ D + P ++ K + V+CG
Sbjct: 4037 -----------RYGRLGHGDSEDQLKPKLIEELVGYKVIDVACG 4069
>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus laevis]
gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
Length = 526
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 115/224 (51%), Gaps = 14/224 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG GS P V + ++ACG H++ LT G VYA G N+ G
Sbjct: 98 WGHNAYSQLGNGSTNQALSPCQVSTNLINKKAHSVACGSHHSMVLTCDGEVYAWGYNNSG 157
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
Q+G + S L+ K V+ I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 158 QVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSS 217
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P P ++ L GI +Q G+ ++A+T G + +WGA G+LG G
Sbjct: 218 GNQ--PTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGN------- 268
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y ++I + E + V+IAA H SA ++G+VY++G
Sbjct: 269 -KSNQSYPVQVIVDKERI-VEIAACHSSHTSAAKSQSGQVYMWG 310
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 139/310 (44%), Gaps = 49/310 (15%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
+ G G LG G +S P + +L+ G G H + +T G VY+ G N +
Sbjct: 44 VMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAY 103
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG + + +L P ++S + K+ ++ G HHS +T DGE+Y WG N++GQ+G G
Sbjct: 104 SQLG-NGSTNQALSPCQVSTNLINKKAHSVACGSHHSMVLTCDGEVYAWGYNNSGQVGSG 162
Query: 159 KKAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
A + PIP KV CL A G S+AV G+V +WG G+G+LG G
Sbjct: 163 STANQ--PIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLG----- 215
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S ++ TP I L+G++V+ G+ H+
Sbjct: 216 ----SSGNQPTPCRIAALQGIRVEQVVCGYAHTL-------------------------- 245
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 336
+L G +Y WG+N G LG G+ P +V E V+ +C HT+A
Sbjct: 246 ----ALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVD-KERIVEIAACHSSHTSAAK 300
Query: 337 -SEGKILTWG 345
G++ WG
Sbjct: 301 SQSGQVYMWG 310
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 138/326 (42%), Gaps = 62/326 (19%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSS 136
G L++T+ V+ G N G LG + +EP RI L K +V +S G H
Sbjct: 29 AGNEVLYITKNDEVFVMGTNSSGCLGTGDAQSI-IEPRRIDMLSGKRIVSLSYGSGPHVV 87
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVAVT 193
+T DGE+Y WG N+ QLG G + P + + K+A A G S+ +T
Sbjct: 88 IVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVS----TNLINKKAHSVACGSHHSMVLT 143
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSAC 252
G+V +WG SG++G G + ++ PR + L+ V A G + S
Sbjct: 144 CDGEVYAWGYNNSGQVGSGS---------TANQPIPRKVTSCLQNKTVIGIACGQMSSMA 194
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ +NG E+Y WG N NG LG+GS +P
Sbjct: 195 VVDNG------------------------------EVYAWGYNGNGQLGLGSSGNQPTPC 224
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
R+ V+QV CG+ HT A+++ ++ + WG +S GQLG GN +
Sbjct: 225 RI-AALQGIRVEQVVCGYAHTLALTDEGVM-YAWGA----------NSYGQLGTGNKSNQ 272
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGA 398
+P V + +C +HT A
Sbjct: 273 SYPVQVIVDKERIVEIAACHSSHTSA 298
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 111/268 (41%), Gaps = 58/268 (21%)
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTG 194
IT + E+++ G NS+G LG G A+ I P +++ LSG + +L + V VT
Sbjct: 36 ITKNDEVFVMGTNSSGCLGTGD--AQSIIEPRRIDMLSG--KRIVSLSYGSGPHVVIVTS 91
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G+V SWG +LG+G + L S + + LI + K A G HS
Sbjct: 92 DGEVYSWGHNAYSQLGNGSTNQAL----SPCQVSTNLINK----KAHSVACGSHHSMV-- 141
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
L GE+Y WG N +G +G GS P +V
Sbjct: 142 ----------------------------LTCDGEVYAWGYNNSGQVGSGSTANQPIPRKV 173
Query: 315 QGPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
V ++CG + A + G++ WG+ G+ GQLG G+ +
Sbjct: 174 TSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGN------------GQLGLGSSGNQP 221
Query: 374 HPTIVNFGENVKALQVSCGFNHTGALLE 401
P + + ++ QV CG+ HT AL +
Sbjct: 222 TPCRIAALQGIRVEQVVCGYAHTLALTD 249
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLGS ++ P +A + ++ + CG AHTL LT+ G +YA G N +GQ
Sbjct: 204 WGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQ 263
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG S P+++ K+ +V+I+ + H S+A + G++YMWG+ GQ
Sbjct: 264 LGTGNKSNQSY-PVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWGQ-CRGQ------ 315
Query: 161 AAKVIPIPTKVECLSGIF 178
+ + P T C +F
Sbjct: 316 -SVITPHLTHFSCTDDVF 332
>gi|218197208|gb|EEC79635.1| hypothetical protein OsI_20852 [Oryza sativa Indica Group]
Length = 1038
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 172/402 (42%), Gaps = 71/402 (17%)
Query: 14 LKQDIKLGSKLGIC-KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
L+ D+ L + C R I T ++ WG GRLG G+ RP + + +
Sbjct: 255 LESDVVLDVQQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSN 314
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDF--GQLGISENIGYSLEPLRISGLKK--EVVQI 128
++ +ACG HT +T +G +Y G + G LG + + L P R+SG + +V+ +
Sbjct: 315 VEYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWL-PKRVSGPLEGLQVLSV 373
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
+ G HS+ G+L+ +G + G LG G + + + P +VE LSG + A G
Sbjct: 374 ACGSWHSALTMSSGKLFTFGDGTFGSLGHGDRES--VAYPKEVEALSGFRAMKVACGVWH 431
Query: 189 SVAVTG----------GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
S A+ K+ +WG G RLGHG + + L P ++ L
Sbjct: 432 SAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKL---------VPTCVQAL--- 479
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENG 298
+D N G H+ +L + G ++T GS+ NG
Sbjct: 480 --------------VDHNFHQVACG-------------HSMTVALATSGHVFTMGSSNNG 512
Query: 299 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDG 357
LG D P VQ V+++SCG H AA+ S ++ TWG G +
Sbjct: 513 QLGNPKADG-KQPCMVQDKLGNELVEEISCGSNHVAALTSRSEVYTWGMGAN-------- 563
Query: 358 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G+LGHG+ D PT+V+ ++ +SCG N T +
Sbjct: 564 ----GRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCI 601
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 113/268 (42%), Gaps = 59/268 (22%)
Query: 142 GELYMWGK------NSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
G++Y+WG+ S G L K +IP P + + + + +Q A G T
Sbjct: 221 GDVYVWGEVWTEVLPSEGSSNYLCSKTDFLIPKPLESDVVLDV--QQIACGSRHIGLTTR 278
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G+V +WG GRLGHG ++ I P+L++ L V+ A G H+ +
Sbjct: 279 QGEVFTWGEELGGRLGHGTDTDIC---------RPKLVESLAVSNVEYIACGEFHTCVVT 329
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
+G +Y +GD GS G LG G+ P+RV
Sbjct: 330 ASGDLYDWGD----------------------------GSYNAGLLGHGTGVSHWLPKRV 361
Query: 315 QGPFSESPVDQVSCG-WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
GP V V+CG W +S GK+ T+G GTF G LGHG+
Sbjct: 362 SGPLEGLQVLSVACGSWHSALTMSSGKLFTFG----DGTF--------GSLGHGDRESVA 409
Query: 374 HPTIVNFGENVKALQVSCGFNHTGALLE 401
+P V +A++V+CG H+ A++E
Sbjct: 410 YPKEVEALSGFRAMKVACGVWHSAAIVE 437
>gi|194221881|ref|XP_001489975.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Equus
caballus]
Length = 531
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 140/301 (46%), Gaps = 49/301 (16%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLIPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
TP V++AA LHS C+++ + G +A +L
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ----IVCG-------------YAHTLALTDE 251
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTW 344
G LY WG+N G LG G+ + L SP + E V+ +C HT+A G + W
Sbjct: 252 GLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMW 310
Query: 345 G 345
G
Sbjct: 311 G 311
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 138/312 (44%), Gaps = 51/312 (16%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T + E++++G N + LG G + + IP K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--IPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V A G HS + +G V+ +G ++ G+ A +P+
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV S V+Q+
Sbjct: 180 IKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG ++ GQLG GN + + P + +
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHIMVEKERVV 287
Query: 387 LQVSCGFNHTGA 398
+C HT A
Sbjct: 288 EIAACHSAHTSA 299
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
>gi|327268361|ref|XP_003218966.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Anolis carolinensis]
Length = 788
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 131/298 (43%), Gaps = 63/298 (21%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LG GS + +P A + +K ACG HTL TE G VYA G N G
Sbjct: 58 MFGSNNWGQLGFGSKNAVNKPTCVKALKPEKVKLAACGRNHTLICTEQGNVYAAGGNSEG 117
Query: 102 QLGISEN--------IGYSLEPLRISGLK------------------------------- 122
QLG+ + I + + +I L
Sbjct: 118 QLGLGDTEERSTFHLISFFTKQHKIKQLAAGSYTSAVLTEDGQLVMWGDNSEGQIGLGDK 177
Query: 123 ------------KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
K V IS GY+HS+ IT DGELY +G+ NG+LGL K K +P
Sbjct: 178 AYVSVPHQVDIGKPVSCISCGYYHSALITQDGELYTFGEPENGKLGLSPKQLKNHKLPQL 237
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
V +SG +K A G V G V ++G G G+LGHG F+ TSE P+
Sbjct: 238 VSGISGKVSKVACGGGH--TVVLAEGDVYTFGLGQYGQLGHGT------FVFETSE--PK 287
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISG 286
+ L K+ A G H+A I ENG +Y FGD K+ E N+ + P+L S
Sbjct: 288 TVDHLGKHKICHIACGENHTALITENGLMYTFGDGRHGKLGLGEENYTNQFVPTLCSN 345
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 152/339 (44%), Gaps = 57/339 (16%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
+ E+G V+ FG+ +EN+ P + + + IS G H+S +T +G+LY
Sbjct: 8 VPESGAVFT-----FGKCKFAENV-----PSKFWFKNDKPLHISCGDEHTSVVTENGKLY 57
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
M+G N+ GQLG G K A + PT V+ L K AA G ++ T G V + G
Sbjct: 58 MFGSNNWGQLGFGSKNA--VNKPTCVKALKPEKVKLAACGRNHTLICTEQGNVYAAGGNS 115
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LG G RST K+ K+K AAG SA + E+G++ ++GD
Sbjct: 116 EGQLGLGDTEE-----RSTFHLISFFTKQH---KIKQLAAGSYTSAVLTEDGQLVMWGDN 167
Query: 266 AVDKMLFQEGNHARRPSLIS--------------------GGELYTWGSNENGCLGIGSI 305
+ ++ + + P + GELYT+G ENG LG+
Sbjct: 168 SEGQIGLGDKAYVSVPHQVDIGKPVSCISCGYYHSALITQDGELYTFGEPENGKLGLSPK 227
Query: 306 DVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ + P+ V G + V +V+CG HT ++EG + T+G G GQ
Sbjct: 228 QLKNHKLPQLVSGISGK--VSKVACGGGHTVVLAEGDVYTFGLG------------QYGQ 273
Query: 364 LGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
LGHG V + P V+ K ++CG NHT + E
Sbjct: 274 LGHGTFVFETSEPKTVDHLGKHKICHIACGENHTALITE 312
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 146/334 (43%), Gaps = 56/334 (16%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
++CG HT +TE G +Y G N++GQLG + +P + LK E V+++ G +H
Sbjct: 40 ISCGDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAVN-KPTCVKALKPEKVKLAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
+ T G +Y G NS GQLGLG + +I TK + KQ A G S
Sbjct: 99 TLICTEQGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTKQHKI-----KQLAAGSYTSA 153
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+T G+++ WG G++G G ++ + P + G V + G+ HS
Sbjct: 154 VLTEDGQLVMWGDNSEGQIGLGDKAYV---------SVPHQVDI--GKPVSCISCGYYHS 202
Query: 251 ACIDENGRVYIFGDRAVDKMLF---QEGNHARRPSLISG--------------------G 287
A I ++G +Y FG+ K+ Q NH + P L+SG G
Sbjct: 203 ALITQDGELYTFGEPENGKLGLSPKQLKNH-KLPQLVSGISGKVSKVACGGGHTVVLAEG 261
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 347
++YT+G + G LG G+ S + + + ++CG HTA I+E ++
Sbjct: 262 DVYTFGLGQYGQLGHGTFVFETSEPKTVDHLGKHKICHIACGENHTALITENGLMYTFGD 321
Query: 348 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NF 380
G HG LG N + PT+ NF
Sbjct: 322 GRHGKLG---------LGEENYTNQFVPTLCSNF 346
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + + ++ACGG H L
Sbjct: 319 FGDGRHGKLGLGEENYTNQFVPTLCSNFLRFIVHSVACGGCHMLVF 364
>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 3894
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 2166 WGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGR 2225
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +NI L+P I L +VQ++ G + A+T +G ++ WG G+LG G
Sbjct: 2226 LGHGDNIT-QLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRG- 2283
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+ + Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 2284 -GSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHV-- 2340
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P +I+ L+ KV A G LH + + G+VY
Sbjct: 2341 -------RKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVY------------------- 2374
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P V G + +++V+CG H+ A
Sbjct: 2375 -----------AWGDNDHGQQGNGTTIVNRKPALVHG-LEDVHINRVACGSSHSIA 2418
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 168/370 (45%), Gaps = 69/370 (18%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFL-TETGCVYATGLNDF 100
+WG D +LG G S+ + V S F GG+ +LF+ + G +YA G
Sbjct: 2059 VWGLNDKDQLG-GMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEGTN 2117
Query: 101 GQLGI--SENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LG+ S N+ Y P I L + V++ + +G H+ A+T+DG+++ WG+ +G+L
Sbjct: 2118 GRLGLGHSNNVPY---PRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 2174
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + + P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 2175 GHGNRLN--LDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD-- 2230
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ ++ P+LIK L G ++ A G
Sbjct: 2231 -------NITQLKPKLIKSLVGHRIVQVACG----------------------------S 2255
Query: 276 NHARRPSLISGGELYTWGSNENGCLGIGS---IDVLHSPERVQGPFSESPVDQVSCGWKH 332
A+ +L G +++WG + G LG G ++ H+ ER+ V Q+ CG +
Sbjct: 2256 RDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNA----LEVVQIECGAQF 2311
Query: 333 TAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 391
+ A+++ G++ TWG G +LGHG+D PT++ ++ K + V+
Sbjct: 2312 SLALTKTGEVWTWGKGDYF------------RLGHGSDQHVRKPTVIESLKDKKVIHVAV 2359
Query: 392 GFNHTGALLE 401
G H A+ +
Sbjct: 2360 GALHCLAVTD 2369
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 121/249 (48%), Gaps = 19/249 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ + P + A + + + +ACGGAH+ +T TG +Y G +G+
Sbjct: 3142 WGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGR 3201
Query: 103 LGISENIGYSLEPLRIS---GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P I G K V +G + IT D ++ WG G+LG G
Sbjct: 3202 LGHGDSED-QLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 3259
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG
Sbjct: 3260 -GSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG------- 3311
Query: 220 FLRSTSEYT--PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
T E+ P+ + L+G K+ A G LH + G V+ +GD ++ N
Sbjct: 3312 ----TGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNA 3367
Query: 278 ARRPSLISG 286
+RP L+S
Sbjct: 3368 IQRPRLVSA 3376
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 166/386 (43%), Gaps = 57/386 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P C A L GG TLF +T G VYATG G
Sbjct: 3036 WGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLV-GGEQTLFAVTADGKVYATGYGAGG 3094
Query: 102 QLGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI + LE ++ +KK + +++G H A++ D ++Y WG+ +G+LG
Sbjct: 3095 RLGIGGTDSVLVPTLLESIQHVFIKK--IAVNSGGKHCLALSADNDVYSWGEGDDGKLGH 3152
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + A P +E L G A G S A+T G++ +WG G GRLGHG
Sbjct: 3153 GNRLA--CETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGD---- 3206
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+LI+EL G KV A +G + CI ++ V+ +GD K+
Sbjct: 3207 -----SEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 3261
Query: 276 NHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + P +L G +YTWG + LG G+ + + P++
Sbjct: 3262 DGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKK 3321
Query: 314 VQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V + ++ G H A S EG++ TW G + GQLG
Sbjct: 3322 VAA-LQGKKIISIATGSLHCVACSDEGEVFTW------------GDNDEGQLGDDTTNAI 3368
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGA 398
P +V+ + K V+CG HT A
Sbjct: 3369 QRPRLVSALQGKKITNVACGSAHTLA 3394
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 124/269 (46%), Gaps = 56/269 (20%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V Q STG S TV +++WG N QLG G K +KV +P + + LS ++ A
Sbjct: 2041 VAQDSTGEPSS---TVGCRVFVWGLNDKDQLG-GMKGSKV-KLPVQSDFLSQLWPIHIAG 2095
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G + V+ GK+ + G G +GRLG G +++ PR I L +K A
Sbjct: 2096 GSKSLFIVSHEGKLYACGEGTNGRLGLGHSNNV---------PYPRPIPFLSQYVIKKVA 2146
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGS 304
+HS G HA +L G++++WG E+G LG G+
Sbjct: 2147 ---VHSG-----------------------GKHAM--ALTLDGKVFSWGEGEDGKLGHGN 2178
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQ 363
L P+ ++ S+ + ++CG H+AAI S G++ TWG G G+
Sbjct: 2179 RLNLDKPKMIEALRSKK-IRDIACGSSHSAAITSSGELYTWGLG------------EYGR 2225
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCG 392
LGHG+++ + P ++ + +QV+CG
Sbjct: 2226 LGHGDNITQLKPKLIKSLVGHRIVQVACG 2254
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 127/335 (37%), Gaps = 101/335 (30%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV-IP---------------------------------- 166
G +Y WG N GQLG G + AKV IP
Sbjct: 3031 GTIYGWGHNHRGQLG-GIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYATG 3089
Query: 167 ----------------IPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+PT +E + +F K+ A+ G + +A++ V SWG G G+
Sbjct: 3090 YGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGK 3149
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG R E TP+LI+ L+G ++ A G HSA I G++Y +G
Sbjct: 3150 LGHGN--------RLACE-TPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYG 3200
Query: 269 KMLFQEGNHARRPSLI------------------------SGGELYTWGSNENGCLGIGS 304
++ + +P LI +++WG + G LG G
Sbjct: 3201 RLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 3260
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 363
D P++++ + V +V CG + + A++ G + TWG G H +
Sbjct: 3261 SDGCKVPKKIES-LAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYH------------R 3307
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
LGHG P V + K + ++ G H A
Sbjct: 3308 LGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVA 3342
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 47/224 (20%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G G + WG G+LG + + + + T R ++ + G + A
Sbjct: 3029 GSGTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTA------- 3081
Query: 254 DENGRVYIFG------------DRAVDKMLFQEGNHA--RRPSLISGG----------EL 289
+G+VY G D + L + H ++ ++ SGG ++
Sbjct: 3082 --DGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDV 3139
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGG 348
Y+WG ++G LG G+ +P+ ++ +D ++CG H+AAI S G++ TWG G
Sbjct: 3140 YSWGEGDDGKLGHGNRLACETPKLIEALQGYEIID-IACGGAHSAAITSTGQLYTWGKG- 3197
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
G+LGHG+ D + P ++ K + V+CG
Sbjct: 3198 -----------RYGRLGHGDSEDQLKPKLIEELVGYKVIDVACG 3230
>gi|293346825|ref|XP_001064216.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
norvegicus]
Length = 1149
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 122/249 (48%), Gaps = 18/249 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG S +S RP A + ++CG H++ + G V+ G GQL
Sbjct: 204 GDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQL 263
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E+ S P +I+ L +++Q+S G++HS A++ DG+++ WG N GQLGLG
Sbjct: 264 GIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLC 323
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P KV+ L GI Q A G S A++ G WG SG+L S+
Sbjct: 324 SQAS-PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSA------ 376
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
Y P I L+ + V + G+ H++ + E+G+V+ FG + +++ H+ R
Sbjct: 377 KEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQL-----QHSPRSG 431
Query: 281 ---PSLISG 286
P LI G
Sbjct: 432 RGGPQLIEG 440
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 134/278 (48%), Gaps = 47/278 (16%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
LKA A G H+L L VY+ G N GQLG ++ + P I L + +S G
Sbjct: 182 LKA-ASGERHSLLLFSNHRVYSCGDNSRGQLG-QKSPQSTKRPEPIQALSTVHIDLVSCG 239
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+ G ++ WG S GQLG+G ++ ++ +PTK+ L+GI Q + G S+A
Sbjct: 240 KEHSVAVCHQGRVFTWGAGSEGQLGIG-ESKEISFMPTKINSLAGIKIIQVSCGHYHSLA 298
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ G+V SWG+ G+LG G S+ +P+ +K LEG+ + AAG
Sbjct: 299 LSEDGQVFSWGSNRQGQLGLGN--------NLCSQASPQKVKSLEGIPLAQVAAG----- 345
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGI---GSIDVL 308
G H+ SL+ G + WG+N +G L + + + +
Sbjct: 346 -----------------------GTHSFALSLM--GTSFGWGNNRSGQLALSGNSAKEQI 380
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 345
+ P + G V +SCG++HT+ ++E G++ T+G
Sbjct: 381 YKPHSI-GALKTLNVVYISCGYEHTSVLTEDGQVFTFG 417
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 135/293 (46%), Gaps = 57/293 (19%)
Query: 114 EPLRI---SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
+P R+ +GLK +++ ++G HS + + +Y G NS GQLG +K+ + P
Sbjct: 169 QPRRLEAGTGLK--LLKAASGERHSLLLFSNHRVYSCGDNSRGQLG--QKSPQSTKRPEP 224
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
++ LS + + G E SVAV G+V +WGAG G+LG G+ I + P
Sbjct: 225 IQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEI--------SFMPT 276
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
I L G+K+ + G HS + E+G+V+
Sbjct: 277 KINSLAGIKIIQVSCGHYHSLALSEDGQVF------------------------------ 306
Query: 291 TWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 349
+WGSN G LG+G+ + SP++V+ P+ QV+ G H+ A+S ++GWG +
Sbjct: 307 SWGSNRQGQLGLGNNLCSQASPQKVKS-LEGIPLAQVAAGGTHSFALSLMGT-SFGWGNN 364
Query: 350 H-GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G + G+S+ Q+ P + + + + +SCG+ HT L E
Sbjct: 365 RSGQLALSGNSAKEQI--------YKPHSIGALKTLNVVYISCGYEHTSVLTE 409
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 3/176 (1%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G S E + P ++ + ++CG H+L L+E G V++ G N G
Sbjct: 255 WGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQG 314
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ N+ P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 315 QLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGN 374
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
A + I P + L + + G+E + +T G+V ++G S +L H S
Sbjct: 375 SAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRS 430
>gi|148654597|ref|YP_001274802.1| regulator of chromosome condensation, RCC1 [Roseiflexus sp. RS-1]
gi|148566707|gb|ABQ88852.1| regulator of chromosome condensation, RCC1 [Roseiflexus sp. RS-1]
Length = 837
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 160/397 (40%), Gaps = 61/397 (15%)
Query: 28 KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLT 87
R + LQ R A WG G+LG G+ E R PV S + +LA G HT L
Sbjct: 435 DRHTCAVLQTRTAQCWGENSPGQLGDGTTERRLTPVTVSGLSGAT--SLAAGDGHTCALM 492
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
G N GQLG L P+ +SGL ++ G H+ A+ + W
Sbjct: 493 NVRTAQCWGRNSSGQLG-DGTTERRLTPVTVSGLSAATA-LAAGDSHTCALLDTRRVRCW 550
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G+NS+GQLG G + +V P+ V LSG A G + + G V WG SG
Sbjct: 551 GRNSSGQLGDGTRTDRVTPV--AVSGLSGA--TALAAGNSHTCTLLDTGTVQCWGWNSSG 606
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LG G T TP + L GV AAG H+ + ++G V +G +
Sbjct: 607 QLGDGTR---------TDRVTPAAVSGLSGVTAL--AAGANHTCALMDSGTVQCWGRNSS 655
Query: 268 DKMLFQEGNHARR--PSLISG--------------------GELYTWGSNENGCLGIGSI 305
++ +G R P+ +SG G + WG N +G LG G+
Sbjct: 656 GQL--GDGTRTDRVTPAAVSGLSGVTALAAGANHTCALMDSGTVQCWGRNSSGQLGDGTT 713
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 364
+P V G S V + G HT A+ G + WG + GQL
Sbjct: 714 TDRVTPAAVSG---LSGVTALVAGANHTCALMPTGTVQCWG------------KNEFGQL 758
Query: 365 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G G D + P V+ + AL + G HT A+L
Sbjct: 759 GDGTTTDRLTPVAVSGLSGITAL--AAGSEHTCAVLN 793
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 162/392 (41%), Gaps = 61/392 (15%)
Query: 33 STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
+ LQ WG G+LG G+ E R PV S + ALA GG HT L +TG V
Sbjct: 340 AVLQTETVQCWGLNSSGQLGDGTTERRLTPVSVSGLSGST--ALAAGGVHTCALLQTGTV 397
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
G N+FGQLG L P+ +SGL ++ G H+ A+ WG+NS
Sbjct: 398 QCWGRNEFGQLG-DGTTERRLTPVVVSGLSGATA-LTAGDRHTCAVLQTRTAQCWGENSP 455
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG G ++ P+ V LSG + A G + A+ WG SG+LG G
Sbjct: 456 GQLGDGTTERRLTPV--TVSGLSGATSLAA--GDGHTCALMNVRTAQCWGRNSSGQLGDG 511
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
L TP + L AAG H+ + + RV +G + ++
Sbjct: 512 TTERRL---------TPVTVSGLSAATAL--AAGDSHTCALLDTRRVRCWGRNSSGQL-- 558
Query: 273 QEGNHARR--PSLISG--------------------GELYTWGSNENGCLGIGSIDVLHS 310
+G R P +SG G + WG N +G LG G+ +
Sbjct: 559 GDGTRTDRVTPVAVSGLSGATALAAGNSHTCTLLDTGTVQCWGWNSSGQLGDGTRTDRVT 618
Query: 311 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 369
P V G S V ++ G HT A+ + G + W G +S GQLG G
Sbjct: 619 PAAVSG---LSGVTALAAGANHTCALMDSGTVQCW------------GRNSSGQLGDGTR 663
Query: 370 VDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
D + P V+ V AL + G NHT AL++
Sbjct: 664 TDRVTPAAVSGLSGVTAL--AAGANHTCALMD 693
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 167/396 (42%), Gaps = 59/396 (14%)
Query: 28 KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLT 87
R + L R WG ++G+LG G+ RW PV S + ALA GG HT
Sbjct: 185 DRHTCALLDTRTVRCWGENEHGQLGDGTTNDRWTPVAVSGLS--GVTALAAGGRHTCAAL 242
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
TG V G N GQLG L P+ +SGL ++ G+ H+ A+ G + W
Sbjct: 243 NTGTVQCWGGNGAGQLGDGTRTSR-LTPMAVSGLSGATA-LAAGFEHTCALLDTGTVRCW 300
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G NS+GQLG G ++ P+ V LSG+ T AA F + AV V WG SG
Sbjct: 301 GLNSSGQLGDGTTERRLTPV--AVSGLSGV-TALAAGDF-HTCAVLQTETVQCWGLNSSG 356
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LG G L TP + L G AAG +H+ + + G V +G
Sbjct: 357 QLGDGTTERRL---------TPVSVSGLSGSTAL--AAGGVHTCALLQTGTVQCWGRNEF 405
Query: 268 DKMLFQEGNHARR--PSLISG---------GELYT-----------WGSNENGCLGIGSI 305
++ +G RR P ++SG G+ +T WG N G LG G+
Sbjct: 406 GQL--GDGTTERRLTPVVVSGLSGATALTAGDRHTCAVLQTRTAQCWGENSPGQLGDGTT 463
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 365
+ +P V G S ++ G HT A+ + T G +S GQLG
Sbjct: 464 ERRLTPVTVSG---LSGATSLAAGDGHTCALMNVR-----------TAQCWGRNSSGQLG 509
Query: 366 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G + P V+ AL + G +HT ALL+
Sbjct: 510 DGTTERRLTPVTVSGLSAATAL--AAGDSHTCALLD 543
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 163/382 (42%), Gaps = 61/382 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV S + ALA G HT L TG V GLN GQ
Sbjct: 100 WGWNGSGQLGDGTTTDRAMPVAVSGLS--GVTALAAGRYHTCALLNTGTVQCWGLNSSGQ 157
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I + P+ +SGL V+ ++ G H+ A+ + WG+N +GQLG G
Sbjct: 158 LG-DWTITNRVTPVAVSGLSG-VIALAAGDRHTCALLDTRTVRCWGENEHGQLGDGTTND 215
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V LSG+ A G + A G V WG G+G+LG G
Sbjct: 216 RWTPV--AVSGLSGV--TALAAGGRHTCAALNTGTVQCWGGNGAGQLGDGTR-------- 263
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
TS TP + L G AAGF H+ + + G V +G + ++ +G RR
Sbjct: 264 -TSRLTPMAVSGLSGATAL--AAGFEHTCALLDTGTVRCWGLNSSGQL--GDGTTERRLT 318
Query: 281 PSLISG---------GELYT-----------WGSNENGCLGIGSIDVLHSPERVQGPFSE 320
P +SG G+ +T WG N +G LG G+ + +P V G
Sbjct: 319 PVAVSGLSGVTALAAGDFHTCAVLQTETVQCWGLNSSGQLGDGTTERRLTPVSVSGLSGS 378
Query: 321 SPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
+ ++ G HT A+ + G + W G + GQLG G + P +V+
Sbjct: 379 T---ALAAGGVHTCALLQTGTVQCW------------GRNEFGQLGDGTTERRLTPVVVS 423
Query: 380 FGENVKALQVSCGFNHTGALLE 401
AL + G HT A+L+
Sbjct: 424 GLSGATAL--TAGDRHTCAVLQ 443
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 139/332 (41%), Gaps = 43/332 (12%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
+ R A WG G+LG G+ E R PV S + ALA G +HT L +T V
Sbjct: 492 MNVRTAQCWGRNSSGQLGDGTTERRLTPVTVSGLSAAT--ALAAGDSHTCALLDTRRVRC 549
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG + P+ +SGL ++ G H+ + G + WG NS+GQ
Sbjct: 550 WGRNSSGQLGDGTRTDR-VTPVAVSGLSGATA-LAAGNSHTCTLLDTGTVQCWGWNSSGQ 607
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + +V P V LSG+ A G + A+ G V WG SG+LG G
Sbjct: 608 LGDGTRTDRVTPA--AVSGLSGV--TALAAGANHTCALMDSGTVQCWGRNSSGQLGDGTR 663
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
T TP + L GV AAG H+ + ++G V +G + ++
Sbjct: 664 ---------TDRVTPAAVSGLSGVTAL--AAGANHTCALMDSGTVQCWGRNSSGQLGDGT 712
Query: 275 GNHARRPSLISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERV 314
P+ +SG G + WG NE G LG G+ +P V
Sbjct: 713 TTDRVTPAAVSGLSGVTALVAGANHTCALMPTGTVQCWGKNEFGQLGDGTTTDRLTPVAV 772
Query: 315 QGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 345
G S + ++ G +HT A+ + G WG
Sbjct: 773 SG---LSGITALAAGSEHTCAVLNTGAARCWG 801
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 121/300 (40%), Gaps = 39/300 (13%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
L R WG G+LG G+ R PV S + ALA G +HT L +TG V
Sbjct: 542 LDTRRVRCWGRNSSGQLGDGTRTDRVTPVAVSGLSGAT--ALAAGNSHTCTLLDTGTVQC 599
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG + P +SGL V ++ G +H+ A+ G + WG+NS+GQ
Sbjct: 600 WGWNSSGQLGDGTRTDR-VTPAAVSGLSG-VTALAAGANHTCALMDSGTVQCWGRNSSGQ 657
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + +V P V LSG+ A G + A+ G V WG SG+LG G
Sbjct: 658 LGDGTRTDRVTPA--AVSGLSGV--TALAAGANHTCALMDSGTVQCWGRNSSGQLGDGT- 712
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+T TP + L GV +A A H+ + G V +G ++
Sbjct: 713 --------TTDRVTPAAVSGLSGVTALVAGAN--HTCALMPTGTVQCWGKNEFGQLGDGT 762
Query: 275 GNHARRPSLISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERV 314
P +SG G WG N G LGI +D P V
Sbjct: 763 TTDRLTPVAVSGLSGITALAAGSEHTCAVLNTGAARCWGRNLFGRLGISPLDYSPLPRTV 822
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 166/412 (40%), Gaps = 77/412 (18%)
Query: 15 KQDIKLGSKL--GICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
K+ +KL L G+ WI ST G GRL ++ P+ S
Sbjct: 34 KRPVKLDRYLYPGVAHTWIDST-----------GSEGRLMTNPGKAPASPLPLS-----R 77
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
+ ALA G HT L TG V+ G N GQLG ++ P+ +SGL V ++ G
Sbjct: 78 VIALAAGRYHTCALLNTGTVWCWGWNGSGQLGDGTTTDRAM-PVAVSGLSG-VTALAAGR 135
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+H+ A+ G + WG NS+GQLG +V P+ V LSG+ A G + A+
Sbjct: 136 YHTCALLNTGTVQCWGLNSSGQLGDWTITNRVTPV--AVSGLSGVIALAA--GDRHTCAL 191
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
V WG G+LG G + +TP + L GV AAG H+
Sbjct: 192 LDTRTVRCWGENEHGQLGDGT---------TNDRWTPVAVSGLSGVTAL--AAGGRHTCA 240
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISG--------------------GELY 290
G V +G ++ +G R P +SG G +
Sbjct: 241 ALNTGTVQCWGGNGAGQL--GDGTRTSRLTPMAVSGLSGATALAAGFEHTCALLDTGTVR 298
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGS 349
WG N +G LG G+ + +P V G S V ++ G HT A+ + + + WG
Sbjct: 299 CWGLNSSGQLGDGTTERRLTPVAVSG---LSGVTALAAGDFHTCAVLQTETVQCWGL--- 352
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+S GQLG G + P V+ AL + G HT ALL+
Sbjct: 353 ---------NSSGQLGDGTTERRLTPVSVSGLSGSTAL--AAGGVHTCALLQ 393
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG ++G+LG G+ R PV S + ALA G HT + TG G N FG+
Sbjct: 750 WGKNEFGQLGDGTTTDRLTPVAVSGLS--GITALAAGSEHTCAVLNTGAARCWGRNLFGR 807
Query: 103 LGISENIGYSLEPLRISGLKKEVVQI 128
LGIS PL S L + VV I
Sbjct: 808 LGIS--------PLDYSPLPRTVVII 825
>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
Length = 1058
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 161/365 (44%), Gaps = 54/365 (14%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+LGLG +E P +++ +ACG HTLFLT TG VYA G ND+
Sbjct: 10 WGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDY 69
Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + PL I L+ V +QI G HS A++ G++ WG N GQLG
Sbjct: 70 SQLGHDLP---TKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHAT 126
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+++ +P V L Q A G S+A+T G++ SWG+ G+LG + +
Sbjct: 127 D-KEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL-- 183
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
T P + L G+ + A G HS I ++G V+ +G ++ + +
Sbjct: 184 ----THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRS 239
Query: 280 RPSLIS------------GGELYTWGSNENGCL------------GIGSIDVLHSPERVQ 315
P+ + G E + +NE G G S ++L R+
Sbjct: 240 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEML---PRMV 296
Query: 316 GPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
S + QV+CG +HT A+ S G++ +G G S GQLG + +
Sbjct: 297 MELMGSTITQVACGNRHTLALVPSRGRVYAFGLG------------SSGQLGTRSTKSLM 344
Query: 374 HPTIV 378
P +V
Sbjct: 345 LPQVV 349
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 120/276 (43%), Gaps = 49/276 (17%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P+++ +Q A G ++ +T GKV + G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ +LGH + P LI EL+ + G HS + + G+V +
Sbjct: 66 SNDYSQLGHDLPTK-----------RPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSW 114
Query: 263 GDR-------AVDKMLFQEGNHARR----------------PSLISGGELYTWGSNENGC 299
GD A DK + Q R+ +L S GELY+WGSN G
Sbjct: 115 GDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQ 174
Query: 300 LGIGSI-DVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 356
LG+ S D+ H P R+ P+ ++CG H+ IS+ + +GW
Sbjct: 175 LGVNSPNDLTHCNYPLRLTTLLG-IPLAAIACGGNHSFLISKSGAV-FGW---------- 222
Query: 357 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
G ++ GQLG ++ + +PT + + V+CG
Sbjct: 223 GRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACG 258
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 80/210 (38%), Gaps = 54/210 (25%)
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+ G ++ WG+ G+LG LG + TP I V+ A G H+
Sbjct: 1 MASGKELYCWGSTSHGQLG-------LGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTL 53
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSP 311
+ G+VY G ++ +RP LI + Y
Sbjct: 54 FLTATGKVYACGSNDYSQL--GHDLPTKRPLLIPELQDYV-------------------- 91
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+ Q+ CG +H+ A+S+ G++L+WG + GQLGH D
Sbjct: 92 -----------IIQICCGSRHSLALSDWGQVLSWG------------DNDCGQLGHATDK 128
Query: 371 DYIH-PTIVNFGENVKALQVSCGFNHTGAL 399
+ + P +V +Q++CG NH+ AL
Sbjct: 129 EIVQLPKVVRQLVTKTVVQIACGNNHSLAL 158
>gi|242091255|ref|XP_002441460.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
gi|241946745|gb|EES19890.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
Length = 1020
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 173/402 (43%), Gaps = 71/402 (17%)
Query: 14 LKQDIKLGSKLGIC-KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
L+ D+ L + C R I+ T ++ WG GRLG G+ RP + A +
Sbjct: 249 LESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSN 308
Query: 73 LKALACGGAHTLFLTETGCVYA--TGLNDFGQLGISENIGYSLEPLRISGLKK--EVVQI 128
++ +ACG HT +T +G +Y G + G LG + L P R+SG + +V+ +
Sbjct: 309 VEYIACGEFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWL-PKRVSGPLEGVQVLSV 367
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G HS+ T G+++ +G + G LG GK+ + + P +VE LSG T + A G
Sbjct: 368 SCGSWHSALTTSSGKVFTFGDGTFGALGHGKR--ETVGYPKEVEALSGFRTMKVACGLWH 425
Query: 189 SVAVTGGG----------KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
S A+ K+ +WGAG +LGHG + S L P ++ L
Sbjct: 426 SAAIVESSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRL---------VPTCVQSLIDY 476
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENG 298
A G HS I +L + G ++T GS+ NG
Sbjct: 477 SFHQVACG--HSMTI----------------------------ALSTSGHVFTMGSSSNG 506
Query: 299 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDG 357
LG D P VQ S V+++SCG H A + S ++ TWG G +
Sbjct: 507 QLGNPKSDG-KQPIPVQDRLSGELVEEISCGSCHVAVLTSRSEVYTWGMGAN-------- 557
Query: 358 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G+LGHG D PT+V ++ ++CG N T +
Sbjct: 558 ----GRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFTTCI 595
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 111/270 (41%), Gaps = 63/270 (23%)
Query: 142 GELYMWGK------NSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
G++Y+WG+ + G L KA +IP P + + + + +Q A G+ T
Sbjct: 215 GDVYVWGEVWTDVIPAEGSTNYLCSKADILIPKPLESDVVLDV--QQIACGYRHIALTTR 272
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G+V +WG GRLGHG ++ I P+L++ L V+ A G H+ +
Sbjct: 273 QGEVFAWGEELGGRLGHGTDADI---------SRPKLVEALAVSNVEYIACGEFHTCAV- 322
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSN--ENGCLGIGSIDVLHSPE 312
+ G+LYTWG G LG G+ P+
Sbjct: 323 -----------------------------TASGDLYTWGDGYYNVGLLGNGAGASHWLPK 353
Query: 313 RVQGPFSESPVDQVSCG-WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
RV GP V VSCG W S GK+ T+G GTF G LGHG
Sbjct: 354 RVSGPLEGVQVLSVSCGSWHSALTTSSGKVFTFG----DGTF--------GALGHGKRET 401
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+P V + ++V+CG H+ A++E
Sbjct: 402 VGYPKEVEALSGFRTMKVACGLWHSAAIVE 431
>gi|392347372|ref|XP_342701.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
norvegicus]
Length = 1185
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 122/249 (48%), Gaps = 18/249 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG S +S RP A + ++CG H++ + G V+ G GQL
Sbjct: 204 GDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQL 263
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E+ S P +I+ L +++Q+S G++HS A++ DG+++ WG N GQLGLG
Sbjct: 264 GIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLC 323
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P KV+ L GI Q A G S A++ G WG SG+L S+
Sbjct: 324 SQAS-PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSA------ 376
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
Y P I L+ + V + G+ H++ + E+G+V+ FG + +++ H+ R
Sbjct: 377 KEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQL-----QHSPRSG 431
Query: 281 ---PSLISG 286
P LI G
Sbjct: 432 RGGPQLIEG 440
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 134/278 (48%), Gaps = 47/278 (16%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
LKA A G H+L L VY+ G N GQLG ++ + P I L + +S G
Sbjct: 182 LKA-ASGERHSLLLFSNHRVYSCGDNSRGQLG-QKSPQSTKRPEPIQALSTVHIDLVSCG 239
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+ G ++ WG S GQLG+G ++ ++ +PTK+ L+GI Q + G S+A
Sbjct: 240 KEHSVAVCHQGRVFTWGAGSEGQLGIG-ESKEISFMPTKINSLAGIKIIQVSCGHYHSLA 298
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ G+V SWG+ G+LG G S+ +P+ +K LEG+ + AAG
Sbjct: 299 LSEDGQVFSWGSNRQGQLGLGN--------NLCSQASPQKVKSLEGIPLAQVAAG----- 345
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGI---GSIDVL 308
G H+ SL+ G + WG+N +G L + + + +
Sbjct: 346 -----------------------GTHSFALSLM--GTSFGWGNNRSGQLALSGNSAKEQI 380
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 345
+ P + G V +SCG++HT+ ++E G++ T+G
Sbjct: 381 YKPHSI-GALKTLNVVYISCGYEHTSVLTEDGQVFTFG 417
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 135/293 (46%), Gaps = 57/293 (19%)
Query: 114 EPLRI---SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
+P R+ +GLK +++ ++G HS + + +Y G NS GQLG +K+ + P
Sbjct: 169 QPRRLEAGTGLK--LLKAASGERHSLLLFSNHRVYSCGDNSRGQLG--QKSPQSTKRPEP 224
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
++ LS + + G E SVAV G+V +WGAG G+LG G+ I + P
Sbjct: 225 IQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEI--------SFMPT 276
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
I L G+K+ + G HS + E+G+V+
Sbjct: 277 KINSLAGIKIIQVSCGHYHSLALSEDGQVF------------------------------ 306
Query: 291 TWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 349
+WGSN G LG+G+ + SP++V+ P+ QV+ G H+ A+S ++GWG +
Sbjct: 307 SWGSNRQGQLGLGNNLCSQASPQKVKS-LEGIPLAQVAAGGTHSFALSLMGT-SFGWGNN 364
Query: 350 H-GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G + G+S+ Q+ P + + + + +SCG+ HT L E
Sbjct: 365 RSGQLALSGNSAKEQI--------YKPHSIGALKTLNVVYISCGYEHTSVLTE 409
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 3/176 (1%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G S E + P ++ + ++CG H+L L+E G V++ G N G
Sbjct: 255 WGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQG 314
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ N+ P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 315 QLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGN 374
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
A + I P + L + + G+E + +T G+V ++G S +L H S
Sbjct: 375 SAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRS 430
>gi|357520079|ref|XP_003630328.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524350|gb|AET04804.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 316
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 118/227 (51%), Gaps = 23/227 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG G+ G+LG G + R P SAF+ + ++ CG +T+ +++G VY+ G DFG
Sbjct: 73 WGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFG 132
Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG + + P+R + GL+ + QIS G H A+T++ ++ WG+N NG+LGLG
Sbjct: 133 RLGHGDPSDLFIPHPIRALQGLR--IKQISCGDCHCLAVTMENKVLSWGRNQNGELGLG- 189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K +P K+ GI K A G E SVA+T G + WG G G LG G +
Sbjct: 190 -TTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTND--- 245
Query: 220 FLRSTSEYTPRLIKE---LEGVKVKIAAAGFLHSACIDENGRVYIFG 263
RLI E ++G K+ + + G+ H+ I +G +Y G
Sbjct: 246 ----------RLIPEKVNIDGDKIVMVSCGWRHTISISSSGGLYTHG 282
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 128/291 (43%), Gaps = 59/291 (20%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDG-ELYMWGK 149
V + G + GQLG + L P ++S +++V ++ G ++ A + G ++Y WG
Sbjct: 70 VCSWGRGEDGQLGHGDT-DDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGW 128
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
G+LG G + IP P + L G+ KQ + G +AVT KVLSWG +G L
Sbjct: 129 GDFGRLGHGDPSDLFIPHP--IRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGEL 186
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
G G + + P+ I EG+++K+ AAG HS I E+G
Sbjct: 187 GLGT---------TKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDG------------ 225
Query: 270 MLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 329
+LY WG G LG+G + PE+V + VSCG
Sbjct: 226 ------------------DLYGWGWGRYGNLGLGDTNDRLIPEKVN--IDGDKIVMVSCG 265
Query: 330 WKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
W+HT +I S G + T GW S GQLGHG+ D + P V
Sbjct: 266 WRHTISISSSGGLYTHGW------------SKYGQLGHGDFEDCLVPRKVQ 304
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 117/266 (43%), Gaps = 58/266 (21%)
Query: 134 HSSAITVDGELYM-WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
++SA+ G + WG+ +GQLG G +++P TK+ G G + +VA
Sbjct: 59 NASAVNFPGNVVCSWGRGEDGQLGHGDTDDRLLP--TKLSAFDGQDIVSVTCGADYTVAR 116
Query: 193 TGGGK-VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+ GK V SWG G GRLGHG S + + P I+ L+G+++K + G H
Sbjct: 117 SKSGKDVYSWGWGDFGRLGHGDPSDL---------FIPHPIRALQGLRIKQISCGDCHCL 167
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSP 311
+ +V +WG N+NG LG+G+ H P
Sbjct: 168 AVTMENKVL------------------------------SWGRNQNGELGLGTTKDSHVP 197
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+++ F + V+ G +H+ AI+E G + WGWG G LG G+
Sbjct: 198 QKILA-FEGIRIKMVAAGAEHSVAITEDGDLYGWGWG------------RYGNLGLGDTN 244
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHT 396
D + P VN + K + VSCG+ HT
Sbjct: 245 DRLIPEKVNI-DGDKIVMVSCGWRHT 269
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G + P A + +K ++CG H L +T V + G N G+
Sbjct: 126 WGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGE 185
Query: 103 LGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG+ +++ + L G++ ++V + G HS AIT DG+LY WG G LGLG
Sbjct: 186 LGLGTTKDSHVPQKILAFEGIRIKMV--AAGAEHSVAITEDGDLYGWGWGRYGNLGLGDT 243
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++IP ++ G + G+ +++++ G + + G G+LGHG L
Sbjct: 244 NDRLIPEKVNID---GDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCL-V 299
Query: 221 LRSTSEYTPRLIKEL 235
R + +LI ++
Sbjct: 300 PRKVQALSDKLISQV 314
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 4/154 (2%)
Query: 31 ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
++ T++ + + WG G LGLG+ + P AFE +K +A G H++ +TE G
Sbjct: 167 LAVTMENKVLS-WGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDG 225
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
+Y G +G LG+ + L P +++ ++V +S G+ H+ +I+ G LY G +
Sbjct: 226 DLYGWGWGRYGNLGLGDT-NDRLIPEKVNIDGDKIVMVSCGWRHTISISSSGGLYTHGWS 284
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
GQLG G + +P KV+ LS Q L
Sbjct: 285 KYGQLGHGDFEDCL--VPRKVQALSDKLISQVIL 316
>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
Length = 4908
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 178/387 (45%), Gaps = 57/387 (14%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 4050 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4107
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ + +++ P + L+ V+ +++G H A+T +GE+Y WG+ +G+LG
Sbjct: 4108 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4166
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 4167 GNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4220
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4221 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4275
Query: 276 NHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + P +L G +YTWG + LG GS+D + P++
Sbjct: 4276 DGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKK 4335
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V + ++ G H A S+ G++ TW G + GQLG G
Sbjct: 4336 VAA-LQGKKIISIATGSLHCVACSDSGEVYTW------------GDNDEGQLGDGTVTAI 4382
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGAL 399
P +V + ++V+CG HT AL
Sbjct: 4383 QRPRLVAALQGKHIVKVTCGSAHTLAL 4409
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 137/295 (46%), Gaps = 44/295 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 3094 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3153
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
LG +N+ L ++ + VVQ++ G + A+T DG ++ WG G+LG G
Sbjct: 3154 LGHGDNVTQLKPKLVVALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGS 3213
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3214 EGS--DTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV--- 3268
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P+ I L G +V A G LH C+
Sbjct: 3269 ------RKPQPIGGLRGRRVIHVAVGALH--CL--------------------------- 3293
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
++ G++Y WG N++G G G+ V P V G V++V+CG H+ A
Sbjct: 3294 -AVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG-LDAVFVNRVACGSSHSIA 3346
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 134/303 (44%), Gaps = 48/303 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + S+ +ACG AH+ +T +G V G +G+
Sbjct: 4156 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4215
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4216 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4273
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4274 -GSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4330
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P+ + L+G K+ A G LH AC D
Sbjct: 4331 -------RRPKKVAALQGKKIISIATGSLHCVACSD------------------------ 4359
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
GE+YTWG N+ G LG G++ + P R+ + +V+CG HT A+S
Sbjct: 4360 -------SGEVYTWGDNDEGQLGDGTVTAIQRP-RLVAALQGKHIVKVTCGSAHTLALST 4411
Query: 339 GKI 341
++
Sbjct: 4412 SQL 4414
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 149/351 (42%), Gaps = 79/351 (22%)
Query: 92 VYATGLNDFGQLG-----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
V GLND QLG S+ I L P+ I+G K + +S
Sbjct: 2985 VMVWGLNDKEQLGGLKGSKVKVPTFSQTIS-RLRPIHIAGGSKSLFIVSQ---------- 3033
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
DG++Y G+ +NG+LGLG +P+P ++ L K+ A+ G + ++A+T GKV
Sbjct: 3034 DGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3091
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG +++ PRL++ L K++ A G HSA I G
Sbjct: 3092 FSWGEGEDGKLGHGNRTTL---------DKPRLVEALRAKKIRDVACGSSHSAAISSQGE 3142
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLI------------------------SGGELYTWGS 294
+Y +G ++ + +P L+ G +++WG
Sbjct: 3143 LYTWGLGEYGRLGHGDNVTQLKPKLVVALAGRRVVQVACGSRDAQTLALTEDGAVFSWGD 3202
Query: 295 NENGCLGIG---SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 350
+ G LG G D H ER+ G V Q+ CG + + A++ G++ TWG G +
Sbjct: 3203 GDFGKLGRGGSEGSDTPHEIERLSG----IGVVQIECGAQFSLALTRAGEVWTWGKGDYY 3258
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHG D P + + + V+ G H A+ +
Sbjct: 3259 ------------RLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTD 3297
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 158/349 (45%), Gaps = 54/349 (15%)
Query: 79 GGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF+ ++ G VYA G G+LG+ L P ++ L + VV+ + +G H
Sbjct: 3023 GGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 3081
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+T+DG+++ WG+ +G+LG G + + P VE L + A G S A++
Sbjct: 3082 ALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVEALRAKKIRDVACGSSHSAAISS 3139
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG + ++ P+L+ L G +V A G +
Sbjct: 3140 QGELYTWGLGEYGRLGHGD---------NVTQLKPKLVVALAGRRVVQVACGSRDAQTLA 3190
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRP----------------------SLISGGELY 290
+ E+G V+ +GD K+ + P +L GE++
Sbjct: 3191 LTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVW 3250
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG G + P+ + G V V+ G H A+++ G++ WG
Sbjct: 3251 TWGKGDYYRLGHGGDQHVRKPQPIGG-LRGRRVIHVAVGALHCLAVTDAGQVYAWG---- 3305
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G GN P +V + V +V+CG +H+ A
Sbjct: 3306 -----DNDH---GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3346
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDF 100
WG G Y RLG G+ + R P + A H + AL G AH+L LT G V+A G D+
Sbjct: 689 WGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDY 748
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + N SL+P+ + L + V ++ G S A++ +G+LY WGK + L ++
Sbjct: 749 GKLG-NGNCNGSLQPILVESLPR-VQRVFAGSQFSLALSSEGQLYSWGKATCLGHQLVER 806
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ + +P V L A+ +A++ G+V WG S ++ SS
Sbjct: 807 SVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPASVSS 862
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 15/224 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ RLG G +R P +A E+H ++++ CG +++ +T G + G + +
Sbjct: 637 WGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYAR 696
Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + SL L ++ VV ++ +G HS A+T +G ++ WG G+LG G
Sbjct: 697 LGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNC 756
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILG 219
+ PI VE L + ++ G + S+A++ G++ SWG LGH E S+ G
Sbjct: 757 NGSLQPI--LVESLPRV--QRVFAGSQFSLALSSEGQLYSWGKATC--LGHQLVERSVQG 810
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
PRL+ L+ ++ A H + +G V+ +G
Sbjct: 811 C------SVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWG 848
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 124/335 (37%), Gaps = 105/335 (31%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG------------------ 185
+Y WG N GQLG G + ++ I PT E LS + Q A G
Sbjct: 4047 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4104
Query: 186 --------------------------FEQSVAVTGGGK----------VLSWGAGGSGRL 209
F + VAV GGK V +WG G G+L
Sbjct: 4105 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 4164
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S P+L++ L G+ V A G HSA I +G V +G +
Sbjct: 4165 GHGNRMSY---------DRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4215
Query: 270 MLFQEGNHARRPSLISG------------------------GELYTWGSNENGCLGIGSI 305
+ + RP L+ +++WG + G LG G
Sbjct: 4216 LGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4275
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 364
D P +++ + V +V CG + + A+++ G + TWG G H +L
Sbjct: 4276 DGCKLPYKIES-LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFH------------RL 4322
Query: 365 GHGNDVDYI-HPTIVNFGENVKALQVSCGFNHTGA 398
GHG+ VD++ P V + K + ++ G H A
Sbjct: 4323 GHGS-VDHVRRPKKVAALQGKKIISIATGSLHCVA 4356
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWGWGG 348
Y+WG+ E+ LG G P ++ + V V CG ++AAI+ G +LTWG
Sbjct: 635 YSWGTGEDHRLGHGDTHARAVPTKIAA-LEQHCVQSVYCGCSYSAAITCGGNLLTWG--- 690
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
GT++ +LGHGN D PT+V
Sbjct: 691 -RGTYA--------RLGHGNSDDRSLPTLV 711
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 97/248 (39%), Gaps = 49/248 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
++ Q++ ++ +G+LY W L K A+ +P+ E +F A
Sbjct: 570 QIKQVACCETQMLILSQEGKLYTWR--------LAKPEAEPLPME---EVAHEVFISIAG 618
Query: 184 -LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
+A+ SWG G RLGHG + + P I LE V+
Sbjct: 619 HCEGRHFLAIDSNHNAYSWGTGEDHRLGHGD---------THARAVPTKIAALEQHCVQS 669
Query: 243 AAAGFLHSACIDENGRVYIFG-------------DRAVDKMLFQEGNH-----------A 278
G +SA I G + +G DR++ ++ +H A
Sbjct: 670 VYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDA 729
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-S 337
+L S G ++ WG + G LG G+ + P V+ S V +V G + + A+ S
Sbjct: 730 HSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVE---SLPRVQRVFAGSQFSLALSS 786
Query: 338 EGKILTWG 345
EG++ +WG
Sbjct: 787 EGQLYSWG 794
>gi|442319627|ref|YP_007359648.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441487269|gb|AGC43964.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1096
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 167/377 (44%), Gaps = 54/377 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +YG+LG GS +R P+ + S+ A+ G H+L L G V++ G N GQ
Sbjct: 71 WGGNNYGQLGTGS--TRQNPMPARVWRLFSITAIGAGELHSLALKSDGTVWSWGANTNGQ 128
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I S+ P + GL VV I+ G+ HS + DG ++ WG N+ GQLG G
Sbjct: 129 LGDGTLISRSV-PAPVPGLTN-VVAIAAGFSHSMVLKADGTVWAWGLNAAGQLGDGTPTR 186
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V L+G+ K A G S+A+T G++ +WG G+LG G ++G R
Sbjct: 187 RLTPV--QVLGLTGV--KDIAAGNVHSLALTADGRLWTWGGNVDGQLGTGD---LVG--R 237
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
ST+ P + V + G HS + +G V+ +G ++ P+
Sbjct: 238 STAAALPGM------TGVVALSGGGSHSLILKMDGSVWSWGKNDAGQLGLGSVVSTPTPT 291
Query: 283 LISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
+ G G ++ WGSN LG G+ SP +V G
Sbjct: 292 QVPGLTEMVAVTGGGQHSVALRVDGTVWAWGSNARAQLGDGTQTQRLSPCQVTGLTQVKG 351
Query: 323 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 382
V + G H+ A+ +G W W G +S GQ+G G + + PT
Sbjct: 352 V--AAGGGLHSVAV-KGNGEVWAW----------GSNSEGQVGDGTYLMKLVPTTARV-- 396
Query: 383 NVKALQVSCGFNHTGAL 399
V+ VS G HT AL
Sbjct: 397 LVERADVSAGGGHTLAL 413
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 149/334 (44%), Gaps = 53/334 (15%)
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
H+L L G V++ G N++GQLG + P R+ L + I G HS A+ D
Sbjct: 58 HSLVLKADGTVWSWGGNNYGQLGTGSTRQNPM-PARVWRLF-SITAIGAGELHSLALKSD 115
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G ++ WG N+NGQLG G ++ +P P V L+ + A GF S+ + G V +W
Sbjct: 116 GTVWSWGANTNGQLGDGTLISRSVPAP--VPGLTNVVAIAA--GFSHSMVLKADGTVWAW 171
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G +G+LG G T TP + L G VK AAG +HS + +GR++
Sbjct: 172 GLNAAGQLGDGTP---------TRRLTPVQVLGLTG--VKDIAAGNVHSLALTADGRLWT 220
Query: 262 FGDRAVDKM----LFQEGNHARRPSL-----ISG-----------GELYTWGSNENGCLG 301
+G ++ L A P + +SG G +++WG N+ G LG
Sbjct: 221 WGGNVDGQLGTGDLVGRSTAAALPGMTGVVALSGGGSHSLILKMDGSVWSWGKNDAGQLG 280
Query: 302 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 360
+GS+ +P +V G +E + V+ G +H+ A+ +G + W G ++
Sbjct: 281 LGSVVSTPTPTQVPG-LTE--MVAVTGGGQHSVALRVDGTVWAW------------GSNA 325
Query: 361 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
QLG G + P V VK + G +
Sbjct: 326 RAQLGDGTQTQRLSPCQVTGLTQVKGVAAGGGLH 359
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 171/382 (44%), Gaps = 63/382 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACGGAHTLFLTETGCVYATGLND 99
WG+ G+LG G++ P + F +L+ +LA GG H+L L G V+ G D
Sbjct: 522 WGDNSLGQLGDGTVT----PTRNAPFRVPNLEGVVSLAAGGEHSLALKADGTVWVWGRQD 577
Query: 100 FGQLGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
EN+G L P ++ GL + V + G HS + DG L+ WG+N+ GQL G
Sbjct: 578 --TCADPENVGRVLRVPEQVQGLT-DAVAVRAGRCHSVVLRADGTLWAWGRNAEGQLADG 634
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P +V+ L+G+ + ++G EQ++A+ G +WG G+LG G L
Sbjct: 635 TFTDRM--TPARVDGLTGVISF--SVGSEQTLALKADGTAWAWGPNAQGQLGGG-----L 685
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF--------GDRAVD-- 268
R+ P L V+ A G +H+ + ++ ++ + GD A+D
Sbjct: 686 SVPRTRPTQVPTL------TDVRTVAMGAVHALVLKDDLTLWAWGSNAEGQVGDGALDWQ 739
Query: 269 KMLFQEGNHARRP---------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
+ G A R + G + + G+N +G LG G++ P V G S
Sbjct: 740 AAPVRSGLAASRGLAAATQYSLGIALDGSVQSTGANASGQLGDGTLFPRAEPVPVIG-LS 798
Query: 320 ESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
E ++ G H A+ ++G++L+W G ++ G+LG G V P +V
Sbjct: 799 E--CRAIAGGATHGLALKTDGRVLSW------------GANAEGELGDGTTVARRAPAVV 844
Query: 379 NFGENVKALQVSCGFNHTGALL 400
G L ++ G H+ ALL
Sbjct: 845 --GPLAGVLSIAVGARHSLALL 864
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 142/325 (43%), Gaps = 43/325 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LGLGS+ S P + + A+ GG H++ L G V+A G N Q
Sbjct: 271 WGKNDAGQLGLGSVVSTPTPTQVPGLTE--MVAVTGGGQHSVALRVDGTVWAWGSNARAQ 328
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P +++GL + + G HS A+ +GE++ WG NS GQ+G G
Sbjct: 329 LGDGTQT-QRLSPCQVTGLTQVKGVAAGGGLHSVAVKGNGEVWAWGSNSEGQVGDGTYLM 387
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K++P +V + + G ++A+ G WG +LG G
Sbjct: 388 KLVPTTARVL----VERADVSAGGGHTLALKPDGTAWGWGLNAQSQLGDG---------- 433
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T+ P ++ L +V +AG HS + E+G V+ +G + + +P
Sbjct: 434 -TTTARPLPVQVLNLTRVAAVSAGTYHSLALKEDGTVWGWGANYWGAIGDGTALNRSQPV 492
Query: 283 LISG--------------------GELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSES 321
+SG G ++ WG N G LG G++ ++P RV P E
Sbjct: 493 KVSGTLVAMTVASGNFHSLALSVDGSVWAWGDNSLGQLGDGTVTPTRNAPFRV--PNLEG 550
Query: 322 PVDQVSCGWKHTAAI-SEGKILTWG 345
V ++ G +H+ A+ ++G + WG
Sbjct: 551 VV-SLAAGGEHSLALKADGTVWVWG 574
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 126/272 (46%), Gaps = 48/272 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ SR PV + A+A G +L L G V+A G N GQ
Sbjct: 872 WGSNIQGQLGDGTTVSRVLPVRVQGLT--GVAAIAAGDGFSLALKHDGTVWAWGGNTLGQ 929
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + SL P+R L V ++ G +HS A+ DG L+ WG N+ G+LG G +A
Sbjct: 930 LGDNTTL-RSLVPVRTQALTG-VTAVAAGRNHSLALKGDGTLWAWGSNTYGELGDGTQAR 987
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K+ P+ +V L+G+ A G S+AVT GGKV WG G++G G ++
Sbjct: 988 KLAPV--QVTSLTGVSALDA--GDHHSLAVTSGGKVWGWGRNQFGQVGKG--------VK 1035
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
S + P ++ G+ +A AG G H+ +
Sbjct: 1036 SNWQLLP---AQVPGLTSAVAVAG---------------------------GGEHSL--A 1063
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
L+S ++ WG + G LG G ++ SP +V
Sbjct: 1064 LLSDRSVWAWGHGDMGQLGTGMSNLRLSPVQV 1095
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 151/353 (42%), Gaps = 58/353 (16%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
G+LG G+L R PV + +A+A G H L L G V + G N G+LG
Sbjct: 778 GQLGDGTLFPRAEPVPVIGLSE--CRAIAGGATHGLALKTDGRVLSWGANAEGELGDGTT 835
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
+ + G V+ I+ G HS A+ DG + WG N GQLG G ++V+P+
Sbjct: 836 VARRAPA--VVGPLAGVLSIAVGARHSLALLGDGSVQAWGSNIQGQLGDGTTVSRVLPV- 892
Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
+V+ L+G+ A GF S+A+ G V +WG G+LG LRS
Sbjct: 893 -RVQGLTGVAAIAAGDGF--SLALKHDGTVWAWGGNTLGQLGDNTT------LRS---LV 940
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--P----- 281
P + L GV AAG HS + +G ++ +G ++ +G AR+ P
Sbjct: 941 PVRTQALTGVTA--VAAGRNHSLALKGDGTLWAWGSNTYGEL--GDGTQARKLAPVQVTS 996
Query: 282 ---------------SLISGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQ 325
++ SGG+++ WG N+ G +G G P +V G S
Sbjct: 997 LTGVSALDAGDHHSLAVTSGGKVWGWGRNQFGQVGKGVKSNWQLLPAQVPGLTSAV---A 1053
Query: 326 VSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
V+ G +H+ A+ + + W W GH GQLG G + P V
Sbjct: 1054 VAGGGEHSLALLSDRSV-WAW----------GHGDMGQLGTGMSNLRLSPVQV 1095
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 142/331 (42%), Gaps = 34/331 (10%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
A+ G H++ L G ++A G N GQL + P R+ GL V+ S G
Sbjct: 603 AVRAGRCHSVVLRADGTLWAWGRNAEGQLA-DGTFTDRMTPARVDGLTG-VISFSVGSEQ 660
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+ DG + WG N+ GQLG G + P T+V L+ + T A+G ++ +
Sbjct: 661 TLALKADGTAWAWGPNAQGQLGGGLSVPRTRP--TQVPTLTDVRT--VAMGAVHALVLKD 716
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+ +WG+ G++G G +RS + L + + IA G + S +
Sbjct: 717 DLTLWAWGSNAEGQVGDGALDWQAAPVRSGLAASRGLAAATQ-YSLGIALDGSVQSTGAN 775
Query: 255 ENGRV---YIFGDRA--VDKMLFQE-----GNHARRPSLISGGELYTWGSNENGCLGIGS 304
+G++ +F RA V + E G +L + G + +WG+N G LG G+
Sbjct: 776 ASGQLGDGTLF-PRAEPVPVIGLSECRAIAGGATHGLALKTDGRVLSWGANAEGELGDGT 834
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+P V GP + V ++ G +H+ A+ +G + WG + GQ
Sbjct: 835 TVARRAPA-VVGPLAG--VLSIAVGARHSLALLGDGSVQAWG------------SNIQGQ 879
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
LG G V + P V V A+ GF+
Sbjct: 880 LGDGTTVSRVLPVRVQGLTGVAAIAAGDGFS 910
>gi|325180310|emb|CCA14713.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 393
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 143/325 (44%), Gaps = 54/325 (16%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD 141
T+F TG G F + GI + L P + + K + ++ G HS+AI +
Sbjct: 6 TVFTWGTGTQGQLGHGSFEKTGIRSSY-EELSPRILETFEGKNIAKLDFGATHSAAIDKE 64
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G+LY WG N QLG G + IP V+ L GI + G + AV GK+ +W
Sbjct: 65 GKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTGAVDEEGKLFTW 124
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRV 259
G GGS G G LG E PRL++ L +GV VK G LH+ + ++
Sbjct: 125 GWGGSTMKGSGA----LGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKD--- 177
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
GE++ WG+ E G LG G+ D PE V+ F+
Sbjct: 178 ---------------------------GEIWAWGNGEYGRLGNGASDNFEVPEPVE-YFA 209
Query: 320 ESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH---- 374
+ + +S G T AI+E G++ +WG + HS G LG G VDY +
Sbjct: 210 DENIASISAGRDFTFAITEHGEVYSWGI---------NSHSQLG-LGGGLTVDYYNMETI 259
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V NV QVS G++H A+
Sbjct: 260 PVVVEALSNVNVAQVSAGYDHAAAV 284
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 162/407 (39%), Gaps = 89/407 (21%)
Query: 43 WGNGDYGRLGLGSLE--------SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
WG G G+LG GS E P + FE ++ L G H+ + + G +Y
Sbjct: 10 WGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAAIDKEGKLYT 69
Query: 95 TGLNDFGQLGI-SENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMW---GK 149
G N++ QLG S N P + L+ ++V IS G +H+ A+ +G+L+ W G
Sbjct: 70 WGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTGAVDEEGKLFTWGWGGS 129
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECL--SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G LG + IP V L G+ K G +VA+T G++ +WG G G
Sbjct: 130 TMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKDGEIWAWGNGEYG 189
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLG+G + P ++ + +A GR + F
Sbjct: 190 RLGNGASDNF---------EVPEPVEYFADENIASISA-----------GRDFTF----- 224
Query: 268 DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG---SIDV--LHSPERVQGPFSESP 322
++ GE+Y+WG N + LG+G ++D + + V S
Sbjct: 225 --------------AITEHGEVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVN 270
Query: 323 VDQVSCGWKHTAAIS-EGKILTWG---WGGSH---------------GTFSEDGHSSGGQ 363
V QVS G+ H AA++ +GK+ WG W H G + S+ G
Sbjct: 271 VAQVSAGYDHAAAVTNDGKMFMWGAKLWLEPHEMTILKDETIISVQCGRYYTAALSASGN 330
Query: 364 -----------LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LGHG + P +V + ++CG++H GAL
Sbjct: 331 LFTFGKGHSNCLGHGERKTQLQPLLVESLNRYNVVSMTCGYSHMGAL 377
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 95/254 (37%), Gaps = 80/254 (31%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V +WG G G+LGHG G S E +PR+++ EG + G HSA ID+ G
Sbjct: 7 VFTWGTGTQGQLGHGSFEKT-GIRSSYEELSPRILETFEGKNIAKLDFGATHSAAIDKEG 65
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDV-LHSPERVQG 316
+ LYTWGSNE LG GS + + S RV
Sbjct: 66 K------------------------------LYTWGSNEYHQLGHGSSNQDIQSIPRVVD 95
Query: 317 PFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFS--------ED----------- 356
+ +SCG HT A+ E GK+ TWGWGGS S ED
Sbjct: 96 ALRGIKIVDISCGEYHTGAVDEEGKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLV 155
Query: 357 ----------------------------GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 388
G+ G+LG+G ++ P V + +
Sbjct: 156 DQGVPVKSVECGELHTVALTKDGEIWAWGNGEYGRLGNGASDNFEVPEPVEYFADENIAS 215
Query: 389 VSCGFNHTGALLEY 402
+S G + T A+ E+
Sbjct: 216 ISAGRDFTFAITEH 229
>gi|449268693|gb|EMC79542.1| X-linked retinitis pigmentosa GTPase regulator, partial [Columba
livia]
Length = 719
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 155/356 (43%), Gaps = 55/356 (15%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + K CG HTL TE G VYA G N G
Sbjct: 53 MFGSNNWGQLGLGSKNTVSKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGGNSEG 112
Query: 102 QLGISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + S + + ++ Q++ G + S+A+T DG+L++WG NS GQ+GL +
Sbjct: 113 QLGLGDTEERSTFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADE 172
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A +P V G + G+ S +TG G++ ++G +G+LG
Sbjct: 173 ACVSVPCQVDV----GKPVSSISCGYYHSALITGDGELYTFGEPENGKLG---------- 218
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
L ++L+ +V G + +V G+ V
Sbjct: 219 ---------LLPEQLKNNRVPQPVPGIMEKV-----NKVACGGEHTV------------- 251
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-G 339
+++ ++YT+G + G LG G+ S + + ++CG HTA ++E G
Sbjct: 252 --VLTETDVYTFGLGQYGQLGHGTFIFETSVPKSVKHLRRHKICNITCGENHTAVVAENG 309
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
+ T+G G HG LG N + PT+ L V+CG H
Sbjct: 310 LMFTFG-DGRHGKLG---------LGEENYTNQFDPTLCYNFLRFTVLLVACGGCH 355
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 157/341 (46%), Gaps = 57/341 (16%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE 143
L + E+G V+ FG+ +E+I P + + V IS G H++ +T +G+
Sbjct: 1 LCVLESGAVFT-----FGKSRFAEDI-----PSKFWFKNDKPVLISCGDEHTAIVTGNGK 50
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
LYM+G N+ GQLGLG K + PT V+ L TK A G ++ T G V + G
Sbjct: 51 LYMFGSNNWGQLGLGSK--NTVSKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGG 108
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LG G RST + K+K AAG SA + E+G+++++G
Sbjct: 109 NSEGQLGLGDTEE-----RSTFHLISFFTNQH---KIKQLAAGSYTSAAVTEDGQLFVWG 160
Query: 264 DRAVDKMLFQEGNHARRP-------------------SLISG-GELYTWGSNENGCLGIG 303
D + ++ + P +LI+G GELYT+G ENG LG+
Sbjct: 161 DNSEGQIGLADEACVSVPCQVDVGKPVSSISCGYYHSALITGDGELYTFGEPENGKLGLL 220
Query: 304 SIDVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSG 361
+ ++ P+ V G + V++V+CG +HT ++E + T+G G
Sbjct: 221 PEQLKNNRVPQPVPGIMEK--VNKVACGGEHTVVLTETDVYTFGLG------------QY 266
Query: 362 GQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GQLGHG + + P V K ++CG NHT + E
Sbjct: 267 GQLGHGTFIFETSVPKSVKHLRRHKICNITCGENHTAVVAE 307
>gi|395859036|ref|XP_003801852.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Otolemur garnettii]
Length = 531
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 140/301 (46%), Gaps = 49/301 (16%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
TP V++AA LHS C+++ + G +A +L
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ----IVCG-------------YAHTLALTDE 251
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTW 344
G LY WG+N G LG G+ + L SP + E V+ +C HT+A G + W
Sbjct: 252 GLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERIVEIAACHSAHTSAAKTQGGHVYMW 310
Query: 345 G 345
G
Sbjct: 311 G 311
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 115/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL- 274
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+P I + V+IAA H SA + G VY++G
Sbjct: 275 --------SPAHIMVEKERIVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 136/312 (43%), Gaps = 51/312 (16%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + +T E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSASEALYVTDSDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V A G HS + +G V+ +G ++ G+ A +P+
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV S V+Q+
Sbjct: 180 IKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG ++ GQLG GN + + P + +
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHIMVEKERIV 287
Query: 387 LQVSCGFNHTGA 398
+C HT A
Sbjct: 288 EIAACHSAHTSA 299
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ +V+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERIVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 317 -SVVLPHLTHFSCTDDVF 333
>gi|356554129|ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max]
Length = 1106
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 168/367 (45%), Gaps = 67/367 (18%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQ-IS 129
++ +ACGG H +T+ G V++ G G+L G+ ++ L P I L ++ ++
Sbjct: 311 VQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDV---LHPKLIEALSNTNIELVA 367
Query: 130 TGYHHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
G +HS A+T+ G+LY WG + G LG G + + +P +V L GI + G
Sbjct: 368 CGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHW--VPKRVNGPLEGIHVSYISCGP 425
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+ VT G++ ++G G G LGHG S+ PR ++ L+G++ AA G
Sbjct: 426 WHTAVVTSAGQLFTFGDGTFGALGHGDRKSV---------SLPREVESLKGLRTVRAACG 476
Query: 247 FLHSACIDE----------NGRVYIF----GDRA----VDK--------MLFQEGN---- 276
H+A + E V +F GD+ VDK + E N
Sbjct: 477 VWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVPTCVALAEHNVCQV 536
Query: 277 ---HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 333
H+ +L + G +YT GS G LG D P V+G SES V++++CG H
Sbjct: 537 ACGHSLTVALTTSGRVYTMGSPVYGQLGNPQADG-KLPILVEGKLSESFVEEIACGAYHV 595
Query: 334 AAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
A + S ++ TWG G + G+LGHG+ D PT+V ++ ++CG
Sbjct: 596 AVLTSRTEVYTWGKGAN------------GRLGHGDTDDRNTPTLVEALKDKDVKSIACG 643
Query: 393 FNHTGAL 399
T A+
Sbjct: 644 TTFTAAI 650
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 118/275 (42%), Gaps = 66/275 (24%)
Query: 142 GELYMWGKNS--------NGQLG--LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
G++++WG+ + N ++G LG K + P +E + + A G +
Sbjct: 266 GDVFIWGEGTGDGVLGGGNHRVGSCLGAKMDSLFP--KALESAVVLDVQNIACGGRHAAL 323
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
VT G+V SWG GRLGHG +S +L P+LI+ L +++ A G HS
Sbjct: 324 VTKQGEVFSWGEESGGRLGHGVDSDVL---------HPKLIEALSNTNIELVACGEYHSC 374
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSN--ENGCLGIGSIDVLH 309
+ G+LYTWG+ G LG G+
Sbjct: 375 AV------------------------------TLSGDLYTWGNGTYNYGLLGHGNQVSHW 404
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
P+RV GP V +SCG HTA + S G++ T+G GTF G LGHG+
Sbjct: 405 VPKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFG----DGTF--------GALGHGD 452
Query: 369 DVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
P V + ++ ++ +CG HT A++E +
Sbjct: 453 RKSVSLPREVESLKGLRTVRAACGVWHTAAVVEVM 487
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG E++ P C A +H++ +ACG + T+ LT +G VY G +GQ
Sbjct: 504 WGDGDKGRLGHVDKEAKLVPT-CVALAEHNVCQVACGHSLTVALTTSGRVYTMGSPVYGQ 562
Query: 103 LGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + G P+ + G E V +I+ G +H + +T E+Y WGK +NG+LG G
Sbjct: 563 LGNPQADGKL--PILVEGKLSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDT 620
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ PT VE L K A G + A+
Sbjct: 621 DDR--NTPTLVEALKDKDVKSIACGTTFTAAI 650
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 105/276 (38%), Gaps = 75/276 (27%)
Query: 43 WGNG--DYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WGNG +YG LG G+ S W P V E + ++CG HT +T G ++ G
Sbjct: 385 WGNGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGT 444
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAIT------------VDGELYM 146
FG LG + SL P + LK V+ + G H++A+ +L+
Sbjct: 445 FGALGHGDRKSVSL-PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSVDLFT 503
Query: 147 WGKNSNGQLGLGKKAAKVIP---------------------------------------- 166
WG G+LG K AK++P
Sbjct: 504 WGDGDKGRLGHVDKEAKLVPTCVALAEHNVCQVACGHSLTVALTTSGRVYTMGSPVYGQL 563
Query: 167 --------IPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+P VE LS F ++ A G +T +V +WG G +GRLGHG
Sbjct: 564 GNPQADGKLPILVEGKLSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGD---- 619
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
+ TP L++ L+ VK A G +A I
Sbjct: 620 -----TDDRNTPTLVEALKDKDVKSIACGTTFTAAI 650
>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
Length = 1058
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 161/365 (44%), Gaps = 54/365 (14%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+LGLG +E P +++ +ACG HTLFLT TG VYA G ND+
Sbjct: 10 WGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDY 69
Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + PL I L+ V +QI G HS A++ G++ WG N GQLG
Sbjct: 70 SQLGHDLP---TKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHAT 126
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+++ +P V L Q A G S+A+T G++ SWG+ G+LG + +
Sbjct: 127 D-KEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL-- 183
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
T P + L G+ + A G HS I ++G V+ +G ++ + +
Sbjct: 184 ----THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRS 239
Query: 280 RPSLIS------------GGELYTWGSNENGCL------------GIGSIDVLHSPERVQ 315
P+ + G E + +NE G G S ++L R+
Sbjct: 240 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEML---PRMV 296
Query: 316 GPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
S + QV+CG +HT A+ S G++ +G G S GQLG + +
Sbjct: 297 MELMGSTITQVACGNRHTLALVPSRGRVYAFGLG------------SSGQLGTRSTKSLM 344
Query: 374 HPTIV 378
P +V
Sbjct: 345 LPQVV 349
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 120/276 (43%), Gaps = 49/276 (17%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P+++ +Q A G ++ +T GKV + G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ +LGH + P LI EL+ + G HS + + G+V +
Sbjct: 66 SNDYSQLGHDLPTK-----------RPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSW 114
Query: 263 GDR-------AVDKMLFQEGNHARR----------------PSLISGGELYTWGSNENGC 299
GD A DK + Q R+ +L S GELY+WGSN G
Sbjct: 115 GDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQ 174
Query: 300 LGIGSI-DVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 356
LG+ S D+ H P R+ P+ ++CG H+ IS+ + +GW
Sbjct: 175 LGVNSPNDLTHCNYPLRLTTLLG-IPLAAIACGGNHSFLISKSGAV-FGW---------- 222
Query: 357 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
G ++ GQLG ++ + +PT + + V+CG
Sbjct: 223 GRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACG 258
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 80/210 (38%), Gaps = 54/210 (25%)
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+ G ++ WG+ G+LG LG + TP I V+ A G H+
Sbjct: 1 MASGKELYCWGSTSHGQLG-------LGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTL 53
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSP 311
+ G+VY G ++ +RP LI + Y
Sbjct: 54 FLTATGKVYACGSNDYSQL--GHDLPTKRPLLIPELQDYV-------------------- 91
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+ Q+ CG +H+ A+S+ G++L+WG + GQLGH D
Sbjct: 92 -----------IIQICCGSRHSLALSDWGQVLSWG------------DNDCGQLGHATDK 128
Query: 371 DYIH-PTIVNFGENVKALQVSCGFNHTGAL 399
+ + P +V +Q++CG NH+ AL
Sbjct: 129 EIVQLPKVVRQLVTKTVVQIACGNNHSLAL 158
>gi|74219054|dbj|BAE26671.1| unnamed protein product [Mus musculus]
Length = 464
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 176/411 (42%), Gaps = 79/411 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG E + P S F + +K++ GG H+ +T+ G ++ GLN G
Sbjct: 20 WGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLNKDG 79
Query: 102 QLGISENIGYSLEPLRISGLKK----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG +G++ E LR + K + Q++ G+ + +T G++ G N+ GQLG+
Sbjct: 80 QLG----LGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGV 135
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSG-RLGHGQE 214
K + +P +ECL AA G ++A T G V WG G SG RL GQ
Sbjct: 136 PHGPRKCV-VPQAIECLREKVVCVAA-GLRHALATTATGSVFQWGTGLASSGRRLCPGQN 193
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--------DRA 266
+ FL + P + LE A AG HSA + + G +Y++G RA
Sbjct: 194 LPL--FLTAKE---PSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLASRA 248
Query: 267 VDKMLFQ--EGNHARRPSLIS-------------GGELYTWGSNENGCLGIGSIDVLHSP 311
V L Q E ++ + + + G+++TWG + G LG L P
Sbjct: 249 VFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLG----RRLEPP 304
Query: 312 E-----------RVQGPFSESP--------VDQVSCGWKHTAAISEGKILTWGWGGSHGT 352
E QGP + P ++SCG +H A+ K +WGW
Sbjct: 305 EAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIRDKCCSWGW------ 358
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGALLE 401
+ G G G + + PT V + L V CG H+ A+ +
Sbjct: 359 ------NEHGMCGDGTESNVWTPTPVQALPPSPSRLLLVGCGAGHSLAVCQ 403
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 135/289 (46%), Gaps = 50/289 (17%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGK 149
++A G N +GQLG+ L P ++S + + ++ G HS+ +T G+L++ G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVFL-PQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGL 75
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N +GQLGLG +V+ T + L G +Q A G++ ++ +T G+VLS G+ G+L
Sbjct: 76 NKDGQLGLG-HTEEVLRF-TICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQL 133
Query: 210 G--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD--R 265
G HG ++ P+ I+ L KV AAG H+ G V+ +G
Sbjct: 134 GVPHGPRKCVV----------PQAIECLR-EKVVCVAAGLRHALATTATGSVFQWGTGLA 182
Query: 266 AVDKMLFQEGN-----HARRPSLISG----------------------GELYTWGSNENG 298
+ + L N A+ PS ++G GELY WG N++G
Sbjct: 183 SSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHG 242
Query: 299 CLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE-GKILTWG 345
L ++ L P+R++ F + V V GW H A +E GK+ TWG
Sbjct: 243 QLASRAV-FLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWG 290
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 101/276 (36%), Gaps = 63/276 (22%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S ++ L+ WG NS GQLGLG K +P C +G K G S VT
Sbjct: 8 SETVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCI-KSVTGGGGHSAVVTD 66
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
GG + G G+LG G +L F + K L G ++ A G+ + +
Sbjct: 67 GGDLFVCGLNKDGQLGLGHTEEVLRFT---------ICKPLRGCPIRQVACGWDFTIMLT 117
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
E G+V G A G + V H P +
Sbjct: 118 EKGQVLSCGSNA-----------------------------------FGQLGVPHGPRKC 142
Query: 315 QGPFS-ESPVDQVSC---GWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 369
P + E ++V C G +H A + G + WG G + SSG +L G +
Sbjct: 143 VVPQAIECLREKVVCVAAGLRHALATTATGSVFQWGTGLA---------SSGRRLCPGQN 193
Query: 370 VDYI----HPTIVNFGENVKALQVSCGFNHTGALLE 401
+ P+ V EN A+ G +H+ +L +
Sbjct: 194 LPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTD 229
>gi|348525468|ref|XP_003450244.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Oreochromis niloticus]
Length = 536
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 133/303 (43%), Gaps = 49/303 (16%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG L+S P + +L+ G G H + T G VYA G N + QLG +
Sbjct: 61 GCLGLGDLQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATADGEVYAWGHNGYSQLG-NG 119
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P +S L K V +++ G HH+ A+T DGE+Y WG N++GQ+G G A +
Sbjct: 120 TTNHGLTPALVSTNLLSKRVTEVACGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQ-- 177
Query: 166 PIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
P P +V CL A G S+AV G++ WG +G+LG G
Sbjct: 178 PTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGYNCNGQLGLGNNG--------- 228
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
++ TP I L+GV + A G+ H+ + + G V
Sbjct: 229 NQQTPCRIAALQGVNIVQVACGYAHTLALTDEGFV------------------------- 263
Query: 285 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKIL 342
Y WG+N G LG G+ P + E V+ +C HT+A G++L
Sbjct: 264 -----YAWGANSYGQLGTGNKSNQALPTPINTD-KERIVEVAACHTSHTSAAKTQSGQVL 317
Query: 343 TWG 345
WG
Sbjct: 318 MWG 320
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P +V + + +ACG HT+ LT G VYA G N+ G
Sbjct: 108 WGHNGYSQLGNGTTNHGLTPALVSTNLLSKRVTEVACGSHHTIALTTDGEVYAWGYNNSG 167
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P R+S K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 168 QVG-SGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGYNCNGQLGLGN 226
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P ++ L G+ Q A G+ ++A+T G V +WGA G+LG G +S
Sbjct: 227 NGNQ--QTPCRIAALQGVNIVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKS---- 280
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ P I + V++AA H SA ++G+V ++G
Sbjct: 281 -----NQALPTPINTDKERIVEVAACHTSHTSAAKTQSGQVLMWG 320
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 132/315 (41%), Gaps = 52/315 (16%)
Query: 111 YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
++L P L ++ + + + +TV+ E++ G N +G LGLG + + P
Sbjct: 19 FALLPPEELRLIRQACVFGSAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRID 78
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
V C I + G V T G+V +WG G +LG+G + L TP
Sbjct: 79 VLCGKKIVSLSYGTG-PHVVIATADGEVYAWGHNGYSQLGNGTTNHGL---------TPA 128
Query: 231 LIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS------- 282
L+ L +V A G H+ + +G VY +G ++ G+ A +P+
Sbjct: 129 LVSTNLLSKRVTEVACGSHHTIALTTDGEVYAWGYNNSGQV--GSGSTANQPTPRRVSSC 186
Query: 283 ------------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 324
++ GE+Y WG N NG LG+G+ +P R+ +
Sbjct: 187 LQNKVVVNIACGQLCSMAVLDNGEIYGWGYNCNGQLGLGNNGNQQTPCRI-AALQGVNIV 245
Query: 325 QVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 383
QV+CG+ HT A++ EG + W G +S GQLG GN + PT +N +
Sbjct: 246 QVACGYAHTLALTDEGFVYAW------------GANSYGQLGTGNKSNQALPTPINTDKE 293
Query: 384 VKALQVSCGFNHTGA 398
+C +HT A
Sbjct: 294 RIVEVAACHTSHTSA 308
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +GQ
Sbjct: 214 WGYNCNGQLGLGNNGNQQTPCRIAALQGVNIVQVACGYAHTLALTDEGFVYAWGANSYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
LG +L P I+ K+ +V+++ + H S+A T G++ MWG+
Sbjct: 274 LGTGNKSNQAL-PTPINTDKERIVEVAACHTSHTSAAKTQSGQVLMWGQ 321
>gi|344281814|ref|XP_003412672.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Loxodonta
africana]
Length = 531
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 140/300 (46%), Gaps = 47/300 (15%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACGGA-HTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A +K+L+ G A H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSAPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P P
Sbjct: 114 QGVAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
TP V++AA LHS C+++ + G +A +L G
Sbjct: 223 TP----------VRVAA---LHSVCVNQ----IVCG-------------YAHTLALTDEG 252
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTWG 345
LY WG+N G LG G+ + L SP V E V+ +C HT+A G + WG
Sbjct: 253 LLYAWGANTYGQLGTGNKNNLLSPAHVLVE-KERVVEIAACHSAHTSAAKTQSGNVYMWG 311
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 118/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGVAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K+VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA ++G VY++G
Sbjct: 276 --------PAHVLVEKERV-VEIAACHSAHTSAAKTQSGNVYMWG 311
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 144/313 (46%), Gaps = 53/313 (16%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V ++G + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACVFGTSG-NEALYVTDNDEVFVFGMNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSAPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGVAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V A G HS + +G V+ +G ++ G+ A +P+
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV S V+Q+
Sbjct: 180 IKKVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG ++ GQLG GN + + P V E +
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHV-LVEKERV 286
Query: 387 LQV-SCGFNHTGA 398
+++ +C HT A
Sbjct: 287 VEIAACHSAHTSA 299
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P + K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHVLVEKERVVEIAACHSAHTSAAKTQSGNVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ +P T C +F
Sbjct: 317 -SVTLPHLTHFSCTDDVF 333
>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
Length = 5072
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 178/387 (45%), Gaps = 57/387 (14%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 4241 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4298
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ +++ P + L+ V+ +++G H A+T +GE+Y WG+ +G+LG
Sbjct: 4299 GRLGVGGADSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4357
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 4358 GNRMS--YDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4411
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI+++ V+ +GD K+
Sbjct: 4412 -----SEDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRGGS 4466
Query: 276 NHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + P +L G +YTWG + LG GS+D + P++
Sbjct: 4467 DGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKK 4526
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V + ++ G H A S+ G++ TW G + GQLG G
Sbjct: 4527 VAA-LQGKKIISIATGSLHCVACSDSGEVYTW------------GDNDEGQLGDGTVTAI 4573
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGAL 399
P +V + ++V+CG HT AL
Sbjct: 4574 QRPRLVAALQGKHIVKVTCGSAHTLAL 4600
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 142/317 (44%), Gaps = 56/317 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 3206 WGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3265
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L + V+Q++ G + A+T DG ++ WG G+LG G
Sbjct: 3266 LGHGDN-STQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3324
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3325 SEGS--DTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3380
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ I L G +V A G LH + + G+VY
Sbjct: 3381 -------RKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVY------------------- 3414
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
WG N++G G G+ V P V G V++V+CG H+ A
Sbjct: 3415 -----------AWGDNDHGQQGSGNTFVNKKPALVIG-LDAVFVNRVACGSSHSIA---- 3458
Query: 340 KILTWGWGGSHGTFSED 356
WG + T E+
Sbjct: 3459 ------WGLPNATLEEE 3469
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 133/303 (43%), Gaps = 48/303 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + ++ +ACG AH+ +T +G V G +G+
Sbjct: 4347 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGR 4406
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + + +G + I D ++ WG G+LG G
Sbjct: 4407 LGHGDSED-QLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRG- 4464
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4465 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4521
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P+ + L+G K+ A G LH AC D
Sbjct: 4522 -------RRPKKVAALQGKKIISIATGSLHCVACSD------------------------ 4550
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
GE+YTWG N+ G LG G++ + P R+ + +V+CG HT A+S
Sbjct: 4551 -------SGEVYTWGDNDEGQLGDGTVTAIQRP-RLVAALQGKHIVKVTCGSAHTLALST 4602
Query: 339 GKI 341
++
Sbjct: 4603 SQL 4605
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 157/349 (44%), Gaps = 54/349 (15%)
Query: 79 GGAHTLFLT-ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF+ + G VYA G G+LG+ L P ++ L + VV+ + +G H
Sbjct: 3135 GGSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 3193
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+T+DG+++ WG+ +G+LG G + + P VE L + A G S A++
Sbjct: 3194 ALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVETLRSKKIRDVACGSSHSAAISS 3251
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG S ++ P+L+ L G +V A G +
Sbjct: 3252 QGELYTWGLGEYGRLGHGDNS---------TQLKPKLVAALAGRRVIQVACGSRDAQTLA 3302
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRP----------------------SLISGGELY 290
+ E+G V+ +GD K+ + P +L GE++
Sbjct: 3303 LTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVW 3362
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG G + P+ + G V V+ G H A+++ G++ WG
Sbjct: 3363 TWGKGDYYRLGHGGDQHVRKPQPIAG-LRGRRVIHVAVGALHCLAVTDAGQVYAWG---- 3417
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G GN P +V + V +V+CG +H+ A
Sbjct: 3418 -----DNDH---GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3458
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 150/351 (42%), Gaps = 79/351 (22%)
Query: 92 VYATGLNDFGQLG-----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
V GLND QLG S+ I L P+ I+G K + +
Sbjct: 3097 VMVWGLNDKEQLGGLKGSKVKVPTFSQTIS-RLRPIHIAGGSKSLFIVGQ---------- 3145
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
+G++Y G+ +NG+LGLG +P+P ++ L K+ A+ G + ++A+T GKV
Sbjct: 3146 NGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3203
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG +++ PRL++ L K++ A G HSA I G
Sbjct: 3204 FSWGEGEDGKLGHGNRTTL---------DKPRLVETLRSKKIRDVACGSSHSAAISSQGE 3254
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISG------------------------GELYTWGS 294
+Y +G ++ + + +P L++ G +++WG
Sbjct: 3255 LYTWGLGEYGRLGHGDNSTQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGAVFSWGD 3314
Query: 295 NENGCLGIG---SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 350
+ G LG G D H ER+ G V Q+ CG + + A++ G++ TWG G +
Sbjct: 3315 GDFGKLGRGGSEGSDTPHEIERLSG----IGVIQIECGAQFSLALTRAGEVWTWGKGDYY 3370
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHG D P + + + V+ G H A+ +
Sbjct: 3371 ------------RLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTD 3409
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 91/176 (51%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
WG G Y RLG G+ + + P V A +H + AL G AH+L LT G VYA G D+
Sbjct: 695 WGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADY 754
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + N+ S+ P+ + L K V ++ G S A+T DG+LY WGK S L ++
Sbjct: 755 GKLG-NGNLNGSMSPVLVESLPK-VQRVFAGAQFSMALTTDGQLYSWGKASCLGHQLVER 812
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+A+ +P + L A+G +A++ G+V WG S ++ SS
Sbjct: 813 SAQWCSVPRLISGLQHKRIVDVAVGVAHCLALSSCGEVFGWGRNDSQQICPSSVSS 868
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 112/230 (48%), Gaps = 18/230 (7%)
Query: 38 RFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
R A WGNG+ RLG G +R P + ++ +KA+ CG +++ +T +G +Y G
Sbjct: 639 RNAYSWGNGEDHRLGHGDTHARAVPTKITLLDR-CVKAVFCGCSYSAAITCSGNLYTWGR 697
Query: 98 NDFGQLGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQL 155
+ +LG + L + ++ + E++ ++ +G HS +T +G +Y WG G+L
Sbjct: 698 GTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADYGKL 757
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + P+ VE L + ++ G + S+A+T G++ SWG LGH
Sbjct: 758 GNGNLNGSMSPV--LVESLPKV--QRVFAGAQFSMALTTDGQLYSWGKASC--LGH---- 807
Query: 216 SILGFLRSTSEY--TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ ++++ PRLI L+ ++ A G H + G V+ +G
Sbjct: 808 ---QLVERSAQWCSVPRLISGLQHKRIVDVAVGVAHCLALSSCGEVFGWG 854
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 120/280 (42%), Gaps = 45/280 (16%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
C G H + + Y+ G + +LG + ++ P +I+ L + V + G +S+A
Sbjct: 627 CEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAV-PTKITLLDRCVKAVFCGCSYSAA 685
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGG 195
IT G LY WG+ + +LG G + P+PT V L+ ALG S+ +T
Sbjct: 686 ITCSGNLYTWGRGTYARLGHGNSDDQ--PLPTVVMALTEHEIIDVALGSGDAHSLCLTSE 743
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG G+LG+G + + +P L++ L V+ A A F S +
Sbjct: 744 GHVYAWGDADYGKLGNGNLNGSM---------SPVLVESLPKVQRVFAGAQF--SMALTT 792
Query: 256 NGRVYIFGDRAV--DKMLFQEGNHARRPSLISG----------------------GELYT 291
+G++Y +G + +++ + P LISG GE++
Sbjct: 793 DGQLYSWGKASCLGHQLVERSAQWCSVPRLISGLQHKRIVDVAVGVAHCLALSSCGEVFG 852
Query: 292 WGSNENGCL---GIGSIDVLHSPERVQGPFSESPVDQVSC 328
WG N++ + + S +L P V P P V+C
Sbjct: 853 WGRNDSQQICPSSVSSEPLLRVPILVALP--TLPASGVAC 890
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 124/335 (37%), Gaps = 105/335 (31%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG------------------ 185
+Y WG N GQLG G + ++ I PT E LS + Q A G
Sbjct: 4238 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4295
Query: 186 --------------------------FEQSVAVTGGGK----------VLSWGAGGSGRL 209
F + VAV GGK V +WG G G+L
Sbjct: 4296 GSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 4355
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S P+L++ L G+ V A G HSA I +G V +G +
Sbjct: 4356 GHGNRMSY---------DRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGR 4406
Query: 270 MLFQEGNHARRPSLISG------------------------GELYTWGSNENGCLGIGSI 305
+ + RP L+ +++WG + G LG G
Sbjct: 4407 LGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRGGS 4466
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 364
D P +++ + V +V CG + + A+++ G + TWG G H +L
Sbjct: 4467 DGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFH------------RL 4513
Query: 365 GHGNDVDYI-HPTIVNFGENVKALQVSCGFNHTGA 398
GHG+ VD++ P V + K + ++ G H A
Sbjct: 4514 GHGS-VDHVRRPKKVAALQGKKIISIATGSLHCVA 4547
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 15/90 (16%)
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
Y+WG+ E+ LG G P ++ + V V CG ++AAI+ G + TWG
Sbjct: 642 YSWGNGEDHRLGHGDTHARAVPTKIT--LLDRCVKAVFCGCSYSAAITCSGNLYTWG--- 696
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
GT++ +LGHGN D PT+V
Sbjct: 697 -RGTYA--------RLGHGNSDDQPLPTVV 717
>gi|7305093|ref|NP_038817.1| secretion-regulating guanine nucleotide exchange factor [Mus
musculus]
gi|38257405|sp|Q80YD6.2|SRGEF_MOUSE RecName: Full=Secretion-regulating guanine nucleotide exchange
factor; AltName: Full=Deafness locus-associated putative
guanine nucleotide exchange factor; Short=DelGEF;
AltName: Full=Guanine nucleotide exchange factor-related
protein
gi|6434206|emb|CAB60840.1| deafness locus associated putative guanine nucleotide exchange
factor [Mus musculus]
gi|110645832|gb|AAI19534.1| Secretion regulating guanine nucleotide exchange factor [Mus
musculus]
gi|110645834|gb|AAI19535.1| Secretion regulating guanine nucleotide exchange factor [Mus
musculus]
gi|127798601|gb|AAH49603.2| Secretion regulating guanine nucleotide exchange factor [Mus
musculus]
gi|148690982|gb|EDL22929.1| secretion regulating guanine nucleotide exchange factor [Mus
musculus]
Length = 464
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 176/411 (42%), Gaps = 79/411 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG E + P S F + +K++ GG H+ +T+ G ++ GLN G
Sbjct: 20 WGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLNKDG 79
Query: 102 QLGISENIGYSLEPLRISGLKK----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG +G++ E LR + K + Q++ G+ + +T G++ G N+ GQLG+
Sbjct: 80 QLG----LGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGV 135
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSG-RLGHGQE 214
K + +P +ECL AA G ++A T G V WG G SG RL GQ
Sbjct: 136 PHGPRKCV-VPQAIECLREKVVCVAA-GLRHALATTATGSVFQWGTGLASSGRRLCPGQN 193
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--------DRA 266
+ FL + P + LE A AG HSA + + G +Y++G RA
Sbjct: 194 LPL--FLTAKE---PSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLASRA 248
Query: 267 VDKMLFQ--EGNHARRPSLIS-------------GGELYTWGSNENGCLGIGSIDVLHSP 311
V L Q E ++ + + + G+++TWG + G LG L P
Sbjct: 249 VFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLG----RRLEPP 304
Query: 312 E-----------RVQGPFSESP--------VDQVSCGWKHTAAISEGKILTWGWGGSHGT 352
E QGP + P ++SCG +H A+ K +WGW
Sbjct: 305 EAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIRDKCCSWGW------ 358
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGALLE 401
+ G G G + + PT V + L V CG H+ A+ +
Sbjct: 359 ------NEHGMCGDGTESNVWTPTPVQALPPSPSRLLLVGCGAGHSLAVCQ 403
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 135/289 (46%), Gaps = 50/289 (17%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGK 149
++A G N +GQLG+ L P ++S + + ++ G HS+ +T G+L++ G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVFL-PQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGL 75
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N +GQLGLG +V+ T + L G +Q A G++ ++ +T G+VLS G+ G+L
Sbjct: 76 NKDGQLGLG-HTEEVLRF-TICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQL 133
Query: 210 G--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD--R 265
G HG ++ P+ I+ L KV AAG H+ G V+ +G
Sbjct: 134 GVPHGPRKCVV----------PQAIECLR-EKVVCVAAGLRHALATTATGSVFQWGTGLA 182
Query: 266 AVDKMLFQEGN-----HARRPSLISG----------------------GELYTWGSNENG 298
+ + L N A+ PS ++G GELY WG N++G
Sbjct: 183 SSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHG 242
Query: 299 CLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE-GKILTWG 345
L ++ L P+R++ F + V V GW H A +E GK+ TWG
Sbjct: 243 QLASRAV-FLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWG 290
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 101/276 (36%), Gaps = 63/276 (22%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S ++ L+ WG NS GQLGLG K +P C +G K G S VT
Sbjct: 8 SETVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCI-KSVTGGGGHSAVVTD 66
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
GG + G G+LG G +L F + K L G ++ A G+ + +
Sbjct: 67 GGDLFVCGLNKDGQLGLGHTEEVLRFT---------ICKPLRGCPIRQVACGWDFTIMLT 117
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
E G+V G A G + V H P +
Sbjct: 118 EKGQVLSCGSNA-----------------------------------FGQLGVPHGPRKC 142
Query: 315 QGPFS-ESPVDQVSC---GWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 369
P + E ++V C G +H A + G + WG G + SSG +L G +
Sbjct: 143 VVPQAIECLREKVVCVAAGLRHALATTATGSVFQWGTGLA---------SSGRRLCPGQN 193
Query: 370 VDYI----HPTIVNFGENVKALQVSCGFNHTGALLE 401
+ P+ V EN A+ G +H+ +L +
Sbjct: 194 LPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTD 229
>gi|55249804|gb|AAH85921.1| Herc6 protein, partial [Rattus norvegicus]
Length = 1034
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 122/249 (48%), Gaps = 18/249 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG S +S RP A + ++CG H++ + G V+ G GQL
Sbjct: 53 GDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQL 112
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E+ S P +I+ L +++Q+S G++HS A++ DG+++ WG N GQLGLG
Sbjct: 113 GIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLC 172
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P KV+ L GI Q A G S A++ G WG SG+L S+
Sbjct: 173 SQAS-PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSA------ 225
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
Y P I L+ + V + G+ H++ + E+G+V+ FG + +++ H+ R
Sbjct: 226 KEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQL-----QHSPRSG 280
Query: 281 ---PSLISG 286
P LI G
Sbjct: 281 RGGPQLIEG 289
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 152/332 (45%), Gaps = 62/332 (18%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
LKA A G H+L L VY+ G N GQLG ++ + P I L + +S G
Sbjct: 31 LKA-ASGERHSLLLFSNHRVYSCGDNSRGQLG-QKSPQSTKRPEPIQALSTVHIDLVSCG 88
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+ G ++ WG S GQLG+G ++ ++ +PTK+ L+GI Q + G S+A
Sbjct: 89 KEHSVAVCHQGRVFTWGAGSEGQLGIG-ESKEISFMPTKINSLAGIKIIQVSCGHYHSLA 147
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ G+V SWG+ G+LG G S+ +P+ +K LEG+ + AAG
Sbjct: 148 LSEDGQVFSWGSNRQGQLGLGN--------NLCSQASPQKVKSLEGIPLAQVAAG----- 194
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGI---GSIDVL 308
G H+ SL+ G + WG+N +G L + + + +
Sbjct: 195 -----------------------GTHSFALSLM--GTSFGWGNNRSGQLALSGNSAKEQI 229
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
+ P + G V +SCG++HT+ ++E G++ T+G SS QL H
Sbjct: 230 YKPHSI-GALKTLNVVYISCGYEHTSVLTEDGQVFTFGG------------SSSEQLQHS 276
Query: 368 NDVDYIHPTIVN-FGENVKALQVSCGFNHTGA 398
P ++ G +V Q+ CG HT A
Sbjct: 277 PRSGRGGPQLIEGIGGHVS--QIECGSYHTIA 306
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 135/293 (46%), Gaps = 57/293 (19%)
Query: 114 EPLRI---SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
+P R+ +GLK +++ ++G HS + + +Y G NS GQLG +K+ + P
Sbjct: 18 QPRRLEAGTGLK--LLKAASGERHSLLLFSNHRVYSCGDNSRGQLG--QKSPQSTKRPEP 73
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
++ LS + + G E SVAV G+V +WGAG G+LG G+ I + P
Sbjct: 74 IQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEI--------SFMPT 125
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
I L G+K+ + G HS + E+G+V+
Sbjct: 126 KINSLAGIKIIQVSCGHYHSLALSEDGQVF------------------------------ 155
Query: 291 TWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 349
+WGSN G LG+G+ + SP++V+ P+ QV+ G H+ A+S ++GWG +
Sbjct: 156 SWGSNRQGQLGLGNNLCSQASPQKVKS-LEGIPLAQVAAGGTHSFALSLMGT-SFGWGNN 213
Query: 350 H-GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G + G+S+ Q+ P + + + + +SCG+ HT L E
Sbjct: 214 RSGQLALSGNSAKEQI--------YKPHSIGALKTLNVVYISCGYEHTSVLTE 258
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 3/176 (1%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G S E + P ++ + ++CG H+L L+E G V++ G N G
Sbjct: 104 WGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQG 163
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ N+ P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 164 QLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGN 223
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
A + I P + L + + G+E + +T G+V ++G S +L H S
Sbjct: 224 SAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRS 279
>gi|357520085|ref|XP_003630331.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524353|gb|AET04807.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 371
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 118/227 (51%), Gaps = 23/227 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG G+ G+LG G + R P SAF+ + ++ CG +T+ +++G VY+ G DFG
Sbjct: 128 WGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFG 187
Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG + + P+R + GL+ + QIS G H A+T++ ++ WG+N NG+LGLG
Sbjct: 188 RLGHGDPSDLFIPHPIRALQGLR--IKQISCGDCHCLAVTMENKVLSWGRNQNGELGLG- 244
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K +P K+ GI K A G E SVA+T G + WG G G LG G +
Sbjct: 245 -TTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTND--- 300
Query: 220 FLRSTSEYTPRLIKE---LEGVKVKIAAAGFLHSACIDENGRVYIFG 263
RLI E ++G K+ + + G+ H+ I +G +Y G
Sbjct: 301 ----------RLIPEKVNIDGDKIVMVSCGWRHTISISSSGGLYTHG 337
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 128/291 (43%), Gaps = 59/291 (20%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDG-ELYMWGK 149
V + G + GQLG + L P ++S +++V ++ G ++ A + G ++Y WG
Sbjct: 125 VCSWGRGEDGQLGHGDT-DDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGW 183
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
G+LG G + IP P + L G+ KQ + G +AVT KVLSWG +G L
Sbjct: 184 GDFGRLGHGDPSDLFIPHP--IRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGEL 241
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
G G + + P+ I EG+++K+ AAG HS I E+G
Sbjct: 242 GLGT---------TKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDG------------ 280
Query: 270 MLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 329
+LY WG G LG+G + PE+V + VSCG
Sbjct: 281 ------------------DLYGWGWGRYGNLGLGDTNDRLIPEKVN--IDGDKIVMVSCG 320
Query: 330 WKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
W+HT +I S G + T GW S GQLGHG+ D + P V
Sbjct: 321 WRHTISISSSGGLYTHGW------------SKYGQLGHGDFEDCLVPRKVQ 359
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 110/252 (43%), Gaps = 57/252 (22%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGG 205
WG+ +GQLG G +++P TK+ G G + +VA + GK V SWG G
Sbjct: 128 WGRGEDGQLGHGDTDDRLLP--TKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGD 185
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
GRLGHG S + + P I+ L+G+++K + G H + +V
Sbjct: 186 FGRLGHGDPSDL---------FIPHPIRALQGLRIKQISCGDCHCLAVTMENKVL----- 231
Query: 266 AVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 325
+WG N+NG LG+G+ H P+++ F +
Sbjct: 232 -------------------------SWGRNQNGELGLGTTKDSHVPQKILA-FEGIRIKM 265
Query: 326 VSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 384
V+ G +H+ AI+E G + WGWG G LG G+ D + P VN +
Sbjct: 266 VAAGAEHSVAITEDGDLYGWGWG------------RYGNLGLGDTNDRLIPEKVNI-DGD 312
Query: 385 KALQVSCGFNHT 396
K + VSCG+ HT
Sbjct: 313 KIVMVSCGWRHT 324
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G + P A + +K ++CG H L +T V + G N G+
Sbjct: 181 WGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGE 240
Query: 103 LGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG+ +++ + L G++ ++V + G HS AIT DG+LY WG G LGLG
Sbjct: 241 LGLGTTKDSHVPQKILAFEGIRIKMV--AAGAEHSVAITEDGDLYGWGWGRYGNLGLGDT 298
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++IP ++ G + G+ +++++ G + + G G+LGHG L
Sbjct: 299 NDRLIPEKVNID---GDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCL-V 354
Query: 221 LRSTSEYTPRLIKEL 235
R + +LI ++
Sbjct: 355 PRKVQALSDKLISQV 369
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 4/154 (2%)
Query: 31 ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
++ T++ + + WG G LGLG+ + P AFE +K +A G H++ +TE G
Sbjct: 222 LAVTMENKVLS-WGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDG 280
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
+Y G +G LG+ + L P +++ ++V +S G+ H+ +I+ G LY G +
Sbjct: 281 DLYGWGWGRYGNLGLGDT-NDRLIPEKVNIDGDKIVMVSCGWRHTISISSSGGLYTHGWS 339
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
GQLG G + +P KV+ LS Q L
Sbjct: 340 KYGQLGHGDFEDCL--VPRKVQALSDKLISQVIL 371
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 15/118 (12%)
Query: 284 ISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG--KI 341
+SG + +WG E+G LG G D P ++ F + V+CG +T A S+ +
Sbjct: 120 VSGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSA-FDGQDIVSVTCGADYTVARSKSGKDV 178
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+WGWG G+LGHG+ D P + + ++ Q+SCG H A+
Sbjct: 179 YSWGWG------------DFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAV 224
>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
Length = 4947
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3139 WGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3198
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSA--ITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L+ VVQ++ G + +T DG ++ WG G+LG G
Sbjct: 3199 LGHGDNC-TQLKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRG- 3256
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +V+ L+G+ Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3257 -GSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHV-- 3313
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P I+ L G KV A G LH + ++G+V
Sbjct: 3314 -------RKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQV-------------------- 3346
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
Y WG N++G G G+ V P V G V++V+CG H+ A
Sbjct: 3347 ----------YAWGDNDHGQQGSGNTIVNKKPSLVLG-LDGIFVNRVACGSSHSVA 3391
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 132/299 (44%), Gaps = 48/299 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ +S RP + + + +ACG AH+ +T G V G +G+
Sbjct: 4200 WGEGEDGKLGHGNRDSYDRPKLIESLSGIGVVDIACGSAHSACITIQGHVLTWGKGRYGR 4259
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4260 LGHGDSED-QLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4317
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4318 -GSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHV-- 4374
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P+ + L+G K+ A G LH AC D
Sbjct: 4375 -------RRPKKVAALQGKKIISIATGSLHCVACSD------------------------ 4403
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
GE++TWG N+ G LG G++ + P VQ + +V CG HT A+S
Sbjct: 4404 -------AGEVFTWGDNDEGQLGDGTVSAIQRPRLVQS-LQGKHIVKVICGSAHTLALS 4454
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 175/391 (44%), Gaps = 59/391 (15%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A +A GG TL+ +T G +YATG
Sbjct: 4094 WGHNHRGQLG-GLDGSRIKNPTPCEALSLLRPIQIA-GGEQTLYAVTPDGKLYATGYGAG 4151
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ + +E L+ +KK V +++G H A++ DGE++ WG+ +G+LG
Sbjct: 4152 GRLGVGGTDSVTTPTLVESLQHVMIKK--VAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4209
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + + P +E LSGI A G S +T G VL+WG G GRLGHG
Sbjct: 4210 HGNRDS--YDRPKLIESLSGIGVVDIACGSAHSACITIQGHVLTWGKGRYGRLGHGD--- 4264
Query: 217 ILGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4265 ------SEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 4318
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG G+ D + P+
Sbjct: 4319 SDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPK 4378
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+V + ++ G H A S+ G++ TW G + GQLG G
Sbjct: 4379 KVAA-LQGKKIISIATGSLHCVACSDAGEVFTW------------GDNDEGQLGDGTVSA 4425
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGALLEY 402
P +V + ++V CG HT AL Y
Sbjct: 4426 IQRPRLVQSLQGKHIVKVICGSAHTLALSTY 4456
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 181/388 (46%), Gaps = 59/388 (15%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-TETGCVYATGLN 98
+WG D +LG G S+ + P S + LK + GG+ +LF+ ++ G +YA G
Sbjct: 3032 VWGLNDKEQLG-GLKGSKVKLPTYSSVLSQ--LKPIHIAGGSKSLFIVSQDGKLYACGEG 3088
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LG+ N P ++ L + VV+ + +G H+ A+T+DG+++ WG+ +G+L
Sbjct: 3089 TNGRLGLGHNNNVP-TPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3147
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + + P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 3148 GHGNRL--TLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD-- 3203
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGD--------- 264
+ ++ P+L+ L+ +V A G + C+ E+G V+ +GD
Sbjct: 3204 -------NCTQLKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRG 3256
Query: 265 --------RAVDKM-----LFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSP 311
VD++ + E +L GE++TWG + LG G+ + P
Sbjct: 3257 GSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHVRKP 3316
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+QG V V+ G H A+++ G++ WG ++ H GQ G GN +
Sbjct: 3317 TPIQG-LRGKKVIHVAVGALHCLAVTDSGQVYAWG---------DNDH---GQQGSGNTI 3363
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHTGA 398
P++V + + +V+CG +H+ A
Sbjct: 3364 VNKKPSLVLGLDGIFVNRVACGSSHSVA 3391
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 130/317 (41%), Gaps = 62/317 (19%)
Query: 90 GCVYATGLNDFGQ-LGISENIGYSLE--PLRISGLKKEVVQISTGY--HHSSAITVDGEL 144
CVY L D G L +S I + + P ++ GL+ +VQ++ H A+ G++
Sbjct: 573 NCVYI--LTDSGTVLYLSHAISMTEDNYPAQVKGLECTIVQLAAHCEGRHVLALASSGDV 630
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
Y WG G+LG G +AK +PT++ L+ G S A+T G++ +WG G
Sbjct: 631 YSWGSGDGGRLGHGDTSAK--ELPTRIAALADRQVTGVFCGSSYSAAITASGELYTWGRG 688
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIF 262
GRLGHG S +Y P L+ L+ +V A G HS C+ E G + +
Sbjct: 689 TYGRLGHGN---------SEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAFAW 739
Query: 263 GDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
GD K+ GN + C+G P +V P +
Sbjct: 740 GDGDFGKL----GNES--------------------CVGTSV------PVQVDLPQASCV 769
Query: 323 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 382
V S A EG + TWG G GG+LGHGN P +V E
Sbjct: 770 VKVFSGSQFSVALTREGTVYTWGKG------------HGGRLGHGNSEHSPVPKMVQALE 817
Query: 383 NVKALQVSCGFNHTGAL 399
K + ++ G H AL
Sbjct: 818 GKKIVDLAVGLAHCLAL 834
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 21/227 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G ++ P +A + + CG +++ +T +G +Y G +G+
Sbjct: 633 WGSGDGGRLGHGDTSAKELPTRIAALADRQVTGVFCGSSYSAAITASGELYTWGRGTYGR 692
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
LG N P ++ LK VV ++ G HS +T G + WG G+LG
Sbjct: 693 LG-HGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAFAWGDGDFGKLGNES 751
Query: 160 KAAKVIPIPT---KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+P+ + C+ +F+ G + SVA+T G V +WG G GRLGHG
Sbjct: 752 CVGTSVPVQVDLPQASCVVKVFS-----GSQFSVALTREGTVYTWGKGHGGRLGHGN--- 803
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S P++++ LEG K+ A G H + +G +Y +G
Sbjct: 804 ------SEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGELYGWG 844
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 134/343 (39%), Gaps = 107/343 (31%)
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKV----------------------------------- 164
V ++ +WG N QLG G K +KV
Sbjct: 3026 VSSKVLVWGLNDKEQLG-GLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYA 3084
Query: 165 ----------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGS 206
+P P +V LS K+ A+ G + ++A+T GKV SWG G
Sbjct: 3085 CGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGED 3144
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--- 263
G+LGHG R T E P+LI+ L +++ A G HSA I +G +Y +G
Sbjct: 3145 GKLGHGN--------RLTLE-KPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGE 3195
Query: 264 ----------DRAVDKMLFQEGNH-----------ARRPSLISGGELYTWGSNENGCLGI 302
+ K++ +H A+ L G +++WG + G LG
Sbjct: 3196 YGRLGHGDNCTQLKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGR 3255
Query: 303 GSID---VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
G + + H +R+ G V Q+ CG + + A+++ G++ TWG G +
Sbjct: 3256 GGSEGCSIPHQVDRLNG----VGVMQIECGAQFSLALTKAGEVWTWGKGDYY-------- 3303
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHG D PT + K + V+ G H A+ +
Sbjct: 3304 ----RLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTD 3342
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 87/198 (43%), Gaps = 16/198 (8%)
Query: 39 FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
A WG+GD+G+LG S PV + + + G ++ LT G VY G
Sbjct: 735 LAFAWGDGDFGKLGNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVALTREGTVYTWGKG 794
Query: 99 DFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG N +S P + L+ K++V ++ G H A+T GELY WG+N Q +
Sbjct: 795 HGGRLG-HGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGELYGWGRNDFQQ--I 851
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ PI T + I T L A G + L W S HG + I
Sbjct: 852 CPECVTRDPIIT-----APILTTPPTLRVAGMAA--GVAQSLFWCHSSS----HGIPAKI 900
Query: 218 LGFLRSTSEYTPRLIKEL 235
F+ SE+T RL+ +L
Sbjct: 901 -PFVVDLSEHTFRLLDQL 917
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 18/131 (13%)
Query: 274 EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 333
EG H +L S G++Y+WGS + G LG G P R+ ++ V V CG ++
Sbjct: 617 EGRHVL--ALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAA-LADRQVTGVFCGSSYS 673
Query: 334 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS-- 390
AAI+ G++ TWG GT+ G+LGHGN D PT+V + + + V+
Sbjct: 674 AAITASGELYTWG----RGTY--------GRLGHGNSEDKYVPTLVTALKAHRVVHVALG 721
Query: 391 CGFNHTGALLE 401
CG H+ + E
Sbjct: 722 CGDAHSLCVTE 732
>gi|74140640|dbj|BAB27358.3| unnamed protein product [Mus musculus]
Length = 576
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 112/212 (52%), Gaps = 8/212 (3%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
++CG H++ + G V+A G GQLGI E S P +I L +++Q+S G++H
Sbjct: 6 VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYH 65
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A++ DG ++ WG+NS GQLGLGK ++ IP KV+ L GI Q A G S A++
Sbjct: 66 SLALSEDGHVFSWGRNSEGQLGLGKN-SRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSL 124
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G WG+ SG+L ++ G Y P I L+ + V + G+ H+A +
Sbjct: 125 TGTSFGWGSNRSGQL------ALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLT 178
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
E G+V+ FG + ++ + R P LI G
Sbjct: 179 EEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEG 210
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G E + P A + ++CG H+L L+E G V++ G N G
Sbjct: 25 WGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEG 84
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ +N P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 85 QLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGN 144
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + I P + L + + G+E + +T G+V ++G SG+L S G
Sbjct: 145 KVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 204
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+LI+ + G +I A + A + G+V G
Sbjct: 205 ---------PQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 239
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 93/221 (42%), Gaps = 54/221 (24%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E SVAV GKV +WGAG G+LG G+ I + P IK L G+K+ +
Sbjct: 9 GKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEI--------SFMPTKIKALAGIKIIQVS 60
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGS 304
G HS + E+G V+ +WG N G LG+G
Sbjct: 61 CGHYHSLALSEDGHVF------------------------------SWGRNSEGQLGLGK 90
Query: 305 IDVLHS-PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ P++V+ P+ QV+ G H+ A+S ++GWG + GQ
Sbjct: 91 NSRSQAIPQKVKS-LEGIPLAQVAAGGTHSFALSLTGT-SFGWGSNR----------SGQ 138
Query: 364 LG-HGNDV--DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
L GN V P + +N+ + +SCG+ HT L E
Sbjct: 139 LALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTE 179
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 16/82 (19%)
Query: 323 VDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHG--NDVDYIHPTIVN 379
VD VSCG +H+ A+ +GK+ WG G S GQLG G ++ ++ PT +
Sbjct: 3 VDLVSCGKEHSVAVCHKGKVFAWGAG------------SEGQLGIGEFKEISFM-PTKIK 49
Query: 380 FGENVKALQVSCGFNHTGALLE 401
+K +QVSCG H+ AL E
Sbjct: 50 ALAGIKIIQVSCGHYHSLALSE 71
>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 279
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 118/227 (51%), Gaps = 23/227 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG G+ G+LG G + R P SAF+ + ++ CG +T+ +++G VY+ G DFG
Sbjct: 36 WGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFG 95
Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG + + P+R + GL+ + QIS G H A+T++ ++ WG+N NG+LGLG
Sbjct: 96 RLGHGDPSDLFIPHPIRALQGLR--IKQISCGDCHCLAVTMENKVLSWGRNQNGELGLG- 152
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K +P K+ GI K A G E SVA+T G + WG G G LG G +
Sbjct: 153 -TTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTND--- 208
Query: 220 FLRSTSEYTPRLIKE---LEGVKVKIAAAGFLHSACIDENGRVYIFG 263
RLI E ++G K+ + + G+ H+ I +G +Y G
Sbjct: 209 ----------RLIPEKVNIDGDKIVMVSCGWRHTISISSSGGLYTHG 245
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 121/280 (43%), Gaps = 57/280 (20%)
Query: 119 SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
S V+ IS G H+ A+ + WG+ +GQLG G ++ +PTK+ G
Sbjct: 8 SASPPHVLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRL--LPTKLSAFDGQD 65
Query: 179 TKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
G + +VA + GK V SWG G GRLGHG S + + P I+ L+G
Sbjct: 66 IVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDL---------FIPHPIRALQG 116
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNEN 297
+++K + G H + +V +WG N+N
Sbjct: 117 LRIKQISCGDCHCLAVTMENKV------------------------------LSWGRNQN 146
Query: 298 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 356
G LG+G+ H P+++ F + V+ G +H+ AI+E G + WGWG
Sbjct: 147 GELGLGTTKDSHVPQKILA-FEGIRIKMVAAGAEHSVAITEDGDLYGWGWG--------- 196
Query: 357 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
G LG G+ D + P VN + K + VSCG+ HT
Sbjct: 197 ---RYGNLGLGDTNDRLIPEKVNI-DGDKIVMVSCGWRHT 232
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 131/284 (46%), Gaps = 37/284 (13%)
Query: 66 SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KE 124
SA H L ++ G +HT+ L V + G + GQLG + L P ++S ++
Sbjct: 8 SASPPHVL-LISAGASHTVALLTGNVVCSWGRGEDGQLGHGDT-DDRLLPTKLSAFDGQD 65
Query: 125 VVQISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V ++ G ++ A + G ++Y WG G+LG G + IP P + L G+ KQ +
Sbjct: 66 IVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHP--IRALQGLRIKQIS 123
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G +AVT KVLSWG +G LG G + + P+ I EG+++K+
Sbjct: 124 CGDCHCLAVTMENKVLSWGRNQNGELGLGT---------TKDSHVPQKILAFEGIRIKMV 174
Query: 244 AAGFLHSACIDENGRVYIFG-------------DRAV--------DKMLFQEGNHARRPS 282
AAG HS I E+G +Y +G DR + DK++ S
Sbjct: 175 AAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDKIVMVSCGWRHTIS 234
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
+ S G LYT G ++ G LG G + P +VQ S+ + QV
Sbjct: 235 ISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQA-LSDKLISQV 277
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G + P A + +K ++CG H L +T V + G N G+
Sbjct: 89 WGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGE 148
Query: 103 LGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG+ +++ + L G++ ++V + G HS AIT DG+LY WG G LGLG
Sbjct: 149 LGLGTTKDSHVPQKILAFEGIRIKMV--AAGAEHSVAITEDGDLYGWGWGRYGNLGLGDT 206
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++IP ++ G + G+ +++++ G + + G G+LGHG L
Sbjct: 207 NDRLIPEKVNID---GDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCL-V 262
Query: 221 LRSTSEYTPRLIKEL 235
R + +LI ++
Sbjct: 263 PRKVQALSDKLISQV 277
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 4/154 (2%)
Query: 31 ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
++ T++ + + WG G LGLG+ + P AFE +K +A G H++ +TE G
Sbjct: 130 LAVTMENKVLS-WGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDG 188
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
+Y G +G LG+ + L P +++ ++V +S G+ H+ +I+ G LY G +
Sbjct: 189 DLYGWGWGRYGNLGLGDT-NDRLIPEKVNIDGDKIVMVSCGWRHTISISSSGGLYTHGWS 247
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
GQLG G + +P KV+ LS Q L
Sbjct: 248 KYGQLGHGDFEDCL--VPRKVQALSDKLISQVIL 279
>gi|390479661|ref|XP_002762827.2| PREDICTED: LOW QUALITY PROTEIN: X-linked retinitis pigmentosa
GTPase regulator, partial [Callithrix jacchus]
Length = 817
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 171/387 (44%), Gaps = 57/387 (14%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVAVHLSCGDEHSAVVTGNNKLY--VFGSNNWGQLGLGSKSAVSKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG ND GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHRVSFFTSQHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL +P + G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGLPNILNACVPHQVTI----GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG E +L R P+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYIFGESENGKLGLPNE--LLSNHR-----IPQLVPEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
S + E+ +YT+G + G LG+G++
Sbjct: 255 SVVLTEDA-------------------------------VYTFGLGQFGQLGLGTLLFET 283
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 369
S +V + +SCG H A +++ ++ G HG LG N
Sbjct: 284 SEPKVVENIGNKTISYISCGENHAALLTDNGLMYTFGDGRHGKLG---------LGLENF 334
Query: 370 VDYIHPTI-VNFGENVKALQVSCGFNH 395
+ PT+ NF + V L V+CG H
Sbjct: 335 TNQFTPTLCCNFLKFVVKL-VACGGCH 360
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 148/325 (45%), Gaps = 52/325 (16%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ I+ENI P + V +S G HS+ +T + +LY++G N+ GQLGLG
Sbjct: 17 FGKSKIAENI-----PGKFWFKNDVAVHLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGS 71
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K+A + PT V+ L K AA G ++ T GG V + G G+LG G
Sbjct: 72 KSA--VSKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTT 129
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F R + + IK+L +AG SA + E+GR++++GD + ++ +A
Sbjct: 130 FHRVSFFTSQHKIKQL--------SAGSNTSAALTEDGRLFMWGDNSEGQIGLPNILNAC 181
Query: 280 RPSLI--------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
P + + GELY +G +ENG LG+ + L S R+
Sbjct: 182 VPHQVTIGKPVSWISCGYYHSAFVTTDGELYIFGESENGKLGLP--NELLSNHRIPQLVP 239
Query: 320 ESP--VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPT 376
E P V QV+CG +H+ ++E + T+G G GQLG G + + P
Sbjct: 240 EIPEKVIQVACGGEHSVVLTEDAVYTFGLG------------QFGQLGLGTLLFETSEPK 287
Query: 377 IVNFGENVKALQVSCGFNHTGALLE 401
+V N +SCG NH L +
Sbjct: 288 VVENIGNKTISYISCGENHAALLTD 312
>gi|300794911|ref|NP_001178141.1| RCC1 and BTB domain-containing protein 1 [Bos taurus]
gi|296481892|tpg|DAA24007.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
domain containing protein 1 [Bos taurus]
Length = 531
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 139/301 (46%), Gaps = 49/301 (16%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
L P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
TP V++AA LHS C+++ + G +A +L
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ----IVCG-------------YAHTLALTDE 251
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTW 344
G LY WG+N G LG G+ + L SP + E ++ +C HT+A G + W
Sbjct: 252 GLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVIEIAACHSAHTSAAKTQGGHVYMW 310
Query: 345 G 345
G
Sbjct: 311 G 311
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V ++IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-IEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 141/313 (45%), Gaps = 53/313 (16%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T E++++G N + LG G + + +P K+E
Sbjct: 13 LSPHEIASIRKACV-FGTSANEALYVTDSDEVFVFGLNYSSCLGTGDNHSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + L ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V A G HS + +G V+ +G ++ G+ A +P+
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV S V+Q+
Sbjct: 180 IKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG ++ GQLG GN + + P + E +
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHI-MVEKERV 286
Query: 387 LQV-SCGFNHTGA 398
+++ +C HT A
Sbjct: 287 IEIAACHSAHTSA 299
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
LG + N L P I K+ V++I+ + H S+A T G +YMWG+
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQ 312
>gi|48475110|gb|AAT44179.1| putative regulator of chromosome condensation protein [Oryza sativa
Japonica Group]
gi|52353417|gb|AAU43985.1| putative regulator of chromosome condensation protein [Oryza sativa
Japonica Group]
Length = 1064
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 172/402 (42%), Gaps = 71/402 (17%)
Query: 14 LKQDIKLGSKLGIC-KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
L+ D+ L + C R I T ++ WG GRLG G+ RP + + +
Sbjct: 269 LESDVVLDVQQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSN 328
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDF--GQLGISENIGYSLEPLRISGLKK--EVVQI 128
++ +ACG HT +T +G +Y G + G LG + + L P R+SG + +V+ +
Sbjct: 329 VEYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWL-PKRVSGPLEGLQVLSV 387
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
+ G HS+ G+L+ +G + G LG G + + + P +VE LSG + A G
Sbjct: 388 ACGSWHSALTMSSGKLFTFGDGTFGSLGHGDRES--VAYPKEVEALSGFRAMKVACGVWH 445
Query: 189 SVAVTG----------GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
S A+ K+ +WG G RLGHG + + L P ++ L
Sbjct: 446 SAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKL---------VPTCVQAL--- 493
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENG 298
+D N G H+ +L + G ++T GS+ NG
Sbjct: 494 --------------VDHNFHQVACG-------------HSMTVALATSGHVFTMGSSNNG 526
Query: 299 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDG 357
LG D P VQ V+++SCG H AA+ S ++ TWG G +
Sbjct: 527 QLGNPKADG-KQPCMVQDKLGNELVEEISCGSNHVAALTSRSEVYTWGMGAN-------- 577
Query: 358 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G+LGHG+ D PT+V+ ++ +SCG N T +
Sbjct: 578 ----GRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCI 615
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 113/268 (42%), Gaps = 59/268 (22%)
Query: 142 GELYMWGK------NSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
G++Y+WG+ S G L K +IP P + + + + +Q A G T
Sbjct: 235 GDVYVWGEVWTEVLPSEGSSNYLCSKTDFLIPKPLESDVVLDV--QQIACGSRHIGLTTR 292
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G+V +WG GRLGHG ++ I P+L++ L V+ A G H+ +
Sbjct: 293 QGEVFTWGEELGGRLGHGTDTDIC---------RPKLVESLAVSNVEYIACGEFHTCVVT 343
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
+G +Y +GD GS G LG G+ P+RV
Sbjct: 344 ASGDLYDWGD----------------------------GSYNAGLLGHGTGVSHWLPKRV 375
Query: 315 QGPFSESPVDQVSCG-WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
GP V V+CG W +S GK+ T+G GTF G LGHG+
Sbjct: 376 SGPLEGLQVLSVACGSWHSALTMSSGKLFTFG----DGTF--------GSLGHGDRESVA 423
Query: 374 HPTIVNFGENVKALQVSCGFNHTGALLE 401
+P V +A++V+CG H+ A++E
Sbjct: 424 YPKEVEALSGFRAMKVACGVWHSAAIVE 451
>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
Length = 1057
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 160/365 (43%), Gaps = 54/365 (14%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+LGLG +E P +++ +ACG HTLFLT G VYA G ND
Sbjct: 10 WGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACGSNDH 69
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + PL I L+ VV QIS G HS A++ G++ WG N GQLG
Sbjct: 70 SQLGHELP---TKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDNDCGQLGHAT 126
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+++ +P V L Q A G S+A+T G++ SWG+ G+LG +
Sbjct: 127 D-KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDL-- 183
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHA 278
T P + L G+ + A G HS I ++G V+ +G ++ L E N A
Sbjct: 184 ----THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEANRA 239
Query: 279 RRPSLIS-----------GGELYTWGSNENGCL------------GIGSIDVLHSPERVQ 315
L + G E + +NE G G S ++L R+
Sbjct: 240 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEML---PRMV 296
Query: 316 GPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
S + QV+CG +HT A+ S G++ +G G S GQLG + +
Sbjct: 297 MELMGSTITQVACGNRHTLALVPSRGRVYAFGLG------------SSGQLGTRSTKSLM 344
Query: 374 HPTIV 378
P +V
Sbjct: 345 LPQVV 349
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 131/299 (43%), Gaps = 36/299 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ D+ +LG L ++ RP++ + + + ++CG H+L L+E G V + G ND GQL
Sbjct: 65 GSNDHSQLG-HELPTK-RPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDNDCGQL 122
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG-KKA 161
G + + P + L K VVQI+ G +HS A+T GELY WG N GQLG+ K
Sbjct: 123 GHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKD 182
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P ++ L GI A G S ++ G V WG G+LG E+
Sbjct: 183 LTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEA------ 236
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRAVD 268
+ P +K L + V+ A G S + G V+ G + +
Sbjct: 237 ---NRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 293
Query: 269 KMLFQE----------GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
+M+ + GN + S G +Y +G +G LG S L P+ V GP
Sbjct: 294 RMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIGP 352
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 121/276 (43%), Gaps = 49/276 (17%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P+++ +Q A G ++ +T GKV + G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACG 65
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ +LGH + P LI EL+ V + G HS + E G+V +
Sbjct: 66 SNDHSQLGHELPTK-----------RPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSW 114
Query: 263 GDR-------AVDKMLFQEGNHARR----------------PSLISGGELYTWGSNENGC 299
GD A DK + Q R+ +L S GELY+WGSN G
Sbjct: 115 GDNDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQ 174
Query: 300 LGIGSI-DVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 356
LG+ S D+ H P R+ P+ ++CG H+ IS+ + +GW
Sbjct: 175 LGVNSPKDLTHCNYPLRLTTLLG-IPLAAIACGGNHSFLISKSGAV-FGW---------- 222
Query: 357 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
G ++ GQLG ++ + +PT + + V+CG
Sbjct: 223 GRNNCGQLGLNDEANRAYPTQLKTLRTLGVRFVACG 258
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 82/210 (39%), Gaps = 54/210 (25%)
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+ G ++ WG+ G+LG LG + TP I V+ A G H+
Sbjct: 1 MASGKELYCWGSTSHGQLG-------LGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTL 53
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSP 311
+ NG+VY G D +RP LI + Y
Sbjct: 54 FLTANGKVYACGSN--DHSQLGHELPTKRPLLIPELQDYV-------------------- 91
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
V Q+SCG +H+ A+SE G++L+WG + GQLGH D
Sbjct: 92 -----------VIQISCGSRHSLALSEWGQVLSWG------------DNDCGQLGHATDK 128
Query: 371 DYIH-PTIVNFGENVKALQVSCGFNHTGAL 399
+ + P +V + +Q++CG NH+ AL
Sbjct: 129 EIVQLPKVVRQLVSKTVVQIACGNNHSLAL 158
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 16/122 (13%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS-ESPVDQVSCGWKHTAAIS-EGK 340
+ SG ELY WGS +G LG+G I+ Q P++ ++ V QV+CG +HT ++ GK
Sbjct: 1 MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGK 60
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
+ G + HS QLGH ++ P ++ ++ +Q+SCG H+ AL
Sbjct: 61 VYACG---------SNDHS---QLGH--ELPTKRPLLIPELQDYVVIQISCGSRHSLALS 106
Query: 401 EY 402
E+
Sbjct: 107 EW 108
>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
Length = 369
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 114/226 (50%), Gaps = 16/226 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + + P R++G K VV I+ G A+ GE+Y+WG N NGQLGLG
Sbjct: 183 QVGSGSTVNQPI-PRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGS 241
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 242 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 293
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFGD 264
+S Y + E + + ++IAA H SA + G VY++G
Sbjct: 294 --KSNQSYPTPVTMEKDRI-IEIAACHSTHTSAAKTQGGHVYMWGQ 336
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 118/231 (51%), Gaps = 16/231 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQ 102
G G LGLG ++S P + + +L+ G G H + T G V+ G N + Q
Sbjct: 71 GTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQ 130
Query: 103 LGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + L P +IS K+V++++ G +HS +T DGE++ WG N++GQ+G G
Sbjct: 131 LG-NGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGST 189
Query: 161 AAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ PIP +V CL A G +AV G+V WG G+G+LG G
Sbjct: 190 VNQ--PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG------- 240
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
S ++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++
Sbjct: 241 --SSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL 289
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 154/368 (41%), Gaps = 67/368 (18%)
Query: 45 NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
+GD G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 9 SGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
G N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+
Sbjct: 69 VLGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNA 127
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QLG G ++P LS + A G S+ +T G+V +WG SG++G
Sbjct: 128 YSQLGNGTTNHGLVPCQISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G + ++ PR + + C+ V I A +M
Sbjct: 187 GS---------TVNQPIPRRV-----------------TGCLQNKVVVTI----ACGQMC 216
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 331
+++ GE+Y WG N NG LG+GS +P RV V +V+CG+
Sbjct: 217 CM--------AVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAA-LQGIRVQRVACGYA 267
Query: 332 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 390
HT ++ EG++ WG +S GQLG GN + +PT V ++ +
Sbjct: 268 HTLVLTDEGQVYAWG------------ANSYGQLGTGNKSNQSYPTPVTMEKDRIIEIAA 315
Query: 391 CGFNHTGA 398
C HT A
Sbjct: 316 CHSTHTSA 323
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 112/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ LSG K A+L + V T
Sbjct: 62 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIASLSYGSGPHIVLATTE 117
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L + ++ + + + E+ A G HS
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEV--------ACGSYHSL---- 165
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 166 --------------------------VLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG A+ + G++ WG+ G+ GQLG G+ +
Sbjct: 200 GCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLGLGSSGNQPT 247
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTD 274
>gi|293344078|ref|XP_001080802.2| PREDICTED: secretion-regulating guanine nucleotide exchange factor
[Rattus norvegicus]
gi|293355949|ref|XP_344892.4| PREDICTED: secretion-regulating guanine nucleotide exchange factor
[Rattus norvegicus]
gi|149055831|gb|EDM07262.1| similar to Gnefr protein (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 450
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 178/410 (43%), Gaps = 78/410 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG E P S F K +K++ GG H++ +T+ G ++ GLN G
Sbjct: 20 WGANSYGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGGHSVVVTDGGGLFVCGLNKDG 79
Query: 102 QLGISENIGYSLEPLRISGLKK----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG +G++ E LR + K + Q++ G+ + +T G++ G N+ GQLG+
Sbjct: 80 QLG----LGHTEEVLRFTICKPLLGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGV 135
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSG-RLGHGQE 214
K + +P +ECL AA G ++A T G WG G SG RL GQ
Sbjct: 136 PHGPRKCV-VPQAIECLREKVVCVAA-GLRHALATTDTGSTFQWGTGLASSGRRLCPGQN 193
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG----------- 263
+ FL + P + LE V A AG HSA + + G +Y++G
Sbjct: 194 LPL--FLTAKE---PSRVTGLESSTVVCAVAGSDHSASLTDTGELYVWGRNKHGQLASLA 248
Query: 264 -----DRAVDKMLFQEGNHARRPSLISG----------GELYTWGSNENGCLGI------ 302
+ V+ FQ+ + ++ SG G+++TWG + G LG
Sbjct: 249 TFLPLPQRVEAHYFQD---EKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRTLGSPE 305
Query: 303 ----GSIDVLHSPERVQGPFSESPVD------QVSCGWKHTAAISEGKILTWGWGGSHGT 352
G D + +R+Q SP+ +VSCG +H A+ K +WGW
Sbjct: 306 AQKHGEQDSSLAFQRLQNSVP-SPLHCLTGAAEVSCGSEHNLAVIRDKCCSWGW------ 358
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVN-FGENVKALQVSCGFNHTGALLE 401
+ G G G + + PT V + L V CG H+ AL +
Sbjct: 359 ------NEHGMCGDGTESNVWTPTPVQALPSPSRLLLVGCGAGHSLALCQ 402
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 134/291 (46%), Gaps = 54/291 (18%)
Query: 92 VYATGLNDFGQLGI--SENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMW 147
++A G N +GQLG+ E++ L P ++S K + ++ G HS +T G L++
Sbjct: 17 LFAWGANSYGQLGLGHKEDV---LLPQQLSDFCKSGCIKSVTGGGGHSVVVTDGGGLFVC 73
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G N +GQLGLG +V+ T + L G +Q A G++ ++ +T G+VLS G+ G
Sbjct: 74 GLNKDGQLGLG-HTEEVLRF-TICKPLLGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFG 131
Query: 208 RLG--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD- 264
+LG HG ++ P+ I+ L KV AAG H+ + G + +G
Sbjct: 132 QLGVPHGPRKCVV----------PQAIECLR-EKVVCVAAGLRHALATTDTGSTFQWGTG 180
Query: 265 -RAVDKMLFQEGN-----HARRPSLISG----------------------GELYTWGSNE 296
+ + L N A+ PS ++G GELY WG N+
Sbjct: 181 LASSGRRLCPGQNLPLFLTAKEPSRVTGLESSTVVCAVAGSDHSASLTDTGELYVWGRNK 240
Query: 297 NGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE-GKILTWG 345
+G L L P+RV+ F + V V GW H A +E GK+ TWG
Sbjct: 241 HGQLA-SLATFLPLPQRVEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWG 290
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 61/147 (41%), Gaps = 18/147 (12%)
Query: 42 LWGNGDYGRLG-LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+WG +G+L L + + V F+ + A+ G H + TETG V+ G D+
Sbjct: 235 VWGRNKHGQLASLATFLPLPQRVEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADY 294
Query: 101 GQLGIS------ENIGYSLEPLRISGLKKEV----------VQISTGYHHSSAITVDGEL 144
GQLG + + G L L+ V ++S G H+ A+ D +
Sbjct: 295 GQLGRTLGSPEAQKHGEQDSSLAFQRLQNSVPSPLHCLTGAAEVSCGSEHNLAVIRD-KC 353
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKV 171
WG N +G G G ++ P P +
Sbjct: 354 CSWGWNEHGMCGDGTESNVWTPTPVQA 380
>gi|55832768|gb|AAV66897.1| truncated HERC6 [Homo sapiens]
Length = 322
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 119/242 (49%), Gaps = 8/242 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LI 284
L+
Sbjct: 281 LV 282
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 139/326 (42%), Gaps = 69/326 (21%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
A G H+L L V + G N GQLG G EP I L+ +V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G + ++ P K+ L+ I Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS
Sbjct: 146 DSQVFSWGKNSHGQLGLGKE--------FPSQASPQRVRSLEGIPLAQVAAGGAHSF--- 194
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
+L G + WGSN G L + +V P +
Sbjct: 195 ---------------------------ALSLCGTSFGWGSNSAGQLALSGRNV---PVQS 224
Query: 315 QGPFSESPVDQ-----VSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
P S + +SCG HTA +++ GK+ T+G D S GQLG+
Sbjct: 225 NKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFG----------DNRS--GQLGYSP 272
Query: 369 DVDYIHPTIVNFGENVKAL--QVSCG 392
+ P +V E + L Q+ CG
Sbjct: 273 TPEKRGPQLV---ERIDGLVSQIDCG 295
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 123/282 (43%), Gaps = 56/282 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L +K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G HS + ++ +V ++WG N +G LG+G
Sbjct: 134 SCGHYHSLALSKDSQV------------------------------FSWGKNSHGQLGLG 163
Query: 304 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
SP+RV+ P+ QV+ G H+ A+S ++GWG +S G
Sbjct: 164 KEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLCGT-SFGWGS----------NSAG 211
Query: 363 QL---GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QL G V P V +N+ + +SCG HT L +
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQ 253
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
+ G P+L++ ++G+ +I
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQI 292
>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
Length = 1058
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 162/365 (44%), Gaps = 54/365 (14%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+LGLG +E P +++ ++CG HTLFLT TG VYA G ND+
Sbjct: 10 WGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYACGSNDY 69
Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + P I L+ V +QIS G HS A++ G++ WG N GQLG
Sbjct: 70 SQLGHDLP---TKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHAT 126
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +++ +P V L Q A G S+A+T G++ SWG+ G+LG + +
Sbjct: 127 E-KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL-- 183
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHA 278
T P + L G+ + A G HS I ++G V+ +G ++ L E N A
Sbjct: 184 ----THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRA 239
Query: 279 RRPSLIS-----------GGELYTWGSNENGCL------------GIGSIDVLHSPERVQ 315
L + G E + +NE G G S ++L R+
Sbjct: 240 YPTQLKTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEML---PRMV 296
Query: 316 GPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
S + QV+CG +HT A S GK+ +G G S GQLG + +
Sbjct: 297 MELMGSTITQVACGNRHTLAFVPSRGKVYAFGLG------------SSGQLGTRSTKSLM 344
Query: 374 HPTIV 378
P +V
Sbjct: 345 LPQVV 349
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 131/299 (43%), Gaps = 36/299 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ DY +LG L ++ RP + + + + ++CG H+L L++ G V + G ND GQL
Sbjct: 65 GSNDYSQLG-HDLPTK-RPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQL 122
Query: 104 G-ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G +E L + + K VVQI+ G +HS A+T GELY WG N GQLG+
Sbjct: 123 GHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPND 182
Query: 163 KV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P ++ L GI A G S ++ G V WG G+LG E
Sbjct: 183 LTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDE------- 235
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRAVD 268
T+ P +K L + V+ AA G S + G V+ G + +
Sbjct: 236 --TNRAYPTQLKTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 293
Query: 269 KMLFQE----------GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
+M+ + GN + S G++Y +G +G LG S L P+ V GP
Sbjct: 294 RMVMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLGSSGQLGTRSTKSLMLPQVVIGP 352
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 115/260 (44%), Gaps = 49/260 (18%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P ++ +Q + G ++ +T GKV + G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYACG 65
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ +LGH + P+LI EL+ + + G HS + + G+V +
Sbjct: 66 SNDYSQLGHDLPTK-----------RPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSW 114
Query: 263 GDR-------AVDKMLFQEGNHARR----------------PSLISGGELYTWGSNENGC 299
GD A +K + Q R+ +L S GELY+WGSN G
Sbjct: 115 GDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQ 174
Query: 300 LGIGSI-DVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 356
LG+ S D+ H P R+ P+ ++CG H+ IS+ + +GW
Sbjct: 175 LGVNSPNDLTHCNYPLRLTTLLG-IPLAAIACGGNHSFLISKSGAV-FGW---------- 222
Query: 357 GHSSGGQLGHGNDVDYIHPT 376
G ++ GQLG ++ + +PT
Sbjct: 223 GRNNCGQLGLNDETNRAYPT 242
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 14/118 (11%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS-ESPVDQVSCGWKHTAAISEGKI 341
+ SG ELY WGS +G LG+G I+ Q P++ ++ V QVSCG +HT ++
Sbjct: 1 MASGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLT---- 56
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ G G + QLGH D+ P ++ ++ +Q+SCG H+ AL
Sbjct: 57 -------ATGKVYACGSNDYSQLGH--DLPTKRPQLIPELQDYVIIQISCGSRHSLAL 105
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 83/210 (39%), Gaps = 54/210 (25%)
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+ G ++ WG+ G+LG LG + TPR I V+ + G H+
Sbjct: 1 MASGKELYCWGSTSHGQLG-------LGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTL 53
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSP 311
+ G+VY G ++ +RP LI + Y
Sbjct: 54 FLTATGKVYACGSNDYSQL--GHDLPTKRPQLIPELQDYV-------------------- 91
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+ Q+SCG +H+ A+S+ G++L+WG + GQLGH +
Sbjct: 92 -----------IIQISCGSRHSLALSDWGQVLSWG------------DNDCGQLGHATEK 128
Query: 371 DYIH-PTIVNFGENVKALQVSCGFNHTGAL 399
+ + P +V + +Q++CG NH+ AL
Sbjct: 129 EIVQLPKVVRQLVSKTVVQIACGNNHSLAL 158
>gi|348567198|ref|XP_003469388.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Cavia porcellus]
Length = 780
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 158/345 (45%), Gaps = 50/345 (14%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G + + + + ++G+ ++G+LGLGS +P A +
Sbjct: 28 SKFWFKNDIPMYLSCGDEHTAVVTGNNKLY--MFGSNNWGQLGLGSKSDVKKPTCVKALK 85
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQ 127
++ ACG HTL LT G VYA G N+ GQLG+ + + RIS E + Q
Sbjct: 86 PEKVQFAACGRNHTLILTVVGNVYAAGGNNEGQLGLGDTEERNTF-HRISFFTSEHNIKQ 144
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
+S G + S+A++ DG L+MWG NS GQ+GL + +P + G + G+
Sbjct: 145 LSAGSNTSAALSEDGRLFMWGDNSEGQIGLNDVISVCVPHQVNI----GKPISWISCGYY 200
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
S VT G++ ++G SG+LG +E I + TP+L+ + +++A G
Sbjct: 201 HSAFVTMDGELYTFGEPESGKLGLPKELLI-------NHRTPQLVAGIPEKVIQVACGG- 252
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDV 307
G + ++AV YT+G + G LG+G+
Sbjct: 253 ---------GHTVVLTEKAV----------------------YTFGLGQFGQLGLGTFCF 281
Query: 308 LHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 351
+V + +SCG HTA IS+ G + T+G G HG
Sbjct: 282 ETLEPKVIEQIKNQKITYISCGENHTALISDIGLMYTFG-DGRHG 325
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 156/343 (45%), Gaps = 57/343 (16%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
G + ++G V+ FG+ +EN+ P + + +S G H++ +T
Sbjct: 2 GEPETLVPDSGAVFT-----FGKTKFAENM-----PSKFWFKNDIPMYLSCGDEHTAVVT 51
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
+ +LYM+G N+ GQLGLG K+ + PT V+ L + AA G ++ +T G V
Sbjct: 52 GNNKLYMFGSNNWGQLGLGSKSD--VKKPTCVKALKPEKVQFAACGRNHTLILTVVGNVY 109
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
+ G G+LG G F R + + IK+L +AG SA + E+GR+
Sbjct: 110 AAGGNNEGQLGLGDTEERNTFHRISFFTSEHNIKQL--------SAGSNTSAALSEDGRL 161
Query: 260 YIFGDRA---------VDKMLFQEGNHARRPSLIS-----------GGELYTWGSNENGC 299
+++GD + + + + N + S IS GELYT+G E+G
Sbjct: 162 FMWGDNSEGQIGLNDVISVCVPHQVNIGKPISWISCGYYHSAFVTMDGELYTFGEPESGK 221
Query: 300 LGIGSIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 357
LG+ +++ +P+ V G V QV+CG HT ++E + T+G G
Sbjct: 222 LGLPKELLINHRTPQLVAG--IPEKVIQVACGGGHTVVLTEKAVYTFGLG---------- 269
Query: 358 HSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGAL 399
GQLG G + + P ++ +N K +SCG NHT +
Sbjct: 270 --QFGQLGLGTFCFETLEPKVIEQIKNQKITYISCGENHTALI 310
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G+G +G+LGLG + +++ P++CS F + +++ +ACGG TL + G NDF
Sbjct: 319 FGDGRHGKLGLGLENFSNQFFPILCSEFLRFTVQLVACGGCQTLVFAAPR-IDVVGENDF 377
Query: 101 GQLG 104
Q+
Sbjct: 378 NQIN 381
>gi|58533115|gb|AAW78912.1| putative chromosome condensation factor [Triticum turgidum]
Length = 882
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 156/373 (41%), Gaps = 72/373 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E P + + ++ +ACG HT +T TG +Y G ++
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++G+ + P RISG + ++ +S G H++ IT G+L+ +G S G LG G
Sbjct: 161 GLLGHGTDVGHWI-PRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALG-----------FEQSVAVTGGGKVLSWGAGGSG 207
K I P +VE LSG+ T A G QS A GK+ +WG G
Sbjct: 220 D--LKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKH 277
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + + L P + L A G + + +G+V+ G+
Sbjct: 278 RLGHGDKEARL---------KPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVY 328
Query: 268 DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
G+L S+ CL V+ + V Q++
Sbjct: 329 -------------------GQLGNLNSDGRPCL-------------VEDKIASEHVLQIA 356
Query: 328 CGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG H A + S ++ TWG G + G+LGHG+ D PT V +
Sbjct: 357 CGSYHVAVLTSRSEVFTWGKGAN------------GRLGHGDIEDRKVPTTVEALRDRAV 404
Query: 387 LQVSCGFNHTGAL 399
++CG N T A+
Sbjct: 405 RHIACGANFTAAI 417
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 126/301 (41%), Gaps = 70/301 (23%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H+S +T +GE++ WG++S G+LG G + V P VE
Sbjct: 69 KPLE-SNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG + + PR
Sbjct: 126 LAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTD---------VGHWIPRR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
I LEG+++ + G H+A I G+++ FGD +
Sbjct: 177 ISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSF----------------------- 213
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------------ 338
G LG G + + P V+ S V+CG HTAAI E
Sbjct: 214 -------GVLGHGDLKSISCPREVES-LSGLKTIAVACGVWHTAAIVEVIVTQSSATVSA 265
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
GK+ TWG G H +LGHG+ + PT V + +V+CG + T
Sbjct: 266 GKLFTWGDGDKH------------RLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVG 313
Query: 399 L 399
L
Sbjct: 314 L 314
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 116/276 (42%), Gaps = 69/276 (25%)
Query: 142 GELYMWGK---------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
G++Y+WG+ +S+ + K ++P P + + ++ G + V
Sbjct: 35 GDVYVWGEVVCDNSARTSSDTVIRSTGKTDFLLPKPLESNLVLDVY--HVDCGVRHASLV 92
Query: 193 TGGGKVLSWGAGGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
T G+V +WG GRLGHG +E S+ PRL++ L + A G H+
Sbjct: 93 TRNGEVFTWGEDSGGRLGHGTREDSV----------HPRLVESLAACNIDFVACGEFHTC 142
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWG--SNENGCLGIGSIDVLH 309
+ + GELYTWG ++ G LG G+ DV H
Sbjct: 143 AV------------------------------TTTGELYTWGDGTHNVGLLGHGT-DVGH 171
Query: 310 -SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
P R+ GP + VSCG HTA I S G++ T+G G S G LGHG
Sbjct: 172 WIPRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDG------------SFGVLGHG 219
Query: 368 NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
+ P V +K + V+CG HT A++E +
Sbjct: 220 DLKSISCPREVESLSGLKTIAVACGVWHTAAIVEVI 255
>gi|440898467|gb|ELR49962.1| RCC1 and BTB domain-containing protein 1 [Bos grunniens mutus]
Length = 531
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 139/301 (46%), Gaps = 49/301 (16%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
L P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
TP V++AA LHS C+++ + G +A +L
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ----IVCG-------------YAHTLALTDE 251
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTW 344
G LY WG+N G LG G+ + L SP + E ++ +C HT+A G + W
Sbjct: 252 GLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVIEIAACHSAHTSAAKTQGGHVYMW 310
Query: 345 G 345
G
Sbjct: 311 G 311
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V ++IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-IEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 141/313 (45%), Gaps = 53/313 (16%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T E++++G N + LG G + + +P K+E
Sbjct: 13 LSPHEIASIRKACV-FGTSANEALYVTDSDEVFVFGLNYSSCLGTGDNHSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + L ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V A G HS + +G V+ +G ++ G+ A +P+
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV S V+Q+
Sbjct: 180 IKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG ++ GQLG GN + + P + E +
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHI-MVEKERV 286
Query: 387 LQV-SCGFNHTGA 398
+++ +C HT A
Sbjct: 287 IEIAACHSAHTSA 299
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
LG + N L P I K+ V++I+ + H S+A T G +YMWG+
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQ 312
>gi|301117544|ref|XP_002906500.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107849|gb|EEY65901.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 4048
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 162/386 (41%), Gaps = 61/386 (15%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G +YG L LG S + F ++ +A G + G V+ GLN GQ
Sbjct: 470 GQNNYGELCLGHCNSTSKLEHVPFFSAKGIRDVAGGNEVLAVVMNDGGVFTCGLNKSGQC 529
Query: 104 G---ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G E + + +SG+ +V + G H A+ DG ++ WG N GQLGLG
Sbjct: 530 GNGTFEERVIIATPVRALSGIAISMVAAANGCEHMLAVASDGAVFSWGYNDRGQLGLGST 589
Query: 161 AAKVIPIPTKVECLSGIF-TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--HGQESSI 217
+K P ++ L + AA+ + S V+ G++L++G G+LG H Q
Sbjct: 590 ISKSH-TPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDCGQLGLDHTQH--- 645
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
++TP+++ L V AA G H+ +G VY FG ++ +
Sbjct: 646 --------QHTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLGHARN 697
Query: 278 ARRPSLI-------------------------SGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ P+L+ G+L TWG N+ G LGIGS + +S +
Sbjct: 698 IKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKEHKNSAQ 757
Query: 313 RVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG---- 367
V P S S + SCG H+ + S G+++ + G ++ GQLG G
Sbjct: 758 FVPLPMS-SKIKNASCGCYHSLILMSNGRVMVF------------GRNNKGQLGAGARTL 804
Query: 368 NDVDYIHPTIVNFGENVKALQVSCGF 393
+ D P N N + ++++ GF
Sbjct: 805 SSADLPLPVPSNSLANDEVVRIAAGF 830
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 148/338 (43%), Gaps = 51/338 (15%)
Query: 92 VYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
+++ G N++G+L + N LE + K + ++ G + + DG ++ G N
Sbjct: 466 LFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKG-IRDVAGGNEVLAVVMNDGGVFTCGLN 524
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AALGFEQSVAVTGGGKVLSWGAGGSGR 208
+GQ G G +VI I T V LSGI AA G E +AV G V SWG G+
Sbjct: 525 KSGQCGNGTFEERVI-IATPVRALSGIAISMVAAANGCEHMLAVASDGAVFSWGYNDRGQ 583
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LG G S+I + +TPR+I L E + AA + HSA + NG + FG
Sbjct: 584 LGLG--STI------SKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDC 635
Query: 268 DKMLFQEGNHARRPSLI----------------------SGGELYTWGSNENGCLGIGSI 305
++ H P ++ S GE+Y++G N+ G LG+G
Sbjct: 636 GQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLGHA 695
Query: 306 DVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 362
+ +P V+ ES + VSCG+ HT ISE GK++TWG + G
Sbjct: 696 RNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWG------------RNDYG 743
Query: 363 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
QLG G+ V + K SCG H+ L+
Sbjct: 744 QLGIGSKEHKNSAQFVPLPMSSKIKNASCGCYHSLILM 781
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 120/227 (52%), Gaps = 18/227 (7%)
Query: 43 WGNGDYGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG D G+LGLGS +S ++ S EK+ + A H+ ++ G + G+ND
Sbjct: 576 WGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDC 635
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+ ++ + P + L +VV + + G +H+ A T DGE+Y +GKN GQLGLG
Sbjct: 636 GQLGL-DHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLGH 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
A+ I P V+ G ++ + G+ +V ++ GK+++WG G+LG G +
Sbjct: 695 --ARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKEH 752
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++++++ P + K+K A+ G HS + NGRV +FG
Sbjct: 753 -----KNSAQFVPLPMSS----KIKNASCGCYHSLILMSNGRVMVFG 790
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 107/234 (45%), Gaps = 27/234 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G D G+LGL + + P V A + ACG HT+ T G VY+ G ND+GQ
Sbjct: 630 FGMNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQ 689
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG- 158
LG+ L + L +++V +S GY+H+ I+ G+L WG+N GQLG+G
Sbjct: 690 LGLGHARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGS 749
Query: 159 ---KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
K +A+ +P+P + K A+ G S+ + G+V+ +G G+LG G +
Sbjct: 750 KEHKNSAQFVPLPMSSK------IKNASCGCYHSLILMSNGRVMVFGRNNKGQLGAGART 803
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
L S P L +V AAGF S YI R+ D
Sbjct: 804 -----LSSADLPLPVPSNSLANDEVVRIAAGFYSS---------YILTGRSSDN 843
>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
scrofa]
Length = 568
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 115/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 140 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 199
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++G K VV I+ G S A+ GE+Y+WG N NGQLGLG
Sbjct: 200 QVGSGSTANQPI-PRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS 258
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P ++ L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 259 GGNQ--PTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 310
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y +I E + + ++IAA H SA + G VY++G
Sbjct: 311 --KSNQSYPTPVIVEKDRI-IEIAACHSAHTSAAKTQGGHVYMWG 352
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 113/219 (51%), Gaps = 16/219 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 93 GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLG-NG 151
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 152 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 209
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G
Sbjct: 210 PIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------GG 260
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++ TP I L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 261 NQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 299
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 146/347 (42%), Gaps = 60/347 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 47 KWPIFSLCSEEELQLVRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 105
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 106 PRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 165
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 166 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 215
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW 292
+ C+ V I A +M +++ GE+Y W
Sbjct: 216 -----------------TGCLQNKTVVNI----ACGQMCSM--------AVVDTGEVYVW 246
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 351
G N NG LG+GS +P R+ V +V+CG+ HT ++ EG++ WG
Sbjct: 247 GYNGNGQLGLGSGGNQPTPCRI-AALQGIRVQRVACGYAHTLVLTDEGQVYAWG------ 299
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 300 ------ANSYGQLGTGNKSNQSYPTPVIVEKDRIIEIAACHSAHTSA 340
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 111/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ LSG K A L + V T
Sbjct: 79 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIACLSYGSGPHVVLATTE 134
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 135 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLV--- 183
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 184 ---------------------------LTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 216
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG + A+ + G++ WG+ G+ GQLG G+ +
Sbjct: 217 GCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGN------------GQLGLGSGGNQPT 264
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P + + ++ +V+CG+ HT L +
Sbjct: 265 PCRIAALQGIRVQRVACGYAHTLVLTD 291
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 245 VWGYNGNGQLGLGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 304
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
QLG S P + K +++I+ + H S+A T G +YMWG+
Sbjct: 305 QLGTGNKSNQSY-PTPVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ 353
>gi|90399178|emb|CAJ86040.1| H0723C07.10 [Oryza sativa Indica Group]
Length = 1082
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 150/337 (44%), Gaps = 50/337 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ S ++P + + +++ +ACG HT +T TG +Y G ++
Sbjct: 310 WGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEFHTCAITATGDLYTWGDGTHNA 369
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG N+ + + P R+SG + +V +S G H++ IT G+LY +G + G LG G
Sbjct: 370 GLLGHGSNVSHWI-PKRVSGPLEGLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHG 428
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV---------TGGGKVLSWGAGGSGRL 209
+ + I P +VE L G+ T + G + AV T GK+ +WG G RL
Sbjct: 429 NR--ETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRL 486
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG SS L P + L A G + + +G ++ G +V
Sbjct: 487 GHGDRSSKL---------KPTCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGS-SVYG 536
Query: 270 MLFQEGNHARRPSLI-----------------------SGGELYTWGSNENGCLGIGSID 306
L N R P L+ GE+YTWG NG LG G I
Sbjct: 537 QLGNPNNDGRYPRLVEEKLGGGGVVEVVCGAYHVAVLTQSGEVYTWGKGANGRLGHGDIA 596
Query: 307 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 343
+P V+ + V +++CG TAAI + K ++
Sbjct: 597 DRKTPTFVEA-LRDRSVKRIACGSGFTAAICQHKSVS 632
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 118/272 (43%), Gaps = 60/272 (22%)
Query: 142 GELYMWG--------KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G++Y+WG + + AA I +P +E + A G + + VT
Sbjct: 243 GDVYVWGEVMCDTTCRQGSDSNAYSATAATDILVPKPLESNVMLDVSYVACGVKHAALVT 302
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
+V +WG SGRLGHG +SI + PRL++ L V+ A G H+ I
Sbjct: 303 RQAEVFTWGEECSGRLGHGAGTSI---------FQPRLVESLSICNVETIACGEFHTCAI 353
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH-SPE 312
G +Y +GD G++ G LG GS +V H P+
Sbjct: 354 TATGDLYTWGD----------------------------GTHNAGLLGHGS-NVSHWIPK 384
Query: 313 RVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
RV GP V VSCG HTA I S GK+ T+G GTF G LGHGN
Sbjct: 385 RVSGPLEGLQVSAVSCGTWHTALITSSGKLYTFG----DGTF--------GVLGHGNRET 432
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
+P V + ++ + VSCG HT A++E +
Sbjct: 433 ISYPKEVESLKGLRTISVSCGVWHTAAVVEVI 464
>gi|224135109|ref|XP_002327568.1| predicted protein [Populus trichocarpa]
gi|222836122|gb|EEE74543.1| predicted protein [Populus trichocarpa]
Length = 973
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 166/392 (42%), Gaps = 82/392 (20%)
Query: 34 TLQRRFAAL---------WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
+L R+ AAL WG G G+LG P + + + +K++ACG T
Sbjct: 311 SLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPKMVESLDGVHVKSVACGEYQTC 370
Query: 85 FLTETGCVYATGLNDFG-QLGISENIGYSLEPLRISGLKKEV--VQISTGYHHSSAITVD 141
LT++G +YA G N +G LG E P RISG V + ++ G H++ ++
Sbjct: 371 ALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGVCILNVACGDWHTAIVSSS 430
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG------- 194
G+L+ +G S G LG G + + P +VE L G+ K A G + A+
Sbjct: 431 GQLFTYGDGSFGVLGHGNLLS--VSQPKEVESLKGLLVKSVACGSWHTAAIVDIIVDRFK 488
Query: 195 ----GGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
GGK+ +WG G GRLGH E +L P + +L + + G +
Sbjct: 489 FNGVGGKLFTWGDGDKGRLGHADLEKKLL----------PTCVAQLVELDFDQVSCGRML 538
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGN-HARRPSLISGGELYTWGSNENGCLGIGSIDVL 308
+ + G+VY G ++ GN HA+ S++
Sbjct: 539 TVALTNTGKVYTMGSSVHGQL----GNPHAKDKSIVI----------------------- 571
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
V+G E V ++S G H AA+ S G + TWG G + GQLG G
Sbjct: 572 -----VEGKLKEEFVKEISSGSYHVAALTSSGSLYTWGKG------------TNGQLGLG 614
Query: 368 NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
N D PT+V +++ ++CG N T A+
Sbjct: 615 NVEDRNFPTLVEALRDMQVQSIACGSNLTAAI 646
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 134/312 (42%), Gaps = 48/312 (15%)
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
GCV N FG ++ + L L S + +V IS G H++ IT GE++ WG+
Sbjct: 277 GCVD----NQFGYHN-TKQVDALLPKLLESTVMLDVTNISLGRKHAALITKRGEVFCWGE 331
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG-R 208
S G+LG K + P VE L G+ K A G Q+ A+T G++ +WG G
Sbjct: 332 GSRGKLG--HKVDMDVSSPKMVESLDGVHVKSVACGEYQTCALTDSGELYAWGENKYGAN 389
Query: 209 LGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LG + RS S++ PR I L GV + A G H+A +
Sbjct: 390 LGCEE--------RSRSQWLPRRISGPLTGVCILNVACGDWHTAIVS------------- 428
Query: 268 DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
S G+L+T+G G LG G++ + P+ V+ V V+
Sbjct: 429 -----------------SSGQLFTYGDGSFGVLGHGNLLSVSQPKEVES-LKGLLVKSVA 470
Query: 328 CGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 387
CG HTAAI + + + + G G G G+LGH + + PT V +
Sbjct: 471 CGSWHTAAIVDIIVDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPTCVAQLVELDFD 530
Query: 388 QVSCGFNHTGAL 399
QVSCG T AL
Sbjct: 531 QVSCGRMLTVAL 542
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 101/241 (41%), Gaps = 56/241 (23%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + +LG + + +T G+V WG G G+LGH + +
Sbjct: 295 LPKLLESTVMLDVTNISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDV--------- 345
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
+P++++ L+GV VK A G + +L
Sbjct: 346 SSPKMVESLDGVHVKSVACGEYQTC------------------------------ALTDS 375
Query: 287 GELYTWGSNENGCLGIGSIDVLHS---PERVQGPFSESPVDQVSCGWKHTAAISE-GKIL 342
GELY WG N+ G +G + S P R+ GP + + V+CG HTA +S G++
Sbjct: 376 GELYAWGENKYGA-NLGCEERSRSQWLPRRISGPLTGVCILNVACGDWHTAIVSSSGQLF 434
Query: 343 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 402
T+G G S G LGHGN + P V + + V+CG HT A+++
Sbjct: 435 TYGDG------------SFGVLGHGNLLSVSQPKEVESLKGLLVKSVACGSWHTAAIVDI 482
Query: 403 V 403
+
Sbjct: 483 I 483
>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
CCMP2712]
Length = 277
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 140/310 (45%), Gaps = 46/310 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA----HTLFLTETGCVYATGLN 98
WG + G LGLG+ ++ P A + + ++ACGG H+ +TE G VY G
Sbjct: 3 WGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWGSG 62
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLG ++ L L + +V+++ G H+ ++ G ++ WG GQLG+G
Sbjct: 63 KSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQLGVG 122
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
P+ +V L G+ + A G + VT G V +WG G +G+LGHG ++
Sbjct: 123 STHNSNDPV--QVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDDA--- 177
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S+ P +K+L G+ V A G H+ + E DRAV
Sbjct: 178 ------SQSRPMYVKKLHGIYVSTLACGLAHTVVVSEV-------DRAV----------- 213
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-S 337
++WG +E G LG G D+ + + P + Q++CG +T A+ S
Sbjct: 214 -----------FSWGWDEYGQLGHGGWDIF-GGNKNRSPRPIKDLQQIACGSSYTLALSS 261
Query: 338 EGKILTWGWG 347
G + +GWG
Sbjct: 262 RGDVYAFGWG 271
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 109/262 (41%), Gaps = 59/262 (22%)
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG----FEQSVAVTGGGKVLS 200
+ WG N++G LGLG A P P + L G+ A G + S AVT G+V +
Sbjct: 1 FSWGFNNDGALGLGTTDAVGSPCP--IIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYT 58
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG+G SG+LGHG +++ PRLI L+ + A G H+ + + G V+
Sbjct: 59 WGSGKSGQLGHGDSQNLV---------LPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVF 109
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
WG G LG+GS + P +V
Sbjct: 110 ------------------------------AWGWGHFGQLGVGSTHNSNDPVQVT-SLDG 138
Query: 321 SPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
V +V+CG HTA ++E G + TWGWG GQLGHG+D P V
Sbjct: 139 VKVCKVACGSAHTAVVTESGHVYTWGWG------------VNGQLGHGDDASQSRPMYVK 186
Query: 380 FGENVKALQVSCGFNHTGALLE 401
+ ++CG HT + E
Sbjct: 187 KLHGIYVSTLACGLAHTVVVSE 208
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 15/175 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG+GS + PV ++ + + +ACG AHT +TE+G VY G GQ
Sbjct: 111 WGWGHFGQLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQ 170
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAIT-VDGELYMWGKNSNGQLGLG-- 158
LG ++ S P+ + L V ++ G H+ ++ VD ++ WG + GQLG G
Sbjct: 171 LGHGDDASQS-RPMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQLGHGGW 229
Query: 159 ---KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
P P K +Q A G ++A++ G V ++G G G+LG
Sbjct: 230 DIFGGNKNRSPRPIK-------DLQQIACGSSYTLALSSRGDVYAFGWGKDGQLG 277
>gi|380792689|gb|AFE68220.1| RCC1 and BTB domain-containing protein 1, partial [Macaca mulatta]
Length = 345
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 139/301 (46%), Gaps = 49/301 (16%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
TP V++AA LHS C+++ + G +A +L
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ----IVCG-------------YAHTLALTDE 251
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTW 344
G LY WG+N G LG G+ + L SP + E V+ +C HT+A G + W
Sbjct: 252 GLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMW 310
Query: 345 G 345
G
Sbjct: 311 G 311
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 115/226 (50%), Gaps = 16/226 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL- 274
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFGD 264
+P I + V+IAA H SA + G VY++G
Sbjct: 275 --------SPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 138/312 (44%), Gaps = 51/312 (16%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + +T D E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSASEALYVTDDDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
LSG K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 GLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V A G HS + +G V+ +G ++ G+ A +P+
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV S V+Q+
Sbjct: 180 IKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG ++ GQLG GN + + P + +
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHIMVEKERVV 287
Query: 387 LQVSCGFNHTGA 398
+C HT A
Sbjct: 288 EIAACHSAHTSA 299
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
>gi|357135039|ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832036 [Brachypodium
distachyon]
Length = 913
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 160/373 (42%), Gaps = 72/373 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E P + + ++ +ACG HT +T TG +Y G ++
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++G+ + P RISG + +V +S G H++ IT G+L+ +G S G LG G
Sbjct: 161 GLLGHGTDVGHWI-PRRISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
K I P +VE LSG+ T A G QS A GK+ +WG G
Sbjct: 220 N--VKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKH 277
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + + L P + L F AC
Sbjct: 278 RLGHGDKEARLN---------PTCVASLIDYD-------FYRVAC--------------- 306
Query: 268 DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
H+ L + G+++T G++ G LG + D P V + V QV+
Sbjct: 307 --------GHSLTVGLTTSGKVWTMGNSVYGQLGNPNSD--GRPCLVGDKITNEHVLQVA 356
Query: 328 CGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG H + + S ++ TWG G + G+LGHG+ D PT+V ++
Sbjct: 357 CGSYHVSVLTSRSEVFTWGKGAN------------GRLGHGDIEDQKVPTLVEALKDRSV 404
Query: 387 LQVSCGFNHTGAL 399
++CG N T A+
Sbjct: 405 RHIACGANFTAAI 417
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 127/301 (42%), Gaps = 70/301 (23%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H+S +T GE++ WG++S G+LG G + V P VE
Sbjct: 69 KPLE-SNLVLDVYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG + + PR
Sbjct: 126 LAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTD---------VGHWIPRR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
I LEG++V + G H+A I G+++ FGD +
Sbjct: 177 ISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSF----------------------- 213
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------------ 338
G LG G++ + P V+ S V+CG HTAAI E
Sbjct: 214 -------GVLGHGNVKSISCPREVES-LSGLKTIAVACGVWHTAAIVEVIVTQSSATVSA 265
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
GK+ TWG G H +LGHG+ ++PT V + +V+CG + T
Sbjct: 266 GKLFTWGDGDKH------------RLGHGDKEARLNPTCVASLIDYDFYRVACGHSLTVG 313
Query: 399 L 399
L
Sbjct: 314 L 314
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 115/276 (41%), Gaps = 69/276 (25%)
Query: 142 GELYMWGK---------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
G++Y+WG+ +S+ + K ++P P + + ++ G + V
Sbjct: 35 GDVYVWGEVVCDNSARTSSDTVIRSTGKTDFLLPKPLESNLVLDVY--HVDCGVRHASLV 92
Query: 193 TGGGKVLSWGAGGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
T G+V +WG GRLGHG +E S+ PRL++ L + A G H+
Sbjct: 93 TRSGEVFTWGEDSGGRLGHGTREDSV----------HPRLVESLAACNIDFVACGEFHTC 142
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWG--SNENGCLGIGSIDVLH 309
+ + GELYTWG ++ G LG G+ DV H
Sbjct: 143 AV------------------------------TTTGELYTWGDGTHNVGLLGHGT-DVGH 171
Query: 310 -SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
P R+ G V VSCG HTA I S G++ T+G G S G LGHG
Sbjct: 172 WIPRRISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDG------------SFGVLGHG 219
Query: 368 NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
N P V +K + V+CG HT A++E +
Sbjct: 220 NVKSISCPREVESLSGLKTIAVACGVWHTAAIVEVI 255
>gi|350418736|ref|XP_003491950.1| PREDICTED: hypothetical protein LOC100748540 [Bombus impatiens]
Length = 791
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 191/410 (46%), Gaps = 75/410 (18%)
Query: 2 LGRSLTA---MTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLES 58
+GRS A + +++++D L G + R F ++G+ D+G+LGLG
Sbjct: 18 IGRSRFADNVASHFFIRRDPVLSITCGDEHSAVICQTGRLF--VFGSNDWGQLGLGHKNH 75
Query: 59 RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLE-P 115
+P A + + +ACG AHTL T + ++A G + GQL GIS IG S+ P
Sbjct: 76 ISKPSCVKALKPERVTHVACGRAHTLICTGSQKIFACGSDQEGQLGRGISA-IGDSVNTP 134
Query: 116 LRI--SGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
+ + SGL ++VQI+ G HHS A+T DG ++ WG N GQLGL + ++ PTKV
Sbjct: 135 VLVYDSGLSGSKIVQIAAGSHHSLALTSDGGVFAWGSNLEGQLGL-PDVSGLVNKPTKVH 193
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
+ KQ + G+ S +T G V G SG+LG F +++ P+ +
Sbjct: 194 IPEPV--KQISAGYYHSTFLTESGLVYVCGESESGKLGID-----ASF---STQVAPKQM 243
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW 292
+L V +A G H+ + ENG LY
Sbjct: 244 -QLPSPAVHVACGGH-HTVILAENGN------------------------------LYCT 271
Query: 293 GSNENGCLGIGS-IDVLHSPERV-QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
GSN +G LG+G+ + LH P+ + +G + ++SCG HTA ++E GK+ T G G
Sbjct: 272 GSNSSGQLGLGTNLSELHIPKLLPRGMLRNETITRISCGESHTAVVTESGKLYTCG-DGR 330
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL---QVSCGFNHT 396
H G+LG + + +H + F + K L V+CG HT
Sbjct: 331 H-----------GKLGLEENENNVHE--LTFVQRYKELFVSDVACGGCHT 367
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 149/343 (43%), Gaps = 59/343 (17%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
+ ETG V+ G + F ++ + +P V+ I+ G HS+ I G L+
Sbjct: 9 IPETGAVFTIGRSRFAD-NVASHFFIRRDP---------VLSITCGDEHSAVICQTGRLF 58
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
++G N GQLGLG K I P+ V+ L A G ++ TG K+ + G+
Sbjct: 59 VFGSNDWGQLGLGHKNH--ISKPSCVKALKPERVTHVACGRAHTLICTGSQKIFACGSDQ 116
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKE--LEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LG G S +G S TP L+ + L G K+ AAG HS + +G V+ +G
Sbjct: 117 EGQLGRG--ISAIG----DSVNTPVLVYDSGLSGSKIVQIAAGSHHSLALTSDGGVFAWG 170
Query: 264 DRAVDKM-------LFQEGNHARRPS--------------LISGGELYTWGSNENGCLGI 302
++ L + P L G +Y G +E+G LGI
Sbjct: 171 SNLEGQLGLPDVSGLVNKPTKVHIPEPVKQISAGYYHSTFLTESGLVYVCGESESGKLGI 230
Query: 303 -GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSG 361
S +P+++Q P SP V+CG HT ++E +G G +S
Sbjct: 231 DASFSTQVAPKQMQLP---SPAVHVACGGHHTVILAE-----------NGNLYCTGSNSS 276
Query: 362 GQLGHGNDVDYIH-PTIVNFG--ENVKALQVSCGFNHTGALLE 401
GQLG G ++ +H P ++ G N ++SCG +HT + E
Sbjct: 277 GQLGLGTNLSELHIPKLLPRGMLRNETITRISCGESHTAVVTE 319
>gi|55725019|emb|CAH89377.1| hypothetical protein [Pongo abelii]
Length = 451
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 187
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + + P R++G K VV I+ G A+ GE+Y+WG N NGQLGLG
Sbjct: 188 QVGSGSTVNQPI-PRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN 246
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 247 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 298
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y + E + + ++IAA H SA + G VY++G
Sbjct: 299 --KSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 340
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 112/219 (51%), Gaps = 16/219 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 81 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 139
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 140 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 197
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 198 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG---------NSG 248
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++ TP + L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 249 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 138/323 (42%), Gaps = 56/323 (17%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSS 136
G L+ T ++ G N G LG+ + + ++EP R+ L K++ +S G H
Sbjct: 59 AGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIEPRRLDSLNGKKIACLSYGSGPHIV 117
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
T +GE++ WG N+ QLG G ++P LS + A G S+ +T G
Sbjct: 118 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDG 176
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+V +WG SG++G G + ++ PR + + C+
Sbjct: 177 EVFAWGYNNSGQVGSGS---------TVNQPIPRRV-----------------TGCLQNK 210
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
V I A +M +++ GE+Y WG N NG LG+G+ +P RV
Sbjct: 211 VVVTI----ACGQMCCM--------AVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAA 258
Query: 317 PFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
V +V+CG+ HT ++ EG++ WG +S GQLG GN + +P
Sbjct: 259 -LQGIRVQRVACGYAHTLVLTDEGQVYAWG------------ANSYGQLGTGNKSNQSYP 305
Query: 376 TIVNFGENVKALQVSCGFNHTGA 398
T V ++ +C HT A
Sbjct: 306 TPVTVEKDRIIEIAACHSTHTSA 328
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 233 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 292
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 293 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 345
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 346 --SVILPHLTHFSCTDDVF 362
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 110/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ L+G K A L + V T
Sbjct: 67 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLNG--KKIACLSYGSGPHIVLATTE 122
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 123 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLV--- 171
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 172 ---------------------------LTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 204
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG A+ + G++ WG+ G+ GQLG GN +
Sbjct: 205 GCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLGLGNSGNQPT 252
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 253 PCRVAALQGIRVQRVACGYAHTLVLTD 279
>gi|222623461|gb|EEE57593.1| hypothetical protein OsJ_07959 [Oryza sativa Japonica Group]
Length = 976
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 176/363 (48%), Gaps = 60/363 (16%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
++++ACG H +T+ G V++ G+++ G+LG ++ S +P I L V+ I+ G
Sbjct: 205 VQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVS-DPKIIESLASTRVKAIAFG 263
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGL-GKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
H+ A+++ GELY WG+ ++ LGL G + + P K+ L GI + A G +
Sbjct: 264 AKHTCAVSISGELYEWGEGTHC-LGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHT 322
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
++ G++ ++G G G LGHG ++ P+ ++ L+GV+ K A G H
Sbjct: 323 AIISSAGQLFAYGDGTFGVLGHGDTLTVA---------RPKQVESLKGVRAKAIACGPWH 373
Query: 250 SACIDE----------NGRVYIFGD--------------------RAVDKMLFQEGNHAR 279
+A I E +G+++ +GD ++ F + + A+
Sbjct: 374 TAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAK 433
Query: 280 RPSLI--SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
+++ G ++T GS E+G LG + S ++GP V ++S G H A ++
Sbjct: 434 AQTIVLTITGVVFTIGSKEHGRLG-NPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLT 492
Query: 338 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
GK+ TWG G + GQLG G+ VD +PT+V E+ + ++CGFN T
Sbjct: 493 MNGKVFTWGKG------------TEGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFT 540
Query: 397 GAL 399
A+
Sbjct: 541 MAI 543
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 120/290 (41%), Gaps = 58/290 (20%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+ L K+ + S G H + T ++++WG+ L G + + +P + I
Sbjct: 146 ITQLPKQ--KSSEGLHVAYGATSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHII 203
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+ A G + + VT G+V SWG GRLGH S S P++I+ L
Sbjct: 204 DVQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKV---------SVSVSDPKIIESLAS 254
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNEN 297
+VK A G H+ + GELY WG +
Sbjct: 255 TRVKAIAFGAKHTCAVS------------------------------ISGELYEWGEGTH 284
Query: 298 GCLGIGSIDVLHS---PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTF 353
CLG+ S P ++ GP + +++CG HTA IS G++ +G GTF
Sbjct: 285 -CLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYG----DGTF 339
Query: 354 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
G LGHG+ + P V + V+A ++CG HT A++E +
Sbjct: 340 --------GVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERM 381
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ D G+LG + + P ++C A T+ LT TG V+ G + G+
Sbjct: 396 WGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGR 455
Query: 103 LG--ISENIGYSLEPLRISG-LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
LG +SE+ L I G LK E V +IS+G H + +T++G+++ WGK + GQLGLG
Sbjct: 456 LGNPLSEDTSICL----IEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLG 511
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ PT VE L A GF ++A+
Sbjct: 512 DYVDR--SYPTLVEALEDKQVHSIACGFNFTMAI 543
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 128/311 (41%), Gaps = 63/311 (20%)
Query: 43 WGNGDY--GRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG G + G G S+W P + + S+ +ACG HT ++ G ++A G
Sbjct: 279 WGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYGDGT 338
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAIT----------VDGELYMWG 148
FG LG + + + P ++ LK I+ G H++AI G+L+ WG
Sbjct: 339 FGVLGHGDTLTVA-RPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWG 397
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
G+LG K K+ +PT VE L+ Q + Q++ +T G V + G+ GR
Sbjct: 398 DADRGKLGHADKKMKL--VPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGR 455
Query: 209 LGH--GQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
LG+ +++SI LI+ L+ V+ ++G H A + NG+V
Sbjct: 456 LGNPLSEDTSIC------------LIEGPLKTEFVREISSGSSHIAVLTMNGKV------ 497
Query: 266 AVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 325
+TWG G LG+G P V+ + V
Sbjct: 498 ------------------------FTWGKGTEGQLGLGDYVDRSYPTLVEA-LEDKQVHS 532
Query: 326 VSCGWKHTAAI 336
++CG+ T AI
Sbjct: 533 IACGFNFTMAI 543
>gi|302760337|ref|XP_002963591.1| hypothetical protein SELMODRAFT_404893 [Selaginella moellendorffii]
gi|300168859|gb|EFJ35462.1| hypothetical protein SELMODRAFT_404893 [Selaginella moellendorffii]
Length = 420
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 189/437 (43%), Gaps = 87/437 (19%)
Query: 24 LGICKRWISSTLQRRF--AALWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALA 77
+G+ +R + L R F AA++ GD LG S + P S+ +A
Sbjct: 2 IGLARR--RNVLGRAFHTAAVYSFGDGSNGALGHPHSFTNDSFEPAAVPGLPP-SIARVA 58
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENI---GYSLEPLRISGLKKEVVQISTGYHH 134
CG H+L L+ +G ++A G N+ GQLG E ++ P R+ G++ V+ + G
Sbjct: 59 CGHYHSLALSRSGELWAWGRNNEGQLGRGEKSILSAATITPQRVRGMESTRVRAAAGSGV 118
Query: 135 -SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
S AI DG L+ WG + GQLGLG + +P K+ L+G Q +LG+ ++A T
Sbjct: 119 VSMAICEDGSLWSWGSSKRGQLGLGLGVTSSL-LPQKIHALAGKSVLQVSLGWGHALACT 177
Query: 194 GGGKVLSWGAGGSGRLG-------------------HGQ--ESSILGFLRSTS----EYT 228
G++ SWG SGRLG H E ++ LR ++
Sbjct: 178 MDGELFSWGYHDSGRLGYLLPQDQTLMIQPSKDSLDHNDVGEKMLMEQLRKEDAPILQWE 237
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGE 288
P+L+K E K+ A G HS + E+G ++ FGD + ++ + + S + GG+
Sbjct: 238 PKLVKLPEPSKIVQVACGLDHSLALSESGLLFSFGDNSTAQLGRETTEDSPIISRV-GGD 296
Query: 289 L-------------------------YTWGSNENGCLGIGSIDVLHSPERVQGPFSE--S 321
L YTWG + LG P V E
Sbjct: 297 LEGKQVVAIGAGWGHSLAVERCSRAAYTWGWSSGSQLG------RSGPSSVPKQLEELDD 350
Query: 322 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-N 379
PV V+ G H+ A+ S+ ++ TWG G G+LG G+ D P +V +
Sbjct: 351 PVVSVAGGRVHSLALTSKHQVWTWGCG------------RNGRLGLGSSRDENLPVLVES 398
Query: 380 FGENVKALQVSCGFNHT 396
E+ + + V CG++H+
Sbjct: 399 LEEHAEVIDVCCGYDHS 415
>gi|426344974|ref|XP_004039178.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Gorilla
gorilla gorilla]
Length = 982
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 142/309 (45%), Gaps = 42/309 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGTHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P I L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGYSPTPEKRGPQ 280
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
L+ ER+ G V Q+ CG HT A + G+
Sbjct: 281 LV---------------------------ERIDG-----LVSQIDCGSYHTLAYVHTTGQ 308
Query: 341 ILTWGWGGS 349
++++G G S
Sbjct: 309 VVSFGHGPS 317
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 123/282 (43%), Gaps = 56/282 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G HS + ++ +V ++WG N +G LG+G
Sbjct: 134 SCGHYHSLALSKDSQV------------------------------FSWGKNSHGQLGLG 163
Query: 304 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
SP+RV+ P+ QV+ G H+ A+S ++GWG +S G
Sbjct: 164 KEFPSQASPQRVRS-LEGIPLAQVAAGGTHSFALSLCGT-SFGWGS----------NSAG 211
Query: 363 QL---GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QL G P + +N+ + +SCG HT L +
Sbjct: 212 QLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQ 253
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 108/230 (46%), Gaps = 14/230 (6%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGL-GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L L G+ P + L + + G E + +T GKV ++G SG+LG+
Sbjct: 213 LALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGYSP 272
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G P+L++ ++G+ +I + A + G+V FG
Sbjct: 273 TPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 84/168 (50%), Gaps = 6/168 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GG H+ L+ G + G N G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHSFALSLCGTSFGWGSNSAG 211
Query: 102 QLGIS-ENI-GYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N+ S +PL I LK VV IS G H++ +T DG+++ +G N +GQLG
Sbjct: 212 QLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGYS 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
K P VE + G+ ++ + V G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 77/188 (40%), Gaps = 38/188 (20%)
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG---------- 286
G ++ AA+G HS + N RV GD + ++ + P I
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 287 ------------GELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 333
G ++ WG+ G LGIG ++ +P+++ + + QVSCG H+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT-LNGIKIIQVSCGHYHS 140
Query: 334 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 391
A+S + ++ +W G +S GQLG G + P V E + QV+
Sbjct: 141 LALSKDSQVFSW------------GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAA 188
Query: 392 GFNHTGAL 399
G H+ AL
Sbjct: 189 GGTHSFAL 196
>gi|15088545|gb|AAK84081.1|AF326781_2 putative chromosome condensation factor [Triticum monococcum]
Length = 907
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 156/373 (41%), Gaps = 72/373 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E P + + ++ +ACG HT +T TG +Y G ++
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++G+ + P RISG + ++ +S G H++ IT G+L+ +G S G LG G
Sbjct: 161 GLLGHGTDVGHWI-PRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALG-----------FEQSVAVTGGGKVLSWGAGGSG 207
K I P +VE LSG+ T A G QS A GK+ +WG G
Sbjct: 220 D--LKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKH 277
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + + L P + L A G + + +G+V+ G+
Sbjct: 278 RLGHGDKEARL---------KPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVY 328
Query: 268 DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
G+L S+ CL V+ + V Q++
Sbjct: 329 -------------------GQLGNLNSDGRPCL-------------VEDKIASEHVLQIA 356
Query: 328 CGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG H A + S ++ TWG G + G+LGHG+ D PT V +
Sbjct: 357 CGSYHVAVLTSRSEVFTWGKGAN------------GRLGHGDIEDRKVPTTVEALRDRAV 404
Query: 387 LQVSCGFNHTGAL 399
++CG N T A+
Sbjct: 405 RHIACGANFTAAI 417
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 126/301 (41%), Gaps = 70/301 (23%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H+S +T +GE++ WG++S G+LG G + V P VE
Sbjct: 69 KPLE-SNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG + + PR
Sbjct: 126 LAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTD---------VGHWIPRR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
I LEG+++ + G H+A I G+++ FGD +
Sbjct: 177 ISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSF----------------------- 213
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------------ 338
G LG G + + P V+ S V+CG HTAAI E
Sbjct: 214 -------GVLGHGDLKSISCPREVES-LSGLKTIAVACGVWHTAAIVEVIVTQSSATVSA 265
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
GK+ TWG G H +LGHG+ + PT V + +V+CG + T
Sbjct: 266 GKLFTWGDGDKH------------RLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVG 313
Query: 399 L 399
L
Sbjct: 314 L 314
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 116/276 (42%), Gaps = 69/276 (25%)
Query: 142 GELYMWGK---------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
G++Y+WG+ +S+ + K ++P P + + ++ G + V
Sbjct: 35 GDVYVWGEVVCDNSARTSSDTVIRSTGKTDFLLPKPLESNLVLDVY--HVDCGVRHASLV 92
Query: 193 TGGGKVLSWGAGGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
T G+V +WG GRLGHG +E S+ PRL++ L + A G H+
Sbjct: 93 TRNGEVFTWGEDSGGRLGHGTREDSV----------HPRLVESLAACNIDFVACGEFHTC 142
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWG--SNENGCLGIGSIDVLH 309
+ + GELYTWG ++ G LG G+ DV H
Sbjct: 143 AV------------------------------TTTGELYTWGDGTHNVGLLGHGT-DVGH 171
Query: 310 -SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
P R+ GP + VSCG HTA I S G++ T+G G S G LGHG
Sbjct: 172 WIPRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDG------------SFGVLGHG 219
Query: 368 NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
+ P V +K + V+CG HT A++E +
Sbjct: 220 DLKSISCPREVESLSGLKTIAVACGVWHTAAIVEVI 255
>gi|41052709|dbj|BAD07566.1| putative ZR1 protein [Oryza sativa Japonica Group]
gi|50251941|dbj|BAD27877.1| putative ZR1 protein [Oryza sativa Japonica Group]
Length = 978
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 176/363 (48%), Gaps = 60/363 (16%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
++++ACG H +T+ G V++ G+++ G+LG ++ S +P I L V+ I+ G
Sbjct: 207 VQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVS-DPKIIESLASTRVKAIAFG 265
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGL-GKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
H+ A+++ GELY WG+ ++ LGL G + + P K+ L GI + A G +
Sbjct: 266 AKHTCAVSISGELYEWGEGTHC-LGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHT 324
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
++ G++ ++G G G LGHG ++ P+ ++ L+GV+ K A G H
Sbjct: 325 AIISSAGQLFAYGDGTFGVLGHGDTLTVA---------RPKQVESLKGVRAKAIACGPWH 375
Query: 250 SACIDE----------NGRVYIFGD--------------------RAVDKMLFQEGNHAR 279
+A I E +G+++ +GD ++ F + + A+
Sbjct: 376 TAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAK 435
Query: 280 RPSLI--SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
+++ G ++T GS E+G LG + S ++GP V ++S G H A ++
Sbjct: 436 AQTIVLTITGVVFTIGSKEHGRLG-NPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLT 494
Query: 338 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
GK+ TWG G + GQLG G+ VD +PT+V E+ + ++CGFN T
Sbjct: 495 MNGKVFTWGKG------------TEGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFT 542
Query: 397 GAL 399
A+
Sbjct: 543 MAI 545
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 120/290 (41%), Gaps = 58/290 (20%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+ L K+ + S G H + T ++++WG+ L G + + +P + I
Sbjct: 148 ITQLPKQ--KSSEGLHVAYGATSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHII 205
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+ A G + + VT G+V SWG GRLGH S S P++I+ L
Sbjct: 206 DVQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKV---------SVSVSDPKIIESLAS 256
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNEN 297
+VK A G H+ + GELY WG +
Sbjct: 257 TRVKAIAFGAKHTCAVS------------------------------ISGELYEWGEGTH 286
Query: 298 GCLGIGSIDVLHS---PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTF 353
CLG+ S P ++ GP + +++CG HTA IS G++ +G GTF
Sbjct: 287 -CLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYG----DGTF 341
Query: 354 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
G LGHG+ + P V + V+A ++CG HT A++E +
Sbjct: 342 --------GVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERM 383
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ D G+LG + + P ++C A T+ LT TG V+ G + G+
Sbjct: 398 WGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGR 457
Query: 103 LG--ISENIGYSLEPLRISG-LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
LG +SE+ L I G LK E V +IS+G H + +T++G+++ WGK + GQLGLG
Sbjct: 458 LGNPLSEDTSICL----IEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLG 513
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ PT VE L A GF ++A+
Sbjct: 514 DYVDR--SYPTLVEALEDKQVHSIACGFNFTMAI 545
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 128/311 (41%), Gaps = 63/311 (20%)
Query: 43 WGNGDY--GRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG G + G G S+W P + + S+ +ACG HT ++ G ++A G
Sbjct: 281 WGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYGDGT 340
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAIT----------VDGELYMWG 148
FG LG + + + P ++ LK I+ G H++AI G+L+ WG
Sbjct: 341 FGVLGHGDTLTVA-RPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWG 399
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
G+LG K K+ +PT VE L+ Q + Q++ +T G V + G+ GR
Sbjct: 400 DADRGKLGHADKKMKL--VPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGR 457
Query: 209 LGH--GQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
LG+ +++SI LI+ L+ V+ ++G H A + NG+V
Sbjct: 458 LGNPLSEDTSIC------------LIEGPLKTEFVREISSGSSHIAVLTMNGKV------ 499
Query: 266 AVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 325
+TWG G LG+G P V+ + V
Sbjct: 500 ------------------------FTWGKGTEGQLGLGDYVDRSYPTLVEA-LEDKQVHS 534
Query: 326 VSCGWKHTAAI 336
++CG+ T AI
Sbjct: 535 IACGFNFTMAI 545
>gi|402902028|ref|XP_003913931.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 2
[Papio anubis]
Length = 355
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 139/301 (46%), Gaps = 49/301 (16%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + +
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGN---------Q 221
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
TP V++AA LHS C+++ + G +A +L
Sbjct: 222 LTP----------VRVAA---LHSVCVNQ----IVCG-------------YAHTLALTDE 251
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTW 344
G LY WG+N G LG G+ + L SP + E V+ +C HT+A G + W
Sbjct: 252 GLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMW 310
Query: 345 G 345
G
Sbjct: 311 G 311
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 115/226 (50%), Gaps = 16/226 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL- 274
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFGD 264
+P I + V+IAA H SA + G VY++G
Sbjct: 275 --------SPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 138/312 (44%), Gaps = 51/312 (16%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + +T D E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSASEALYVTDDDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
LSG K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 GLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V A G HS + +G V+ +G ++ G+ A +P+
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV S V+Q+
Sbjct: 180 IKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG ++ GQLG GN + + P + +
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHIMVEKERVV 287
Query: 387 LQVSCGFNHTGA 398
+C HT A
Sbjct: 288 EIAACHSAHTSA 299
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
>gi|390333856|ref|XP_788386.3| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Strongylocentrotus purpuratus]
Length = 782
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 153/335 (45%), Gaps = 66/335 (19%)
Query: 72 SLKALACGGAHTLF-----LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-V 125
S L C LF +TE G +Y G ND+GQLG+ + +P + GLK V
Sbjct: 26 SFPELNCSPFPFLFFFDVVITENGRLYVFGANDWGQLGLGHRKSVN-KPSSVKGLKHAGV 84
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
V+I+ G H+ A+T D L+ +G GQLG+G +K P +E L + G
Sbjct: 85 VKIACGRVHTIALTKDRHLHSFGAGGEGQLGVGD--SKQYEAPRMIEELEEQDYLLLSCG 142
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE-GVKVKIAA 244
+ S A+T G + WG G G+LGHG+++ + ++ +EL GV V++ +
Sbjct: 143 TDHSAALTASGTLYMWGGGSEGQLGHGEDTEV------------QIPRELSMGVPVRMVS 190
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGS 304
G+ H+A + E+ ++Y FG+ K+ E + G NE
Sbjct: 191 CGYYHTALLTEDKKLYTFGEGEGGKLGLGEA--------------HLGGVNE-------- 228
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 363
P+ V F PVD VSCG HTAAI+E G + T+G G S GQ
Sbjct: 229 ------PQHVS--FFTEPVDSVSCGNAHTAAITEKGHVYTFGNGAS------------GQ 268
Query: 364 LGHGND-VDYIHPTIVNFGENVKALQVSCGFNHTG 397
LGHG D ++ P V E + VSCG HT
Sbjct: 269 LGHGPDHLETNIPKRVARLEWTRCKWVSCGDCHTA 303
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 121/276 (43%), Gaps = 65/276 (23%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G D+G+LGLG +S +P + + +ACG HT+ LT+ +++ G G
Sbjct: 53 VFGANDWGQLGLGHRKSVNKPSSVKGLKHAGVVKIACGRVHTIALTKDRHLHSFGAGGEG 112
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ ++ Y P I L+ ++ + +S G HS+A+T G LYMWG S GQLG G+
Sbjct: 113 QLGVGDSKQYEA-PRMIEELEEQDYLLLSCGTDHSAALTASGTLYMWGGGSEGQLGHGED 171
Query: 161 AAKVIP------IPTK-VEC-------------------------------LSGIFTKQA 182
IP +P + V C L G+ Q
Sbjct: 172 TEVQIPRELSMGVPVRMVSCGYYHTALLTEDKKLYTFGEGEGGKLGLGEAHLGGVNEPQH 231
Query: 183 ALGFEQSV-----------AVTGGGKVLSWGAGGSGRLGHGQ---ESSILGFLRSTSEYT 228
F + V A+T G V ++G G SG+LGHG E++I
Sbjct: 232 VSFFTEPVDSVSCGNAHTAAITEKGHVYTFGNGASGQLGHGPDHLETNI----------- 280
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
P+ + LE + K + G H+A + G +Y FGD
Sbjct: 281 PKRVARLEWTRCKWVSCGDCHTAIVTAKGCLYTFGD 316
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 72/178 (40%), Gaps = 38/178 (21%)
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG-------------------- 286
F I ENGR+Y+FG ++ +PS + G
Sbjct: 39 FFFDVVITENGRLYVFGANDWGQLGLGHRKSVNKPSSVKGLKHAGVVKIACGRVHTIALT 98
Query: 287 --GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILT 343
L+++G+ G LG+G +P ++ E +SCG H+AA++ G +
Sbjct: 99 KDRHLHSFGAGGEGQLGVGDSKQYEAPRMIEE-LEEQDYLLLSCGTDHSAALTASGTLYM 157
Query: 344 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
WG G S GQLGHG D + P ++ G V VSCG+ HT L E
Sbjct: 158 WGGG------------SEGQLGHGEDTEVQIPRELSMG--VPVRMVSCGYYHTALLTE 201
>gi|403303292|ref|XP_003942270.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Saimiri boliviensis boliviensis]
Length = 551
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G I + P R++G K VV I+ G A+ GE+Y+WG N NGQLGLG
Sbjct: 183 QVGSGSTINQPI-PRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGN 241
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 242 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 293
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y + E + + ++IAA H SA + G VY++G
Sbjct: 294 --KSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 114/226 (50%), Gaps = 16/226 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
+ G G LGLG ++S P + + L+ G G H + T G V+ G N +
Sbjct: 69 VLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAY 128
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG + + L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G
Sbjct: 129 SQLG-NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSG 187
Query: 159 KKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ PIP +V CL A G +AV G+V WG G+G+LG G
Sbjct: 188 STINQ--PIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLG----- 240
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S ++ TP + L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 241 ----NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 153/367 (41%), Gaps = 67/367 (18%)
Query: 46 GDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYA 94
GD G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 10 GDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFV 69
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSN 152
G N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+
Sbjct: 70 LGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAY 128
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
QLG G ++P LS + A G S+ +T G+V +WG SG++G G
Sbjct: 129 SQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSG 187
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
+ ++ PR + + C+ V I A +M
Sbjct: 188 S---------TINQPIPRRV-----------------TGCLQNKVVVTI----ACGQMCC 217
Query: 273 QEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 332
+++ GE+Y WG N NG LG+G+ +P RV V +V+CG+ H
Sbjct: 218 M--------AVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRV-AALQGIRVQRVACGYAH 268
Query: 333 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 391
T ++ EG++ WG +S GQLG GN + +PT V ++ +C
Sbjct: 269 TLVLTDEGQVYAWG------------ANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAAC 316
Query: 392 GFNHTGA 398
HT A
Sbjct: 317 HSTHTSA 323
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 110/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ LSG K A L + V T
Sbjct: 62 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIACLSYGSGPHIVLATTE 117
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSL---- 165
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 166 --------------------------VLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRVT 199
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG A+ + G++ WG+ G+ GQLG GN +
Sbjct: 200 GCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGN------------GQLGLGNSGNQPT 247
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTD 274
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
>gi|297792001|ref|XP_002863885.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297309720|gb|EFH40144.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 454
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 191/443 (43%), Gaps = 87/443 (19%)
Query: 25 GICKRWISSTL-QRRFAALWGNGDYGRLGLGSLE------SRWRPVVCSAFEKHSLKALA 77
G+ +R +ST +RR +G+G++G LGL S + P V S + ++
Sbjct: 30 GLVRRQFTSTRGERRTVMSFGDGNHGALGLSSSSIPGMGMDAYEPTVVSNLPS-DISFIS 88
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLEPLRISGLKKEVVQISTGYHH 134
G H+L +T G ++A G ND GQLG + EP R+ GL V + +
Sbjct: 89 AGHYHSLAVTFGGEIWAWGRNDEGQLGRIAVDSGRDSRSEPKRVEGLDN--VNVRAAFAS 146
Query: 135 ---SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
S+AI DG L++WG++ GQLGLGK + +P++VE L+ + +LG+ ++A
Sbjct: 147 GVVSAAIGDDGSLWVWGRSKRGQLGLGKGIIEA-RVPSRVETLAAEHVVKVSLGWGHALA 205
Query: 192 VTGGGKVLSWGAGGSGRLGH---GQESSILGFLRSTS----------------------- 225
+T GKV WG GR+G+ E+S+L + S
Sbjct: 206 LTVDGKVFGWGYVADGRVGNVGLPLEASLLDSITDGSMKDQHAADLNLEAAEKKVVEAMS 265
Query: 226 -------EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY-----IFGD--RAVDKML 271
+ P L++E VKV A G HS + +G + I+G R+ +
Sbjct: 266 KENDMPIAWEPCLVEETRNVKVADIACGSDHSLILCHDGTLLSSGSNIYGQLGRSKQDLG 325
Query: 272 FQEGNHARRPSLISGG-------------ELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
+ P I+ G ++ +WG N + LG G + H P V+G
Sbjct: 326 MTPVDITESPISIAAGLGHSLAICNRDERKILSWGWNRSRQLGRGKPE--HLPREVEGFD 383
Query: 319 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 377
ESP VS G H+ ++E G+ WG G G+LG G+ D P +
Sbjct: 384 GESPA-SVSAGRVHSLCVTEKGEAWVWGCG------------KNGRLGLGSSSDEPEPML 430
Query: 378 VNFGENVKALQVSCGFNHTGALL 400
+ E LQ GF+H+ L+
Sbjct: 431 LEDIEGC-VLQTVAGFDHSLILV 452
>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
Length = 5345
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 153/293 (52%), Gaps = 34/293 (11%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRW- 60
+ R +T++++Y +K K+ G +T + F+ WG GD G+LG SRW
Sbjct: 3540 VPRQITSLSQYVIK---KVAVHSGGRHSLALTTDGKVFS--WGEGDDGKLGHF---SRWN 3591
Query: 61 --RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI 118
+P + A + ++ +ACG +H+ +T G +Y GL ++G+LG +N L+P ++
Sbjct: 3592 CDKPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEYGRLGHGDNTT-QLKPKQV 3650
Query: 119 SGLKKE-VVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
L E VVQ++ G + A+T +G++Y WG G+LG G ++ +P +V+ L
Sbjct: 3651 KALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRG--GSEGCNVPHEVDRLR 3708
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
Q G + S+A+T G+V +WG G RLGHG ++ + P++++ L
Sbjct: 3709 DQKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHV---------RKPQIVEGL 3759
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLI 284
+G K+ A G LH + ++G+V+ +GD Q+GN R+P+L+
Sbjct: 3760 KGKKIVHVAVGALHCLAVTDSGQVFAWGDNDHG----QQGNGTTTVNRKPALV 3808
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 150/337 (44%), Gaps = 50/337 (14%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + L L + VQI G +T +G++Y G+ +
Sbjct: 3466 VFCWGLNDKDQLGGPKGSKIKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVYACGEAT 3525
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG V +P ++ LS K+ A+ G S+A+T GKV SWG G G+L
Sbjct: 3526 NGRLGLGITTGTV-SVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGDDGKL 3584
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF------- 262
GH F R + PRLI+ L+ +V+ A G HSA I NG +Y +
Sbjct: 3585 GH--------FSRWNCD-KPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEYGR 3635
Query: 263 ---GDRAVD------KMLFQE--------GNHARRPSLISGGELYTWGSNENGCLGIGSI 305
GD K L E A+ +L G++Y+WG + G LG G
Sbjct: 3636 LGHGDNTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRGGS 3695
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 364
+ + P V + V Q+ CG + + A+++ G++ TWG G +L
Sbjct: 3696 EGCNVPHEVDR-LRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYF------------RL 3742
Query: 365 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GHG D P IV + K + V+ G H A+ +
Sbjct: 3743 GHGTDAHVRKPQIVEGLKGKKIVHVAVGALHCLAVTD 3779
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 132/306 (43%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4572 WGEGEDGKLGHGNRSPCDRPRVIDSLRGKEVVDIAAGGAHSACITANGELYTWGKGRYGR 4631
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ P + LK VV ++ +G + IT D ++ WG G+LG G
Sbjct: 4632 LGHGDSEDQP-RPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4689
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L G + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4690 -GSDGCKVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGHGSDDHV-- 4746
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR + L+ KV A G LH + G V
Sbjct: 4747 -------RRPRKVSALQNKKVIDVACGSLHCVACTDTGEV-------------------- 4779
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
++WG N+ G LG G+ + + P V + +++V+CG H+ A S
Sbjct: 4780 ----------FSWGDNDEGQLGDGTTNAIQRPRLVASLLGKK-INRVACGSAHSLAWSTN 4828
Query: 340 KILTWG 345
K ++ G
Sbjct: 4829 KAVSAG 4834
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 171/384 (44%), Gaps = 53/384 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG +PV C A L GG TLF +T G V+ATG G
Sbjct: 4466 WGHNHRGQLGGVDGAKVKQPVSCEALAVTRPIQLV-GGEQTLFAVTAEGKVFATGYGAGG 4524
Query: 102 QLGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG+ +E++ + + I + + + +++G H A++ +GE+Y WG+ +G+LG G
Sbjct: 4525 RLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHGN 4584
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P ++ L G A G S +T G++ +WG G GRLGHG
Sbjct: 4585 RSP--CDRPRVIDSLRGKEVVDIAAGGAHSACITANGELYTWGKGRYGRLGHGD------ 4636
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S + P+L++ L+ +V A +G + CI ++ V+ +GD K+ +
Sbjct: 4637 ---SEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4693
Query: 278 ARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
+ P +L G +YTWG + LG GS D + P +V
Sbjct: 4694 CKVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGHGSDDHVRRPRKVS 4753
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
++ +D V+CG H A ++ G++ +W G + GQLG G
Sbjct: 4754 ALQNKKVID-VACGSLHCVACTDTGEVFSW------------GDNDEGQLGDGTTNAIQR 4800
Query: 375 PTIVNFGENVKALQVSCGFNHTGA 398
P +V K +V+CG H+ A
Sbjct: 4801 PRLVASLLGKKINRVACGSAHSLA 4824
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 127/299 (42%), Gaps = 44/299 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNGD G+LG G ++ P + + + + CG ++++ LT G VY+ G +FG+
Sbjct: 643 WGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALTSNGEVYSWGKGNFGR 702
Query: 103 L--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
L G SE+ + G + V +G + A+T G +Y WG G+LG G
Sbjct: 703 LGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVYSWGDGDYGKLGRGGN 762
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P +E L G + G + S+A+T G V +WG G + RLGHG E
Sbjct: 763 DG--CKTPKVIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGDNYRLGHGTEDHA--- 817
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P+ I+ L KVK A G LH I E+
Sbjct: 818 ------RHPKQIEALSSKKVKDIAIGSLHCMAITED------------------------ 847
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
GELY WG NE G LG SI P + G ++ + V+CG T A + G
Sbjct: 848 ------GELYGWGRNEQGQLGNPSISNFTEPTLIGGMEGKNIIG-VACGPTQTFAWTSG 899
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 158/353 (44%), Gaps = 61/353 (17%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
++ +AC L L++ G VY + ++ +L+ L G +EV++I++
Sbjct: 577 VQQIACSERCCLILSKAGKVY---------MLYYTSLSPTLQQLNGFG-DREVIRIASHP 626
Query: 133 H--HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
H +T DGE++ WG G+LG G P + LSG + G SV
Sbjct: 627 DGKHYMGLTSDGEVFSWGNGDGGKLGHGDYQNH--EEPALITGLSGKQVAKICCGSSYSV 684
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFL 248
A+T G+V SWG G GRLGHG S + TP L+K +G ++ A +G
Sbjct: 685 ALTSNGEVYSWGKGNFGRLGHGS---------SEDQTTPMLLKFFKGHRIVDVACGSGDA 735
Query: 249 HSACIDENGRVYIFGD-----------------RAVDKMLFQE------GNHARRPSLIS 285
+ + ++G VY +GD + ++K++ Q+ GN +L
Sbjct: 736 QTLAVTDSGAVYSWGDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSM-ALTK 794
Query: 286 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 345
G +YTWG +N LG G+ D P++++ S V ++ G H AI+E L +G
Sbjct: 795 SGAVYTWGKGDNYRLGHGTEDHARHPKQIEA-LSSKKVKDIAIGSLHCMAITEDGEL-YG 852
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
W G + GQLG+ + ++ PT++ E + V+CG T A
Sbjct: 853 W----------GRNEQGQLGNPSISNFTEPTLIGGMEGKNIIGVACGPTQTFA 895
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 149/338 (44%), Gaps = 53/338 (15%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMW 147
+G ++ G N GQLG + +P+ L +Q+ G A+T +G+++
Sbjct: 4460 SGQIWGWGHNHRGQLGGVDGAKVK-QPVSCEALAVTRPIQLVGGEQTLFAVTAEGKVFAT 4518
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGG 205
G + G+LG + + PT++E + +F K+ A+ G + +A++ G+V SWG G
Sbjct: 4519 GYGAGGRLG--VGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGE 4576
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LGHG S PR+I L G +V AAG HSACI NG +Y +G
Sbjct: 4577 DGKLGHGNRSPC---------DRPRVIDSLRGKEVVDIAAGGAHSACITANGELYTWGKG 4627
Query: 266 AVDKMLFQEGNHARRPSLISG------------------------GELYTWGSNENGCLG 301
++ + RP L+ +++WG + G LG
Sbjct: 4628 RYGRLGHGDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLG 4687
Query: 302 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSS 360
G D P +++ V +V CG + + A+++ G + TWG G H
Sbjct: 4688 RGGSDGCKVPMKIET-LQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYH---------- 4736
Query: 361 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+LGHG+D P V+ +N K + V+CG H A
Sbjct: 4737 --RLGHGSDDHVRRPRKVSALQNKKVIDVACGSLHCVA 4772
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 122/285 (42%), Gaps = 46/285 (16%)
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
+ ++ WG N QLG G K +K I +PT + LS + Q G + VT GKV
Sbjct: 3462 IQTNVFCWGLNDKDQLG-GPKGSK-IKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVY 3519
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
+ G +GRLG G + + R + + +IK KV + + G HS + +G+V
Sbjct: 3520 ACGEATNGRLGLGITTGTVSVPRQITSLSQYVIK-----KVAVHSGG-RHSLALTTDGKV 3573
Query: 260 YIFGDRA-----------VDKMLFQEGNHARR-----------PSLISGGELYTWGSNEN 297
+ +G+ DK E ++R ++ S G+LYTWG E
Sbjct: 3574 FSWGEGDDGKLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEY 3633
Query: 298 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGGSHGTFS 354
G LG G P++V+ + V QV+CG + A EGK+ +WG G F
Sbjct: 3634 GRLGHGDNTTQLKPKQVKA-LAHERVVQVACGSRDAQTLALTDEGKVYSWG----DGDF- 3687
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G+LG G P V+ + K Q+ CG + AL
Sbjct: 3688 -------GKLGRGGSEGCNVPHEVDRLRDQKVCQIECGAQFSLAL 3725
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 91/223 (40%), Gaps = 45/223 (20%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV--------KIAAA 245
G G++ WG G+LG + + + + R I+ + G + K+ A
Sbjct: 4459 GSGQIWGWGHNHRGQLGGVDGAKVKQPVSCEALAVTRPIQLVGGEQTLFAVTAEGKVFAT 4518
Query: 246 GFL--------------HSACIDENGRVYIFGDRAVDKMLFQE-GNHARRPSLISGGELY 290
G+ H ++ V+I K+ G H +L + GE+Y
Sbjct: 4519 GYGAGGRLGVGGTESVSHPTQLESIQHVFI------KKLAVNSGGKHCL--ALSAEGEVY 4570
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGS 349
+WG E+G LG G+ P + + VD ++ G H+A I+ G++ TWG G
Sbjct: 4571 SWGEGEDGKLGHGNRSPCDRPRVIDSLRGKEVVD-IAAGGAHSACITANGELYTWGKG-- 4627
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
G+LGHG+ D P +V ++ + + ++CG
Sbjct: 4628 ----------RYGRLGHGDSEDQPRPKLVEALKSYRVVDMACG 4660
>gi|148228601|ref|NP_001089142.1| retinitis pigmentosa GTPase regulator [Xenopus laevis]
gi|77808101|gb|ABB03732.1| RPGR [Xenopus laevis]
Length = 727
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 150/334 (44%), Gaps = 69/334 (20%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
++CG HT+ +T G +Y G N++GQLG+ S +P + LK E VV S G +H
Sbjct: 42 ISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAIS-KPTCVKALKSEKVVFASCGRNH 100
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT----KQAALGFEQSV 190
+ T G+LY G NS GQLGLG + + T + +S T KQ + G S
Sbjct: 101 TLLYTEQGKLYSSGGNSEGQLGLGDTSGR-----TSFQEISFFNTQYKIKQLSAGSNTSA 155
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T GK+ WG G+LG +E+ TP+ I G + + G+ HS
Sbjct: 156 ALTVDGKLFMWGDNSEGQLGLEKEAIY---------STPQKID--IGKPISWISCGYYHS 204
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGS--IDVL 308
A + ++G ELYT+G ENG LG+ S +
Sbjct: 205 AFVTQDG------------------------------ELYTFGEPENGKLGLPSDKLKKH 234
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
P+RV G + V VSCG +HT A++E ++ T+G G GQLGHG
Sbjct: 235 KKPQRVSGLSGK--VKIVSCGGEHTIAVTEKEVYTFGLG------------QFGQLGHGT 280
Query: 369 DVDYIH-PTIVNFGENVKALQVSCGFNHTGALLE 401
+ P V+ L V+CG NHT + +
Sbjct: 281 FIFETQLPKAVDVLTKKTILYVTCGENHTAVITD 314
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 146/311 (46%), Gaps = 44/311 (14%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGL + + +P A + + +CG HTL TE G +Y++G N G
Sbjct: 60 VFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEG 119
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + G S + + + ++ Q+S G + S+A+TVDG+L+MWG NS GQLGL K+
Sbjct: 120 QLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKE 179
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P K++ G + G+ S VT G++ ++G +G+LG L
Sbjct: 180 A--IYSTPQKIDI--GKPISWISCGYYHSAFVTQDGELYTFGEPENGKLG-------LPS 228
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ P+ + L G KVKI + G H+ + E
Sbjct: 229 DKLKKHKKPQRVSGLSG-KVKIVSCGGEHTIAVTEK------------------------ 263
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
E+YT+G + G LG G+ + ++ + V+CG HTA I++
Sbjct: 264 -------EVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDKG 316
Query: 341 ILTWGWGGSHG 351
+L G HG
Sbjct: 317 LLYTFGDGRHG 327
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 43/69 (62%), Gaps = 9/69 (13%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G+G +G+LGLG + +++ P++CS F K +++++ACGG H L V+AT
Sbjct: 321 FGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCHML-------VFATPRPKE 373
Query: 101 GQLGISENI 109
++ I++ +
Sbjct: 374 SEMMINDEL 382
>gi|58533120|gb|AAW78916.1| putative chromosome condensation factor [Triticum aestivum]
Length = 907
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 156/373 (41%), Gaps = 72/373 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E P + + ++ +ACG HT +T TG +Y G ++
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++G+ + P RISG + ++ +S G H++ IT G+L+ +G S G LG G
Sbjct: 161 GLLGHGTDVGHWI-PRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALG-----------FEQSVAVTGGGKVLSWGAGGSG 207
K I P +VE LSG+ T A G QS A GK+ +WG G
Sbjct: 220 D--LKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKH 277
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + + L P + L A G + + +G+V+ G+
Sbjct: 278 RLGHGDKEARL---------KPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVY 328
Query: 268 DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
G+L S+ CL V+ + V Q++
Sbjct: 329 -------------------GQLGNLNSDGRPCL-------------VEDKIASEHVLQIA 356
Query: 328 CGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG H A + S ++ TWG G + G+LGHG+ D PT V +
Sbjct: 357 CGSYHVAVLTSRSEVFTWGKGAN------------GRLGHGDIEDRKVPTTVEALRDRAV 404
Query: 387 LQVSCGFNHTGAL 399
++CG N T A+
Sbjct: 405 RHIACGANFTAAI 417
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 126/301 (41%), Gaps = 70/301 (23%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H+S +T +GE++ WG++S G+LG G + V P VE
Sbjct: 69 KPLE-SNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG + + PR
Sbjct: 126 LAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTD---------VGHWIPRR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
I LEG+++ + G H+A I G+++ FGD +
Sbjct: 177 ISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSF----------------------- 213
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------------ 338
G LG G + + P V+ S V+CG HTAAI E
Sbjct: 214 -------GVLGHGDLKSISCPREVES-LSGLKTIAVACGVWHTAAIVEVIVTQSSATVSA 265
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
GK+ TWG G H +LGHG+ + PT V + +V+CG + T
Sbjct: 266 GKLFTWGDGDKH------------RLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVG 313
Query: 399 L 399
L
Sbjct: 314 L 314
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 116/276 (42%), Gaps = 69/276 (25%)
Query: 142 GELYMWGK---------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
G++Y+WG+ +S+ + K ++P P + + ++ G + V
Sbjct: 35 GDVYVWGEVVCDNSARTSSDTVIRSTGKTDFLLPKPLESNLVLDVY--HVDCGVRHASLV 92
Query: 193 TGGGKVLSWGAGGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
T G+V +WG GRLGHG +E S+ PRL++ L + A G H+
Sbjct: 93 TRNGEVFTWGEDSGGRLGHGTREDSV----------HPRLVESLAACNIDFVACGEFHTC 142
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWG--SNENGCLGIGSIDVLH 309
+ + GELYTWG ++ G LG G+ DV H
Sbjct: 143 AV------------------------------TTTGELYTWGDGTHNVGLLGHGT-DVGH 171
Query: 310 -SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
P R+ GP + VSCG HTA I S G++ T+G G S G LGHG
Sbjct: 172 WIPRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDG------------SFGVLGHG 219
Query: 368 NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
+ P V +K + V+CG HT A++E +
Sbjct: 220 DLKSISCPREVESLSGLKTIAVACGVWHTAAIVEVI 255
>gi|281349737|gb|EFB25321.1| hypothetical protein PANDA_007753 [Ailuropoda melanoleuca]
Length = 527
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 99 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++G K V I+ G S A+ GE+Y+WG N NGQLGLG
Sbjct: 159 QVGSGSTANQPI-PRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P ++ L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 218 SGNQ--PTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 269
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y +I E + + ++IAA H SA + G VY++G
Sbjct: 270 --KSNQSYPAPVIVEKDRI-IEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 113/219 (51%), Gaps = 16/219 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V +++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 111 TTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 168
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 169 PIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SG 219
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++ TP I L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 220 NQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 146/347 (42%), Gaps = 60/347 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 64
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 65 PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 125 -LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 174
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW 292
+ C+ V I A +M ++++ GE+Y W
Sbjct: 175 -----------------TGCLQNKVAVNI----ACGQMCSM--------AVVNTGEVYVW 205
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 351
G N NG LG+GS +P R+ V +V+CG+ HT ++ EG++ WG
Sbjct: 206 GYNGNGQLGLGSSGNQPTPCRI-AALQGIRVQRVACGYAHTLVLTDEGQVYAWG------ 258
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +P V ++ +C HT A
Sbjct: 259 ------ANSYGQLGTGNKSNQSYPAPVIVEKDRIIEIAACHSAHTSA 299
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 264 QLGTGNKSNQSY-PAPVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 317 --SVVLPHLTHFSCTDDVF 333
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 110/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ LSG K A L + V T
Sbjct: 38 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIACLSYGSGPHIVLATTE 93
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 94 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEV--------ACGSYHSL---- 141
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 142 --------------------------VLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 175
Query: 316 GPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G ++CG + A ++ G++ WG+ G+ GQLG G+ +
Sbjct: 176 GCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGN------------GQLGLGSSGNQPT 223
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P + + ++ +V+CG+ HT L +
Sbjct: 224 PCRIAALQGIRVQRVACGYAHTLVLTD 250
>gi|222632434|gb|EEE64566.1| hypothetical protein OsJ_19418 [Oryza sativa Japonica Group]
Length = 1002
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 168/394 (42%), Gaps = 70/394 (17%)
Query: 21 GSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG 80
G ++ R I T ++ WG GRLG G+ RP + + +++ +ACG
Sbjct: 227 GEQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGE 286
Query: 81 AHTLFLTETGCVYATGLNDF--GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSS 136
HT +T +G +Y G + G LG + + L P R+SG + +V+ ++ G HS+
Sbjct: 287 FHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWL-PKRVSGPLEGLQVLSVACGSWHSA 345
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG-- 194
G+L+ +G + G LG G + + + P +VE LSG + A G S A+
Sbjct: 346 LTMSSGKLFTFGDGTFGSLGHGDRES--VAYPKEVEALSGFRAMKVACGVWHSAAIVEIS 403
Query: 195 --------GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
K+ +WG G RLGHG + + L P ++ L
Sbjct: 404 GQASTNAMSRKLFTWGDGDKNRLGHGDKEAKL---------VPTCVQAL----------- 443
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSID 306
+D N G H+ +L + G ++T GS+ NG LG D
Sbjct: 444 ------VDHNFHQVACG-------------HSMTVALATSGHVFTMGSSNNGQLGNPKAD 484
Query: 307 VLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLG 365
P VQ V+++SCG H AA+ S ++ TWG G + G+LG
Sbjct: 485 G-KQPCMVQDKLGNELVEEISCGSNHVAALTSRSEVYTWGMGAN------------GRLG 531
Query: 366 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
HG+ D PT+V+ ++ +SCG N T +
Sbjct: 532 HGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCI 565
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 52/234 (22%)
Query: 171 VECLSGIFT--KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
+E L ++ +Q A G T G+V +WG GRLGHG ++ I
Sbjct: 217 IESLGDVYVWGEQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDIC---------R 267
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGE 288
P+L++ L V+ A G H+ + +G +Y +GD
Sbjct: 268 PKLVESLAVSNVEYIACGEFHTCVVTASGDLYDWGD------------------------ 303
Query: 289 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG-WKHTAAISEGKILTWGWG 347
GS G LG G+ P+RV GP V V+CG W +S GK+ T+G
Sbjct: 304 ----GSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWHSALTMSSGKLFTFG-- 357
Query: 348 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GTF G LGHG+ +P V +A++V+CG H+ A++E
Sbjct: 358 --DGTF--------GSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVE 401
>gi|392355475|ref|XP_003752052.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
norvegicus]
Length = 608
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 173/395 (43%), Gaps = 71/395 (17%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K D+ + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDVPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE--------NIGYSLEPLRISGL 121
+K ACG HTL T+TG VYA G N+ GQLG+ + IG+ P I
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGF-FTPSDI--- 179
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+ Q+S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G
Sbjct: 180 ---IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIP----HEVTVGKPISW 232
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
+ G+ S VT G++ ++G +G+LG + I + +P+ + + ++
Sbjct: 233 ISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLI-------NHRSPQRVLGIPDKVIQ 285
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLG 301
+A G G + ++ V Y +G + G LG
Sbjct: 286 VACGG----------GHTVVLTEKVV----------------------YAFGLGQFGQLG 313
Query: 302 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSS 360
+G+ S ++ + + +SCG HTA +++ G + T+G G HG
Sbjct: 314 LGTFLFETSEPKIIDRIKDQKISHISCGENHTALMTDIGLMYTFG-DGRHGKLG------ 366
Query: 361 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
LG N + PT+ + ++CG H
Sbjct: 367 ---LGMENFTNQFFPTLCSNFLKFTVQLIACGGCH 398
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 170/379 (44%), Gaps = 61/379 (16%)
Query: 50 RLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTL--FLTETGCVYATGLNDFGQLGI 105
R G G L RP V + F K + A G + +TG V+ FG+
Sbjct: 6 RWGTGGLGQYLRPNRVAPAVFPKQAQIPFAAFGMAEPESLVPDTGAVFT-----FGKTKF 60
Query: 106 SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ENI P + + +S G H++ +T + +LYM+G N+ GQLGLG K+A I
Sbjct: 61 AENI-----PSKFWFKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSA--I 113
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
PT ++ L K AA G ++ T G V + G G+LG G F
Sbjct: 114 SKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTF-HQIG 172
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--- 282
+TP I +K +AG SA + E+G+++++GD + ++ + ++ P
Sbjct: 173 FFTPSDI-------IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVT 225
Query: 283 -----------------LISGGELYTWGSNENGCLGIGSIDVLH--SPERVQGPFSESPV 323
+ + GELYT+G ENG LG+ + +++ SP+RV G V
Sbjct: 226 VGKPISWISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINHRSPQRVLG--IPDKV 283
Query: 324 DQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGE 382
QV+CG HT ++E + +G G GQLG G + + P I++ +
Sbjct: 284 IQVACGGGHTVVLTEKVVYAFGLG------------QFGQLGLGTFLFETSEPKIIDRIK 331
Query: 383 NVKALQVSCGFNHTGALLE 401
+ K +SCG NHT + +
Sbjct: 332 DQKISHISCGENHTALMTD 350
>gi|403303294|ref|XP_003942271.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Saimiri boliviensis boliviensis]
Length = 556
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 187
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G I + P R++G K VV I+ G A+ GE+Y+WG N NGQLGLG
Sbjct: 188 QVGSGSTINQPI-PRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGN 246
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 247 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 298
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y + E + + ++IAA H SA + G VY++G
Sbjct: 299 --KSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 340
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 114/226 (50%), Gaps = 16/226 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
+ G G LGLG ++S P + + L+ G G H + T G V+ G N +
Sbjct: 74 VLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAY 133
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG + + L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G
Sbjct: 134 SQLG-NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSG 192
Query: 159 KKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ PIP +V CL A G +AV G+V WG G+G+LG G
Sbjct: 193 STINQ--PIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLG----- 245
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S ++ TP + L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 246 ----NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 146/347 (42%), Gaps = 60/347 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 35 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 93
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 94 PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 153
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 154 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TINQPIPRRV 203
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW 292
+ C+ V I A +M +++ GE+Y W
Sbjct: 204 -----------------TGCLQNKVVVTI----ACGQMCCM--------AVVDSGEVYVW 234
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 351
G N NG LG+G+ +P RV V +V+CG+ HT ++ EG++ WG
Sbjct: 235 GYNGNGQLGLGNSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWG------ 287
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 288 ------ANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 110/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ LSG K A L + V T
Sbjct: 67 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIACLSYGSGPHIVLATTE 122
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 123 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSL---- 170
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 171 --------------------------VLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRVT 204
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG A+ + G++ WG+ G+ GQLG GN +
Sbjct: 205 GCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGN------------GQLGLGNSGNQPT 252
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 253 PCRVAALQGIRVQRVACGYAHTLVLTD 279
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 233 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 292
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 293 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 345
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 346 --SVILPHLTHFSCTDDVF 362
>gi|213626735|gb|AAI69997.1| RPGR [Xenopus laevis]
Length = 727
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 150/334 (44%), Gaps = 69/334 (20%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
++CG HT+ +T G +Y G N++GQLG+ S +P + LK E VV S G +H
Sbjct: 42 ISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAIS-KPTCVKALKSEKVVFASCGRNH 100
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT----KQAALGFEQSV 190
+ T G+LY G NS GQLGLG + + T + +S T KQ + G S
Sbjct: 101 TLLYTEQGKLYSSGGNSEGQLGLGDTSGR-----TSFQEISFFNTQYKIKQLSAGSNTSA 155
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T GK+ WG G+LG +E+ TP+ I G + + G+ HS
Sbjct: 156 ALTVDGKLFMWGDNSEGQLGLEKEAIY---------STPQKID--IGKPISWISCGYYHS 204
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGS--IDVL 308
A + ++G ELYT+G ENG LG+ S +
Sbjct: 205 AFVTQDG------------------------------ELYTFGEPENGKLGLPSDKLKKH 234
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
P+RV G + V VSCG +HT A++E ++ T+G G GQLGHG
Sbjct: 235 KKPQRVSGLSGK--VKIVSCGGEHTIAVTEKEVYTFGLG------------QFGQLGHGT 280
Query: 369 DVDYIH-PTIVNFGENVKALQVSCGFNHTGALLE 401
+ P V+ L V+CG NHT + +
Sbjct: 281 FIFETQLPKAVDVLTKKTILYVTCGENHTAVITD 314
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 146/311 (46%), Gaps = 44/311 (14%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGL + + +P A + + +CG HTL TE G +Y++G N G
Sbjct: 60 VFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEG 119
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + G S + + + ++ Q+S G + S+A+TVDG+L+MWG NS GQLGL K+
Sbjct: 120 QLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKE 179
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P K++ G + G+ S VT G++ ++G +G+LG L
Sbjct: 180 A--IYSTPQKIDI--GKPISWISCGYYHSAFVTQDGELYTFGEPENGKLG-------LPS 228
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ P+ + L G KVKI + G H+ + E
Sbjct: 229 DKLKKHKKPQRVSGLSG-KVKIVSCGGEHTIAVTEK------------------------ 263
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
E+YT+G + G LG G+ + ++ + V+CG HTA I++
Sbjct: 264 -------EVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDKG 316
Query: 341 ILTWGWGGSHG 351
+L G HG
Sbjct: 317 LLYTFGDGRHG 327
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 43/69 (62%), Gaps = 9/69 (13%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G+G +G+LGLG + +++ P++CS F K +++++ACGG H L V+AT
Sbjct: 321 FGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCHML-------VFATPRPKE 373
Query: 101 GQLGISENI 109
++ I++ +
Sbjct: 374 SEMMINDEL 382
>gi|332841362|ref|XP_003314204.1| PREDICTED: RCC1 and BTB domain-containing protein 2, partial [Pan
troglodytes]
Length = 552
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 126 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 185
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + + P R++G K VV I+ G A+ GE+Y+WG N NGQLGLG
Sbjct: 186 QVGSGSTVNQPI-PRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN 244
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 245 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 296
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y + E + + ++IAA H SA + G VY++G
Sbjct: 297 --KSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 338
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 112/219 (51%), Gaps = 16/219 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 79 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 137
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 138 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 195
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 196 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN---------SG 246
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++ TP + L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 247 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 285
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 146/347 (42%), Gaps = 60/347 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 33 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 91
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 92 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 151
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 152 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPIPRRV 201
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW 292
+ C+ V I A +M +++ GE+Y W
Sbjct: 202 -----------------TGCLQNKVVVTI----ACGQMCCM--------AVVDTGEVYVW 232
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 351
G N NG LG+G+ +P RV V +V+CG+ HT ++ EG++ WG
Sbjct: 233 GYNGNGQLGLGNSGNQPTPCRVAA-LQGIRVQRVACGYAHTLVLTDEGQVYAWG------ 285
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 286 ------ANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA 326
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 231 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 290
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 291 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 343
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 344 --SVILPHLTHFSCTDDVF 360
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 110/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ L+G K A L + V T
Sbjct: 65 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLNG--KKIACLSYGSGPHIVLATTE 120
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 121 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLV--- 169
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 170 ---------------------------LTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 202
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG A+ + G++ WG+ G+ GQLG GN +
Sbjct: 203 GCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLGLGNSGNQPT 250
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 251 PCRVAALQGIRVQRVACGYAHTLVLTD 277
>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
Length = 5197
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 133/299 (44%), Gaps = 48/299 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ +S RP + A + +ACG AH+ +T G V G +G+
Sbjct: 4488 WGEGEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGR 4547
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4548 LGHGDSED-QLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4605
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4606 -GSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHV-- 4662
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P+ + L+G K+ A G LH AC D
Sbjct: 4663 -------RRPKKVAALQGKKIISIATGSLHCVACSD------------------------ 4691
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
GGE++TWG N+ G LG G++ + P VQ + +V CG HT A+S
Sbjct: 4692 -------GGEVFTWGDNDEGQLGDGTVSAIQRPRLVQS-LQGKHIVKVICGSAHTLALS 4742
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3352 WGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3411
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSA--ITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L VVQ++ G + +T +G ++ WG G+LG G
Sbjct: 3412 LGHGDNC-TQLKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRG- 3469
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +VE L+G+ Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3470 -GSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHV-- 3526
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P I+ L G KV A G LH + ++G+V
Sbjct: 3527 -------RKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQV-------------------- 3559
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
Y WG N++G G G+ V P V G V++V+CG H+ A
Sbjct: 3560 ----------YAWGDNDHGQQGSGNTIVNKKPSLVLG-LDGIFVNRVACGSSHSVA 3604
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 175/391 (44%), Gaps = 59/391 (15%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A +A GG TL+ +T G +YATG
Sbjct: 4382 WGHNHRGQLG-GLDGSRIKMPTPCEALSLLRPIQIA-GGEQTLYAVTPDGKLYATGYGAG 4439
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI + +E L+ +KK V +++G H A++ DGE++ WG+ +G+LG
Sbjct: 4440 GRLGIGGTDSVTTPTLVESLQHVMIKK--VAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4497
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + + P +E LSGI A G S +T G VL+WG G GRLGHG
Sbjct: 4498 HGNRDS--YDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGD--- 4552
Query: 217 ILGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4553 ------SEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 4606
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG G+ D + P+
Sbjct: 4607 SDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPK 4666
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+V + ++ G H A S+ G++ TW G + GQLG G
Sbjct: 4667 KVAA-LQGKKIISIATGSLHCVACSDGGEVFTW------------GDNDEGQLGDGTVSA 4713
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGALLEY 402
P +V + ++V CG HT AL Y
Sbjct: 4714 IQRPRLVQSLQGKHIVKVICGSAHTLALSTY 4744
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 179/388 (46%), Gaps = 59/388 (15%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-TETGCVYATGLN 98
+WG D +LG G S+ + P S + LK + GG+ +LF+ ++ G +YA G
Sbjct: 3245 VWGLNDKEQLG-GLKGSKVKLPTYSSVLSQ--LKPIHIAGGSKSLFIVSQDGKLYACGEG 3301
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LG+ N P ++ L + VV+ + +G H+ A+T+DG+++ WG+ +G+L
Sbjct: 3302 TNGRLGLGHNNNVP-TPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3360
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + + P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 3361 GHGNRL--TLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD-- 3416
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGD--------- 264
+ ++ P+L+ L +V A G + C+ E G V+ +GD
Sbjct: 3417 -------NCTQLKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRG 3469
Query: 265 --------RAVDKM-----LFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSP 311
V+++ + E +L GE++TWG + LG G+ + P
Sbjct: 3470 GSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKP 3529
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+QG V V+ G H A+++ G++ WG ++ H GQ G GN +
Sbjct: 3530 TPIQG-LRGKKVIHVAVGALHCLAVTDSGQVYAWG---------DNDH---GQQGSGNTI 3576
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHTGA 398
P++V + + +V+CG +H+ A
Sbjct: 3577 VNKKPSLVLGLDGIFVNRVACGSSHSVA 3604
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 113/250 (45%), Gaps = 53/250 (21%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++ WG N GQLG G ++ I +PT E LS + Q A G + AVT GK+ + G
Sbjct: 4379 IFGWGHNHRGQLG-GLDGSR-IKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGY 4436
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G GRLG G S+ TP L++ L+ V +K A C+
Sbjct: 4437 GAGGRLGIGGTDSV---------TTPTLVESLQHVMIKKVAVNSGGKHCL---------- 4477
Query: 264 DRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
+L S GE+++WG E+G LG G+ D P+ ++ S V
Sbjct: 4478 ------------------ALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEA-LSGIGV 4518
Query: 324 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 382
++CG H+A I S+G +LTWG G G+LGHG+ D + P +V
Sbjct: 4519 IDIACGSAHSACITSQGHVLTWGKG------------RYGRLGHGDSEDQLQPKLVEALL 4566
Query: 383 NVKALQVSCG 392
+A+ ++CG
Sbjct: 4567 GYRAIDIACG 4576
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 75/141 (53%), Gaps = 6/141 (4%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYH 133
A C G H L LT TG V++ G + G+LG + + P RI L +++V + G
Sbjct: 634 AAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDI-PTRIVALAERQVTGVFCGSS 692
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVA 191
+S+AIT GELY WG+ + G+LG G K +PT V+ L ALG S+
Sbjct: 693 YSAAITAAGELYTWGRGTYGRLGHGNSEDK--HLPTIVQVLKQQRVIHVALGCGDAHSLC 750
Query: 192 VTGGGKVLSWGAGGSGRLGHG 212
VT G V +WG G G+LG+G
Sbjct: 751 VTDTGIVYAWGDGDFGKLGNG 771
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 99/227 (43%), Gaps = 20/227 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNG+ GRLG G S+ P A + + + CG +++ +T G +Y G +G+
Sbjct: 654 WGNGEGGRLGHGDTSSKDIPTRIVALAERQVTGVFCGSSYSAAITAAGELYTWGRGTYGR 713
Query: 103 LGISENIGYSLEPLRISGLKKEV---VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG + L P + LK++ V + G HS +T G +Y WG G+LG G
Sbjct: 714 LGHGNSEDKHL-PTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGT 772
Query: 160 KAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+P+ ++ +C G + F SVA+ G V SWG
Sbjct: 773 CNGSSVPVAIELPQCSDGAVKVFSGSHF--SVALGRDGTVYSWGK-----------GHGG 819
Query: 219 GFLRSTSEYT--PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
SE+T P+ I+ LEG + A G H + +G +Y +G
Sbjct: 820 RLGHGHSEHTASPKAIQALEGKNIVDLAVGLAHCLALTASGELYGWG 866
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 87/197 (44%), Gaps = 38/197 (19%)
Query: 223 STSEYTPRLIKELEGVKVKIAAAG---------------FLHSAC--IDENGRVYIFGDR 265
STS Y+ I+ GV+V+ A HS C D I G
Sbjct: 567 STSRYSTATIELPAGVQVRQVACSETSIYILTTTGQVLSLQHSNCHTPDTTAPKPIEGLE 626
Query: 266 AVDKMLFQ---EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
+V+ + EG H +L + G++++WG+ E G LG G P R+ +E
Sbjct: 627 SVNIVQLAAHCEGRHVL--ALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVA-LAERQ 683
Query: 323 VDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
V V CG ++AAI+ G++ TWG GT+ G+LGHGN D PTIV
Sbjct: 684 VTGVFCGSSYSAAITAAGELYTWG----RGTY--------GRLGHGNSEDKHLPTIVQVL 731
Query: 382 ENVKALQVS--CGFNHT 396
+ + + V+ CG H+
Sbjct: 732 KQQRVIHVALGCGDAHS 748
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 71/185 (38%), Gaps = 45/185 (24%)
Query: 168 PTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P +E L + Q A E +A+T G V SWG G GRLGHG S S
Sbjct: 619 PKPIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTS---------S 669
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
+ P I L +V G +SA I +
Sbjct: 670 KDIPTRIVALAERQVTGVFCGSSYSAAI------------------------------TA 699
Query: 286 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS--CGWKHTAAISE-GKIL 342
GELYTWG G LG G+ + H P VQ + V V+ CG H+ +++ G +
Sbjct: 700 AGELYTWGRGTYGRLGHGNSEDKHLPTIVQV-LKQQRVIHVALGCGDAHSLCVTDTGIVY 758
Query: 343 TWGWG 347
WG G
Sbjct: 759 AWGDG 763
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 83/197 (42%), Gaps = 21/197 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAH-TLFLTETGCVYA--TGLND 99
WG+GD+G+LG G+ PV + G+H ++ L G VY+ G
Sbjct: 760 WGDGDFGKLGNGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALGRDGTVYSWGKGHGG 819
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G SE ++ P I L+ K +V ++ G H A+T GELY WG+N Q L
Sbjct: 820 RLGHGHSE---HTASPKAIQALEGKNIVDLAVGLAHCLALTASGELYGWGRNDFQQ--LC 874
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
PI L I T L A GG + + W S LG + +
Sbjct: 875 PPCVTRDPI-----VLLPILTTPPTLRIAGMAA--GGAQSIVW--CHSSTLGIPVK---I 922
Query: 219 GFLRSTSEYTPRLIKEL 235
F+ SE+T RL+ +L
Sbjct: 923 PFVVDLSEHTFRLLDQL 939
>gi|301767480|ref|XP_002919156.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Ailuropoda melanoleuca]
Length = 551
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++G K V I+ G S A+ GE+Y+WG N NGQLGLG
Sbjct: 183 QVGSGSTANQPI-PRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS 241
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P ++ L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 242 SGNQ--PTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 293
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y +I E + + ++IAA H SA + G VY++G
Sbjct: 294 --KSNQSYPAPVIVEKDRI-IEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 113/219 (51%), Gaps = 16/219 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V +++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++ TP I L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 244 NQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 146/347 (42%), Gaps = 60/347 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 30 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 88
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 89 PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 149 -LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW 292
+ C+ V I A +M ++++ GE+Y W
Sbjct: 199 -----------------TGCLQNKVAVNI----ACGQMCSM--------AVVNTGEVYVW 229
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 351
G N NG LG+GS +P R+ V +V+CG+ HT ++ EG++ WG
Sbjct: 230 GYNGNGQLGLGSSGNQPTPCRI-AALQGIRVQRVACGYAHTLVLTDEGQVYAWG------ 282
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +P V ++ +C HT A
Sbjct: 283 ------ANSYGQLGTGNKSNQSYPAPVIVEKDRIIEIAACHSAHTSA 323
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PAPVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 341 --SVVLPHLTHFSCTDDVF 357
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 110/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ LSG K A L + V T
Sbjct: 62 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIACLSYGSGPHIVLATTE 117
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEV--------ACGSYHSLV--- 166
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 167 ---------------------------LTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199
Query: 316 GPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G ++CG + A ++ G++ WG+ G+ GQLG G+ +
Sbjct: 200 GCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGN------------GQLGLGSSGNQPT 247
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P + + ++ +V+CG+ HT L +
Sbjct: 248 PCRIAALQGIRVQRVACGYAHTLVLTD 274
>gi|26327145|dbj|BAC27316.1| unnamed protein product [Mus musculus]
Length = 551
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 115/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++G K V+ IS G S A+ GE+Y+WG N NGQLGLG
Sbjct: 183 QVGSGSTANQPI-PRRVTGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYNGNGQLGLGS 241
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G++ +WGA G+LG G
Sbjct: 242 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGN------ 293
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y ++ E + + ++IAA H SA + G VY++G
Sbjct: 294 --KSNQSYPTPVVVEKDRI-IEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 115/219 (52%), Gaps = 16/219 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG+G ++S P + + +L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL + G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++ TP + L+G++V+ A G+ H+ + + G++Y +G
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 146/347 (42%), Gaps = 60/347 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + I ++E
Sbjct: 30 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQSTIE 88
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T DGE++ WG N+ QLG G ++P
Sbjct: 89 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 149 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW 292
+ C+ +N V + M +++ GE+Y W
Sbjct: 199 -----------------TGCL-QNKVVMNISCGQMCSM-----------AVVDTGEVYVW 229
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 351
G N NG LG+GS +P RV V +V+CG+ HT ++ EG+I WG
Sbjct: 230 GYNGNGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQIYAWG------ 282
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 283 ------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 323
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 113/267 (42%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N +G LG+G + + P +++ L+G K A+L + V T
Sbjct: 62 TVNDEIFVLGTNCSGCLGVGDIQSTIEP--RRLDSLTG--KKIASLSYGSGPHIVLATTD 117
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLV--- 166
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 167 ---------------------------LTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V +SCG + A+ + G++ WG+ G+ GQLG G+ +
Sbjct: 200 GCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYNGN------------GQLGLGSSGNQPT 247
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTD 274
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHHTHFCCTDDVF 357
>gi|224043366|ref|XP_002198142.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Taeniopygia
guttata]
Length = 537
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 135/300 (45%), Gaps = 47/300 (15%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A + +L+ G G H + TE G VYA G N + QLG + N
Sbjct: 60 LGTGDNQSTIVPKKLEALCGKKISSLSYGSGPHVVLCTEDGEVYAWGHNGYSQLGNGTTN 119
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+VV+++ G HHS A+++DG+LY WG N+ GQ+G G A + P P
Sbjct: 120 QGITPVQVCTNLLIKKVVEVACGSHHSMALSMDGDLYAWGYNNCGQVGSGSTANQ--PTP 177
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
+V CL G A G S+AV G+V WG G+G+LG G + L
Sbjct: 178 RRVSNCLQGKIVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQL--------- 228
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
TP + L V V A G+ H+ +L G
Sbjct: 229 TPCRVAALHSVCVLQIACGYAHTL------------------------------ALTDEG 258
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTWG 345
LY WG+N G LG G+ SP ++ E V+ +C HT+A G++ WG
Sbjct: 259 LLYAWGANTYGQLGTGNKSNQLSPVQIMME-KERVVEIAACHSAHTSAAKTQSGQVYMWG 317
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 123/239 (51%), Gaps = 16/239 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L+ G +YA G N+ G
Sbjct: 105 WGHNGYSQLGNGTTNQGITPVQVCTNLLIKKVVEVACGSHHSMALSMDGDLYAWGYNNCG 164
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P R+S K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 165 QVG-SGSTANQPTPRRVSNCLQGKIVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGN 223
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +V L + Q A G+ ++A+T G + +WGA G+LG G +S+ L
Sbjct: 224 NGNQL--TPCRVAALHSVCVLQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLS 281
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFGDRAVDKMLFQEGNH 277
+ +++ E E V V+IAA H SA ++G+VY++G + F H
Sbjct: 282 PV--------QIMMEKERV-VEIAACHSAHTSAAKTQSGQVYMWGQCRGQSVTFPHLTH 331
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 126/293 (43%), Gaps = 59/293 (20%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + IT E++++G N + LG G + + +P K+E
Sbjct: 19 LSPQEIASIRKACV-FGTSANEAIYITHSDEVFVFGLNCSNCLGTGDNQSTI--VPKKLE 75
Query: 173 CLSGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
L G K ++L + V T G+V +WG G +LG+G + + ++ T
Sbjct: 76 ALCG--KKISSLSYGSGPHVVLCTEDGEVYAWGHNGYSQLGNGTTNQGITPVQVC---TN 130
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
LIK KV A G HS +L G+L
Sbjct: 131 LLIK-----KVVEVACGSHHSM------------------------------ALSMDGDL 155
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWGWGG 348
Y WG N G +G GS +P RV V ++CG + A ++ G++ WG+ G
Sbjct: 156 YAWGYNNCGQVGSGSTANQPTPRRVSNCLQGKIVVGIACGQTSSMAVVNNGEVYGWGYNG 215
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ GQLG GN+ + + P V +V LQ++CG+ HT AL +
Sbjct: 216 N------------GQLGLGNNGNQLTPCRVAALHSVCVLQIACGYAHTLALTD 256
>gi|91203943|emb|CAJ71596.1| similar to regulator of chromosome condensation [Candidatus
Kuenenia stuttgartiensis]
Length = 387
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 133/283 (46%), Gaps = 39/283 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS +S P+ E + A++CGG H L L G V+A G+ND GQ
Sbjct: 111 WGGNWAGQLGDGSYKSSNIPIKTK--ELSGIIAISCGGQHNLALKSDGTVWAWGINDKGQ 168
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LGI + + P+RI GL +V IS G +HS AI DG L+ WG N+ QLG G
Sbjct: 169 LGIGDAKNQQI-PIRIPGL-NNIVAISAGGYHSLAIKSDGSLWAWGSNNMEQLGDGSATN 226
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L I G + S+A+ G +++WG+ G +LG G
Sbjct: 227 RCSPV--HVSNLRDIIAVNG--GGDFSLALKSDGTIMAWGSNGLSQLGDGT--------- 273
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ TP + ++ + ++IAA G HS + G+V+ FG + A RP
Sbjct: 274 TTNRNTPVNVSDVRDI-IEIAAKGN-HSLALTIEGKVWEFGSIGATPTEKEVTLPAYRPV 331
Query: 283 LI--------------------SGGELYTWGSNENGCLGIGSI 305
L+ + G L+ WG N G LG G++
Sbjct: 332 LVNEITDVIAIACGEFHNVVLKNDGSLWVWGINNFGQLGDGTV 374
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 156/359 (43%), Gaps = 59/359 (16%)
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
V ++F +A G HTL L G +++ G N++GQLG I P+++ L
Sbjct: 30 VKTSFAVQVAPKIAAGAFHTLALKPDGSLWSWGKNEYGQLG-DGTIKNKHSPVQVKHLSS 88
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V I G HS A+ DG ++ WG N GQLG G + IPI TK LSGI +
Sbjct: 89 IIV-IDGGAWHSIALKSDGTVWAWGGNWAGQLGDGSYKSSNIPIKTKE--LSGIIA--IS 143
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + ++A+ G V +WG G+LG G + ++ P I L + V I+
Sbjct: 144 CGGQHNLALKSDGTVWAWGINDKGQLGIGD---------AKNQQIPIRIPGLNNI-VAIS 193
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------------------- 282
A G+ HS I +G ++ +G ++++ +G+ R S
Sbjct: 194 AGGY-HSLAIKSDGSLWAWGSNNMEQL--GDGSATNRCSPVHVSNLRDIIAVNGGGDFSL 250
Query: 283 -LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 340
L S G + WGSN LG G+ ++P V + +++ H+ A++ EGK
Sbjct: 251 ALKSDGTIMAWGSNGLSQLGDGTTTNRNTPVNVS---DVRDIIEIAAKGNHSLALTIEGK 307
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ W +G T +E + + P +VN E + ++CG H L
Sbjct: 308 V--WEFGSIGATPTEKEVT----------LPAYRPVLVN--EITDVIAIACGEFHNVVL 352
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 12/129 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +LG G+ +R PV S + + +A G H+L LT G V+ +FG
Sbjct: 261 WGSNGLSQLGDGTTTNRNTPVNVS--DVRDIIEIAAKGNHSLALTIEGKVW-----EFGS 313
Query: 103 LGIS----ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G + E + P+ ++ + +V+ I+ G H+ + DG L++WG N+ GQLG G
Sbjct: 314 IGATPTEKEVTLPAYRPVLVNEIT-DVIAIACGEFHNVVLKNDGSLWVWGINNFGQLGDG 372
Query: 159 KKAAKVIPI 167
+K P+
Sbjct: 373 TVGSKTKPV 381
>gi|327261091|ref|XP_003215365.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Anolis
carolinensis]
Length = 530
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 137/304 (45%), Gaps = 45/304 (14%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P + +++L+ G G H + TE G VYA G N + QLG + N
Sbjct: 53 LGTGDNQSTIVPKKLESLSGKRIRSLSYGSGPHVVLSTEDGEVYAWGHNGYSQLGNGTTN 112
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+V++++ G HHS A++ DG++Y WG N+ GQ+G G A + P P
Sbjct: 113 QGVTPIQVCTNLLIKKVIEVACGSHHSLALSSDGDVYAWGYNNCGQVGSGSTANQ--PTP 170
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G SVA+ G+V WG G+G+LG G + L
Sbjct: 171 RKVSNCLQTKIVVSIACGQTSSVAIVDNGEVYGWGYNGNGQLGLGNNGNQL--------- 221
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
TP + L+GV + A G+ H+ +L G
Sbjct: 222 TPCRVAALQGVCIMQIACGYAHTL------------------------------ALTDEG 251
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 347
+Y+WG+N G LG G+ SP ++ E V+ +C HT+A L + WG
Sbjct: 252 LMYSWGANTYGQLGTGNKSNQLSPGQILME-KERVVEIAACHSAHTSAAKTQSGLVYMWG 310
Query: 348 GSHG 351
G
Sbjct: 311 QCRG 314
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 121/226 (53%), Gaps = 18/226 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H+L L+ G VYA G N+ G
Sbjct: 98 WGHNGYSQLGNGTTNQGVTPIQVCTNLLIKKVIEVACGSHHSLALSSDGDVYAWGYNNCG 157
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P ++S K VV I+ G S AI +GE+Y WG N NGQLGLG
Sbjct: 158 QVG-SGSTANQPTPRKVSNCLQTKIVVSIACGQTSSVAIVDNGEVYGWGYNGNGQLGLGN 216
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +V L G+ Q A G+ ++A+T G + SWGA G+LG G +S+ L
Sbjct: 217 NGNQL--TPCRVAALQGVCIMQIACGYAHTLALTDEGLMYSWGANTYGQLGTGNKSNQL- 273
Query: 220 FLRSTSEYTP-RLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+P +++ E E V V+IAA H SA ++G VY++G
Sbjct: 274 --------SPGQILMEKERV-VEIAACHSAHTSAAKTQSGLVYMWG 310
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 55/291 (18%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + IT + E++++G N + LG G + + +P K+E
Sbjct: 12 LSPQEIATIRKACV-FGTSANEAIYITHNDEVFVFGLNCSNCLGTGDNQSTI--VPKKLE 68
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
LSG + + G V + T G+V +WG G +LG+G + + ++ T L
Sbjct: 69 SLSGKRIRSLSYGSGPHVVLSTEDGEVYAWGHNGYSQLGNGTTNQGVTPIQVC---TNLL 125
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYT 291
IK KV A G HS +L S G++Y
Sbjct: 126 IK-----KVIEVACGSHHSL------------------------------ALSSDGDVYA 150
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 350
WG N G +G GS +P +V V ++CG + AI + G++ WG+ G+
Sbjct: 151 WGYNNCGQVGSGSTANQPTPRKVSNCLQTKIVVSIACGQTSSVAIVDNGEVYGWGYNGN- 209
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GQLG GN+ + + P V + V +Q++CG+ HT AL +
Sbjct: 210 -----------GQLGLGNNGNQLTPCRVAALQGVCIMQIACGYAHTLALTD 249
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 74/138 (53%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P +A + + +ACG AHTL LT+ G +Y+ G N +GQ
Sbjct: 204 WGYNGNGQLGLGNNGNQLTPCRVAALQGVCIMQIACGYAHTLALTDEGLMYSWGANTYGQ 263
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P +I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 264 LG-TGNKSNQLSPGQILMEKERVVEIAACHSAHTSAAKTQSGLVYMWGQ-CRGQ------ 315
Query: 161 AAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 316 -SVVLPHVTHFSCTDDVF 332
>gi|23271234|gb|AAH38104.1| RCBTB1 protein [Homo sapiens]
Length = 355
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 139/300 (46%), Gaps = 47/300 (15%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P P
Sbjct: 114 QGIATVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + +
Sbjct: 172 RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGN---------QL 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
TP V++AA LHS C+++ + G +A +L G
Sbjct: 223 TP----------VRVAA---LHSVCVNQ----IVCG-------------YAHTLALTDEG 252
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 345
LY WG+N G LG G+ + L SP + E V+ +C HT+A G + WG
Sbjct: 253 LLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 137/312 (43%), Gaps = 51/312 (16%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKVCV-FGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 GLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIATVQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V A G HS + +G V+ +G ++ G+ A +P+
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV S V+Q+
Sbjct: 180 IKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG ++ GQLG GN + + P + +
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHIMVEKERVV 287
Query: 387 LQVSCGFNHTGA 398
+C HT A
Sbjct: 288 EIAACHSAHTSA 299
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
>gi|340502738|gb|EGR29393.1| rcc1 family hect domain protein, putative [Ichthyophthirius
multifiliis]
Length = 879
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 145/326 (44%), Gaps = 73/326 (22%)
Query: 64 VCSAF-EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL- 121
+ AF +K +K + CG HT+F+TE G +Y+ G+ ++G LG I YS P I
Sbjct: 88 IFQAFNDKGQIKKMVCGKKHTVFITEEGKIYSYGIGEYGSLGHGGLI-YSDIPKNIIKFN 146
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF--- 178
+K+++QI+ G H+ A+T +LY WG+ GQLG GK A C IF
Sbjct: 147 QKKIIQITCGEFHTLALTDTYDLYSWGRGFEGQLGTGKDCASF-------PCYVSIFYQK 199
Query: 179 ------------TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
K A G S+A++ G + +WG G+ G+G +S SE
Sbjct: 200 YDYENKKDQKKIVKYIACGAYHSLAISDDGILYAWGEARLGQTGNG---------KSKSE 250
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
P+++ +K +EN DK++ G + +++
Sbjct: 251 KYPKIVNFGNNLK--------------EEN--------ILEDKIICVSGGYGHSAAVLES 288
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPF--SESPV-DQVSCGWKHTAAISEGKILT 343
GELYTWG N NG LG GSI + P++V + P+ V CG+ +T AI L
Sbjct: 289 GELYTWGLNFNGQLGHGSIKSSYFPQKVVKDILGNNIPLFKTVQCGYNNTFAIDINGQL- 347
Query: 344 WGWGGSHGTFSEDGHSSGGQLGHGND 369
W WG GG LGH N+
Sbjct: 348 WSWG-------------GGNLGHKNN 360
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 116/248 (46%), Gaps = 43/248 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G G+YG LG G L P F + + + CG HTL LT+T +Y+ G GQ
Sbjct: 120 YGIGEYGSLGHGGLIYSDIPKNIIKFNQKKIIQITCGEFHTLALTDTYDLYSWGRGFEGQ 179
Query: 103 LGISEN---------IGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSN 152
LG ++ I Y +K++V+ I+ G +HS AI+ DG LY WG+
Sbjct: 180 LGTGKDCASFPCYVSIFYQKYDYENKKDQKKIVKYIACGAYHSLAISDDGILYAWGEARL 239
Query: 153 GQLGLGKKAAKVIP--------------IPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
GQ G GK ++ P + K+ C+SG G+ S AV G++
Sbjct: 240 GQTGNGKSKSEKYPKIVNFGNNLKEENILEDKIICVSG--------GYGHSAAVLESGEL 291
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV---KIAAAGFLHSACIDE 255
+WG +G+LGHG S S + +++K++ G + K G+ ++ ID
Sbjct: 292 YTWGLNFNGQLGHGSIKS--------SYFPQKVVKDILGNNIPLFKTVQCGYNNTFAIDI 343
Query: 256 NGRVYIFG 263
NG+++ +G
Sbjct: 344 NGQLWSWG 351
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 89/192 (46%), Gaps = 29/192 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF-----------EKHSLKALACGGAHTLFLTETGC 91
WG G G+LG G + + P S F +K +K +ACG H+L +++ G
Sbjct: 172 WGRGFEGQLGTGKDCASF-PCYVSIFYQKYDYENKKDQKKIVKYIACGAYHSLAISDDGI 230
Query: 92 VYATGLNDFGQLGISE----------NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
+YA G GQ G + N G +L+ I L+ +++ +S GY HS+A+
Sbjct: 231 LYAWGEARLGQTGNGKSKSEKYPKIVNFGNNLKEENI--LEDKIICVSGGYGHSAAVLES 288
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG--IFTKQAALGFEQSVAVTGGGKVL 199
GELY WG N NGQLG G + P + L K G+ + A+ G++
Sbjct: 289 GELYTWGLNFNGQLGHGSIKSSYFPQKVVKDILGNNIPLFKTVQCGYNNTFAIDINGQLW 348
Query: 200 SWGAGGSGRLGH 211
SWG G LGH
Sbjct: 349 SWGGGN---LGH 357
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 94/240 (39%), Gaps = 69/240 (28%)
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
K+ G + +V +T GK+ S+G G G LGHG G + S P+ I + K
Sbjct: 99 KKMVCGKKHTVFITEEGKIYSYGIGEYGSLGHG------GLIYSD---IPKNIIKFNQKK 149
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ G H+ +L +LY+WG G
Sbjct: 150 IIQITCGEFHTL------------------------------ALTDTYDLYSWGRGFEGQ 179
Query: 300 LGIGSIDVLHSPERV----QGPFSESPVDQ------VSCGWKHTAAISEGKILTWGWGGS 349
LG G D P V Q E+ DQ ++CG H+ AIS+ IL + WG
Sbjct: 180 LGTGK-DCASFPCYVSIFYQKYDYENKKDQKKIVKYIACGAYHSLAISDDGIL-YAWG-- 235
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA--------LQVSCGFNHTGALLE 401
+ GQ G+G +P IVNFG N+K + VS G+ H+ A+LE
Sbjct: 236 --------EARLGQTGNGKSKSEKYPKIVNFGNNLKEENILEDKIICVSGGYGHSAAVLE 287
>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Metaseiulus occidentalis]
Length = 1152
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 147/325 (45%), Gaps = 38/325 (11%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ D+ +LG ++ PV +A + + + CG H++ LTE G VY G N GQL
Sbjct: 76 GSNDHDQLGQEVSTTKPEPV--TALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQL 133
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G E L P + L VVQI+ G +H A+ +G LY WG N NGQLG+G
Sbjct: 134 GNGEGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDNGNGQLGIGT-VG 192
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P +V L G+ Q A G S+ ++ G + WG S R G LG
Sbjct: 193 EPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWG---SNRFGQ------LGLSD 243
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR--- 279
+ P L+K L VK AAG HSA + +G V+ FG F E + R
Sbjct: 244 NKDRAFPTLLKTLRQQHVKFIAAGGAHSAALTAHGGVFTFG------WSFYESHEVRISL 297
Query: 280 -----RPSLISGGELYTWGSNE--------NGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
P +L++ E G LG GS + +P ++Q + + Q+
Sbjct: 298 RGTESNPQSALARKLFSLIEREFCRHSYGSYGQLGHGSKNDQLTPMKIQELMGTT-ITQI 356
Query: 327 SCGWKHTA--AISEGKILTWGWGGS 349
+ G HT A + GK+ T+G GG+
Sbjct: 357 ALGRCHTVCYAPTVGKVFTFGLGGN 381
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 159/386 (41%), Gaps = 75/386 (19%)
Query: 43 WGNGDYGRLGLGSLESRWR--PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+GN + G LGLG +E P E ++ +A G HTL LT G V + G ND
Sbjct: 21 FGNTNSGELGLGGIEDHIVRVPRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSNDH 80
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + + +P ++ L+ +VQ+ G HS A+T G++YMWG NS GQLG G+
Sbjct: 81 DQLGQEVS---TTKPEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGE 137
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P V+ L+ Q A G +A+ G + +WG G+G+LG G
Sbjct: 138 GQESRLS-PRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDNGNGQLGIGTVGE--- 193
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ P + L G+ + A G HS + ++G +++
Sbjct: 194 -----PQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFV------------------ 230
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
WGSN G LG+ P ++ + V ++ G H+AA++
Sbjct: 231 ------------WGSNRFGQLGLSDNKDRAFPTLLKT-LRQQHVKFIAAGGAHSAALTAH 277
Query: 339 GKILTWGWG--GSH-------GT-------------------FSEDGHSSGGQLGHGNDV 370
G + T+GW SH GT F + S GQLGHG+
Sbjct: 278 GGVFTFGWSFYESHEVRISLRGTESNPQSALARKLFSLIEREFCRHSYGSYGQLGHGSKN 337
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHT 396
D + P + Q++ G HT
Sbjct: 338 DQLTPMKIQELMGTTITQIALGRCHT 363
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 122/281 (43%), Gaps = 65/281 (23%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V QI+TG HH+ +T G + G N + QLG K P+ T ++CL + Q
Sbjct: 53 VRQIATGAHHTLVLTSHGRVLSCGSNDHDQLGQEVSTTKPEPV-TALQCLRIV---QVCC 108
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKI 242
G + S+A+T G+V WG+ G+LG+G QES + +PR +K L V
Sbjct: 109 GQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESRL----------SPRFVKTLAPFTVVQ 158
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGI 302
A G H C+ +L++ G LY WG N NG LGI
Sbjct: 159 IACGSNH--CL----------------------------ALLNNGALYAWGDNGNGQLGI 188
Query: 303 GSIDVLHSPERVQGPFSE---SPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
G++ P+RV + P+ Q++CG H+ +S+ G I W G
Sbjct: 189 GTVG---EPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVW------------GS 233
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ GQLG ++ D PT++ ++ G H+ AL
Sbjct: 234 NRFGQLGLSDNKDRAFPTLLKTLRQQHVKFIAAGGAHSAAL 274
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 77/170 (45%), Gaps = 15/170 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ +G+LGL + R P + + +K +A GGAH+ LT G V+ G +
Sbjct: 230 VWGSNRFGQLGLSDNKDRAFPTLLKTLRQQHVKFIAAGGAHSAALTAHGGVFTFGWS--- 286
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
Y +RIS L+ + ++ E S GQLG G K
Sbjct: 287 --------FYESHEVRIS-LRGTESNPQSALARKLFSLIEREFCRHSYGSYGQLGHGSKN 337
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG-GKVLSWGAGGSGRLG 210
++ P+ K++ L G Q ALG +V GKV ++G GG+G+LG
Sbjct: 338 DQLTPM--KIQELMGTTITQIALGRCHTVCYAPTVGKVFTFGLGGNGQLG 385
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 83/204 (40%), Gaps = 54/204 (26%)
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
L +G SG LG LG + PR I +LEG++V+ A G H+ + +GR
Sbjct: 19 LGFGNTNSGELG-------LGGIEDHIVRVPRSIPQLEGIRVRQIATGAHHTLVLTSHGR 71
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
V G D+ L QE + +P ++ + CL I
Sbjct: 72 VLSCGSNDHDQ-LGQEVS-TTKPEPVTALQ----------CLRIV--------------- 104
Query: 319 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN-DVDYIHPT 376
QV CG +H+ A++E G++ WG +S GQLG+G + P
Sbjct: 105 ------QVCCGQQHSMALTEAGQVYMWG------------SNSKGQLGNGEGQESRLSPR 146
Query: 377 IVNFGENVKALQVSCGFNHTGALL 400
V +Q++CG NH ALL
Sbjct: 147 FVKTLAPFTVVQIACGSNHCLALL 170
>gi|219847607|ref|YP_002462040.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541866|gb|ACL23604.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 776
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 151/361 (41%), Gaps = 55/361 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D+GRLG GS PV S + A+A GGAHT LT +G V+ G N +GQ
Sbjct: 77 WGGNDFGRLGDGSYTDSSTPVAVSGLPS-GVTAIAAGGAHTCALTSSGEVWCWGSNFYGQ 135
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ +SGL V I+ G H+ A T G ++ WG N GQLG G
Sbjct: 136 LGDGSYTTRS-TPVAVSGLPSGVTAIAAGGWHTCARTSSGGVWCWGGNYRGQLGDGTTTD 194
Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P+ +SG+ ++ A+ G + A G+V WG G+LG G
Sbjct: 195 RSTPVA-----VSGLPSEVTAIAAGDAHTCARMSSGEVWCWGGNNYGQLGDGSY------ 243
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG----DRAVDKMLFQEGN 276
T TP + L IAA G +H+ + +G V +G + + + F
Sbjct: 244 ---TDSSTPVAVSGLPSGVTAIAAGG-VHTCALTGSGGVRCWGANYSGQLGNGLTFGRST 299
Query: 277 HARRPSLISG-----------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
L SG G ++ WG N +G LG G+ +P V G
Sbjct: 300 PGAVSGLPSGVTAIAAGDYHTCALTGSGGVWCWGGNYSGQLGDGTTTARSTPVAVSG--L 357
Query: 320 ESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
S V+ ++ G HT A+ S G + W GH+ GQLG G P V
Sbjct: 358 PSGVETIAAGDYHTCALMSSGGVRCW------------GHNDRGQLGDGTTTARSTPVAV 405
Query: 379 N 379
+
Sbjct: 406 S 406
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 161/381 (42%), Gaps = 53/381 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ D G+LG G+ +R PV S + A+A G HT T +G V+ G N GQ
Sbjct: 383 WGHNDRGQLGDGTTTARSTPVAVSGLPS-GVTAIAAGRLHTCARTSSGGVWCWGDNSDGQ 441
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S P+ +SGL V I+ G H+ A+T G ++ WG+N++GQLG G
Sbjct: 442 LG-DGSFTDSSTPVAVSGLASGVETIAAGGWHTCALTGSGGVWCWGRNNSGQLGDGSTIY 500
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L T AA G + A+TG G V WG +G+LG G
Sbjct: 501 HITPV--AVSGLPSGVTAIAAGGV-HTCALTGSGGVWCWGGNFAGQLGDGT--------- 548
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T TP + L V AAG +H+ + +G V+ +G ++ + P
Sbjct: 549 TTDRSTPVAVSGLP-SGVTAIAAGDIHTCALTGSGGVWCWGGNDFGQLGDGTTTNRSTPV 607
Query: 283 LISG---------------------GELYTWGSNENGCLGIGSIDVLHSPERVQG-PFSE 320
+SG G ++ WG N +G L G+ +P V G P
Sbjct: 608 AVSGLPSGVTAIAAGLRYTCALTGSGGVWCWGYNLSGQLDDGTTS-RSTPVAVSGLPSGV 666
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
+ + + GW A S G + WG GS GQLG G P V+
Sbjct: 667 TAI--AAGGWYTCARTSSGGVRCWGANGS------------GQLGDGTTTKRSTPVAVS- 711
Query: 381 GENVKALQVSCGFNHTGALLE 401
G ++ G HT AL+
Sbjct: 712 GLPSGVTAIAAGGEHTCALMS 732
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 149/358 (41%), Gaps = 50/358 (13%)
Query: 66 SAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
S+F + A+A GG HT T +G V+ G NDFG+LG S P+ +SGL
Sbjct: 47 SSFSPLQGVTAIAAGGGHTCARTSSGGVWCWGGNDFGRLGDGSYTDSS-TPVAVSGLPSG 105
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V I+ G H+ A+T GE++ WG N GQLG G + P+ V L T AA
Sbjct: 106 VTAIAAGGAHTCALTSSGEVWCWGSNFYGQLGDGSYTTRSTPV--AVSGLPSGVTAIAAG 163
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G+ + A T G V WG G+LG G +T TP + L +V A
Sbjct: 164 GW-HTCARTSSGGVWCWGGNYRGQLGDGT---------TTDRSTPVAVSGLP-SEVTAIA 212
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG------------------ 286
AG H+ +G V+ +G ++ + P +SG
Sbjct: 213 AGDAHTCARMSSGEVWCWGGNNYGQLGDGSYTDSSTPVAVSGLPSGVTAIAAGGVHTCAL 272
Query: 287 ---GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 343
G + WG+N +G LG G +P V G S V ++ G HT A++ G
Sbjct: 273 TGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSG--LPSGVTAIAAGDYHTCALT-GSGGV 329
Query: 344 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
W WGG++ GQLG G P V+ G ++ G HT AL+
Sbjct: 330 WCWGGNY----------SGQLGDGTTTARSTPVAVS-GLPSGVETIAAGDYHTCALMS 376
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 121/283 (42%), Gaps = 39/283 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG GS PV S + A+A GG HT LT +G V+ G N GQ
Sbjct: 485 WGRNNSGQLGDGSTIYHITPVAVSGLPS-GVTAIAAGGVHTCALTGSGGVWCWGGNFAGQ 543
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ +SGL V I+ G H+ A+T G ++ WG N GQLG G
Sbjct: 544 LGDGTTTDRS-TPVAVSGLPSGVTAIAAGDIHTCALTGSGGVWCWGGNDFGQLGDGTTTN 602
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L T AA G + A+TG G V WG SG+L G
Sbjct: 603 RSTPV--AVSGLPSGVTAIAA-GLRYTCALTGSGGVWCWGYNLSGQLDDG---------- 649
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSA--------CIDENGR--------------VY 260
+TS TP + L IAA G+ A C NG V
Sbjct: 650 TTSRSTPVAVSGLPSGVTAIAAGGWYTCARTSSGGVRCWGANGSGQLGDGTTTKRSTPVA 709
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G + + G H +L+S G ++ WG N++G LG G
Sbjct: 710 VSGLPSGVTAIAAGGEHTC--ALMSSGGVWCWGRNDSGQLGDG 750
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 152/378 (40%), Gaps = 50/378 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G R P S + A+A G HT LT +G V+ G N GQ
Sbjct: 281 WGANYSGQLGNGLTFGRSTPGAVSGLPS-GVTAIAAGDYHTCALTGSGGVWCWGGNYSGQ 339
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ +SGL V I+ G +H+ A+ G + WG N GQLG G A
Sbjct: 340 LGDGTTTARS-TPVAVSGLPSGVETIAAGDYHTCALMSSGGVRCWGHNDRGQLGDGTTTA 398
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L T AA G + A T G V WG G+LG G
Sbjct: 399 RSTPV--AVSGLPSGVTAIAA-GRLHTCARTSSGGVWCWGDNSDGQLGDGSF-------- 447
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T TP + L V+ AAG H+ + +G V+ +G ++ + P
Sbjct: 448 -TDSSTPVAVSGLA-SGVETIAAGGWHTCALTGSGGVWCWGRNNSGQLGDGSTIYHITPV 505
Query: 283 LISG---------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+SG G ++ WG N G LG G+ +P V G S
Sbjct: 506 AVSGLPSGVTAIAAGGVHTCALTGSGGVWCWGGNFAGQLGDGTTTDRSTPVAVSG--LPS 563
Query: 322 PVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
V ++ G HT A++ G W WGG+ F GQLG G + P V+ G
Sbjct: 564 GVTAIAAGDIHTCALT-GSGGVWCWGGND--F--------GQLGDGTTTNRSTPVAVS-G 611
Query: 382 ENVKALQVSCGFNHTGAL 399
++ G +T AL
Sbjct: 612 LPSGVTAIAAGLRYTCAL 629
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D+G+LG G+ +R PV S + A+A G +T LT +G V+ G N GQ
Sbjct: 587 WGGNDFGQLGDGTTTNRSTPVAVSGLPS-GVTAIAAGLRYTCALTGSGGVWCWGYNLSGQ 645
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
L + P+ +SGL V I+ G ++ A T G + WG N +GQLG G
Sbjct: 646 L--DDGTTSRSTPVAVSGLPSGVTAIAAGGWYTCARTSSGGVRCWGANGSGQLGDGTTTK 703
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ---ESSILG 219
+ P+ V L T AA G E + A+ G V WG SG+LG G+ ++ +
Sbjct: 704 RSTPV--AVSGLPSGVTAIAA-GGEHTCALMSSGGVWCWGRNDSGQLGDGRPLYRTTPVD 760
Query: 220 FLRSTS--EYTPRLIK 233
+ S S Y P +++
Sbjct: 761 VVTSASWGVYLPMIVR 776
>gi|379719198|ref|YP_005311329.1| protein ChiA12 [Paenibacillus mucilaginosus 3016]
gi|378567870|gb|AFC28180.1| ChiA12 [Paenibacillus mucilaginosus 3016]
Length = 1205
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 132/291 (45%), Gaps = 37/291 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG GS R PV S+ A H+L L G V+A G N++GQ
Sbjct: 110 WGFNGYGQLGDGSTTGRNTPVQVEGL--RSIVGAAAHYDHSLALKSDGTVWAWGRNEYGQ 167
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG P+R+ GL VV IS+G+ +S A+ DG ++ WGKN GQLG G
Sbjct: 168 LGDGSKTDRHT-PVRVKGLDS-VVAISSGFGYSLAVKSDGTVWAWGKNEYGQLGNGSTTQ 225
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P+ +V+ L + A G ++A+ G V SWG +G+LG G +
Sbjct: 226 SSAPV--QVQGLHSV--TAVASGDYHNLAIKRDGTVWSWGPNLAGQLGDGSD-------- 273
Query: 223 STSEYTPRLIKELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
YTP ++EG + AGF HS + +G V+ +G+ ++ F +
Sbjct: 274 -MDRYTP---VQVEGFSSAVDVDAGFGHSLALKSDGTVWAWGNYQFNEWGFGSSTPVQVQ 329
Query: 282 SLIS----------------GGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
L S G ++ WG N+NG LG G+ +P +VQG
Sbjct: 330 ELDSVVDIAAGTQHSLAVRNDGTVWAWGKNDNGQLGDGTSTARLTPIKVQG 380
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 141/298 (47%), Gaps = 53/298 (17%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
G+LG GS PV + HS++A+A GG+H L + G V+A G N +GQLG
Sbjct: 66 GQLGNGSTTGSPAPVQVQ--DLHSVEAIAAGGSHNLAIKSDGTVWAWGFNGYGQLGDGST 123
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + P+++ GL+ +V + Y HS A+ DG ++ WG+N GQLG G K + P+
Sbjct: 124 TGRNT-PVQVEGLRS-IVGAAAHYDHSLALKSDGTVWAWGRNEYGQLGDGSKTDRHTPV- 180
Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
+V+ L + + G+ S+AV G V +WG G+LG+G +T
Sbjct: 181 -RVKGLDSVVAISSGFGY--SLAVKSDGTVWAWGKNEYGQLGNGS---------TTQSSA 228
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGE 288
P ++ L V A+G H+ I +G V
Sbjct: 229 PVQVQGLHSVTA--VASGDYHNLAIKRDGTV----------------------------- 257
Query: 289 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 345
++WG N G LG GS ++P +V+G FS S VD V G+ H+ A+ S+G + WG
Sbjct: 258 -WSWGPNLAGQLGDGSDMDRYTPVQVEG-FS-SAVD-VDAGFGHSLALKSDGTVWAWG 311
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 152/351 (43%), Gaps = 70/351 (19%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG 110
L L ++ VV + ++ A G +HTL L G V+A G GQLG G
Sbjct: 19 LPLQAVADESDSVVAAKSTYSGIRMAAGGESHTLALNANGTVWAWG---GGQLGNGSTTG 75
Query: 111 YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
S P+++ L V I+ G H+ AI DG ++ WG N GQLG G + P+ +
Sbjct: 76 -SPAPVQVQDLHS-VEAIAAGGSHNLAIKSDGTVWAWGFNGYGQLGDGSTTGRNTPV--Q 131
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
VE L I AA ++ S+A+ G V +WG G+LG G + T +TP
Sbjct: 132 VEGLRSIV--GAAAHYDHSLALKSDGTVWAWGRNEYGQLGDGSK---------TDRHTPV 180
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
+K L+ V V I++ GF +S + +G V+
Sbjct: 181 RVKGLDSV-VAISS-GFGYSLAVKSDGTVW------------------------------ 208
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGS 349
WG NE G LG GS +P +VQG S V V+ G H AI +G + +WG
Sbjct: 209 AWGKNEYGQLGNGSTTQSSAPVQVQGLHS---VTAVASGDYHNLAIKRDGTVWSWG---- 261
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVN-FGENVKALQVSCGFNHTGAL 399
+ GQLG G+D+D P V F A+ V GF H+ AL
Sbjct: 262 --------PNLAGQLGDGSDMDRYTPVQVEGFS---SAVDVDAGFGHSLAL 301
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS R+ PV F S + G H+L L G V+A G F +
Sbjct: 260 WGPNLAGQLGDGSDMDRYTPVQVEGFS--SAVDVDAGFGHSLALKSDGTVWAWGNYQFNE 317
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G S P+++ L VV I+ G HS A+ DG ++ WGKN NGQLG G A
Sbjct: 318 WGFG-----SSTPVQVQELDS-VVDIAAGTQHSLAVRNDGTVWAWGKNDNGQLGDGTSTA 371
Query: 163 KVIPIPTKVECLSG 176
++ PI KV+ G
Sbjct: 372 RLTPI--KVQGFGG 383
>gi|159037224|ref|YP_001536477.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157916059|gb|ABV97486.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 558
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 160/386 (41%), Gaps = 57/386 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG GS +R PV S ++ A+A G +H+L LT G V A G N+FGQ
Sbjct: 62 WGANNVGQLGDGSTIARNAPVAVSLPPDTTVTAVAGGDSHSLALTSAGAVLAWGENNFGQ 121
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG N+ S+ P+ ++ VV I+ + HS A+T G + WG N+ GQLG G
Sbjct: 122 LGTGNNLNSSV-PITVALPPDTTVVAIAASHGHSLALTSAGAVLAWGANNVGQLGNGNTF 180
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P+ V G A G S+A+T G L+WG + LG
Sbjct: 181 NSNTPV--TVNLPPGTTVATIAAGTNHSLAITSTGAALAWGG---------NGNGQLGNN 229
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ + P + + AAG +S I G +G + ++ GN+A
Sbjct: 230 STATSLEPIAVTLPPSTTITAIAAGSSYSLAITSTGTALAWGGNSNGQL--GTGNNAD-- 285
Query: 282 SLI--------------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
SLI S G WG N G LGIG+ +P V
Sbjct: 286 SLIPIAVALPPGTTITSIAAGFTHSLAVTSTGTALAWGGNSRGQLGIGTTTNSDTPVIVN 345
Query: 316 GPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
P ++ + G+ H+ ++S G L WG FS GQLG GN+ + +
Sbjct: 346 LP-PDTTITTNDGGFFHSLGSMSTGAALAWG-----NNFS-------GQLGTGNNTNSLD 392
Query: 375 PTIVNFGENVKALQVSCGFNHTGALL 400
P V K ++ G H+ AL+
Sbjct: 393 PIAVALPSGTKITTIAAGGGHSLALV 418
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 90/266 (33%), Gaps = 73/266 (27%)
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+L+WGA G+LG G + + P + V A G HS +
Sbjct: 58 TILAWGANNVGQLGDGS---------TIARNAPVAVSLPPDTTVTAVAGGDSHSLALTSA 108
Query: 257 GRVYIFGDRAVDKM----------------------LFQEGNHARRPSLISGGELYTWGS 294
G V +G+ ++ + +H +L S G + WG+
Sbjct: 109 GAVLAWGENNFGQLGTGNNLNSSVPITVALPPDTTVVAIAASHGHSLALTSAGAVLAWGA 168
Query: 295 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTW--------- 344
N G LG G+ ++P V P + V ++ G H+ AI S G L W
Sbjct: 169 NNVGQLGNGNTFNSNTPVTVNLPPGTT-VATIAAGTNHSLAITSTGAALAWGGNGNGQLG 227
Query: 345 ------------------------GWGGSH-------GTFSEDGHSSGGQLGHGNDVDYI 373
G S+ GT G +S GQLG GN+ D +
Sbjct: 228 NNSTATSLEPIAVTLPPSTTITAIAAGSSYSLAITSTGTALAWGGNSNGQLGTGNNADSL 287
Query: 374 HPTIVNFGENVKALQVSCGFNHTGAL 399
P V ++ GF H+ A+
Sbjct: 288 IPIAVALPPGTTITSIAAGFTHSLAV 313
>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
Length = 1052
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 159/363 (43%), Gaps = 50/363 (13%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+LGLG +E+ P ++ +ACG HTLFLT G VYA G ND
Sbjct: 6 WGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNNDH 65
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + PL I L+ VV QI+ G HS A+T G++ WG N GQ+G
Sbjct: 66 HQLGHELP---TKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVG-HS 121
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
VI +P + L Q A G S+A+T G++ SWG+ G+LG +
Sbjct: 122 TDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDL-- 179
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P + + G+ + A G HS I ++ V+ +G ++ + +
Sbjct: 180 ----PHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRA 235
Query: 280 RPS----------------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
PS L + G ++T G+ G LG G+ + P R+
Sbjct: 236 YPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGASNNEMIP-RMVIE 294
Query: 318 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
S + QV+CG +HT A+ S G++ ++G G S GQLG N + P
Sbjct: 295 LMGSTITQVACGNRHTLALVPSGGRVYSFGLGAS------------GQLGTRNTISQTLP 342
Query: 376 TIV 378
+V
Sbjct: 343 KVV 345
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 121/277 (43%), Gaps = 53/277 (19%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
LY WG S+GQLGLG + I +P+++E +Q A G ++ +T G+V + G
Sbjct: 3 LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGN 62
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+LGH + P I EL+ V A G HS + E G++ +G
Sbjct: 63 NDHHQLGHELPTK-----------RPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWG 111
Query: 264 DR----------------------AVDKMLFQEG---NHARRPSLISGGELYTWGSNENG 298
D V + + Q NH+ +L S GELY+WGSN G
Sbjct: 112 DNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSL--ALTSCGELYSWGSNIYG 169
Query: 299 CLGIGSI-DVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSE 355
LG+ S D+ HS P R+ P+ ++CG H+ IS+ + +GW
Sbjct: 170 QLGVQSPKDLPHSNAPLRLTTILG-IPLATIACGGNHSFLISKSSAV-FGW--------- 218
Query: 356 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
G ++ GQLG ++ + +P+ + + V+CG
Sbjct: 219 -GKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCG 254
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 277 HARRPSLISGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESP---VDQVSCGWKH 332
H L + G++Y G+N++ LG H P + P E V Q++CG +H
Sbjct: 45 HRHTLFLTANGQVYACGNNDHHQLG-------HELPTKRPLPIPELQAYVVIQIACGSRH 97
Query: 333 TAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNFGENVKALQVS 390
+ A++E G+IL+WG + GQ+GH D D I P I+ F + +Q++
Sbjct: 98 SMALTEWGQILSWG------------DNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIA 145
Query: 391 CGFNHTGAL 399
CG NH+ AL
Sbjct: 146 CGNNHSLAL 154
>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
Length = 527
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ + P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 99 WGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++G K VV I+ G S A+ GE+++WG N NGQLGLG
Sbjct: 159 QVGSGSTANQPI-PRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGS 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 218 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 269
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y ++ E + + ++IAA H SA + G VY++G
Sbjct: 270 --KSNQSYPTPVVVEKDRI-IEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 115/220 (52%), Gaps = 18/220 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-S 106
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGLGDVQSTIEPRRLDSLTGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT 111
Query: 107 ENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV 164
N G L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 112 TNAG--LVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ- 168
Query: 165 IPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 169 -PIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGS---------S 218
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++ TP + L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 219 GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 139/318 (43%), Gaps = 56/318 (17%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVD 141
L+ T ++ G N G LG+ + + ++EP R+ L K++ +S G H T +
Sbjct: 35 LYTTVNDEIFVLGTNCCGCLGLGD-VQSTIEPRRLDSLTGKKIACLSYGSGPHIVLATTE 93
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
GE++ WG N+ QLG G A ++P LS + A G S+ +T G+V +W
Sbjct: 94 GEVFTWGHNAYSQLGNGTTNAGLVPYHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAW 152
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G SG++G G + ++ PR + + C+ V I
Sbjct: 153 GYNNSGQVGSGS---------TANQPIPRRV-----------------TGCLQNKVVVNI 186
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
A +M ++++ GE++ WG N NG LG+GS +P RV
Sbjct: 187 ----ACGQMC--------SMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRV-AALQGI 233
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
V +V+CG+ HT ++ EG++ W G +S GQLG GN + +PT V
Sbjct: 234 RVQRVACGYAHTLVLTDEGQVYAW------------GANSYGQLGTGNKSNQSYPTPVVV 281
Query: 381 GENVKALQVSCGFNHTGA 398
++ +C HT A
Sbjct: 282 EKDRIIEIAACHSAHTSA 299
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 114/268 (42%), Gaps = 60/268 (22%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ L+G K A L + V T
Sbjct: 38 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLTG--KKIACLSYGSGPHIVLATTE 93
Query: 196 GKVLSWGAGGSGRLGHGQESS-ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G+V +WG +LG+G ++ ++ + ST+ ++I+ A G HS
Sbjct: 94 GEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIE---------VACGSYHSLV-- 142
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
L S GE++ WG N +G +G GS P RV
Sbjct: 143 ----------------------------LTSDGEVFAWGYNNSGQVGSGSTANQPIPRRV 174
Query: 315 QGPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
G V ++CG + A ++ G++ WG+ G+ GQLG G+ +
Sbjct: 175 TGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGN------------GQLGLGSSGNQP 222
Query: 374 HPTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 223 TPCRVAALQGIRVQRVACGYAHTLVLTD 250
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
QLG S P + K +++I+ + H S+A T G +YMWG+
Sbjct: 264 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ 312
>gi|326914182|ref|XP_003203406.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Meleagris
gallopavo]
Length = 537
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 134/300 (44%), Gaps = 47/300 (15%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A + +L+ G G H L TE G VYA G N + QLG + N
Sbjct: 60 LGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATN 119
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+V++++ G HHS A++ DG+LY WG N+ GQ+G G A + P P
Sbjct: 120 QGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQ--PTP 177
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
+V CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 178 RRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQL--------- 228
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
TP + L GV + A G+ H+ +L G
Sbjct: 229 TPCRVAALHGVCILQIACGYAHTL------------------------------ALTDEG 258
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTWG 345
LY WG+N G LG G+ SP ++ E V+ +C HT+A G++ WG
Sbjct: 259 LLYAWGANTYGQLGTGNKSNQLSPLQIMME-KERVVEIAACHSAHTSAAKTQSGQVYMWG 317
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 121/225 (53%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L+ G +YA G N+ G
Sbjct: 105 WGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCG 164
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P R+S K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 165 QVG-SGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGN 223
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +V L G+ Q A G+ ++A+T G + +WGA G+LG G +S+ L
Sbjct: 224 NGNQL--TPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLS 281
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
L +++ E E V V+IAA H SA ++G+VY++G
Sbjct: 282 PL--------QIMMEKERV-VEIAACHSAHTSAAKTQSGQVYMWG 317
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P +A + +ACG AHTL LT+ G +YA G N +GQ
Sbjct: 211 WGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQ 270
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L PL+I K+ VV+I+ + H S+A T G++YMWG+ GQ
Sbjct: 271 LG-TGNKSNQLSPLQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ------ 322
Query: 161 AAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 323 -SVVLPHLTHFACTDDVF 339
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 124/294 (42%), Gaps = 61/294 (20%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + T + E++++G N + LG G + + +P K+E
Sbjct: 19 LSPQEIASIRKACV-FGTSANEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTI--VPKKLE 75
Query: 173 CLSGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
L G K ++L + + T G+V +WG G +LG+G + TP
Sbjct: 76 ALCG--KKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGA---------TNQGVTP 124
Query: 230 -RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGE 288
++ L KV A G HS +L G+
Sbjct: 125 VQVCTNLLLKKVIEVACGSHHSM------------------------------ALSFDGD 154
Query: 289 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWGWG 347
LY WG N G +G GS +P RV + V ++CG + A ++ G++ WG+
Sbjct: 155 LYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYN 214
Query: 348 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G+ GQLG GN+ + + P V V LQ++CG+ HT AL +
Sbjct: 215 GN------------GQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTD 256
>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
containing protein 2 [Oryctolagus cuniculus]
Length = 551
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 115/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++G K VV I+ G S A+ GE+Y+WG N NGQLGLG
Sbjct: 183 QVGSGPTANQPI-PRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS 241
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 242 GGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 293
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y ++ E + + ++IAA H SA + G VY++G
Sbjct: 294 --KSNQSYPTPVVVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 113/219 (51%), Gaps = 16/219 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG +S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDAQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P +IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGPTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G
Sbjct: 193 PIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------GG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++ TP + L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 141/349 (40%), Gaps = 64/349 (18%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + ++E
Sbjct: 30 KWPIFSLCSEEELQLIRQACVFGNAGNEVLYSTVNDEIFVLGTNCSGCLGLGDAQS-TIE 88
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 89 PRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTN 148
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 149 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGP---------TANQPIPRRV 198
Query: 233 KEL--EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
V V IA A +D GE+Y
Sbjct: 199 TGCLQNKVVVNIACGQMCSMAVVDT-------------------------------GEVY 227
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGS 349
WG N NG LG+GS +P RV V +V+CG+ HT ++ EG++ WG
Sbjct: 228 VWGYNGNGQLGLGSGGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWG---- 282
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 283 --------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSA 323
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSGGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 112/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N +G LGLG + + P +++ LSG K A L + V T
Sbjct: 62 TVNDEIFVLGTNCSGCLGLGDAQSTIEP--RRLDSLSG--KKIACLSYGSGPHVVLATTE 117
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L + ++ + + + E+ A G HS
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEV--------ACGSYHSLV--- 166
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G G P RV
Sbjct: 167 ---------------------------LTSDGEVFAWGYNNSGQVGSGPTANQPIPRRVT 199
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG + A+ + G++ WG+ G+ GQLG G+ +
Sbjct: 200 GCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGN------------GQLGLGSGGNQPT 247
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTD 274
>gi|348666178|gb|EGZ06006.1| hypothetical protein PHYSODRAFT_533148 [Phytophthora sojae]
Length = 429
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 168/393 (42%), Gaps = 72/393 (18%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLG----ISENIGYSLEPLRISGLK----KEV 125
++LA A + VY G GQLG + I + E L L+ K +
Sbjct: 26 RSLATRSALQHAFSTQSSVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKAI 85
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
+ G HS+AI DG+LY+WG N +LGLG +++++ +P +VE L G+ + G
Sbjct: 86 THVEFGASHSAAIDEDGKLYVWGSNEYSKLGLG-ESSEMETLPREVEALKGVKIVDVSCG 144
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL--EGVKVKIA 243
+ AV GK+ SWG GGS + + LG E TPRL+ L +GV +
Sbjct: 145 DYFTAAVDADGKMYSWGWGGSTM----KGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTV 200
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP---------------------- 281
G H+ + ++G ++ +G+ ++ E + P
Sbjct: 201 ECGEFHTVALSKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSF 260
Query: 282 SLISGGELYTWGSNENGCLGIG---SIDV--LHSPERVQGPFSESPVDQVSCGWKHTAAI 336
+L GELY+WG N LGIG ++DV + S + F+ V Q++ G+ H AA+
Sbjct: 261 ALTDNGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDHAAAV 320
Query: 337 S-EGKILTWG---WGGSHG--------------------TFSEDGH------SSGGQLGH 366
+ +G++ WG W H SE+G S LGH
Sbjct: 321 TDDGRLYMWGSKIWIEPHEMTAVNEYKMVQVACGRQYTVALSENGEVFTFGKGSSNCLGH 380
Query: 367 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G+ + + P + +V +SCG H GA+
Sbjct: 381 GDRKNQLQPVQIEALADVNITSISCGDYHMGAI 413
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 104/217 (47%), Gaps = 28/217 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNG+YGRLG G ++ P F K ++ ++A G + LT+ G +Y+ G N Q
Sbjct: 219 WGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDNGELYSWGGNSQNQ 278
Query: 103 LGISENIG---YSLE--PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
LGI + Y++E P+ + V QI+ GY H++A+T DG LYMWG
Sbjct: 279 LGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDHAAAVTDDGRLYMWG-------- 330
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+K+ P ++ ++ Q A G + +VA++ G+V ++G G S LGHG +
Sbjct: 331 -----SKIWIEPHEMTAVNEYKMVQVACGRQYTVALSENGEVFTFGKGSSNCLGHGDRKN 385
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
L P I+ L V + + G H I
Sbjct: 386 QL---------QPVQIEALADVNITSISCGDYHMGAI 413
>gi|310817521|ref|YP_003949879.1| regulator of chromosome condensation, rcc1 [Stigmatella aurantiaca
DW4/3-1]
gi|309390593|gb|ADO68052.1| Regulator of chromosome condensation, RCC1 [Stigmatella aurantiaca
DW4/3-1]
Length = 860
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 169/393 (43%), Gaps = 70/393 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--------AHTLFLTETGCVYA 94
WG+ YG+LG G+ R PV + ALA GG AH+L L G V+A
Sbjct: 218 WGDNGYGQLGDGTKAQRTTPVQVLGLA--GVTALAAGGNGTTVAISAHSLALRSDGTVWA 275
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG + P+++ GL V ++ G HS A+ DG ++ WG NS+GQ
Sbjct: 276 WGDNSAGQLGDGTTTERA-TPVQVLGL-TSVTALAAGAFHSLALRDDGTVWAWGNNSSGQ 333
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQA-----ALGF--EQSVAVTGGGKVLSWGAGGSG 207
LG G A+ P P +V L+ + A +LG + S+A+ G V +WG S
Sbjct: 334 LGDGTTTAR--PTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSR 391
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+ G G + + TP + EL G + AG LH+ + +G V+ +GD +
Sbjct: 392 QFGDGMPA---------TRTTPVQVSELTGGTALV--AGDLHAVVLKSDGTVWAWGDNSS 440
Query: 268 DKMLFQEGNHARRPSLISG--------------------GELYTWGSNENGCLGIGSIDV 307
++ +P +SG G ++ WG N G LGIG
Sbjct: 441 GQLGEGVTPVRAKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITAT 500
Query: 308 LHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGH 366
P + G S + ++ G H+ A+ G + TW G ++ GQLG
Sbjct: 501 REIPVQATGLAS---ISALAAGDSHSLALRGNGSVWTW------------GSNAYGQLGD 545
Query: 367 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G +D V ++ AL + G +H+ AL
Sbjct: 546 GTAIDRATAAQVPGLTDITAL--AAGNHHSLAL 576
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 136/296 (45%), Gaps = 39/296 (13%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ D+G+LG G++ SR PV S +++A+ G AH++ + G V+ G NDFG
Sbjct: 584 VWGSNDFGQLGDGTVTSRKTPVQVSGLS--AMRAVEAGPAHSVAVHLNGTVWVWGNNDFG 641
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG ++ P+++SGL V ++ G +HS A+ DG L+ WG N+ GQLG G
Sbjct: 642 QLGDGTVTSRAM-PVQVSGLTG-VTAVAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTSG 699
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P +V L+G+ A G S+A+ G V WGA G+LG G +
Sbjct: 700 --IQSTPAQVPGLTGVIALAA--GNGHSLALRTDGTVWGWGANSFGQLGDGTTTP----- 750
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
RST P L V AG ++ + V+ +G ++ ++ P
Sbjct: 751 RSTPTQVPGL------TNVIALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKTTP 804
Query: 282 SLISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
+SG ++ WG N+ G +G G+ ++ +P V P
Sbjct: 805 VQVSGLTDVTALAAGNAHALALRTDRTVWAWGGNQRGQIGDGTASIMPAPVNVSFP 860
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 163/378 (43%), Gaps = 57/378 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG+G +R PV + S+ ALA G +H+L L G V+ G N +GQ
Sbjct: 485 WGDNRRGQLGIGITATREIPVQATGLA--SISALAAGDSHSLALRGNGSVWTWGSNAYGQ 542
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I + ++ GL ++ ++ G HHS A+ DG +++WG N GQLG G +
Sbjct: 543 LGDGTAIDRATA-AQVPGL-TDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTS 600
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V LS + +A G SVAV G V WG G+LG G
Sbjct: 601 RKTPV--QVSGLSAMRAVEA--GPAHSVAVHLNGTVWVWGNNDFGQLGDGTV-------- 648
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
TS P + L GV A G HS + +G ++ +G V ++ P+
Sbjct: 649 -TSRAMPVQVSGLTGVTA--VAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTSGIQSTPA 705
Query: 283 LISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
+ G G ++ WG+N G LG G+ +P +V G +
Sbjct: 706 QVPGLTGVIALAAGNGHSLALRTDGTVWGWGANSFGQLGDGTTTPRSTPTQVPG---LTN 762
Query: 323 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
V ++ G +T A+ SE + W G S GQLG G P V+
Sbjct: 763 VIALNAGAFYTVALRSERSVWEW------------GSKSAGQLGDGTVTQKTTPVQVSGL 810
Query: 382 ENVKALQVSCGFNHTGAL 399
+V AL + G H AL
Sbjct: 811 TDVTAL--AAGNAHALAL 826
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 154/347 (44%), Gaps = 57/347 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G G +R PV S E AL G H + L G V+A G N GQ
Sbjct: 385 WGYNLSRQFGDGMPATRTTPVQVS--ELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQ 442
Query: 103 LGISENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG E + +P+++SGL + ++TG HS A+ DG ++ WG N GQLG+G A
Sbjct: 443 LG--EGVTPVRAKPMQVSGLAA-ITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITA 499
Query: 162 AKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ IP+ T + +S + A G S+A+ G G V +WG+ G+LG G
Sbjct: 500 TREIPVQATGLASISAL-----AAGDSHSLALRGNGSVWTWGSNAYGQLGDGTA-----I 549
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+T+ P L + AAG HS + +G V+++G ++ +
Sbjct: 550 DRATAAQVPGL------TDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTSRKT 603
Query: 281 PSLISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
P +SG G ++ WG+N+ G LG G++ P +V G
Sbjct: 604 PVQVSGLSAMRAVEAGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVTSRAMPVQVSG---L 660
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
+ V V+ G H+ A+ L W W G+++ GQLG+G
Sbjct: 661 TGVTAVAVGVYHSLALRNDGTL-WAW----------GYNNVGQLGNG 696
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 144/342 (42%), Gaps = 62/342 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV S+ A+A AH+L L G V+A G N +GQ
Sbjct: 168 WGFNGSGQLGNGTATDRATPVQVPGLT--SVMAVAASEAHSLALRSDGTVWAWGDNGYGQ 225
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYH--------HSSAITVDGELYMWGKNSNGQ 154
LG P+++ GL V ++ G + HS A+ DG ++ WG NS GQ
Sbjct: 226 LGDGTK-AQRTTPVQVLGLAG-VTALAAGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQ 283
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P V+ L A G S+A+ G V +WG SG+LG G
Sbjct: 284 LGDGTTTERATP----VQVLGLTSVTALAAGAFHSLALRDDGTVWAWGNNSSGQLGDGT- 338
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG--------FLHSACIDENGRVYIFGDRA 266
+T+ TP + L V + +AA G HS + +G V+ +G
Sbjct: 339 --------TTARPTPVQVPGLTSV-IAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNL 389
Query: 267 VDKMLFQEGNHARRPS----------------------LISGGELYTWGSNENGCLGIGS 304
+ F +G A R + L S G ++ WG N +G LG G
Sbjct: 390 SRQ--FGDGMPATRTTPVQVSELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQLGEGV 447
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 345
V P +V G + + ++ G H+ A+ S+G I WG
Sbjct: 448 TPVRAKPMQVSG---LAAITALATGDGHSVAVGSDGGIWAWG 486
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 166/429 (38%), Gaps = 100/429 (23%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV S+ ALA G H+L L + G V+A G N GQ
Sbjct: 276 WGDNSAGQLGDGTTTERATPVQVLGLT--SVTALAAGAFHSLALRDDGTVWAWGNNSSGQ 333
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTG---------YHHSSAITVDGELYMWGKNSNG 153
LG P+++ GL V+ ++ G HS A+ DG ++ WG N +
Sbjct: 334 LGDGTTTARP-TPVQVPGL-TSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSR 391
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG- 212
Q G G A + P+ +V L+G A G +V + G V +WG SG+LG G
Sbjct: 392 QFGDGMPATRTTPV--QVSELTGGTALVA--GDLHAVVLKSDGTVWAWGDNSSGQLGEGV 447
Query: 213 --------QESSI--------------------------------LGFLRSTSEYTPRLI 232
Q S + LG + + P
Sbjct: 448 TPVRAKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITATREIPVQA 507
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRA--------VDKML 271
L + AAG HS + NG V+ +G DRA D
Sbjct: 508 TGL--ASISALAAGDSHSLALRGNGSVWTWGSNAYGQLGDGTAIDRATAAQVPGLTDITA 565
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 331
GNH +L + G ++ WGSN+ G LG G++ +P +V G S + V G
Sbjct: 566 LAAGNH-HSLALRNDGTVWVWGSNDFGQLGDGTVTSRKTPVQVSG---LSAMRAVEAGPA 621
Query: 332 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 390
H+ A+ G + W G++ GQLG G P V+ V A V+
Sbjct: 622 HSVAVHLNGTVWVW------------GNNDFGQLGDGTVTSRAMPVQVSGLTGVTA--VA 667
Query: 391 CGFNHTGAL 399
G H+ AL
Sbjct: 668 VGVYHSLAL 676
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 107/218 (49%), Gaps = 25/218 (11%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH 133
A++ G HTL L G V+A G N GQLG + P+++ GL V+ ++
Sbjct: 147 PAVSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRA-TPVQVPGLTS-VMAVAASEA 204
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
HS A+ DG ++ WG N GQLG G KA + P+ +V L+G+ T AA G +VA++
Sbjct: 205 HSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTPV--QVLGLAGV-TALAAGGNGTTVAIS 261
Query: 194 G-------GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
G V +WG +G+LG G +T TP ++ L V AAG
Sbjct: 262 AHSLALRSDGTVWAWGDNSAGQLGDGT---------TTERATP--VQVLGLTSVTALAAG 310
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
HS + ++G V+ +G+ + ++ +G RP+ +
Sbjct: 311 AFHSLALRDDGTVWAWGNNSSGQL--GDGTTTARPTPV 346
>gi|115373190|ref|ZP_01460491.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115369791|gb|EAU68725.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 859
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 169/393 (43%), Gaps = 70/393 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--------AHTLFLTETGCVYA 94
WG+ YG+LG G+ R PV + ALA GG AH+L L G V+A
Sbjct: 217 WGDNGYGQLGDGTKAQRTTPVQVLGLA--GVTALAAGGNGTTVAISAHSLALRSDGTVWA 274
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG + P+++ GL V ++ G HS A+ DG ++ WG NS+GQ
Sbjct: 275 WGDNSAGQLGDGTTTERA-TPVQVLGL-TSVTALAAGAFHSLALRDDGTVWAWGNNSSGQ 332
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQA-----ALGF--EQSVAVTGGGKVLSWGAGGSG 207
LG G A+ P P +V L+ + A +LG + S+A+ G V +WG S
Sbjct: 333 LGDGTTTAR--PTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSR 390
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+ G G + + TP + EL G + AG LH+ + +G V+ +GD +
Sbjct: 391 QFGDGMPA---------TRTTPVQVSELTGGTALV--AGDLHAVVLKSDGTVWAWGDNSS 439
Query: 268 DKMLFQEGNHARRPSLISG--------------------GELYTWGSNENGCLGIGSIDV 307
++ +P +SG G ++ WG N G LGIG
Sbjct: 440 GQLGEGVTPVRAKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITAT 499
Query: 308 LHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGH 366
P + G S + ++ G H+ A+ G + TW G ++ GQLG
Sbjct: 500 REIPVQATGLAS---ISALAAGDSHSLALRGNGSVWTW------------GSNAYGQLGD 544
Query: 367 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G +D V ++ AL + G +H+ AL
Sbjct: 545 GTAIDRATAAQVPGLTDITAL--AAGNHHSLAL 575
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 136/296 (45%), Gaps = 39/296 (13%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ D+G+LG G++ SR PV S +++A+ G AH++ + G V+ G NDFG
Sbjct: 583 VWGSNDFGQLGDGTVTSRKTPVQVSGLS--AMRAVEAGPAHSVAVHLNGTVWVWGNNDFG 640
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG ++ P+++SGL V ++ G +HS A+ DG L+ WG N+ GQLG G
Sbjct: 641 QLGDGTVTSRAM-PVQVSGLTG-VTAVAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTSG 698
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P +V L+G+ A G S+A+ G V WGA G+LG G +
Sbjct: 699 --IQSTPAQVPGLTGVIALAA--GNGHSLALRTDGTVWGWGANSFGQLGDGTTTP----- 749
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
RST P L V AG ++ + V+ +G ++ ++ P
Sbjct: 750 RSTPTQVPGL------TNVIALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKTTP 803
Query: 282 SLISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
+SG ++ WG N+ G +G G+ ++ +P V P
Sbjct: 804 VQVSGLTDVTALAAGNAHALALRTDRTVWAWGGNQRGQIGDGTASIMPAPVNVSFP 859
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 163/378 (43%), Gaps = 57/378 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG+G +R PV + S+ ALA G +H+L L G V+ G N +GQ
Sbjct: 484 WGDNRRGQLGIGITATREIPVQATGLA--SISALAAGDSHSLALRGNGSVWTWGSNAYGQ 541
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I + ++ GL ++ ++ G HHS A+ DG +++WG N GQLG G +
Sbjct: 542 LGDGTAIDRATA-AQVPGL-TDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTS 599
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V LS + +A G SVAV G V WG G+LG G
Sbjct: 600 RKTPV--QVSGLSAMRAVEA--GPAHSVAVHLNGTVWVWGNNDFGQLGDGTV-------- 647
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
TS P + L GV A G HS + +G ++ +G V ++ P+
Sbjct: 648 -TSRAMPVQVSGLTGVTA--VAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTSGIQSTPA 704
Query: 283 LISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
+ G G ++ WG+N G LG G+ +P +V G +
Sbjct: 705 QVPGLTGVIALAAGNGHSLALRTDGTVWGWGANSFGQLGDGTTTPRSTPTQVPG---LTN 761
Query: 323 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
V ++ G +T A+ SE + W G S GQLG G P V+
Sbjct: 762 VIALNAGAFYTVALRSERSVWEW------------GSKSAGQLGDGTVTQKTTPVQVSGL 809
Query: 382 ENVKALQVSCGFNHTGAL 399
+V AL + G H AL
Sbjct: 810 TDVTAL--AAGNAHALAL 825
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 154/347 (44%), Gaps = 57/347 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G G +R PV S E AL G H + L G V+A G N GQ
Sbjct: 384 WGYNLSRQFGDGMPATRTTPVQVS--ELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQ 441
Query: 103 LGISENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG E + +P+++SGL + ++TG HS A+ DG ++ WG N GQLG+G A
Sbjct: 442 LG--EGVTPVRAKPMQVSGLAA-ITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITA 498
Query: 162 AKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ IP+ T + +S + A G S+A+ G G V +WG+ G+LG G
Sbjct: 499 TREIPVQATGLASISAL-----AAGDSHSLALRGNGSVWTWGSNAYGQLGDGTA-----I 548
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+T+ P L + AAG HS + +G V+++G ++ +
Sbjct: 549 DRATAAQVPGL------TDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTSRKT 602
Query: 281 PSLISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
P +SG G ++ WG+N+ G LG G++ P +V G
Sbjct: 603 PVQVSGLSAMRAVEAGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVTSRAMPVQVSG---L 659
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
+ V V+ G H+ A+ L W W G+++ GQLG+G
Sbjct: 660 TGVTAVAVGVYHSLALRNDGTL-WAW----------GYNNVGQLGNG 695
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 144/342 (42%), Gaps = 62/342 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV S+ A+A AH+L L G V+A G N +GQ
Sbjct: 167 WGFNGSGQLGNGTATDRATPVQVPGLT--SVMAVAASEAHSLALRSDGTVWAWGDNGYGQ 224
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYH--------HSSAITVDGELYMWGKNSNGQ 154
LG P+++ GL V ++ G + HS A+ DG ++ WG NS GQ
Sbjct: 225 LGDGTK-AQRTTPVQVLGLAG-VTALAAGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQ 282
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P V+ L A G S+A+ G V +WG SG+LG G
Sbjct: 283 LGDGTTTERATP----VQVLGLTSVTALAAGAFHSLALRDDGTVWAWGNNSSGQLGDGT- 337
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG--------FLHSACIDENGRVYIFGDRA 266
+T+ TP + L V + +AA G HS + +G V+ +G
Sbjct: 338 --------TTARPTPVQVPGLTSV-IAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNL 388
Query: 267 VDKMLFQEGNHARRPS----------------------LISGGELYTWGSNENGCLGIGS 304
+ F +G A R + L S G ++ WG N +G LG G
Sbjct: 389 SRQ--FGDGMPATRTTPVQVSELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQLGEGV 446
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 345
V P +V G + + ++ G H+ A+ S+G I WG
Sbjct: 447 TPVRAKPMQVSG---LAAITALATGDGHSVAVGSDGGIWAWG 485
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 166/429 (38%), Gaps = 100/429 (23%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV S+ ALA G H+L L + G V+A G N GQ
Sbjct: 275 WGDNSAGQLGDGTTTERATPVQVLGLT--SVTALAAGAFHSLALRDDGTVWAWGNNSSGQ 332
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTG---------YHHSSAITVDGELYMWGKNSNG 153
LG P+++ GL V+ ++ G HS A+ DG ++ WG N +
Sbjct: 333 LGDGTTTARP-TPVQVPGL-TSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSR 390
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG- 212
Q G G A + P+ +V L+G A G +V + G V +WG SG+LG G
Sbjct: 391 QFGDGMPATRTTPV--QVSELTGGTALVA--GDLHAVVLKSDGTVWAWGDNSSGQLGEGV 446
Query: 213 --------QESSI--------------------------------LGFLRSTSEYTPRLI 232
Q S + LG + + P
Sbjct: 447 TPVRAKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITATREIPVQA 506
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRA--------VDKML 271
L + AAG HS + NG V+ +G DRA D
Sbjct: 507 TGL--ASISALAAGDSHSLALRGNGSVWTWGSNAYGQLGDGTAIDRATAAQVPGLTDITA 564
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 331
GNH +L + G ++ WGSN+ G LG G++ +P +V G S + V G
Sbjct: 565 LAAGNH-HSLALRNDGTVWVWGSNDFGQLGDGTVTSRKTPVQVSG---LSAMRAVEAGPA 620
Query: 332 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 390
H+ A+ G + W G++ GQLG G P V+ V A V+
Sbjct: 621 HSVAVHLNGTVWVW------------GNNDFGQLGDGTVTSRAMPVQVSGLTGVTA--VA 666
Query: 391 CGFNHTGAL 399
G H+ AL
Sbjct: 667 VGVYHSLAL 675
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 107/218 (49%), Gaps = 25/218 (11%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH 133
A++ G HTL L G V+A G N GQLG + P+++ GL V+ ++
Sbjct: 146 PAVSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRA-TPVQVPGLTS-VMAVAASEA 203
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
HS A+ DG ++ WG N GQLG G KA + P+ +V L+G+ T AA G +VA++
Sbjct: 204 HSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTPV--QVLGLAGV-TALAAGGNGTTVAIS 260
Query: 194 G-------GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
G V +WG +G+LG G +T TP ++ L V AAG
Sbjct: 261 AHSLALRSDGTVWAWGDNSAGQLGDGT---------TTERATP--VQVLGLTSVTALAAG 309
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
HS + ++G V+ +G+ + ++ +G RP+ +
Sbjct: 310 AFHSLALRDDGTVWAWGNNSSGQL--GDGTTTARPTPV 345
>gi|386780927|ref|NP_001247543.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
gi|402902026|ref|XP_003913930.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Papio anubis]
gi|355754700|gb|EHH58601.1| Regulator of chromosome condensation and BTB domain-containing
protein 1 [Macaca fascicularis]
gi|383419643|gb|AFH33035.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
gi|383419645|gb|AFH33036.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
Length = 531
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 139/301 (46%), Gaps = 49/301 (16%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
TP V++AA LHS C+++ + G +A +L
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ----IVCG-------------YAHTLALTDE 251
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTW 344
G LY WG+N G LG G+ + L SP + E V+ +C HT+A G + W
Sbjct: 252 GLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMW 310
Query: 345 G 345
G
Sbjct: 311 G 311
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 138/312 (44%), Gaps = 51/312 (16%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + +T D E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSASEALYVTDDDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
LSG K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 GLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V A G HS + +G V+ +G ++ G+ A +P+
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV S V+Q+
Sbjct: 180 IKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG ++ GQLG GN + + P + +
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHIMVEKERVV 287
Query: 387 LQVSCGFNHTGA 398
+C HT A
Sbjct: 288 EIAACHSAHTSA 299
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
>gi|74140658|dbj|BAB30628.3| unnamed protein product [Mus musculus]
Length = 590
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 171/388 (44%), Gaps = 57/388 (14%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G + G+
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 239
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E +L RS P+ + + +++A G
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGG-- 290
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVL 308
G + ++ V Y +G + G LG+G+
Sbjct: 291 --------GHTVVLTEKVV----------------------YAFGLGQFGQLGLGTFLFE 320
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
S ++ + + +SCG HTA ++E G + T+G G HG LG
Sbjct: 321 TSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG-DGRHGKLG---------LGME 370
Query: 368 NDVDYIHPTIVNFGENVKALQVSCGFNH 395
N + PT+ + ++CG H
Sbjct: 371 NFTNQFFPTLCSNFLRFAVQLIACGGCH 398
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 156/340 (45%), Gaps = 57/340 (16%)
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
+ +TG V+ FG+ +ENI P + + +S G H++ +T + +L
Sbjct: 45 LVPDTGAVFT-----FGKTKFAENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKL 94
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
YM+G N+ GQLGLG KAA I PT ++ L K AA G ++ T G V + G
Sbjct: 95 YMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGN 152
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LG G F + IK+L +AG SA + E+G+++++GD
Sbjct: 153 NEGQLGLGDTDDRDTFHQIVFFTPADTIKQL--------SAGANTSAALTEDGKLFMWGD 204
Query: 265 RAVDKMLFQEGNHARRPSLIS--------------------GGELYTWGSNENGCLGIGS 304
+ ++ ++ ++ P ++ GELYT+G ENG LG+ +
Sbjct: 205 NSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPN 264
Query: 305 IDVLH--SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
+++ SP+RV G V QV+CG HT ++E + +G G G
Sbjct: 265 ELLMNHRSPQRVLG--IPERVIQVACGGGHTVVLTEKVVYAFGLG------------QFG 310
Query: 363 QLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QLG G + + P I+ ++ K +SCG NHT + E
Sbjct: 311 QLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 350
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 51/245 (20%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E + VTG K+ +G+ G+LG G +++I+ P IK L+ KVK+AA
Sbjct: 81 GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAA 131
Query: 245 AGFLHSACIDENGRVYIFG-------------DRAV--DKMLFQEGNHARRPS------- 282
G H+ + G VY G DR + F + ++ S
Sbjct: 132 CGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSA 191
Query: 283 -LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 340
L G+L+ WG N G +G+ + P V P+ +SCG+ H+A ++ +G+
Sbjct: 192 ALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT---VGKPISWISCGYYHSAFVTMDGE 248
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHTGA 398
+ T+G G+LG N++ H P V G + +QV+CG HT
Sbjct: 249 LYTFG------------EPENGKLGLPNELLMNHRSPQRV-LGIPERVIQVACGGGHTVV 295
Query: 399 LLEYV 403
L E V
Sbjct: 296 LTEKV 300
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 402
>gi|295789061|ref|NP_001171424.1| X-linked retinitis pigmentosa GTPase regulator isoform 5 [Mus
musculus]
gi|26332729|dbj|BAC30082.1| unnamed protein product [Mus musculus]
Length = 557
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 171/388 (44%), Gaps = 57/388 (14%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G + G+
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 239
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E +L RS P+ + + +++A G
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGG-- 290
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVL 308
G + ++ V Y +G + G LG+G+
Sbjct: 291 --------GHTVVLTEKVV----------------------YAFGLGQFGQLGLGTFLFE 320
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
S ++ + + +SCG HTA ++E G + T+G G HG LG
Sbjct: 321 TSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG-DGRHGKLG---------LGME 370
Query: 368 NDVDYIHPTIVNFGENVKALQVSCGFNH 395
N + PT+ + ++CG H
Sbjct: 371 NFTNQFFPTLCSNFLRFAVQLIACGGCH 398
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 156/340 (45%), Gaps = 57/340 (16%)
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
+ +TG V+ FG+ +ENI P + + +S G H++ +T + +L
Sbjct: 45 LVPDTGAVFT-----FGKTKFAENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKL 94
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
YM+G N+ GQLGLG KAA I PT ++ L K AA G ++ T G V + G
Sbjct: 95 YMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGN 152
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LG G F + IK+L +AG SA + E+G+++++GD
Sbjct: 153 NEGQLGLGDTDDRDTFHQIVFFTPADTIKQL--------SAGANTSAALTEDGKLFMWGD 204
Query: 265 RAVDKMLFQEGNHARRPSLIS--------------------GGELYTWGSNENGCLGIGS 304
+ ++ ++ ++ P ++ GELYT+G ENG LG+ +
Sbjct: 205 NSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPN 264
Query: 305 IDVLH--SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
+++ SP+RV G V QV+CG HT ++E + +G G G
Sbjct: 265 ELLMNHRSPQRVLG--IPERVIQVACGGGHTVVLTEKVVYAFGLG------------QFG 310
Query: 363 QLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QLG G + + P I+ ++ K +SCG NHT + E
Sbjct: 311 QLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 350
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 51/245 (20%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E + VTG K+ +G+ G+LG G +++I+ P IK L+ KVK+AA
Sbjct: 81 GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAA 131
Query: 245 AGFLHSACIDENGRVYIFG-------------DRAV--DKMLFQEGNHARRPS------- 282
G H+ + G VY G DR + F + ++ S
Sbjct: 132 CGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSA 191
Query: 283 -LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 340
L G+L+ WG N G +G+ + P V P+ +SCG+ H+A ++ +G+
Sbjct: 192 ALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT---VGKPISWISCGYYHSAFVTMDGE 248
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHTGA 398
+ T+G G+LG N++ H P V G + +QV+CG HT
Sbjct: 249 LYTFG------------EPENGKLGLPNELLMNHRSPQRV-LGIPERVIQVACGGGHTVV 295
Query: 399 LLEYV 403
L E V
Sbjct: 296 LTEKV 300
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTL 84
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHML 400
>gi|410906431|ref|XP_003966695.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Takifugu rubripes]
Length = 726
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 158/341 (46%), Gaps = 61/341 (17%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGEL 144
+ ETG V+ FG+ ++NI LK +V ++I+ G H++ IT +G L
Sbjct: 9 IPETGAVFT-----FGKSKFADNIPSKF------WLKNDVPLKIACGDEHTALITKNGRL 57
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+M+G N+ GQLGLG K + + PT V+ L A G ++ T GKV S G
Sbjct: 58 FMFGSNNWGQLGLGSK--RTVNKPTCVKALKTEKVLLVACGRNHTLICTAQGKVFSSGGN 115
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFG 263
G+LG G F R I + + VK+ AAG SA + E+G+++++G
Sbjct: 116 SEGQLGLGDCEERTTFQR---------IHAFDSLGPVKMLAAGSNTSAALTESGKLFMWG 166
Query: 264 DRAVDKMLFQEGNHARRPS--------------------LISGGELYTWGSNENGCLGIG 303
D ++ + +HA P + + G LYT+G ++G LG+
Sbjct: 167 DNTEGQIGLAKESHAPSPQEVDVGGPISWVSCGYYHSAFVTADGALYTFGECDSGKLGLT 226
Query: 304 SIDVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSG 361
+ + P+ V+ + PV QV+CG HT A++E ++ T+G G
Sbjct: 227 TEQLPRHRVPQMVKS--IKEPVTQVACGGGHTVALTEERLFTFGLG------------QF 272
Query: 362 GQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GQLGHG + + P V + + QV+CG NHT + +
Sbjct: 273 GQLGHGTFIFESRLPRPVEHFKKGRVCQVACGENHTAVITD 313
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 162/373 (43%), Gaps = 63/373 (16%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++LK D+ L G + + R F ++G+ ++G+LGLGS + +P A +
Sbjct: 29 SKFWLKNDVPLKIACGDEHTALITKNGRLF--MFGSNNWGQLGLGSKRTVNKPTCVKALK 86
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI---SENIGYSLEPLRISGLKK--E 124
+ +ACG HTL T G V+++G N GQLG+ E + RI
Sbjct: 87 TEKVLLVACGRNHTLICTAQGKVFSSGGNSEGQLGLGDCEERTTFQ----RIHAFDSLGP 142
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V ++ G + S+A+T G+L+MWG N+ GQ+GL K++ P P +V+ I +
Sbjct: 143 VKMLAAGSNTSAALTESGKLFMWGDNTEGQIGLAKESH--APSPQEVDVGGPI--SWVSC 198
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G+ S VT G + ++G SG+LG E + P+++K ++ ++A
Sbjct: 199 GYYHSAFVTADGALYTFGECDSGKLGLTTE-------QLPRHRVPQMVKSIKEPVTQVAC 251
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGS 304
G H+ + E L+T+G + G LG G+
Sbjct: 252 GGG-HTVALTEE-------------------------------RLFTFGLGQFGQLGHGT 279
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL 364
R F + V QV+CG HTA I++G +L G HG L
Sbjct: 280 FIFESRLPRPVEHFKKGRVCQVACGENHTAVITDGGLLYTFGDGRHGKLG---------L 330
Query: 365 GHGNDVDYIHPTI 377
G N + PT+
Sbjct: 331 GEENFTNQFKPTV 343
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + ++++P VCS F K+ ++A CGG H + L
Sbjct: 320 FGDGRHGKLGLGEENFTNQFKPTVCSRFLKYGVQAATCGGCHMVVL 365
>gi|405345706|ref|ZP_11022499.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
gi|397093755|gb|EJJ24452.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
436)]
Length = 747
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 173/380 (45%), Gaps = 63/380 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G+ R PV + + ++ ++ G H L L G +A G N FGQ
Sbjct: 224 WGDNRYGQLGDGTTVRRAAPVRVANLD--AVTHISAGAYHALALRADGTAWAWGYNAFGQ 281
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + +L P+ I GL E + G +HS A+ DG ++ WG N QLG G +
Sbjct: 282 LGDGTTVQRTL-PVLI-GLT-ETRTVVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTS 338
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+P+ ++G T A GF SVA+ G SWG G+LG
Sbjct: 339 SAVPLH---AGMTGGVTLVA--GFRHSVALGADGTAWSWGDNVFGQLGD----------- 382
Query: 223 STSEYTPRLIK-ELEGVKVKIAAA--GFLHSACIDENGRVYIFGDRAVDKML--FQEGNH 277
+ + PR+ ++ G+ + A A G LH+ + NGR++ +GD ++ Q+ +
Sbjct: 383 --TTFQPRMAPVQVTGLALGRADATSGQLHTVMLGANGRLWAWGDNNQGQLGNGTQQNSS 440
Query: 278 ARRPSLISG-----------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
P ++G G +++WG+N+ G LG G+ +P +V G
Sbjct: 441 LPLPVNLTGITSVSSGHRHTAALRLDGTVWSWGTNQYGQLGDGTRTDRSTPVQVPG---L 497
Query: 321 SPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
+ V ++ G H+ A+ S G + WGWG + GQLG G VD P V+
Sbjct: 498 TGVTSIATGDYHSLALRSNGTV--WGWG----------FNRYGQLGDGTTVDRTQPVQVS 545
Query: 380 FGENVKALQVSCGFNHTGAL 399
N+ + ++ G H+ AL
Sbjct: 546 GLTNI--VSIAAGGGHSLAL 563
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 147/365 (40%), Gaps = 59/365 (16%)
Query: 37 RRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
R +W GD LGS PV + A+ GG+ +L L G V+A G
Sbjct: 166 RADGTVWAWGDNRSNQLGSATLTRSPVPIPVPGLSDIVAVVAGGSSSLALRADGTVWAWG 225
Query: 97 LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
N +GQLG + P+R++ L V IS G +H+ A+ DG + WG N+ GQLG
Sbjct: 226 DNRYGQLGDGTTV-RRAAPVRVANLDA-VTHISAGAYHALALRADGTAWAWGYNAFGQLG 283
Query: 157 LGKKAAKVIPIPTKVECLSGIF-TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G + +P+ L G+ T+ G S+AV G V +WG +LG G
Sbjct: 284 DGTTVQRTLPV------LIGLTETRTVVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNL- 336
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LF 272
TS P GV + AGF HS + +G + +GD ++ F
Sbjct: 337 --------TSSAVPLHAGMTGGVTL---VAGFRHSVALGADGTAWSWGDNVFGQLGDTTF 385
Query: 273 QE--------GNHARRPSLISG----------GELYTWGSNENGCLGIGSIDVLHSPERV 314
Q G R SG G L+ WG N G LG G+ P
Sbjct: 386 QPRMAPVQVTGLALGRADATSGQLHTVMLGANGRLWAWGDNNQGQLGNGTQQNSSLPL-- 443
Query: 315 QGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
P + + + VS G +HTAA+ +G + +W G + GQLG G D
Sbjct: 444 --PVNLTGITSVSSGHRHTAALRLDGTVWSW------------GTNQYGQLGDGTRTDRS 489
Query: 374 HPTIV 378
P V
Sbjct: 490 TPVQV 494
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 122/274 (44%), Gaps = 49/274 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G+ R +PV S + ++A GG H+L L G V+A G N GQ
Sbjct: 522 WGFNRYGQLGDGTTVDRTQPVQVSGLTN--IVSIAAGGGHSLALRSDGTVWAFGYNFDGQ 579
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG +++ P++ GL VV ++ G +S A+ DG ++ WG N++GQLG+G
Sbjct: 580 LGNGTRT-WTILPVQAVGLGN-VVSLAAGKMYSLALRADGTVWAWGYNASGQLGVGTTQG 637
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+P+ +V LS I + A G S+A+ G V +WG G+LG+G
Sbjct: 638 SAVPL--QVSGLSAITSITA--GTYHSLALRSDGWVWAWGFNFEGQLGNGT--------- 684
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
S + TP L+ + A G LHS + +G
Sbjct: 685 SDNRLTPGLVVSMSNATAIFA--GDLHSLAVRADG------------------------- 717
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
L+ WG N +G LG G P +VQG
Sbjct: 718 -----TLWAWGLNSHGQLGTGDTVEAWFPVQVQG 746
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 163/396 (41%), Gaps = 83/396 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G+LG + + R PV + A G HT+ L G ++A G N+ GQ
Sbjct: 372 WGDNVFGQLGDTTFQPRMAPVQVTGLALGRADA-TSGQLHTVMLGANGRLWAWGDNNQGQ 430
Query: 103 LGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG SL P+ ++G + +S+G+ H++A+ +DG ++ WG N GQLG G +
Sbjct: 431 LGNGTQQNSSLPLPVNLTG----ITSVSSGHRHTAALRLDGTVWSWGTNQYGQLGDGTRT 486
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ +V L+G+ A G S+A+ G V WG G+LG G
Sbjct: 487 DRSTPV--QVPGLTGV--TSIATGDYHSLALRSNGTVWGWGFNRYGQLGDGT-------- 534
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG----------DRAVDKML 271
+ P + L + V IAA G HS + +G V+ FG R +
Sbjct: 535 -TVDRTQPVQVSGLTNI-VSIAAGGG-HSLALRSDGTVWAFGYNFDGQLGNGTRTWTILP 591
Query: 272 FQEGNHARRPSLISG----------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
Q SL +G G ++ WG N +G LG+G+ P +V G S
Sbjct: 592 VQAVGLGNVVSLAAGKMYSLALRADGTVWAWGYNASGQLGVGTTQGSAVPLQVSG---LS 648
Query: 322 PVDQVSCGWKHTAAI-SEGKILTWGWG-----------------------GSHGTFSEDG 357
+ ++ G H+ A+ S+G + WG+ + F+ D
Sbjct: 649 AITSITAGTYHSLALRSDGWVWAWGFNFEGQLGNGTSDNRLTPGLVVSMSNATAIFAGDL 708
Query: 358 HS---------------SGGQLGHGNDVDYIHPTIV 378
HS S GQLG G+ V+ P V
Sbjct: 709 HSLAVRADGTLWAWGLNSHGQLGTGDTVEAWFPVQV 744
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 166/415 (40%), Gaps = 83/415 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ + + PV + S ++A G ++L L E G V+A G N GQ
Sbjct: 74 WGFNRLGQLGDGTTQDKAAPVQVAGVA--SAVSVAAGDQYSLALDENGDVWAWGDNASGQ 131
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + +P R+SGL + V +++G+ H+ A+ DG ++ WG N + QLG
Sbjct: 132 LG-DGTLTPRAQPRRVSGLTQGV-SLASGFAHAVALRADGTVWAWGDNRSNQLGSATLTR 189
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+PIP V LS I A G S+A+ G V +WG G+LG G +R
Sbjct: 190 SPVPIP--VPGLSDIVAVVA--GGSSSLALRADGTVWAWGDNRYGQLGDGTTVRRAAPVR 245
Query: 223 ----------STSEY---------------------------TPRLIKELEGV-KVKIAA 244
S Y R + L G+ + +
Sbjct: 246 VANLDAVTHISAGAYHALALRADGTAWAWGYNAFGQLGDGTTVQRTLPVLIGLTETRTVV 305
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP---------SLISG--------- 286
AG HS + +G V+ +GD ++ + P +L++G
Sbjct: 306 AGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTSSAVPLHAGMTGGVTLVAGFRHSVALGA 365
Query: 287 -GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTW 344
G ++WG N G LG + +P +V G + D S G HT + + G++ W
Sbjct: 366 DGTAWSWGDNVFGQLGDTTFQPRMAPVQVTG-LALGRADATS-GQLHTVMLGANGRLWAW 423
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G ++ GQLG+G + P VN VS G HT AL
Sbjct: 424 ------------GDNNQGQLGNGTQQNSSLPLPVNL---TGITSVSSGHRHTAAL 463
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 133/333 (39%), Gaps = 64/333 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ Y +LG G+L S P+ +L A G H++ L G ++ G N FGQ
Sbjct: 323 WGDNRYRQLGTGNLTSSAVPLHAGMTGGVTLVA---GFRHSVALGADGTAWSWGDNVFGQ 379
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P++++GL ++G H+ + +G L+ WG N+ GQLG G +
Sbjct: 380 LG-DTTFQPRMAPVQVTGLALGRADATSGQLHTVMLGANGRLWAWGDNNQGQLGNGTQQN 438
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+P+P + ++ + + G + A+ G V SWG G+LG G
Sbjct: 439 SSLPLPVNLTGITSVSS-----GHRHTAALRLDGTVWSWGTNQYGQLGDGTR-------- 485
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T TP + L GV A G HS + NG V
Sbjct: 486 -TDRSTPVQVPGLTGVTS--IATGDYHSLALRSNGTV----------------------- 519
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKIL 342
+ WG N G LG G+ P +V G + + ++ G H+ A+
Sbjct: 520 -------WGWGFNRYGQLGDGTTVDRTQPVQVSG---LTNIVSIAAGGGHSLALR----- 564
Query: 343 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
S GT G++ GQLG+G I P
Sbjct: 565 ------SDGTVWAFGYNFDGQLGNGTRTWTILP 591
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 132/329 (40%), Gaps = 66/329 (20%)
Query: 78 CGGAHTLFLTETGC-VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSS 136
GG L T C V A D + + G L P+R++ G +HS
Sbjct: 14 LGGLLALVSVTTACGVDAVQERDSATETVRQRAGARLPPVRLA----------VGQYHSL 63
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGG 195
A+ +G ++ WG N GQLG G K P+ ++G+ + A G + S+A+
Sbjct: 64 AVHSEGTVFAWGFNRLGQLGDGTTQDKAAPVQ-----VAGVASAVSVAAGDQYSLALDEN 118
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACID 254
G V +WG SG+LG G T PR + L +GV + A+GF H+ +
Sbjct: 119 GDVWAWGDNASGQLGDGTL---------TPRAQPRRVSGLTQGVSL---ASGFAHAVALR 166
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISG--------------------GELYTWGS 294
+G V+ +GD +++ + P + G G ++ WG
Sbjct: 167 ADGTVWAWGDNRSNQLGSATLTRSPVPIPVPGLSDIVAVVAGGSSSLALRADGTVWAWGD 226
Query: 295 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTF 353
N G LG G+ +P RV + V +S G H A+ ++G W
Sbjct: 227 NRYGQLGDGTTVRRAAPVRVA---NLDAVTHISAGAYHALALRADGTAWAW--------- 274
Query: 354 SEDGHSSGGQLGHGNDVDYIHPTIVNFGE 382
G+++ GQLG G V P ++ E
Sbjct: 275 ---GYNAFGQLGDGTTVQRTLPVLIGLTE 300
>gi|313221390|emb|CBY32143.1| unnamed protein product [Oikopleura dioica]
Length = 560
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 148/320 (46%), Gaps = 50/320 (15%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA--HTLFLTETGCVYATGLNDFG 101
G G YGRLG G+ S P++ F K L G+ H++ + + G ++ G D+G
Sbjct: 186 GKGSYGRLGNGASASSSSPILIE-FPAPVRKILTSKGSDGHSMAIGKNGQIWTWGDGDYG 244
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG ++ L + + +V G+ HS+A+ G LYMWG+ G+LGLG
Sbjct: 245 KLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDAL 304
Query: 162 AKVIPI--PTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSIL 218
+ +P+ P E Q GF +V ++ G+ V S+GA +G+LGHG
Sbjct: 305 QRSVPVQVPDIREA------SQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGD----- 353
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--------------- 263
+ ++ P++I L+G+ + AAG SA + G +Y++G
Sbjct: 354 ----TNRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPCLGNGSSDETFM 409
Query: 264 ---------DRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGS-IDVLHSPER 313
R V + E NH +L G ++TWG+N+NG G GS + SP+
Sbjct: 410 LPKVVRGLSGRVVIDIAIGE-NHVV--ALTKDGLVFTWGNNQNGQCGTGSGMATYTSPQM 466
Query: 314 VQGPFSESPVDQVSCGWKHT 333
VQG + + QV+ G HT
Sbjct: 467 VQG-LHGAGIQQVTAGTTHT 485
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 16/211 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDF 100
+WG GDYGRLGLG R PV + S + CG HT+ L+ G V++ G +
Sbjct: 289 MWGEGDYGRLGLGDALQRSVPVQVPDIREAS--QVVCGFNHTVVLSTDGRTVWSFGAAEN 346
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + P I L+ + QI+ G S+A+T +G LY+WG LG G
Sbjct: 347 GKLGHGDT-NRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPC--LGNG- 402
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + +P V LSG A+G VA+T G V +WG +G+ G G G
Sbjct: 403 SSDETFMLPKVVRGLSGRVVIDIAIGENHVVALTKDGLVFTWGNNQNGQCGTGS-----G 457
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
TS P++++ L G ++ AG H+
Sbjct: 458 MATYTS---PQMVQGLHGAGIQQVTAGTTHT 485
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 127/309 (41%), Gaps = 56/309 (18%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ G N QL + L P +S K V+ I+ G + + A+ +G + GK S
Sbjct: 131 VFCWGSNSSQQLTDATPEDKLLYPRNLSVYGK-VMSITAGQYCTFAVLSNGTVMANGKGS 189
Query: 152 NGQLGLGKKAAKVIPIPTKVEC-LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
G+LG G A+ PI + + I T + + G S+A+ G++ +WG G G+LG
Sbjct: 190 YGRLGNGASASSSSPILIEFPAPVRKILTSKGSDG--HSMAIGKNGQIWTWGDGDYGKLG 247
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
HG ST++ +P+LI+ L + A G HSA +
Sbjct: 248 HGD---------STTQKSPKLIEALASRVIVDADCGHRHSAAV----------------- 281
Query: 271 LFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 330
G LY WG + G LG+G D L VQ P QV CG+
Sbjct: 282 -------------CDAGHLYMWGEGDYGRLGLG--DALQRSVPVQVP-DIREASQVVCGF 325
Query: 331 KHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 390
HT +S W +G + G+LGHG+ P I++ + + Q++
Sbjct: 326 NHTVVLSTDGRTVWSFGAAE----------NGKLGHGDTNRQFRPKIIDALQGLTITQIA 375
Query: 391 CGFNHTGAL 399
G + A+
Sbjct: 376 AGTQISAAV 384
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 106/258 (41%), Gaps = 57/258 (22%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E++ WG NS+ QL K++ P + + + A G + AV G V++ G
Sbjct: 130 EVFCWGSNSSQQLTDATPEDKLL-YPRNLSVYGKVMSITA--GQYCTFAVLSNGTVMANG 186
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G GRLG+G S S +P LI+ V+
Sbjct: 187 KGSYGRLGNGA---------SASSSSPILIEFPAPVR----------------------- 214
Query: 263 GDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
K+L +G+ ++ G+++TWG + G LG G SP+ ++ S
Sbjct: 215 ------KILTSKGSDGHSMAIGKNGQIWTWGDGDYGKLGHGDSTTQKSPKLIEALASRVI 268
Query: 323 VDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
VD CG +H+AA+ + G + WG G G+LG G+ + P V
Sbjct: 269 VD-ADCGHRHSAAVCDAGHLYMWGEGDY------------GRLGLGDALQRSVP--VQVP 313
Query: 382 ENVKALQVSCGFNHTGAL 399
+ +A QV CGFNHT L
Sbjct: 314 DIREASQVVCGFNHTVVL 331
>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 153/368 (41%), Gaps = 70/368 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LG+G+ E + + A E + ++++ G ++L + + G ++ G N G
Sbjct: 10 WGSGEDGQLGIGNNEEKEWVCIVKALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQRGT 69
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
LG P ++ L +VQ + G H A+ G Y WG N GQ G
Sbjct: 70 LGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 129
Query: 157 ---LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
G+ + I IP + C S + +Q A G SV +T G V SWG
Sbjct: 130 KDDTGRPLRRDIVIPQR--CASKLVVRQVAAGGTHSVVLTREGHVWSWG----------- 176
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
+ G ++ S P ++ LE +V++ A G H+ + E+
Sbjct: 177 QPWPPGDIKQIS--VPVRVQGLE--RVRLIAVGAFHNLALQED----------------- 215
Query: 274 EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 333
G L+ WG+NE G LG G P VQG + VD + GW T
Sbjct: 216 -------------GTLWAWGNNEYGQLGTGDTQPRSQPITVQGLSGLTLVDIAAGGWHST 262
Query: 334 AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF--GENVKALQVSC 391
A +G++ WG G HG G + + P VN GE++ +QVSC
Sbjct: 263 ALTDDGEVYGWG-RGEHGRLG---------FGDNDKSSKMVPQRVNLLVGEDI--VQVSC 310
Query: 392 GFNHTGAL 399
G H+ AL
Sbjct: 311 GGTHSVAL 318
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 87/154 (56%), Gaps = 4/154 (2%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV E+ ++ +A G H L L E G ++A G N++GQLG + S +P+ + GL
Sbjct: 190 PVRVQGLER--VRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRS-QPITVQGL 246
Query: 122 KK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
+V I+ G HS+A+T DGE+Y WG+ +G+LG G +P +V L G
Sbjct: 247 SGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQRVNLLVGEDIV 306
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
Q + G SVA+T G++ ++G G GRLG+G++
Sbjct: 307 QVSCGGTHSVALTRDGRMYTFGRGDHGRLGYGRK 340
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG+LG G + R +P+ +L +A GG H+ LT+ G VY G + G+
Sbjct: 221 WGNNEYGQLGTGDTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGR 280
Query: 103 LGISENIGYS-LEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG +N S + P R++ L +++VQ+S G HS A+T DG +Y +G+ +G+LG G+K
Sbjct: 281 LGFGDNDKSSKMVPQRVNLLVGEDIVQVSCGGTHSVALTRDGRMYTFGRGDHGRLGYGRK 340
Query: 161 AAKVIPIPTKVE 172
P+ ++
Sbjct: 341 VTTGQPMEVPID 352
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 110/296 (37%), Gaps = 62/296 (20%)
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+ + + WG +GQLG+G K V+ L + G S+A+ GK
Sbjct: 1 MATESSVIAWGSGEDGQLGIGNNEEK--EWVCIVKALEPYKVRSVVAGSRNSLAICDDGK 58
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+ +WG G LGH E+ +E P +K L V + AA G H +D+ G
Sbjct: 59 LFTWGWNQRGTLGHPPETK--------TENIPSQVKALANVNIVQAAIGGWHCLAVDDQG 110
Query: 258 RVYIFG----------------------------DRAVDKMLFQE----GNHARRPSLIS 285
R Y +G R K++ ++ G H+ L
Sbjct: 111 RAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTHSV--VLTR 168
Query: 286 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 345
G +++WG G I + P RVQG V ++ G H A+ E L W
Sbjct: 169 EGHVWSWGQP----WPPGDIKQISVPVRVQG---LERVRLIAVGAFHNLALQEDGTL-WA 220
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
W G++ GQLG G+ P V + + ++ G H+ AL +
Sbjct: 221 W----------GNNEYGQLGTGDTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTD 266
>gi|118084892|ref|XP_417063.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Gallus gallus]
Length = 537
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 134/300 (44%), Gaps = 47/300 (15%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A + +L+ G G H L TE G VYA G N + QLG + N
Sbjct: 60 LGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATN 119
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+V++++ G HHS A++ DG+LY WG N+ GQ+G G A + P P
Sbjct: 120 QGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQ--PTP 177
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
+V CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 178 RRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQL--------- 228
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
TP + L GV + A G+ H+ +L G
Sbjct: 229 TPCRVAALHGVCILQIACGYAHTL------------------------------ALTDEG 258
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTWG 345
LY WG+N G LG G+ SP ++ E V+ +C HT+A G++ WG
Sbjct: 259 LLYAWGANTYGQLGTGNKSNQLSPLQIMME-KERVVEIAACHSAHTSAAKTQSGQVYMWG 317
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 121/225 (53%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L+ G +YA G N+ G
Sbjct: 105 WGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCG 164
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P R+S K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 165 QVG-SGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGN 223
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +V L G+ Q A G+ ++A+T G + +WGA G+LG G +S+ L
Sbjct: 224 NGNQL--TPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLS 281
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
L +++ E E V V+IAA H SA ++G+VY++G
Sbjct: 282 PL--------QIMMEKERV-VEIAACHSAHTSAAKTQSGQVYMWG 317
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P +A + +ACG AHTL LT+ G +YA G N +GQ
Sbjct: 211 WGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQ 270
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L PL+I K+ VV+I+ + H S+A T G++YMWG+ GQ
Sbjct: 271 LG-TGNKSNQLSPLQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ------ 322
Query: 161 AAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 323 -SVVLPHLTHFACTDDVF 339
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 124/294 (42%), Gaps = 61/294 (20%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + T + E++++G N + LG G + + +P K+E
Sbjct: 19 LSPQEIASIRKACV-FGTSANEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTI--VPKKLE 75
Query: 173 CLSGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
L G K ++L + + T G+V +WG G +LG+G + TP
Sbjct: 76 ALCG--KKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGA---------TNQGVTP 124
Query: 230 -RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGE 288
++ L KV A G HS +L G+
Sbjct: 125 VQVCTNLLLKKVIEVACGSHHSM------------------------------ALSFDGD 154
Query: 289 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWGWG 347
LY WG N G +G GS +P RV + V ++CG + A ++ G++ WG+
Sbjct: 155 LYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYN 214
Query: 348 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G+ GQLG GN+ + + P V V LQ++CG+ HT AL +
Sbjct: 215 GN------------GQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTD 256
>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
Length = 4502
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 165/351 (47%), Gaps = 58/351 (16%)
Query: 79 GGAHTLFL-TETGCVYATGLNDFGQLGI--SENIGYSLEPLRISGLKKEVVQ---ISTGY 132
GG+ +LFL T++G YA G G+LG+ S N+ P +I+ L + VV+ + +G
Sbjct: 2738 GGSKSLFLVTQSGKAYACGEGSNGRLGLGHSRNVN---SPHQITALSQHVVRKVAVHSGG 2794
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
H+ A+T DG ++ WG+ +G+LG G + + P +E L+G + A G S AV
Sbjct: 2795 RHALALTADGRVFSWGEGDDGKLGHGDVTS--LDTPRCIEALNGFRVRDVAAGSNHSAAV 2852
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHS 250
T G++ +WG G GRLGHG + ++ TP+ ++ L G +V + G +
Sbjct: 2853 TSSGELYTWGLGEYGRLGHGD---------NLTQLTPKRVESLVGQRVVQVSCGSRDAQT 2903
Query: 251 ACIDENGRVYIFGD-----------------RAVDKM-----LFQEGNHARRPSLISGGE 288
+ E G VY +GD VDK+ E +L G
Sbjct: 2904 LALVEGGLVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGVCHVECGAQFSVALTCNGH 2963
Query: 289 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 347
+YTWG + LG GS + P V+G V VS G H A+++ G++ WG
Sbjct: 2964 VYTWGKGDYFRLGHGSDQHVRWPTLVEG-LRGKKVIGVSVGALHCLAVTDAGQVFAWG-- 3020
Query: 348 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G+ PT+V + +K +V+CG +H+ A
Sbjct: 3021 -------DNDH---GQQGNGSITVNRRPTLVQGIDGIKITRVACGSSHSVA 3061
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 137/304 (45%), Gaps = 50/304 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ RP + + + +ACGGAH+ +T G +Y G +G+
Sbjct: 3725 WGEGEDGKLGHGNKLPCDRPRIIESLRGKDVVDVACGGAHSAAITALGELYTWGKGRYGR 3784
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVD--GELYMWGKNSNGQLGL 157
LG ++ L+P + L + V +G + AIT + G ++ WG G+LG
Sbjct: 3785 LGHGDS-DDQLKPKLVEALLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGR 3843
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + IPTK+E LSG+ + G + SVA++ G V +WG G RLGHG + +
Sbjct: 3844 G--GSDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSVYTWGKGDYHRLGHGVDEHV 3901
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA-CIDENGRVYIFGDRAVDKMLFQEGN 276
P+ + L+G KV + G LH C D+
Sbjct: 3902 ---------RRPKKVMTLQGKKVISISTGALHCVVCTDQ--------------------- 3931
Query: 277 HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 336
GE+YTWG N+ G LG G+ + P R+ +++VSCG HT A
Sbjct: 3932 ----------GEVYTWGDNDEGQLGDGTTTGIQKP-RLVAALQNKKINRVSCGSAHTVAW 3980
Query: 337 SEGK 340
S K
Sbjct: 3981 STCK 3984
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 133/296 (44%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G + S P A ++ +A G H+ +T +G +Y GL ++G+
Sbjct: 2809 WGEGDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYTWGLGEYGR 2868
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N+ L P R+ L + VVQ+S G + A+ G +Y WG G+LG G
Sbjct: 2869 LGHGDNLT-QLTPKRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLGRG- 2926
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P V+ LSG+ G + SVA+T G V +WG G RLGHG + +
Sbjct: 2927 -GSEGCSSPCLVDKLSGLGVCHVECGAQFSVALTCNGHVYTWGKGDYFRLGHGSDQHV-- 2983
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P L++ L G KV + G LH + + G+V+
Sbjct: 2984 -------RWPTLVEGLRGKKVIGVSVGALHCLAVTDAGQVF------------------- 3017
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G GSI V P VQG + +V+CG H+ A
Sbjct: 3018 -----------AWGDNDHGQQGNGSITVNRRPTLVQG-IDGIKITRVACGSSHSVA 3061
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 158/347 (45%), Gaps = 71/347 (20%)
Query: 92 VYATGLNDFGQLG--------ISENIGY--SLEPLRISGLKKEVVQISTGYHHSSAITVD 141
VY GLND QLG + + + + SL+P+ ++G K + +T
Sbjct: 2700 VYVWGLNDKEQLGGPKGSKIKVPQAVDWTVSLQPISVAGGSKSLF----------LVTQS 2749
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+ Y G+ SNG+LGLG ++ + P ++ LS ++ A+ G ++A+T G+V
Sbjct: 2750 GKAYACGEGSNGRLGLGH--SRNVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVF 2807
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G G+LGHG +S+ TPR I+ L G +V+ AAG HSA + +G +
Sbjct: 2808 SWGEGDDGKLGHGDVTSL---------DTPRCIEALNGFRVRDVAAGSNHSAAVTSSGEL 2858
Query: 260 YIFG-----------------DRAVDKMLFQE-------GNHARRPSLISGGELYTWGSN 295
Y +G + V+ ++ Q A+ +L+ GG +Y+WG
Sbjct: 2859 YTWGLGEYGRLGHGDNLTQLTPKRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDG 2918
Query: 296 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 354
+ G LG G + SP V S V V CG + + A++ G + TWG G
Sbjct: 2919 DFGKLGRGGSEGCSSPCLVDK-LSGLGVCHVECGAQFSVALTCNGHVYTWGKGDYF---- 2973
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHG+D PT+V K + VS G H A+ +
Sbjct: 2974 --------RLGHGSDQHVRWPTLVEGLRGKKVIGVSVGALHCLAVTD 3012
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 171/390 (43%), Gaps = 63/390 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P VC A LA GG TLF +T G VYATG G
Sbjct: 3619 WGHNHRGQLGGVEGAKVKVPTVCEALSALRPIQLA-GGEQTLFAITSDGRVYATGYGAGG 3677
Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S + LE L+ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3678 RLGIGGAESVTVPSLLESLQHVFVKK--VAVNSGGKHCLALSSEGEVYSWGEGEDGKLGH 3735
Query: 158 GKKAAKVIPI--PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G K +P P +E L G A G S A+T G++ +WG G GRLGHG
Sbjct: 3736 GNK----LPCDRPRIIESLRGKDVVDVACGGAHSAAITALGELYTWGKGRYGRLGHGD-- 3789
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI--DENGRVYIFGDRAVDKML 271
S + P+L++ L G +V A +G + I +E G V+ +GD K+
Sbjct: 3790 -------SDDQLKPKLVEALLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLG 3842
Query: 272 FQEGNHARRPSLI----------------------SGGELYTWGSNENGCLGIGSIDVLH 309
+ + P+ I + G +YTWG + LG G + +
Sbjct: 3843 RGGSDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSVYTWGKGDYHRLGHGVDEHVR 3902
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
P++V V +S G H ++ G++ TW G + GQLG G
Sbjct: 3903 RPKKVMT-LQGKKVISISTGALHCVVCTDQGEVYTW------------GDNDEGQLGDGT 3949
Query: 369 DVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V +N K +VSCG HT A
Sbjct: 3950 TTGIQKPRLVAALQNKKINRVSCGSAHTVA 3979
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 128/334 (38%), Gaps = 103/334 (30%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G++Y WG N GQLG G + AKV
Sbjct: 3614 GQIYGWGHNHRGQLG-GVEGAKVKVPTVCEALSALRPIQLAGGEQTLFAITSDGRVYATG 3672
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ +P+ +E L +F K+ A+ G + +A++ G+V SWG G G+
Sbjct: 3673 YGAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEGEDGK 3732
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + L R PR+I+ L G V A G HSA I G +Y +G
Sbjct: 3733 LGHGNK---LPCDR------PRIIESLRGKDVVDVACGGAHSAAITALGELYTWGKGRYG 3783
Query: 269 KMLFQEGNHARRPSLI--------------------------SGGELYTWGSNENGCLGI 302
++ + + +P L+ GG +++WG + G LG
Sbjct: 3784 RLGHGDSDDQLKPKLVEALLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGR 3843
Query: 303 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 361
G D P +++ S + +V CG + + A+S G + TWG G H
Sbjct: 3844 GGSDGCKIPTKIES-LSGLGIIKVECGSQFSVALSNNGSVYTWGKGDYH----------- 3891
Query: 362 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
+LGHG D P V + K + +S G H
Sbjct: 3892 -RLGHGVDEHVRRPKKVMTLQGKKVISISTGALH 3924
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 78/169 (46%), Gaps = 7/169 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + CG ++ L+ G VY G D+ +
Sbjct: 3833 WGDGDYGKLGRGGSDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSVYTWGKGDYHR 3892
Query: 103 LG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + E++ + + + G K+V+ ISTG H T GE+Y WG N GQLG G
Sbjct: 3893 LGHGVDEHVRRPKKVMTLQG--KKVISISTGALHCVVCTDQGEVYTWGDNDEGQLGDGTT 3950
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
I P V L + + G +VA + K S GS RL
Sbjct: 3951 TG--IQKPRLVAALQNKKINRVSCGSAHTVAWS-TCKGCSTPVAGSSRL 3996
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 94/230 (40%), Gaps = 47/230 (20%)
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
QS GGG++ WG G+LG + + + P + + L ++ A G
Sbjct: 3606 QSWTAVGGGQIYGWGHNHRGQLGGVEGAKV---------KVPTVCEALSALRPIQLAGGE 3656
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI----------------------- 284
I +GRVY G A ++ PSL+
Sbjct: 3657 QTLFAITSDGRVYATGYGAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLAL 3716
Query: 285 -SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKIL 342
S GE+Y+WG E+G LG G+ P ++ + VD V+CG H+AAI+ G++
Sbjct: 3717 SSEGEVYSWGEGEDGKLGHGNKLPCDRPRIIESLRGKDVVD-VACGGAHSAAITALGELY 3775
Query: 343 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
TWG G G+LGHG+ D + P +V + + V+CG
Sbjct: 3776 TWGKG------------RYGRLGHGDSDDQLKPKLVEALLGYRVMDVACG 3813
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 116/280 (41%), Gaps = 37/280 (13%)
Query: 144 LYMWGKNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
+ + G+N L L AA +++P + E F K + +V+G +V W
Sbjct: 2644 IQLVGRNVGNSLPLDDSAALARLLPPDFEFEQGDSAFNKSQQSVIQPISSVSGAKRVYVW 2703
Query: 202 GAGGSGRLG--HGQESSILGFLRSTSEYTPRLI----KELEGVKVKIAA----------A 245
G +LG G + + + T P + K L V A
Sbjct: 2704 GLNDKEQLGGPKGSKIKVPQAVDWTVSLQPISVAGGSKSLFLVTQSGKAYACGEGSNGRL 2763
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQE-GNHARRPSLISGGELYTWGSNENGCLGIGS 304
G HS ++ ++ V K+ G HA +L + G +++WG ++G LG G
Sbjct: 2764 GLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHAL--ALTADGRVFSWGEGDDGKLGHGD 2821
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ L +P ++ + V V+ G H+AA+ S G++ TWG G G+
Sbjct: 2822 VTSLDTPRCIEA-LNGFRVRDVAAGSNHSAAVTSSGELYTWGLG------------EYGR 2868
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFN--HTGALLE 401
LGHG+++ + P V + +QVSCG T AL+E
Sbjct: 2869 LGHGDNLTQLTPKRVESLVGQRVVQVSCGSRDAQTLALVE 2908
>gi|338530520|ref|YP_004663854.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337256616|gb|AEI62776.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 1457
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 168/378 (44%), Gaps = 57/378 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS R RPV S S+ A+A GG+HT+ L G V+A G N GQ
Sbjct: 474 WGRNAAGQLGDGSTRDRARPVAVSGLT--SVVAVATGGSHTMALRGDGTVWAWGYNALGQ 531
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L P+R++ L VV ++ G + S A+ DG ++ WG+ GQ+G G
Sbjct: 532 LGDGTTV-DRLTPVRVARLDS-VVAVAAGTYFSMALRGDGTVWTWGEGFEGQVGDGGGVQ 589
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V L+ + + A G ++AV G G V +WG G G+LG G S
Sbjct: 590 RLFPV--QVAGLTNV--TRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGTWS------- 638
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ P + L G+ + G HS + +G V +G ++ RP+
Sbjct: 639 --DRFRPVQVPGLTGITA--VSGGRSHSMALHGDGSVRAWGYNGYGQLGDGTFTSRVRPA 694
Query: 283 LISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
++ G G L WG N G LG+G+ P +V+G
Sbjct: 695 VVPGLTGIQALHPSHLHVLALHADGTLRGWGYNRFGQLGLGAAGWSSRPVQVRG---LGR 751
Query: 323 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
VD+++ G HT + +G +L W G ++ GQLG G P +V
Sbjct: 752 VDRLAVGRAHTLMVRPDGAVLAW------------GENASGQLGDGTTTHRAGPVLVRGV 799
Query: 382 ENVKALQVSCGFNHTGAL 399
V++ V+ G H+ AL
Sbjct: 800 PCVRS--VASGVLHSLAL 815
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 152/353 (43%), Gaps = 52/353 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G R + ++ G AH+L L E G V+A G N GQ
Sbjct: 73 WGGNTSGQLG-GEATPLQRLAPAPLPSPRDIVSVVSGEAHSLALDEAGTVWAWGGNSSGQ 131
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P++++GL +VV ++ G HS A+ DG ++ WG N +GQLG G
Sbjct: 132 LGDGTTT-DRVTPMQVAGL-TDVVAVAAGDFHSLALRGDGTVWAWGTNFHGQLGRGHTEP 189
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P P V L G+ A GF+ ++AV G V +WGA SG+LG G
Sbjct: 190 GLTPEP--VPGLEGVVALAA--GFDFTLAVMDDGTVRAWGANSSGQLGDGT--------- 236
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRAV-- 267
T P + + G+ AG H+ + ++G V+ +G DRAV
Sbjct: 237 FTQRLAPVEVAHISGISA--VTAGTYHAVALGKDGGVWTWGANSSGQLGDGAWSDRAVPA 294
Query: 268 -----DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
+++ A +L+ G + WG+N +G LG D +P V G S
Sbjct: 295 RVPGLERVKAVASMDASSLALLEAGSVLAWGANGSGQLGDSGTDDRATPGEVPGLRS--- 351
Query: 323 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
V V G +H A+ G W WGG GQLGHG ++ P
Sbjct: 352 VAAVVGGAQHALAL-RGDGTLWAWGGGL----------AGQLGHGGSERHVVP 393
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 137/295 (46%), Gaps = 37/295 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ SR PV + +K + A+ GG H L + G V+A G N FGQ
Sbjct: 1180 WGANGFGQLGDGTTLSRTTPVRVAGLQK--VVAIGAGGYHALAVRSDGSVWAWGYNAFGQ 1237
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+R+ GL V ++ G HHS A+ DG L WG N+ GQLG G
Sbjct: 1238 LG-DGTAESRLLPVRVEGLSN-VTSVAGGDHHSLALLADGSLGAWGNNAAGQLGDGTGTT 1295
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ + V+ + G+ +A G ++A+ G G V +WG +LG G +S+
Sbjct: 1296 RYSRV--WVKGVDGVVEVRA--GAAHTLALRGDGTVWTWGDNTHSQLGAGDDST------ 1345
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP- 281
+ PR + L GV AG HS + G V+ +G + ++ + + P
Sbjct: 1346 -RTRIVPRPVPGLSGVTA--IGAGARHSFAVGPKGTVWAWGRNSHGQLGLGDNANRAEPL 1402
Query: 282 --------SLISGGELYT-----------WGSNENGCLGIGSIDVLHSPERVQGP 317
S++SGG ++ WGS+ +G LG+G+ SP +V P
Sbjct: 1403 RVKELAEVSVVSGGADFSLAMQRDGTVSSWGSSLHGALGLGTAGQRSSPGQVALP 1457
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 160/386 (41%), Gaps = 67/386 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ SR P + A +L L G +A G N GQ
Sbjct: 824 WGANGRGQLGDGTTASRVIPARVDGLQGAVAVAAGG--DASLALLADGTAWAWGANAHGQ 881
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ P ++ L ++ ++ G H A DG L+ WG N +GQLG G
Sbjct: 882 LGDGSTSDRAV-PGQLK-LPSNIMSVALGETHGLAAGEDGALWAWGANGSGQLGEGSTTP 939
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P P +V+ L G+ + A F S+AV G +WGA SG+LG G
Sbjct: 940 S--PTPVRVKGLEGVASVSAGRAF--SLAVRQDGTAWAWGANPSGQLGDG---------- 985
Query: 223 STSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ ++ R+ K++ VK V+ +AG H + E+G V+ +G D L Q G+ P
Sbjct: 986 --TNHSQRVPKQVTSVKRVRAMSAGAHHVVALGEDGAVWTWG----DNTLGQLGDGTSAP 1039
Query: 282 S-------------------------LISGGELYTWGSNENGCLGIGSIDVLHSP--ERV 314
+ ++ GG + WGSNE G LG G +P R+
Sbjct: 1040 TWMWPRQVPELRDVEAVAAGEQFSVAVLVGGGAHAWGSNEYGQLGDGKTGPRLTPVQVRI 1099
Query: 315 QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
+ PV V +H A+ ++G + WG ++ H GQLG G
Sbjct: 1100 EASKLRQPVRTVRAWAQHAVALMADGTVQAWG---------DNAH---GQLGDGTTERRA 1147
Query: 374 HPTIVNFGENVKALQVSCGFNHTGAL 399
P +V V A VS G H+ AL
Sbjct: 1148 APVVVRGLTGVVA--VSTGAWHSLAL 1171
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 145/344 (42%), Gaps = 52/344 (15%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+A G H+L+++ TG V+A G N GQLG L P + +++V + +G HS
Sbjct: 54 IAAGSQHSLYVSPTGAVWAWGGNTSGQLGGEATPLQRLAPAPLPS-PRDIVSVVSGEAHS 112
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ G ++ WG NS+GQLG G +V P+ +V L+ + A G S+A+ G
Sbjct: 113 LALDEAGTVWAWGGNSSGQLGDGTTTDRVTPM--QVAGLTDVVA--VAAGDFHSLALRGD 168
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG G+LG G L TP + LEGV AAGF + + +
Sbjct: 169 GTVWAWGTNFHGQLGRGHTEPGL---------TPEPVPGLEGVVAL--AAGFDFTLAVMD 217
Query: 256 NGRVYIFGDRA---------VDKMLFQEGNHARRPSLISGGE-----------LYTWGSN 295
+G V +G + ++ E H S ++ G ++TWG+N
Sbjct: 218 DGTVRAWGANSSGQLGDGTFTQRLAPVEVAHISGISAVTAGTYHAVALGKDGGVWTWGAN 277
Query: 296 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSE 355
+G LG G+ P RV G V + A + G +L WG GS
Sbjct: 278 SSGQLGDGAWSDRAVPARVPGLERVKAVASMDA--SSLALLEAGSVLAWGANGS------ 329
Query: 356 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
GQLG D P V +V A V G H AL
Sbjct: 330 ------GQLGDSGTDDRATPGEVPGLRSVAA--VVGGAQHALAL 365
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 170/385 (44%), Gaps = 63/385 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS PV E + +++ G A +L + + G +A G N GQ
Sbjct: 924 WGANGSGQLGEGSTTPSPTPVRVKGLE--GVASVSAGRAFSLAVRQDGTAWAWGANPSGQ 981
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG N + P +++ +K+ V +S G HH A+ DG ++ WG N+ GQLG G A
Sbjct: 982 LGDGTNHSQRV-PKQVTSVKR-VRAMSAGAHHVVALGEDGAVWTWGDNTLGQLGDGTSAP 1039
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P +V L + + A G + SVAV GG +WG+ G+LG G+ L
Sbjct: 1040 TWM-WPRQVPELRDV--EAVAAGEQFSVAVLVGGGAHAWGSNEYGQLGDGKTGPRL---- 1092
Query: 223 STSEYTPRLIKELEGVK----VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
TP ++ +E K V+ A H+ + +G V +GD A ++ +G
Sbjct: 1093 -----TPVQVR-IEASKLRQPVRTVRAWAQHAVALMADGTVQAWGDNAHGQL--GDGTTE 1144
Query: 279 RR--PSLISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQG 316
RR P ++ G G ++ WG+N G LG G+ +P RV G
Sbjct: 1145 RRAAPVVVRGLTGVVAVSTGAWHSLALRSDGTVWAWGANGFGQLGDGTTLSRTTPVRVAG 1204
Query: 317 PFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
V + G H A+ S+G + W G+++ GQLG G + P
Sbjct: 1205 ---LQKVVAIGAGGYHALAVRSDGSVWAW------------GYNAFGQLGDGTAESRLLP 1249
Query: 376 TIVNFGENVKALQVSCGFNHTGALL 400
V NV + V+ G +H+ ALL
Sbjct: 1250 VRVEGLSNVTS--VAGGDHHSLALL 1272
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 164/381 (43%), Gaps = 57/381 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ S+ P ++ ++ ++A++ G H + L E G V+ G N GQ
Sbjct: 974 WGANPSGQLGDGTNHSQRVPKQVTSVKR--VRAMSAGAHHVVALGEDGAVWTWGDNTLGQ 1031
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + P ++ L+ +V ++ G S A+ V G + WG N GQLG GK
Sbjct: 1032 LGDGTSAPTWMWPRQVPELR-DVEAVAAGEQFSVAVLVGGGAHAWGSNEYGQLGDGKTGP 1090
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQ-SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ P+ ++E + + Q +VA+ G V +WG G+LG G
Sbjct: 1091 RLTPVQVRIEASKLRQPVRTVRAWAQHAVALMADGTVQAWGDNAHGQLGDGT-------- 1142
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----------- 270
+ P +++ L GV + G HS + +G V+ +G ++
Sbjct: 1143 -TERRAAPVVVRGLTGVVA--VSTGAWHSLALRSDGTVWAWGANGFGQLGDGTTLSRTTP 1199
Query: 271 -----------LFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
+ G HA ++ S G ++ WG N G LG G+ + P RV+G
Sbjct: 1200 VRVAGLQKVVAIGAGGYHAL--AVRSDGSVWAWGYNAFGQLGDGTAESRLLPVRVEG--- 1254
Query: 320 ESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
S V V+ G H+ A +++G + W G+++ GQLG G V
Sbjct: 1255 LSNVTSVAGGDHHSLALLADGSLGAW------------GNNAAGQLGDGTGTTRYSRVWV 1302
Query: 379 NFGENVKALQVSCGFNHTGAL 399
+ V ++V G HT AL
Sbjct: 1303 KGVDGV--VEVRAGAAHTLAL 1321
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 142/352 (40%), Gaps = 63/352 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R P E+ +KA+A A +L L E G V A G N GQ
Sbjct: 274 WGANSSGQLGDGAWSDRAVPARVPGLER--VKAVASMDASSLALLEAGSVLAWGANGSGQ 331
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S + P + GL+ V + G H+ A+ DG L+ WG GQLG G
Sbjct: 332 LGDSGTDDRA-TPGEVPGLRS-VAAVVGGAQHALALRGDGTLWAWGGGLAGQLGHGGSER 389
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
V+P P L A G S+A G G V SWG G+LG G + +R
Sbjct: 390 HVVPAP----LLRLADVASMAAGSFHSLAALGDGTVWSWGRNTYGQLGDGTTAERHAAVR 445
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
++ L G++ +AA+G HS + +G V
Sbjct: 446 ---------VEGLSGIR-GVAASGH-HSLAVGADGTV----------------------- 471
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKIL 342
+ WG N G LG GS P V G S V V+ G HT A+ G
Sbjct: 472 -------WAWGRNAAGQLGDGSTRDRARPVAVSGLTS---VVAVATGGSHTMAL-RGDGT 520
Query: 343 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
W W G+++ GQLG G VD + P V ++V A+ F+
Sbjct: 521 VWAW----------GYNALGQLGDGTTVDRLTPVRVARLDSVVAVAAGTYFS 562
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 150/363 (41%), Gaps = 58/363 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPV---VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ +YG+LG G R PV + ++ + ++ + H + L G V A G N
Sbjct: 1075 WGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQPVRTVRAWAQHAVALMADGTVQAWGDNA 1134
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG P+ + GL VV +STG HS A+ DG ++ WG N GQLG G
Sbjct: 1135 HGQLG-DGTTERRAAPVVVRGLTG-VVAVSTGAWHSLALRSDGTVWAWGANGFGQLGDGT 1192
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + A G ++AV G V +WG G+LG G S L
Sbjct: 1193 TLSRTTPV--RVAGLQKVVAIGA--GGYHALAVRSDGSVWAWGYNAFGQLGDGTAESRL- 1247
Query: 220 FLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFGDRA------------ 266
L +EG+ V A G HS + +G + +G+ A
Sbjct: 1248 -----------LPVRVEGLSNVTSVAGGDHHSLALLADGSLGAWGNNAAGQLGDGTGTTR 1296
Query: 267 --------VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG--SIDVLHSPERVQG 316
VD ++ A +L G ++TWG N + LG G S P V G
Sbjct: 1297 YSRVWVKGVDGVVEVRAGAAHTLALRGDGTVWTWGDNTHSQLGAGDDSTRTRIVPRPVPG 1356
Query: 317 PFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 376
S V + G +H+ A+ K W W G +S GQLG G++ + P
Sbjct: 1357 ---LSGVTAIGAGARHSFAVGP-KGTVWAW----------GRNSHGQLGLGDNANRAEPL 1402
Query: 377 IVN 379
V
Sbjct: 1403 RVK 1405
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 116/286 (40%), Gaps = 56/286 (19%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI---PIPTKVECLSGIFTKQA 182
++I+ G HS ++ G ++ WG N++GQLG + + P+P+ + +S + +
Sbjct: 52 MRIAAGSQHSLYVSPTGAVWAWGGNTSGQLGGEATPLQRLAPAPLPSPRDIVSVVSGEAH 111
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
+L +++ G V +WG SG+LG G +T TP + L V
Sbjct: 112 SLALDEA------GTVWAWGGNSSGQLGDGT---------TTDRVTPMQVAGL--TDVVA 154
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG---------------- 286
AAG HS + +G V+ +G ++ P + G
Sbjct: 155 VAAGDFHSLALRGDGTVWAWGTNFHGQLGRGHTEPGLTPEPVPGLEGVVALAAGFDFTLA 214
Query: 287 ----GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 341
G + WG+N +G LG G+ +P V S + V+ G H A+ +G +
Sbjct: 215 VMDDGTVRAWGANSSGQLGDGTFTQRLAPVEVA---HISGISAVTAGTYHAVALGKDGGV 271
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 387
TW G +S GQLG G D P V E VKA+
Sbjct: 272 WTW------------GANSSGQLGDGAWSDRAVPARVPGLERVKAV 305
>gi|387541132|gb|AFJ71193.1| RCC1 and BTB domain-containing protein 2 [Macaca mulatta]
Length = 551
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + + P R++G K VV I+ G A+ GE+Y+WG N NGQLGLG
Sbjct: 183 QVGSGSTVNQPI-PRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGS 241
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 242 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 293
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y + E + + ++IAA H SA + G VY++G
Sbjct: 294 --KSNQSYPTPVTMEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 116/226 (51%), Gaps = 16/226 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
+ G G LGLG ++S P + + +L+ G G H + T G V+ G N +
Sbjct: 69 VLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAY 128
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG + + L P +IS K+V++++ G +HS +T DGE++ WG N++GQ+G G
Sbjct: 129 SQLG-NGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSG 187
Query: 159 KKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ PIP +V CL A G +AV G+V WG G+G+LG G
Sbjct: 188 STVNQ--PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGS---- 241
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S ++ TP + L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 242 -----SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 154/368 (41%), Gaps = 67/368 (18%)
Query: 45 NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
+GD G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 9 SGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
G N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+
Sbjct: 69 VLGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNA 127
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QLG G ++P LS + A G S+ +T G+V +WG SG++G
Sbjct: 128 YSQLGNGTTNHGLVPCQISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G + ++ PR + + C+ V I A +M
Sbjct: 187 GS---------TVNQPIPRRV-----------------TGCLQNKVVVTI----ACGQMC 216
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 331
+++ GE+Y WG N NG LG+GS +P RV V +V+CG+
Sbjct: 217 CM--------AVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGYA 267
Query: 332 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 390
HT ++ EG++ WG +S GQLG GN + +PT V ++ +
Sbjct: 268 HTLVLTDEGQVYAWG------------ANSYGQLGTGNKSNQSYPTPVTMEKDRIIEIAA 315
Query: 391 CGFNHTGA 398
C HT A
Sbjct: 316 CHSTHTSA 323
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 112/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ LSG K A+L + V T
Sbjct: 62 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIASLSYGSGPHIVLATTE 117
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L + ++ + + + E+ A G HS
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEV--------ACGSYHSLV--- 166
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 167 ---------------------------LTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG A+ + G++ WG+ G+ GQLG G+ +
Sbjct: 200 GCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLGLGSSGNQPT 247
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTD 274
>gi|328701601|ref|XP_001942852.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
[Acyrthosiphon pisum]
Length = 4257
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 112/365 (30%), Positives = 167/365 (45%), Gaps = 70/365 (19%)
Query: 44 GNGDYGRLGLGSLESRWRP----VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
G YGRLGLG+ ++ P + C + S K C G H+L L++TG VY+ G D
Sbjct: 398 GKNSYGRLGLGNSSNQPVPKRININCKIKQVSSSKG--CDG-HSLALSDTGEVYSWGDGD 454
Query: 100 FGQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+G+LG ++ EP I G + K + +S GY HS+A+T DG+LY WG+ +G+LG
Sbjct: 455 YGKLG-HGDVATHKEPKLIQGPFIGKVIELVSAGYRHSAAVTSDGQLYTWGEGDHGRLGH 513
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESS 216
G + IPT V+ LS + A G ++A + G V S+G+G +G+LGHG
Sbjct: 514 GDCNPRF--IPTLVKSLSDMPVGYVACGSTHTLACSRDGNTVWSFGSGDNGKLGHGNTIR 571
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ Y P+ I+ L K+K AAG S
Sbjct: 572 L---------YKPQKIEGLRHYKIKKVAAGIHFSV------------------------- 597
Query: 277 HARRPSLISGGELYTWGSNENGCLGIGSIDV-LHSPERVQGPFSESPVDQVSCGWKHTAA 335
+L GE++TWG N LG GS ++ L SP V+ + +D +S G H A
Sbjct: 598 -----ALTCTGEVFTWGQGSN--LGCGSSEITLFSPAVVEDLMQQMIID-ISVGDSHCLA 649
Query: 336 ISEG-KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI-HPTIVNFGENVKALQVSCGF 393
++ + WG G GQ G G+ + P+ V E + Q+S G
Sbjct: 650 LTRNCAVYAWGSNGK------------GQCGQGHSTSPVSRPSKVINLEGKQINQISAGT 697
Query: 394 NHTGA 398
+H+ A
Sbjct: 698 SHSVA 702
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 146/317 (46%), Gaps = 38/317 (11%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
G G+YGRLG G +S + SA + + ++ H+L LTETG V++ G DF
Sbjct: 3451 GEGNYGRLGHGHSDSLPNLTMISALQGFVITQVSTSIGSDGHSLALTETGEVFSWGDGDF 3510
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG N L S V+Q++ G+ HS+ ++ DGE+Y++G +G+LGLG
Sbjct: 3511 GKLGHGNNERQRKPKLIESLYDVVVIQVACGHKHSAVLSQDGEVYVFGSAEHGKLGLGGH 3570
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
K PTK+ + K A G ++ + G V ++G G G+LG G + I
Sbjct: 3571 INK--KRPTKIVHKGFLNIKYIACGQNHTICI-GENVVWAFGEGEGGKLGIGSKKDI--- 3624
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY-------------IFGDRAV 267
Y P+ I L G +K A G + + E+G +Y ++ ++ +
Sbjct: 3625 ------YVPQEIITLNGKNIKKAYCGNGFTMFLSEDGELYSCGSDNLQDATDVLYTEKLI 3678
Query: 268 DKMLFQ-----EGNHARRPS----LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
+ +F+ + A P L + G ++ WG+N G LG G + P +Q
Sbjct: 3679 PEKIFEFQGQIVTDVATGPDHVLVLTARGHVWAWGNNCEGILGFGHDLPVQKPMIIQI-L 3737
Query: 319 SESPVDQVSCGWKHTAA 335
S+ + Q++ H AA
Sbjct: 3738 SDKNIKQIATSRTHCAA 3754
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 119/263 (45%), Gaps = 32/263 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G R+ P + + + +ACG HTL + G V++ G D G
Sbjct: 503 WGEGDHGRLGHGDCNPRFIPTLVKSLSDMPVGYVACGSTHTLACSRDGNTVWSFGSGDNG 562
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG I +P +I GL+ ++ +++ G H S A+T GE++ WG+ SN LG G
Sbjct: 563 KLGHGNTIRL-YKPQKIEGLRHYKIKKVAAGIHFSVALTCTGEVFTWGQGSN--LGCGSS 619
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P VE L ++G +A+T V +WG+ G G+ G G +S +
Sbjct: 620 EITLFS-PAVVEDLMQQMIIDISVGDSHCLALTRNCAVYAWGSNGKGQCGQGHSTSPVS- 677
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSA------------------CIDENGRVYIF 262
P + LEG ++ +AG HS CID + + +
Sbjct: 678 -------RPSKVINLEGKQINQISAGTSHSVAWTTLPPDRQTNVWHSPFCIDLHESTFKW 730
Query: 263 GDRAVDKMLFQEGNHARRPSLIS 285
+ ++K Q +H P+ I+
Sbjct: 731 LRQFIEKYCEQIESHESTPNDIN 753
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 122/278 (43%), Gaps = 54/278 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V Q+ G + + I G + GKNS G+LGLG + + P+P ++ I ++
Sbjct: 374 DVQQVEAGQYCTFIIDTKGCVSACGKNSYGRLGLGNSSNQ--PVPKRININCKIKQVSSS 431
Query: 184 LGFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVK 241
G + S+A++ G+V SWG G G+LGHG + + P+LI+ G ++
Sbjct: 432 KGCDGHSLALSDTGEVYSWGDGDYGKLGHGDVA---------THKEPKLIQGPFIGKVIE 482
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLG 301
+ +AG+ HSA + S G+LYTWG ++G LG
Sbjct: 483 LVSAGYRHSAAV------------------------------TSDGQLYTWGEGDHGRLG 512
Query: 302 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSG 361
G + P V+ S+ PV V+CG HT A S W +G
Sbjct: 513 HGDCNPRFIPTLVKS-LSDMPVGYVACGSTHTLACSRDGNTVWSFGS----------GDN 561
Query: 362 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G+LGHGN + P + + K +V+ G + + AL
Sbjct: 562 GKLGHGNTIRLYKPQKIEGLRHYKIKKVAAGIHFSVAL 599
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 166/394 (42%), Gaps = 68/394 (17%)
Query: 40 AALWGNGDYGRLG---LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
A LWGNG G+LG +G + W P+ F+ + + CG T LT G V + G
Sbjct: 3394 AYLWGNGRNGQLGDTAVGQCINIWSPIKIQNFK--IAQRIVCGQNCTFVLTSQGTVLSCG 3451
Query: 97 LNDFGQLGISENIGYSLEPL-RISGLKKEVV-QISTGY---HHSSAITVDGELYMWGKNS 151
++G+LG SL L IS L+ V+ Q+ST HS A+T GE++ WG
Sbjct: 3452 EGNYGRLGHGH--SDSLPNLTMISALQGFVITQVSTSIGSDGHSLALTETGEVFSWGDGD 3509
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
G+LG G + P +E L + Q A G + S ++ G+V +G+ G+LG
Sbjct: 3510 FGKLGHGNNERQ--RKPKLIESLYDVVVIQVACGHKHSAVLSQDGEVYVFGSAEHGKLGL 3567
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD------- 264
G ++ P I + +K A G H+ CI EN V+ FG+
Sbjct: 3568 GGH---------INKKRPTKIVHKGFLNIKYIACGQNHTICIGENV-VWAFGEGEGGKLG 3617
Query: 265 --RAVDKMLFQE-----GNHARRPS--------LISGGELYTWGSNENGCLGIGSIDVLH 309
D + QE G + ++ L GELY+ GS+ + DVL+
Sbjct: 3618 IGSKKDIYVPQEIITLNGKNIKKAYCGNGFTMFLSEDGELYSCGSDNLQ----DATDVLY 3673
Query: 310 S----PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQL 364
+ PE++ F V V+ G H ++ G + W W G++ G L
Sbjct: 3674 TEKLIPEKI-FEFQGQIVTDVATGPDHVLVLTARGHV--WAW----------GNNCEGIL 3720
Query: 365 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G G+D+ P I+ + Q++ H A
Sbjct: 3721 GFGHDLPVQKPMIIQILSDKNIKQIATSRTHCAA 3754
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 111/258 (43%), Gaps = 55/258 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
E++MWG NS+ Q G A +V IP V LS + +Q G + + G V +
Sbjct: 342 SEVFMWGSNSSNQHAEG--ATEVTDIPRLVRSLSDV--QQVEAGQYCTFIIDTKGCVSAC 397
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G GRLG G S+++ P+ I K+K ++
Sbjct: 398 GKNSYGRLGLGN---------SSNQPVPKRINI--NCKIKQVSSS--------------- 431
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+G +L GE+Y+WG + G LG G + P+ +QGPF
Sbjct: 432 ------------KGCDGHSLALSDTGEVYSWGDGDYGKLGHGDVATHKEPKLIQGPFIGK 479
Query: 322 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
++ VS G++H+AA+ S+G++ TWG G G+LGHG+ PT+V
Sbjct: 480 VIELVSAGYRHSAAVTSDGQLYTWGEGD------------HGRLGHGDCNPRFIPTLVKS 527
Query: 381 GENVKALQVSCGFNHTGA 398
++ V+CG HT A
Sbjct: 528 LSDMPVGYVACGSTHTLA 545
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 24/228 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G + + P ++ F ++ ++ G H+ +T G +Y G D G
Sbjct: 450 WGDGDYGKLGHGDVATHKEPKLIQGPFIGKVIELVSAGYRHSAAVTSDGQLYTWGEGDHG 509
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY-----HHSSAITVDGE-LYMWGKNSNGQL 155
+LG + P I L K + + GY H+ A + DG ++ +G NG+L
Sbjct: 510 RLGHGD-----CNPRFIPTLVKSLSDMPVGYVACGSTHTLACSRDGNTVWSFGSGDNGKL 564
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + P K+E L K+ A G SVA+T G+V +WG G + LG G
Sbjct: 565 GHGNTIR--LYKPQKIEGLRHYKIKKVAAGIHFSVALTCTGEVFTWGQGSN--LGCGSSE 620
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
L ++P ++++L + + G H + N VY +G
Sbjct: 621 ITL--------FSPAVVEDLMQQMIIDISVGDSHCLALTRNCAVYAWG 660
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 135/337 (40%), Gaps = 69/337 (20%)
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLK------KEVVQISTGYHHSSAITVDGELYM 146
+++GLN+ EN ++L IS K ++++Q H + Y+
Sbjct: 3344 FSSGLNE-------ENDDHNLWSEAISNNKWTIEADQQIIQWFNTTPHDWQPYTKCDAYL 3396
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG NGQLG + I I + ++ + ++ G + +T G VLS G G
Sbjct: 3397 WGNGRNGQLG-DTAVGQCINIWSPIKIQNFKIAQRIVCGQNCTFVLTSQGTVLSCGEGNY 3455
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEG-----VKVKIAAAGFLHSACIDENGRVYI 261
GRLGHG S+ +I L+G V I + G HS + E G V+
Sbjct: 3456 GRLGHGHSDSLPNL---------TMISALQGFVITQVSTSIGSDG--HSLALTETGEVFS 3504
Query: 262 FGDRAVDKMLFQEGNHARRPSLISG----------------------GELYTWGSNENGC 299
+GD K+ R+P LI GE+Y +GS E+G
Sbjct: 3505 WGDGDFGKLGHGNNERQRKPKLIESLYDVVVIQVACGHKHSAVLSQDGEVYVFGSAEHGK 3564
Query: 300 LGI-GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGH 358
LG+ G I+ + V F + ++CG HT I E + +G G
Sbjct: 3565 LGLGGHINKKRPTKIVHKGFLN--IKYIACGQNHTICIGENVVWAFGEG----------- 3611
Query: 359 SSGGQLGHGNDVD-YIHPTIVNF-GENVKALQVSCGF 393
GG+LG G+ D Y+ I+ G+N+K GF
Sbjct: 3612 -EGGKLGIGSKKDIYVPQEIITLNGKNIKKAYCGNGF 3647
>gi|224008819|ref|XP_002293368.1| guanyl nucleotide exchange factor [Thalassiosira pseudonana
CCMP1335]
gi|220970768|gb|EED89104.1| guanyl nucleotide exchange factor [Thalassiosira pseudonana
CCMP1335]
Length = 400
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 159/358 (44%), Gaps = 43/358 (12%)
Query: 41 ALWGNGDYGRLGLGSLESRWRPVVC---SAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
A WG G+ G G E P + + ++ A GG L L ++G V + G
Sbjct: 5 ASWGVAKRGQCGHGDREDVSEPKLLLGKIGWGVRIVQVAAGGGQLDLMLKKSGRVLSFGT 64
Query: 98 NDFGQLGISENIGYSL----EPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSN 152
+G LG + G L P I LK E V+ +S G HS +T DG++Y WG+
Sbjct: 65 AQYGALGHGYDAGKQLSDCLRPRYIDALKNEKVICVSAGELHSGCVTADGDVYTWGEGFC 124
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLGLG + ++P + L + G ++ VT G+V SWG G G L
Sbjct: 125 GQLGLGDRRPHLLPEQVTLGGLEDECVSNMSCGCRHTLVVTEEGEVFSWGLGRYGVL--- 181
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA------ 266
++ L + + P+L+ L + +AG HS +DE+G +Y FG A
Sbjct: 182 -DALNLTLDDPSDQCFPKLVDALGAFRAVGVSAGHRHSMVLDEHGGLYTFGSGASGALGH 240
Query: 267 ---------VDKMLFQEGNHARRPSLISG----------GELYTWGSNENGCLGIGSIDV 307
V M F+E N+ R + +G G++Y WG + G +G+G+ +
Sbjct: 241 GDLVGQEFPVKVMQFEE-NNVRIHQMSAGVDMSMAVSTTGDVYAWGKAKEGRIGLGNNND 299
Query: 308 LHSPERVQ-GPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ P +V G + VD V CG+ H+ I +G + G G G +DG ++GG
Sbjct: 300 ICLPRKVDVGDANFKGVD-VECGYVHSLIIGLDGSVYQCGGVGVDG--KDDGQNTGGD 354
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 96/238 (40%), Gaps = 44/238 (18%)
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK-VKIAAAGFLHSACI 253
G + SWG G+ GHG + SE L K GV+ V++AA G +
Sbjct: 1 GSGIASWGVAKRGQCGHGDREDV-------SEPKLLLGKIGWGVRIVQVAAGGGQLDLML 53
Query: 254 DENGRVYIFG----------------------DRAVD-----KMLFQEGNHARRPSLISG 286
++GRV FG R +D K++ + +
Sbjct: 54 KKSGRVLSFGTAQYGALGHGYDAGKQLSDCLRPRYIDALKNEKVICVSAGELHSGCVTAD 113
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQ-GPFSESPVDQVSCGWKHTAAIS-EGKILTW 344
G++YTWG G LG+G PE+V G + V +SCG +HT ++ EG++ +W
Sbjct: 114 GDVYTWGEGFCGQLGLGDRRPHLLPEQVTLGGLEDECVSNMSCGCRHTLVVTEEGEVFSW 173
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 402
G G +G L + D P +V+ +A+ VS G H+ L E+
Sbjct: 174 GL-GRYGVLDAL------NLTLDDPSDQCFPKLVDALGAFRAVGVSAGHRHSMVLDEH 224
>gi|354487926|ref|XP_003506122.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Cricetulus
griseus]
gi|344253822|gb|EGW09926.1| RCC1 and BTB domain-containing protein 2 [Cricetulus griseus]
Length = 551
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 115/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++G K V+ I+ G S A+ GE+Y+WG N NGQLGLG
Sbjct: 183 QVGSGSTANQPI-PRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS 241
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 242 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 293
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y ++ E + + ++IAA H SA + G VY++G
Sbjct: 294 --KSNQSYPTPVVVEKDRI-IEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 116/219 (52%), Gaps = 16/219 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG+G ++S P ++ + +L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGIGDIQSTIEPRRLNSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++ TP + L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 147/343 (42%), Gaps = 63/343 (18%)
Query: 64 VCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
+CS E S++ AC G L+ T ++ G N G LGI + I ++EP R++
Sbjct: 36 LCSEEELQSIRQ-ACVFGSAGNEVLYTTVDDEIFVLGTNCSGCLGIGD-IQSTIEPRRLN 93
Query: 120 GLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
L K++ +S G H T DGE++ WG N+ QLG G ++P LS
Sbjct: 94 SLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN-LSNK 152
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELE 236
+ A G S+ +T G+V +WG SG++G G + ++ PR + L+
Sbjct: 153 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRVTGCLQ 203
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNE 296
V A G + S +++ GE+Y WG N
Sbjct: 204 NKVVMNIACGQMCSM------------------------------AVVDTGEVYVWGYNG 233
Query: 297 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSE 355
NG LG+GS +P RV V +V+CG+ HT ++ EG++ WG
Sbjct: 234 NGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWG---------- 282
Query: 356 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 283 --ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 323
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 112/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TVD E+++ G N +G LG+G + + P ++ L+G K A+L + V T
Sbjct: 62 TVDDEIFVLGTNCSGCLGIGDIQSTIEP--RRLNSLTG--KKIASLSYGSGPHIVLATTD 117
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLV--- 166
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 167 ---------------------------LTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG + A+ + G++ WG+ G+ GQLG G+ +
Sbjct: 200 GCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGN------------GQLGLGSSGNQPT 247
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTD 274
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 341 --SVVLPHLTHFCCTDDVF 357
>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia stuttgartiensis]
Length = 1413
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 160/345 (46%), Gaps = 55/345 (15%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
++ G HTL L G V+A G N GQLG I S P+++SGL +V+ I+ G +H+
Sbjct: 1044 ISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRS-TPVQVSGLT-DVIAIAGGDYHT 1101
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ D ++ WG NS GQLG G + IP P V L+ I A G+ ++A+
Sbjct: 1102 IALKSDNTVWAWGSNSYGQLGDGTITNRSIPTP--VTYLTNII--AIAGGYVHTIALKSD 1157
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG-FLHSACID 254
G V +WG G G+LG G +T+ TP + L V IA AG ++H+ +
Sbjct: 1158 GTVWAWGYNGYGQLGDGS---------TTNRSTPVQVSGLTDV---IAIAGEYVHTVALK 1205
Query: 255 ENGRVYIFG-------------DRA-------VDKMLFQEGNHARRPSLISGGELYTWGS 294
+G V+ +G +R+ + ++ G + +L S G ++TWG
Sbjct: 1206 SDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIAIAGGYVHTIALKSDGTVWTWGW 1265
Query: 295 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFS 354
N +G LG G+ +P +V G + ++ G HT A+ + W W
Sbjct: 1266 NNSGQLGDGTTINRLTPVQVSG---LTDAIAIAGGDYHTIALKSDNTV-WAW-------- 1313
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G +S GQLG G ++ + P V A+ ++ G HT AL
Sbjct: 1314 --GSNSYGQLGDGTTINRLTP--VQVSGLTDAIAIAGGDYHTIAL 1354
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 159/358 (44%), Gaps = 67/358 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG S +R PV S + A+A G HT+ L G V+A G N+ GQ
Sbjct: 167 WGANWNGQLGDESTTNRSTPVQVSGLTD--VIAIAGGAYHTIALKSDGTVWAWGNNEGGQ 224
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+++SGL +V+ I+ GY H+ A+ DG ++ WG N G+LG G
Sbjct: 225 LGDGSTTDRS-TPVQVSGLT-DVIAIAGGYAHTIALKSDGTVWAWGDNEGGRLGDGSTTN 282
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ IP+ KV LS + A G ++A+ G V +WG G+LG G
Sbjct: 283 RSIPV--KVGGLSDVI--AIAGGNAHTIALKSDGTVWAWGDNEGGQLGDGS--------- 329
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ TP + L V A G+ H+ + +G V
Sbjct: 330 TTNRSTPVKVSGLA--DVIAIAGGYSHTIVLRSDGTV----------------------- 364
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 341
+TWG NE G LG GS +P +V G + V ++ G HT A+ S+G +
Sbjct: 365 -------WTWGHNEGGQLGDGSTTNRSTPVQVSG---LADVIAIAGGVYHTIAVKSDGTM 414
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
W G++ GQLG G ++ P VN +V A ++ G+ HT A+
Sbjct: 415 WAW------------GYNWYGQLGDGTTINSSTPVQVNGLTDVIA--IAGGYYHTIAM 458
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 148/322 (45%), Gaps = 43/322 (13%)
Query: 50 RLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENI 109
+LG GS PV S A+A G HT+ L G V+ G N+ GQLG I
Sbjct: 622 QLGDGSTTDSSTPVQVSGLTD--AIAIAGGVYHTIALKSDGTVWTWGWNNSGQLGDGTTI 679
Query: 110 GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPT 169
S P+++ GL +V+ I+ G +H+ A+ DG ++ WG N GQLG G + P+
Sbjct: 680 NRS-TPVQVIGL-TDVIAIAGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRSTPV-- 735
Query: 170 KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
+V+ L+ I A G+ S+A+ G V +WG G G+LG G +T TP
Sbjct: 736 QVKGLADII--AIAGGYVHSIALKSDGTVWAWGYNGYGQLGDGS---------TTDHLTP 784
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG--- 286
+ L + A G++H+ + +G V+ +G ++ ++ P +SG
Sbjct: 785 VQVSGL--TDIIAIAGGYIHTIALKSDGTVWAWGHNEGGQLGDGTTTNSSTPVQVSGLTD 842
Query: 287 -----------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 329
G ++TWG N G LG GS P +V G + V ++ G
Sbjct: 843 VIAVTARLYHTIALKSDGTVWTWGRNIYGQLGDGSTTERSLPVQVIG---LTDVIAIAGG 899
Query: 330 WKHTAAI-SEGKILTWGWGGSH 350
+ HT A+ S+G + WG+ G++
Sbjct: 900 YYHTIALKSDGAVWAWGYNGNN 921
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 132/280 (47%), Gaps = 41/280 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G++ +R P + + A+A G HT+ L G V+A G N +GQ
Sbjct: 1113 WGSNSYGQLGDGTITNRSIPTPVTYLTN--IIAIAGGYVHTIALKSDGTVWAWGYNGYGQ 1170
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+++SGL +V+ I+ Y H+ A+ DG ++ WG N GQLG G
Sbjct: 1171 LGDGSTTNRS-TPVQVSGL-TDVIAIAGEYVHTVALKSDGTVWAWGYNGYGQLGDGSTTN 1228
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V L+ + A G+ ++A+ G V +WG SG+LG G
Sbjct: 1229 RSTPV--QVSGLTDVI--AIAGGYVHTIALKSDGTVWTWGWNNSGQLGDG---------T 1275
Query: 223 STSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRA---------VDKMLF 272
+ + TP ++ G+ IA A G H+ + + V+ +G + ++++
Sbjct: 1276 TINRLTP---VQVSGLTDAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTTINRLTP 1332
Query: 273 QEGNHARRPSLISGGELYT-----------WGSNENGCLG 301
+ + I+GG+ +T WGSN G LG
Sbjct: 1333 VQVSGLTDAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLG 1372
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 155/345 (44%), Gaps = 55/345 (15%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
++ G HTL L G V+A G N QLG S P+++SGL + + I+ G +H+
Sbjct: 596 ISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDSS-TPVQVSGLT-DAIAIAGGVYHT 653
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ DG ++ WG N++GQLG G + P+ +V L+ + A G ++A+
Sbjct: 654 IALKSDGTVWTWGWNNSGQLGDGTTINRSTPV--QVIGLTDVI--AIAGGDYHTIALKSD 709
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG G+LG G +T+ TP +K L + A G++HS +
Sbjct: 710 GTVWTWGFNYYGQLGGGA---------TTNRSTPVQVKGLA--DIIAIAGGYVHSIALKS 758
Query: 256 NGRVYIFGDR--------------------AVDKMLFQEGNHARRPSLISGGELYTWGSN 295
+G V+ +G + ++ G + +L S G ++ WG N
Sbjct: 759 DGTVWAWGYNGYGQLGDGSTTDHLTPVQVSGLTDIIAIAGGYIHTIALKSDGTVWAWGHN 818
Query: 296 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFS 354
E G LG G+ +P +V G + V V+ HT A+ S+G + TW
Sbjct: 819 EGGQLGDGTTTNSSTPVQVSG---LTDVIAVTARLYHTIALKSDGTVWTW---------- 865
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G + GQLG G+ + P V +V A ++ G+ HT AL
Sbjct: 866 --GRNIYGQLGDGSTTERSLPVQVIGLTDVIA--IAGGYYHTIAL 906
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 153/348 (43%), Gaps = 55/348 (15%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
G+LG G+ +R PV S + A+A G HT+ L V+A G N +GQLG
Sbjct: 1069 GQLGDGTTINRSTPVQVSGLTD--VIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTI 1126
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
S+ P ++ L ++ I+ GY H+ A+ DG ++ WG N GQLG G + P+
Sbjct: 1127 TNRSI-PTPVTYL-TNIIAIAGGYVHTIALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQ 1184
Query: 169 TKVECLSGIFTKQAALG-FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
+SG+ A G + +VA+ G V +WG G G+LG G +T+
Sbjct: 1185 -----VSGLTDVIAIAGEYVHTVALKSDGTVWAWGYNGYGQLGDGS---------TTNRS 1230
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---------DRAVDKMLFQEGNHA 278
TP + L V A G++H+ + +G V+ +G ++++ + +
Sbjct: 1231 TPVQVSGL--TDVIAIAGGYVHTIALKSDGTVWTWGWNNSGQLGDGTTINRLTPVQVSGL 1288
Query: 279 RRPSLISGGELYT-----------WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
I+GG+ +T WGSN G LG G+ +P +V G + ++
Sbjct: 1289 TDAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTTINRLTPVQVSG---LTDAIAIA 1345
Query: 328 CGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
G HT A+ + W W G +S GQLG + + + P
Sbjct: 1346 GGDYHTIALKSDNTV-WAW----------GSNSYGQLGDVSTANSLTP 1382
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 129/294 (43%), Gaps = 53/294 (18%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
QIS G +H+ + DG ++ WG N NGQLG + P+ +V L+ + A G
Sbjct: 147 QISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRSTPV--QVSGLTDVI--AIAGGA 202
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
++A+ G V +WG G+LG G +T TP + L V A G
Sbjct: 203 YHTIALKSDGTVWAWGNNEGGQLGDGS---------TTDRSTPVQVSGL--TDVIAIAGG 251
Query: 247 FLHSACIDENGRVYIFGDR--------------------AVDKMLFQEGNHARRPSLISG 286
+ H+ + +G V+ +GD + ++ G +A +L S
Sbjct: 252 YAHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGLSDVIAIAGGNAHTIALKSD 311
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 345
G ++ WG NE G LG GS +P +V G + V ++ G+ HT + S+G + TW
Sbjct: 312 GTVWAWGDNEGGQLGDGSTTNRSTPVKVSG---LADVIAIAGGYSHTIVLRSDGTVWTW- 367
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
GH+ GGQLG G+ + P V+ +V A ++ G HT A+
Sbjct: 368 -----------GHNEGGQLGDGSTTNRSTPVQVSGLADVIA--IAGGVYHTIAV 408
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 184/450 (40%), Gaps = 103/450 (22%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ + G+LG GS +R PV S + A+A G HT+ + G ++A G N +GQ
Sbjct: 367 WGHNEGGQLGDGSTTNRSTPVQVSGLAD--VIAIAGGVYHTIAVKSDGTMWAWGYNWYGQ 424
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I S P++++GL +V+ I+ GY+H+ A+ DG ++ WG N GQLG G
Sbjct: 425 LGDGTTINSS-TPVQVNGLT-DVIAIAGGYYHTIAMKSDGAVWTWGFNYYGQLGDGSITN 482
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG---GKVLSWGAGGSGRLGHGQES---- 215
+ P + + + T G V+++ G V G + +G +
Sbjct: 483 RSTPAQRSLSGMKSVATPTVTTGSATCVSLSSALLNGWVNGNGVATTAWFDYGTSTGMYF 542
Query: 216 ----------------SILGFLRSTSEYTPRLIKELEG-----------VKVKIAAAGFL 248
+ LG L + Y R+ + G + +I+A +
Sbjct: 543 DATKTISCGTGSTYVGATLGDLTPWTTYYCRIASQNIGGIYYGSETTFMPRTQISAGAY- 601
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG--------------------GE 288
H+ + +G V+ +G ++ + P +SG G
Sbjct: 602 HTLTLKPDGTVWAYGANWNSQLGDGSTTDSSTPVQVSGLTDAIAIAGGVYHTIALKSDGT 661
Query: 289 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGW- 346
++TWG N +G LG G+ +P +V G + V ++ G HT A+ S+G + TWG+
Sbjct: 662 VWTWGWNNSGQLGDGTTINRSTPVQVIG---LTDVIAIAGGDYHTIALKSDGTVWTWGFN 718
Query: 347 -----GG--------------------------------SHGTFSEDGHSSGGQLGHGND 369
GG S GT G++ GQLG G+
Sbjct: 719 YYGQLGGGATTNRSTPVQVKGLADIIAIAGGYVHSIALKSDGTVWAWGYNGYGQLGDGST 778
Query: 370 VDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
D++ P V+ ++ A ++ G+ HT AL
Sbjct: 779 TDHLTPVQVSGLTDIIA--IAGGYIHTIAL 806
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 128/294 (43%), Gaps = 53/294 (18%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
QIS G +H+ + DG ++ G N NGQLG G + P+ +V L+ + A G
Sbjct: 1043 QISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRSTPV--QVSGLTDVI--AIAGGD 1098
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
++A+ V +WG+ G+LG G T+ P + L + A G
Sbjct: 1099 YHTIALKSDNTVWAWGSNSYGQLGDGTI---------TNRSIPTPVTYL--TNIIAIAGG 1147
Query: 247 FLHSACIDENGRVYIFG-------------DRA-------VDKMLFQEGNHARRPSLISG 286
++H+ + +G V+ +G +R+ + ++ G + +L S
Sbjct: 1148 YVHTIALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIAIAGEYVHTVALKSD 1207
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 345
G ++ WG N G LG GS +P +V G + V ++ G+ HT A+ S+G + TWG
Sbjct: 1208 GTVWAWGYNGYGQLGDGSTTNRSTPVQVSG---LTDVIAIAGGYVHTIALKSDGTVWTWG 1264
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
W S GQLG G ++ + P V A+ ++ G HT AL
Sbjct: 1265 WNNS------------GQLGDGTTINRLTP--VQVSGLTDAIAIAGGDYHTIAL 1304
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 124/296 (41%), Gaps = 55/296 (18%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA-AL 184
QIS G +H+ + DG ++ +G N N QLG G P+ +SG+ A A
Sbjct: 594 TQISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDSSTPVQ-----VSGLTDAIAIAG 648
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G ++A+ G V +WG SG+LG G + + TP + L V A
Sbjct: 649 GVYHTIALKSDGTVWTWGWNNSGQLGDG---------TTINRSTPVQVIGL--TDVIAIA 697
Query: 245 AGFLHSACIDENGRVYIFG--------------------DRAVDKMLFQEGNHARRPSLI 284
G H+ + +G V+ +G + + ++ G + +L
Sbjct: 698 GGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRSTPVQVKGLADIIAIAGGYVHSIALK 757
Query: 285 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILT 343
S G ++ WG N G LG GS +P +V G + + ++ G+ HT A+ S+G +
Sbjct: 758 SDGTVWAWGYNGYGQLGDGSTTDHLTPVQVSG---LTDIIAIAGGYIHTIALKSDGTVWA 814
Query: 344 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
W GH+ GGQLG G + P V+ +V A V+ HT AL
Sbjct: 815 W------------GHNEGGQLGDGTTTNSSTPVQVSGLTDVIA--VTARLYHTIAL 856
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 68/132 (51%), Gaps = 8/132 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ +R PV S A+A G HT+ L V+A G N +GQ
Sbjct: 1263 WGWNNSGQLGDGTTINRLTPVQVSGLTD--AIAIAGGDYHTIALKSDNTVWAWGSNSYGQ 1320
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I L P+++SGL + + I+ G +H+ A+ D ++ WG NS GQLG A
Sbjct: 1321 LGDGTTIN-RLTPVQVSGLT-DAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDVSTAN 1378
Query: 163 KVIPIPTKVECL 174
+ P +CL
Sbjct: 1379 SLTP----AQCL 1386
>gi|440898458|gb|ELR49953.1| RCC1 and BTB domain-containing protein 2, partial [Bos grunniens
mutus]
Length = 544
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ + P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 116 WGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 175
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++G K VV I+ G S A+ GE+++WG N NGQLGLG
Sbjct: 176 QVGSGSTANQPI-PRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGS 234
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 235 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 286
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y ++ E + + ++IAA H SA + G VY++G
Sbjct: 287 --KSNQSYPTPVVVEKDRI-IEIAACHSAHTSAAKTQGGHVYMWG 328
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 117/227 (51%), Gaps = 18/227 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
+ G G LGLG ++S P + + L+ G G H + T G V+ G N +
Sbjct: 62 VLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAY 121
Query: 101 GQLGI-SENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG + N G L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G
Sbjct: 122 SQLGNGTTNAG--LVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 179
Query: 158 GKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G A + PIP +V CL A G S+AV G+V WG G+G+LG G
Sbjct: 180 GSTANQ--PIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGS--- 234
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S ++ TP + L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 235 ------SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 275
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 139/318 (43%), Gaps = 56/318 (17%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVD 141
L+ T ++ G N G LG+ + + ++EP R+ L K++ +S G H T +
Sbjct: 52 LYTTVNDEIFVLGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTE 110
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
GE++ WG N+ QLG G A ++P LS + A G S+ +T G+V +W
Sbjct: 111 GEVFTWGHNAYSQLGNGTTNAGLVPYHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAW 169
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G SG++G G + ++ PR + + C+ V I
Sbjct: 170 GYNNSGQVGSGS---------TANQPIPRRV-----------------TGCLQSKVVVNI 203
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
A +M ++++ GE++ WG N NG LG+GS +P RV
Sbjct: 204 ----ACGQMC--------SMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRV-AALQGI 250
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
V +V+CG+ HT ++ EG++ W G +S GQLG GN + +PT V
Sbjct: 251 RVQRVACGYAHTLVLTDEGQVYAW------------GANSYGQLGTGNKSNQSYPTPVVV 298
Query: 381 GENVKALQVSCGFNHTGA 398
++ +C HT A
Sbjct: 299 EKDRIIEIAACHSAHTSA 316
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 114/268 (42%), Gaps = 60/268 (22%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ LSG K A L + V T
Sbjct: 55 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIACLSYGSGPHIVLATTE 110
Query: 196 GKVLSWGAGGSGRLGHGQESS-ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G+V +WG +LG+G ++ ++ + ST+ ++I+ A G HS
Sbjct: 111 GEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIE---------VACGSYHSLV-- 159
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
L S GE++ WG N +G +G GS P RV
Sbjct: 160 ----------------------------LTSDGEVFAWGYNNSGQVGSGSTANQPIPRRV 191
Query: 315 QGPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
G V ++CG + A ++ G++ WG+ G+ GQLG G+ +
Sbjct: 192 TGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGN------------GQLGLGSSGNQP 239
Query: 374 HPTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 240 TPCRVAALQGIRVQRVACGYAHTLVLTD 267
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 221 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 280
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
QLG S P + K +++I+ + H S+A T G +YMWG+
Sbjct: 281 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ 329
>gi|300794901|ref|NP_001179920.1| RCC1 and BTB domain-containing protein 2 [Bos taurus]
gi|296481887|tpg|DAA24002.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
domain containing protein 2 [Bos taurus]
Length = 527
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ + P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 99 WGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++G K VV I+ G S A+ GE+++WG N NGQLGLG
Sbjct: 159 QVGSGSTANQPI-PRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGS 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 218 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 269
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y ++ E + + ++IAA H SA + G VY++G
Sbjct: 270 --KSNQSYPTPVVVEKDRI-IEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 115/220 (52%), Gaps = 18/220 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-S 106
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT 111
Query: 107 ENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV 164
N G L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 112 TNAG--LVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ- 168
Query: 165 IPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 169 -PIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGS---------S 218
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++ TP + L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 219 GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 139/318 (43%), Gaps = 56/318 (17%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVD 141
L+ T ++ G N G LG+ + + ++EP R+ L K++ +S G H T +
Sbjct: 35 LYTTVNDEIFVLGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTE 93
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
GE++ WG N+ QLG G A ++P LS + A G S+ +T G+V +W
Sbjct: 94 GEVFTWGHNAYSQLGNGTTNAGLVPYHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAW 152
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G SG++G G + ++ PR + + C+ V I
Sbjct: 153 GYNNSGQVGSGS---------TANQPIPRRV-----------------TGCLQSKVVVNI 186
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
A +M ++++ GE++ WG N NG LG+GS +P RV
Sbjct: 187 ----ACGQMC--------SMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRV-AALQGI 233
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
V +V+CG+ HT ++ EG++ W G +S GQLG GN + +PT V
Sbjct: 234 RVQRVACGYAHTLVLTDEGQVYAW------------GANSYGQLGTGNKSNQSYPTPVVV 281
Query: 381 GENVKALQVSCGFNHTGA 398
++ +C HT A
Sbjct: 282 EKDRIIEIAACHSAHTSA 299
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 114/268 (42%), Gaps = 60/268 (22%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ LSG K A L + V T
Sbjct: 38 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIACLSYGSGPHIVLATTE 93
Query: 196 GKVLSWGAGGSGRLGHGQESS-ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G+V +WG +LG+G ++ ++ + ST+ ++I+ A G HS
Sbjct: 94 GEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIE---------VACGSYHSLV-- 142
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
L S GE++ WG N +G +G GS P RV
Sbjct: 143 ----------------------------LTSDGEVFAWGYNNSGQVGSGSTANQPIPRRV 174
Query: 315 QGPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
G V ++CG + A ++ G++ WG+ G+ GQLG G+ +
Sbjct: 175 TGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGN------------GQLGLGSSGNQP 222
Query: 374 HPTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 223 TPCRVAALQGIRVQRVACGYAHTLVLTD 250
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
QLG S P + K +++I+ + H S+A T G +YMWG+
Sbjct: 264 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ 312
>gi|259089405|ref|NP_001158608.1| probable E3 ubiquitin-protein ligase HERC6 isoform 2 [Homo sapiens]
gi|55832764|gb|AAV66895.1| HERC6 splice variant [Homo sapiens]
Length = 986
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 141/309 (45%), Gaps = 42/309 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
L+ ER+ G V Q+ CG HT A + G+
Sbjct: 281 LV---------------------------ERIDG-----LVSQIDCGSYHTLAYVHTTGQ 308
Query: 341 ILTWGWGGS 349
++++G G S
Sbjct: 309 VVSFGHGPS 317
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 123/282 (43%), Gaps = 56/282 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L +K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G HS + ++ +V ++WG N +G LG+G
Sbjct: 134 SCGHYHSLALSKDSQV------------------------------FSWGKNSHGQLGLG 163
Query: 304 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
SP+RV+ P+ QV+ G H+ A+S ++GWG +S G
Sbjct: 164 KEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLCGT-SFGWGS----------NSAG 211
Query: 363 QL---GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QL G V P V +N+ + +SCG HT L +
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQ 253
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ +I + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ G + G N G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAG 211
Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N+ S +PL + LK VV IS G H++ +T DG+++ +G N +GQLG
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
K P VE + G+ ++ + V G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317
>gi|193785714|dbj|BAG51149.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + + P R++G K VV I+ G A+ GE+Y+WG N NGQLGLG
Sbjct: 183 QVGSGSTVNQPI-PRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN 241
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 242 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 293
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y + E + + ++IAA H SA + G VY++G
Sbjct: 294 --KSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 114/226 (50%), Gaps = 16/226 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
+ G G LGLG ++S P + + L+ G G H + T G V+ G N +
Sbjct: 69 VLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAY 128
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG + + L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G
Sbjct: 129 SQLG-NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSG 187
Query: 159 KKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ PIP +V CL A G +AV G+V WG G+G+LG G
Sbjct: 188 STVNQ--PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG----- 240
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S ++ TP + L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 241 ----NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 154/368 (41%), Gaps = 67/368 (18%)
Query: 45 NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
+GD G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 9 SGDSGKPVQATLSSLKKLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
G N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+
Sbjct: 69 VLGTNCCGCLGLGD-VQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNA 127
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QLG G ++P LS + A G S+ +T G+V +WG SG++G
Sbjct: 128 YSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G + ++ PR + + C+ V I A +M
Sbjct: 187 GS---------TVNQPIPRRV-----------------TGCLQNKVVVTI----ACGQMC 216
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 331
+++ GE+Y WG N NG LG+G+ +P RV V +V+CG+
Sbjct: 217 CM--------AVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRV-AALQGIRVQRVACGYA 267
Query: 332 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 390
HT ++ EG++ WG +S GQLG GN + +PT V ++ +
Sbjct: 268 HTLVLTDEGQVYAWG------------ANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 315
Query: 391 CGFNHTGA 398
C HT A
Sbjct: 316 CHSTHTSA 323
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCADDVF 357
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 110/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ L+G K A L + V T
Sbjct: 62 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLNG--KKIACLSYGSGPHIVLATTE 117
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSL---- 165
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 166 --------------------------VLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG A+ + G++ WG+ G+ GQLG GN +
Sbjct: 200 GCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLGLGNSGNQPT 247
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTD 274
>gi|456888932|gb|EMF99869.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii str. 200701203]
Length = 482
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 137/322 (42%), Gaps = 61/322 (18%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WGN G+LG+G+ + R P + + A G H L L G V
Sbjct: 178 WGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMGAY--GFNHALILKSDGTV 235
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG N +S++P+ + GL +V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 236 VAFGQNNVGQLGNGANDLNADSFSMDPVAVVGLS-DVIQVIAGSEHSAALTENGEVYVWG 294
Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G+ +A + P KVE LSGI KQ A G + +A+ G++ SWG S
Sbjct: 295 RNQYGNLGNGRLSAANAIQSTPVKVEGLSGI--KQIANGRDHILALASNGRIYSWGLNAS 352
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG G S TP + L AG S I +N
Sbjct: 353 GQLGIGGNGS--------PNPTPNPTQILNITNASSVWAGGTQSFSILKN---------- 394
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGC-LGIGSIDVLHSPERVQGPFSESPVDQ 325
GE+ WG+N N L IG + L E + V
Sbjct: 395 --------------------GEVKGWGANGNTANLAIGETNTLKVYEPNKAVVGIDNVIH 434
Query: 326 VSCGWKHT-AAISEGKILTWGW 346
CG H A + +G+I WGW
Sbjct: 435 FGCGATHNFALLGDGEIYGWGW 456
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 148/364 (40%), Gaps = 63/364 (17%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
L+ GGAH+ FL + G VY G N+FGQLG + G + + + I ++
Sbjct: 107 LSAGGAHSGFL-KNGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNN 165
Query: 135 SSAITVDGELYMWGKNSNGQLGLGK--------KAAKVIPIPTKVECLSGIFTKQAALGF 186
S AI +G +Y WG N+ GQLG+G +AA PT V ++ A GF
Sbjct: 166 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAV--MGAYGF 223
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAAA 245
++ + G V+++G G+LG+G L + S P + L V I A
Sbjct: 224 NHALILKSDGTVVAFGQNNVGQLGNGAND-----LNADSFSMDPVAVVGLSDVIQVI--A 276
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRP-------------------- 281
G HSA + ENG VY++G + L P
Sbjct: 277 GSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSGIKQIANGRDHIL 336
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW----KHTAAIS 337
+L S G +Y+WG N +G LGIG SP P + S W + + +
Sbjct: 337 ALASNGRIYSWGLNASGQLGIGGNG---SPNPTPNPTQILNITNASSVWAGGTQSFSILK 393
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG-ENVKALQVSCGFNHT 396
G++ WG +G+++ +G N + P G +NV + CG H
Sbjct: 394 NGEVKGWG---------ANGNTANLAIGETNTLKVYEPNKAVVGIDNV--IHFGCGATHN 442
Query: 397 GALL 400
ALL
Sbjct: 443 FALL 446
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 73/177 (41%), Gaps = 11/177 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G L + + PV +K +A G H L L G +Y+ GL
Sbjct: 292 VWGRNQYGNLGNGRLSAANAIQSTPVKVEGLS--GIKQIANGRDHILALASNGRIYSWGL 349
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N + P L + G S +I +GE+ WG N N L
Sbjct: 350 NASGQLGIGGNGSPNPTPNPTQILNITNASSVWAGGTQSFSILKNGEVKGWGANGNTANL 409
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+G+ + P K + GI G + A+ G G++ WG G LG
Sbjct: 410 AIGETNTLKVYEPNK--AVVGIDNVIHFGCGATHNFALLGDGEIYGWGWNFKGSLGR 464
>gi|8131934|gb|AAF73143.1|AF148800_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 918
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 161/358 (44%), Gaps = 57/358 (15%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL TE G VYA G N+ G
Sbjct: 58 MFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEG 117
Query: 102 QLGISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + S + ++++ Q+S G + S+A+T DGEL+MWG NS GQ+GL
Sbjct: 118 QLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENV 177
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+P V G + G+ S VT G++ ++G G+LG + +
Sbjct: 178 TNVCVPQQVTV----GKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLV--- 230
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ P+ + + G V++A G G + ++AV
Sbjct: 231 ----NHRMPQPVPGIPGKVVQVACGG----------GHTVVLTEKAV------------- 263
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-G 339
YT+G + G LG+G+ S + + + ++CG HTA I++ G
Sbjct: 264 ---------YTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMG 314
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCGFNHT 396
+ T+G G HG LG N + PT+ NF + L VSCG HT
Sbjct: 315 LMYTFG-DGRHGKLG---------LGLENSTNQFIPTLCSNFLRFIVQL-VSCGGCHT 361
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 146/325 (44%), Gaps = 52/325 (16%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + +S G H++ +T + +LYM+G N+ GQLGLG
Sbjct: 17 FGKTQFAENI-----PSKFWFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGS 71
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K+ + PT V+ L K AA G ++ T GGKV + G G+LG G
Sbjct: 72 KS--TVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERST 129
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F + + R IK+L +AG SA + E+G ++++GD + ++ + +
Sbjct: 130 FHLISFFTSQRKIKQL--------SAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVC 181
Query: 280 RPSLI--------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
P + + G+LYT+G E G LG+ + +++ R+ P
Sbjct: 182 VPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNH--RMPQPVP 239
Query: 320 ESP--VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPT 376
P V QV+CG HT ++E + T+G G GQLG G + + P
Sbjct: 240 GIPGKVVQVACGGGHTVVLTEKAVYTFGLG------------QFGQLGLGTFLFETSVPK 287
Query: 377 IVNFGENVKALQVSCGFNHTGALLE 401
+ ++ K ++CG NHT + +
Sbjct: 288 AIEHIKDQKISFIACGENHTALITD 312
>gi|55730398|emb|CAH91921.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 99 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + + P R++G K VV I+ G A+ GE+Y+WG N NGQLGLG
Sbjct: 159 QVGSGSTVNQPI-PRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 218 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 269
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y + E + + ++IAA H SA + G VY++G
Sbjct: 270 --KSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 16/219 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG + S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGLGDVRSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 111 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 168
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 169 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN---------SG 219
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++ TP + L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 220 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 146/347 (42%), Gaps = 60/347 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VRSTIE 64
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 65 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 125 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPIPRRV 174
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW 292
+ C+ V I A +M +++ GE+Y W
Sbjct: 175 -----------------TGCLQNKVVVTI----ACGQMCCM--------AVVDTGEVYVW 205
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 351
G N NG LG+G+ +P RV V +V+CG+ HT ++ EG++ WG
Sbjct: 206 GYNGNGQLGLGNSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWG------ 258
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 259 ------ANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA 299
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 264 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 --SVILPHLTHFSCTDDVF 333
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 92/234 (39%), Gaps = 46/234 (19%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
T ++ G G LG LG +RST E PR + L G K+ + G H
Sbjct: 38 TVNDEIFVLGTNCCGCLG-------LGDVRSTIE--PRRLDSLNGKKIACLSYGSGPHIV 88
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPS-----------------------LISGGE 288
G V+ +G A ++ NH P L S GE
Sbjct: 89 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 148
Query: 289 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 347
++ WG N +G +G GS P RV G V ++CG A+ + G++ WG+
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 208
Query: 348 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G+ GQLG GN + P V + ++ +V+CG+ HT L +
Sbjct: 209 GN------------GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD 250
>gi|410208768|gb|JAA01603.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410264078|gb|JAA20005.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410293804|gb|JAA25502.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410338541|gb|JAA38217.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
Length = 527
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 139/300 (46%), Gaps = 47/300 (15%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P P
Sbjct: 114 QGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
TP V++AA LHS C+++ + G +A +L G
Sbjct: 223 TP----------VRVAA---LHSVCVNQ----IVCG-------------YAHTLALTDEG 252
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 345
LY WG+N G LG G+ + L SP + E V+ +C HT+A G + WG
Sbjct: 253 LLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 137/312 (43%), Gaps = 51/312 (16%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 GLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V A G HS + +G V+ +G ++ G+ A +P+
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV S V+Q+
Sbjct: 180 IKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG ++ GQLG GN + + P + +
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHIMVEKERVV 287
Query: 387 LQVSCGFNHTGA 398
+C HT A
Sbjct: 288 EIAACHSAHTSA 299
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Macaca mulatta]
Length = 519
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + + P R++G K VV I+ G A+ GE+Y+WG N NGQLGLG
Sbjct: 183 QVGSGSTVNQPI-PRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGS 241
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 242 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 293
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y + E + + ++IAA H SA + G VY++G
Sbjct: 294 --KSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 115/224 (51%), Gaps = 16/224 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQ 102
G G LGLG ++S P + + +L+ G G H + T G V+ G N + Q
Sbjct: 71 GTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQ 130
Query: 103 LGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + L P +IS K+V++++ G +HS +T DGE++ WG N++GQ+G G
Sbjct: 131 LG-NGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGST 189
Query: 161 AAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ PIP +V CL A G +AV G+V WG G+G+LG G
Sbjct: 190 VNQ--PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGS------ 241
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S ++ TP + L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 242 ---SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 154/368 (41%), Gaps = 67/368 (18%)
Query: 45 NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
+GD G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 9 SGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
G N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+
Sbjct: 69 VLGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNA 127
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QLG G ++P LS + A G S+ +T G+V +WG SG++G
Sbjct: 128 YSQLGNGTTNHGLVPCQISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G + ++ PR + + C+ V I A +M
Sbjct: 187 GS---------TVNQPIPRRV-----------------TGCLQNKVVVTI----ACGQMC 216
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 331
+++ GE+Y WG N NG LG+GS +P RV V +V+CG+
Sbjct: 217 CM--------AVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGYA 267
Query: 332 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 390
HT ++ EG++ WG +S GQLG GN + +PT V ++ +
Sbjct: 268 HTLVLTDEGQVYAWG------------ANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 315
Query: 391 CGFNHTGA 398
C HT A
Sbjct: 316 CHSTHTSA 323
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 112/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ LSG K A+L + V T
Sbjct: 62 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIASLSYGSGPHIVLATTE 117
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L + ++ + + + E+ A G HS
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEV--------ACGSYHSLV--- 166
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 167 ---------------------------LTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG A+ + G++ WG+ G+ GQLG G+ +
Sbjct: 200 GCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLGLGSSGNQPT 247
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTD 274
>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
[Gorilla gorilla gorilla]
Length = 527
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 99 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + + P R++G K VV I+ G A+ GE+Y+WG N NGQLGLG
Sbjct: 159 QVGSGSTVNQPI-PRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 218 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 269
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y + E + + ++IAA H SA + G VY++G
Sbjct: 270 --KSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 112/219 (51%), Gaps = 16/219 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 111 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 168
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 169 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN---------SG 219
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++ TP + L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 220 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 146/347 (42%), Gaps = 60/347 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 64
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 65 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 125 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPIPRRV 174
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW 292
+ C+ V I A +M +++ GE+Y W
Sbjct: 175 -----------------TGCLQNKVVVTI----ACGQMCCM--------AVVDTGEVYVW 205
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 351
G N NG LG+G+ +P RV V +V+CG+ HT ++ EG++ WG
Sbjct: 206 GYNGNGQLGLGNSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWG------ 258
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 259 ------ANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA 299
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 264 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 --SVILPHLTHFSCTDDVF 333
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 110/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ L+G K A L + V T
Sbjct: 38 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLNG--KKIACLSYGSGPHIVLATTE 93
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 94 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSL---- 141
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 142 --------------------------VLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 175
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG A+ + G++ WG+ G+ GQLG GN +
Sbjct: 176 GCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLGLGNSGNQPT 223
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 224 PCRVAALQGIRVQRVACGYAHTLVLTD 250
>gi|73988984|ref|XP_542558.2| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Canis lupus familiaris]
Length = 531
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 139/301 (46%), Gaps = 49/301 (16%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
TP V++AA LHS C+++ + G +A +L
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ----IVCG-------------YAHTLALTDE 251
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTW 344
G LY WG+N G LG G+ + L SP + E V+ +C HT+A G + W
Sbjct: 252 GLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMW 310
Query: 345 G 345
G
Sbjct: 311 G 311
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 137/315 (43%), Gaps = 57/315 (18%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFG-----------------DRAVDKMLFQE 274
IK++ V A G HS + +G V+ +G R V L
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCL--- 178
Query: 275 GNHARRP-----------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
H +R +++ GE+Y WG N NG LG+G+ +P RV S V
Sbjct: 179 --HIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-V 235
Query: 324 DQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 383
+Q+ CG+ HT A+++ +L + WG ++ GQLG GN + + P + +
Sbjct: 236 NQIVCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHIMVEKE 284
Query: 384 VKALQVSCGFNHTGA 398
+C HT A
Sbjct: 285 RVVEIAACHSAHTSA 299
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 317 -SVVLPHLTHFSCTDDVF 333
>gi|207080016|ref|NP_001128757.1| RCC1 and BTB domain-containing protein 2 isoform 2 [Pongo abelii]
gi|55726291|emb|CAH89917.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 99 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + + P R++G K VV I+ G A+ GE+Y+WG N NGQLGLG
Sbjct: 159 QVGSGSTVNQPI-PRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 218 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 269
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y + E + + ++IAA H SA + G VY++G
Sbjct: 270 --KSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 112/219 (51%), Gaps = 16/219 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 111 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 168
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 169 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN---------SG 219
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++ TP + L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 220 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 146/347 (42%), Gaps = 60/347 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 64
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 65 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 125 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPIPRRV 174
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW 292
+ C+ V I A +M +++ GE+Y W
Sbjct: 175 -----------------TGCLQNKVVVTI----ACGQMCCM--------AVVDTGEVYVW 205
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 351
G N NG LG+G+ +P RV V +V+CG+ HT ++ EG++ WG
Sbjct: 206 GYNGNGQLGLGNSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWG------ 258
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 259 ------ANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA 299
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 264 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 --SVILPHLTHFSCTDDVF 333
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 110/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ L+G K A L + V T
Sbjct: 38 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLNG--KKIACLSYGSGPHIVLATTE 93
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 94 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSL---- 141
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 142 --------------------------VLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 175
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG A+ + G++ WG+ G+ GQLG GN +
Sbjct: 176 GCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLGLGNSGNQPT 223
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 224 PCRVAALQGIRVQRVACGYAHTLVLTD 250
>gi|418719204|ref|ZP_13278404.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii str. UI 09149]
gi|421094338|ref|ZP_15555056.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii str. 200801926]
gi|410362760|gb|EKP13795.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii str. 200801926]
gi|410744357|gb|EKQ93098.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii str. UI 09149]
Length = 506
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 137/322 (42%), Gaps = 61/322 (18%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WGN G+LG+G+ + R P + + A G H L L G V
Sbjct: 202 WGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMGAY--GFNHALILKSDGTV 259
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG N +S++P+ + GL +V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGANDLNADSFSMDPVAVVGLS-DVIQVIAGSEHSAALTENGEVYVWG 318
Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G+ +A + P KVE LSGI KQ A G + +A+ G++ SWG S
Sbjct: 319 RNQYGNLGNGRLSAANAIQSTPVKVEGLSGI--KQIANGRDHILALASNGRIYSWGLNAS 376
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG G S TP + L AG S I +N
Sbjct: 377 GQLGIGGNGS--------PNPTPNPTQILNITNASSVWAGGTQSFSILKN---------- 418
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGC-LGIGSIDVLHSPERVQGPFSESPVDQ 325
GE+ WG+N N L IG + L E + V
Sbjct: 419 --------------------GEVKGWGANGNTANLAIGETNTLKVYEPNKAVVGIDNVIH 458
Query: 326 VSCGWKHT-AAISEGKILTWGW 346
CG H A + +G+I WGW
Sbjct: 459 FGCGATHNFALLGDGEIYGWGW 480
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 148/364 (40%), Gaps = 63/364 (17%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
L+ GGAH+ FL + G VY G N+FGQLG + G + + + I ++
Sbjct: 131 LSAGGAHSGFL-KNGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNN 189
Query: 135 SSAITVDGELYMWGKNSNGQLGLGK--------KAAKVIPIPTKVECLSGIFTKQAALGF 186
S AI +G +Y WG N+ GQLG+G +AA PT V ++ A GF
Sbjct: 190 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAV--MGAYGF 247
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAAA 245
++ + G V+++G G+LG+G L + S P + L V I A
Sbjct: 248 NHALILKSDGTVVAFGQNNVGQLGNGAND-----LNADSFSMDPVAVVGLSDVIQVI--A 300
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRP-------------------- 281
G HSA + ENG VY++G + L P
Sbjct: 301 GSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSGIKQIANGRDHIL 360
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW----KHTAAIS 337
+L S G +Y+WG N +G LGIG SP P + S W + + +
Sbjct: 361 ALASNGRIYSWGLNASGQLGIGGNG---SPNPTPNPTQILNITNASSVWAGGTQSFSILK 417
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG-ENVKALQVSCGFNHT 396
G++ WG +G+++ +G N + P G +NV + CG H
Sbjct: 418 NGEVKGWG---------ANGNTANLAIGETNTLKVYEPNKAVVGIDNV--IHFGCGATHN 466
Query: 397 GALL 400
ALL
Sbjct: 467 FALL 470
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 73/177 (41%), Gaps = 11/177 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G L + + PV +K +A G H L L G +Y+ GL
Sbjct: 316 VWGRNQYGNLGNGRLSAANAIQSTPVKVEGLS--GIKQIANGRDHILALASNGRIYSWGL 373
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N + P L + G S +I +GE+ WG N N L
Sbjct: 374 NASGQLGIGGNGSPNPTPNPTQILNITNASSVWAGGTQSFSILKNGEVKGWGANGNTANL 433
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+G+ + P K + GI G + A+ G G++ WG G LG
Sbjct: 434 AIGETNTLKVYEPNK--AVVGIDNVIHFGCGATHNFALLGDGEIYGWGWNFKGSLGR 488
>gi|383851572|ref|XP_003701306.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Megachile rotundata]
Length = 864
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 173/366 (47%), Gaps = 68/366 (18%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ D+G+LGLG +P + + +ACG AHTL T ++A G + G
Sbjct: 130 VFGSNDWGQLGLGHRNHISKPSCVKVLKPEKVTHVACGRAHTLISTGAQKIFACGSDQEG 189
Query: 102 QLGI-SENIG-YSLEPLRI--SGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
QLG + IG S P+ + +GL +++Q++ G HHS A+ DG ++ WG N GQLG
Sbjct: 190 QLGRGTSAIGDSSSSPVLVYDAGLAGSKILQLAAGSHHSLALISDGGVFAWGSNLEGQLG 249
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
L + ++ PTKV + KQ + G+ S +T G V G SG+LG
Sbjct: 250 L-PDVSGLVNKPTKVHIPEPV--KQISAGYYHSAFLTESGLVYICGESESGKLGID---- 302
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ F +++ TP+ + +L V +A G H+ + ENG +Y
Sbjct: 303 -VNF---STQITPKQM-QLPSPAVHVACGGH-HTVVLAENGNIYC--------------- 341
Query: 277 HARRPSLISGGELYTWGSNENGCLGIGS-IDVLHSPERV-QGPFSESPVDQVSCGWKHTA 334
GSN NG LG+G+ + LH+P+ + +G + ++SCG HTA
Sbjct: 342 ---------------TGSNSNGQLGLGTNVTELHTPKLLSRGMLQNETISRISCGESHTA 386
Query: 335 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL---QVS 390
++E GK+ T G G H G+LG + + +H + F + K L +V+
Sbjct: 387 IVTESGKLFTCG-DGRH-----------GKLGLEENENNVHE--LTFVQRYKELFVSKVA 432
Query: 391 CGFNHT 396
CG HT
Sbjct: 433 CGGCHT 438
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 153/348 (43%), Gaps = 59/348 (16%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
A L E+G V+ G + F I+ + +P VV I+ G HS+ I
Sbjct: 75 ADVSVLKESGAVFTVGRSRFAD-NIASHFFIRKDP---------VVSITCGDEHSAVICQ 124
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G L+++G N GQLGLG + I P+ V+ L A G ++ TG K+ +
Sbjct: 125 SGRLFVFGSNDWGQLGLGHRNH--ISKPSCVKVLKPEKVTHVACGRAHTLISTGAQKIFA 182
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE--LEGVKVKIAAAGFLHSACIDENGR 258
G+ G+LG G +S +G S +P L+ + L G K+ AAG HS + +G
Sbjct: 183 CGSDQEGQLGRG--TSAIG----DSSSSPVLVYDAGLAGSKILQLAAGSHHSLALISDGG 236
Query: 259 VYIFGDRAVDKM-------LFQEGNHARRPS--------------LISGGELYTWGSNEN 297
V+ +G ++ L + P L G +Y G +E+
Sbjct: 237 VFAWGSNLEGQLGLPDVSGLVNKPTKVHIPEPVKQISAGYYHSAFLTESGLVYICGESES 296
Query: 298 GCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 356
G LGI + +P+++Q P SP V+CG HT ++E +G
Sbjct: 297 GKLGIDVNFSTQITPKQMQLP---SPAVHVACGGHHTVVLAE-----------NGNIYCT 342
Query: 357 GHSSGGQLGHGNDVDYIH-PTIVNFG--ENVKALQVSCGFNHTGALLE 401
G +S GQLG G +V +H P +++ G +N ++SCG +HT + E
Sbjct: 343 GSNSNGQLGLGTNVTELHTPKLLSRGMLQNETISRISCGESHTAIVTE 390
>gi|301791658|ref|XP_002930797.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
[Ailuropoda melanoleuca]
Length = 348
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 139/301 (46%), Gaps = 49/301 (16%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
TP V++AA LHS C+++ + G +A +L
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ----IVCG-------------YAHTLALTDE 251
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTW 344
G LY WG+N G LG G+ + L SP + E V+ +C HT+A G + W
Sbjct: 252 GLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMW 310
Query: 345 G 345
G
Sbjct: 311 G 311
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 115/226 (50%), Gaps = 16/226 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL- 274
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFGD 264
+P I + V+IAA H SA + G VY++G
Sbjct: 275 --------SPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 137/315 (43%), Gaps = 57/315 (18%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEITSIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFG-----------------DRAVDKMLFQE 274
IK++ V A G HS + +G V+ +G R V L
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCL--- 178
Query: 275 GNHARRP-----------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
H +R +++ GE+Y WG N NG LG+G+ +P RV S V
Sbjct: 179 --HIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-V 235
Query: 324 DQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 383
+Q+ CG+ HT A+++ +L + WG ++ GQLG GN + + P + +
Sbjct: 236 NQIVCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHIMVEKE 284
Query: 384 VKALQVSCGFNHTGA 398
+C HT A
Sbjct: 285 RVVEIAACHSAHTSA 299
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 317 -SVVLPHLTHFSCTDDVF 333
>gi|414878660|tpg|DAA55791.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 964
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 154/350 (44%), Gaps = 72/350 (20%)
Query: 67 AFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDFGQLGISENIGYSLEPLRISGLKK- 123
A +++ +ACG HT +T +G +Y G FG LG ++ + + P ++G +
Sbjct: 231 ALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWV-PKHVNGPLEG 289
Query: 124 -EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
V IS G H++ +T G+L+ +G S G LG G + + I +P +VE L G+ T +A
Sbjct: 290 IHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRES--ISVPREVESLKGLRTVRA 347
Query: 183 ALGFEQSVAVT------------GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
A G + AV GK+ +WG G GRLGHG + P+
Sbjct: 348 ACGVWHTAAVVEVMSVNSNSSNCSSGKIFTWGDGDKGRLGHGDKE-------------PK 394
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
L+ V+ F AC H +L + G +Y
Sbjct: 395 LVPTCVAALVE---PNFCQVAC-----------------------GHCLTVALTTSGHVY 428
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGS 349
T GS G LG D + P RV+G ++ V+++SCG H A + S ++ TWG G +
Sbjct: 429 TMGSAVYGQLGNAQADGM-LPVRVEGKLYKNFVEEISCGAYHVAVLTSRTEVYTWGKGAN 487
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G+LGHG+ D PT+V ++ + V CG N T A+
Sbjct: 488 ------------GRLGHGDTEDKNTPTLVEALKDKQVRNVVCGINFTAAI 525
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G E + P +A + + +ACG T+ LT +G VY G +GQ
Sbjct: 378 WGDGDKGRLGHGDKEPKLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQ 437
Query: 103 LGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG ++ G + P+R+ G K V +IS G +H + +T E+Y WGK +NG+LG G
Sbjct: 438 LGNAQADG--MLPVRVEGKLYKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDT 495
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
K PT VE L + G + A+
Sbjct: 496 EDKN--TPTLVEALKDKQVRNVVCGINFTAAI 525
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 129/311 (41%), Gaps = 61/311 (19%)
Query: 43 WGNG--DYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+G +G LG G+ S W P V E + +++CG HT +T G ++ G
Sbjct: 259 WGDGTFKFGLLGHGNDVSHWVPKHVNGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGS 318
Query: 100 FGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT------------VDGELY 145
FG L G E+I E + GL+ V+ + G H++A+ G+++
Sbjct: 319 FGVLGHGDRESISVPREVESLKGLR--TVRAACGVWHTAAVVEVMSVNSNSSNCSSGKIF 376
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
WG G+LG G K K+ +PT V L Q A G +VA+T G V + G+
Sbjct: 377 TWGDGDKGRLGHGDKEPKL--VPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAV 434
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LG+ Q +L +R + ++E+ + G H A
Sbjct: 435 YGQLGNAQADGMLP-VRVEGKLYKNFVEEI--------SCGAYHVAV------------- 472
Query: 266 AVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 325
L S E+YTWG NG LG G + ++P V+ + V
Sbjct: 473 -----------------LTSRTEVYTWGKGANGRLGHGDTEDKNTPTLVEA-LKDKQVRN 514
Query: 326 VSCGWKHTAAI 336
V CG TAAI
Sbjct: 515 VVCGINFTAAI 525
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 62/121 (51%), Gaps = 17/121 (14%)
Query: 287 GELYTWGSN--ENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 342
G+LYTWG + G LG G+ DV H P+ V GP V +SCG HTA + S G++
Sbjct: 254 GDLYTWGDGTFKFGLLGHGN-DVSHWVPKHVNGPLEGIHVSSISCGPWHTALVTSAGQLF 312
Query: 343 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 402
T+G G S G LGHG+ P V + ++ ++ +CG HT A++E
Sbjct: 313 TFGDG------------SFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAVVEV 360
Query: 403 V 403
+
Sbjct: 361 M 361
>gi|397480406|ref|XP_003811475.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2 [Pan
paniscus]
gi|426375451|ref|XP_004054552.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 3
[Gorilla gorilla gorilla]
gi|194376922|dbj|BAG63022.1| unnamed protein product [Homo sapiens]
Length = 556
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 187
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + + P R++G K VV I+ G A+ GE+Y+WG N NGQLGLG
Sbjct: 188 QVGSGSTVNQPI-PRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN 246
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 247 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 298
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y + E + + ++IAA H SA + G VY++G
Sbjct: 299 --KSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 340
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 114/226 (50%), Gaps = 16/226 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
+ G G LGLG ++S P + + L+ G G H + T G V+ G N +
Sbjct: 74 VLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAY 133
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG + + L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G
Sbjct: 134 SQLG-NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSG 192
Query: 159 KKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ PIP +V CL A G +AV G+V WG G+G+LG G
Sbjct: 193 STVNQ--PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN---- 246
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S ++ TP + L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 247 -----SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 146/347 (42%), Gaps = 60/347 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 35 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 93
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 94 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 153
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 154 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPIPRRV 203
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW 292
+ C+ V I A +M +++ GE+Y W
Sbjct: 204 -----------------TGCLQNKVVVTI----ACGQMCCM--------AVVDTGEVYVW 234
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 351
G N NG LG+G+ +P RV V +V+CG+ HT ++ EG++ WG
Sbjct: 235 GYNGNGQLGLGNSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWG------ 287
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 288 ------ANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA 328
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 233 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 292
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 293 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 345
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 346 --SVILPHLTHFSCTDDVF 362
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 110/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ L+G K A L + V T
Sbjct: 67 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLNG--KKIACLSYGSGPHIVLATTE 122
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 123 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSL---- 170
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 171 --------------------------VLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 204
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG A+ + G++ WG+ G+ GQLG GN +
Sbjct: 205 GCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLGLGNSGNQPT 252
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 253 PCRVAALQGIRVQRVACGYAHTLVLTD 279
>gi|61563742|ref|NP_060382.3| probable E3 ubiquitin-protein ligase HERC6 isoform 1 [Homo sapiens]
gi|74750679|sp|Q8IVU3.2|HERC6_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC6; AltName:
Full=HECT domain and RCC1-like domain-containing protein
6
gi|48686728|gb|AAQ14893.1|AF336798_1 HERC6 [Homo sapiens]
gi|66840150|gb|AAH42047.2| Hect domain and RLD 6 [Homo sapiens]
gi|194381386|dbj|BAG58647.1| unnamed protein product [Homo sapiens]
Length = 1022
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 140/309 (45%), Gaps = 42/309 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L + G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA------LSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
L+ ER+ G V Q+ CG HT A + G+
Sbjct: 281 LV---------------------------ERIDG-----LVSQIDCGSYHTLAYVHTTGQ 308
Query: 341 ILTWGWGGS 349
++++G G S
Sbjct: 309 VVSFGHGPS 317
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 123/282 (43%), Gaps = 56/282 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L +K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G HS + ++ +V ++WG N +G LG+G
Sbjct: 134 SCGHYHSLALSKDSQV------------------------------FSWGKNSHGQLGLG 163
Query: 304 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
SP+RV+ P+ QV+ G H+ A+S ++GWG +S G
Sbjct: 164 KEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLCGT-SFGWGS----------NSAG 211
Query: 363 QL---GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QL G V P V +N+ + +SCG HT L +
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQ 253
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ +I + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ G + G N G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAG 211
Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N+ S +PL + LK VV IS G H++ +T DG+++ +G N +GQLG
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
K P VE + G+ ++ + V G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317
>gi|4557445|ref|NP_001259.1| RCC1 and BTB domain-containing protein 2 [Homo sapiens]
gi|197099869|ref|NP_001125174.1| RCC1 and BTB domain-containing protein 2 isoform 1 [Pongo abelii]
gi|332241903|ref|XP_003270124.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Nomascus leucogenys]
gi|397480404|ref|XP_003811474.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Pan
paniscus]
gi|426375447|ref|XP_004054550.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 1
[Gorilla gorilla gorilla]
gi|74739686|sp|O95199.1|RCBT2_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; Short=CHC1-L;
AltName: Full=RCC1-like G exchanging factor; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|75042250|sp|Q5RCZ7.1|RCBT2_PONAB RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|3789799|gb|AAC79987.1| RCC1-like G exchanging factor RLG [Homo sapiens]
gi|20810515|gb|AAH29052.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Homo sapiens]
gi|32891797|gb|AAP88928.1| chromosome condensation 1-like [Homo sapiens]
gi|55727208|emb|CAH90360.1| hypothetical protein [Pongo abelii]
gi|119629204|gb|EAX08799.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Homo sapiens]
gi|123979830|gb|ABM81744.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|124000595|gb|ABM87806.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|189055081|dbj|BAG38065.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + + P R++G K VV I+ G A+ GE+Y+WG N NGQLGLG
Sbjct: 183 QVGSGSTVNQPI-PRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN 241
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 242 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 293
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y + E + + ++IAA H SA + G VY++G
Sbjct: 294 --KSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 114/226 (50%), Gaps = 16/226 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
+ G G LGLG ++S P + + L+ G G H + T G V+ G N +
Sbjct: 69 VLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAY 128
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG + + L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G
Sbjct: 129 SQLG-NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSG 187
Query: 159 KKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ PIP +V CL A G +AV G+V WG G+G+LG G
Sbjct: 188 STVNQ--PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG----- 240
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S ++ TP + L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 241 ----NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 154/368 (41%), Gaps = 67/368 (18%)
Query: 45 NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
+GD G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 9 SGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
G N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+
Sbjct: 69 VLGTNCCGCLGLGD-VQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNA 127
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QLG G ++P LS + A G S+ +T G+V +WG SG++G
Sbjct: 128 YSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G + ++ PR + + C+ V I A +M
Sbjct: 187 GS---------TVNQPIPRRV-----------------TGCLQNKVVVTI----ACGQMC 216
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 331
+++ GE+Y WG N NG LG+G+ +P RV V +V+CG+
Sbjct: 217 CM--------AVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRV-AALQGIRVQRVACGYA 267
Query: 332 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 390
HT ++ EG++ WG +S GQLG GN + +PT V ++ +
Sbjct: 268 HTLVLTDEGQVYAWG------------ANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 315
Query: 391 CGFNHTGA 398
C HT A
Sbjct: 316 CHSTHTSA 323
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 110/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ L+G K A L + V T
Sbjct: 62 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLNG--KKIACLSYGSGPHIVLATTE 117
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSL---- 165
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 166 --------------------------VLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG A+ + G++ WG+ G+ GQLG GN +
Sbjct: 200 GCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLGLGNSGNQPT 247
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTD 274
>gi|108761023|ref|YP_629150.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
gi|108464903|gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
Length = 1466
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 156/338 (46%), Gaps = 55/338 (16%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV +A E + ++ G AH+L L G V+ G N GQLG + P+R++GL
Sbjct: 102 PVRLAALEN--IVSVVSGDAHSLALGADGSVWTWGGNSSGQLGDGTTTDRA-TPMRVAGL 158
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
VV ++ G HS A+ DG ++ WG N +GQLG G + P +V L+G+
Sbjct: 159 DS-VVAVAAGDFHSLALREDGTVWAWGTNFHGQLGRGHTQPGL--TPEQVPGLNGVVALA 215
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KV 240
A GF+ ++AV G V +WG+ GSG+LG G ST +P + EL G+ +V
Sbjct: 216 A--GFDFTLAVLEDGTVRAWGSNGSGQLGDGT---------STQRLSPVKVSELSGITEV 264
Query: 241 KIAAAGFLHSACIDENGRVYIFG-------------DRAV-------DKMLFQEGNHARR 280
+ AG H+ + ++G V+ +G DRAV +++ +
Sbjct: 265 R---AGTYHALALGKDGGVWTWGSNASGQLGDGTWNDRAVPMQVPGLERVKAVASMDSDS 321
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
+L+ G ++ WG+N +G LG G +P V G + V V G +H + +
Sbjct: 322 LALLDTGAVFAWGANGSGQLGDGDTTDRATPGPVPG---LNAVASVVGGAQHALVLRKDG 378
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
L W WGG GQLGHG ++ P V
Sbjct: 379 TL-WAWGGGL----------SGQLGHGGSERHVVPAPV 405
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 156/328 (47%), Gaps = 49/328 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G+LG G+ R P+ + S+ A++ G H+L L G V+A G N FGQ
Sbjct: 1139 WGDNTFGQLGDGTTTRRAVPLTV--YGLASVVAVSSGAWHSLALLSDGTVWAWGANGFGQ 1196
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + P++++GL +VV I +G +H+ A+ DG ++ WG N+ GQLG G +
Sbjct: 1197 LGDGTSTPRT-RPVQVAGLG-DVVAIGSGGYHALAVCSDGSVWTWGYNAFGQLGDGTAES 1254
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +PT+VE L G+ A G S+A+ G + +WG SG+LG G
Sbjct: 1255 R--SLPTRVEGLEGVVA--VAGGDHYSLALHSDGTLSAWGNNASGQLGDGT--------- 1301
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
T+ Y+ + V AG H+ + +G V+ +GD A ++ +G R
Sbjct: 1302 GTTRYS--RVAVKGVDGVVDVRAGATHTVALRGDGTVWTWGDNAFGQL--GDGASGTRMR 1357
Query: 281 ------PSLIS----------------GGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
P+L S G ++TWG N +G LG+G P RV+
Sbjct: 1358 LVPRPVPNLSSVSAVGAGARHTFAVALKGTVWTWGRNSHGQLGLGDNTNRTEPLRVR--- 1414
Query: 319 SESPVDQVSCGWKHTAAIS-EGKILTWG 345
S V VS G + A+ +G +L+WG
Sbjct: 1415 ELSDVTVVSGGADFSLAMKRDGTVLSWG 1442
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 141/324 (43%), Gaps = 43/324 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGLG+ + W V + L+ G AHTL + G V A G N GQ
Sbjct: 733 WGYNRFGQLGLGA--AGWSAVPVQVRGIGRVDRLSVGRAHTLMVRADGTVMAWGENGSGQ 790
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + P+ + G+ V +++G HS A+ DG ++ WG N+ GQLG G
Sbjct: 791 LGDGTST-HRTGPVSVPGVPC-VRSVASGIQHSLALACDGTVWAWGANARGQLGDGTTTP 848
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+V P VE L G+ A G + SVA+ G V SWG SG+LG G
Sbjct: 849 RV--TPGLVEGLRGVVALAA--GGDASVALRADGSVWSWGGNASGQLGDGTL-------- 896
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD------------------ 264
T P ++ L A G H+ + E+G ++ +G
Sbjct: 897 -TDRALPAHVEHLS--NAVAVAVGETHALAVGEDGALWAWGANGSGQLGDGGTAPSLTPV 953
Query: 265 --RAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
+ ++++ A ++ G + WG+N +G LG G+ P +V S
Sbjct: 954 RVKGLERVASVAAGRAFSVAVRDDGTAWAWGTNPSGQLGDGTNHARSVPNQVT---SLKG 1010
Query: 323 VDQVSCGWKHTAAIS-EGKILTWG 345
+ +S G H A+S +G + TWG
Sbjct: 1011 IRAMSAGAHHVVALSADGTVWTWG 1034
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 156/374 (41%), Gaps = 57/374 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG GS R+RPV + + A++ G +H++ L G V A G N +GQ
Sbjct: 633 WGDNGEGQLGDGSWADRFRPVQVPGLQ--GITAVSGGRSHSMALQGDGTVRAWGYNGYGQ 690
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + P I GL + + + H A+ DG L WG N GQLGLG
Sbjct: 691 LG-DGTLTSRVRPALIPGLTG-IQALHPSHLHVLALHADGTLRGWGYNRFGQLGLGAAGW 748
Query: 163 KVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+P+ + GI + ++G ++ V G V++WG GSG+LG G + G +
Sbjct: 749 SAVPVQVR-----GIGRVDRLSVGRAHTLMVRADGTVMAWGENGSGQLGDGTSTHRTGPV 803
Query: 222 RSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ GV V+ A+G HS + +G V+ +G A ++
Sbjct: 804 ------------SVPGVPCVRSVASGIQHSLALACDGTVWAWGANARGQLGDGTTTPRVT 851
Query: 281 PSLISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
P L+ G G +++WG N +G LG G++ P V+
Sbjct: 852 PGLVEGLRGVVALAAGGDASVALRADGSVWSWGGNASGQLGDGTLTDRALPAHVE---HL 908
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V+ G H A+ E L W WG + GQLG G + P V
Sbjct: 909 SNAVAVAVGETHALAVGEDGAL-WAWGA----------NGSGQLGDGGTAPSLTPVRVKG 957
Query: 381 GENVKALQVSCGFN 394
E V ++ F+
Sbjct: 958 LERVASVAAGRAFS 971
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 129/295 (43%), Gaps = 37/295 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ R RPV + + A+ GG H L + G V+ G N FGQ
Sbjct: 1189 WGANGFGQLGDGTSTPRTRPVQVAGLGD--VVAIGSGGYHALAVCSDGSVWTWGYNAFGQ 1246
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG SL P R+ GL+ VV ++ G H+S A+ DG L WG N++GQLG G
Sbjct: 1247 LGDGTAESRSL-PTRVEGLEG-VVAVAGGDHYSLALHSDGTLSAWGNNASGQLGDGTGTT 1304
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ ++V G +VA+ G G V +WG G+LG G + +
Sbjct: 1305 RY----SRVAVKGVDGVVDVRAGATHTVALRGDGTVWTWGDNAFGQLGDGASGTRM---- 1356
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP- 281
PR + L V AG H+ + G V+ +G + ++ + + P
Sbjct: 1357 ---RLVPRPVPNLS--SVSAVGAGARHTFAVALKGTVWTWGRNSHGQLGLGDNTNRTEPL 1411
Query: 282 --------SLISGGE-----------LYTWGSNENGCLGIGSIDVLHSPERVQGP 317
+++SGG + +WGS+ G LG+G+ SP +V P
Sbjct: 1412 RVRELSDVTVVSGGADFSLAMKRDGTVLSWGSSLYGSLGLGATGHRSSPGQVALP 1466
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 162/374 (43%), Gaps = 57/374 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R P+ E+ +KA+A + +L L +TG V+A G N GQ
Sbjct: 283 WGSNASGQLGDGTWNDRAVPMQVPGLER--VKAVASMDSDSLALLDTGAVFAWGANGSGQ 340
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + P + GL V + G H+ + DG L+ WG +GQLG G
Sbjct: 341 LGDGDTTDRA-TPGPVPGLNA-VASVVGGAQHALVLRKDGTLWAWGGGLSGQLGHGGSER 398
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
V+P P V L+G+ + A G S+A G G V +WG G+LG G + +R
Sbjct: 399 HVVPAP--VMRLAGVTSM--ATGSFHSLAALGDGSVWAWGRNTYGQLGDGSTAERHAAVR 454
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP- 281
++ L GV+ +AA HS + +G V+ +G A ++ RP
Sbjct: 455 ---------VEGLGGVRSVASAA--HHSLAVGMDGTVWAWGRNAAGQLGDGTTLDRARPV 503
Query: 282 -------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
+L S G ++ WG N G LG G+ +P RV G
Sbjct: 504 AVPGLTSVTAVAAGGSHVLALRSDGSVWAWGYNALGQLGDGTTVDRLTPVRVSG---LGA 560
Query: 323 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
V V+ G + A+ S+G + TWG G F GQLG G V + P V
Sbjct: 561 VVAVAAGSYFSMALQSDGTVWTWGEG-----FE-------GQLGDGGGVQRLSPVRVEGL 608
Query: 382 ENVKALQVSCGFNH 395
N+ +V+ G H
Sbjct: 609 ANIT--RVAAGSAH 620
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 160/383 (41%), Gaps = 62/383 (16%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCS---AFEKHSLKALACGGAHTLFLTETGCVYATG 96
A WG+ +YG+LG G + P+ + ++ + G H + G V G
Sbjct: 1081 ARAWGSNEYGQLGDGKTGPQLTPMAVKIEGPKIRPPVRTVRAWGQHAVVQMSDGTVQTWG 1140
Query: 97 LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
N FGQLG ++ PL + GL VV +S+G HS A+ DG ++ WG N GQLG
Sbjct: 1141 DNTFGQLGDGTTTRRAV-PLTVYGLAS-VVAVSSGAWHSLALLSDGTVWAWGANGFGQLG 1198
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + P+ +V L + + G ++AV G V +WG G+LG G
Sbjct: 1199 DGTSTPRTRPV--QVAGLGDVVAIGS--GGYHALAVCSDGSVWTWGYNAFGQLGDGT--- 1251
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFGDRAVDKMLFQEG 275
+ S P ++ LEGV +A AG H S + +G + +G+ A ++ +G
Sbjct: 1252 ------AESRSLPTRVEGLEGV---VAVAGGDHYSLALHSDGTLSAWGNNASGQL--GDG 1300
Query: 276 NHARRPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSPER 313
R S ++ G ++TWG N G LG G+
Sbjct: 1301 TGTTRYSRVAVKGVDGVVDVRAGATHTVALRGDGTVWTWGDNAFGQLGDGASGTRM--RL 1358
Query: 314 VQGPFSE-SPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
V P S V V G +HT A++ +G + TW G +S GQLG G++ +
Sbjct: 1359 VPRPVPNLSSVSAVGAGARHTFAVALKGTVWTW------------GRNSHGQLGLGDNTN 1406
Query: 372 YIHPTIVNFGENVKALQVSCGFN 394
P V +V + F+
Sbjct: 1407 RTEPLRVRELSDVTVVSGGADFS 1429
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 156/370 (42%), Gaps = 57/370 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG G E R VV + + + + ++A G H+L G V+A G N +G
Sbjct: 383 WGGGLSGQLGHGGSE---RHVVPAPVMRLAGVTSMATGSFHSLAALGDGSVWAWGRNTYG 439
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG + +R+ GL V +++ HHS A+ +DG ++ WG+N+ GQLG G
Sbjct: 440 QLG-DGSTAERHAAVRVEGLGG-VRSVASAAHHSLAVGMDGTVWAWGRNAAGQLGDGTTL 497
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ V L+ + A G +A+ G V +WG G+LG G
Sbjct: 498 DRARPV--AVPGLTSV--TAVAAGGSHVLALRSDGSVWAWGYNALGQLGDGT-------- 545
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ TP + L G V +AA + S + +G V+ +G+ ++ G P
Sbjct: 546 -TVDRLTPVRVSGL-GAVVAVAAGSYF-SMALQSDGTVWTWGEGFEGQLGDGGGVQRLSP 602
Query: 282 SLISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+ G G ++ WG N G LG GS P +V G
Sbjct: 603 VRVEGLANITRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGSWADRFRPVQVPG---LQ 659
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
+ VS G H+ A+ +G + WG+ G GQLG G + P ++
Sbjct: 660 GITAVSGGRSHSMALQGDGTVRAWGYNGY------------GQLGDGTLTSRVRPALIPG 707
Query: 381 GENVKALQVS 390
++AL S
Sbjct: 708 LTGIQALHPS 717
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 145/347 (41%), Gaps = 49/347 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R P ++ + ++A++ G H + L+ G V+ G N GQ
Sbjct: 983 WGTNPSGQLGDGTNHARSVPNQVTSLK--GIRAMSAGAHHVVALSADGTVWTWGDNTLGQ 1040
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + P ++ L+ V ++ G + A+ +DG WG N GQLG GK
Sbjct: 1041 LGDGSSSPTGMWPRQVPELRG-VEAVAAGEQFTVAVLLDGTARAWGSNEYGQLGDGKTGP 1099
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQ-SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ P+ K+E + + Q +V G V +WG G+LG G
Sbjct: 1100 QLTPMAVKIEGPKIRPPVRTVRAWGQHAVVQMSDGTVQTWGDNTFGQLGDGT-------- 1151
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+T P + L V ++G HS + +G V+ +G ++ RP
Sbjct: 1152 -TTRRAVPLTVYGL--ASVVAVSSGAWHSLALLSDGTVWAWGANGFGQLGDGTSTPRTRP 1208
Query: 282 SLISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
++G G ++TWG N G LG G+ + P RV+G
Sbjct: 1209 VQVAGLGDVVAIGSGGYHALAVCSDGSVWTWGYNAFGQLGDGTAESRSLPTRVEG---LE 1265
Query: 322 PVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
V V+ G ++ A+ S GT S G+++ GQLG G
Sbjct: 1266 GVVAVAGGDHYSLALH-----------SDGTLSAWGNNASGQLGDGT 1301
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 125/302 (41%), Gaps = 54/302 (17%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
++I+ G HS ++ G+++ WG N +GQLG + + + + P ++ L I + + G
Sbjct: 61 MRIAAGTQHSLYLSPGGDVWAWGGNGSGQLGGAETSLQGL-APVRLAALENIVSVVS--G 117
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
S+A+ G V +WG SG+LG G +T TP + L+ V AA
Sbjct: 118 DAHSLALGADGSVWTWGGNSSGQLGDGT---------TTDRATPMRVAGLD--SVVAVAA 166
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG------------------- 286
G HS + E+G V+ +G ++ P + G
Sbjct: 167 GDFHSLALREDGTVWAWGTNFHGQLGRGHTQPGLTPEQVPGLNGVVALAAGFDFTLAVLE 226
Query: 287 -GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTW 344
G + WGSN +G LG G+ SP +V S + +V G H A+ +G + TW
Sbjct: 227 DGTVRAWGSNGSGQLGDGTSTQRLSPVKVS---ELSGITEVRAGTYHALALGKDGGVWTW 283
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV----SCGFNHTGALL 400
G ++ GQLG G D P V E VKA+ S TGA+
Sbjct: 284 ------------GSNASGQLGDGTWNDRAVPMQVPGLERVKAVASMDSDSLALLDTGAVF 331
Query: 401 EY 402
+
Sbjct: 332 AW 333
>gi|410208770|gb|JAA01604.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410264080|gb|JAA20006.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410293806|gb|JAA25503.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410338543|gb|JAA38218.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
Length = 555
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + + P R++G K VV I+ G A+ GE+Y+WG N NGQLGLG
Sbjct: 183 QVGSGSTVNQPI-PRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN 241
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 242 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 293
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y + E + + ++IAA H SA + G VY++G
Sbjct: 294 --KSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 113/224 (50%), Gaps = 16/224 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQ 102
G G LGLG ++S P + + L+ G G H + T G V+ G N + Q
Sbjct: 71 GTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQ 130
Query: 103 LGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G
Sbjct: 131 LG-NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGST 189
Query: 161 AAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ PIP +V CL A G +AV G+V WG G+G+LG G
Sbjct: 190 VNQ--PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG------- 240
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S ++ TP + L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 241 --NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 154/368 (41%), Gaps = 67/368 (18%)
Query: 45 NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
+GD G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 9 SGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
G N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+
Sbjct: 69 VLGTNCCGCLGLGD-VQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNA 127
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QLG G ++P LS + A G S+ +T G+V +WG SG++G
Sbjct: 128 YSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G + ++ PR + + C+ V I A +M
Sbjct: 187 GS---------TVNQPIPRRV-----------------TGCLQNKVVVTI----ACGQMC 216
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 331
+++ GE+Y WG N NG LG+G+ +P RV V +V+CG+
Sbjct: 217 CM--------AVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRV-AALQGIRVQRVACGYA 267
Query: 332 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 390
HT ++ EG++ WG +S GQLG GN + +PT V ++ +
Sbjct: 268 HTLVLTDEGQVYAWG------------ANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 315
Query: 391 CGFNHTGA 398
C HT A
Sbjct: 316 CHSTHTSA 323
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 110/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ L+G K A L + V T
Sbjct: 62 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLNG--KKIACLSYGSGPHIVLATTE 117
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSL---- 165
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 166 --------------------------VLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG A+ + G++ WG+ G+ GQLG GN +
Sbjct: 200 GCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLGLGNSGNQPT 247
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTD 274
>gi|313236427|emb|CBY11744.1| unnamed protein product [Oikopleura dioica]
Length = 516
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 148/320 (46%), Gaps = 50/320 (15%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA--HTLFLTETGCVYATGLNDFG 101
G G YGRLG G+ S P++ F K L G+ H++ + + G ++ G D+G
Sbjct: 186 GKGSYGRLGNGASASSSSPILIE-FPAPVRKILTSKGSDGHSIAIGKNGQIWTWGDGDYG 244
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG ++ L + + +V G+ HS+A+ G LYMWG+ G+LGLG
Sbjct: 245 KLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDAL 304
Query: 162 AKVIPI--PTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSIL 218
+ +P+ P E Q GF +V ++ G+ V S+GA +G+LGHG
Sbjct: 305 QRSVPVQVPDIREA------SQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGD----- 353
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--------------- 263
+ ++ P++I L+G+ + AAG SA + G +Y++G
Sbjct: 354 ----TNRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPCLGNGSSDETFM 409
Query: 264 ---------DRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGS-IDVLHSPER 313
R V + E NH +L G ++TWG+N+NG G GS + SP+
Sbjct: 410 LPKVVRGLSGRVVIDIAVGE-NHV--VALTKDGLVFTWGNNQNGQCGTGSGMATYTSPQM 466
Query: 314 VQGPFSESPVDQVSCGWKHT 333
VQG + + QV+ G HT
Sbjct: 467 VQG-LHGAGIQQVTAGTTHT 485
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 16/211 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDF 100
+WG GDYGRLGLG R PV + S + CG HT+ L+ G V++ G +
Sbjct: 289 MWGEGDYGRLGLGDALQRSVPVQVPDIREAS--QVVCGFNHTVVLSTDGRTVWSFGAAEN 346
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + P I L+ + QI+ G S+A+T +G LY+WG LG G
Sbjct: 347 GKLGHGDT-NRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPC--LGNG- 402
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + +P V LSG A+G VA+T G V +WG +G+ G G G
Sbjct: 403 SSDETFMLPKVVRGLSGRVVIDIAVGENHVVALTKDGLVFTWGNNQNGQCGTGS-----G 457
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
TS P++++ L G ++ AG H+
Sbjct: 458 MATYTS---PQMVQGLHGAGIQQVTAGTTHT 485
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 127/309 (41%), Gaps = 56/309 (18%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ G N QL + L P +S K V+ ++ G + + A+ +G + GK S
Sbjct: 131 VFCWGSNSSQQLTDATPEDKLLYPRNLSVYGK-VMSMTAGQYCTFAVLSNGTVMANGKGS 189
Query: 152 NGQLGLGKKAAKVIPIPTKVEC-LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
G+LG G A+ PI + + I T + + G S+A+ G++ +WG G G+LG
Sbjct: 190 YGRLGNGASASSSSPILIEFPAPVRKILTSKGSDG--HSIAIGKNGQIWTWGDGDYGKLG 247
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
HG ST++ +P+LI+ L + A G HSA +
Sbjct: 248 HGD---------STTQKSPKLIEALASRVIVDADCGHRHSAAV----------------- 281
Query: 271 LFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 330
G LY WG + G LG+G D L VQ P QV CG+
Sbjct: 282 -------------CDAGHLYMWGEGDYGRLGLG--DALQRSVPVQVP-DIREASQVVCGF 325
Query: 331 KHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 390
HT +S W +G + G+LGHG+ P I++ + + Q++
Sbjct: 326 NHTVVLSTDGRTVWSFGAAE----------NGKLGHGDTNRQFRPKIIDALQGLTITQIA 375
Query: 391 CGFNHTGAL 399
G + A+
Sbjct: 376 AGTQISAAV 384
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 106/258 (41%), Gaps = 57/258 (22%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E++ WG NS+ QL K++ P + + + A G + AV G V++ G
Sbjct: 130 EVFCWGSNSSQQLTDATPEDKLL-YPRNLSVYGKVMSMTA--GQYCTFAVLSNGTVMANG 186
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G GRLG+G S S +P LI+ V+
Sbjct: 187 KGSYGRLGNGA---------SASSSSPILIEFPAPVR----------------------- 214
Query: 263 GDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
K+L +G+ ++ G+++TWG + G LG G SP+ ++ S
Sbjct: 215 ------KILTSKGSDGHSIAIGKNGQIWTWGDGDYGKLGHGDSTTQKSPKLIEALASRVI 268
Query: 323 VDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
VD CG +H+AA+ + G + WG G G+LG G+ + P V
Sbjct: 269 VD-ADCGHRHSAAVCDAGHLYMWGEGDY------------GRLGLGDALQRSVP--VQVP 313
Query: 382 ENVKALQVSCGFNHTGAL 399
+ +A QV CGFNHT L
Sbjct: 314 DIREASQVVCGFNHTVVL 331
>gi|332241905|ref|XP_003270125.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Nomascus leucogenys]
Length = 556
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 187
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + + P R++G K VV I+ G A+ GE+Y+WG N NGQLGLG
Sbjct: 188 QVGSGSTVNQPI-PRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN 246
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 247 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 298
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y + E + + ++IAA H SA + G VY++G
Sbjct: 299 --KSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 340
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 114/226 (50%), Gaps = 16/226 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
+ G G LGLG ++S P + + L+ G G H + T G V+ G N +
Sbjct: 74 VLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAY 133
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG + + L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G
Sbjct: 134 SQLG-NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSG 192
Query: 159 KKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ PIP +V CL A G +AV G+V WG G+G+LG G
Sbjct: 193 STVNQ--PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN---- 246
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S ++ TP + L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 247 -----SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 146/347 (42%), Gaps = 60/347 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 35 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 93
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 94 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 153
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 154 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPIPRRV 203
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW 292
+ C+ V I A +M +++ GE+Y W
Sbjct: 204 -----------------TGCLQNKVVVTI----ACGQMCCM--------AVVDTGEVYVW 234
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 351
G N NG LG+G+ +P RV V +V+CG+ HT ++ EG++ WG
Sbjct: 235 GYNGNGQLGLGNSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWG------ 287
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 288 ------ANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA 328
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 233 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 292
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 293 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 345
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 346 --SVILPHLTHFSCTDDVF 362
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 110/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ L+G K A L + V T
Sbjct: 67 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLNG--KKIACLSYGSGPHIVLATTE 122
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 123 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSL---- 170
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 171 --------------------------VLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 204
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG A+ + G++ WG+ G+ GQLG GN +
Sbjct: 205 GCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLGLGNSGNQPT 252
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 253 PCRVAALQGIRVQRVACGYAHTLVLTD 279
>gi|62088666|dbj|BAD92780.1| RCC1-like G exchanging factor RLG variant [Homo sapiens]
Length = 556
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 187
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + + P R++G K VV I+ G A+ GE+Y+WG N NGQLGLG
Sbjct: 188 QVGSGSTVNQPI-PRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN 246
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 247 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 298
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y + E + + ++IAA H SA + G VY++G
Sbjct: 299 --KSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 340
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 114/226 (50%), Gaps = 16/226 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
+ G G LGLG ++S P + + L+ G G H + T G V+ G N +
Sbjct: 74 VLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAY 133
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG + + L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G
Sbjct: 134 SQLG-NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSG 192
Query: 159 KKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ PIP +V CL A G +AV G+V WG G+G+LG G
Sbjct: 193 STVNQ--PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN---- 246
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S ++ TP + L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 247 -----SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 146/347 (42%), Gaps = 60/347 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 35 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 93
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 94 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 153
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 154 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPIPRRV 203
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW 292
+ C+ V I A +M +++ GE+Y W
Sbjct: 204 -----------------TGCLQNKVVVTI----ACGQMCCM--------AVVDTGEVYVW 234
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 351
G N NG LG+G+ +P RV V +V+CG+ HT ++ EG++ WG
Sbjct: 235 GYNGNGQLGLGNSGNQPTPCRVAA-LQGIRVQRVACGYAHTLVLTDEGQVYAWG------ 287
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 288 ------ANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 233 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 292
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 293 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 345
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 346 --SVILPHLTHFSCTDDVF 362
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 110/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ L+G K A L + V T
Sbjct: 67 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLNG--KKIACLSYGSGPHIVLATTE 122
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 123 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSL---- 170
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 171 --------------------------VLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 204
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG A+ + G++ WG+ G+ GQLG GN +
Sbjct: 205 GCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLGLGNSGNQPT 252
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 253 PCRVAALQGIRVQRVACGYAHTLVLTD 279
>gi|431913810|gb|ELK15239.1| RCC1 and BTB domain-containing protein 1 [Pteropus alecto]
Length = 531
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 140/301 (46%), Gaps = 49/301 (16%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDSQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
TP V++AA LHS C+++ + G +A +L
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ----IVCG-------------YAHTLALTDE 251
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTW 344
G LY WG+N G LG G+ + L +P + E V+ +C HT+A G + W
Sbjct: 252 GLLYAWGANTYGQLGTGNKNNLLNPVHIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMW 310
Query: 345 G 345
G
Sbjct: 311 G 311
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 118/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K+VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLN 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+ ++ E E V V+IAA H SA + G VY++G
Sbjct: 276 PV--------HIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 138/312 (44%), Gaps = 51/312 (16%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGNSANEALYVTDNDEVFVFGMNYSNCLGTGDSQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V A G HS + +G V+ +G ++ G+ A +P+
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV S V+Q+
Sbjct: 180 IKKVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG ++ GQLG GN + ++P + +
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLNPVHIMVEKERVV 287
Query: 387 LQVSCGFNHTGA 398
+C HT A
Sbjct: 288 EIAACHSAHTSA 299
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P+ I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLNPVHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTSFSCTDDVF 333
>gi|171847108|gb|AAI62028.1| Rpgr protein [Rattus norvegicus]
Length = 677
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 173/395 (43%), Gaps = 71/395 (17%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K D+ + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDVPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE--------NIGYSLEPLRISGL 121
+K ACG HTL T+TG VYA G N+ GQLG+ + IG+ P I
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGF-FTPSDI--- 179
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+ Q+S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G
Sbjct: 180 ---IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIP----HEVTVGKPISW 232
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
+ G+ S VT G++ ++G +G+LG + I + +P+ + + ++
Sbjct: 233 ISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLI-------NHRSPQRVLGIPDKVIQ 285
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLG 301
+A G G + ++ V Y +G + G LG
Sbjct: 286 VACGG----------GHTVVLTEKVV----------------------YAFGLGQFGQLG 313
Query: 302 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSS 360
+G+ S ++ + + +SCG HTA +++ G + T+G G HG
Sbjct: 314 LGTFLFETSEPKIIDRIKDQKISHISCGENHTALMTDIGLMYTFG-DGRHGKLG------ 366
Query: 361 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
LG N + PT+ + ++CG H
Sbjct: 367 ---LGMENFTNQFFPTLCSNFLKFTVQLIACGGCH 398
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 170/379 (44%), Gaps = 61/379 (16%)
Query: 50 RLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTL--FLTETGCVYATGLNDFGQLGI 105
R G G L RP V + F K + A G + +TG V+ FG+
Sbjct: 6 RWGTGGLGQYLRPNRVAPAVFPKQAQIPFAAFGMAEPESLVPDTGAVFT-----FGKTKF 60
Query: 106 SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ENI P + + +S G H++ +T + +LYM+G N+ GQLGLG K+A I
Sbjct: 61 AENI-----PSKFWFKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSA--I 113
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
PT ++ L K AA G ++ T G V + G G+LG G F
Sbjct: 114 SKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTF-HQIG 172
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--- 282
+TP I +K +AG SA + E+G+++++GD + ++ + ++ P
Sbjct: 173 FFTPSDI-------IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVT 225
Query: 283 -----------------LISGGELYTWGSNENGCLGIGSIDVLH--SPERVQGPFSESPV 323
+ + GELYT+G ENG LG+ + +++ SP+RV G V
Sbjct: 226 VGKPISWISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINHRSPQRVLG--IPDKV 283
Query: 324 DQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGE 382
QV+CG HT ++E + +G G GQLG G + + P I++ +
Sbjct: 284 IQVACGGGHTVVLTEKVVYAFGLG------------QFGQLGLGTFLFETSEPKIIDRIK 331
Query: 383 NVKALQVSCGFNHTGALLE 401
+ K +SCG NHT + +
Sbjct: 332 DQKISHISCGENHTALMTD 350
>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
Length = 1015
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 164/367 (44%), Gaps = 66/367 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEK-----HSLKALACGGAHTLFLTETGCVYATGL 97
WG G LGLG +E V+ + E+ +++ ++CG HT+F+ G VY G
Sbjct: 4 WGAARNGELGLGGIEED---VILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTCGS 60
Query: 98 NDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLG 156
ND+GQLG ++ G+ P I+ L + + Q+S G +H+ + +++ WG + GQLG
Sbjct: 61 NDYGQLG--QDKGHK-RPTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQLG 117
Query: 157 LGKKA-AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+A P V+ LS + Q A G + S+A++ G++ SWG G+LG G
Sbjct: 118 HTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIGS-- 175
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ ++ P+ + L G+ AG HS + ++G V+ F
Sbjct: 176 -------TKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGF------------- 215
Query: 276 NHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
G N G LG+G P V+ V +SCG +HTA
Sbjct: 216 -----------------GRNTFGQLGLGDTGDRKYPTHVKS-LRSLKVTHISCGEEHTAV 257
Query: 336 IS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
++ +G +LT+G G S GQLGH ++ P V ++ Q++CG
Sbjct: 258 LTLDGGVLTFGAG------------SYGQLGHNSNNHEALPRKVFELMGLEVTQLACGRM 305
Query: 395 HTGALLE 401
HT A +E
Sbjct: 306 HTMAYVE 312
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 39/301 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ DYG+LG + RP V +A + S++ ++CG H L + + V++ G +D GQL
Sbjct: 59 GSNDYGQLGQD--KGHKRPTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQL 116
Query: 104 GISENIG--YSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G + G S P + L ++VQ++ G HS A++ DG ++ WG NS+GQLG+G
Sbjct: 117 GHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIG-- 174
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ K P P ++ L+GI Q G S ++ G V +G G+LG G
Sbjct: 175 STKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGD------- 227
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ P +K L +KV + G H+A + +G V FG + ++ NH
Sbjct: 228 --TGDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNNHEAL 285
Query: 281 PSLI-----------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
P + S G +Y++G NG LG ++P V GP
Sbjct: 286 PRKVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLGSKGTTNCNTPITVDGP 345
Query: 318 F 318
F
Sbjct: 346 F 346
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 94/170 (55%), Gaps = 5/170 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +G+LG+GS +++ +P ++ + GG+H+ L+++G V+ G N FGQ
Sbjct: 163 WGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQ 222
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + G P + L+ +V IS G H++ +T+DG + +G S GQLG
Sbjct: 223 LGLGDT-GDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNN 281
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLG 210
+ +P KV L G+ Q A G ++A V G++ S+G GG+G+LG
Sbjct: 282 HEA--LPRKVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLG 329
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 124/281 (44%), Gaps = 48/281 (17%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++ WG NG+LGLG VI P + + ++ + G + +V V G V + G+
Sbjct: 1 MFCWGAARNGELGLGGIEEDVILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTCGS 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LG + G R P +I L+ ++ + G H+ +++ +V+ +G
Sbjct: 61 NDYGQLGQDK-----GHKR------PTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWG 109
Query: 264 DRAVDKM---LFQEGNHARRPSLI----------------------SGGELYTWGSNENG 298
++ L GN++RRP ++ + G +++WG+N +G
Sbjct: 110 YDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHG 169
Query: 299 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGH 358
LGIGS P+ + + P Q+ G H+ +S+ + +G+G TF
Sbjct: 170 QLGIGSTKNQPKPQELTS-LTGIPFCQIVAGGSHSFVLSKSGAV-FGFG--RNTF----- 220
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
GQLG G+ D +PT V ++K +SCG HT L
Sbjct: 221 ---GQLGLGDTGDRKYPTHVKSLRSLKVTHISCGEEHTAVL 258
>gi|410947356|ref|XP_003980415.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Felis catus]
Length = 531
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 139/301 (46%), Gaps = 49/301 (16%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
TP V++AA LHS C+++ + G +A +L
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ----IVCG-------------YAHTLALTDE 251
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTW 344
G LY WG+N G LG G+ + L SP + E V+ +C HT+A G + W
Sbjct: 252 GLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMW 310
Query: 345 G 345
G
Sbjct: 311 G 311
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 137/315 (43%), Gaps = 57/315 (18%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFG-----------------DRAVDKMLFQE 274
IK++ V A G HS + +G V+ +G R V L
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCL--- 178
Query: 275 GNHARRP-----------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
H +R +++ GE+Y WG N NG LG+G+ +P RV S V
Sbjct: 179 --HIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-V 235
Query: 324 DQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 383
+Q+ CG+ HT A+++ +L + WG ++ GQLG GN + + P + +
Sbjct: 236 NQIVCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHIMVEKE 284
Query: 384 VKALQVSCGFNHTGA 398
+C HT A
Sbjct: 285 RVVEIAACHSAHTSA 299
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
>gi|383456202|ref|YP_005370191.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
gi|380729703|gb|AFE05705.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
Length = 806
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 163/371 (43%), Gaps = 65/371 (17%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
Q A WG+ YG+LG G+ R+ P AL+ HTL L + G V+
Sbjct: 458 QDGTADAWGHNGYGQLGDGTSVDRFLPGPVQVQGLTGATALSATAYHTLALAQDGTVWGW 517
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G ND GQLG + ++ + P + GL V +++G +HS A+ DG ++ WG N+ GQL
Sbjct: 518 GYNDSGQLGDTVDM-VRVTPAPLPGLTG-VTALASGTYHSLALKQDGTVWAWGLNNLGQL 575
Query: 156 GLGKKAAKV--IPIP--TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
G G ++ +P+P T V L A S+A+ G V +WG SG+LG
Sbjct: 576 GDGTTVSRTEQMPVPGLTDVTAL--------AASTYHSLALKQDGTVWTWGYNSSGQLGD 627
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G +S L TP + L GV AAG +HS + ++G V+ +G R D L
Sbjct: 628 GTTASRL---------TPAQVPGLTGVSA--IAAGLVHSLALKQDGTVWAWG-RNTDGQL 675
Query: 272 FQEGNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLH 309
G P +L G ++WG N G LG +I
Sbjct: 676 -GNGAAVNSPVPVQVQGLTGVSAIAAGSYHSLALKQDGTAWSWGRNGTGQLGNETITGSL 734
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAA-ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
+P +VQG + V ++ G H+ A + +G + TW G+++ G+LG G
Sbjct: 735 TPVQVQG---LTAVTALAGGDAHSMALLRDGTVWTW------------GYNAEGELGDGT 779
Query: 369 DVDYIHPTIVN 379
+D P V
Sbjct: 780 TLDRTAPVRVQ 790
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 135/294 (45%), Gaps = 39/294 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LG R P + ALA G H+L L + G V+A GLN+ GQ
Sbjct: 517 WGYNDSGQLGDTVDMVRVTPAPLPGLT--GVTALASGTYHSLALKQDGTVWAWGLNNLGQ 574
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + E + + GL +V ++ +HS A+ DG ++ WG NS+GQLG G A+
Sbjct: 575 LGDGTTVSRT-EQMPVPGLT-DVTALAASTYHSLALKQDGTVWTWGYNSSGQLGDGTTAS 632
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P +V L+G+ A G S+A+ G V +WG G+LG+G
Sbjct: 633 RLTPA--QVPGLTGV--SAIAAGLVHSLALKQDGTVWAWGRNTDGQLGNGA--------- 679
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD------------------ 264
+ + P ++ L GV AAG HS + ++G + +G
Sbjct: 680 AVNSPVPVQVQGLTGVSA--IAAGSYHSLALKQDGTAWSWGRNGTGQLGNETITGSLTPV 737
Query: 265 --RAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
+ + + G A +L+ G ++TWG N G LG G+ +P RVQG
Sbjct: 738 QVQGLTAVTALAGGDAHSMALLRDGTVWTWGYNAEGELGDGTTLDRTAPVRVQG 791
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 152/349 (43%), Gaps = 57/349 (16%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEVVQISTGYHH 134
+A GGAH+L + + G A G N +GQLG ++ L P+++ GL +T Y H
Sbjct: 446 IAAGGAHSLVVRQDGTADAWGHNGYGQLGDGTSVDRFLPGPVQVQGLTGATALSATAY-H 504
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+ DG ++ WG N +GQLG +V P P + L+G+ A G S+A+
Sbjct: 505 TLALAQDGTVWGWGYNDSGQLGDTVDMVRVTPAP--LPGLTGV--TALASGTYHSLALKQ 560
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G V +WG G+LG G S R+ P L V AA HS +
Sbjct: 561 DGTVWAWGLNNLGQLGDGTTVS-----RTEQMPVPGL------TDVTALAASTYHSLALK 609
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARR--PSLISG--------------------GELYTW 292
++G V+ +G + ++ +G A R P+ + G G ++ W
Sbjct: 610 QDGTVWTWGYNSSGQL--GDGTTASRLTPAQVPGLTGVSAIAAGLVHSLALKQDGTVWAW 667
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT 352
G N +G LG G+ P +VQG + V ++ G H+ A+ + W W G +GT
Sbjct: 668 GRNTDGQLGNGAAVNSPVPVQVQG---LTGVSAIAAGSYHSLALKQDGT-AWSW-GRNGT 722
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GQLG+ + P V V AL + G H+ ALL
Sbjct: 723 ---------GQLGNETITGSLTPVQVQGLTAVTAL--AGGDAHSMALLR 760
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 133/320 (41%), Gaps = 54/320 (16%)
Query: 103 LGISENIGYSLE---PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG+S + LE P S + V I+ G HS + DG WG N GQLG G
Sbjct: 420 LGLSASASMILEGGTPCAPS--PRRVTWIAAGGAHSLVVRQDGTADAWGHNGYGQLGDGT 477
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P P +V+ L+G T +A + ++A+ G V WG SG+LG +
Sbjct: 478 SVDRFLPGPVQVQGLTGA-TALSATAY-HTLALAQDGTVWGWGYNDSGQLGD-----TVD 530
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV----DKMLFQEG 275
+R TP + L GV A+G HS + ++G V+ +G + D
Sbjct: 531 MVR----VTPAPLPGLTGVTAL--ASGTYHSLALKQDGTVWAWGLNNLGQLGDGTTVSRT 584
Query: 276 NHARRPSLIS----------------GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
P L G ++TWG N +G LG G+ +P +V G
Sbjct: 585 EQMPVPGLTDVTALAASTYHSLALKQDGTVWTWGYNSSGQLGDGTTASRLTPAQVPG--- 641
Query: 320 ESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
+ V ++ G H+ A+ + + W W G ++ GQLG+G V+ P V
Sbjct: 642 LTGVSAIAAGLVHSLALKQDGTV-WAW----------GRNTDGQLGNGAAVNSPVPVQVQ 690
Query: 380 FGENVKALQVSCGFNHTGAL 399
V A ++ G H+ AL
Sbjct: 691 GLTGVSA--IAAGSYHSLAL 708
>gi|326506178|dbj|BAJ86407.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 389
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 160/374 (42%), Gaps = 70/374 (18%)
Query: 37 RRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R A L WG+G+ G+LG+G + + R A + +++ A+ G ++L + + G ++
Sbjct: 6 RPVAVLAWGSGEDGQLGMGGCDEKDRARCICALDAYAVSAVVAGSRNSLAICDDGSLFTW 65
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N G LG P + L ++VQ + G H A+ G Y WG N GQ
Sbjct: 66 GWNQRGTLGHPPETKTESSPAHVDALVGVKIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQ 125
Query: 155 LGL-------GKKA-AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
G G +A + IPIP + C + +Q A G SV +T G V +WG
Sbjct: 126 CGEEPERKEDGTRALRRDIPIPQR--CALKLKVRQVAAGGTHSVVLTQEGHVWTWG---- 179
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
+ G +++ S TP ++ LE +V + A G H+ + +
Sbjct: 180 -------QPWPPGDIKNIS--TPVRVQGLE--QVSMIAVGAFHNLAL------------S 216
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
VD++ L+ WG+NE G LGIG P RV+G + S VD
Sbjct: 217 VDRI------------------LWAWGNNEYGQLGIGDTQPRSQPIRVEGLSNLSLVDIA 258
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND-VDYIHPTIVNFGENVK 385
+ GW A EG++ WG G H G+LG G+D ++ P V
Sbjct: 259 AGGWHSAALTKEGEVYAWG-RGEH-----------GRLGFGDDKSSHMVPLQVQLLAGED 306
Query: 386 ALQVSCGFNHTGAL 399
+QVSCG H+ L
Sbjct: 307 IVQVSCGGTHSVVL 320
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 110/232 (47%), Gaps = 24/232 (10%)
Query: 40 AALWGNGDYGRLGLGSLES--------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
A WG +YG+ G R P+ K ++ +A GG H++ LT+ G
Sbjct: 115 AYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGGTHSVVLTQEGH 174
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ +GQ +I P+R+ GL+ +V I+ G H+ A++VD L+ WG N
Sbjct: 175 VWT-----WGQPWPPGDIKNISTPVRVQGLE-QVSMIAVGAFHNLALSVDRILWAWGNNE 228
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
GQLG+G + PI +VE LS + A G S A+T G+V +WG G GRLG
Sbjct: 229 YGQLGIGDTQPRSQPI--RVEGLSNLSLVDIAAGGWHSAALTKEGEVYAWGRGEHGRLGF 286
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G + S S P ++ L G + + G HS + +GR++ +G
Sbjct: 287 GDDKS--------SHMVPLQVQLLAGEDIVQVSCGGTHSVVLTSDGRIFSYG 330
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 90/154 (58%), Gaps = 5/154 (3%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV E+ S+ +A G H L L+ ++A G N++GQLGI + S +P+R+ GL
Sbjct: 193 PVRVQGLEQVSM--IAVGAFHNLALSVDRILWAWGNNEYGQLGIGDTQPRS-QPIRVEGL 249
Query: 122 KK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
+V I+ G HS+A+T +GE+Y WG+ +G+LG G + + +P +V+ L+G
Sbjct: 250 SNLSLVDIAAGGWHSAALTKEGEVYAWGRGEHGRLGFGDDKSSHM-VPLQVQLLAGEDIV 308
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
Q + G SV +T G++ S+G G GRLG G++
Sbjct: 309 QVSCGGTHSVVLTSDGRIFSYGRGDHGRLGDGRK 342
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 91/169 (53%), Gaps = 6/169 (3%)
Query: 38 RFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
R WGN +YG+LG+G + R +P+ SL +A GG H+ LT+ G VYA G
Sbjct: 219 RILWAWGNNEYGQLGIGDTQPRSQPIRVEGLSNLSLVDIAAGGWHSAALTKEGEVYAWGR 278
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+ G+LG ++ + PL++ L +++VQ+S G HS +T DG ++ +G+ +G+LG
Sbjct: 279 GEHGRLGFGDDKSSHMVPLQVQLLAGEDIVQVSCGGTHSVVLTSDGRIFSYGRGDHGRLG 338
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK----VLSW 201
G+K P+ + L T ++ G Q+ V GG+ +++W
Sbjct: 339 DGRKVTTGHPMEVPIN-LPPPKTSTSSEGLWQANYVACGGRHTLAIVTW 386
>gi|357147842|ref|XP_003574510.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 389
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 158/377 (41%), Gaps = 68/377 (18%)
Query: 33 STLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
+ L R A L WG+G+ G+LG+G + + +A + +++ A+ G ++L + + G
Sbjct: 2 APLPRPAAVLAWGSGEDGQLGMGGCDEKDWAHRVAALDPYAVSAVVAGSRNSLAICDDGR 61
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKN 150
++ G N G LG P + L ++VQ + G H A+ G Y WG N
Sbjct: 62 LFTWGWNQRGTLGHPPETKTESSPAPVEALAGVKIVQAAIGGWHCLAVDDKGRAYAWGGN 121
Query: 151 SNGQLGL-------GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
GQ G G +A + IPT C + +Q A G SV +T G V +WG
Sbjct: 122 EYGQCGEEPERKEDGTRALRR-DIPTPQRCALKLKVQQVAAGGTHSVVLTQEGHVWTWG- 179
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G ++ S TP ++ LE KV + A G H+ + E+
Sbjct: 180 ----------QPWPPGDIKQIS--TPVRVQGLE--KVMMIAVGAFHNLALSED------- 218
Query: 264 DRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
L+ WG+NE G LGIG P RV+G S V
Sbjct: 219 -----------------------AVLWAWGNNEYGQLGIGDTQPRSQPIRVEGLSGLSLV 255
Query: 324 DQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND-VDYIHPTIVNFGE 382
D + GW TA +G++ WG G H G+LG G+D ++ P V +
Sbjct: 256 DIAAGGWHSTALTKDGEVYAWG-RGEH-----------GRLGFGDDKSSHMVPLKVQLLD 303
Query: 383 NVKALQVSCGFNHTGAL 399
+QVSCG H+ AL
Sbjct: 304 GEDIVQVSCGGTHSVAL 320
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 91/154 (59%), Gaps = 5/154 (3%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV EK + +A G H L L+E ++A G N++GQLGI + S +P+R+ GL
Sbjct: 193 PVRVQGLEK--VMMIAVGAFHNLALSEDAVLWAWGNNEYGQLGIGDTQPRS-QPIRVEGL 249
Query: 122 KK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
+V I+ G HS+A+T DGE+Y WG+ +G+LG G + + +P KV+ L G
Sbjct: 250 SGLSLVDIAAGGWHSTALTKDGEVYAWGRGEHGRLGFGDDKSSHM-VPLKVQLLDGEDIV 308
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
Q + G SVA+T G++ S+G G GRLG+G++
Sbjct: 309 QVSCGGTHSVALTSDGRIFSYGRGDHGRLGYGRK 342
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 6/164 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG+LG+G + R +P+ SL +A GG H+ LT+ G VYA G + G+
Sbjct: 224 WGNNEYGQLGIGDTQPRSQPIRVEGLSGLSLVDIAAGGWHSTALTKDGEVYAWGRGEHGR 283
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ + PL++ L +++VQ+S G HS A+T DG ++ +G+ +G+LG G+K
Sbjct: 284 LGFGDDKSSHMVPLKVQLLDGEDIVQVSCGGTHSVALTSDGRIFSYGRGDHGRLGYGRKV 343
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK----VLSW 201
P+ + L T G Q+ V GG+ +++W
Sbjct: 344 TTGHPMEVPLN-LPPPKTSAGPDGLWQANFVACGGRHTLAIVTW 386
>gi|119626424|gb|EAX06019.1| hect domain and RLD 6, isoform CRA_b [Homo sapiens]
Length = 1028
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 140/309 (45%), Gaps = 42/309 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L + G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA------LSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
L+ ER+ G V Q+ CG HT A + G+
Sbjct: 281 LV---------------------------ERIDG-----LVSQIDCGSYHTLAYVHTTGQ 308
Query: 341 ILTWGWGGS 349
++++G G S
Sbjct: 309 VVSFGHGPS 317
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 123/282 (43%), Gaps = 56/282 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L +K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G HS + ++ +V ++WG N +G LG+G
Sbjct: 134 SCGHYHSLALSKDSQV------------------------------FSWGKNSHGQLGLG 163
Query: 304 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
SP+RV+ P+ QV+ G H+ A+S ++GWG +S G
Sbjct: 164 KEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLCGT-SFGWGS----------NSAG 211
Query: 363 QL---GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QL G V P V +N+ + +SCG HT L +
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQ 253
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ +I + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ G + G N G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAG 211
Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N+ S +PL + LK VV IS G H++ +T DG+++ +G N +GQLG
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
K P VE + G+ ++ + V G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317
>gi|145594132|ref|YP_001158429.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303469|gb|ABP54051.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 570
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 145/380 (38%), Gaps = 46/380 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G+LG G+ P+ S A+ G H+L LT G V A G ND GQ
Sbjct: 62 WGDNAFGQLGDGTTTGSNTPLPVSLPAGTDATAVVAGDFHSLALTSAGTVLAWGRNDSGQ 121
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S + + V ++ G+ HS A+T G + WG NS GQLG G +
Sbjct: 122 LGDGTTVSSSTPVVVRLPVGVTVTAVAAGFGHSLALTSTGVVLAWGSNSFGQLGDGTTVS 181
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P+ ++ G+ A G S+A+T G L+WG SG+LG G
Sbjct: 182 SSTPVAVRLPV--GVTVTAVAAGSGHSLALTSVGAALAWGNNFSGQLGDGT--------- 230
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM------------ 270
+ S TP ++ G V A G HS + G +G ++
Sbjct: 231 TVSSSTPVAVRLPVGTTVTAVAGGSHHSLALTSAGAALAWGGNFSGQLGDGTTVSSSTPV 290
Query: 271 ----------LFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
G A +L S G WGSN +G LG G+ P V P
Sbjct: 291 VVSLPVGTTVTALAGGDAHSVALTSAGAALAWGSNGDGQLGDGTNADSSVPIAVSLPAGA 350
Query: 321 SPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
+ + H AI S G L WG G GQLG G + D P V+
Sbjct: 351 TITAIAAHDGAHNLAITSTGAALAWGGNGD------------GQLGDGTNADSSVPIAVS 398
Query: 380 FGENVKALQVSCGFNHTGAL 399
++ H+ AL
Sbjct: 399 LPAGTTITAIAASVEHSLAL 418
>gi|281347459|gb|EFB23043.1| hypothetical protein PANDA_001337 [Ailuropoda melanoleuca]
Length = 1199
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 179/390 (45%), Gaps = 59/390 (15%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 18 SKFWFKNDIPAFLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSTVNKPTCVKALK 75
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQI 128
+K ACG HTL TE G VYA+G N+ GQLG+ + + S + ++++ Q+
Sbjct: 76 PEKVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQRKIKQL 135
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DGEL+MWG NS GQ+GL K + +P +V G + G+
Sbjct: 136 SAGSNTSAALTEDGELFMWGDNSEGQIGL--KNITNVCVPQQVTV--GKPISWISCGYYH 191
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G SG+LG ++ + R+ + + G+ K+ +
Sbjct: 192 SAFVTTEGELYTFGEPESGKLGLPKQLLV----------NHRMPQSVPGIPEKV-----V 236
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVL 308
AC G + ++AV YT+G + G LG+G+
Sbjct: 237 QVAC--GGGHTVVLTEKAV----------------------YTFGLGQFGQLGLGTFLFE 272
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
+V + + + CG HTA I++ G + T+G G HG LG
Sbjct: 273 TPVPKVIEHIKDLKISSIFCGENHTALITDLGLMYTFG-DGRHGKLG---------LGLE 322
Query: 368 NDVDYIHPTIV-NFGENVKALQVSCGFNHT 396
N + PT+ NF + L V+CG HT
Sbjct: 323 NFTNQFTPTLCSNFLRFIVQL-VACGGCHT 351
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 147/325 (45%), Gaps = 52/325 (16%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + +S G H++ +T + +LYM+G N+ GQLGLG
Sbjct: 7 FGKTKFAENI-----PSKFWFKNDIPAFLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGS 61
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K+ + PT V+ L K AA G ++ T GGKV + G G+LG G
Sbjct: 62 KS--TVNKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNS 119
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F + + R IK+L +AG SA + E+G ++++GD + ++ + +
Sbjct: 120 FHLISFFTSQRKIKQL--------SAGSNTSAALTEDGELFMWGDNSEGQIGLKNITNVC 171
Query: 280 RPSLI--------------------SGGELYTWGSNENGCLGI-GSIDVLHS-PERVQGP 317
P + + GELYT+G E+G LG+ + V H P+ V G
Sbjct: 172 VPQQVTVGKPISWISCGYYHSAFVTTEGELYTFGEPESGKLGLPKQLLVNHRMPQSVPG- 230
Query: 318 FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPT 376
V QV+CG HT ++E + T+G G GQLG G + + P
Sbjct: 231 -IPEKVVQVACGGGHTVVLTEKAVYTFGLG------------QFGQLGLGTFLFETPVPK 277
Query: 377 IVNFGENVKALQVSCGFNHTGALLE 401
++ +++K + CG NHT + +
Sbjct: 278 VIEHIKDLKISSIFCGENHTALITD 302
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + ++ +ACGG HTL
Sbjct: 309 FGDGRHGKLGLGLENFTNQFTPTLCSNFLRFIVQLVACGGCHTLVF 354
>gi|255562792|ref|XP_002522401.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223538286|gb|EEF39893.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1042
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 162/370 (43%), Gaps = 75/370 (20%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYH 133
+ACGG H + +T+ G +++ G G+LG I ++ ++G+ E+V + G +
Sbjct: 303 IACGGRHAVLVTKPGEIFSWGEESGGRLGHGIKADVPNPKLIDTLAGMNIELV--ACGEN 360
Query: 134 HSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
H+ A+T G+LY WG + G LG G +A+ IP + + GI + G + A
Sbjct: 361 HTCAVTFSGDLYTWGDGAYNCGLLGHGSEASHWIPKRIGGD-MEGIHVSYVSCGPWHTAA 419
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
VT G++ ++G G G LGHG SS PR ++ L G++ + G H+A
Sbjct: 420 VTSVGQLFTFGDGTFGALGHGDHSSAT---------VPREVETLRGLRTIRVSCGVWHTA 470
Query: 252 CIDE-----------------------NGRVYIFGDRAVDKMLFQEG------------- 275
E NG Y G + LF E
Sbjct: 471 AAVEITTESSSPGGSGSSTFGKLFTWGNGDEYRLGHGDKEPRLFPECVVALGDENICQVA 530
Query: 276 -NHARRPSLISGGELYTWGSNENGCLG----IGSIDVLHSPERVQGPFSESPVDQVSCGW 330
H +L + G +YT GS G LG G + P V+G + +++++CG
Sbjct: 531 CGHNLTLALTAAGRVYTMGSTSYGQLGNPRATGKV-----PAIVEGKIAGKIIEEIACGS 585
Query: 331 KHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 389
H A + S+ ++ TWG G + GQLGHG++ D PT+V+F + + V
Sbjct: 586 YHVAVLTSKAEVYTWGKG------------TNGQLGHGDNKDRNQPTVVDFLRDKQVRAV 633
Query: 390 SCGFNHTGAL 399
+CG N T +
Sbjct: 634 ACGSNFTAII 643
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 99/238 (41%), Gaps = 54/238 (22%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + A G +V VT G++ SWG GRLGHG ++ +
Sbjct: 288 LPKALESKVVLDVHYIACGGRHAVLVTKPGEIFSWGEESGGRLGHGIKADVPN------- 340
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
P+LI L G+ +++ A G H+ +
Sbjct: 341 --PKLIDTLAGMNIELVACGENHTCAV------------------------------TFS 368
Query: 287 GELYTWGSNENGC--LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILT 343
G+LYTWG C LG GS P+R+ G V VSCG HTAA+ S G++ T
Sbjct: 369 GDLYTWGDGAYNCGLLGHGSEASHWIPKRIGGDMEGIHVSYVSCGPWHTAAVTSVGQLFT 428
Query: 344 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+G GTF G LGHG+ P V ++ ++VSCG HT A +E
Sbjct: 429 FG----DGTF--------GALGHGDHSSATVPREVETLRGLRTIRVSCGVWHTAAAVE 474
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 72/145 (49%), Gaps = 6/145 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNGD RLG G E R P A ++ +ACG TL LT G VY G +GQ
Sbjct: 496 WGNGDEYRLGHGDKEPRLFPECVVALGDENICQVACGHNLTLALTAAGRVYTMGSTSYGQ 555
Query: 103 LGISENIGY--SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG G ++ +I+G K + +I+ G +H + +T E+Y WGK +NGQLG G
Sbjct: 556 LGNPRATGKVPAIVEGKIAG--KIIEEIACGSYHVAVLTSKAEVYTWGKGTNGQLGHGDN 613
Query: 161 AAKVIPIPTKVECLSGIFTKQAALG 185
+ PT V+ L + A G
Sbjct: 614 KDRN--QPTVVDFLRDKQVRAVACG 636
>gi|148703915|gb|EDL35862.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
gi|148703916|gb|EDL35863.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
Length = 560
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 115/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 132 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 191
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++G K V+ I+ G S A+ GE+Y+WG N NGQLGLG
Sbjct: 192 QVGSGSTANQPI-PRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS 250
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G++ +WGA G+LG G
Sbjct: 251 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGN------ 302
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y ++ E + + ++IAA H SA + G VY++G
Sbjct: 303 --KSNQSYPTPVVVEKDRI-IEIAACHSAHTSAAKTQGGHVYMWG 344
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 115/219 (52%), Gaps = 16/219 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG+G ++S P + + +L+ G G H + T G V+ G N + QLG +
Sbjct: 85 GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 143
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 144 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 201
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 202 PIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 252
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++ TP + L+G++V+ A G+ H+ + + G++Y +G
Sbjct: 253 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 291
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 145/348 (41%), Gaps = 62/348 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + I ++E
Sbjct: 39 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQSTIE 97
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T DGE++ WG N+ QLG G ++P
Sbjct: 98 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 157
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 158 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 207
Query: 233 K-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYT 291
L+ V A G + S +++ GE+Y
Sbjct: 208 TGCLQNKVVMNIACGQMCSM------------------------------AVVDTGEVYV 237
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSH 350
WG N NG LG+GS +P RV V +V+CG+ HT ++ EG+I WG
Sbjct: 238 WGYNGNGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQIYAWG----- 291
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 292 -------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 332
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 237 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 296
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 297 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 349
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 350 --SVILPHHTHFCCTDDVF 366
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 113/267 (42%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N +G LG+G + + P +++ L+G K A+L + V T
Sbjct: 71 TVNDEIFVLGTNCSGCLGVGDIQSTIEP--RRLDSLTG--KKIASLSYGSGPHIVLATTD 126
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 127 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLV--- 175
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 176 ---------------------------LTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 208
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG + A+ + G++ WG+ G+ GQLG G+ +
Sbjct: 209 GCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGN------------GQLGLGSSGNQPT 256
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 257 PCRVAALQGIRVQRVACGYAHTLVLTD 283
>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Papio anubis]
Length = 551
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + + P R++G K VV I+ G A+ GE+Y+WG N NGQLGLG
Sbjct: 183 QVGSGSTVNQPI-PRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGS 241
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 242 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 293
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y + E + + ++IAA H SA + G VY++G
Sbjct: 294 --KSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 116/226 (51%), Gaps = 16/226 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
+ G G LGLG ++S P + + +L+ G G H + T G V+ G N +
Sbjct: 69 VLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAY 128
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG + + L P +IS K+V++++ G +HS +T DGE++ WG N++GQ+G G
Sbjct: 129 SQLG-NGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSG 187
Query: 159 KKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ PIP +V CL A G +AV G+V WG G+G+LG G
Sbjct: 188 STVNQ--PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGS---- 241
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S ++ TP + L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 242 -----SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 154/368 (41%), Gaps = 67/368 (18%)
Query: 45 NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
+GD G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 9 SGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
G N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+
Sbjct: 69 VLGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNA 127
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QLG G ++P LS + A G S+ +T G+V +WG SG++G
Sbjct: 128 YSQLGNGTTNHGLVPCQISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G + ++ PR + + C+ V I A +M
Sbjct: 187 GS---------TVNQPIPRRV-----------------TGCLQNKVVVTI----ACGQMC 216
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 331
+++ GE+Y WG N NG LG+GS +P RV V +V+CG+
Sbjct: 217 CM--------AVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGYA 267
Query: 332 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 390
HT ++ EG++ WG +S GQLG GN + +PT V ++ +
Sbjct: 268 HTLVLTDEGQVYAWG------------ANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 315
Query: 391 CGFNHTGA 398
C HT A
Sbjct: 316 CHSTHTSA 323
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 112/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ LSG K A+L + V T
Sbjct: 62 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIASLSYGSGPHIVLATTE 117
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L + ++ + + + E+ A G HS
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEV--------ACGSYHSLV--- 166
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 167 ---------------------------LTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG A+ + G++ WG+ G+ GQLG G+ +
Sbjct: 200 GCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLGLGSSGNQPT 247
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTD 274
>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
Length = 1052
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 158/363 (43%), Gaps = 50/363 (13%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+LGLG +E+ P ++ +ACG HTLFLT G VYA G ND
Sbjct: 6 WGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNNDH 65
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + PL I L+ VV QI+ G HS A+T G++ WG N GQ+G
Sbjct: 66 HQLGHELP---TKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVG-HS 121
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
VI +P + L Q A G S+A+T G++ SWG+ G+LG +
Sbjct: 122 TDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDL-- 179
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P + + G+ + A G HS I ++ V+ +G ++ + +
Sbjct: 180 ----PHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRA 235
Query: 280 RPS----------------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
PS L + G ++T G+ G LG G + P R+
Sbjct: 236 YPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGVSNNEMIP-RMVIE 294
Query: 318 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
S + QV+CG +HT A+ S G++ ++G G S GQLG N + P
Sbjct: 295 LMGSTITQVACGNRHTLALVPSGGRVYSFGLGAS------------GQLGTRNTISQTLP 342
Query: 376 TIV 378
+V
Sbjct: 343 KVV 345
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 121/277 (43%), Gaps = 53/277 (19%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
LY WG S+GQLGLG + I +P+++E +Q A G ++ +T G+V + G
Sbjct: 3 LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGN 62
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+LGH + P I EL+ V A G HS + E G++ +G
Sbjct: 63 NDHHQLGHELPTK-----------RPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWG 111
Query: 264 DR----------------------AVDKMLFQEG---NHARRPSLISGGELYTWGSNENG 298
D V + + Q NH+ +L S GELY+WGSN G
Sbjct: 112 DNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSL--ALTSCGELYSWGSNIYG 169
Query: 299 CLGIGSI-DVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSE 355
LG+ S D+ HS P R+ P+ ++CG H+ IS+ + +GW
Sbjct: 170 QLGVQSPKDLPHSNAPLRLTTILG-IPLATIACGGNHSFLISKSSAV-FGW--------- 218
Query: 356 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
G ++ GQLG ++ + +P+ + + V+CG
Sbjct: 219 -GKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCG 254
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 277 HARRPSLISGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESP---VDQVSCGWKH 332
H L + G++Y G+N++ LG H P + P E V Q++CG +H
Sbjct: 45 HRHTLFLTANGQVYACGNNDHHQLG-------HELPTKRPLPIPELQAYVVIQIACGSRH 97
Query: 333 TAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNFGENVKALQVS 390
+ A++E G+IL+WG + GQ+GH D D I P I+ F + +Q++
Sbjct: 98 SMALTEWGQILSWG------------DNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIA 145
Query: 391 CGFNHTGAL 399
CG NH+ AL
Sbjct: 146 CGNNHSLAL 154
>gi|74144437|dbj|BAE36068.1| unnamed protein product [Mus musculus]
Length = 527
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 115/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 99 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++G K V+ I+ G S A+ GE+Y+WG N NGQLGLG
Sbjct: 159 QVGSGSTANQPI-PRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G++ +WGA G+LG G
Sbjct: 218 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGN------ 269
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y ++ E + + ++IAA H SA + G VY++G
Sbjct: 270 --KSNQSYPTPVVVEKDRI-IEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 115/219 (52%), Gaps = 16/219 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG+G ++S P + + +L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 111 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 168
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 169 PIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 219
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++ TP + L+G++V+ A G+ H+ + + G++Y +G
Sbjct: 220 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 258
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 145/348 (41%), Gaps = 62/348 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + I ++E
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQSTIE 64
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T DGE++ WG N+ QLG G ++P
Sbjct: 65 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 125 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 174
Query: 233 K-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYT 291
L+ V A G + S +++ GE+Y
Sbjct: 175 TGCLQNKVVMNIACGQMCSM------------------------------AVVDTGEVYV 204
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSH 350
WG N NG LG+GS +P RV V +V+CG+ HT ++ EG+I WG
Sbjct: 205 WGYNGNGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQIYAWG----- 258
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 259 -------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 299
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 264 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 --SVILPHHTHFCCTDDVF 333
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 113/267 (42%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N +G LG+G + + P +++ L+G K A+L + V T
Sbjct: 38 TVNDEIFVLGTNCSGCLGVGDIQSTIEP--RRLDSLTG--KKIASLSYGSGPHIVLATTD 93
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 94 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLV--- 142
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 143 ---------------------------LTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 175
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG + A+ + G++ WG+ G+ GQLG G+ +
Sbjct: 176 GCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGN------------GQLGLGSSGNQPT 223
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 224 PCRVAALQGIRVQRVACGYAHTLVLTD 250
>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
Length = 4839
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 136/301 (45%), Gaps = 46/301 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G ++ G +G+
Sbjct: 4068 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGR 4127
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4128 LGHGDSED-QLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4185
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+ + + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4186 -GSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4242
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4243 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4273
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ +++V+CG HT A S
Sbjct: 4274 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACGSAHTLAWSTS 4324
Query: 340 K 340
K
Sbjct: 4325 K 4325
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 138/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3135 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3192
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3193 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV-- 3249
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + + G+VY
Sbjct: 3250 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVY------------------- 3283
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3284 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3327
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 155/337 (45%), Gaps = 50/337 (14%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2965 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3024
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G ++A+T GK+ SWG G G+L
Sbjct: 3025 NGRLGLGISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKL 3083
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------ 263
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G
Sbjct: 3084 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134
Query: 264 -----------DRAVDKMLFQE-------GNHARRPSLISGGELYTWGSNENGCLGIGSI 305
+ V +L A+ +L G +++WG + G LG G
Sbjct: 3135 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3194
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 364
+ + P+ ++ + V Q+ CG + + A+++ G + TWG G +L
Sbjct: 3195 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3241
Query: 365 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GHG DV P +V K + V+ G H A+ +
Sbjct: 3242 GHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3278
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 170/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3962 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4019
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4020 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4077
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S +T G + +WG G GRLGHG
Sbjct: 4078 HGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD--- 4132
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4133 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4187 SDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4246
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4247 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4293
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4294 IQRPRLVAALQGKKINRVACGSAHTLA 4320
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 162/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3063 AMALTVDGKIFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3120
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3121 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3231
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG G+ + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3232 TWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWG---- 3286
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3287 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 133/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L+ G V++ G D G+LG + + EP IS L K VV I+ G +
Sbjct: 505 GHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE-EPKLISALSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ + G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + + G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ + PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRIT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + SA KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ +S +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V +WG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 152/353 (43%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ +G P + L
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYN-------SDTLG----PQLVQSL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A++ +GE++ WG G+LG G +P+ P + LSG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGD----TVPLEEPKLISALSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S + P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 595
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV + G GD A+ ++ G++
Sbjct: 596 MLVTGLKGLKVIDVSCGS---------------GD-------------AQTLAVTENGQV 627
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + + +V CG + + A++ +G++ TWG G
Sbjct: 628 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDIVKVRCGSQFSIALTKDGQVYTWGKGD 686
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 687 NQ------------RLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTE 727
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 114/258 (44%), Gaps = 52/258 (20%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2957 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVA---VHSG---- 3059
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3060 -------------------GRHAM--ALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIE 3098
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AAI S G++ TWG G G+LGHG++ +
Sbjct: 3099 A-LKTKRIRDIACGSSHSAAITSSGELYTWGLG------------EYGRLGHGDNTTQLK 3145
Query: 375 PTIVNFGENVKALQVSCG 392
P +V + +QV+CG
Sbjct: 3146 PKMVKVLLGHRVIQVACG 3163
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 89/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E + P++ + + + ++CG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ ++V++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 109/252 (43%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4015 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4057
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4058 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 4097
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD ++ G H+A I+ G + TWG G G+LGHG+ D + P +V
Sbjct: 4098 VVD-IAAGGAHSACITAAGDLFTWGKG------------RYGRLGHGDSEDQLKPKLVEA 4144
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 4145 LQGYRVIDIACG 4156
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
L G E++ Y P + GLK K+V+ ++ G H A+T D E++ WG N Q L
Sbjct: 690 LGHGTEEHVRY---PKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746
Query: 156 GLGKKAAKVIP 166
+ K +P
Sbjct: 747 RITKPEPAALP 757
>gi|282395057|ref|NP_598844.3| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|282396060|ref|NP_001164165.1| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|81880241|sp|Q99LJ7.1|RCBT2_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|13096854|gb|AAH03224.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Mus musculus]
gi|26327151|dbj|BAC27319.1| unnamed protein product [Mus musculus]
gi|148703914|gb|EDL35861.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Mus musculus]
gi|339779805|gb|AEK06433.1| RC/BTB2 [Mus musculus]
gi|339779807|gb|AEK06434.1| RC/BTB2 [Mus musculus]
Length = 551
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 115/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++G K V+ I+ G S A+ GE+Y+WG N NGQLGLG
Sbjct: 183 QVGSGSTANQPI-PRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS 241
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G++ +WGA G+LG G
Sbjct: 242 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGN------ 293
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y ++ E + + ++IAA H SA + G VY++G
Sbjct: 294 --KSNQSYPTPVVVEKDRI-IEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 115/219 (52%), Gaps = 16/219 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG+G ++S P + + +L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++ TP + L+G++V+ A G+ H+ + + G++Y +G
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 145/348 (41%), Gaps = 62/348 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + I ++E
Sbjct: 30 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQSTIE 88
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T DGE++ WG N+ QLG G ++P
Sbjct: 89 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 149 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198
Query: 233 K-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYT 291
L+ V A G + S +++ GE+Y
Sbjct: 199 TGCLQNKVVMNIACGQMCSM------------------------------AVVDTGEVYV 228
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSH 350
WG N NG LG+GS +P RV V +V+CG+ HT ++ EG+I WG
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQIYAWG----- 282
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 283 -------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 323
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHHTHFCCTDDVF 357
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 113/267 (42%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N +G LG+G + + P +++ L+G K A+L + V T
Sbjct: 62 TVNDEIFVLGTNCSGCLGVGDIQSTIEP--RRLDSLTG--KKIASLSYGSGPHIVLATTD 117
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLV--- 166
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 167 ---------------------------LTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG + A+ + G++ WG+ G+ GQLG G+ +
Sbjct: 200 GCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGN------------GQLGLGSSGNQPT 247
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTD 274
>gi|413946332|gb|AFW78981.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 1009
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 171/402 (42%), Gaps = 71/402 (17%)
Query: 14 LKQDIKLGSKLGIC-KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
L+ D+ L + C R I+ T ++ WG GRLG G+ RP + A +
Sbjct: 237 LESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSN 296
Query: 73 LKALACGGAHTLFLTETGCVYA--TGLNDFGQLGISENIGYSLEPLRISGLKK--EVVQI 128
++ +ACG HT +T +G +Y G + G LG + L P R+SG + +V+ +
Sbjct: 297 VEYVACGEFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWL-PKRVSGPLEGVQVLSV 355
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G HS+ T G+++ +G + G LG G + + P +VE LSG T + A G
Sbjct: 356 SCGSWHSALTTSSGKVFTFGDGTFGALGHGNR--HTVAYPKEVETLSGFRTIKVACGLWH 413
Query: 189 SVAVTG----------GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
S A+ K+ +WGAG LGHG + + L P ++ L
Sbjct: 414 SAAIVETTNQAGVNVISRKLFTWGAGDKNPLGHGDKDARL---------VPTCVQSLIDY 464
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENG 298
A G HS I +L + G ++T GS+ NG
Sbjct: 465 NFHQVACG--HSMTI----------------------------ALSTSGHVFTMGSSSNG 494
Query: 299 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDG 357
LG D H P VQ + V+++SCG H A + S ++ TWG G +
Sbjct: 495 QLGNPKSDGKH-PTPVQDRLAGELVEEISCGSCHVAVLTSRSEVYTWGMGAN-------- 545
Query: 358 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G+LGHG D PT+V ++ ++CG N T +
Sbjct: 546 ----GRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFTTCI 583
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 111/270 (41%), Gaps = 63/270 (23%)
Query: 142 GELYMWGKNSNGQLG-------LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
G++Y+WG+ + L KA +IP P + + + + +Q A G+ T
Sbjct: 203 GDVYVWGEVWTDMIPAEGSANYLCSKADILIPKPLESDVVLDV--QQIACGYRHIALTTR 260
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G+V +WG GRLGHG ++ I P+L++ L V+ A G H+ I
Sbjct: 261 QGEVFAWGEELGGRLGHGTDADI---------SRPKLVEALAVSNVEYVACGEFHTCAI- 310
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSN--ENGCLGIGSIDVLHSPE 312
+ G+LYTWG G LG G+ P+
Sbjct: 311 -----------------------------TASGDLYTWGDGYYNAGLLGHGAGTSHWLPK 341
Query: 313 RVQGPFSESPVDQVSCG-WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
RV GP V VSCG W S GK+ T+G GTF G LGHGN
Sbjct: 342 RVSGPLEGVQVLSVSCGSWHSALTTSSGKVFTFG----DGTF--------GALGHGNRHT 389
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+P V + ++V+CG H+ A++E
Sbjct: 390 VAYPKEVETLSGFRTIKVACGLWHSAAIVE 419
>gi|40018552|ref|NP_954515.1| RCC1 and BTB domain-containing protein 2 [Rattus norvegicus]
gi|81885332|sp|Q6P798.1|RCBT2_RAT RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|38197422|gb|AAH61766.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Rattus norvegicus]
gi|149049940|gb|EDM02264.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Rattus norvegicus]
Length = 551
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 115/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++G K V+ I+ G S A+ GE+Y+WG N NGQLGLG
Sbjct: 183 QVGSGSTANQPI-PRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS 241
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G++ +WGA G+LG G
Sbjct: 242 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGN------ 293
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y ++ E + + ++IAA H SA + G VY++G
Sbjct: 294 --KSNQSYPTPVVVEKDRI-IEIAACHSAHTSAAKSQGGHVYMWG 335
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 115/219 (52%), Gaps = 16/219 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG+G ++S P + + +L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++ TP + L+G++V+ A G+ H+ + + G++Y +G
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 145/348 (41%), Gaps = 62/348 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + I ++E
Sbjct: 30 KWPIFSLCSEEELQLIRQACVFGTAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQSTIE 88
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T DGE++ WG N+ QLG G ++P
Sbjct: 89 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 149 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198
Query: 233 K-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYT 291
L+ V A G + S +++ GE+Y
Sbjct: 199 TGCLQNKVVMSIACGQMCSM------------------------------AVVDTGEVYV 228
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSH 350
WG N NG LG+GS +P RV V +V+CG+ HT ++ EG+I WG
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQIYAWG----- 282
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 283 -------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 323
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 113/267 (42%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N +G LG+G + + P +++ L+G K A+L + V T
Sbjct: 62 TVNDEIFVLGTNCSGCLGVGDIQSTIEP--RRLDSLTG--KKIASLSYGSGPHIVLATTD 117
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLV--- 166
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 167 ---------------------------LTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG + A+ + G++ WG+ G+ GQLG G+ +
Sbjct: 200 GCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGN------------GQLGLGSSGNQPT 247
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTD 274
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A + G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFCCTDDVF 357
>gi|13699242|gb|AAK38372.1|AF334406_1 CLLL7 protein [Homo sapiens]
gi|14275565|emb|CAC40027.1| guanine nucleotide exchange factor [Homo sapiens]
gi|21756194|dbj|BAC04833.1| unnamed protein product [Homo sapiens]
gi|119629234|gb|EAX08829.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Homo sapiens]
Length = 531
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 139/300 (46%), Gaps = 47/300 (15%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P P
Sbjct: 114 QGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
TP V++AA LHS C+++ + G +A +L G
Sbjct: 223 TP----------VRVAA---LHSVCVNQ----IVCG-------------YAHTLALTDEG 252
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 345
LY WG+N G LG G+ + L SP + E V+ +C HT+A G + WG
Sbjct: 253 LLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 137/312 (43%), Gaps = 51/312 (16%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRK-VCVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 GLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V A G HS + +G V+ +G ++ G+ A +P+
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV S V+Q+
Sbjct: 180 IKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG ++ GQLG GN + + P + +
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHIMVEKERVV 287
Query: 387 LQVSCGFNHTGA 398
+C HT A
Sbjct: 288 EIAACHSAHTSA 299
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
>gi|47208715|emb|CAF91945.1| unnamed protein product [Tetraodon nigroviridis]
Length = 380
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 169/398 (42%), Gaps = 67/398 (16%)
Query: 44 GNGDYGRLGLGSLESRWRPVVC--SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
G YG+LG G +E R P +C + + +++ +A GG HT +T G V+ G N G
Sbjct: 1 GANSYGQLGHGDVEDRSAPRLCDTAPLKDGAVRVVAGGGGHTAVITGDGEVFVCGQNHRG 60
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+ S R L V ++ G+ + +T G + G N+ GQLG+G+K
Sbjct: 61 QLGLGHLADISAL-QRCPSLTHTVTNVTCGWDFTLFLTDSGRVLSCGSNAFGQLGIGQKP 119
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG----GSGRLGHGQESSI 217
+ VE L AA G ++AVT G+V WG G LG SS+
Sbjct: 120 NFTAEVQV-VESLKAAVVSVAA-GLRHALAVTDSGRVYQWGRGLLSQAKRTLG---PSSV 174
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD----RAVDKMLFQ 273
L ST P + L+ ++ AG +H C+ E+G ++++G + V + F
Sbjct: 175 PPHLGST---VPSPVPGLDQKTSRMVTAGSMHCVCLTEDGDLFLWGSNKHGQLVSRDPFL 231
Query: 274 EGNHARRPSLISG-------------------GELYTWGSNENGCLGIGSIDVLHSPER- 313
+ SL+ G G ++TWG G LG + SPE
Sbjct: 232 SSAMPVKRSLLGGERVGGVWSGWTHIIAQTETGRVFTWGRGNYGQLGRPA-PTSRSPESR 290
Query: 314 --VQGPFSES--PVD--------QVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSG 361
G E+ P + Q++CG +H AI G++L+WGW +
Sbjct: 291 STTDGANLEAGLPAEVKALQGATQIACGSEHNLAILAGRLLSWGW------------NEH 338
Query: 362 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G G G+ D P +V ++ L + CG H+ A+
Sbjct: 339 GMCGDGSHTDVRQPQLV---PALRPLLIGCGAGHSMAV 373
>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
Length = 3840
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 144/317 (45%), Gaps = 56/317 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 1943 WGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 2002
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L + V+Q++ G + A+T DG ++ WG G+LG G
Sbjct: 2003 LGHGDN-ATQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRGG 2061
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 2062 SEGS--DTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 2117
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ I L G +V A G LH C+
Sbjct: 2118 -------RKPQPIGGLRGRRVIHVAVGALH--CL-------------------------- 2142
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
++ G++Y WG N++G G G+ V P V G V++V+CG H+ A
Sbjct: 2143 --AVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG-LDAVFVNRVACGSSHSIA---- 2195
Query: 340 KILTWGWGGSHGTFSED 356
WG + T E+
Sbjct: 2196 ------WGLPNATLEEE 2206
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 176/387 (45%), Gaps = 57/387 (14%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 2982 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 3039
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ +++ P + L+ V+ +++G H A+T +GE+Y WG+ +G+LG
Sbjct: 3040 GRLGVGGADSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 3098
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 3099 GNRMS--YDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 3152
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 3153 -----SEDQLRPQLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 3207
Query: 276 NHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + P +L G +YTW + LG GS+D + P++
Sbjct: 3208 DGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWSKGDFHRLGHGSVDHVRRPKK 3267
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V + ++ G H A S+ G++ TW G + GQLG G
Sbjct: 3268 VAA-LQGKKIISIATGSLHCVACSDSGEVYTW------------GDNDEGQLGDGTVTAI 3314
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGAL 399
P +V + ++V+CG HT AL
Sbjct: 3315 QRPRLVAALQGKHIVKVTCGSAHTLAL 3341
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 133/303 (43%), Gaps = 48/303 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + ++ +ACG AH+ +T +G V G +G+
Sbjct: 3088 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGR 3147
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + + +G + IT D ++ WG G+LG G
Sbjct: 3148 LGHGDSED-QLRPQLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 3205
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +W G RLGHG +
Sbjct: 3206 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWSKGDFHRLGHGSVDHV-- 3262
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P+ + L+G K+ A G LH AC D
Sbjct: 3263 -------RRPKKVAALQGKKIISIATGSLHCVACSD------------------------ 3291
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
GE+YTWG N+ G LG G++ + P R+ + +V+CG HT A+S
Sbjct: 3292 -------SGEVYTWGDNDEGQLGDGTVTAIQRP-RLVAALQGKHIVKVTCGSAHTLALST 3343
Query: 339 GKI 341
++
Sbjct: 3344 SQL 3346
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 157/349 (44%), Gaps = 54/349 (15%)
Query: 79 GGAHTLFLT-ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF+ + G VYA G G+LG+ L P ++ L + VV+ + +G H
Sbjct: 1872 GGSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 1930
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+T+DG+++ WG+ +G+LG G + + P VE L + A G S A++
Sbjct: 1931 ALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVETLRSKKIRDVACGSSHSAAISS 1988
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG ++ L P+L+ L G +V A G +
Sbjct: 1989 QGELYTWGLGEYGRLGHGDNATQL---------KPKLVAALAGRRVIQVACGSRDAQTLA 2039
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRP----------------------SLISGGELY 290
+ E+G V+ +GD K+ + P +L GE++
Sbjct: 2040 LTEDGSVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVW 2099
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG G + P+ + G V V+ G H A+++ G++ WG
Sbjct: 2100 TWGKGDYYRLGHGGDQHVRKPQPIGG-LRGRRVIHVAVGALHCLAVTDAGQVYAWG---- 2154
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G GN P +V + V +V+CG +H+ A
Sbjct: 2155 -----DNDH---GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 2195
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 150/351 (42%), Gaps = 79/351 (22%)
Query: 92 VYATGLNDFGQLG-----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
V GLND QLG S+ I L P+ I+G K + +
Sbjct: 1834 VMVWGLNDKEQLGGLKGSKVKVPTFSQTIS-RLRPIHIAGGSKSLFIVGQ---------- 1882
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
+G++Y G+ +NG+LGLG +P+P ++ L K+ A+ G + ++A+T GKV
Sbjct: 1883 NGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 1940
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG +++ PRL++ L K++ A G HSA I G
Sbjct: 1941 FSWGEGEDGKLGHGNRTTL---------DKPRLVETLRSKKIRDVACGSSHSAAISSQGE 1991
Query: 259 VYIF----------GDRAVD-----------KMLFQEG---NHARRPSLISGGELYTWGS 294
+Y + GD A + + Q A+ +L G +++WG
Sbjct: 1992 LYTWGLGEYGRLGHGDNATQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGSVFSWGD 2051
Query: 295 NENGCLGIG---SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 350
+ G LG G D H ER+ G V Q+ CG + + A++ G++ TWG G +
Sbjct: 2052 GDFGKLGRGGSEGSDTPHEIERLSG----IGVIQIECGAQFSLALTRAGEVWTWGKGDYY 2107
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHG D P + + + V+ G H A+ +
Sbjct: 2108 ------------RLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTD 2146
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 123/335 (36%), Gaps = 105/335 (31%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG------------------ 185
+Y WG N GQLG G + ++ I PT E LS + Q A G
Sbjct: 2979 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 3036
Query: 186 --------------------------FEQSVAVTGGGK----------VLSWGAGGSGRL 209
F + VAV GGK V +WG G G+L
Sbjct: 3037 GSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 3096
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S P+L++ L G+ V A G HSA I +G V +G +
Sbjct: 3097 GHGNRMSY---------DRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGR 3147
Query: 270 MLFQEGNHARRPSLISG------------------------GELYTWGSNENGCLGIGSI 305
+ + RP L+ +++WG + G LG G
Sbjct: 3148 LGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 3207
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 364
D P +++ + V +V CG + + A+++ G + TW G H +L
Sbjct: 3208 DGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTWSKGDFH------------RL 3254
Query: 365 GHGNDVDYI-HPTIVNFGENVKALQVSCGFNHTGA 398
GHG+ VD++ P V + K + ++ G H A
Sbjct: 3255 GHGS-VDHVRRPKKVAALQGKKIISIATGSLHCVA 3288
>gi|301094633|ref|XP_002896421.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262109510|gb|EEY67562.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 1289
Score = 108 bits (269), Expect = 5e-21, Method: Composition-based stats.
Identities = 108/400 (27%), Positives = 162/400 (40%), Gaps = 90/400 (22%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS-------- 112
RP S + +ACGG H L+LT TG VY+ G N+ ++ ++
Sbjct: 467 RPKHVSLANGQPIVQVACGGEHLLYLTSTGDVYSYGDNEDKKVAAVTVATHTSTLPDNES 526
Query: 113 ---------LEPLRISGLKKE-------VVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
L P + L E + ++ G HS AIT GELY WG +G+LG
Sbjct: 527 TRVVSTSSFLAPHLVEELALEKALHRTTIAMVACGAQHSLAITDAGELYTWGSGEDGRLG 586
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES- 215
G + +P KV L A+ G + +T G V ++G G +GRLG G
Sbjct: 587 HGDMRDRAVP--RKVMSLLRESVVSASCGGAHTAVLTAKGSVFTFGRGRNGRLGLGDNKW 644
Query: 216 -----SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD------ 264
I+GF + TS + + G+ +A +D G V+ +G
Sbjct: 645 RDTPHPIVGFPQGTS--------------ISLVVCGWNFTAALDRQGSVFTWGKTGEGQC 690
Query: 265 ------------RAVDKMLFQEGN--------HARRPSLISGGELYTWGSNENGCLGIGS 304
R VDK+ G+ + L + GELY+WG E G LG G
Sbjct: 691 GLGYVDRDQVVPRCVDKLRDVAGSSVVDVACGYTHTVVLTASGELYSWGLGEYGQLGTG- 749
Query: 305 IDVLHS-PERVQGPF----SESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHS 359
DV P RVQ P + + +V CG H+ A +E +++ + W G +
Sbjct: 750 -DVYQPLPARVQLPADALCAPDQLARVYCGAFHSIATTEQRVM-FAW----------GLN 797
Query: 360 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
S G G G+ + P ++ + L V+CG +T AL
Sbjct: 798 SYGACGLGHTANKDKPERIDCFSSQTELVVACGHKYTIAL 837
Score = 102 bits (255), Expect = 3e-19, Method: Composition-based stats.
Identities = 82/298 (27%), Positives = 130/298 (43%), Gaps = 41/298 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ GRLG G + R P + + S+ + +CGGAHT LT G V+ G G+
Sbjct: 577 WGSGEDGRLGHGDMRDRAVPRKVMSLLRESVVSASCGGAHTAVLTAKGSVFTFGRGRNGR 636
Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK- 159
LG+ +N + P I G + + + G++ ++A+ G ++ WGK GQ GLG
Sbjct: 637 LGLGDN-KWRDTPHPIVGFPQGTSISLVVCGWNFTAALDRQGSVFTWGKTGEGQCGLGYV 695
Query: 160 KAAKVIP-IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+V+P K+ ++G A G+ +V +T G++ SWG G G+LG G
Sbjct: 696 DRDQVVPRCVDKLRDVAGSSVVDVACGYTHTVVLTASGELYSWGLGEYGQLGTG------ 749
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
Y P +V++ A D+ RVY ++
Sbjct: 750 ------DVYQPL------PARVQLPADAL---CAPDQLARVYCGAFHSI----------- 783
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 336
+ ++ WG N G G+G PER+ FS V+CG K+T A+
Sbjct: 784 ---ATTEQRVMFAWGLNSYGACGLGHTANKDKPERIDC-FSSQTELVVACGHKYTIAL 837
Score = 67.8 bits (164), Expect = 9e-09, Method: Composition-based stats.
Identities = 74/279 (26%), Positives = 118/279 (42%), Gaps = 37/279 (13%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+VV++ G + +Y+WG+ + + G ++ P V +G Q A
Sbjct: 429 DVVELEEGDDATQVEEPSSCMYVWGRPPSLEGG-----TPLVLRPKHVSLANGQPIVQVA 483
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E + +T G V S+G ++ + +T T + + E +V ++
Sbjct: 484 CGGEHLLYLTSTGDVYSYG--------DNEDKKVAAVTVATHTST---LPDNESTRV-VS 531
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ FL ++E R M+ H+ ++ GELYTWGS E+G LG G
Sbjct: 532 TSSFLAPHLVEELALEKAL-HRTTIAMVACGAQHSL--AITDAGELYTWGSGEDGRLGHG 588
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 362
+ P +V ES V SCG HTA ++ +G + T+G G G
Sbjct: 589 DMRDRAVPRKVMSLLRESVV-SASCGGAHTAVLTAKGSVFTFGRG------------RNG 635
Query: 363 QLGHGNDV--DYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+LG G++ D HP IV F + V CG+N T AL
Sbjct: 636 RLGLGDNKWRDTPHP-IVGFPQGTSISLVVCGWNFTAAL 673
Score = 65.9 bits (159), Expect = 3e-08, Method: Composition-based stats.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 19/182 (10%)
Query: 24 LGICKRWISSTLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEK------HSLKAL 76
L +C ++ L R+ + WG G+ GLG ++ VV +K S+ +
Sbjct: 662 LVVCGWNFTAALDRQGSVFTWGKTGEGQCGLGYVDRD--QVVPRCVDKLRDVAGSSVVDV 719
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS------GLKKEVVQIST 130
ACG HT+ LT +G +Y+ GL ++GQLG + Y P R+ ++ ++
Sbjct: 720 ACGYTHTVVLTASGELYSWGLGEYGQLGTGDV--YQPLPARVQLPADALCAPDQLARVYC 777
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G HS A T ++ WG NS G GLG A K P +++C S A G + ++
Sbjct: 778 GAFHSIATTEQRVMFAWGLNSYGACGLGHTANK--DKPERIDCFSSQTELVVACGHKYTI 835
Query: 191 AV 192
A+
Sbjct: 836 AL 837
>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Papio anubis]
gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
Length = 556
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 187
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + + P R++G K VV I+ G A+ GE+Y+WG N NGQLGLG
Sbjct: 188 QVGSGSTVNQPI-PRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGS 246
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 247 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 298
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y + E + + ++IAA H SA + G VY++G
Sbjct: 299 --KSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 340
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 116/226 (51%), Gaps = 16/226 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
+ G G LGLG ++S P + + +L+ G G H + T G V+ G N +
Sbjct: 74 VLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAY 133
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG + + L P +IS K+V++++ G +HS +T DGE++ WG N++GQ+G G
Sbjct: 134 SQLG-NGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSG 192
Query: 159 KKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ PIP +V CL A G +AV G+V WG G+G+LG G
Sbjct: 193 STVNQ--PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGS---- 246
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S ++ TP + L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 247 -----SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 146/347 (42%), Gaps = 60/347 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 35 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 93
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 94 PRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTN 153
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 154 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPIPRRV 203
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW 292
+ C+ V I A +M +++ GE+Y W
Sbjct: 204 -----------------TGCLQNKVVVTI----ACGQMCCM--------AVVDTGEVYVW 234
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 351
G N NG LG+GS +P RV V +V+CG+ HT ++ EG++ WG
Sbjct: 235 GYNGNGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWG------ 287
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 288 ------ANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA 328
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 233 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 292
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 293 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 345
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 346 --SVILPHLTHFSCTDDVF 362
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 112/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ LSG K A+L + V T
Sbjct: 67 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIASLSYGSGPHIVLATTE 122
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L + ++ + + + E+ A G HS
Sbjct: 123 GEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEV--------ACGSYHSLV--- 171
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 172 ---------------------------LTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 204
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG A+ + G++ WG+ G+ GQLG G+ +
Sbjct: 205 GCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLGLGSSGNQPT 252
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 253 PCRVAALQGIRVQRVACGYAHTLVLTD 279
>gi|395543395|ref|XP_003773604.1| PREDICTED: secretion-regulating guanine nucleotide exchange factor
[Sarcophilus harrisii]
Length = 612
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 143/310 (46%), Gaps = 46/310 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG E P + F + LK L GG H+ +T+ G ++ GLN G
Sbjct: 194 WGANSYGQLGLGHKEDVLEPQRLNDFCDPKRLKLLTGGGGHSAVVTDEGELFVCGLNKDG 253
Query: 102 QLGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG+ +E++ + ++G V+Q+S G+ + +T +G++ G NS GQLGL
Sbjct: 254 QLGLGHTEDVLSFIPCTPLAGCP--VLQVSCGWDFTILLTENGQVLSCGSNSFGQLGLPP 311
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSI 217
+ + IP +E L+ AA G ++A T G V WG G +GR E ++
Sbjct: 312 GTKRQV-IPQVIELLNEKVVCIAA-GMRHALAATESGLVFQWGTGLASTGRR-TCPEKTL 368
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
FL + P + LE KVK AG HSA + + G
Sbjct: 369 PPFLTAKE---PCQVTGLENSKVKTVVAGSCHSASLTDEG-------------------- 405
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG-PFSESPVDQVSCGWKHTAAI 336
ELY WGSN++G L + L +P++++ F V V GW H A
Sbjct: 406 ----------ELYVWGSNKHGQL-LSPAAFLPTPQKIEAHCFQNEKVTMVWSGWTHLVAR 454
Query: 337 SE-GKILTWG 345
+E GK+ TWG
Sbjct: 455 TETGKVFTWG 464
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 147/366 (40%), Gaps = 61/366 (16%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
G+LGLG E + C+ + ++CG T+ LTE G V + G N FGQLG+
Sbjct: 253 GQLGLGHTEDVLSFIPCTPLAGCPVLQVSCGWDFTILLTENGQVLSCGSNSFGQLGLPPG 312
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA--KVIP 166
+ P I L ++VV I+ G H+ A T G ++ WG G G++ K +P
Sbjct: 313 TKRQVIPQVIELLNEKVVCIAAGMRHALAATESGLVFQWG---TGLASTGRRTCPEKTLP 369
Query: 167 I------PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P +V L K G S ++T G++ WG+ HGQ S F
Sbjct: 370 PFLTAKEPCQVTGLENSKVKTVVAGSCHSASLTDEGELYVWGSN-----KHGQLLSPAAF 424
Query: 221 LRSTSEYTPRLIKE--LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
L TP+ I+ + KV + +G+ H E G+V+ +G ++
Sbjct: 425 L-----PTPQKIEAHCFQNEKVTMVWSGWTHLVARTETGKVFTWG----------RADYG 469
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES-P----VDQVSCGWKHT 333
+ + + G E T G ++L S R S P V +++CG +H
Sbjct: 470 QLGTKVDGQERCT-----------GDHELLLSCTRTLATMPSSLPCLEGVTEMACGSEHN 518
Query: 334 AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 393
A+ +WGW + G G G +V+ P V L V CG
Sbjct: 519 LAVVGSSCYSWGW------------NEHGMCGDGTEVNVWVPKPVESPSLALCLLVGCGA 566
Query: 394 NHTGAL 399
H+ A+
Sbjct: 567 GHSLAV 572
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 19/151 (12%)
Query: 42 LWGNGDYGRL-GLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+WG+ +G+L + + + F+ + + G H + TETG V+ G D+
Sbjct: 409 VWGSNKHGQLLSPAAFLPTPQKIEAHCFQNEKVTMVWSGWTHLVARTETGKVFTWGRADY 468
Query: 101 GQLG----------------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
GQLG +S + P + L+ V +++ G H+ A+ V
Sbjct: 469 GQLGTKVDGQERCTGDHELLLSCTRTLATMPSSLPCLEG-VTEMACGSEHNLAV-VGSSC 526
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
Y WG N +G G G + +P P + L+
Sbjct: 527 YSWGWNEHGMCGDGTEVNVWVPKPVESPSLA 557
>gi|242077750|ref|XP_002448811.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
gi|241939994|gb|EES13139.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
Length = 879
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 146/334 (43%), Gaps = 50/334 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ + ++P + + +++ +ACG HT +T TG +Y G ++
Sbjct: 102 WGEECSGRLGHGTGTNVFQPRLVESLSICNVELIACGEFHTCAVTATGDLYTWGDGTHNA 161
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG N+ + + P R+SG V +S G H++ IT G+LY +G + G LG G
Sbjct: 162 GLLGHGSNVSHWI-PKRVSGPLDGLPVSTVSCGTWHTALITSSGQLYTFGDGTFGVLGHG 220
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---------GGGKVLSWGAGGSGRL 209
+A+ P +VE L G+ T + G + AV GK+ +WG G RL
Sbjct: 221 NRAS--CSYPKEVESLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRL 278
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG SS L P I L AA G + + +G ++ G +V
Sbjct: 279 GHGDRSSKL---------KPTCIPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGS-SVYG 328
Query: 270 MLFQEGNHARRPSLI-----------------------SGGELYTWGSNENGCLGIGSID 306
L N R P L+ + GE+YTWG NG LG G I
Sbjct: 329 QLGNPNNDGRYPRLVEEQLGGGGVVEVACGSYHVAVLTNAGEVYTWGKGANGRLGHGDIA 388
Query: 307 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
P V+ + V +V+CG TAAI + K
Sbjct: 389 DRKVPTLVEA-LRDRSVKRVACGSSFTAAICQHK 421
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 123/272 (45%), Gaps = 60/272 (22%)
Query: 142 GELYMWGK---NSNGQLGLGKKA-----AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G++Y+WG+ ++ + G + A + +P +E + A G + + VT
Sbjct: 35 GDIYVWGEVICDTISRSGSDRSAYSPGTTTDVLVPKPLESNVMLDVSYVACGVKHAALVT 94
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
+V +WG SGRLGHG +++ + PRL++ L V++ A G H+ +
Sbjct: 95 RQSEVFTWGEECSGRLGHGTGTNV---------FQPRLVESLSICNVELIACGEFHTCAV 145
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH-SPE 312
G +Y +GD G++ G LG GS +V H P+
Sbjct: 146 TATGDLYTWGD----------------------------GTHNAGLLGHGS-NVSHWIPK 176
Query: 313 RVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
RV GP PV VSCG HTA I S G++ T+G GTF G LGHGN
Sbjct: 177 RVSGPLDGLPVSTVSCGTWHTALITSSGQLYTFG----DGTF--------GVLGHGNRAS 224
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
+P V + ++ + VSCG HT A++E +
Sbjct: 225 CSYPKEVESLKGLRTISVSCGVWHTAAVVEVI 256
>gi|440800160|gb|ELR21203.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 417
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 164/380 (43%), Gaps = 54/380 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCVY---ATGLND 99
G G +LG+G LE PV S A G LT +Y ++G+
Sbjct: 59 GTGRNAQLGVGDLEDYQLPVPVQELPVGASYIDAAAGWTQNFLLTTRHELYYWGSSGVYA 118
Query: 100 FGQLGISENIGYSL--EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+ + I Y EP + G +V+I TG H A++ +GE+Y+WG + GQ GL
Sbjct: 119 LLPMRRDKRIYYPTLCEPAQSLG----IVKIRTGRQHGIALSKNGEVYIWGNSEFGQTGL 174
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G K A+ +PI ++E + G + S AV+ G+V +WG G G+LGH
Sbjct: 175 GNKEAQHLPI--RMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLGHNG---- 228
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN-GRVYIFGDRAVDKMLFQEGN 276
+ E P+ + + G + G + ++E GR++ FG+ ++ E
Sbjct: 229 -----TEDELKPKELTVIRGEGISRVTCGTDFTGLLNETEGRLFTFGNGEAGQLGHGERG 283
Query: 277 HARRPSLIS-------------------GGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
PS++ G+ ++WG E+G LG G+ + PE +
Sbjct: 284 LCLEPSVVPLDNVKEVAAGGAHMLALTKDGQAWSWGWGEDGRLGHGATEDFLKPEPIPTL 343
Query: 318 FSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 376
V VS G H+ A++E G++ WG+ S G+LG GN+ + PT
Sbjct: 344 GPAVGVVSVSAGGGHSLALTESGQVYGWGFNAS------------GRLGLGNESSVMTPT 391
Query: 377 IVNFGENVKALQVSCGFNHT 396
++ + + L+ CG +H+
Sbjct: 392 LIKALADKRVLRAICGLDHS 411
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 134/300 (44%), Gaps = 49/300 (16%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WGN ++G+ GLG+ E++ P+ F S+ ++CG H+ +++ G V+ G G
Sbjct: 163 IWGNSEFGQTGLGNKEAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDG 222
Query: 102 QLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAIT-VDGELYMWGKNSNGQLGLGK 159
QLG L+P ++ ++ E + +++ G + + +G L+ +G GQLG G+
Sbjct: 223 QLG-HNGTEDELKPKELTVIRGEGISRVTCGTDFTGLLNETEGRLFTFGNGEAGQLGHGE 281
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + P ++ + K+ A G +A+T G+ SWG G GRLGHG L
Sbjct: 282 RGLCLEPSVVPLDNV-----KEVAAGGAHMLALTKDGQAWSWGWGEDGRLGHGATEDFL- 335
Query: 220 FLRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P I L V V +AG HS + E+G+V
Sbjct: 336 --------KPEPIPTLGPAVGVVSVSAGGGHSLALTESGQV------------------- 368
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
Y WG N +G LG+G+ + +P ++ ++ V + CG H+ I++
Sbjct: 369 -----------YGWGFNASGRLGLGNESSVMTPTLIKA-LADKRVLRAICGLDHSLFITQ 416
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 107/259 (41%), Gaps = 53/259 (20%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y G N QLG+G +P+P + E G AA G+ Q+ +T ++ WG+
Sbjct: 55 VYTCGTGRNAQLGVGDLEDYQLPVPVQ-ELPVGASYIDAAAGWTQNFLLTTRHELYYWGS 113
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G ++L R Y P L + + + + G H + +NG VYI
Sbjct: 114 SGV--------YALLPMRRDKRIYYPTLCEPAQSLGIVKIRTGRQHGIALSKNGEVYI-- 163
Query: 264 DRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
WG++E G G+G+ + H P R++ F + +
Sbjct: 164 ----------------------------WGNSEFGQTGLGNKEAQHLPIRMEF-FRDKSI 194
Query: 324 DQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 382
VSCG H+AA+S +G++ TWG+G GQLGH D + P +
Sbjct: 195 VDVSCGLDHSAAVSKDGRVWTWGYG------------IDGQLGHNGTEDELKPKELTVIR 242
Query: 383 NVKALQVSCGFNHTGALLE 401
+V+CG + TG L E
Sbjct: 243 GEGISRVTCGTDFTGLLNE 261
>gi|74190775|dbj|BAE28179.1| unnamed protein product [Mus musculus]
Length = 370
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 142/313 (45%), Gaps = 52/313 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG E + P S F + +K++ GG H+ +T+ G ++ GLN G
Sbjct: 20 WGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLNKDG 79
Query: 102 QLGISENIGYSLEPLRISGLKK----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG +G++ E LR + K + Q++ G+ + +T G++ G N+ GQLG+
Sbjct: 80 QLG----LGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGV 135
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSG-RLGHGQE 214
K + +P +ECL AA G ++A T G V WG G SG RL GQ
Sbjct: 136 PHGPRKCV-VPQAIECLREKVVCVAA-GLRHALATTATGSVFQWGTGLASSGRRLCPGQN 193
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ FL + P + LE A AG HSA
Sbjct: 194 LPL--FLTAKE---PSRVTGLENSTAVCAVAGSDHSA----------------------- 225
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHT 333
SL GELY WG N++G L ++ L P+R++ F + V V GW H
Sbjct: 226 -------SLTDTGELYVWGRNKHGQLASRAV-FLPLPQRIEAHYFQDEKVTAVWSGWTHL 277
Query: 334 AAISE-GKILTWG 345
A +E GK+ TWG
Sbjct: 278 VAKTETGKVFTWG 290
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 101/276 (36%), Gaps = 63/276 (22%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S ++ L+ WG NS GQLGLG K +P C +G K G S VT
Sbjct: 8 SETVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCI-KSVTGGGGHSAVVTD 66
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
GG + G G+LG G +L F + K L G ++ A G+ + +
Sbjct: 67 GGDLFVCGLNKDGQLGLGHTEEVLRFT---------ICKPLRGCPIRQVACGWDFTIMLT 117
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
E G+V G A G + V H P +
Sbjct: 118 EKGQVLSCGSNA-----------------------------------FGQLGVPHGPRKC 142
Query: 315 QGPFS-ESPVDQVSC---GWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 369
P + E ++V C G +H A + G + WG G + SSG +L G +
Sbjct: 143 VVPQAIECLREKVVCVAAGLRHALATTATGSVFQWGTGLA---------SSGRRLCPGQN 193
Query: 370 VDYI----HPTIVNFGENVKALQVSCGFNHTGALLE 401
+ P+ V EN A+ G +H+ +L +
Sbjct: 194 LPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTD 229
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 75/174 (43%), Gaps = 24/174 (13%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P + E + G H+ LT+TG +Y G N GQL S + L P RI
Sbjct: 202 EPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLA-SRAVFLPL-PQRIEA 259
Query: 121 ---LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL---GKKAAKVIP-------- 166
++V + +G+ H A T G+++ WG+ GQLG +A K +
Sbjct: 260 HYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQ 319
Query: 167 -----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+P+ + CL+G + + G E ++AV K SWG G G G ES
Sbjct: 320 GPQNSVPSPLHCLTG--ATEISCGSEHNLAVIRD-KCCSWGWNEHGMCGDGTES 370
>gi|198420568|ref|XP_002123770.1| PREDICTED: similar to guanine nucleotide exchange factor p532,
partial [Ciona intestinalis]
Length = 2540
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 161/336 (47%), Gaps = 51/336 (15%)
Query: 44 GNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLN 98
G G YGRLGLG + +S + +V +++ ++ HTL LT GC+++ G
Sbjct: 340 GKGSYGRLGLGDSNNQSTLKTIVFDP--PQTIRKISSSKGSDGHTLALTTEGCIFSWGDG 397
Query: 99 DFGQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
D+G+LG ++ + P I G ++ VV +S GY HS+ +T +G+L+ WG+ G+LG
Sbjct: 398 DYGKLGHGSSLTHK-SPKIIEGPLARRIVVCVSAGYRHSACVTQEGQLFTWGEGDYGRLG 456
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQES 215
LG ++ +P+ K +G G ++ + G V S+GAG +G+LGHG S
Sbjct: 457 LGDNTSRNVPVLVKDIASAG----SVVCGSSHTLVLAQDGLTVWSFGAGDNGKLGHGDTS 512
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA--------- 266
+ Y P++I+ + G+ AG +S ++++G+V+ +G A
Sbjct: 513 RV---------YRPKVIESINGMMFYKLCAGSQYSLALNDSGQVFSWGCGACLGCGSPDA 563
Query: 267 --VDKMLFQEGNHARRPSLISG----------GELYTWGSNENGCLGIGSID-VLHSPER 313
+ L E R + SG E+Y WG+N G G+G + + P +
Sbjct: 564 TFMKPTLIDELTFTRVVDITSGDGHCMALTHNNEVYCWGNNAMGQCGLGHTNSPISVPTQ 623
Query: 314 VQGPFSESPVDQVSCGWKH----TAAISEGKILTWG 345
VQ + + Q+S G H TA S+ +++W
Sbjct: 624 VQQ-LNNVTIHQISAGTSHSIAYTAMPSDRHVISWS 658
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 92/236 (38%), Gaps = 58/236 (24%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV---------- 92
WG GDYGRLGLG SR PV+ S ++ CG +HTL L + G
Sbjct: 447 WGEGDYGRLGLGDNTSRNVPVLVKDIA--SAGSVVCGSSHTLVLAQDGLTVWSFGAGDNG 504
Query: 93 --------------------------------YATGLNDFGQ---------LGISENIGY 111
Y+ LND GQ LG
Sbjct: 505 KLGHGDTSRVYRPKVIESINGMMFYKLCAGSQYSLALNDSGQVFSWGCGACLGCGSPDAT 564
Query: 112 SLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
++P I L VV I++G H A+T + E+Y WG N+ GQ GLG + I +PT+
Sbjct: 565 FMKPTLIDELTFTRVVDITSGDGHCMALTHNNEVYCWGNNAMGQCGLGHTNSP-ISVPTQ 623
Query: 171 VECLSGIFTKQAALGFEQSVAVTG---GGKVLSWGAGGSGRLGHGQESSILGFLRS 223
V+ L+ + Q + G S+A T V+SW L + FL S
Sbjct: 624 VQQLNNVTIHQISAGTSHSIAYTAMPSDRHVISWSRPYCVDLSESTFKKMNNFLSS 679
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 155/366 (42%), Gaps = 80/366 (21%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY- 132
+ L G T ++ GCV + G +G+LG+ ++ S + + + +IS+
Sbjct: 318 QMLEAGQYCTFAVSGDGCVRSCGKGSYGRLGLGDSNNQSTLKTIVFDPPQTIRKISSSKG 377
Query: 133 --HHSSAITVDGELYMWGKNSNGQLG----LGKKAAKVI--PIPTK-VECLSGIFTKQAA 183
H+ A+T +G ++ WG G+LG L K+ K+I P+ + V C+S
Sbjct: 378 SDGHTLALTTEGCIFSWGDGDYGKLGHGSSLTHKSPKIIEGPLARRIVVCVSA------- 430
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G+ S VT G++ +WG G GRLG G +TS P L+K+ IA
Sbjct: 431 -GYRHSACVTQEGQLFTWGEGDYGRLGLGD---------NTSRNVPVLVKD-------IA 473
Query: 244 AAGFL-----HSACIDENG-RVYIFGDRAVDKMLFQEGNHARRPSLI------------- 284
+AG + H+ + ++G V+ FG K+ + + RP +I
Sbjct: 474 SAGSVVCGSSHTLVLAQDGLTVWSFGAGDNGKLGHGDTSRVYRPKVIESINGMMFYKLCA 533
Query: 285 ---------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
G++++WG CLG GS D + + + V ++ G H A
Sbjct: 534 GSQYSLALNDSGQVFSWGC--GACLGCGSPDATFMKPTLIDELTFTRVVDITSGDGHCMA 591
Query: 336 IS-EGKILTWGWGGSHGTFSEDGHSSGGQ--LGHGNDVDYIHPTIVNFGENVKALQVSCG 392
++ ++ W G+++ GQ LGH N + PT V NV Q+S G
Sbjct: 592 LTHNNEVYCW------------GNNAMGQCGLGHTNSPISV-PTQVQQLNNVTIHQISAG 638
Query: 393 FNHTGA 398
+H+ A
Sbjct: 639 TSHSIA 644
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 122/287 (42%), Gaps = 62/287 (21%)
Query: 121 LKKEVVQISTGYHHSSAITV-------DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
L ++VV +S Y S T + ++Y WG NS+ QL + + I P KV+
Sbjct: 256 LMEQVVSLSEEYAISCTETATKSVDMNNCDVYAWGSNSSHQLA--ELGSDKIVFPKKVKS 313
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
++ G + AV+G G V S G G GRLG G +S+ L++ P+ I+
Sbjct: 314 FGN--SQMLEAGQYCTFAVSGDGCVRSCGKGSYGRLGLG-DSNNQSTLKTIVFDPPQTIR 370
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWG 293
++ K G+ +L + G +++WG
Sbjct: 371 KISSSK-----------------------------------GSDGHTLALTTEGCIFSWG 395
Query: 294 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGT 352
+ G LG GS SP+ ++GP + V VS G++H+A ++ EG++ TWG G
Sbjct: 396 DGDYGKLGHGSSLTHKSPKIIEGPLARRIVVCVSAGYRHSACVTQEGQLFTWGEGDY--- 452
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G+LG G++ P +V + A V CG +HT L
Sbjct: 453 ---------GRLGLGDNTSRNVPVLVK--DIASAGSVVCGSSHTLVL 488
>gi|334329483|ref|XP_003341232.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Monodelphis domestica]
Length = 1170
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 126/272 (46%), Gaps = 57/272 (20%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL TE G VYA G N G
Sbjct: 58 MFGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKIAACGRNHTLVYTEEGKVYAAGGNSEG 117
Query: 102 QLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG+ E + L + + ++ Q+S G + S+A+T DG L+MWG NS GQ+GL
Sbjct: 118 QLGLGDTEERTTFQL--VSFFTAQHKIKQLSAGSNTSAALTEDGVLFMWGDNSEGQIGLA 175
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG-------- 210
++A +P E G + G+ S VT G++ ++G +G+LG
Sbjct: 176 EEANVCVP----SEVTIGKPISWISCGYYHSAFVTTEGELYTFGEPENGKLGLSPEQLKN 231
Query: 211 HGQESSILG--------------------------------------FLRSTSEYTPRLI 232
H +LG F+ TSE P+++
Sbjct: 232 HRIPQLVLGIPGKVNQVACGGGHTVALTEEEVYTFGLGQFGQLGLGTFIFETSE--PKVV 289
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
K L+ K++ A G H+A I + G +Y FGD
Sbjct: 290 KHLQNQKIQYIACGENHTALISDTGHMYTFGD 321
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 150/334 (44%), Gaps = 73/334 (21%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG HT +T +Y G N++GQLG+ + +P + LK E V+I+ G +H
Sbjct: 40 LSCGDEHTALITGNSKLYMFGSNNWGQLGLGSKTTVN-KPTCVKALKPEKVKIAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ T +G++Y G NS GQLGLG + T + +S FT KQ + G S
Sbjct: 99 TLVYTEEGKVYAAGGNSEGQLGLGDTEER-----TTFQLVS-FFTAQHKIKQLSAGSNTS 152
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T G + WG G++G +E+++ SE T G + + G+ H
Sbjct: 153 AALTEDGVLFMWGDNSEGQIGLAEEANVC----VPSEVTI-------GKPISWISCGYYH 201
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
SA + + GELYT+G ENG LG+ + +
Sbjct: 202 SAFV------------------------------TTEGELYTFGEPENGKLGLSPEQLKN 231
Query: 310 S--PERVQG-PFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGH 366
P+ V G P V+QV+CG HT A++E ++ T+G G GQLG
Sbjct: 232 HRIPQLVLGIP---GKVNQVACGGGHTVALTEEEVYTFGLG------------QFGQLGL 276
Query: 367 GNDV-DYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G + + P +V +N K ++CG NHT +
Sbjct: 277 GTFIFETSEPKVVKHLQNQKIQYIACGENHTALI 310
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 105/246 (42%), Gaps = 53/246 (21%)
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
+ G E + +TG K+ +G+ G+LG G ++++ P +K L+ KVKI
Sbjct: 41 SCGDEHTALITGNSKLYMFGSNNWGQLGLGSKTTV---------NKPTCVKALKPEKVKI 91
Query: 243 AAAGFLHSACIDENGRVYIFG-------------DRAVDKML-FQEGNHARRP------- 281
AA G H+ E G+VY G +R +++ F H +
Sbjct: 92 AACGRNHTLVYTEEGKVYAAGGNSEGQLGLGDTEERTTFQLVSFFTAQHKIKQLSAGSNT 151
Query: 282 --SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ-GPFSESPVDQVSCGWKHTAAIS- 337
+L G L+ WG N G +G+ + P V G P+ +SCG+ H+A ++
Sbjct: 152 SAALTEDGVLFMWGDNSEGQIGLAEEANVCVPSEVTIG----KPISWISCGYYHSAFVTT 207
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNH 395
EG++ T+G G+LG + H P +V G K QV+CG H
Sbjct: 208 EGELYTFG------------EPENGKLGLSPEQLKNHRIPQLV-LGIPGKVNQVACGGGH 254
Query: 396 TGALLE 401
T AL E
Sbjct: 255 TVALTE 260
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+G G +G+LGLG+ + P V + ++ +ACG HT +++TG +Y G G
Sbjct: 266 FGLGQFGQLGLGTFIFETSEPKVVKHLQNQKIQYIACGENHTALISDTGHMYTFGDGRHG 325
Query: 102 QLGI-SENIGYSLEPLRISGLKKEVVQI 128
+LG+ EN P S K +V++
Sbjct: 326 KLGLGQENFTNQFVPTLCSNFLKFIVRL 353
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F K ++ +ACGG H L
Sbjct: 319 FGDGRHGKLGLGQENFTNQFVPTLCSNFLKFIVRLVACGGCHMLVF 364
>gi|57242759|ref|NP_060661.3| RCC1 and BTB domain-containing protein 1 [Homo sapiens]
gi|114649667|ref|XP_001155108.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 3 [Pan
troglodytes]
gi|397476979|ref|XP_003809865.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pan paniscus]
gi|74751227|sp|Q8NDN9.1|RCBT1_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
Full=Chronic lymphocytic leukemia deletion region gene 7
protein; Short=CLL deletion region gene 7 protein;
AltName: Full=Regulator of chromosome condensation and
BTB domain-containing protein 1
gi|21739270|emb|CAD38683.1| hypothetical protein [Homo sapiens]
gi|117646918|emb|CAL37574.1| hypothetical protein [synthetic construct]
gi|208965426|dbj|BAG72727.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [synthetic construct]
gi|410208766|gb|JAA01602.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410264076|gb|JAA20004.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410293802|gb|JAA25501.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410338539|gb|JAA38216.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
Length = 531
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 139/300 (46%), Gaps = 47/300 (15%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P P
Sbjct: 114 QGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
TP V++AA LHS C+++ + G +A +L G
Sbjct: 223 TP----------VRVAA---LHSVCVNQ----IVCG-------------YAHTLALTDEG 252
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 345
LY WG+N G LG G+ + L SP + E V+ +C HT+A G + WG
Sbjct: 253 LLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 137/312 (43%), Gaps = 51/312 (16%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 GLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V A G HS + +G V+ +G ++ G+ A +P+
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV S V+Q+
Sbjct: 180 IKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG ++ GQLG GN + + P + +
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHIMVEKERVV 287
Query: 387 LQVSCGFNHTGA 398
+C HT A
Sbjct: 288 EIAACHSAHTSA 299
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
Length = 1187
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 137/307 (44%), Gaps = 48/307 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ S RP V + + +A GGAH+ +T TG ++ G +G+
Sbjct: 413 WGEAEDGKLGHGNRNSCDRPRVIESLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGR 472
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ ++P + LK V+ ++ +G + IT D ++ WG G+LG G
Sbjct: 473 LGHGDSED-QMKPKLVEALKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRG- 530
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ IP KVE L G + G + SVA+T G V +WG G RLGHG + +
Sbjct: 531 -GSDGCKIPQKVEALIGQGVVKVECGSQFSVALTKSGCVYTWGKGDYHRLGHGSDDHV-- 587
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHA 278
PR + L+G V A G LH AC D+
Sbjct: 588 -------RRPRKVAALQGKNVISIATGSLHCVACTDQ----------------------- 617
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
GE++TWG N+ G LG GS + P R+ +++V+CG H+ A S
Sbjct: 618 --------GEVFTWGDNDEGQLGDGSTSAIPRP-RLVAALQGKKINRVACGSAHSLAWST 668
Query: 339 GKILTWG 345
K + G
Sbjct: 669 SKPVNAG 675
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 168/385 (43%), Gaps = 61/385 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLFLTETGCVYATGLNDFG 101
WG+ G+LG P C A +L+ + GG TLF VYATG G
Sbjct: 313 WGHNHRGQLGGVEGAKVKLPTPCDALA--ALRPVQLIGGEQTLF-----AVYATGYGAGG 365
Query: 102 QLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S LE ++ +KK V +++G H A++ +GE++ WG+ +G+LG
Sbjct: 366 RLGIGGTESVSSPTLLESIQHVHIKK--VAVNSGGKHCLALSSEGEVFSWGEAEDGKLGH 423
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P +E L G A G S +T G++ +WG G GRLGHG
Sbjct: 424 GNRNS--CDRPRVIESLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGD---- 477
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGD----------- 264
S + P+L++ L+GV+V A +G + CI ++ V+ +GD
Sbjct: 478 -----SEDQMKPKLVEALKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGS 532
Query: 265 ------RAVDKMLFQ-----EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ V+ ++ Q E +L G +YTWG + LG GS D + P +
Sbjct: 533 DGCKIPQKVEALIGQGVVKVECGSQFSVALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRK 592
Query: 314 VQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
V ++ + + A +G++ TW G + GQLG G+
Sbjct: 593 VAALQGKNVISIATGSLHCVACTDQGEVFTW------------GDNDEGQLGDGSTSAIP 640
Query: 374 HPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG H+ A
Sbjct: 641 RPRLVAALQGKKINRVACGSAHSLA 665
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 105/252 (41%), Gaps = 59/252 (23%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G+++ WG N GQLG G + AKV +PT + L+ + Q G + AV G
Sbjct: 308 GQIWGWGHNHRGQLG-GVEGAKV-KLPTPCDALAALRPVQLIGGEQTLFAVYATGY---- 361
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
LG + S +P L++ ++ V +K A C+
Sbjct: 362 -----------GAGGRLGIGGTESVSSPTLLESIQHVHIKKVAVNSGGKHCL-------- 402
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+++WG E+G LG G+ + P ++ +
Sbjct: 403 --------------------ALSSEGEVFSWGEAEDGKLGHGNRNSCDRPRVIESLRGKE 442
Query: 322 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD ++ G H+A I S G++ TWG G G+LGHG+ D + P +V
Sbjct: 443 VVD-IAAGGAHSACITSTGELFTWGKG------------RYGRLGHGDSEDQMKPKLVEA 489
Query: 381 GENVKALQVSCG 392
+ V+ + V+CG
Sbjct: 490 LKGVRVIDVACG 501
>gi|142942429|gb|ABO93003.1| putative regulator of chromosome condensation RCC1 [Solanum
tuberosum]
Length = 951
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 162/366 (44%), Gaps = 63/366 (17%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
++ ++CG H + +T+ G ++ G G+LG S P I K V+ I+ G
Sbjct: 310 VQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVS-HPKLIKNFKGMNVELIACG 368
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC--LSGIFTKQAALGFEQS 189
+HS A+T G+LY WG + LG ++ IP KV C + G+ + G +
Sbjct: 369 EYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKV-CGLMEGLRVSHVSCGPWHT 427
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+T G++ ++G G G LGHG S + TPR ++ G+K A G H
Sbjct: 428 ALITSAGRLFTFGDGTFGALGHGDRSGCI---------TPREVETFNGLKTLKVACGVWH 478
Query: 250 SACIDE-------------NGRVYIFGD---------------------RAVDKMLFQEG 275
+A + E +G ++ +GD VDK +
Sbjct: 479 TAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITALVDKSFSEVA 538
Query: 276 -NHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
++A +L + G +YT GSN G LG + + SP V+ +S V+++SCG H A
Sbjct: 539 CSYAMTVALTTTGRVYTMGSNVYGQLGCPLANGM-SPICVEDYLVDSTVEEISCGSHHVA 597
Query: 335 AI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 393
+ S ++ TWG G GQLGHG+ + PT+V+ + + ++ CG
Sbjct: 598 VLTSRTEVYTWGKG------------ENGQLGHGDCENKCTPTLVDILRDKQVKRIVCGS 645
Query: 394 NHTGAL 399
N + A+
Sbjct: 646 NFSAAI 651
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 73/150 (48%), Gaps = 2/150 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD G+LG G + R P +A S +AC A T+ LT TG VY G N +GQ
Sbjct: 504 WGDGDKGKLGHGDNKPRLAPQCITALVDKSFSEVACSYAMTVALTTTGRVYTMGSNVYGQ 563
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG G S + + V +IS G HH + +T E+Y WGK NGQLG G
Sbjct: 564 LGCPLANGMSPICVEDYLVDSTVEEISCGSHHVAVLTSRTEVYTWGKGENGQLGHGDCEN 623
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
K PT V+ L K+ G S A+
Sbjct: 624 KC--TPTLVDILRDKQVKRIVCGSNFSAAI 651
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 103/239 (43%), Gaps = 54/239 (22%)
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P +E + + + G ++ VT G+ SWG GRLGHG E+ +
Sbjct: 299 PKSLESSVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDV---------S 349
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
P+LIK +G+ V++ A G HS + S G
Sbjct: 350 HPKLIKNFKGMNVELIACGEYHSCAV------------------------------TSSG 379
Query: 288 ELYTW--GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTW 344
+LYTW G+ +G LG S P++V G V VSCG HTA I S G++ T+
Sbjct: 380 DLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGPWHTALITSAGRLFTF 439
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
G GTF G LGHG+ I P V +K L+V+CG HT A++E +
Sbjct: 440 G----DGTF--------GALGHGDRSGCITPREVETFNGLKTLKVACGVWHTAAVVELM 486
>gi|395521017|ref|XP_003764618.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sarcophilus
harrisii]
Length = 531
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 132/301 (43%), Gaps = 49/301 (16%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTIVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+V++++ G HHS A+ DGE+Y WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADGEVYAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
TP + L V V G+ H+ +L
Sbjct: 223 -TPCRVAALHSVCVLQIVCGYAHTL------------------------------ALTDE 251
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTW 344
G LY WG+N G LG G+ L SP ++ E V+ +C HT+A G + W
Sbjct: 252 GLLYAWGANTYGQLGTGNKSNLLSPAQIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMW 310
Query: 345 G 345
G
Sbjct: 311 G 311
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G VYA G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADGEVYAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +V L + Q G+ ++A+T G + +WGA G+LG G +S++L
Sbjct: 218 NGNQLTP--CRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAQIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 124/291 (42%), Gaps = 55/291 (18%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSANEAIYVTHSDEVFVFGLNCSNCLGTGDNQSTI--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYT 291
IK++ V A G HS +L + GE+Y
Sbjct: 127 IKQVIEV-----ACGSHHSM------------------------------ALAADGEVYA 151
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 350
WG N G +G GS +P +V V ++CG + A+ G++ WG+ G+
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGN- 210
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GQLG GN+ + + P V +V LQ+ CG+ HT AL +
Sbjct: 211 -----------GQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTD 250
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P +I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKSNLLSPAQIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
>gi|312622781|ref|YP_004024394.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203248|gb|ADQ46575.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kronotskyensis 2002]
Length = 743
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 171/379 (45%), Gaps = 56/379 (14%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ +YG+ PV E ++ A+A G +L + G V+A G+N+ G
Sbjct: 115 IWGHTNYGQRKSDVYRDFTTPVKVK--ELKNIVAIAAGWDFSLAVGSDGSVWAWGINNHG 172
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LGI ++ S P+++ GLK +VV +S G +HS A+ DG ++ WG N +G+LG
Sbjct: 173 ELGIG-SLKPSAVPVKVKGLK-DVVAVSAGLYHSLALKRDGTVWSWGYNEDGELGNRPTE 230
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P +V+ LS + A GF S+A+ G V WG G + G S
Sbjct: 231 DYTVSVPVRVKGLSDVIAISAG-GF-HSIALNKDGAVWIWGGGIIEKNGKIDNS------ 282
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
Y P I+ L KV AAG+ HS + ++G V+++G + + G H+ P
Sbjct: 283 -----YIPVRIRWLN--KVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSFLP 335
Query: 282 --------------------SLISGGELYTWGSNENGCLGIGSIDV-LHSPERVQGPFSE 320
+L G ++ WG+N G LG + L+ P +V+
Sbjct: 336 VQVKGLKNVVAVAAGRLHSVALTKNGTIWAWGNNAFGQLGRENNSFSLNLPYKVKWL--- 392
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
V ++ G HT AI + W WG ++ GQLG+G PT V
Sbjct: 393 DNVVAIAAGGSHTLAIKRDGTV-WSWGANN----------KGQLGNGTYKSSYIPTCVK- 440
Query: 381 GENVKALQVSCGFNHTGAL 399
G N KA+ V G H+ A+
Sbjct: 441 GLN-KAVLVEAGSQHSLAV 458
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 179/379 (47%), Gaps = 58/379 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ + PV + + A++ G H+L L + G V+ G ++GQ
Sbjct: 66 WGYNGFGQLGNGTYKDSCIPVRVKGLK--DVVAVSAGTFHSLALKKDGSVWIWGHTNYGQ 123
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
++ P+++ L K +V I+ G+ S A+ DG ++ WG N++G+LG+G +
Sbjct: 124 RKSDVYRDFT-TPVKVKEL-KNIVAIAAGWDFSLAVGSDGSVWAWGINNHGELGIG--SL 179
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K +P KV+ L + A G S+A+ G V SWG G LG+ R
Sbjct: 180 KPSAVPVKVKGLKDVVAVSA--GLYHSLALKRDGTVWSWGYNEDGELGN----------R 227
Query: 223 STSEYT---PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD--------------- 264
T +YT P +K L V + I+A GF HS ++++G V+I+G
Sbjct: 228 PTEDYTVSVPVRVKGLSDV-IAISAGGF-HSIALNKDGAVWIWGGGIIEKNGKIDNSYIP 285
Query: 265 ---RAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
R ++K++ + +L G ++ WG N G LG + P +V+G
Sbjct: 286 VRIRWLNKVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSFLPVQVKGL---K 342
Query: 322 PVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNF 380
V V+ G H+ A+++ + W W G+++ GQLG N+ ++ P V +
Sbjct: 343 NVVAVAAGRLHSVALTKNGTI-WAW----------GNNAFGQLGRENNSFSLNLPYKVKW 391
Query: 381 GENVKALQVSCGFNHTGAL 399
+NV A ++ G +HT A+
Sbjct: 392 LDNVVA--IAAGGSHTLAI 408
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 181/425 (42%), Gaps = 97/425 (22%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ YG LG E + PV + ++ A+A G H++ LT+ G ++A G N FG
Sbjct: 315 VWGHNSYGVLGSNVGEHSFLPVQVKGLK--NVVAVAAGRLHSVALTKNGTIWAWGNNAFG 372
Query: 102 QLGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG EN +SL P ++ L VV I+ G H+ AI DG ++ WG N+ GQLG G
Sbjct: 373 QLG-RENNSFSLNLPYKVKWLD-NVVAIAAGGSHTLAIKRDGTVWSWGANNKGQLGNGTY 430
Query: 161 AAKVIPIPTKVECLSGIFTKQAAL---GFEQSVAVTGGGKVLSWG--------------- 202
+ IP C+ G+ +A L G + S+AV G V WG
Sbjct: 431 KSSYIP-----TCVKGL--NKAVLVEAGSQHSLAVDKDGTVWVWGFIESVWSEKNTKDIL 483
Query: 203 ----------------AGGSGRL----------GHGQESSILGFLRSTSEYTPRLIKELE 236
AGG + G G + F S+ +LI+ L+
Sbjct: 484 SPLPIKIGKLNDITEIAGGLDYILVLRKDGNIWGCGNDFYFRKFTDSSVSSVTKLIR-LD 542
Query: 237 GVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG--------- 286
+K V+ AAG+ HS + +G V+ +GD +D + N + +P I G
Sbjct: 543 NIKNVRSIAAGYFHSLAVRTDGTVWSWGDTNLDNKE-KYLNFSEKPVKIKGLSGVVKVAA 601
Query: 287 -----------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
G +++WG N G LG G+ + P RV+G + V ++ G H+ A
Sbjct: 602 GKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPVRVKGL---NNVVAIAAGDYHSMA 658
Query: 336 I-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
+ +G + W G + GQLG N P V +NV A ++ G
Sbjct: 659 LKKDGTVWVW------------GSNIRGQLGRRNIEFSTVPLKVEKLDNVVA--IAAGDT 704
Query: 395 HTGAL 399
H+ AL
Sbjct: 705 HSVAL 709
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 25/206 (12%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
+++++A G H+L + G V++ G D + + +S +P++I GL VV+++ G
Sbjct: 546 NVRSIAAGYFHSLAVRTDGTVWSWG--DTNLDNKEKYLNFSEKPVKIKGLSG-VVKVAAG 602
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
+HS A+ DG ++ WG N+ GQLG G + +P+ +V+ L+ + A G S+A
Sbjct: 603 KYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPV--RVKGLNNVVA--IAAGDYHSMA 658
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT--PRLIKELEGVKVKIAAAGFLH 249
+ G V WG+ G+LG R E++ P +++L+ V V I AAG H
Sbjct: 659 LKKDGTVWVWGSNIRGQLG-----------RRNIEFSTVPLKVEKLDNV-VAI-AAGDTH 705
Query: 250 SACIDENGRVYIFG---DRAVDKMLF 272
S + ++G V+++G DR + K +
Sbjct: 706 SVALKKDGTVWVWGIECDRDLSKEIL 731
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G+ E+ + PV +++ A+A G H++ L + G V+ G N GQ
Sbjct: 618 WGYNAYGQLGNGTRETSFVPVRVKGL--NNVVAIAAGDYHSMALKKDGTVWVWGSNIRGQ 675
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG NI +S PL++ L VV I+ G HS A+ DG +++WG + L ++
Sbjct: 676 LG-RRNIEFSTVPLKVEKLD-NVVAIAAGDTHSVALKKDGTVWVWGIECDRDLSKEILSS 733
Query: 163 KVIPIPTK 170
IP+ K
Sbjct: 734 SSIPVQIK 741
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 114/277 (41%), Gaps = 61/277 (22%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V+ G H+ AI DG ++ WG N GQLG G IP+ +V+ L + A
Sbjct: 43 KVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCIPV--RVKGLKDVVAVSA- 99
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G S+A+ G V W G +GQ S R + TP +KEL+ + V I
Sbjct: 100 -GTFHSLALKKDGSVWIW-----GHTNYGQRKS--DVYRDFT--TPVKVKELKNI-VAI- 147
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
AAG+ S + +G V + WG N +G LGIG
Sbjct: 148 AAGWDFSLAVGSDGSV------------------------------WAWGINNHGELGIG 177
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 362
S+ P +V+G V VS G H+ A+ +G + +WG ++ED G
Sbjct: 178 SLKPSAVPVKVKGL---KDVVAVSAGLYHSLALKRDGTVWSWG-------YNED-----G 222
Query: 363 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+LG+ DY V + +S G H+ AL
Sbjct: 223 ELGNRPTEDYTVSVPVRVKGLSDVIAISAGGFHSIAL 259
>gi|74200231|dbj|BAE22920.1| unnamed protein product [Mus musculus]
Length = 681
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 171/388 (44%), Gaps = 57/388 (14%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G + G+
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 239
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E +L RS P+ + + +++A G
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGG-- 290
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVL 308
G + ++ V Y +G + G LG+G+
Sbjct: 291 --------GHTVVLTEKVV----------------------YAFGLGQFGQLGLGTFLFE 320
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
S ++ + + +SCG HTA ++E G + T+G G HG LG
Sbjct: 321 TSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG-DGRHGKLG---------LGME 370
Query: 368 NDVDYIHPTIVNFGENVKALQVSCGFNH 395
N + PT+ + ++CG H
Sbjct: 371 NFTNQFFPTLCSNFLRFAVQLIACGGCH 398
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 157/340 (46%), Gaps = 57/340 (16%)
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
+ +TG V+ FG+ +ENI P + + +S G H++ +T + +L
Sbjct: 45 LVPDTGAVFT-----FGKTKFAENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKL 94
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
YM+G N+ GQLGLG KAA I PT ++ L K AA G ++ T G V + G
Sbjct: 95 YMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGN 152
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LG G F + +TP +K +AG SA + E+G+++++GD
Sbjct: 153 NEGQLGLGDTDDRDTFHQIVF-FTP-------ADTIKQLSAGANTSAALTEDGKLFMWGD 204
Query: 265 RAVDKMLFQEGNHARRPSLIS--------------------GGELYTWGSNENGCLGIGS 304
+ ++ ++ ++ P ++ GELYT+G ENG LG+ +
Sbjct: 205 NSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPN 264
Query: 305 IDVLH--SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
+++ SP+RV G V QV+CG HT ++E + +G G G
Sbjct: 265 ELLMNHRSPQRVLG--IPERVIQVACGGGHTVVLTEKVVYAFGLG------------QFG 310
Query: 363 QLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QLG G + + P I+ ++ K +SCG NHT + E
Sbjct: 311 QLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 350
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 51/245 (20%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E + VTG K+ +G+ G+LG G +++I+ P IK L+ KVK+AA
Sbjct: 81 GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAA 131
Query: 245 AGFLHSACIDENGRVYIFG-------------DRAV--DKMLFQEGNHARRPS------- 282
G H+ + G VY G DR + F + ++ S
Sbjct: 132 CGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSA 191
Query: 283 -LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 340
L G+L+ WG N G +G+ + P V P+ +SCG+ H+A ++ +G+
Sbjct: 192 ALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT---VGKPISWISCGYYHSAFVTMDGE 248
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHTGA 398
+ T+G G+LG N++ H P V G + +QV+CG HT
Sbjct: 249 LYTFG------------EPENGKLGLPNELLMNHRSPQRV-LGIPERVIQVACGGGHTVV 295
Query: 399 LLEYV 403
L E V
Sbjct: 296 LTEKV 300
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 402
>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
Length = 524
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 137/326 (42%), Gaps = 51/326 (15%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
++ G H+L + G +YA G N GQLG + + S+ L + Q+S G HS
Sbjct: 54 VSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGVTFTQVSAGADHS 113
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL-SGIFTKQAALGFEQSVAVTG 194
A+ DG Y WG+N++G+LG G +P+ + SG+ Q G S+AV
Sbjct: 114 LAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGGFHSLAVGS 173
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G + SWG SG+LG G + L+ ++ P GV +AG HS I
Sbjct: 174 NGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVP------AGVTFSQVSAGDRHSLAIG 227
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
NG+ Y WG G LGIGSI +P V
Sbjct: 228 SNGKT------------------------------YAWGEARGGQLGIGSISRTPAPALV 257
Query: 315 QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
P S QVS G H+ A+ S+GK W G++ GQLG+ +
Sbjct: 258 SAPAGVS-FTQVSAGDLHSLAVGSDGKAYAW------------GNNDSGQLGNATTTSSL 304
Query: 374 HPTIVNFGENVKALQVSCGFNHTGAL 399
P +V+ + QVS G +H+ A+
Sbjct: 305 APVLVSPMGGLAVTQVSAGADHSLAI 330
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 153/364 (42%), Gaps = 49/364 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG S+ + PV+ S + + ++ G H+L + G YA G N G+
Sbjct: 73 WGYNSSGQLGNNSILNSSVPVLVSTPDGVTFTQVSAGADHSLAVGSDGNAYAWGRNTDGR 132
Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS---TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG + G S+ L +G V IS G HS A+ +G++Y WG N +GQLG G
Sbjct: 133 LGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGGFHSLAVGSNGDIYSWGYNRSGQLGDGT 192
Query: 160 KAAKVIPIPTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A +P+ + +G+ Q + G S+A+ GK +WG G+LG G S
Sbjct: 193 TLASSVPLKVSAGAVPAGVTFSQVSAGDRHSLAIGSNGKTYAWGEARGGQLGIGSIS--- 249
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
R+ + P L+ GV +AG LHS + +G+ Y +G+ ++ +
Sbjct: 250 ---RTPA---PALVSAPAGVSFTQVSAGDLHSLAVGSDGKAYAWGNNDSGQLGNATTTSS 303
Query: 279 RRPSLIS----------------------GGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
P L+S G Y WG N NG LG +I P V
Sbjct: 304 LAPVLVSPMGGLAVTQVSAGADHSLAIGADGNAYAWGLNVNGQLGNNTITTSTVPVMVTA 363
Query: 317 PFSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
P + ++ G H+ A S+ TW G +S GQLG+G + P
Sbjct: 364 PDGVT-FTRIEAGGLHSLTAASDENTYTW------------GANSFGQLGNGTSDGSLVP 410
Query: 376 TIVN 379
++
Sbjct: 411 VAIS 414
>gi|418738679|ref|ZP_13295072.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
gi|410745377|gb|EKQ98287.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
Length = 506
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 144/322 (44%), Gaps = 61/322 (18%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WGN G+LG+G+ + R P + + A G H L L G V
Sbjct: 202 WGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMGAY--GFNHALILKSDGTV 259
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG N +S++P+ + GL +V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGANDLNADSFSMDPVAVVGLS-DVIQVIAGSEHSAALTENGEVYVWG 318
Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G+ +A + P KVE LSGI KQ A G + +A+ G++ SWG S
Sbjct: 319 RNQYGNLGNGRLSAANAIQSTPVKVEGLSGI--KQIANGRDHILALASDGRIYSWGLNAS 376
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG G S TP + L +K A++ V+ G ++
Sbjct: 377 GQLGIGGNGS--------PNPTPNPTQIL---NIKNASS-------------VWAGGTQS 412
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGC-LGIGSIDVLHSPERVQGPFSESPVDQ 325
S++ GE+ WG+N N L IG + L E + V
Sbjct: 413 F--------------SILKNGEVKGWGANGNTANLAIGETNTLKVYEPNKAVVGIDNVIH 458
Query: 326 VSCGWKHT-AAISEGKILTWGW 346
CG H A + +G+I WGW
Sbjct: 459 FGCGATHNFALLGDGEIYGWGW 480
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 148/364 (40%), Gaps = 63/364 (17%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
L+ GGAH+ FL + G VY G N+FGQLG + G + + + I ++
Sbjct: 131 LSAGGAHSGFL-KNGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNN 189
Query: 135 SSAITVDGELYMWGKNSNGQLGLGK--------KAAKVIPIPTKVECLSGIFTKQAALGF 186
S AI +G +Y WG N+ GQLG+G +AA PT V ++ A GF
Sbjct: 190 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAV--MGAYGF 247
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAAA 245
++ + G V+++G G+LG+G L + S P + L V I A
Sbjct: 248 NHALILKSDGTVVAFGQNNVGQLGNGAND-----LNADSFSMDPVAVVGLSDVIQVI--A 300
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRP-------------------- 281
G HSA + ENG VY++G + L P
Sbjct: 301 GSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSGIKQIANGRDHIL 360
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW----KHTAAIS 337
+L S G +Y+WG N +G LGIG SP P + S W + + +
Sbjct: 361 ALASDGRIYSWGLNASGQLGIGGNG---SPNPTPNPTQILNIKNASSVWAGGTQSFSILK 417
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG-ENVKALQVSCGFNHT 396
G++ WG +G+++ +G N + P G +NV + CG H
Sbjct: 418 NGEVKGWG---------ANGNTANLAIGETNTLKVYEPNKAVVGIDNV--IHFGCGATHN 466
Query: 397 GALL 400
ALL
Sbjct: 467 FALL 470
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 74/177 (41%), Gaps = 11/177 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G L + + PV +K +A G H L L G +Y+ GL
Sbjct: 316 VWGRNQYGNLGNGRLSAANAIQSTPVKVEGLS--GIKQIANGRDHILALASDGRIYSWGL 373
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N + P L K + G S +I +GE+ WG N N L
Sbjct: 374 NASGQLGIGGNGSPNPTPNPTQILNIKNASSVWAGGTQSFSILKNGEVKGWGANGNTANL 433
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+G+ + P K + GI G + A+ G G++ WG G LG
Sbjct: 434 AIGETNTLKVYEPNK--AVVGIDNVIHFGCGATHNFALLGDGEIYGWGWNFKGSLGR 488
>gi|449522147|ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Cucumis sativus]
Length = 302
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 110/221 (49%), Gaps = 17/221 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG R P S+ + + +ACG HT+ ++ G +Y G + +GQ
Sbjct: 53 WGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQ 112
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + L P R+ L+ + QIS G+ H+ A+T DG+LY WG N GQ+G G
Sbjct: 113 LGHGD-FEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNI 171
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
PI K + Q + G+ ++AVT V SWG G +G+LGHG+
Sbjct: 172 DHCSPIQIKFPQDQKVI--QISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGE-------- 221
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACID-ENGRVYI 261
S TP + LE + V + + S+ ID +G+ ++
Sbjct: 222 -SVDRNTPMI---LEALSVDGCSGQQIESSNIDPSSGKTWV 258
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 119/255 (46%), Gaps = 47/255 (18%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG+N NGQLGLG ++P K++ GI K A G E + AVT G++ WG G
Sbjct: 1 WGRNQNGQLGLGTTEDSLVP--QKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRY 58
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--- 263
G LG G + L P+ + ++G K+ + A G+ H+ + G +Y +G
Sbjct: 59 GNLGLGDRNDRL---------VPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSK 109
Query: 264 ----------DRAV---------DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGS 304
DR V D + G +L + G+LY WG N+ G +G G
Sbjct: 110 YGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGD 169
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQ 363
SP +++ P + V Q+SCGW+HT A+++ + + +WG G + GQ
Sbjct: 170 NIDHCSPIQIKFP-QDQKVIQISCGWRHTLAVTDKQNVFSWGRG------------TNGQ 216
Query: 364 LGHGNDVDYIHPTIV 378
LGHG VD P I+
Sbjct: 217 LGHGESVDRNTPMIL 231
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 13/222 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ E P AFE S+K +A G HT +TE G ++ G +G
Sbjct: 1 WGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGN 60
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + L P ++S + ++V ++ G+ H+ +++ G LY +G + GQLG G
Sbjct: 61 LGLGDR-NDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFE 119
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P ++E L G Q + G+ ++A+T GK+ WG G++G G
Sbjct: 120 DRL--VPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGD-------- 169
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ +P IK + KV + G+ H+ + + V+ +G
Sbjct: 170 -NIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWG 210
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 110/224 (49%), Gaps = 45/224 (20%)
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG +G+LG G L P+ I+ EG+ +K+ AAG H+A + E+G ++
Sbjct: 1 WGRNQNGQLGLGTTEDSL---------VPQKIQAFEGISIKMVAAGAEHTAAVTEDGELF 51
Query: 261 IFG-------------DRAV---------DKMLFQEGNHARRPSLISGGELYTWGSNENG 298
+G DR V DKM+ S+ S G LYT+G ++ G
Sbjct: 52 GWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYG 111
Query: 299 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDG 357
LG G + P R++ ++ + Q+S GW+HT A++ +GK+ WGW
Sbjct: 112 QLGHGDFEDRLVPHRLEALRGDN-ISQISGGWRHTMALTTDGKLYGWGW----------- 159
Query: 358 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ GQ+G G+++D+ P + F ++ K +Q+SCG+ HT A+ +
Sbjct: 160 -NKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTD 202
>gi|449481449|ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 170/396 (42%), Gaps = 58/396 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LGLG+ E R A E ++ ++ G ++L +TE G ++ G N G
Sbjct: 10 WGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGWNQRGT 69
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
LG P ++ L ++VQ + G H A+ G Y WG N GQ G
Sbjct: 70 LGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPEK 129
Query: 157 ---LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
G+ + I IP + C + +Q A G SV +T G V +WG
Sbjct: 130 KDNTGRPPRRDIAIPQR--CAPKLIVRQVAAGGTHSVVLTREGHVWTWG----------- 176
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
+ G + S P ++ L+ V++ A G H+ + E+G ++ +G+ ++
Sbjct: 177 QPWPPGDITQIS--VPVRVQGLD--MVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTG 232
Query: 274 EGNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHS- 310
+ +P +L GE+Y WG E+G LG G D
Sbjct: 233 DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKM 292
Query: 311 -PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
P++VQ S + Q+SCG H+ A+ S+G++ ++G G HG G+ G
Sbjct: 293 VPQKVQ-LLSGEEIVQISCGGTHSVAVTSDGRMFSFG-RGDHGRL---GYGRKVTTGQPE 347
Query: 369 DVDYIHPTIVNFGENVK--ALQVSCGFNHTGALLEY 402
+V P EN A V+CG HT AL+++
Sbjct: 348 EVPIDIPPPRGRTENGHWIAKLVACGGRHTLALVQW 383
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 132/309 (42%), Gaps = 44/309 (14%)
Query: 40 AALWGNGDYGRLG--------LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
A WG +YG+ G G R + K ++ +A GG H++ LT G
Sbjct: 112 AYAWGGNEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGH 171
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ +GQ +I P+R+ GL V I+ G H+ A+ DG L+ WG N
Sbjct: 172 VWT-----WGQPWPPGDITQISVPVRVQGLDM-VRLIAVGAFHNLALQEDGTLWAWGNNE 225
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
GQLG G + PIP V+ LSG+ A G S A+T G+V WG G GRLG
Sbjct: 226 YGQLGTGDTQPRSQPIP--VQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGF 283
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G +S+ P+ ++ L G ++ + G HS + +GR++ FG
Sbjct: 284 GDNDK-------SSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFG-------- 328
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 331
G+H R + G T G E + I P R + V+CG +
Sbjct: 329 --RGDHGR----LGYGRKVTTGQPEEVPIDI-------PPPRGRTENGHWIAKLVACGGR 375
Query: 332 HTAAISEGK 340
HT A+ + K
Sbjct: 376 HTLALVQWK 384
>gi|449447492|ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 170/396 (42%), Gaps = 58/396 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LGLG+ E R A E ++ ++ G ++L +TE G ++ G N G
Sbjct: 10 WGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGWNQRGT 69
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
LG P ++ L ++VQ + G H A+ G Y WG N GQ G
Sbjct: 70 LGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPEK 129
Query: 157 ---LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
G+ + I IP + C + +Q A G SV +T G V +WG
Sbjct: 130 KDNTGRPPRRDIAIPQR--CAPKLIVRQVAAGGTHSVVLTREGHVWTWG----------- 176
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
+ G + S P ++ L+ V++ A G H+ + E+G ++ +G+ ++
Sbjct: 177 QPWPPGDITQIS--VPVRVQGLD--MVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTG 232
Query: 274 EGNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHS- 310
+ +P +L GE+Y WG E+G LG G D
Sbjct: 233 DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKM 292
Query: 311 -PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
P++VQ S + Q+SCG H+ A+ S+G++ ++G G HG G+ G
Sbjct: 293 VPQKVQ-LLSGEEIVQISCGGTHSVAVTSDGRMFSFG-RGDHGRL---GYGRKVTTGQPE 347
Query: 369 DVDYIHPTIVNFGENVK--ALQVSCGFNHTGALLEY 402
+V P EN A V+CG HT AL+++
Sbjct: 348 EVPIDIPPPRGRTENGHWIAKLVACGGRHTLALVQW 383
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 132/309 (42%), Gaps = 44/309 (14%)
Query: 40 AALWGNGDYGRLG--------LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
A WG +YG+ G G R + K ++ +A GG H++ LT G
Sbjct: 112 AYAWGGNEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGH 171
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ +GQ +I P+R+ GL V I+ G H+ A+ DG L+ WG N
Sbjct: 172 VWT-----WGQPWPPGDITQISVPVRVQGLDM-VRLIAVGAFHNLALQEDGTLWAWGNNE 225
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
GQLG G + PIP V+ LSG+ A G S A+T G+V WG G GRLG
Sbjct: 226 YGQLGTGDTQPRSQPIP--VQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGF 283
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G +S+ P+ ++ L G ++ + G HS + +GR++ FG
Sbjct: 284 GDNDK-------SSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFG-------- 328
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 331
G+H R + G T G E + I P R + V+CG +
Sbjct: 329 --RGDHGR----LGYGRKVTTGQPEEVPIDI-------PPPRGRTENGHWIAKLVACGGR 375
Query: 332 HTAAISEGK 340
HT A+ + K
Sbjct: 376 HTLALVQWK 384
>gi|6755348|ref|NP_035415.1| X-linked retinitis pigmentosa GTPase regulator isoform 3 [Mus
musculus]
gi|3258647|gb|AAC40190.1| retinitis pigmentosa GTPase regulator [Mus musculus]
Length = 746
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 171/388 (44%), Gaps = 57/388 (14%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G + G+
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 239
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E +L RS P+ + + +++A G
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGG-- 290
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVL 308
G + ++ V Y +G + G LG+G+
Sbjct: 291 --------GHTVVLTEKVV----------------------YAFGLGQFGQLGLGTFLFE 320
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
S ++ + + +SCG HTA ++E G + T+G G HG LG
Sbjct: 321 TSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG-DGRHGKLG---------LGME 370
Query: 368 NDVDYIHPTIVNFGENVKALQVSCGFNH 395
N + PT+ + ++CG H
Sbjct: 371 NFTNQFFPTLCSNFLRFAVQLIACGGCH 398
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 157/340 (46%), Gaps = 57/340 (16%)
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
+ +TG V+ FG+ +ENI P + + +S G H++ +T + +L
Sbjct: 45 LVPDTGAVFT-----FGKTKFAENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKL 94
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
YM+G N+ GQLGLG KAA I PT ++ L K AA G ++ T G V + G
Sbjct: 95 YMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGN 152
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LG G F + +TP +K +AG SA + E+G+++++GD
Sbjct: 153 NEGQLGLGDTDDRDTFHQIVF-FTP-------ADTIKQLSAGANTSAALTEDGKLFMWGD 204
Query: 265 RAVDKMLFQEGNHARRPSLIS--------------------GGELYTWGSNENGCLGIGS 304
+ ++ ++ ++ P ++ GELYT+G ENG LG+ +
Sbjct: 205 NSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPN 264
Query: 305 IDVLH--SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
+++ SP+RV G V QV+CG HT ++E + +G G G
Sbjct: 265 ELLMNHRSPQRVLG--IPERVIQVACGGGHTVVLTEKVVYAFGLG------------QFG 310
Query: 363 QLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QLG G + + P I+ ++ K +SCG NHT + E
Sbjct: 311 QLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 350
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 51/245 (20%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E + VTG K+ +G+ G+LG G +++I+ P IK L+ KVK+AA
Sbjct: 81 GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAA 131
Query: 245 AGFLHSACIDENGRVYIFG-------------DRAV--DKMLFQEGNHARRPS------- 282
G H+ + G VY G DR + F + ++ S
Sbjct: 132 CGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSA 191
Query: 283 -LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 340
L G+L+ WG N G +G+ + P V P+ +SCG+ H+A ++ +G+
Sbjct: 192 ALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT---VGKPISWISCGYYHSAFVTMDGE 248
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHTGA 398
+ T+G G+LG N++ H P V G + +QV+CG HT
Sbjct: 249 LYTFG------------EPENGKLGLPNELLMNHRSPQRV-LGIPERVIQVACGGGHTVV 295
Query: 399 LLEYV 403
L E V
Sbjct: 296 LTEKV 300
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 402
>gi|159037172|ref|YP_001536425.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157916007|gb|ABV97434.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 560
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 161/395 (40%), Gaps = 56/395 (14%)
Query: 33 STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
S + A WG+ G+LG GS PV S ++ +A G AH L +T G +
Sbjct: 51 SAVAADTALAWGDNASGQLGDGSTADSSMPVAVSLPAGVTVTTVAAGAAHNLAVTSAGTI 110
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKN 150
A G N GQLG P+ + GL V ++ G HS A+T G + WG N
Sbjct: 111 LAWGDNSSGQLG-DGTTSNRHTPVAV-GLPTGVTVTAVAAGAAHSLALTSAGTVLAWGAN 168
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+ GQLG G P P V G+ A G S+AVT G VL+WG SG+LG
Sbjct: 169 TIGQLGDGTTIDS--PAPVDVNLPPGVTATAVAAGAAHSLAVTSAGTVLAWGDNASGQLG 226
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G + TP ++ GV A G LHS + G V +G + ++
Sbjct: 227 EGT---------TIPSRTPVVVSLPSGVTATAVAGGDLHSLAVTSAGAVLAWGSNSSGQL 277
Query: 271 LFQEGNHARRPS------------------------LISGGELYTWGSNENGCLGIGSID 306
+G A R + L S G + WGSN +G LG G+
Sbjct: 278 --GDGTTADRSTPVAVSLSGGTTVTAVAAGIAFSLALSSAGAVLAWGSNSSGQLGDGTTA 335
Query: 307 VLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLG 365
+P V P + V ++ G H A+ S G + W G++S GQLG
Sbjct: 336 DRSTPVTVSSPAGTT-VTAIAGGDAHGLAVTSVGAAIAW------------GNNSFGQLG 382
Query: 366 HGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGAL 399
G + D + P V+ L ++ G H+ A+
Sbjct: 383 DGTNTDRVTPVAVSLPVGTTTLTAIAAGAAHSVAV 417
>gi|348528302|ref|XP_003451657.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Oreochromis
niloticus]
Length = 531
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 121/225 (53%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSA-FEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV+ SA + +ACG H++ LT+TG VYA G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALTDTGEVYAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P R+S K V I G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRRVSSCLQNKVAVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+V P ++ L G+ +Q G+ S+A+T G + +WGA G+LG G +S+ L
Sbjct: 218 NGNQV--TPCRLVGLQGLCVQQIVSGYAHSMALTDEGLLYAWGANTYGQLGTGNKSNQLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+ +++ E E + V+IAA H SA ++G+VY++G
Sbjct: 276 PV--------QILTEKERI-VEIAACHSTHTSAAKTQSGQVYMWG 311
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 121/271 (44%), Gaps = 48/271 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSA 137
G H L TE G ++A G N + QLG + + P+ +S L K+V +++ G HHS A
Sbjct: 84 GPHILLATEDGELFAWGHNGYSQLG-NGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMA 142
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGG 196
+T GE+Y WG N+ GQ+G G A + P P +V CL G S+AV G
Sbjct: 143 LTDTGEVYAWGYNNCGQVGSGSTANQ--PTPRRVSSCLQNKVAVSIVCGQTSSLAVVDNG 200
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+V WG G+G+LG G ++ TP + L+G+ V+ +G+ HS
Sbjct: 201 EVYGWGYNGNGQLGLGNNG---------NQVTPCRLVGLQGLCVQQIVSGYAHSM----- 246
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
+L G LY WG+N G LG G+ SP ++
Sbjct: 247 -------------------------ALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQILT 281
Query: 317 PFSESPVDQVSCGWKHTAA--ISEGKILTWG 345
E V+ +C HT+A G++ WG
Sbjct: 282 E-KERIVEIAACHSTHTSAAKTQSGQVYMWG 311
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 137/314 (43%), Gaps = 59/314 (18%)
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
P ++ ++K V + + + IT D E++++G N + LG G + + +P K++ L
Sbjct: 15 PQELASIRKACV-FGSSANEAIYITNDDEVFVFGLNCSNCLGTGDSLSTI--VPKKLDFL 71
Query: 175 SGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
SG K +L + + T G++ +WG G +LG+G + P L
Sbjct: 72 SG--RKVVSLSYGSGPHILLATEDGELFAWGHNGYSQLGNG---------TTNQGVAPVL 120
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS-------- 282
+ L KV A G HS + + G VY +G ++ G+ A +P+
Sbjct: 121 VSANLLNKKVTEVACGSHHSMALTDTGEVYAWGYNNCGQV--GSGSTANQPTPRRVSSCL 178
Query: 283 -----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 325
++ GE+Y WG N NG LG+G+ +P R+ G V Q
Sbjct: 179 QNKVAVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQVTPCRLVG-LQGLCVQQ 237
Query: 326 VSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 385
+ G+ H+ A+++ +L + WG ++ GQLG GN + + P + E +
Sbjct: 238 IVSGYAHSMALTDEGLL-YAWGA----------NTYGQLGTGNKSNQLSPVQI-LTEKER 285
Query: 386 ALQV-SCGFNHTGA 398
+++ +C HT A
Sbjct: 286 IVEIAACHSTHTSA 299
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P + ++ + G AH++ LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQVTPCRLVGLQGLCVQQIVSGYAHSMALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P++I K+ +V+I+ + H S+A T G++YMWG+ GQ
Sbjct: 265 LG-TGNKSNQLSPVQILTEKERIVEIAACHSTHTSAAKTQSGQVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 317 -SIVLPHLTHFACTDDVF 333
>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
Length = 396
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 148/365 (40%), Gaps = 65/365 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LGLG+ E + V A E +++++ G ++L + + G ++ G N G
Sbjct: 10 WGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGT 69
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
LG P + L ++VQ + G H A+ G Y WG N GQ G
Sbjct: 70 LGHPPETKTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAYAWGGNEYGQCGEEPSK 129
Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
G+ + I IP + C + +Q A G SV +T G V +WG +
Sbjct: 130 DETGRPVRRDIVIPKR--CAQQLTVRQVAAGGTHSVVLTREGYVWTWG-----------Q 176
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
G ++ S P ++ LE V++ A G H+ + E+
Sbjct: 177 PWPPGDIKQIS--VPVRVQGLE--NVRLIAVGAFHNLALKED------------------ 214
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
G L+ WG+NE G LG G P VQG + VD + GW TA
Sbjct: 215 ------------GTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTA 262
Query: 335 AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
+EG++ WG G HG G + + P VN +QVSCG
Sbjct: 263 LTNEGEVYGWG-RGEHGRLG---------FGDNDKSSKMLPQKVNLLPGEDIIQVSCGGT 312
Query: 395 HTGAL 399
H+ AL
Sbjct: 313 HSVAL 317
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 135/310 (43%), Gaps = 41/310 (13%)
Query: 40 AALWGNGDYGRLGL-GSLESRWRPVVCSAF------EKHSLKALACGGAHTLFLTETGCV 92
A WG +YG+ G S + RPV ++ +++ +A GG H++ LT G V
Sbjct: 112 AYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYV 171
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
+ +GQ +I P+R+ GL+ V I+ G H+ A+ DG L+ WG N
Sbjct: 172 WT-----WGQPWPPGDIKQISVPVRVQGLEN-VRLIAVGAFHNLALKEDGTLWAWGNNEY 225
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG G + PIP V+ L + A G S A+T G+V WG G GRLG G
Sbjct: 226 GQLGTGDTQPRSYPIP--VQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFG 283
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
+S+ P+ + L G + + G HS + +GR++ FG
Sbjct: 284 DNDK-------SSKMLPQKVNLLPGEDIIQVSCGGTHSVALTRDGRIFSFG--------- 327
Query: 273 QEGNHARRPSLISGGELYTWGSNENGCLGIGSID--VLHSPERVQGPFSESPVDQVSCGW 330
G+H R + G T G + I + H+ E G + V+CG
Sbjct: 328 -RGDHGR----LGYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWI---AKHVACGG 379
Query: 331 KHTAAISEGK 340
+HT AI E K
Sbjct: 380 RHTLAIVEWK 389
>gi|297694075|ref|XP_002824322.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pongo abelii]
gi|332241941|ref|XP_003270143.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Nomascus
leucogenys]
Length = 531
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 139/301 (46%), Gaps = 49/301 (16%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
TP V++AA LHS C+++ + G +A +L
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ----IVCG-------------YAHTLALTDE 251
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTW 344
G LY WG+N G LG G+ + L SP + E V+ +C HT+A G + W
Sbjct: 252 GLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMW 310
Query: 345 G 345
G
Sbjct: 311 G 311
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 137/312 (43%), Gaps = 51/312 (16%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 GLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V A G HS + +G V+ +G ++ G+ A +P+
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV S V+Q+
Sbjct: 180 IKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG ++ GQLG GN + + P + +
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHIMVEKERVV 287
Query: 387 LQVSCGFNHTGA 398
+C HT A
Sbjct: 288 EIAACHSAHTSA 299
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 4834
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 135/300 (45%), Gaps = 44/300 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ P + A + + +ACGGAH+ +T G +Y G +G+
Sbjct: 4079 WGEGDDGKLGHGNKNGCDHPQLIDALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRYGR 4138
Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG ++ L + + +V+ I+ +G + IT D ++ WG G+LG G
Sbjct: 4139 LGHGDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG-- 4196
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ IP K+E L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4197 GSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGSDEHV--- 4253
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P+ I L+G K+ A G LH + G V
Sbjct: 4254 ------RHPKKIAALQGKKIICIATGSLHCVACSDLGEV--------------------- 4286
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
+TWG N+ G LG G+++ +H P R+ +++V+CG H+ A S K
Sbjct: 4287 ---------FTWGDNDEGQLGDGTMNAIHRP-RLVVTLQGKNINRVACGSAHSLAWSTNK 4336
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 136/295 (46%), Gaps = 44/295 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG + S RP + A + ++ +ACG +H+ ++ TG ++ GL ++G+
Sbjct: 3096 WGEGEDGKLGHDNRLSLDRPKMIEALKSKRIRDIACGSSHSAAISSTGELFTWGLGEYGR 3155
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
LG +N+ L + L +VQ++ G + A++ +G ++ WG G+LG G
Sbjct: 3156 LGHGDNLTQLRPKLVKALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGKLGRG-- 3213
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ IP +E L+G+ G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3214 GSEGCDIPHNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRLGHGSDQHV--- 3270
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P L++ L K+ A G LH C + G+V
Sbjct: 3271 ------RKPTLVESLSEKKIVHVAVGALHCLCATDQGQV--------------------- 3303
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
Y WG N++G G G+I V P V V++V+CG H+ A
Sbjct: 3304 ---------YAWGDNDHGQQGNGTILVNRKPSLVLN-LEGVRVNRVACGSSHSIA 3348
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 155/365 (42%), Gaps = 63/365 (17%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P C + + +K + C L LT TG VY + Q P +I G
Sbjct: 468 PQSCDSIRELGVKQIVCAERWLLILTLTGKVYIMYYSSETQC-----------PEQIEGF 516
Query: 122 K-KEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
KE+ +++ HS A++ DG++Y WG G+LG G ++ PTK+ L G
Sbjct: 517 DGKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLGHGDNNSR--DQPTKITELVGKN 574
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG- 237
+ G S AVT G+V +WG G GRLGHG S P L+ L+
Sbjct: 575 VIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGT---------SEDHTVPTLVVGLKDY 625
Query: 238 VKVKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS----------- 285
V IA +G + + G V+ +GD K+ + ++ P LI
Sbjct: 626 FIVDIACGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDIEVARVY 685
Query: 286 -----------GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
G +YTWG +N LG GS + + P+ V+G + + +V+ G H
Sbjct: 686 CGSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEG-LNGKCIKKVAVGSGHVL 744
Query: 335 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 393
A+++ G++ +GWG + GQ+G ++ + PT++ + + + CG
Sbjct: 745 ALTDDGEV--YGWG----------RNDNGQVGETSETNVSEPTLLTLLQGKNIVDIDCGP 792
Query: 394 NHTGA 398
N + A
Sbjct: 793 NQSIA 797
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 176/392 (44%), Gaps = 67/392 (17%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA----CGGAHTLFLTE-TGCVYATG 96
+WG D +LG G S+ + V S SL AL GG+ +LF+ G +YA G
Sbjct: 2989 VWGLNDKDQLG-GLKGSKVKVPVYS----ESLTALKPIHIAGGSKSLFIVSYDGKLYACG 3043
Query: 97 LNDFGQLGI--SENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNS 151
G+LG+ S N+ P +++ L + V++ + +G H+ A+T+DG+++ WG+
Sbjct: 3044 EGTNGRLGLGHSNNVA---TPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGE 3100
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+G+LG + + + P +E L + A G S A++ G++ +WG G GRLGH
Sbjct: 3101 DGKLGHDNRLS--LDRPKMIEALKSKRIRDIACGSSHSAAISSTGELFTWGLGEYGRLGH 3158
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDK 269
G + ++ P+L+K L G + A G + + G V+ +GD K
Sbjct: 3159 GD---------NLTQLRPKLVKALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGK 3209
Query: 270 M----------------------LFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDV 307
+ E +L G++YTWG + LG GS
Sbjct: 3210 LGRGGSEGCDIPHNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRLGHGSDQH 3269
Query: 308 LHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGH 366
+ P V+ SE + V+ G H A +G++ WG ++ H GQ G+
Sbjct: 3270 VRKPTLVES-LSEKKIVHVAVGALHCLCATDQGQVYAWG---------DNDH---GQQGN 3316
Query: 367 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + P++V E V+ +V+CG +H+ A
Sbjct: 3317 GTILVNRKPSLVLNLEGVRVNRVACGSSHSIA 3348
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 166/386 (43%), Gaps = 57/386 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG P C A L G L +T G VYATG G+
Sbjct: 3973 WGHNHRGQLGGVEGPKVKIPTSCEALSALRPVQLVGGEQTLLAVTSDGKVYATGYGAGGR 4032
Query: 103 LGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
LG+ LE ++ +KK V +++G H A++ DG++Y WG+ +G+LG G
Sbjct: 4033 LGLGGTDTILTPTLLESIQHIFIKK--VAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHG 4090
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
K P ++ L G A G S AVT GG++ +WG G GRLGHG
Sbjct: 4091 NKNG--CDHPQLIDALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRYGRLGHGD----- 4143
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S + P+L++ L G KV A +G + CI ++ V+ +GD K+ +
Sbjct: 4144 ----SEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD 4199
Query: 277 HARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
+ P +L G +YTWG + LG GS + + P+++
Sbjct: 4200 GCKIPMKIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGSDEHVRHPKKI 4259
Query: 315 QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
+ ++ G H A S+ G++ TW G + GQLG G ++ I
Sbjct: 4260 AA-LQGKKIICIATGSLHCVACSDLGEVFTW------------GDNDEGQLGDGT-MNAI 4305
Query: 374 H-PTIVNFGENVKALQVSCGFNHTGA 398
H P +V + +V+CG H+ A
Sbjct: 4306 HRPRLVVTLQGKNINRVACGSAHSLA 4331
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 115/228 (50%), Gaps = 23/228 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNGD GRLG G SR +P + ++ ++CG ++ +T +G VY G ++G+
Sbjct: 545 WGNGDGGRLGHGDNNSRDQPTKITELVGKNVIHISCGATYSAAVTSSGEVYTWGRGNYGR 604
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGL-- 157
LG + +++ P + GLK +V I+ +G + A+T G ++ WG G+LG
Sbjct: 605 LGHGTSEDHTV-PTLVVGLKDYFIVDIACGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGG 663
Query: 158 --GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G K K+I E L I + G + S+A+T G V +WG G + RLGHG E+
Sbjct: 664 SDGSKTPKLI------EKLQDIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSEN 717
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L G +K A G H + ++G VY +G
Sbjct: 718 HV---------RFPKLVEGLNGKCIKKVAVGSGHVLALTDDGEVYGWG 756
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 95/178 (53%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG G+ E P + + + + +ACG A TL +T TG V++ G +
Sbjct: 597 WGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVDIACGSGDAQTLAVTNTGLVFSWGDGGY 656
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G S P I L+ EV ++ G S A+T G +Y WGK N +LG G
Sbjct: 657 GKLGTGGSDG-SKTPKLIEKLQDIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGS 715
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ + P VE L+G K+ A+G +A+T G+V WG +G++G E+++
Sbjct: 716 ENH--VRFPKLVEGLNGKCIKKVAVGSGHVLALTDDGEVYGWGRNDNGQVGETSETNV 771
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 60/286 (20%)
Query: 115 PLRISGLK---KEVVQISTGYHHSSAITV----DGELYMWGKNSNGQLGLGKKAAKVIPI 167
PL +S L +E+ ++ T SS + ++++WG N QLG G K +KV +
Sbjct: 2951 PLNVSFLATDYEEIPEVKTLSETSSHSKLWSDSPTKVFVWGLNDKDQLG-GLKGSKV-KV 3008
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P E L+ + A G + V+ GK+ + G G +GRLG G +++
Sbjct: 3009 PVYSESLTALKPIHIAGGSKSLFIVSYDGKLYACGEGTNGRLGLGHSNNV---------A 3059
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
TP + L +K A +HS G HA +L G
Sbjct: 3060 TPCQLTSLNQYVIKKVA---VHSG-----------------------GKHAM--ALTLDG 3091
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGW 346
++++WG E+G LG + L P+ ++ S+ + ++CG H+AAIS G++ TWG
Sbjct: 3092 KVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKR-IRDIACGSSHSAAISSTGELFTWGL 3150
Query: 347 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
G G+LGHG+++ + P +V +QV+CG
Sbjct: 3151 G------------EYGRLGHGDNLTQLRPKLVKALLGHHIVQVACG 3184
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 114/254 (44%), Gaps = 57/254 (22%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + KV IPT E LS + Q G + +AVT GKV +
Sbjct: 3968 GTIYGWGHNHRGQLG-GVEGPKV-KIPTSCEALSALRPVQLVGGEQTLLAVTSDGKVYAT 4025
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
G G GRLG G +IL TP L++ ++ + +K A +G H + +G+V
Sbjct: 4026 GYGAGGRLGLGGTDTIL---------TPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKV 4076
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
Y+WG ++G LG G+ + P+ +
Sbjct: 4077 ------------------------------YSWGEGDDGKLGHGNKNGCDHPQLIDALQG 4106
Query: 320 ESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
+ VD ++CG H+AA++ G+I TWG G G+LGHG+ D + P +V
Sbjct: 4107 KEIVD-IACGGAHSAAVTAGGEIYTWGKG------------RYGRLGHGDSEDQMKPKLV 4153
Query: 379 NFGENVKALQVSCG 392
K + ++CG
Sbjct: 4154 ETLIGFKVIDIACG 4167
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD RLG GS P + +K +A G H L LT+ G VY G ND GQ
Sbjct: 703 WGKGDNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVGSGHVLALTDDGEVYGWGRNDNGQ 762
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
+G + S EP ++ L+ K +V I G + S A
Sbjct: 763 VGETSETNVS-EPTLLTLLQGKNIVDIDCGPNQSIA 797
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 35/186 (18%)
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI---------------FGDRAVD 268
TS + I+EL GVK + A +L + G+VYI F + +
Sbjct: 466 TSPQSCDSIREL-GVKQIVCAERWL--LILTLTGKVYIMYYSSETQCPEQIEGFDGKEIS 522
Query: 269 KMLFQ-EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
K+ +G H+ +L G++Y+WG+ + G LG G + P ++ ++ V +S
Sbjct: 523 KLAAHADGKHSL--ALSCDGDVYSWGNGDGGRLGHGDNNSRDQPTKITELVGKN-VIHIS 579
Query: 328 CGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG ++AA+ S G++ TWG G G+LGHG D+ PT+V ++
Sbjct: 580 CGATYSAAVTSSGEVYTWGRGNY------------GRLGHGTSEDHTVPTLVVGLKDYFI 627
Query: 387 LQVSCG 392
+ ++CG
Sbjct: 628 VDIACG 633
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 100/229 (43%), Gaps = 48/229 (20%)
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC-IDE 255
K+ S G RL + + + FL + E P +VK + HS D
Sbjct: 2933 KIHSLLITGKKRLVNDELPLNVSFLATDYEEIP---------EVKTLSETSSHSKLWSDS 2983
Query: 256 NGRVYIFGDRAVDKM-----------LFQEGNHARRPSLISGG-----------ELYTWG 293
+V+++G D++ ++ E A +P I+GG +LY G
Sbjct: 2984 PTKVFVWGLNDKDQLGGLKGSKVKVPVYSESLTALKPIHIAGGSKSLFIVSYDGKLYACG 3043
Query: 294 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC--GWKHTAAIS-EGKILTWGWGGSH 350
NG LG+G + + +P ++ ++ + +V+ G KH A++ +GK+ +WG G
Sbjct: 3044 EGTNGRLGLGHSNNVATPCQLTS-LNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEG--- 3099
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
EDG +LGH N + P ++ ++ + ++CG +H+ A+
Sbjct: 3100 ----EDG-----KLGHDNRLSLDRPKMIEALKSKRIRDIACGSSHSAAI 3139
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 81/215 (37%), Gaps = 53/215 (24%)
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+ S+A++ G V SWG G GRLGHG + S P I EL G V + G
Sbjct: 531 KHSLALSCDGDVYSWGNGDGGRLGHGD---------NNSRDQPTKITELVGKNVIHISCG 581
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSID 306
+SA + S GE+YTWG G LG G+ +
Sbjct: 582 ATYSAAV------------------------------TSSGEVYTWGRGNYGRLGHGTSE 611
Query: 307 VLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL 364
P V G VD ++CG T A++ L + WG G S G +
Sbjct: 612 DHTVPTLVVGLKDYFIVD-IACGSGDAQTLAVTNTG-LVFSWGDGGYGKLGTGGSDGSKT 669
Query: 365 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
P ++ ++++ +V CG + AL
Sbjct: 670 ----------PKLIEKLQDIEVARVYCGSQFSLAL 694
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ D G+LG G++ + RP + + ++ +ACG AH+L + AT
Sbjct: 4289 WGDNDEGQLGDGTMNAIHRPRLVVTLQGKNINRVACGSAHSLAWSTNKSTSAT------H 4342
Query: 103 LGISENIGYSL-EPLRISGLKKEVVQISTGYHHSSAITVDGELY-MWGKNSNGQL 155
L + + Y L + + L+ +V + +H S ++ + ++ M G+ S QL
Sbjct: 4343 LPVDAPMEYDLVRDISLPTLRNRLVLL---HHFSELVSPNVAMFPMEGEGSLDQL 4394
>gi|358335048|dbj|GAA31002.2| E3 ubiquitin-protein ligase HERC4 [Clonorchis sinensis]
Length = 1185
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 174/390 (44%), Gaps = 62/390 (15%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG D +LG +S+ P + ++ +ACG HTLFL G VY+ G N+F
Sbjct: 12 WGACDDNQLGPHEQDSQQISSPQPITVPNPWTIAHVACGYKHTLFLNADGEVYSCGGNEF 71
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG S++ + RI+ L+ + I+ G +H++AI+ G L+ WG NSNGQLG
Sbjct: 72 GQLGRSDSPS---DFRRITALENHTITDIACGAYHNAAISYTGRLFTWGCNSNGQLGREG 128
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ V + L+ Q +LG E S+ +T ++ +G+ G+LG LG
Sbjct: 129 DDSSV----KMIRSLAEHRVVQVSLGLEHSLVLTDTSRLFVFGSNIWGQLG-------LG 177
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-------LF 272
F P+ + L G+ ++ +AG +HSA + +G +Y++G ++ +
Sbjct: 178 FRSDLPIVIPQQLMCLAGLPIRCISAGGVHSAVLTISGTLYVWGGNKYGQLGLEPIETVA 237
Query: 273 QEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS---ESPVDQVS-- 327
E R S+ + W N+ G LG+ I+ + + E V G S +P VS
Sbjct: 238 AETVSGSRSSIENAP---VWCGNKYGQLGLEPIETVAA-ETVSGSRSSIENAPQHSVSVP 293
Query: 328 ---------------CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
CG HT ++ EG + T+ G + GQLGHG
Sbjct: 294 TAVRSLKGQRAVFVDCGESHTVVLTEEGGVFTY------------GGNQFGQLGHGESSK 341
Query: 372 YIH-PTIVNFGENVKALQVSCGFNHTGALL 400
+ P V + QV+CG HT L+
Sbjct: 342 SVSIPRKVADLMDNPTTQVACGRMHTLVLV 371
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 159/357 (44%), Gaps = 43/357 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G ++G+LG S +R + +A E H++ +ACG H ++ TG ++ G N GQL
Sbjct: 67 GGNEFGQLGRSDSPSDFRRI--TALENHTITDIACGAYHNAAISYTGRLFTWGCNSNGQL 124
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
G E S++ +R S + VVQ+S G HS +T L+++G N GQLGLG ++
Sbjct: 125 G-REGDDSSVKMIR-SLAEHRVVQVSLGLEHSLVLTDTSRLFVFGSNIWGQLGLGFRSDL 182
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL-- 221
I IP ++ CL+G+ + + G S +T G + WG G+LG ++
Sbjct: 183 PIVIPQQLMCLAGLPIRCISAGGVHSAVLTISGTLYVWGGNKYGQLGLEPIETVAAETVS 242
Query: 222 --RSTSEYTPRL---------IKELEGVKVKIAAA-------GFLHSACIDENGRVYIFG 263
RS+ E P ++ +E V + + HS + R + G
Sbjct: 243 GSRSSIENAPVWCGNKYGQLGLEPIETVAAETVSGSRSSIENAPQHSVSVPTAVR-SLKG 301
Query: 264 DRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
RAV F + + L G ++T+G N+ G LG G S R ++P
Sbjct: 302 QRAV----FVDCGESHTVVLTEEGGVFTYGGNQFGQLGHGESSKSVSIPRKVADLMDNPT 357
Query: 324 DQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
QV+CG HT + S G + +G G S GQLG + D PT+V
Sbjct: 358 TQVACGRMHTLVLVPSLGCVYAFGAG------------SEGQLGTNTNTDSSRPTLV 402
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 77/172 (44%), Gaps = 4/172 (2%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG YG+LGL +E+ V + + CG + E A
Sbjct: 219 VWGGNKYGQLGLEPIETVAAETVSGSRSSIENAPVWCGNKYGQLGLEPIETVAAETVSGS 278
Query: 102 QLGISENIGYSLE-PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+ I +S+ P + LK + V + G H+ +T +G ++ +G N GQLG G
Sbjct: 279 RSSIENAPQHSVSVPTAVRSLKGQRAVFVDCGESHTVVLTEEGGVFTYGGNQFGQLGHG- 337
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQS-VAVTGGGKVLSWGAGGSGRLG 210
+++K + IP KV L T Q A G + V V G V ++GAG G+LG
Sbjct: 338 ESSKSVSIPRKVADLMDNPTTQVACGRMHTLVLVPSLGCVYAFGAGSEGQLG 389
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 66/153 (43%), Gaps = 22/153 (14%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVC---SAFE---KHSLKA--------------LACG 79
A +W YG+LGL +E+ V S+ E +HS+ + CG
Sbjct: 251 APVWCGNKYGQLGLEPIETVAAETVSGSRSSIENAPQHSVSVPTAVRSLKGQRAVFVDCG 310
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAI 138
+HT+ LTE G V+ G N FGQLG E+ P +++ L Q++ G H+ +
Sbjct: 311 ESHTVVLTEEGGVFTYGGNQFGQLGHGESSKSVSIPRKVADLMDNPTTQVACGRMHTLVL 370
Query: 139 TVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
G +Y +G S GQLG P K
Sbjct: 371 VPSLGCVYAFGAGSEGQLGTNTNTDSSRPTLVK 403
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 81/208 (38%), Gaps = 48/208 (23%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
L+ WG + QLG ++ ++ I P + + A G++ ++ + G+V S G
Sbjct: 9 LFGWGACDDNQLGPHEQDSQQISSPQPITVPNPWTIAHVACGYKHTLFLNADGEVYSCGG 68
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LG RS S R I LE + A G H+A I GR
Sbjct: 69 NEFGQLG-----------RSDSPSDFRRITALENHTITDIACGAYHNAAISYTGR----- 112
Query: 264 DRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
L+TWG N NG LG D S ++ +E V
Sbjct: 113 -------------------------LFTWGCNSNGQLGREGDD---SSVKMIRSLAEHRV 144
Query: 324 DQVSCGWKHTAAISE-GKILTWG---WG 347
QVS G +H+ +++ ++ +G WG
Sbjct: 145 VQVSLGLEHSLVLTDTSRLFVFGSNIWG 172
>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
Length = 3806
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 137/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 2752 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 2811
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L + VVQ++ G + A+T DG ++ WG G+LG G
Sbjct: 2812 LGHGDNT-TQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 2870
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 2871 SEGS--DTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 2926
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ I L G +V A G LH + + G+V
Sbjct: 2927 -------RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV-------------------- 2959
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
Y WG N++G G G+ V P V G V++V+CG H+ A
Sbjct: 2960 ----------YAWGDNDHGQQGSGNTFVNKKPALVIG-LDAVFVNRVACGSSHSIA 3004
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 159/349 (45%), Gaps = 54/349 (15%)
Query: 79 GGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF+ ++ G VYA G G+LG+ L P ++ L + VV+ + +G H
Sbjct: 2681 GGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 2739
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+T+DG+++ WG+ +G+LG G + + P VE L + A G S A++
Sbjct: 2740 ALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVEALRAKKIRDVACGSSHSAAISS 2797
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+L+ L G +V A G +
Sbjct: 2798 QGELYTWGLGEYGRLGHGD---------NTTQLKPKLVTALAGRRVVQVACGSRDAQTLA 2848
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRP----------------------SLISGGELY 290
+ E+G V+ +GD K+ + P +L GE++
Sbjct: 2849 LTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVW 2908
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG G + P+ + G V V+ G H A+++ G++ WG
Sbjct: 2909 TWGKGDYYRLGHGGDQHVRKPQPIGG-LRGRRVIHVAVGALHCLAVTDAGQVYAWG---- 2963
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G GN P +V + V +V+CG +H+ A
Sbjct: 2964 -----DNDH---GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3004
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDF 100
WG G Y RLG G+ + R P + A H + AL G AH+L LT G V+A G D+
Sbjct: 346 WGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDY 405
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + N SL+P+ + L + V ++ G S A++ +G+LY WGK + L ++
Sbjct: 406 GKLG-NGNCNGSLQPILVESLPR-VQRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVER 463
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ + +P V L A+ +A++ G+V WG S ++ SS
Sbjct: 464 SVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPASVSS 519
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 15/224 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ RLG G +R P +A E+H ++++ CG +++ +T G + G + +
Sbjct: 294 WGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYAR 353
Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + SL L ++ VV ++ +G HS A+T +G ++ WG G+LG G
Sbjct: 354 LGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNC 413
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILG 219
+ PI VE L + ++ G + SVA++ G++ +WG LGH E S+ G
Sbjct: 414 NGSLQPI--LVESLPRV--QRVFAGSQFSVALSSEGQLYTWGKATC--LGHQLVERSVQG 467
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
PRL+ L+ ++ A H + +G V+ +G
Sbjct: 468 C------SVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWG 505
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 117/269 (43%), Gaps = 56/269 (20%)
Query: 128 ISTGYHHSSAIT---VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ST + ++A + + +WG N QLG G K +KV +PT + +S + A
Sbjct: 2624 VSTSHEEAAAAPEQDLPCTVMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIAG 2681
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G + V+ GKV + G G +GRLG G ++ P + L VK A
Sbjct: 2682 GSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNV---------PLPHQLPVLHQYVVKKVA 2732
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGS 304
+HS G HA +L G++++WG E+G LG G+
Sbjct: 2733 ---VHSG-----------------------GKHAL--ALTLDGKVFSWGEGEDGKLGHGN 2764
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQ 363
L P V+ + V+CG H+AAIS +G++ TWG G G+
Sbjct: 2765 RTTLDKPRLVEA-LRAKKIRDVACGSSHSAAISSQGELYTWGLG------------EYGR 2811
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCG 392
LGHG++ + P +V + +QV+CG
Sbjct: 2812 LGHGDNTTQLKPKLVTALAGRRVVQVACG 2840
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 128/325 (39%), Gaps = 60/325 (18%)
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
ES P + F+ +K +AC L L++ G +Y L EPL
Sbjct: 215 ESAGVPTLSCRFQ---IKQVACCETQMLILSQEGKLYTWRLAK-----------PEAEPL 260
Query: 117 RISGLKKEVVQISTGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
+ + +V IS H H AI + Y WG + +LG G A+ +PTK+
Sbjct: 261 PMEEVAHDVF-ISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARA--VPTKIA 317
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
L + G S A+T GG +L+WG G RLGHG S P L+
Sbjct: 318 ALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGN---------SDDRSLPTLV 368
Query: 233 KEL-EGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI------ 284
L + + V +A +G HS + G V+ +GD K+ N + +P L+
Sbjct: 369 VALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRV 428
Query: 285 --------------SGGELYTWGSNENGCLGIG----SIDVLHSPERVQGPFSESPVDQV 326
S G+LYTWG + CLG S+ P V + VD V
Sbjct: 429 QRVFAGSQFSVALSSEGQLYTWG--KATCLGHQLVERSVQGCSVPRLVSSLQHKRIVD-V 485
Query: 327 SCGWKHTAAI-SEGKILTWGWGGSH 350
+ H A+ S G++ WG S
Sbjct: 486 AVSVAHCLALSSSGEVFGWGRNDSQ 510
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 56/118 (47%), Gaps = 20/118 (16%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQ---VSCGWKHTAAIS-EGKI 341
G++Y G NG LG+G V H+ P Q P V + V G KH A++ +GK+
Sbjct: 2693 GKVYACGEGTNGRLGLG---VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 2749
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+WG G EDG +LGHGN P +V K V+CG +H+ A+
Sbjct: 2750 FSWGEG-------EDG-----KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAI 2795
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
Y+WG+ E+ LG G P ++ + V V CG ++AAI+ G +LTWG
Sbjct: 292 YSWGTGEDHRLGHGDTHARAVPTKIAA-LEQHCVQSVYCGCSYSAAITCGGNLLTWG--- 347
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
GT++ +LGHGN D PT+V
Sbjct: 348 -RGTYA--------RLGHGNSDDRSLPTLV 368
>gi|357137056|ref|XP_003570117.1| PREDICTED: uncharacterized protein LOC100825305 isoform 2
[Brachypodium distachyon]
Length = 940
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 169/373 (45%), Gaps = 58/373 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P + ++ + ++ ++CG H +T+ G V++ G D G+LG ++G L P I L
Sbjct: 194 PRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGV-LHPKIIESL 252
Query: 122 K-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFT 179
V I+ G H+ A+ + GEL+ WG+ ++ + + P K+ L G+
Sbjct: 253 AFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSV 312
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
+ A G + ++ G++ ++G G G LGHG SS+ P+ ++ L+G++
Sbjct: 313 VKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVA---------RPKEVESLKGLR 363
Query: 240 VKIAAAGFLHSACIDE----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISG--- 286
VK A G H+A I E +G+++ +GD K+ + P+ +
Sbjct: 364 VKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALTD 423
Query: 287 -------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
G ++T GS E+G LG +D S V+GP V ++S
Sbjct: 424 SDFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDD-SSICSVEGPLKTEFVREIS 482
Query: 328 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
G H A ++ GK+ TWG G + GQLG GN VD PT+V E+ +
Sbjct: 483 SGSSHVAVLTMNGKVFTWGKG------------TEGQLGLGNYVDRSSPTLVEALEDKQV 530
Query: 387 LQVSCGFNHTGAL 399
++CG N T A+
Sbjct: 531 DSIACGSNFTVAV 543
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ D G+LG ES+ P A ++C A T+ LT TG V+ G + GQ
Sbjct: 396 WGDADRGKLGHSDKESKLVPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEHGQ 455
Query: 103 LG---ISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
LG + ++ S+E PL+ ++ +IS+G H + +T++G+++ WGK + GQLGLG
Sbjct: 456 LGSHRLDDSSICSVEGPLKTEFVR----EISSGSSHVAVLTMNGKVFTWGKGTEGQLGLG 511
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ PT VE L A G +VAV
Sbjct: 512 NYVDR--SSPTLVEALEDKQVDSIACGSNFTVAV 543
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 99/227 (43%), Gaps = 31/227 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE----------TGCV 92
+G+G +G LG G S RP + + +KA+ACG HT + E +G +
Sbjct: 334 YGDGTFGVLGHGDTSSVARPKEVESLKGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKL 393
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNS 151
+ G D G+LG S+ L P + L + Q+S + A+T+ G ++ G
Sbjct: 394 FTWGDADRGKLGHSDKES-KLVPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKE 452
Query: 152 NGQLG---LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
+GQLG L + + P K E F ++ + G +T GKV +WG G G+
Sbjct: 453 HGQLGSHRLDDSSICSVEGPLKTE-----FVREISSGSSHVAVLTMNGKVFTWGKGTEGQ 507
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG--FLHSACI 253
LG G +P L++ LE +V A G F + C+
Sbjct: 508 LGLGN---------YVDRSSPTLVEALEDKQVDSIACGSNFTVAVCL 545
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 123/310 (39%), Gaps = 62/310 (20%)
Query: 98 NDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
N F L +++ I + I+ + K ++ S G H + ++++WG L
Sbjct: 130 NSFQDLTVADTI----KEQGITQMPK--LKPSEGSHVAYGTDSLKDIFVWGDVLGSVLDD 183
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ + +P + + + + G + + VT G+V SWG GRLGH +
Sbjct: 184 RDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGV 243
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
L P++I+ L VK A G H+
Sbjct: 244 LH---------PKIIESLAFTHVKAIAFGAKHTC-------------------------- 268
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHS---PERVQGPFSESPVDQVSCGWKHTA 334
+L GEL+ WG + LG+ S P ++ GP V +++CG HTA
Sbjct: 269 ----ALAISGELFEWGEGTHS-LGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWHTA 323
Query: 335 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 393
IS G++ T+G GTF G LGHG+ P V + ++ V+CG
Sbjct: 324 IISSSGQLFTYG----DGTF--------GVLGHGDTSSVARPKEVESLKGLRVKAVACGP 371
Query: 394 NHTGALLEYV 403
HT A++E +
Sbjct: 372 WHTAAIVEIL 381
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 128/314 (40%), Gaps = 69/314 (21%)
Query: 43 WGNGDYGRLGL---GSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
WG G + LG+ S+W P + E S+ +ACG HT ++ +G ++ G
Sbjct: 279 WGEGTHS-LGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGDG 337
Query: 99 DFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAIT----------VDGELYMW 147
FG LG + + P + LK V ++ G H++AI G+L+ W
Sbjct: 338 TFGVLGHGDTSSVA-RPKEVESLKGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTW 396
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--- 204
G G+LG K +K+ +PT V+ L+ Q + +VA+T G V + G+
Sbjct: 397 GDADRGKLGHSDKESKL--VPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEHG 454
Query: 205 --GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
GS RL S+ G L++ ++E+ ++G H A + NG+V
Sbjct: 455 QLGSHRLDDSSICSVEGPLKT------EFVREI--------SSGSSHVAVLTMNGKV--- 497
Query: 263 GDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
+TWG G LG+G+ SP V+ +
Sbjct: 498 ---------------------------FTWGKGTEGQLGLGNYVDRSSPTLVEA-LEDKQ 529
Query: 323 VDQVSCGWKHTAAI 336
VD ++CG T A+
Sbjct: 530 VDSIACGSNFTVAV 543
>gi|334330728|ref|XP_001378629.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Monodelphis
domestica]
Length = 531
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 132/301 (43%), Gaps = 49/301 (16%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTIVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGMVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+V++++ G HHS A+ DGE+Y WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADGEVYAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
TP + L V V G+ H+ +L
Sbjct: 223 -TPCRVAALHSVCVLQIVCGYAHTL------------------------------ALTDE 251
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTW 344
G LY WG+N G LG G+ L SP ++ E V+ +C HT+A G + W
Sbjct: 252 GLLYAWGANTYGQLGTGNKSNLLSPAQIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMW 310
Query: 345 G 345
G
Sbjct: 311 G 311
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G VYA G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADGEVYAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +V L + Q G+ ++A+T G + +WGA G+LG G +S++L
Sbjct: 218 NGNQLTP--CRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAQIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 125/291 (42%), Gaps = 55/291 (18%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSANEAIYVTHNDEVFVFGLNCSNCLGTGDNQSTI--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGMVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYT 291
IK++ V A G HS +L + GE+Y
Sbjct: 127 IKQVIEV-----ACGSHHSM------------------------------ALAADGEVYA 151
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 350
WG N G +G GS +P +V V ++CG + A+ G++ WG+ G+
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGN- 210
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GQLG GN+ + + P V +V LQ+ CG+ HT AL +
Sbjct: 211 -----------GQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTD 250
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P +I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKSNLLSPAQIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
>gi|357137054|ref|XP_003570116.1| PREDICTED: uncharacterized protein LOC100825305 isoform 1
[Brachypodium distachyon]
Length = 1005
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 169/373 (45%), Gaps = 58/373 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P + ++ + ++ ++CG H +T+ G V++ G D G+LG ++G L P I L
Sbjct: 259 PRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGV-LHPKIIESL 317
Query: 122 K-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFT 179
V I+ G H+ A+ + GEL+ WG+ ++ + + P K+ L G+
Sbjct: 318 AFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSV 377
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
+ A G + ++ G++ ++G G G LGHG SS+ P+ ++ L+G++
Sbjct: 378 VKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVA---------RPKEVESLKGLR 428
Query: 240 VKIAAAGFLHSACIDE----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISG--- 286
VK A G H+A I E +G+++ +GD K+ + P+ +
Sbjct: 429 VKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALTD 488
Query: 287 -------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
G ++T GS E+G LG +D S V+GP V ++S
Sbjct: 489 SDFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDD-SSICSVEGPLKTEFVREIS 547
Query: 328 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
G H A ++ GK+ TWG G + GQLG GN VD PT+V E+ +
Sbjct: 548 SGSSHVAVLTMNGKVFTWGKG------------TEGQLGLGNYVDRSSPTLVEALEDKQV 595
Query: 387 LQVSCGFNHTGAL 399
++CG N T A+
Sbjct: 596 DSIACGSNFTVAV 608
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ D G+LG ES+ P A ++C A T+ LT TG V+ G + GQ
Sbjct: 461 WGDADRGKLGHSDKESKLVPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEHGQ 520
Query: 103 LG---ISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
LG + ++ S+E PL+ ++ +IS+G H + +T++G+++ WGK + GQLGLG
Sbjct: 521 LGSHRLDDSSICSVEGPLKTEFVR----EISSGSSHVAVLTMNGKVFTWGKGTEGQLGLG 576
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ PT VE L A G +VAV
Sbjct: 577 NYVDR--SSPTLVEALEDKQVDSIACGSNFTVAV 608
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 99/227 (43%), Gaps = 31/227 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE----------TGCV 92
+G+G +G LG G S RP + + +KA+ACG HT + E +G +
Sbjct: 399 YGDGTFGVLGHGDTSSVARPKEVESLKGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKL 458
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNS 151
+ G D G+LG S+ L P + L + Q+S + A+T+ G ++ G
Sbjct: 459 FTWGDADRGKLGHSDKES-KLVPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKE 517
Query: 152 NGQLG---LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
+GQLG L + + P K E F ++ + G +T GKV +WG G G+
Sbjct: 518 HGQLGSHRLDDSSICSVEGPLKTE-----FVREISSGSSHVAVLTMNGKVFTWGKGTEGQ 572
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG--FLHSACI 253
LG G +P L++ LE +V A G F + C+
Sbjct: 573 LGLGN---------YVDRSSPTLVEALEDKQVDSIACGSNFTVAVCL 610
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 123/310 (39%), Gaps = 62/310 (20%)
Query: 98 NDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
N F L +++ I + I+ + K ++ S G H + ++++WG L
Sbjct: 195 NSFQDLTVADTI----KEQGITQMPK--LKPSEGSHVAYGTDSLKDIFVWGDVLGSVLDD 248
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ + +P + + + + G + + VT G+V SWG GRLGH +
Sbjct: 249 RDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGV 308
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
L P++I+ L VK A G H+
Sbjct: 309 LH---------PKIIESLAFTHVKAIAFGAKHTC-------------------------- 333
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHS---PERVQGPFSESPVDQVSCGWKHTA 334
+L GEL+ WG + LG+ S P ++ GP V +++CG HTA
Sbjct: 334 ----ALAISGELFEWGEGTHS-LGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWHTA 388
Query: 335 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 393
IS G++ T+G GTF G LGHG+ P V + ++ V+CG
Sbjct: 389 IISSSGQLFTYG----DGTF--------GVLGHGDTSSVARPKEVESLKGLRVKAVACGP 436
Query: 394 NHTGALLEYV 403
HT A++E +
Sbjct: 437 WHTAAIVEIL 446
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 128/314 (40%), Gaps = 69/314 (21%)
Query: 43 WGNGDYGRLGL---GSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
WG G + LG+ S+W P + E S+ +ACG HT ++ +G ++ G
Sbjct: 344 WGEGTHS-LGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGDG 402
Query: 99 DFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAIT----------VDGELYMW 147
FG LG + + P + LK V ++ G H++AI G+L+ W
Sbjct: 403 TFGVLGHGDTSSVA-RPKEVESLKGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTW 461
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--- 204
G G+LG K +K+ +PT V+ L+ Q + +VA+T G V + G+
Sbjct: 462 GDADRGKLGHSDKESKL--VPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEHG 519
Query: 205 --GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
GS RL S+ G L++ ++E+ ++G H A + NG+V
Sbjct: 520 QLGSHRLDDSSICSVEGPLKT------EFVREI--------SSGSSHVAVLTMNGKV--- 562
Query: 263 GDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
+TWG G LG+G+ SP V+ +
Sbjct: 563 ---------------------------FTWGKGTEGQLGLGNYVDRSSPTLVEA-LEDKQ 594
Query: 323 VDQVSCGWKHTAAI 336
VD ++CG T A+
Sbjct: 595 VDSIACGSNFTVAV 608
>gi|50978834|ref|NP_001003126.1| X-linked retinitis pigmentosa GTPase regulator [Canis lupus
familiaris]
gi|23396836|sp|Q9N1T2.1|RPGR_CANFA RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
Flags: Precursor
gi|8131936|gb|AAF73144.1|AF148801_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 1003
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 160/358 (44%), Gaps = 57/358 (15%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL TE G VYA G N+ G
Sbjct: 58 MFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEG 117
Query: 102 QLGISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + S + ++++ Q+S G + S+A+T DGEL+MWG NS GQ+GL
Sbjct: 118 QLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENV 177
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+P V G + G+ S VT G++ ++G G+LG L
Sbjct: 178 TNVCVPQQVTV----GKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLG-------LPN 226
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ P+ + + G V++A G G + ++AV
Sbjct: 227 QLLVNHRMPQPVPGIPGKVVQVACGG----------GHTVVLTEKAV------------- 263
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-G 339
YT+G + G LG+G+ S + + + ++CG HTA I++ G
Sbjct: 264 ---------YTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMG 314
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCGFNHT 396
+ T+G G HG LG N + PT+ NF + L VSCG HT
Sbjct: 315 LMYTFG-DGRHGKLG---------LGLENSTNQFIPTLCSNFLRFIVQL-VSCGGCHT 361
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 146/325 (44%), Gaps = 52/325 (16%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + +S G H++ +T + +LYM+G N+ GQLGLG
Sbjct: 17 FGKTQFAENI-----PSKFWFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGS 71
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K+ + PT V+ L K AA G ++ T GGKV + G G+LG G
Sbjct: 72 KS--TVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERST 129
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F + + R IK+L +AG SA + E+G ++++GD + ++ + +
Sbjct: 130 FHLISFFTSQRKIKQL--------SAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVC 181
Query: 280 RPSLI--------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
P + + G+LYT+G E G LG+ + +++ R+ P
Sbjct: 182 VPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVN--HRMPQPVP 239
Query: 320 ESP--VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPT 376
P V QV+CG HT ++E + T+G G GQLG G + + P
Sbjct: 240 GIPGKVVQVACGGGHTVVLTEKAVYTFGLG------------QFGQLGLGTFLFETSVPK 287
Query: 377 IVNFGENVKALQVSCGFNHTGALLE 401
+ ++ K ++CG NHT + +
Sbjct: 288 AIEHIKDQKISFIACGENHTALITD 312
>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
Length = 826
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 151/319 (47%), Gaps = 42/319 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
G G YGRLGLG + P F+K +K ++ H+L LT TG VY+ G D+
Sbjct: 453 GKGSYGRLGLGDSNNCSVPKK-PLFDKKYVKKISSSKGSDGHSLALTTTGEVYSWGDGDY 511
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + + L L +VV+ +S GY HS+A+T DGELY WG G+LG
Sbjct: 512 GKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTEDGELYTWGDGEFGRLGHDY 571
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
++K PTKV+ + + A G ++AV+ GK + S+G G +G+LGHG
Sbjct: 572 TSSK--NFPTKVQSIESV--GLVACGGSHTLAVSQDGKTIWSFGGGENGKLGHGD----- 622
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-----------DRAV 267
+ + P++I+ L G+ ++ A G S + +G++Y +G A+
Sbjct: 623 ----TNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCGAILGCGSAEYTAL 678
Query: 268 DKMLFQEGNHARRPSLISG----------GELYTWGSNENGCLGIG-SIDVLHSPERVQG 316
L ++ R + G E+Y WG+N G G G + + P+RV G
Sbjct: 679 RPRLVEDLQSKRMVDIACGDSHVIALTHESEVYAWGNNAMGQCGQGHAQSPITRPKRVIG 738
Query: 317 PFSESPVDQVSCGWKHTAA 335
V QVS G H+ A
Sbjct: 739 -LDGVSVHQVSAGTSHSVA 756
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 123/234 (52%), Gaps = 30/234 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P +V +K ++ G H+ +TE G +Y G +FG
Sbjct: 506 WGDGDYGKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTEDGELYTWGDGEFG 565
Query: 102 QLG----ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLG 156
+LG S+N ++ + GL ++ G H+ A++ DG+ ++ +G NG+LG
Sbjct: 566 RLGHDYTSSKNFPTKVQSIESVGL------VACGGSHTLAVSQDGKTIWSFGGGENGKLG 619
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L+G++ ++ A G + S+AVT G++ +WG G +
Sbjct: 620 HGDTNRQL--KPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCG-----------A 666
Query: 217 ILGFLRSTSEYT---PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
ILG ++EYT PRL+++L+ ++ A G H + VY +G+ A+
Sbjct: 667 ILGC--GSAEYTALRPRLVEDLQSKRMVDIACGDSHVIALTHESEVYAWGNNAM 718
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 120/280 (42%), Gaps = 59/280 (21%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
+ S + + Q+ G + I DG + GK S G+LGLG +P K
Sbjct: 422 KYSAVFTDCQQVEAGQFCTFLIYSDGTVGACGKGSYGRLGLGDSNNCSVP---KKPLFDK 478
Query: 177 IFTKQ--AALGFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
+ K+ ++ G + S+A+T G+V SWG G G+LGHG S ++ P+L+K
Sbjct: 479 KYVKKISSSKGSDGHSLALTTTGEVYSWGDGDYGKLGHGTHS---------TQKIPKLVK 529
Query: 234 -ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW 292
L G VK +AG+ HSA + E+G ELYTW
Sbjct: 530 GPLVGKVVKCVSAGYRHSAAVTEDG------------------------------ELYTW 559
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT 352
G E G LG + P +VQ S V V+CG HT A+S+ W +GG
Sbjct: 560 GDGEFGRLGHDYTSSKNFPTKVQ---SIESVGLVACGGSHTLAVSQDGKTIWSFGGGE-- 614
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
G+LGHG+ + P ++ + +V+CG
Sbjct: 615 --------NGKLGHGDTNRQLKPKVIEALNGLYIRKVACG 646
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 4/153 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G G+ G+LG G + +P V A ++ +ACG +L +T +G +YA G
Sbjct: 610 FGGGENGKLGHGDTNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCGAILG 669
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G +E +L P + L+ K +V I+ G H A+T + E+Y WG N+ GQ G G A
Sbjct: 670 CGSAEYT--ALRPRLVEDLQSKRMVDIACGDSHVIALTHESEVYAWGNNAMGQCGQG-HA 726
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
I P +V L G+ Q + G SVA T
Sbjct: 727 QSPITRPKRVIGLDGVSVHQVSAGTSHSVAWTA 759
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 108/261 (41%), Gaps = 60/261 (22%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT--KQAALGFEQSVAVTGGGKVL 199
GE+Y+WG N QL G + P S +FT +Q G + + G V
Sbjct: 397 GEVYVWGSNCTHQLAEGGQEKITTPK------YSAVFTDCQQVEAGQFCTFLIYSDGTVG 450
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
+ G G GRLG G S + P+
Sbjct: 451 ACGKGSYGRLGLGD---------SNNCSVPK----------------------------K 473
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
+F + V K+ +G+ +L + GE+Y+WG + G LG G+ P+ V+GP
Sbjct: 474 PLFDKKYVKKISSSKGSDGHSLALTTTGEVYSWGDGDYGKLGHGTHSTQKIPKLVKGPLV 533
Query: 320 ESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
V VS G++H+AA++E G++ TWG G F G+LGH PT V
Sbjct: 534 GKVVKCVSAGYRHSAAVTEDGELYTWG----DGEF--------GRLGHDYTSSKNFPTKV 581
Query: 379 NFGENVKALQVSCGFNHTGAL 399
E+V V+CG +HT A+
Sbjct: 582 QSIESVGL--VACGGSHTLAV 600
>gi|395848168|ref|XP_003796731.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Otolemur
garnettii]
Length = 551
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 115/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++G K +V I+ G S A+ GE+++WG N NGQLGLG
Sbjct: 183 QVGSGSTANQPI-PRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGNGQLGLGS 241
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P ++ L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 242 SGNQ--PTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 293
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y ++ E + V ++IAA H SA + G VY++G
Sbjct: 294 --KSNQSYPTPVVVEKDRV-IEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 117/229 (51%), Gaps = 22/229 (9%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGL 97
+ G G LGLG ++S P + S K +AC G H + T G V+ G
Sbjct: 69 VLGTNCCGCLGLGDIQSTIEP---RKLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGH 125
Query: 98 NDFGQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
N + QLG + + L P IS K+V++++ G +HS +T DGE++ WG N++GQ+
Sbjct: 126 NAYSQLG-NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQV 184
Query: 156 GLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
G G A + PIP +V CL A G S+AV G+V WG G+G+LG G
Sbjct: 185 GSGSTANQ--PIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGNGQLGLGS- 241
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S ++ TP I L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 242 --------SGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 154/368 (41%), Gaps = 67/368 (18%)
Query: 45 NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
NG+ G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 9 NGESGKPIRATLSSLKMLDVGKWPMFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
G N G LG+ + I ++EP ++ L K++ +S G H T +GE++ WG N+
Sbjct: 69 VLGTNCCGCLGLGD-IQSTIEPRKLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNA 127
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QLG G ++P LS + A G S+ +T G+V +WG SG++G
Sbjct: 128 YSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G + ++ PR + + C+ V I A +M
Sbjct: 187 GS---------TANQPIPRRV-----------------TGCLQNKVIVTI----ACGQMC 216
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 331
+++ GE++ WG N NG LG+GS +P R+ V +V+CG+
Sbjct: 217 SM--------AVVDTGEVFVWGYNGNGQLGLGSSGNQPTPCRI-AALQGIRVQRVACGYA 267
Query: 332 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 390
HT ++ EG++ WG +S GQLG GN + +PT V ++ +
Sbjct: 268 HTLVLTDEGQVYAWG------------ANSYGQLGTGNKSNQSYPTPVVVEKDRVIEIAA 315
Query: 391 CGFNHTGA 398
C HT A
Sbjct: 316 CHSAHTSA 323
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K V++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRVIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 341 --SVVLPYLTHFSCTDDVF 357
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 111/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P K++ LSG K A L + V T
Sbjct: 62 TVNDEIFVLGTNCCGCLGLGDIQSTIEP--RKLDSLSG--KKIACLSYGSGPHVVLATTE 117
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLV--- 166
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 167 ---------------------------LTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G + ++CG + A+ + G++ WG+ G+ GQLG G+ +
Sbjct: 200 GCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGN------------GQLGLGSSGNQPT 247
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P + + ++ +V+CG+ HT L +
Sbjct: 248 PCRIAALQGIRVQRVACGYAHTLVLTD 274
>gi|296189286|ref|XP_002742716.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Callithrix jacchus]
Length = 556
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 113/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 187
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++G K VV I+ G A+ GE+Y+WG N NGQLGLG
Sbjct: 188 QVGSGSTVNQP-TPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGN 246
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 247 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 298
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y + E + + ++IAA H SA + G VY++G
Sbjct: 299 --KSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 340
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 113/226 (50%), Gaps = 16/226 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
+ G G LGLG ++S P + + L+ G G H + T G V+ G N +
Sbjct: 74 VLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAY 133
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG + + L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G
Sbjct: 134 SQLG-NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSG 192
Query: 159 KKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ P P +V CL A G +AV G+V WG G+G+LG G
Sbjct: 193 STVNQ--PTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGN---- 246
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S ++ TP + L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 247 -----SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 147/347 (42%), Gaps = 60/347 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 35 KWPIFSLCSEEELQLIRQACVFGGAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 93
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 94 PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 153
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ TPR +
Sbjct: 154 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPTPRRV 203
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW 292
+ C+ V I A +M +++ GE+Y W
Sbjct: 204 -----------------TGCLQNKVVVTI----ACGQMCCM--------AVVDSGEVYVW 234
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 351
G N NG LG+G+ +P RV V +V+CG+ HT ++ EG++ WG
Sbjct: 235 GYNGNGQLGLGNSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWG------ 287
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 288 ------ANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA 328
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 111/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ LSG K A L + V T
Sbjct: 67 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIACLSYGSGPHIVLATTE 122
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 123 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSL---- 170
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS +P RV
Sbjct: 171 --------------------------VLTSDGEVFAWGYNNSGQVGSGSTVNQPTPRRVT 204
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG A+ + G++ WG+ G+ GQLG GN +
Sbjct: 205 GCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGN------------GQLGLGNSGNQPT 252
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 253 PCRVAALQGIRVQRVACGYAHTLVLTD 279
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 233 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 292
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 293 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 345
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 346 --SVILPHLTHFSCTDDVF 362
>gi|149730315|ref|XP_001489590.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Equus
caballus]
Length = 551
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 125/244 (51%), Gaps = 18/244 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
+ G G LGLG ++S P + + L+ G G H + T G V+ G N +
Sbjct: 69 VLGTNCCGCLGLGDVQSTIEPRRLDSLTGKKVACLSYGSGPHVVLATSEGEVFTWGHNAY 128
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG + + L P IS K V++++ G +HS +T DGE++ WG N++GQ+G G
Sbjct: 129 SQLG-NGTTNHGLVPCHISTNLSNKRVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSG 187
Query: 159 KKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
A + PIP +V CL A G S+AV G+V WG G+G+LG G
Sbjct: 188 STANQ--PIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYSGNGQLGLGG---- 241
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S ++ TP + L+G++V+ AA G+ H+ + + G+VY++G + ++ GN
Sbjct: 242 -----SGNQPTPCRVAALQGIRVQRAACGYAHTLVLTDEGQVYVWGANSYGQL--GTGNK 294
Query: 278 ARRP 281
+ +P
Sbjct: 295 SNQP 298
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 140/349 (40%), Gaps = 64/349 (18%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 30 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 88
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K+V +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 89 PRRLDSLTGKKVACLSYGSGPHVVLATSEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 149 -LSNKRVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198
Query: 233 KEL--EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
V V IA A +D GE+Y
Sbjct: 199 TGCLQNKVVVNIACGQMCSMAVVDT-------------------------------GEVY 227
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGS 349
WG + NG LG+G +P RV V + +CG+ HT ++ EG++ WG
Sbjct: 228 VWGYSGNGQLGLGGSGNQPTPCRV-AALQGIRVQRAACGYAHTLVLTDEGQVYVWG---- 282
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT + ++ +C HT A
Sbjct: 283 --------ANSYGQLGTGNKSNQPYPTPIIVEKDRIIEIAACHSTHTSA 323
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 109/267 (40%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ L+G K A L + V T
Sbjct: 62 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLTG--KKVACLSYGSGPHVVLATSE 117
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKRVIEV--------ACGSYHSL---- 165
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 166 --------------------------VLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG + A+ + G++ WG+ G+ GQLG G +
Sbjct: 200 GCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYSGN------------GQLGLGGSGNQPT 247
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ + +CG+ HT L +
Sbjct: 248 PCRVAALQGIRVQRAACGYAHTLVLTD 274
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 70/139 (50%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG ++ P +A + ++ ACG AHTL LT+ G VY G N +G
Sbjct: 228 VWGYSGNGQLGLGGSGNQPTPCRVAALQGIRVQRAACGYAHTLVLTDEGQVYVWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + N P I K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLG-TGNKSNQPYPTPIIVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 341 --SVVLPHLTHFSCTDDVF 357
>gi|431902378|gb|ELK08879.1| RCC1 and BTB domain-containing protein 2 [Pteropus alecto]
Length = 621
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 117/229 (51%), Gaps = 22/229 (9%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGL 97
+ G G LGLG ++S P + S K +AC G H + T G ++ G
Sbjct: 139 VLGTNCCGCLGLGDIQSTIEP---RRLDSLSGKKIACFSYGSGPHVILATTEGEIFTWGH 195
Query: 98 NDFGQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
N + QLG + + L P IS K+V++++ G +HS +T DGE++ WG N++GQ+
Sbjct: 196 NAYSQLG-NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQV 254
Query: 156 GLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
G G A + PIP +V CL A G SVAV G+V WG G+G+LG G
Sbjct: 255 GSGSTANQ--PIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGNGQLGLGS- 311
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S ++ TP I L+G+ V+ A G+ H+ + + G+VY++G
Sbjct: 312 --------SGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWG 352
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 113/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 193 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 252
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++G K VV I+ G S A+ +GE+Y+WG N NGQLGLG
Sbjct: 253 QVGSGSTANQPI-PRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGNGQLGLGS 311
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P ++ L GI ++ A G+ ++ +T G+V WGA G+LG G
Sbjct: 312 SGNQ--STPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWGANSYGQLGTGN------ 363
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y + E + + ++IAA H SA + G VY++G
Sbjct: 364 --KSNQSYPTPVAVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 405
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 144/348 (41%), Gaps = 62/348 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + I ++E
Sbjct: 100 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYSTVNDEIFVLGTNCCGCLGLGD-IQSTIE 158
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ S G H T +GE++ WG N+ QLG G ++P
Sbjct: 159 PRRLDSLSGKKIACFSYGSGPHVILATTEGEIFTWGHNAYSQLGNGTTNHGLVPCHISTN 218
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 219 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 268
Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYT 291
KV + A G + S + +NG VY+
Sbjct: 269 TGCLQNKVVVNIACGQMCSVAVVDNGEVYV------------------------------ 298
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSH 350
WG N NG LG+GS +P R+ V +V+CG+ HT ++ EG++ WG
Sbjct: 299 WGYNGNGQLGLGSSGNQSTPCRIAA-LQGICVQRVACGYAHTLVLTDEGQVYVWG----- 352
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 353 -------ANSYGQLGTGNKSNQSYPTPVAVEKDRIIEIAACHSTHTSA 393
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VY G N +G
Sbjct: 298 VWGYNGNGQLGLGSSGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWGANSYG 357
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 358 QLGTGNKSNQSY-PTPVAVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 410
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 411 --SVILPHLTSFSCTDDVF 427
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 109/267 (40%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ LSG K A + + T
Sbjct: 132 TVNDEIFVLGTNCCGCLGLGDIQSTIEP--RRLDSLSG--KKIACFSYGSGPHVILATTE 187
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G++ +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 188 GEIFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLV--- 236
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 237 ---------------------------LTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 269
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG + A+ + G++ WG+ G+ GQLG G+ +
Sbjct: 270 GCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGN------------GQLGLGSSGNQST 317
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P + + + +V+CG+ HT L +
Sbjct: 318 PCRIAALQGICVQRVACGYAHTLVLTD 344
>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Metaseiulus occidentalis]
Length = 4496
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 169/384 (44%), Gaps = 56/384 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG +C A +L+ + GG TLF LT G VYATG
Sbjct: 3624 WGHNHRGQLGGVEGAKVKTATICDALT--ALRPVQIVGGEQTLFALTSDGKVYATGYGAG 3681
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LGI S P I L+ +V +++G H A+T G+++ WG+ +G+LG
Sbjct: 3682 GRLGIGGTESVS-TPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGH 3740
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G KA + P +E L A G S +T G++ +WG G GRLGHG
Sbjct: 3741 GSKA--LCERPKLIESLRDKHVVSVACGGAHSACITASGELYTWGKGRYGRLGHGD---- 3794
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGD----------- 264
S + P+ ++EL G V A +G + C+ +G V+ +GD
Sbjct: 3795 -----SEDQLKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGS 3849
Query: 265 ------RAVDKM-----LFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ +D + + E +L + G +YTWG + LG GS D + P+
Sbjct: 3850 DGCKFPQKIDSLQNAGVIKVECGSQFSVALTAAGVVYTWGKGDYHRLGHGSEDHVRRPQA 3909
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
VQG V QV+ G H A ++ G++ TW G + GQLG G+
Sbjct: 3910 VQGALQGKRVIQVAVGSLHCVACTDSGEVFTW------------GDNDEGQLGDGSTNAI 3957
Query: 373 IHPTIVNFGENVKALQVSCGFNHT 396
P +V + K +V+CG HT
Sbjct: 3958 QRPKLVASLKGKKMNRVACGSAHT 3981
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 129/256 (50%), Gaps = 23/256 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + + + ++ +ACG +H+ +T +G +Y G ++G+
Sbjct: 2763 WGEGEDGKLGHGNKISYDRPKLVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSGEYGR 2822
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N+ L+P ++ L E VVQ++ G + A+T +Y WG G+LG G
Sbjct: 2823 LGHGDNVP-QLKPKQVRALSHERVVQVACGSRDAQTLALTERHWVYSWGDGDFGKLGKGG 2881
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+P VE L+ Q G + S+A++ GKV +WG G RLGHG +S +
Sbjct: 2882 SDGS--SLPQNVETLNSQQVIQVECGAQFSLALSKNGKVWTWGKGDYFRLGHGSDSHV-- 2937
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN--- 276
P++++EL V + G LH + + G VY +GD Q+GN
Sbjct: 2938 -------RWPQVVEELADKNVIQVSVGALHCIAVTDRGEVYAWGDNDHG----QQGNGNT 2986
Query: 277 -HARRPSLISGGELYT 291
R+P+++ G E T
Sbjct: 2987 TVNRKPAIVRGLEAIT 3002
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 135/302 (44%), Gaps = 47/302 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG GS RP + + + ++ACGGAH+ +T +G +Y G +G+
Sbjct: 3730 WGEGDDGKLGHGSKALCERPKLIESLRDKHVVSVACGGAHSACITASGELYTWGKGRYGR 3789
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV--DGELYMWGKNSNGQLGLGK 159
LG ++ L+P ++ L V+ ++ G + + V DG ++ WG G+LG G
Sbjct: 3790 LGHGDSED-QLKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRG- 3847
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P K++ L + G + SVA+T G V +WG G RLGHG E +
Sbjct: 3848 -GSDGCKFPQKIDSLQNAGVIKVECGSQFSVALTAAGVVYTWGKGDYHRLGHGSEDHV-- 3904
Query: 220 FLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P+ ++ L+G +V A G LH ++G V+
Sbjct: 3905 -------RRPQAVQGALQGKRVIQVAVGSLHCVACTDSGEVF------------------ 3939
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
TWG N+ G LG GS + + P+ V +++V+CG HT + S
Sbjct: 3940 ------------TWGDNDEGQLGDGSTNAIQRPKLV-ASLKGKKMNRVACGSAHTVSWST 3986
Query: 339 GK 340
K
Sbjct: 3987 SK 3988
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 141/321 (43%), Gaps = 42/321 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + +P + + +K +A GG H L LT G V++ G + G
Sbjct: 2710 GEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHALALTIDGRVFSWGEGEDG 2769
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG I Y P + LK K + ++ G HS+A+T GELY WG G+LG G
Sbjct: 2770 KLGHGNKISYD-RPKLVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSGEYGRLGHGDN 2828
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P +V LS Q A G Q++A+T V SWG G G+LG G
Sbjct: 2829 VPQL--KPKQVRALSHERVVQVACGSRDAQTLALTERHWVYSWGDGDFGKLGKGG----- 2881
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S P+ ++ L +V G S + +NG+V+ +G ++ +H
Sbjct: 2882 ----SDGSSLPQNVETLNSQQVIQVECGAQFSLALSKNGKVWTWGKGDYFRLGHGSDSHV 2937
Query: 279 RRPSLI----------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R P ++ GE+Y WG N++G G G+ V P V+G
Sbjct: 2938 RWPQVVEELADKNVIQVSVGALHCIAVTDRGEVYAWGDNDHGQQGNGNTTVNRKPAIVRG 2997
Query: 317 PFSESPVDQVSCGWKHTAAIS 337
+ V+CG H+ A S
Sbjct: 2998 ---LEAITNVACGSSHSVAWS 3015
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 176/401 (43%), Gaps = 72/401 (17%)
Query: 13 YLKQDIKLGSKLGICKRWISSTLQRRFAA---LWGNGDYGRLG--LGSL--ESRWRPVVC 65
+L Q+ + KLGI + S +++ +WG D +LG GS E ++ V+
Sbjct: 2626 FLAQETE--CKLGIVNQMGSPSMRENIECKVFVWGLNDKDQLGGLKGSKIKEPKFSEVI- 2682
Query: 66 SAFEKHSLKAL-ACGGAHTLFL-TETGCVYATGLNDFGQLGI--SENIGYSLEPLRISGL 121
+LK + GG+ +LF+ + G V+A G G+LG+ S N+ +S
Sbjct: 2683 -----SNLKPMNIAGGSKSLFIVSHDGKVFACGEGTNGRLGLGHSHNVAQPKPLTDLSPY 2737
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+ V + +G H+ A+T+DG ++ WG+ +G+LG G K + P VE L +
Sbjct: 2738 FIKKVAVHSGGRHALALTIDGRVFSWGEGEDGKLGHGNKIS--YDRPKLVESLKCKRIRD 2795
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
A G S AVT G++ +WG+G GRLGHG + + P+ ++ L +V
Sbjct: 2796 VACGSSHSAAVTSSGELYTWGSGEYGRLGHGD---------NVPQLKPKQVRALSHERVV 2846
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLG 301
A G A+ +L +Y+WG + G LG
Sbjct: 2847 QVACG----------------------------SRDAQTLALTERHWVYSWGDGDFGKLG 2878
Query: 302 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSS 360
G D P+ V+ S+ V QV CG + + A+S+ GK+ TWG G
Sbjct: 2879 KGGSDGSSLPQNVETLNSQQ-VIQVECGAQFSLALSKNGKVWTWGKGDYF---------- 2927
Query: 361 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHG+D P +V + +QVS G H A+ +
Sbjct: 2928 --RLGHGSDSHVRWPQVVEELADKNVIQVSVGALHCIAVTD 2966
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 126/336 (37%), Gaps = 102/336 (30%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G ++ WG N GQLG G + AKV
Sbjct: 3619 GVIHGWGHNHRGQLG-GVEGAKVKTATICDALTALRPVQIVGGEQTLFALTSDGKVYATG 3677
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E L + Q A+ G + +A+T G V SWG G G+
Sbjct: 3678 YGAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGK 3737
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG----- 263
LGHG ++ P+LI+ L V A G HSACI +G +Y +G
Sbjct: 3738 LGHGSKALC---------ERPKLIESLRDKHVVSVACGGAHSACITASGELYTWGKGRYG 3788
Query: 264 --------DRAVDKMLFQEGNH-----------ARRPSLISGGELYTWGSNENGCLGIGS 304
D+ K + + H A+ + G +++WG + G LG G
Sbjct: 3789 RLGHGDSEDQLKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGG 3848
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQ 363
D P+++ + V +V CG + + A++ G + TWG G H +
Sbjct: 3849 SDGCKFPQKIDS-LQNAGVIKVECGSQFSVALTAAGVVYTWGKGDYH------------R 3895
Query: 364 LGHGNDVDYIHPTIVNFG-ENVKALQVSCGFNHTGA 398
LGHG++ P V + + +QV+ G H A
Sbjct: 3896 LGHGSEDHVRRPQAVQGALQGKRVIQVAVGSLHCVA 3931
>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
Length = 1345
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 166/363 (45%), Gaps = 65/363 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
G G YGRLG+G+ + + SA + + + +A H+L LT++G V++ G D+
Sbjct: 543 GEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDY 602
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVV ++ G+ HS+ +TVDG+L+ +G G+LG G
Sbjct: 603 GKLG-HGNSDRQRRPRQIEALRGEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGHGN 661
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSIL 218
A K P +V L Q A G ++ ++ G V ++G G G+LG G
Sbjct: 662 SANK--KTPERVTALEKHAIGQVACGLNHTLVLSADGNTVWAFGDGDYGKLGLGS----- 714
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
T++ +P+ I L G+ K G S + +GRV+ FG +++ Q
Sbjct: 715 ----CTAKTSPQAIDVLAGIGCKKICCGTQFSVVLTNDGRVFSFGQ---ERLTGQPEGRL 767
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-S 337
R P P+++Q + +D V G +H A+ S
Sbjct: 768 RGP---------------------------QKPQQIQA-LASHFIDDVCVGAEHVLALTS 799
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF--GENVKALQVSCGFNH 395
G++ WGWG ++ GQLG G+ P ++ G+N++ Q+S G NH
Sbjct: 800 TGEV--WGWG----------NNVDGQLGLGHSNAQREPCVIPDLKGKNIR--QISAGRNH 845
Query: 396 TGA 398
+ A
Sbjct: 846 SAA 848
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 138/295 (46%), Gaps = 45/295 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + +ACG H+ +T G ++ G D+G+
Sbjct: 597 WGDGDYGKLGHGNSDRQRRPRQIEALRGEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGR 656
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
LG N P R++ L+K + Q++ G +H+ ++ DG ++ +G G+LGLG
Sbjct: 657 LG-HGNSANKKTPERVTALEKHAIGQVACGLNHTLVLSADGNTVWAFGDGDYGKLGLGSC 715
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P ++ L+GI K+ G + SV +T G+V S+ GQE
Sbjct: 716 TAKT--SPQAIDVLAGIGCKKICCGTQFSVVLTNDGRVFSF----------GQE------ 757
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R T + RL + +++ A+ F+ C+ G ++
Sbjct: 758 -RLTGQPEGRLRGPQKPQQIQALASHFIDDVCV---GAEHVL------------------ 795
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
+L S GE++ WG+N +G LG+G + P + + Q+S G H+AA
Sbjct: 796 -ALTSTGEVWGWGNNVDGQLGLGHSNAQREPCVIPD-LKGKNIRQISAGRNHSAA 848
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 113/276 (40%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
Q+ G + + + V+G + G+ S G+LG+G P + L G Q A
Sbjct: 522 QVVCGQNCTFVVQVNGTILACGEGSYGRLGMGNSDDLFTLSP--ISALQGYVVIQIATSR 579
Query: 187 E---QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
S+A+T G+V SWG G G+LGHG S + PR I+ L G +V
Sbjct: 580 GSDGHSLALTDSGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALRGEEVVNM 630
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
A GF HSA + +G+++ FG+ G++ R LG G
Sbjct: 631 ACGFKHSAVVTVDGKLFTFGN----------GDYGR--------------------LGHG 660
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ +PERV + + QV+CG HT +S W +G DG G+
Sbjct: 661 NSANKKTPERVTA-LEKHAIGQVACGLNHTLVLSADGNTVWAFG--------DGDY--GK 709
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG G+ P ++ + ++ CG + L
Sbjct: 710 LGLGSCTAKTSPQAIDVLAGIGCKKICCGTQFSVVL 745
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 112/261 (42%), Gaps = 61/261 (23%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+ Y+WG +GQL ++ + + +PT + L+ +Q G + V G +L+ G
Sbjct: 489 DAYLWGGGRHGQLA---ESGRGVNVPTVTKSLAS--AQQVVCGQNCTFVVQVNGTILACG 543
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG-VKVKIAAA--GFLHSACIDENGRV 259
G GRLG G + +T I L+G V ++IA + HS + ++G V
Sbjct: 544 EGSYGRLGMGNSDDL---------FTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEV 594
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
++WG + G LG G+ D P +++
Sbjct: 595 ------------------------------FSWGDGDYGKLGHGNSDRQRRPRQIEALRG 624
Query: 320 ESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
E V+ ++CG+KH+A ++ +GK+ T+G G G+LGHGN + P V
Sbjct: 625 EEVVN-MACGFKHSAVVTVDGKLFTFGNGDY------------GRLGHGNSANKKTPERV 671
Query: 379 NFGENVKALQVSCGFNHTGAL 399
E QV+CG NHT L
Sbjct: 672 TALEKHAIGQVACGLNHTLVL 692
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 54 GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
G L +P A H + + G H L LT TG V+ G N GQLG+ +
Sbjct: 765 GRLRGPQKPQQIQALASHFIDDVCVGAEHVLALTSTGEVWGWGNNVDGQLGLGHS-NAQR 823
Query: 114 EPLRISGLK-KEVVQISTGYHHSSAIT 139
EP I LK K + QIS G +HS+A T
Sbjct: 824 EPCVIPDLKGKNIRQISAGRNHSAAWT 850
>gi|226507778|ref|NP_001140994.1| uncharacterized protein LOC100273073 [Zea mays]
gi|194702086|gb|ACF85127.1| unknown [Zea mays]
gi|413922319|gb|AFW62251.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 1 [Zea mays]
gi|413922320|gb|AFW62252.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 2 [Zea mays]
Length = 389
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 160/379 (42%), Gaps = 69/379 (18%)
Query: 31 ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
+++ L+ WG+G+ G+LG+G E + P A +++ A+ G ++L + + G
Sbjct: 1 MATPLRATAVLAWGSGEDGQLGMGGNEEKDWPHFVEALGPYAVTAVVAGSRNSLAICDDG 60
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGK 149
++ G N G LG P + L ++VQ + G H A+ G Y WG
Sbjct: 61 RLFTWGWNQRGTLGHPPETKTESSPGPVDALAGFKIVQAAIGGWHCLAVDDKGRAYAWGG 120
Query: 150 NSNGQLGL-------GKKA-AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
N GQ G G +A + IPIP + C + +Q A G SV +T G V +W
Sbjct: 121 NEYGQCGEEPERKEDGTRALRRDIPIPQR--CALKLKVRQVAAGGTHSVVLTQEGHVWTW 178
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G + G ++ S TP ++ LE KV++ A G H+ + E+
Sbjct: 179 G-----------QPWPPGDIKQIS--TPVRVQGLE--KVRVIAVGAFHNLALTED----- 218
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+I L+ WG+NE G LG G P RV+G S
Sbjct: 219 ---------------------VI----LWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLS 253
Query: 322 PVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND-VDYIHPTIVNF 380
VD + GW TA +G++ WG G H G+LG G+D ++ P V
Sbjct: 254 LVDIAAGGWHSTALTIDGEVYAWG-RGEH-----------GRLGFGDDKSSHMVPLKVEL 301
Query: 381 GENVKALQVSCGFNHTGAL 399
+QVSCG H+ AL
Sbjct: 302 LAGEDIVQVSCGGTHSVAL 320
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 106/196 (54%), Gaps = 7/196 (3%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV EK ++ +A G H L LTE ++A G N++GQLG + S +P+R+ GL
Sbjct: 193 PVRVQGLEK--VRVIAVGAFHNLALTEDVILWAWGNNEYGQLGTGDTQPRS-QPIRVEGL 249
Query: 122 KK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
+V I+ G HS+A+T+DGE+Y WG+ +G+LG G + + +P KVE L+G
Sbjct: 250 SDLSLVDIAAGGWHSTALTIDGEVYAWGRGEHGRLGFGDDKSSHM-VPLKVELLAGEDIV 308
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-K 239
Q + G SVA+ G++ S+G G GRLG+G++ + G P L +G +
Sbjct: 309 QVSCGGTHSVALARDGRMFSYGRGDHGRLGYGRKVTT-GHPMELPINLPPLSSSRDGRWQ 367
Query: 240 VKIAAAGFLHSACIDE 255
K A G H+ I E
Sbjct: 368 AKYVACGGRHTLAIAE 383
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 76/136 (55%), Gaps = 3/136 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG+LG G + R +P+ SL +A GG H+ LT G VYA G + G+
Sbjct: 224 WGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTIDGEVYAWGRGEHGR 283
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ + PL++ L +++VQ+S G HS A+ DG ++ +G+ +G+LG G+K
Sbjct: 284 LGFGDDKSSHMVPLKVELLAGEDIVQVSCGGTHSVALARDGRMFSYGRGDHGRLGYGRKV 343
Query: 162 AKVIP--IPTKVECLS 175
P +P + LS
Sbjct: 344 TTGHPMELPINLPPLS 359
>gi|444917133|ref|ZP_21237237.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444711259|gb|ELW52206.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 1081
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 162/378 (42%), Gaps = 64/378 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ + PV A LA G H L ++ G V++ G N GQ
Sbjct: 726 WGDNSLGQLGNGATSAS--PVPVQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQ 783
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG E P ++G + + ++ G S A++ DG ++ WG N +GQLG G A
Sbjct: 784 LGY-EGSATQTSPRWLTG-PECIEAVAAGALFSLALSCDGGVWAWGDNGSGQLGDGAVTA 841
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P +V L+ + A G + ++AV G V +WGA GSG+LG G
Sbjct: 842 RT--APARVPGLAHVVAIAA--GSDHALAVRADGTVWAWGANGSGQLGDGT--------- 888
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+TS P +KEL V V A G HS + +G V+ +G ++ P
Sbjct: 889 TTSRAVPMQVKEL--VDVVAVAGGSGHSLAVRADGTVWAWGANGSGQLGDGTTTSRTLPV 946
Query: 283 LIS--------------------GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
+S GG ++ WG+N +G LG G+ P +V G S
Sbjct: 947 FVSTLSGVQAIASGAQHSLALAEGGVVWAWGANGSGQLGDGTTTSRTRPVQVSG---LSG 1003
Query: 323 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN----DVDYIHPTIV 378
V + G + A++ GK+ +W G++S GQLG G PT+
Sbjct: 1004 VQGLVAGASFSLALTPGKVWSW------------GNNSAGQLGDGTLNSRSQPGAGPTLS 1051
Query: 379 NFGENVKALQVSCGFNHT 396
+F + +S G HT
Sbjct: 1052 SF------VALSAGAQHT 1063
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 139/295 (47%), Gaps = 44/295 (14%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
++A+A G +L L+ G V+A G N GQLG + P R+ GL VV I+ G
Sbjct: 804 IEAVAAGALFSLALSCDGGVWAWGDNGSGQLGDGA-VTARTAPARVPGLA-HVVAIAAGS 861
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK--VECLSGIFTKQAALGFEQSV 190
H+ A+ DG ++ WG N +GQLG G ++ +P+ K V+ ++ A G S+
Sbjct: 862 DHALAVRADGTVWAWGANGSGQLGDGTTTSRAVPMQVKELVDVVA------VAGGSGHSL 915
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
AV G V +WGA GSG+LG G +TS P + L GV+ A+G HS
Sbjct: 916 AVRADGTVWAWGANGSGQLGDGT---------TTSRTLPVFVSTLSGVQA--IASGAQHS 964
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG-------------------GELYT 291
+ E G V+ +G ++ RP +SG G++++
Sbjct: 965 LALAEGGVVWAWGANGSGQLGDGTTTSRTRPVQVSGLSGVQGLVAGASFSLALTPGKVWS 1024
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 345
WG+N G LG G+++ P GP S V +S G +HT + S+ L+WG
Sbjct: 1025 WGNNSAGQLGDGTLNSRSQPG--AGPTLSSFV-ALSAGAQHTVVLRSDDSFLSWG 1076
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 147/358 (41%), Gaps = 54/358 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS R P + + +LA G H G V+A G N +GQ
Sbjct: 373 WGANGSGQLGNGSSSVRALPGRVPSLTAGA--SLAAGDHHVFLRQADGSVWAWGDNTYGQ 430
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+R+S V +S +HS A+ DG ++ WG N+ GQ LG +
Sbjct: 431 LGDGTLVSRP-APVRLSSTLTSVRALSASSYHSLALRSDGTVWAWGDNAYGQ--LGDTSG 487
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P P +V ++G + A G S+A+ G V +WG G+LG G
Sbjct: 488 GRRPSPAQVPGVAG--ATEIAAGTYHSLALRSDGTVWTWGDNSYGQLGAG---------- 535
Query: 223 STSEYTPRLIKELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ PR + G+ V AAG HS +D +G+V+ +GD ++ P
Sbjct: 536 -ATPRGPRAPAVVPGLAVITHVAAGLFHSLALDSSGQVWAWGDNVYGQLGDGSTTSRNVP 594
Query: 282 SLISG---------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
+SG G ++TWG N NG LG G+ P RV P +
Sbjct: 595 GRVSGLPAGIQAIVAGPSYSVALGADGSVWTWGENSNGQLGDGTTTARPVPARVSLPAT- 653
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
+ +S HT A+ +L W W G + GQLG+G V P V
Sbjct: 654 --LVALSTRGSHTVALDTTGML-WAW----------GRNVSGQLGNGTLVSESTPRRV 698
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 167/375 (44%), Gaps = 57/375 (15%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ YG+LG G+ R P V + +A G H+L L +G V+A G N +G
Sbjct: 524 WGDNSYGQLGAGATPRGPRAPAVVPGLAV--ITHVAAGLFHSLALDSSGQVWAWGDNVYG 581
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG ++ P R+SGL + I G +S A+ DG ++ WG+NSNGQLG G
Sbjct: 582 QLGDGSTTSRNV-PGRVSGLPAGIQAIVAGPSYSVALGADGSVWTWGENSNGQLGDGTTT 640
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
A+ P+P +V L + G +VA+ G + +WG SG+LG+G
Sbjct: 641 AR--PVPARV-SLPATLVALSTRG-SHTVALDTTGMLWAWGRNVSGQLGNGTL------- 689
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----------L 271
SE TPR + +V+ A+G + + +G V+ +GD ++ ++
Sbjct: 690 --VSESTPRRVPSF--ARVQGFASGLRTTFALRADGTVWAWGDNSLGQLGNGATSASPVP 745
Query: 272 FQEGNHARRPSLISG----------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
Q + R L SG G ++++GSN G LG SP + GP
Sbjct: 746 VQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQLGYEGSATQTSPRWLTGPEC-- 803
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
++ V+ G + A+S +G + WG GS GQLG G P V
Sbjct: 804 -IEAVAAGALFSLALSCDGGVWAWGDNGS------------GQLGDGAVTARTAPARVPG 850
Query: 381 GENVKALQVSCGFNH 395
+V A ++ G +H
Sbjct: 851 LAHVVA--IAAGSDH 863
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 168/380 (44%), Gaps = 57/380 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R PV +L AL+ G+HT+ L TG ++A G N GQ
Sbjct: 626 WGENSNGQLGDGTTTAR--PVPARVSLPATLVALSTRGSHTVALDTTGMLWAWGRNVSGQ 683
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S P R+ + V ++G + A+ DG ++ WG NS GQLG G +A
Sbjct: 684 LGNGTLVSES-TPRRVPSFAR-VQGFASGLRTTFALRADGTVWAWGDNSLGQLGNGATSA 741
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+P V+ + T A G + +AV+ G V S+G+ G+ LG+
Sbjct: 742 SPVP----VQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQ---------LGYEG 788
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV----DKMLFQEGNHA 278
S ++ +PR + E ++ AAG L S + +G V+ +GD D + A
Sbjct: 789 SATQTSPRWLTGPE--CIEAVAAGALFSLALSCDGGVWAWGDNGSGQLGDGAVTARTAPA 846
Query: 279 RRPSLI----------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
R P L + G ++ WG+N +G LG G+ P +V+
Sbjct: 847 RVPGLAHVVAIAAGSDHALAVRADGTVWAWGANGSGQLGDGTTTSRAVPMQVKELVD--- 903
Query: 323 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
V V+ G H+ A+ ++G + WG GS GQLG G P V+
Sbjct: 904 VVAVAGGSGHSLAVRADGTVWAWGANGS------------GQLGDGTTTSRTLPVFVSTL 951
Query: 382 ENVKALQVSCGFNHTGALLE 401
V+A ++ G H+ AL E
Sbjct: 952 SGVQA--IASGAQHSLALAE 969
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 146/328 (44%), Gaps = 70/328 (21%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
LA G H+L++T G V+A G N GQLG + +S P ++ GL V ++ G HS
Sbjct: 53 LAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHS-TPTQVVGLTG-VTAVAAGNTHS 110
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ +G ++ WG N++GQLG G V P +V L+G+ A G S+A+
Sbjct: 111 MALREEGTVWTWGTNTDGQLGDGVSQRSV---PAQVAGLTGV--TAIAAGNLHSLALI-N 164
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG +G+LG G STS TP + L +V AAG HS +
Sbjct: 165 GAVWAWGNNTTGQLGDGS---------STSRSTPAKVAGL--TEVVAIAAGDFHSLALKR 213
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
+G V + WG N +G LG G++D +P RV
Sbjct: 214 DGTV------------------------------WAWGGNYSGQLGDGTLDSRSTPVRVS 243
Query: 316 GPFSESPVDQVSCGWKHTAAISE----GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
G + + ++ G H+ A S GK+ W G ++ GQLG+G DV
Sbjct: 244 G---LTGIVALAGGGSHSVAASSTTLGGKVWAW------------GDNTYGQLGNGGDVS 288
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ P V V AL + G +H+ AL
Sbjct: 289 SLLPLEVPGLTQVVAL--ASGTSHSLAL 314
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 165/375 (44%), Gaps = 63/375 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G + R V + A+A G H+L L G V+A G N GQ
Sbjct: 122 WGTNTDGQLGDGVSQ---RSVPAQVAGLTGVTAIAAGNLHSLALIN-GAVWAWGNNTTGQ 177
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S P +++GL EVV I+ G HS A+ DG ++ WG N +GQLG G +
Sbjct: 178 LGDGSSTSRS-TPAKVAGLT-EVVAIAAGDFHSLALKRDGTVWAWGGNYSGQLGDGTLDS 235
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVA---VTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P+ +V L+GI A G SVA T GGKV +WG G+LG+G + S L
Sbjct: 236 RSTPV--RVSGLTGIVAL--AGGGSHSVAASSTTLGGKVWAWGDNTYGQLGNGGDVSSL- 290
Query: 220 FLRSTSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
L E+ G+ +A A+G HS + + V+ +GD A Q G
Sbjct: 291 -----------LPLEVPGLTQVVALASGTSHSLALRGDDSVWAWGDNA-QAQTAQTGTSV 338
Query: 279 RR-PSLISG---------GELYT-----------WGSNENGCLGIGSIDVLHSPERVQGP 317
+R P +SG G ++ WG+N +G LG GS V P RV
Sbjct: 339 QRVPVRVSGVSDAQALACGNAFSLVGRGDNVTLGWGANGSGQLGNGSSSVRALPGRVP-- 396
Query: 318 FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT- 376
S + ++ G H + + W W G ++ GQLG G V P
Sbjct: 397 -SLTAGASLAAG-DHHVFLRQADGSVWAW----------GDNTYGQLGDGTLVSRPAPVR 444
Query: 377 IVNFGENVKALQVSC 391
+ + +V+AL S
Sbjct: 445 LSSTLTSVRALSASS 459
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 77/160 (48%), Gaps = 9/160 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ SR PV S ++A+A G H+L L E G V+A G N GQ
Sbjct: 926 WGANGSGQLGDGTTTSRTLPVFVSTLSG--VQAIASGAQHSLALAEGGVVWAWGANGSGQ 983
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+++SGL V + G S A+T G+++ WG NS GQLG G +
Sbjct: 984 LGDGTTTSRT-RPVQVSGLSG-VQGLVAGASFSLALT-PGKVWSWGNNSAGQLGDGTLNS 1040
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+ P LS A G + +V + LSWG
Sbjct: 1041 R--SQPGAGPTLSSFVALSA--GAQHTVVLRSDDSFLSWG 1076
>gi|30695429|ref|NP_199644.2| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|26450138|dbj|BAC42188.1| regulator of chromosome condensation like [Arabidopsis thaliana]
gi|28973207|gb|AAO63928.1| putative regulator of chromosome condensation (cell cycle
regulatory protein) [Arabidopsis thaliana]
gi|332008269|gb|AED95652.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 455
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 194/443 (43%), Gaps = 86/443 (19%)
Query: 25 GICKRWISSTL-QRRFAALWGNGDYGRLGLGSLE------SRWRPVVCSAFEKHSLKALA 77
G+ +R +ST +RR +G+G+ G LGL S + P V S + +++
Sbjct: 30 GVVRRQFTSTSGERRTVMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPS-DISSIS 88
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLEPLRISGLKKEVVQ--ISTGY 132
G H+L +T +G ++A G ND GQLG I + EP R+ GL+ VQ ++G
Sbjct: 89 AGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGV 148
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
S+AI DG L++WG++ GQLGLG + +P++VE L+ + +LG+ ++A+
Sbjct: 149 V-SAAIGDDGSLWVWGRSKRGQLGLGNGIIEA-RVPSRVENLAAEHVVKVSLGWGHALAL 206
Query: 193 TGGGKVLSWGAGGSGRLGH---GQESSILGFLRSTS------------------------ 225
T GKV WG GR+G+ E+S+L + S
Sbjct: 207 TVDGKVFGWGYVADGRVGNVGLPLEASLLDSITDGSMKGHHAAGDLNLEAAEKKVVEAMS 266
Query: 226 -------EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY-----IFGD--RAVDKML 271
+ P L++E KV A G HS + +G + I+G R+ +
Sbjct: 267 KENDMPIAWEPCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLG 326
Query: 272 FQEGNHARRPSLISGG-------------ELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
+ + P I+ G + +WG N + LG G + L P V+G
Sbjct: 327 MKPVDITESPISIAAGLGHSLAICNRGERNILSWGWNRSRQLGRGKPENL--PREVEGFD 384
Query: 319 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 377
ESP VS G H+ ++E G+ WG G G+LG G+ D P +
Sbjct: 385 GESPA-SVSAGRVHSLCVTEKGEAWVWGCG------------KNGRLGLGSSSDEPEPML 431
Query: 378 VNFGENVKALQVSCGFNHTGALL 400
+ E LQ GF+H+ L+
Sbjct: 432 LEDVEGC-VLQAVAGFDHSLILV 453
>gi|218201187|gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
Length = 395
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 150/367 (40%), Gaps = 69/367 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LG+G E +A + ++ A+ G ++L + G ++ G N G
Sbjct: 16 WGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTWGWNQRGT 75
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL---- 157
LG P + L +VQ + G H A+ G Y WG N GQ G
Sbjct: 76 LGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEAER 135
Query: 158 ---GKKA-AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
G +A + IPIP + C + +Q A G SV +T G V +WG
Sbjct: 136 KEDGTRALRRDIPIPQR--CAPKLKVRQVAAGGTHSVVLTQDGHVWTWG----------- 182
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
+ G ++ S TP ++ LE VK+ A G H+ + E+G
Sbjct: 183 QPWPPGDIKQIS--TPVRVQGLE--NVKVIAVGAFHNLALTEDGI--------------- 223
Query: 274 EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 333
L+ WG+NE G LG G P RV+G S VD + GW T
Sbjct: 224 ---------------LWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHST 268
Query: 334 AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND-VDYIHPTIVNFGENVKALQVSCG 392
A EG++ WG G H G+LG G+D ++ P V +QVSCG
Sbjct: 269 ALTKEGEVYAWG-RGEH-----------GRLGFGDDKSSHMVPQKVELLAGEDIIQVSCG 316
Query: 393 FNHTGAL 399
H+ AL
Sbjct: 317 GTHSVAL 323
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 93/154 (60%), Gaps = 5/154 (3%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV E ++K +A G H L LTE G ++A G N++GQLG + S +P+R+ GL
Sbjct: 196 PVRVQGLE--NVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRS-QPIRVEGL 252
Query: 122 KK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
+V I+ G HS+A+T +GE+Y WG+ +G+LG G + + +P KVE L+G
Sbjct: 253 SDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHM-VPQKVELLAGEDII 311
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
Q + G SVA+T G++ S+G G GRLG+G++
Sbjct: 312 QVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRK 345
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 136/308 (44%), Gaps = 47/308 (15%)
Query: 40 AALWGNGDYGRLGLGSLES--------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
A WG +YG+ G + R P+ K ++ +A GG H++ LT+ G
Sbjct: 118 AYAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQRCAPKLKVRQVAAGGTHSVVLTQDGH 177
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ +GQ +I P+R+ GL+ V I+ G H+ A+T DG L+ WG N
Sbjct: 178 VWT-----WGQPWPPGDIKQISTPVRVQGLEN-VKVIAVGAFHNLALTEDGILWAWGNNE 231
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
GQLG G + PI +VE LS + A G S A+T G+V +WG G GRLG
Sbjct: 232 YGQLGTGDTQPRSQPI--RVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGF 289
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G + S S P+ ++ L G + + G HS + +GR++ +G
Sbjct: 290 GDDKS--------SHMVPQKVELLAGEDIIQVSCGGTHSVALTRDGRMFSYG-------- 333
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS--ESPVDQVSCG 329
G+H R L G ++ T E + + P G S + V+CG
Sbjct: 334 --RGDHGR---LGYGRKVTTGHPME--------VPIDLPPPGTSGGDSGGQWQARYVACG 380
Query: 330 WKHTAAIS 337
+HT AI+
Sbjct: 381 GRHTLAIA 388
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 115/299 (38%), Gaps = 62/299 (20%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
A ++ + WG +GQLG+G + V L + G S+A+
Sbjct: 4 PPAFSLPTAVLAWGSGEDGQLGMGGYEEE--DWARGVAALDALAVSAVVAGSRNSLAICA 61
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G++ +WG G LGH E+ +E +P + L GV + AA G H +D
Sbjct: 62 DGRLFTWGWNQRGTLGHPPETK--------TESSPAPVDALAGVSIVQAAIGGWHCLAVD 113
Query: 255 ENGRVYIFG----------------------------DRAVDKMLFQE----GNHARRPS 282
+ GR Y +G R K+ ++ G H+
Sbjct: 114 DKGRAYAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQRCAPKLKVRQVAAGGTHSV--V 171
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKIL 342
L G ++TWG G I + +P RVQG + V ++ G H A++E IL
Sbjct: 172 LTQDGHVWTWGQP----WPPGDIKQISTPVRVQGLEN---VKVIAVGAFHNLALTEDGIL 224
Query: 343 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
W W G++ GQLG G+ P V ++ + ++ G H+ AL +
Sbjct: 225 -WAW----------GNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTK 272
>gi|296189284|ref|XP_002742715.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Callithrix jacchus]
Length = 577
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 113/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 149 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 208
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++G K VV I+ G A+ GE+Y+WG N NGQLGLG
Sbjct: 209 QVGSGSTVNQP-TPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGN 267
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 268 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 319
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y + E + + ++IAA H SA + G VY++G
Sbjct: 320 --KSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 361
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 113/226 (50%), Gaps = 16/226 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
+ G G LGLG ++S P + + L+ G G H + T G V+ G N +
Sbjct: 95 VLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAY 154
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG + + L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G
Sbjct: 155 SQLG-NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSG 213
Query: 159 KKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ P P +V CL A G +AV G+V WG G+G+LG G
Sbjct: 214 STVNQ--PTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGN---- 267
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S ++ TP + L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 268 -----SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 308
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 147/347 (42%), Gaps = 60/347 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 56 KWPIFSLCSEEELQLIRQACVFGGAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 114
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 115 PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 174
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ TPR +
Sbjct: 175 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPTPRRV 224
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW 292
+ C+ V I A +M +++ GE+Y W
Sbjct: 225 -----------------TGCLQNKVVVTI----ACGQMCCM--------AVVDSGEVYVW 255
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 351
G N NG LG+G+ +P RV V +V+CG+ HT ++ EG++ WG
Sbjct: 256 GYNGNGQLGLGNSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWG------ 308
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 309 ------ANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA 349
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 111/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ LSG K A L + V T
Sbjct: 88 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIACLSYGSGPHIVLATTE 143
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 144 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSL---- 191
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS +P RV
Sbjct: 192 --------------------------VLTSDGEVFAWGYNNSGQVGSGSTVNQPTPRRVT 225
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG A+ + G++ WG+ G+ GQLG GN +
Sbjct: 226 GCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGN------------GQLGLGNSGNQPT 273
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 274 PCRVAALQGIRVQRVACGYAHTLVLTD 300
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 254 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 313
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 314 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 366
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 367 --SVILPHLTHFSCTDDVF 383
>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
Length = 4220
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 130/253 (51%), Gaps = 23/253 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + P + F+ ++ ++CG +H+ + +G +Y GL ++G+
Sbjct: 2533 WGEGEDGKLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAILSSGELYTWGLGEYGR 2592
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N + L+P ++ V+ I+ G + A+T DG ++ WG G+LG G
Sbjct: 2593 LGHGDNYTH-LKPKKVQSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGDFGKLGRGG 2651
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+P P VE L G + A G + S+A++ G V +WG G RLGHG ++ +
Sbjct: 2652 SEGCSVPNP--VEKLQGQGVCKVACGAQFSLALSTSGLVWTWGKGDYYRLGHGNDTHV-- 2707
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P+++ L G K+ A G LH + ++G+V+ +GD Q+GN+
Sbjct: 2708 -------RKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDHG----QQGNNTT 2756
Query: 279 ---RRPSLISGGE 288
RRP L++G E
Sbjct: 2757 TVNRRPQLVNGLE 2769
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 135/306 (44%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ S RP V A + ++CGG+H+ +T+ +Y G +G+
Sbjct: 3465 WGEGDDGKLGHGNRNSCDRPRVIEALRGKGVIDISCGGSHSACITQNHELYTWGKGRYGR 3524
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L+ V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 3525 LGHGDSED-QLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRG- 3582
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ IP KVE L G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 3583 -GSDGCKIPMKVESLIGLGVSKVECGSQFSVALTRSGAVYTWGKGDYYRLGHGVDDHV-- 3639
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ + L+G KV A G LH + G VY
Sbjct: 3640 -------RRPKRVAALQGKKVITIATGSLHCVASTDTGEVY------------------- 3673
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
TWG N+ G LG G+ + + P R+ + +V+CG HT A S
Sbjct: 3674 -----------TWGDNDEGQLGDGTTNAIARP-RLVTALQGKKISRVACGSAHTIAWSTC 3721
Query: 340 KILTWG 345
K + G
Sbjct: 3722 KPVNAG 3727
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD G+LG G R P + + + ++CG H+ +T G +Y G ++G+
Sbjct: 41 WGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISCGSTHSAAVTSEGELYTWGRGNYGR 100
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGL 157
L G SE+ L P+ +SGL+ ++ ++ +G H+ A DG ++ WG G+LG
Sbjct: 101 LGHGSSED---QLVPVLVSGLRGHHIIDVACGSGDAHTLAAADDGTVWSWGDGDYGKLGR 157
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P +E L G+ + G + S+A+T G V +WG G RLGHG E +
Sbjct: 158 G--GSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTRDGSVWTWGKGEGFRLGHGTEDHV 215
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
P+L++ L+G V + G +H C+
Sbjct: 216 ---------RHPKLVEALDGKHVVDVSVGSIH--CL------------------------ 240
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
+L GE+Y WG N+ G LG + P V G S+ V ++CG + A S
Sbjct: 241 ----ALTDAGEVYCWGRNDQGQLGDIDCQIRPEPTLVSGLASKGIVG-IACGPAQSFAWS 295
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 169/389 (43%), Gaps = 54/389 (13%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
+WG D +LG G S+ + V S F GG+ TLF ++ G V+A G +
Sbjct: 2425 VWGLNDKDQLG-GLKGSKIKVPVLSEFIGALKVQQIAGGSKTLFAVSHDGKVFACGESTN 2483
Query: 101 GQLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ S N+ + +S V + +G H+ A+T++G+L+ WG+ +G+LG
Sbjct: 2484 GRLGLGPLSANVTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFSWGEGEDGKLGH 2543
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P ++ + + G S A+ G++ +WG G GRLGHG +
Sbjct: 2544 GNRMN--CDHPKLIDTFKSSCVRDMSCGSSHSAAILSSGELYTWGLGEYGRLGHGDNYTH 2601
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLF--Q 273
L P+ ++ +V A G + + ++G V+ +GD K+
Sbjct: 2602 L---------KPKKVQSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGDFGKLGRGGS 2652
Query: 274 EGNHARRP--------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
EG P +L + G ++TWG + LG G+ + P+
Sbjct: 2653 EGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGLVWTWGKGDYYRLGHGNDTHVRKPQI 2712
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V G + VD V+ G H A+++ G++ WG ++ H GQ G+
Sbjct: 2713 VDGLRGKKIVD-VAVGALHCLAVTDSGQVFAWG---------DNDH---GQQGNNTTTVN 2759
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGALLE 401
P +VN E K +V+CG +H+ A E
Sbjct: 2760 RRPQLVNGLEGQKITRVACGSSHSIAWAE 2788
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG SLE + + S++ + GG TLF +T G VYATG
Sbjct: 3359 WGHNHRGQLG--SLEGAKVKLPQTIEALASIRPVQIVGGEQTLFAVTAEGKVYATGYGHG 3416
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ + LE L+ ++K V + +G H+ A++ DG++Y WG+ +G+LG
Sbjct: 3417 GRLGLGGTDTVTSIKMLESLQHVVVRK--VAVHSGGKHAMALSADGDVYSWGEGDDGKLG 3474
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + + P +E L G + G S +T ++ +WG G GRLGHG
Sbjct: 3475 HGNRNS--CDRPRVIEALRGKGVIDISCGGSHSACITQNHELYTWGKGRYGRLGHGD--- 3529
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P++++ L G +V A +G + C+ ++ V+ +GD K+
Sbjct: 3530 ------SEDQLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGG 3583
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG G D + P+
Sbjct: 3584 SDGCKIPMKVESLIGLGVSKVECGSQFSVALTRSGAVYTWGKGDYYRLGHGVDDHVRRPK 3643
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
RV V ++ G H A ++ G++ TW G + GQLG G
Sbjct: 3644 RVAA-LQGKKVITIATGSLHCVASTDTGEVYTW------------GDNDEGQLGDGTTNA 3690
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 3691 IARPRLVTALQGKKISRVACGSAHTIA 3717
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 122/286 (42%), Gaps = 61/286 (21%)
Query: 122 KKEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
K E+VQ+ T H A+T +GE+Y WG G+LG G + + PT V L+G
Sbjct: 14 KCEIVQVVTHTDGKHFLALTREGEVYSWGSGDGGKLGHGDTSPR--EEPTLVTGLAGKQV 71
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
+ + G S AVT G++ +WG G GRLGHG S + P L+ L G
Sbjct: 72 IRISCGSTHSAAVTSEGELYTWGRGNYGRLGHGS---------SEDQLVPVLVSGLRGHH 122
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ A G +G + A D G +++WG + G
Sbjct: 123 IIDVACG---------SGDAHTLA--AADD-----------------GTVWSWGDGDYGK 154
Query: 300 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSE 355
LG G D +P ER+QG V +V CG + + A++ +G + TWG G
Sbjct: 155 LGRGGSDGCKNPKSIERLQG----LGVCKVYCGAQFSLALTRDGSVWTWGKG-------- 202
Query: 356 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G +LGHG + HP +V + + VS G H AL +
Sbjct: 203 ----EGFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTD 244
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 116/258 (44%), Gaps = 52/258 (20%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
++++WG N QLG G K +K I +P E + + +Q A G + AV+ GKV + G
Sbjct: 2422 KVFVWGLNDKDQLG-GLKGSK-IKVPVLSEFIGALKVQQIAGGSKTLFAVSHDGKVFACG 2479
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+GRLG LG L S + PR I+ L V+ + +HS
Sbjct: 2480 ESTNGRLG-------LGPL-SANVTVPRQIENLSSFMVRKVS---VHSG----------- 2517
Query: 263 GDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
G HA +L G+L++WG E+G LG G+ P+ + F S
Sbjct: 2518 ------------GRHAM--ALTIEGKLFSWGEGEDGKLGHGNRMNCDHPKLIDT-FKSSC 2562
Query: 323 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
V +SCG H+AAI S G++ TWG G G+LGHG++ ++ P V
Sbjct: 2563 VRDMSCGSSHSAAILSSGELYTWGLG------------EYGRLGHGDNYTHLKPKKVQSF 2610
Query: 382 ENVKALQVSCGFNHTGAL 399
+ + + ++CG L
Sbjct: 2611 TSHRVIDIACGSRDAQTL 2628
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 114/252 (45%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG + AKV +P +E L+ I Q G + AVT GKV +
Sbjct: 3354 GTIYGWGHNHRGQLG-SLEGAKV-KLPQTIEALASIRPVQIVGGEQTLFAVTAEGKVYAT 3411
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G ++ ++++ L+ V V+ A +HS
Sbjct: 3412 GYGHGGRLGLGGTDTVTSI---------KMLESLQHVVVRKVA---VHSG---------- 3449
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
G HA +L + G++Y+WG ++G LG G+ + P ++ +
Sbjct: 3450 -------------GKHAM--ALSADGDVYSWGEGDDGKLGHGNRNSCDRPRVIEALRGKG 3494
Query: 322 PVDQVSCGWKHTAAISEG-KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
+D +SCG H+A I++ ++ TWG G G+LGHG+ D + P +V
Sbjct: 3495 VID-ISCGGSHSACITQNHELYTWGKG------------RYGRLGHGDSEDQLLPKVVEA 3541
Query: 381 GENVKALQVSCG 392
+ + V+CG
Sbjct: 3542 LRGNRVIDVACG 3553
>gi|113205375|gb|AAU93591.2| Zinc finger protein, putative [Solanum demissum]
Length = 1127
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 162/366 (44%), Gaps = 63/366 (17%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
++ ++CG H + +T+ G ++ G G+LG S P I K V+ I+ G
Sbjct: 310 VQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVS-HPKLIKNFKGMNVELIACG 368
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC--LSGIFTKQAALGFEQS 189
+HS A+T G+LY WG + LG ++ IP KV C + G+ + G +
Sbjct: 369 EYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKV-CGLMEGLRVSHVSCGPWHT 427
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+T G++ ++G G G LGHG S + TPR ++ G+K A G H
Sbjct: 428 ALITSAGRLFTFGDGTFGALGHGDRSGCI---------TPREVETFNGLKTLKVACGVWH 478
Query: 250 SACIDE-------------NGRVYIFGD---------------------RAVDKMLFQEG 275
+A + E +G ++ +GD VDK +
Sbjct: 479 TAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITALVDKSFSEVA 538
Query: 276 -NHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
++A +L + G +YT GSN G LG + + SP V+ +S V+++SCG H A
Sbjct: 539 CSYAMTVALTTTGRVYTMGSNVYGQLGCPLANGM-SPICVEDYLVDSTVEEISCGSHHVA 597
Query: 335 AI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 393
+ S ++ TWG G GQLGHG+ + PT+V+ + + ++ CG
Sbjct: 598 VLTSRTEVYTWGKG------------ENGQLGHGDCENKCTPTLVDILRDKQVKRIVCGS 645
Query: 394 NHTGAL 399
N + A+
Sbjct: 646 NFSAAI 651
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 75/152 (49%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD G+LG G + R P +A S +AC A T+ LT TG VY G N +GQ
Sbjct: 504 WGDGDKGKLGHGDNKPRLAPQCITALVDKSFSEVACSYAMTVALTTTGRVYTMGSNVYGQ 563
Query: 103 LGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + P+ + + V +IS G HH + +T E+Y WGK NGQLG G
Sbjct: 564 LGCP--LANGMSPICVEDYLVDSTVEEISCGSHHVAVLTSRTEVYTWGKGENGQLGHGDC 621
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
K PT V+ L K+ G S A+
Sbjct: 622 ENKC--TPTLVDILRDKQVKRIVCGSNFSAAI 651
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 103/239 (43%), Gaps = 54/239 (22%)
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P +E + + + G ++ VT G+ SWG GRLGHG E+ +
Sbjct: 299 PKSLESSVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDV---------S 349
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
P+LIK +G+ V++ A G HS + S G
Sbjct: 350 HPKLIKNFKGMNVELIACGEYHSCAV------------------------------TSSG 379
Query: 288 ELYTW--GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTW 344
+LYTW G+ +G LG S P++V G V VSCG HTA I S G++ T+
Sbjct: 380 DLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGPWHTALITSAGRLFTF 439
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
G GTF G LGHG+ I P V +K L+V+CG HT A++E +
Sbjct: 440 G----DGTF--------GALGHGDRSGCITPREVETFNGLKTLKVACGVWHTAAVVELM 486
>gi|145334779|ref|NP_001078735.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|8978337|dbj|BAA98190.1| regulator of chromosome condensation (cell cycle regulatory
protein) like [Arabidopsis thaliana]
gi|332008270|gb|AED95653.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 454
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 195/442 (44%), Gaps = 85/442 (19%)
Query: 25 GICKRWISSTL-QRRFAALWGNGDYGRLGLGSLE------SRWRPVVCSAFEKHSLKALA 77
G+ +R +ST +RR +G+G+ G LGL S + P V S + +++
Sbjct: 30 GVVRRQFTSTSGERRTVMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPS-DISSIS 88
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ--ISTGYH 133
G H+L +T +G ++A G ND GQLG + ++ EP R+ GL+ VQ ++G
Sbjct: 89 AGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSRDSRSEPKRVEGLENVNVQAAFASGVV 148
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
S+AI DG L++WG++ GQLGLG + +P++VE L+ + +LG+ ++A+T
Sbjct: 149 -SAAIGDDGSLWVWGRSKRGQLGLGNGIIEA-RVPSRVENLAAEHVVKVSLGWGHALALT 206
Query: 194 GGGKVLSWGAGGSGRLGH---GQESSILGFLRSTS------------------------- 225
GKV WG GR+G+ E+S+L + S
Sbjct: 207 VDGKVFGWGYVADGRVGNVGLPLEASLLDSITDGSMKGHHAAGDLNLEAAEKKVVEAMSK 266
Query: 226 ------EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY-----IFGD--RAVDKMLF 272
+ P L++E KV A G HS + +G + I+G R+ +
Sbjct: 267 ENDMPIAWEPCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGM 326
Query: 273 QEGNHARRPSLISGG-------------ELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
+ + P I+ G + +WG N + LG G + L P V+G
Sbjct: 327 KPVDITESPISIAAGLGHSLAICNRGERNILSWGWNRSRQLGRGKPENL--PREVEGFDG 384
Query: 320 ESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
ESP VS G H+ ++E G+ WG G G+LG G+ D P ++
Sbjct: 385 ESPA-SVSAGRVHSLCVTEKGEAWVWGCG------------KNGRLGLGSSSDEPEPMLL 431
Query: 379 NFGENVKALQVSCGFNHTGALL 400
E LQ GF+H+ L+
Sbjct: 432 EDVEGC-VLQAVAGFDHSLILV 452
>gi|224138854|ref|XP_002322918.1| predicted protein [Populus trichocarpa]
gi|222867548|gb|EEF04679.1| predicted protein [Populus trichocarpa]
Length = 467
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 143/342 (41%), Gaps = 80/342 (23%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P + S + ++A GG HTL L++TG V+ G GQLG+ + P I
Sbjct: 199 PAIVSLGPGVRITSVAAGGRHTLALSDTGQVWGWGYGGEGQLGLGSRVKMVSSPHLIPFT 258
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+ Q +TG H SS + NG L P +V G + K+
Sbjct: 259 E----QPTTGKHRSSVV------------HNGSTNL----------PAQVSNFPGSYVKE 292
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
A G S VT G +L++G G G+ GHG + + P + L G++++
Sbjct: 293 IACGGRHSAVVTDAGTLLTFGWGLYGQCGHGS---------TNDQLRPTSLPSLSGIQIE 343
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLG 301
AAG H+ CI +GRVY+F G N+ G LG
Sbjct: 344 RIAAGLWHTMCITIDGRVYVF------------------------------GGNQFGQLG 373
Query: 302 IGSIDVLHSPERVQGPFSESP-VDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHS 359
G+ P ++ P ES V VSCG +H+A + E G++ +WGW +
Sbjct: 374 TGASQGETLPRLLEDPCLESKLVKMVSCGARHSAILLEDGQVFSWGW------------N 421
Query: 360 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GQLG G+ +D PT V E + V+CG+ HT L E
Sbjct: 422 KYGQLGVGDSIDRNTPTQVPI-EGCRPKMVACGWWHTLLLAE 462
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 5/145 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G G YG+ G GS + RP + ++ +A G HT+ +T G VY G N FGQL
Sbjct: 313 GWGLYGQCGHGSTNDQLRPTSLPSLSGIQIERIAAGLWHTMCITIDGRVYVFGGNQFGQL 372
Query: 104 GISENIGYSLEP-LRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G + G +L L L+ ++V+ +S G HS+ + DG+++ WG N GQLG+G
Sbjct: 373 GTGASQGETLPRLLEDPCLESKLVKMVSCGARHSAILLEDGQVFSWGWNKYGQLGVGDSI 432
Query: 162 AKVIPIPTKVECLSGIFTKQAALGF 186
+ P +E G K A G+
Sbjct: 433 DRNTPTQVPIE---GCRPKMVACGW 454
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 18/171 (10%)
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISG 286
TP ++ GV++ AAG H+ + + G+V+ +G ++ L P LI
Sbjct: 198 TPAIVSLGPGVRITSVAAGGRHTLALSDTGQVWGWGYGGEGQLGLGSRVKMVSSPHLIPF 257
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 345
E T G + + + GS ++ P +V F S V +++CG +H+A +++ G +LT+G
Sbjct: 258 TEQPTTGKHRSSVVHNGSTNL---PAQVSN-FPGSYVKEIACGGRHSAVVTDAGTLLTFG 313
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
WG GQ GHG+ D + PT + ++ +++ G HT
Sbjct: 314 WGLY------------GQCGHGSTNDQLRPTSLPSLSGIQIERIAAGLWHT 352
>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
Length = 1058
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 161/365 (44%), Gaps = 54/365 (14%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+LGLG +E P +++ +ACG HTLFLT G VYA G ND
Sbjct: 10 WGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACGSNDH 69
Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + + PL I L+ V +QIS G HS A++ G++ WG N GQLG
Sbjct: 70 SQLG---HDLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHAT 126
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+++ +P V L Q A G S+A+T G++ SWG+ G+LG +
Sbjct: 127 D-KEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDL-- 183
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHA 278
T P + L G+ + A G HS I ++G V+ +G ++ L E N A
Sbjct: 184 ----THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRA 239
Query: 279 RRPSLIS-----------GGELYTWGSNENGCL------------GIGSIDVLHSPERVQ 315
L + G E + +NE G G S ++L R+
Sbjct: 240 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEML---PRMV 296
Query: 316 GPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
S + QV+CG +HT A+ S G++ +G G S GQLG + +
Sbjct: 297 MELMGSTITQVACGNRHTLALVPSRGRVYAFGLG------------SSGQLGTRSTKSLM 344
Query: 374 HPTIV 378
P +V
Sbjct: 345 LPQVV 349
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 131/299 (43%), Gaps = 36/299 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ D+ +LG L ++ RP++ + + + ++CG H+L L++ G V + G ND GQL
Sbjct: 65 GSNDHSQLG-HDLPTK-RPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQL 122
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG-KKA 161
G + + P + L K VVQI+ G +HS A+T GELY WG N GQLG+ K
Sbjct: 123 GHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKD 182
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P ++ L GI A G S ++ G V WG G+LG E
Sbjct: 183 LTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDE------- 235
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRAVD 268
T+ P +K L + V+ A G S + G V+ G + +
Sbjct: 236 --TNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 293
Query: 269 KMLFQE----------GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
+M+ + GN + S G +Y +G +G LG S L P+ V GP
Sbjct: 294 RMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIGP 352
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 121/276 (43%), Gaps = 49/276 (17%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P+++ +Q A G ++ +T GKV + G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACG 65
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ +LGH + P LI EL+ + + G HS + + G+V +
Sbjct: 66 SNDHSQLGHDLPTK-----------RPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSW 114
Query: 263 GDR-------AVDKMLFQEGNHARR----------------PSLISGGELYTWGSNENGC 299
GD A DK + Q R+ +L S GELY+WGSN G
Sbjct: 115 GDNDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQ 174
Query: 300 LGIGSI-DVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 356
LG+ S D+ H P R+ P+ ++CG H+ IS+ + +GW
Sbjct: 175 LGVNSPKDLTHCNYPLRLTTLLG-IPLAAIACGGNHSFLISKSGAV-FGW---------- 222
Query: 357 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
G ++ GQLG ++ + +PT + + V+CG
Sbjct: 223 GRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACG 258
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 16/119 (13%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS-ESPVDQVSCGWKHTAAIS-EGK 340
+ SG ELY WGS +G LG+G I+ Q P++ ++ V+QV+CG +HT ++ GK
Sbjct: 1 MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGK 60
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ G + HS QLGH D+ P ++ ++ +Q+SCG H+ AL
Sbjct: 61 VYACG---------SNDHS---QLGH--DLPTKRPLLIPELQDYVIIQISCGSRHSLAL 105
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 82/210 (39%), Gaps = 54/210 (25%)
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+ G ++ WG+ G+LG LG + TP I V+ A G H+
Sbjct: 1 MASGKELYCWGSTSHGQLG-------LGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTL 53
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSP 311
+ NG+VY G D +RP LI + Y
Sbjct: 54 FLTANGKVYACGSN--DHSQLGHDLPTKRPLLIPELQDYV-------------------- 91
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+ Q+SCG +H+ A+S+ G++L+WG + GQLGH D
Sbjct: 92 -----------IIQISCGSRHSLALSDWGQVLSWG------------DNDCGQLGHATDK 128
Query: 371 DYIH-PTIVNFGENVKALQVSCGFNHTGAL 399
+ + P +V + +Q++CG NH+ AL
Sbjct: 129 EIMQLPKVVRQLVSKTVVQIACGNNHSLAL 158
>gi|444916978|ref|ZP_21237086.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444711624|gb|ELW52563.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 734
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 169/388 (43%), Gaps = 79/388 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G+ R PV + L+ G HT+ L G V+A G N +GQ
Sbjct: 210 WGDNRYGQLGDGTTTQRAVPV--QVLNLSGVMNLSAGSFHTVALRSDGSVWAWGFNAYGQ 267
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG +P+++ GL +V+ + G +HS A+ DG ++ WG N QLG G +
Sbjct: 268 LGDGTTTS-RFQPVQV-GL-SDVLTLVAGNYHSLAVRSDGAVWAWGDNRYRQLGDGTTTS 324
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+P+ + LSG T A G++ S+ + G V SWG G+LG G
Sbjct: 325 SRVPVQSG---LSGGVTLVA--GYKHSLVLRSDGTVWSWGDNVFGQLGDG---------- 369
Query: 223 STSEYTPRLIKELEGVKVKI-------AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ PR VKV ++G LHS +D NG V+ +GD ++ G
Sbjct: 370 ---TFNPR----SSAVKVSWLSLGRADVSSGQLHSVVLDSNGAVWAWGDNYSGQL----G 418
Query: 276 NHARRPSLIS-----GGE------------------LYTWGSNENGCLGIGSIDVLHSPE 312
N SL++ GG ++ WG NE+G LG G++ P
Sbjct: 419 NGTGLDSLVAAPVGLGGSVAVSAGFKHTLVLKADTTVWAWGVNEHGQLGDGTLTDRTRPV 478
Query: 313 RVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+V G S V VS G H+ A+ S G + W G + GQLG G + D
Sbjct: 479 QVAG---LSGVSAVSAGSYHSLALRSNGTVWAW------------GFNRYGQLGDGTNTD 523
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ P V V A V+ G +H+ AL
Sbjct: 524 RLQPVQVAGLSGVVA--VAAGDSHSLAL 549
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 168/376 (44%), Gaps = 61/376 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ + PV + +L G +H L L G V+A G N + Q
Sbjct: 110 WGDNTAGQLGNGTASAS--PVPVRVQNLSGVVSLGSGFSHGLALRSDGTVWAWGDNRYNQ 167
Query: 103 LGISENIGYSLE--PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG N+G + P+++ GL + ++ GY +S A+ DG ++ WG N GQLG G
Sbjct: 168 LG---NVGATRSNLPVQVPGLSGVIAVVAGGY-YSLALRSDGTVWAWGDNRYGQLGDGTT 223
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P+ +V LSG+ A G +VA+ G V +WG G+LG G
Sbjct: 224 TQRAVPV--QVLNLSGVMNLSA--GSFHTVALRSDGSVWAWGFNAYGQLGDGT------- 272
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+TS + P + + V AG HS + +G V+ +GD ++ +R
Sbjct: 273 --TTSRFQPVQVGLSD---VLTLVAGNYHSLAVRSDGAVWAWGDNRYRQLGDGTTTSSRV 327
Query: 281 P---------SLISG----------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
P +L++G G +++WG N G LG G+ + S +V S
Sbjct: 328 PVQSGLSGGVTLVAGYKHSLVLRSDGTVWSWGDNVFGQLGDGTFNPRSSAVKVS-WLSLG 386
Query: 322 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
D VS G H+ + S G + WG D +S GQLG+G +D + V
Sbjct: 387 RAD-VSSGQLHSVVLDSNGAVWAWG----------DNYS--GQLGNGTGLDSLVAAPVGL 433
Query: 381 GENVKALQVSCGFNHT 396
G +V VS GF HT
Sbjct: 434 GGSVA---VSAGFKHT 446
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 151/337 (44%), Gaps = 64/337 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG ++G+LG G+L R RPV + + A++ G H+L L G V+A G N +GQ
Sbjct: 458 WGVNEHGQLGDGTLTDRTRPVQVAGLS--GVSAVSAGSYHSLALRSNGTVWAWGFNRYGQ 515
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG N L+P++++GL VV ++ G HS A+ DG ++ WG N +GQ+G G +
Sbjct: 516 LGDGTNTD-RLQPVQVAGLSG-VVAVAAGDSHSLALRSDGTVWAWGYNFDGQIGDGSYSW 573
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P V+ + + G S+A+ G V +WG GSG+LG G +
Sbjct: 574 RFLP----VQVVGLSGVVSVSAGGYHSLALRSDGTVWTWGYNGSGQLGDGSTA------- 622
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
++ P + L GV V + + + HS + +G V+
Sbjct: 623 -INKPAPVQVAGLSGV-VSLGSGNY-HSLGLRSDGTVW---------------------- 657
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKI 341
WG N +G LG GS+ +P RV G S V V G H+ A S+G +
Sbjct: 658 --------AWGFNFDGQLGDGSLLNRSTPVRVSG---LSGVVSVVAGDYHSLARRSDGTV 706
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
WG+ G GQLG G D + P V
Sbjct: 707 WAWGYNGE------------GQLGDGTRNDTLVPVWV 731
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 136/297 (45%), Gaps = 42/297 (14%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
+ S LA G H++ + G V+A G N GQLG + S P+R++ L VV ++
Sbjct: 35 RSSAARLALGQYHSVGVHSDGTVWAWGFNRQGQLGDGTLVD-SPTPVRVTNLSG-VVSVA 92
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
+G +HS ++ DG ++ WG N+ GQLG G +A P+P +V+ LSG+ + + GF
Sbjct: 93 SGDYHSLGLSSDGTVWAWGDNTAGQLGNGTASAS--PVPVRVQNLSGVVSLGS--GFSHG 148
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A+ G V +WG + LG + +T P + L GV + + A G+ +
Sbjct: 149 LALRSDGTVWAWGD---------NRYNQLGNVGATRSNLPVQVPGLSGV-IAVVAGGY-Y 197
Query: 250 SACIDENGRVYIFGD-------------RAVDKMLFQ-------EGNHARRPSLISGGEL 289
S + +G V+ +GD RAV + +L S G +
Sbjct: 198 SLALRSDGTVWAWGDNRYGQLGDGTTTQRAVPVQVLNLSGVMNLSAGSFHTVALRSDGSV 257
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 345
+ WG N G LG G+ P +V S V + G H+ A+ S+G + WG
Sbjct: 258 WAWGFNAYGQLGDGTTTSRFQPVQV----GLSDVLTLVAGNYHSLAVRSDGAVWAWG 310
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 123/295 (41%), Gaps = 54/295 (18%)
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
+G PL G + +++ G +HS + DG ++ WG N GQLG G P P
Sbjct: 25 LGRVRSPL---GGRSSAARLALGQYHSVGVHSDGTVWAWGFNRQGQLGDGTLVDS--PTP 79
Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
+V LSG+ + A G S+ ++ G V +WG +G+LG+G S +
Sbjct: 80 VRVTNLSGVVS--VASGDYHSLGLSSDGTVWAWGDNTAGQLGNGTAS---------ASPV 128
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP------- 281
P ++ L GV V + +GF H + +G V+ +GD +++ + P
Sbjct: 129 PVRVQNLSGV-VSL-GSGFSHGLALRSDGTVWAWGDNRYNQLGNVGATRSNLPVQVPGLS 186
Query: 282 -------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 328
+L S G ++ WG N G LG G+ P +V + S V +S
Sbjct: 187 GVIAVVAGGYYSLALRSDGTVWAWGDNRYGQLGDGTTTQRAVPVQV---LNLSGVMNLSA 243
Query: 329 GWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 382
G HT A+ S+G + W G ++ GQLG G P V +
Sbjct: 244 GSFHTVALRSDGSVWAW------------GFNAYGQLGDGTTTSRFQPVQVGLSD 286
>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1070
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 151/340 (44%), Gaps = 58/340 (17%)
Query: 92 VYATGLNDFGQLGIS---ENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMW 147
V++ G GQLGIS +++ P + L K++ +IS G H+ + DG + M
Sbjct: 3 VFSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVMMC 62
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G N GQLG + +++ +P + Q + G + ++AVT G+VL WG G
Sbjct: 63 GANDRGQLGQDRPGSELAHVPAT----ETLVITQVSCGNDHTLAVTDRGQVLGWGRNDRG 118
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR-- 265
+ G L S + PR +K L +V A G +HS + +GR++ +GD
Sbjct: 119 QCG-------LSTGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRIFAWGDNSF 171
Query: 266 ------AVDKMLFQEGNHARRPSLISG-------------------GELYTWGSNENGCL 300
A + L++ +H ++ S + G G ++ WG N G L
Sbjct: 172 GQLGIGAPGRTLYR--DHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQL 229
Query: 301 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHS 359
G+G+ + SP ++ V ++CG +TA ++ G + +G G
Sbjct: 230 GLGTTEDRVSPTPLKN-LKTKQVKYIACGQNYTAILTASGGLFLFGQG------------ 276
Query: 360 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
S GQLGHG+ + ++P V + QV+CG HT L
Sbjct: 277 SEGQLGHGSHSNEVNPRSVQGFLGSEITQVACGRQHTLVL 316
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 165/376 (43%), Gaps = 48/376 (12%)
Query: 37 RRFAALWGNGDYGRLGLGS---LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
R FA WG+ +G+LG+G+ R P S+ ++ LACGG H+ L+ +G V+
Sbjct: 162 RIFA--WGDNSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVF 219
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN 152
G N+ GQLG+ + P + LK K+V I+ G ++++ +T G L+++G+ S
Sbjct: 220 GWGKNNCGQLGLG-TTEDRVSPTPLKNLKTKQVKYIACGQNYTAILTASGGLFLFGQGSE 278
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG-GGKVLSWGAGGSGRLGH 211
GQLG G + +V P V+ G Q A G + ++ + G G+ S G G G+LG
Sbjct: 279 GQLGHGSHSNEVNP--RSVQGFLGSEITQVACGRQHTLVLEGRTGRFFSLGQGSKGQLGL 336
Query: 212 GQESSILGFLRSTSEYTP---RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
+SS +S + P EG + + G ++ GD++
Sbjct: 337 DNDSS-----KSCASPVPGPWEAPSSTEGCSNGEESRSII--------GSIFAGGDQSF- 382
Query: 269 KMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSID-VLHSPERVQGPFSESPVDQVS 327
+ GN P I SI+ V+ + + +Q SP+ + S
Sbjct: 383 -CIVSRGNDPDHPLDFRE--------------AIPSIEPVVLTKDLLQEVSESSPLLEPS 427
Query: 328 CGWKH-TAAISEGKILTWGW---GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 383
+ A+S L + GS G F G S GQLGHG+ + ++P V
Sbjct: 428 KAVQTLEMALSSPACLNASFLVGAGSGGLFLF-GQGSEGQLGHGSHSNEVNPRSVKDFLG 486
Query: 384 VKALQVSCGFNHTGAL 399
+ QV+CG HT L
Sbjct: 487 NEITQVACGRQHTLVL 502
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 150/364 (41%), Gaps = 65/364 (17%)
Query: 27 CKRWISSTLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF 85
C W S L A WG + G+LGLG+ E R P + +K +ACG +T
Sbjct: 204 CGGWHSFALSVSGAVFGWGKNNCGQLGLGTTEDRVSPTPLKNLKTKQVKYIACGQNYTAI 263
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAIT-VDGE 143
LT +G ++ G GQLG + + P + G L E+ Q++ G H+ + G
Sbjct: 264 LTASGGLFLFGQGSEGQLGHGSH-SNEVNPRSVQGFLGSEITQVACGRQHTLVLEGRTGR 322
Query: 144 LYMWGKNSNGQLGLGKKAAKVI--PIPTKVECLSGIFTKQAALGFEQSVAVTG----GGK 197
+ G+ S GQLGL ++K P+P E S + + E+S ++ G GG
Sbjct: 323 FFSLGQGSKGQLGLDNDSSKSCASPVPGPWEAPS---STEGCSNGEESRSIIGSIFAGGD 379
Query: 198 ----VLSWGAGGSGRLGHGQ-----ESSIL--GFLRSTSEYTPRL--IKELEGVKVKIAA 244
++S G L + E +L L+ SE +P L K ++ +++ +++
Sbjct: 380 QSFCIVSRGNDPDHPLDFREAIPSIEPVVLTKDLLQEVSESSPLLEPSKAVQTLEMALSS 439
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGS 304
L+++ + G SGG L+ +G G LG GS
Sbjct: 440 PACLNASFLVGAG---------------------------SGG-LFLFGQGSEGQLGHGS 471
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL 364
+P V+ F + + QV+CG +HT + G G F G S GQL
Sbjct: 472 HSNEVNPRSVKD-FLGNEITQVACGRQHTLVLE----------GRTGGFYSLGQGSKGQL 520
Query: 365 GHGN 368
G N
Sbjct: 521 GLDN 524
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 103/276 (37%), Gaps = 42/276 (15%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLT-ETGCVYATGLNDF 100
L+G G G+LG GS + P F + +ACG HTL L TG ++ G
Sbjct: 272 LFGQGSEGQLGHGSHSNEVNPRSVQGFLGSEITQVACGRQHTLVLEGRTGRFFSLGQGSK 331
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS--------- 151
GQLG+ + S + G + + + ++ G ++ G S
Sbjct: 332 GQLGLDNDSSKSCAS-PVPGPWEAPSSTEGCSNGEESRSIIGSIFAGGDQSFCIVSRGND 390
Query: 152 -NGQLGLGKKAAKVIPI------------------PTK-VECLSGIFTKQAALGFEQSVA 191
+ L + + P+ P+K V+ L + A L V
Sbjct: 391 PDHPLDFREAIPSIEPVVLTKDLLQEVSESSPLLEPSKAVQTLEMALSSPACLNASFLVG 450
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
GG L +G G G+LGHG S +E PR +K+ G ++ A G H+
Sbjct: 451 AGSGGLFL-FGQGSEGQLGHGSHS---------NEVNPRSVKDFLGNEITQVACGRQHTL 500
Query: 252 CID-ENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
++ G Y G + ++ G+ SL+ G
Sbjct: 501 VLEGRTGGFYSLGQGSKGQLGLDNGSSKSCASLVPG 536
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 20/118 (16%)
Query: 289 LYTWGSNENGCLGIG----SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILT 343
+++WG ++G LGI + L SP V + + ++SCG +HT + +G ++
Sbjct: 3 VFSWGCTQDGQLGISGLGDDVPSLSSPREVPA-LAGKQIREISCGLRHTCVLLRDGTVMM 61
Query: 344 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G G +D G +L H V E + QVSCG +HT A+ +
Sbjct: 62 CG-ANDRGQLGQD--RPGSELAH-----------VPATETLVITQVSCGNDHTLAVTD 105
>gi|403352920|gb|EJY75989.1| Kinesin motor domain containing protein [Oxytricha trifallax]
Length = 1386
Score = 107 bits (267), Expect = 1e-20, Method: Composition-based stats.
Identities = 112/413 (27%), Positives = 182/413 (44%), Gaps = 74/413 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG G E+ P A K + ++CG H++ L+ G +++ G + GQ
Sbjct: 990 WGRGIFGQLGHGDTENYSLPTPIEALVKIQIIQVSCGWQHSMALSSQGRIFSWGYGEDGQ 1049
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGE---LYMWGKNSNGQLG 156
LG + Y L P I +K + I+ G+ HS IT DG+ LY+WG N + +L
Sbjct: 1050 LGHGDTNDYLL-PKEIDFFRKNSINVGMIACGHSHSGCIT-DGQSSQLYLWGCNPDCRLM 1107
Query: 157 LGKKAAKVIPIPTKVEC-------------LSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+ + +++P T +E L G+ +LG + VT G++ + G+
Sbjct: 1108 IEENENQLLPTLTILEQAKMKNYERGDQLKLEGLEPCYLSLGVTHTAIVTRSGELYTGGS 1167
Query: 204 GGSGRLGHGQE---------SSILGFLRSTSEYTPRLI------KELEGVKVKIAAAGFL 248
G+LG E SS+ + +E I KEL+ + I F
Sbjct: 1168 MLDGQLGVNYEAAKNDQSYPSSLSNTHQLINESNSSFINQFKDQKELKSQSLPIYRVDFF 1227
Query: 249 HS-------AC-------IDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISGGELYT 291
+ +C ++E VY FG + ++ G N + L + T
Sbjct: 1228 SAQNKATQVSCGDAFTIVLNERNEVYAFGKLSHGRLGVGNGQNLNQQKTNQLKQSIQNQT 1287
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 350
+ S E GS D + P+ +Q V Q+S G +H A +++ GK+ WG+
Sbjct: 1288 YQSTE------GSNDCIAEPQLLQSLSQSEKVVQISAGCRHAACVTDSGKLYAWGF---- 1337
Query: 351 GTFSEDGHSSGGQLGHGN-DVDYIHPTIVNFG-ENVKALQVSCGFNHTGALLE 401
F E QLG G+ + D+ PT V+ G ++ K VSCG+ HTGAL++
Sbjct: 1338 -NFYE-------QLGLGDSEKDFDVPTKVSKGLQSSKVKFVSCGYFHTGALVQ 1382
Score = 86.7 bits (213), Expect = 2e-14, Method: Composition-based stats.
Identities = 67/231 (29%), Positives = 105/231 (45%), Gaps = 12/231 (5%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+G GR G G S P A H+ L+CG H+ +T G + + G FG
Sbjct: 939 VWGSGKDGRCGNGKESSEKLP--NQANTSHNFTQLSCGYHHSAAVTSDGMILSWGRGIFG 996
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG + YSL P I L K +++Q+S G+ HS A++ G ++ WG +GQLG G
Sbjct: 997 QLGHGDTENYSL-PTPIEALVKIQIIQVSCGWQHSMALSSQGRIFSWGYGEDGQLGHGDT 1055
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG--GKVLSWGAGGSGRLG-HGQESSI 217
++P + I A G S +T G ++ WG RL E+ +
Sbjct: 1056 NDYLLPKEIDFFRKNSINVGMIACGHSHSGCITDGQSSQLYLWGCNPDCRLMIEENENQL 1115
Query: 218 LGFLRSTSEYTPRLIK-----ELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
L L + + + +LEG++ + G H+A + +G +Y G
Sbjct: 1116 LPTLTILEQAKMKNYERGDQLKLEGLEPCYLSLGVTHTAIVTRSGELYTGG 1166
Score = 77.0 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 59/209 (28%)
Query: 197 KVLSWGAGGSGRLGHGQESS-ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
KV WG+G GR G+G+ESS L +TS +L + G+ HSA +
Sbjct: 936 KVFVWGSGKDGRCGNGKESSEKLPNQANTSHNFTQL------------SCGYHHSAAV-- 981
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
S G + +WG G LG G + P ++
Sbjct: 982 ----------------------------TSDGMILSWGRGIFGQLGHGDTENYSLPTPIE 1013
Query: 316 GPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ + QVSCGW+H+ A+S +G+I +WG+G EDG QLGHG+ DY+
Sbjct: 1014 A-LVKIQIIQVSCGWQHSMALSSQGRIFSWGYG-------EDG-----QLGHGDTNDYLL 1060
Query: 375 PTIVNF--GENVKALQVSCGFNHTGALLE 401
P ++F ++ ++CG +H+G + +
Sbjct: 1061 PKEIDFFRKNSINVGMIACGHSHSGCITD 1089
Score = 71.6 bits (174), Expect = 6e-10, Method: Composition-based stats.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 51/209 (24%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
++++WG +G+ G GK++++ +P S FT Q + G+ S AVT G +LSWG
Sbjct: 936 KVFVWGSGKDGRCGNGKESSEKLPNQANT---SHNFT-QLSCGYHHSAAVTSDGMILSWG 991
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G+LGHG T Y+ P I+ L +++ + G+ HS + GR+
Sbjct: 992 RGIFGQLGHG----------DTENYSLPTPIEALVKIQIIQVSCGWQHSMALSSQGRI-- 1039
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
++WG E+G LG G + P+ + F ++
Sbjct: 1040 ----------------------------FSWGYGEDGQLGHGDTNDYLLPKEIDF-FRKN 1070
Query: 322 PVD--QVSCGWKHTAAISEG---KILTWG 345
++ ++CG H+ I++G ++ WG
Sbjct: 1071 SINVGMIACGHSHSGCITDGQSSQLYLWG 1099
>gi|348583549|ref|XP_003477535.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Cavia
porcellus]
Length = 531
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 132/301 (43%), Gaps = 49/301 (16%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHVKRVVGIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
TP + L V V G+ H+ +L
Sbjct: 223 -TPMRVAALHRVCVNQIVCGYAHTL------------------------------ALTDE 251
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTW 344
G LY WG+N G LG G+ + L +PE + E V+ +C H +A G + W
Sbjct: 252 GLLYAWGANTYGQLGTGNKNNLLNPEHIMVE-KERVVEIAACHSTHISAAKTQGGHVYMW 310
Query: 345 G 345
G
Sbjct: 311 G 311
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 115/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHVKRVVGIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPM--RVAALHRVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLN 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PEHIMVEKERV-VEIAACHSTHISAAKTQGGHVYMWG 311
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 131/289 (45%), Gaps = 51/289 (17%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P ++ ++K V T + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEVASIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V A G HS + +G V+ +G ++ G+ A +P+
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV V+Q+
Sbjct: 180 VKRVVGIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPMRV-AALHRVCVNQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
CG+ HT A+++ +L + WG ++ GQLG GN + ++P
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLNP 276
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P+ +A + + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPMRVAALHRVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLNPEHIMVEKERVVEIAACHSTHISAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ +P T C +F
Sbjct: 317 -SVTLPHLTHFSCTDDVF 333
>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
Length = 1203
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 159/333 (47%), Gaps = 47/333 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-----------DRA 266
Y P++I+ L+G+ ++ AG S + G+VY +G A
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATA 653
Query: 267 VDKMLFQEGNHARRP----------SLISGGELYTWGSNENGCLGIG-SIDVLHSPERVQ 315
+ L +E R SL E+Y WG+N G G G S + P++V
Sbjct: 654 LRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Query: 316 GPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 714 G-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H +++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G ++++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|41053397|ref|NP_956285.1| RCC1 and BTB domain-containing protein 1 [Danio rerio]
gi|28278439|gb|AAH45877.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Danio rerio]
gi|182890896|gb|AAI65711.1| Rcbtb1 protein [Danio rerio]
Length = 531
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 137/302 (45%), Gaps = 51/302 (16%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P L +L+ G G H L +TE G +YA G N + QLG + N
Sbjct: 54 LGTGDSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRIS-GLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
G S P+ +S L+ K V ++S G HHS A+T +GE++ WG N+ GQ+G G A + P
Sbjct: 114 QGVS--PILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQ--P 169
Query: 167 IPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P KV CL A G S+AVT G+V WG G+G+LG G + L
Sbjct: 170 TPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQL------- 222
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
TP + L+G V A+G+ HS +L
Sbjct: 223 --TPCRLIALQGFCVLQIASGYAHSL------------------------------ALTD 250
Query: 286 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILT 343
G LY WG+N G LG G+ SP +V E V+ +C HT+A G++
Sbjct: 251 EGLLYAWGANTYGQLGTGNKSNQLSPVQVMTE-KERIVEIAACHSTHTSAAKTQSGQVYM 309
Query: 344 WG 345
WG
Sbjct: 310 WG 311
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 121/225 (53%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSA-FEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P++ S + + ++CG H+L LT G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P ++S K +V I+ G S A+T +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P ++ L G Q A G+ S+A+T G + +WGA G+LG G +S+ L
Sbjct: 218 NGNQL--TPCRLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+ +++ E E + V+IAA H SA ++G+VY++G
Sbjct: 276 PV--------QVMTEKERI-VEIAACHSTHTSAAKTQSGQVYMWG 311
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 115/269 (42%), Gaps = 60/269 (22%)
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTG 194
IT D E+Y+ G N + LG G + + P K++CLSG K +L + + VT
Sbjct: 37 ITHDDEVYVLGLNCSNCLGTGDSQSTI--APKKLDCLSG--KKLISLSYGSGPHVLLVTE 92
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACI 253
G++ +WG G +LG+G + +P L+ L+G +V + G HS
Sbjct: 93 DGELYAWGHNGYSQLGNG---------TTNQGVSPILVSTNLQGKRVTEVSCGSHHSL-- 141
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+L GE++ WG N G +G GS +P +
Sbjct: 142 ----------------------------ALTHEGEVFAWGYNNCGQVGSGSTANQPTPRK 173
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V + ++CG + A+++ G++ WG+ G+ GQLG GN+ +
Sbjct: 174 VSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGN------------GQLGLGNNGNQ 221
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ P + + LQ++ G+ H+ AL +
Sbjct: 222 LTPCRLIALQGFCVLQIASGYAHSLALTD 250
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P A + + +A G AH+L LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
LG + N L P+++ K+ +V+I+ + H S+A T G++YMWG+
Sbjct: 265 LG-TGNKSNQLSPVQVMTEKERIVEIAACHSTHTSAAKTQSGQVYMWGQ 312
>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
Length = 4840
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 138/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3135 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3192
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3193 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV-- 3249
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + + G+VY
Sbjct: 3250 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVY------------------- 3283
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3284 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3327
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 135/302 (44%), Gaps = 47/302 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G ++ G +G+
Sbjct: 4068 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGR 4127
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4128 LGHGDSED-QLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4185
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA-GGSGRLGHGQESSIL 218
+ +P K++ L+G+ + G + SVA+T G V +W RLGHG + +
Sbjct: 4186 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRDYHRLGHGSDDHV- 4243
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
PR ++ L+G KV A G LH C E+G
Sbjct: 4244 --------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG--------------------- 4274
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
E+YTWG N+ G LG G+ + + P R+ +++V+CG HT A S
Sbjct: 4275 ---------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACGSAHTLAWST 4324
Query: 339 GK 340
K
Sbjct: 4325 SK 4326
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 162/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3063 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3120
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3121 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3231
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG G+ + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3232 TWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWG---- 3286
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3287 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 169/388 (43%), Gaps = 60/388 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3962 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4019
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4020 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4077
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S +T G + +WG G GRLGHG
Sbjct: 4078 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRLGHGD--- 4132
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4133 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186
Query: 275 GNHARRP----------------------SLISGGELYTWGS-NENGCLGIGSIDVLHSP 311
+ + P +L G +YTW + LG GS D + P
Sbjct: 4187 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRDYHRLGHGSDDHVRRP 4246
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4247 RQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTN 4293
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4294 AIQRPRLVAALQGKKINRVACGSAHTLA 4321
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 133/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L+ G V++ G D G+LG + + EP IS L K VV I+ G +
Sbjct: 505 GHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE-EPKMISALSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ + G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + + G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + SA KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ +S +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V +WG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 152/353 (43%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ +G P + L
Sbjct: 443 PIQCEGLANLGVVQVACAEKRFLILSRNGRVYTQAYN-------SDTLG----PQLVQSL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A++ +GE++ WG G+LG G +P+ P + LSG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGD----TVPLEEPKMISALSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S + P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 595
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV + G GD A+ ++ G++
Sbjct: 596 MLVTGLKGLKVIDVSCGS---------------GD-------------AQTLAVTENGQV 627
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + + +V CG + + A++ +G++ TWG G
Sbjct: 628 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDIVKVRCGSQFSIALTKDGQVYTWGKGD 686
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 687 NQ------------RLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTE 727
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 114/258 (44%), Gaps = 52/258 (20%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2957 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVA---VHSG---- 3059
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3060 -------------------GRHAM--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3098
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AAI S G++ TWG G G+LGHG++ +
Sbjct: 3099 A-LKTKRIRDIACGSSHSAAITSSGELYTWGLG------------EYGRLGHGDNTTQLK 3145
Query: 375 PTIVNFGENVKALQVSCG 392
P +V + +QV+CG
Sbjct: 3146 PKMVKVLLGHRVIQVACG 3163
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 89/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E + P++ + + + ++CG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ ++V++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 125/332 (37%), Gaps = 100/332 (30%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4016 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4075
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSACI G ++ +G
Sbjct: 4076 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYG 4126
Query: 269 KMLFQEGNHARRPSLISGGE------------------------LYTWGSNENGCLGIGS 304
++ + +P L+ + +++WG + G LG G
Sbjct: 4127 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 363
D P ++ + V +V CG + + A+++ G + TW D H +
Sbjct: 4187 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTW-------QVFRDYH----R 4234
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
LGHG+D P V + K + ++ G H
Sbjct: 4235 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4266
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GLK K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 88/217 (40%), Gaps = 33/217 (15%)
Query: 194 GGGKVLSWGAGGSGRLG--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
G G + WG G+LG G + + + + P + E + A G L++
Sbjct: 3955 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014
Query: 252 CIDENGRVYIFGDRAVDKMLFQE---------------GNHARRPSLISGGELYTWGSNE 296
GR+ I G +V E G H +L S GE+Y+WG E
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCL--ALSSEGEVYSWGEAE 4072
Query: 297 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSE 355
+G LG G+ P ++ VD V+ G H+A I+ G + TWG G
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLRGIEVVD-VAAGGAHSACITAAGDLFTWGKG-------- 4123
Query: 356 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
G+LGHG+ D + P +V + + + ++CG
Sbjct: 4124 ----RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACG 4156
>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
Length = 4285
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 2775 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2834
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 2835 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2892
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ +P +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 2893 -GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2949
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH C+
Sbjct: 2950 -------RKPQVVEGLRGKKIVHVAVGALH--CL-------------------------- 2974
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
++ G++Y WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 2975 --AVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3027
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 143/304 (47%), Gaps = 50/304 (16%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
VVQ++ G A+TV+G++Y G+ +NG+LGLG + V PIP +V LS K+ A+
Sbjct: 2698 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTV-PIPRQVTALSSYVVKKVAV 2756
Query: 185 --GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
G + A+T GKV SWG G G+LGH F R + PRLI+ L+ +++
Sbjct: 2757 HSGGRHATALTVDGKVFSWGEGDDGKLGH--------FSRMNCD-KPRLIEALKTKRIRD 2807
Query: 243 AAAGFLHSACIDENGRVYIFG-----------------DRAVDKMLFQE-------GNHA 278
A G HSA + +G +Y +G + V +L A
Sbjct: 2808 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 2867
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
+ +L G +++WG + G LG G + + P+ ++ + V Q+ CG + + A+++
Sbjct: 2868 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIER-LNGQGVCQIECGAQFSLALTK 2926
Query: 339 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
G + TWG G +LGHG+DV P +V K + V+ G H
Sbjct: 2927 SGVVWTWGKGDYF------------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCL 2974
Query: 398 ALLE 401
A+ +
Sbjct: 2975 AVTD 2978
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +++ L VV+ + +G H
Sbjct: 2703 GGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQVTALSSYVVKKVAVHSGGRH 2762
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 2763 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 2820
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 2821 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2871
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 2872 LTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2931
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 2932 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG---- 2986
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 2987 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3027
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 124/252 (49%), Gaps = 21/252 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + SVA+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ P+L++ L+G KV AAG H + E+ V+ +G+ +
Sbjct: 696 EHV---------RYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSWGNNDQCQHFDTL 746
Query: 275 GNHARRPSLISG 286
PSL+ G
Sbjct: 747 HQTKPEPSLLPG 758
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 163/379 (43%), Gaps = 51/379 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3636 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3693
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ S LE ++ ++K V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3694 GRLGVGGTESVSAPTLLESIQHVFIRK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3751
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P VE L G A G S VT G + +WG G GRLGH
Sbjct: 3752 HGNRSP--CDRPRVVESLRGTEVVDIAAGGAHSACVTSAGDLYTWGKGRYGRLGHSD--- 3806
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDK----- 269
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K
Sbjct: 3807 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3860
Query: 270 -------MLFQEGNHARRPSL--ISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
M RPS S L G + LG GS D + P +VQG
Sbjct: 3861 SDGCKVPMKVPLSLRVGRPSTPPPSWPRLDVGGKGDYHRLGHGSDDHVRRPRQVQG-LQG 3919
Query: 321 SPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
V ++ G H + EG++ TW G + GQLG G P +V
Sbjct: 3920 KKVIAIATGSLHCVCCTEEGEVYTW------------GDNDEGQLGDGTTNAIQRPRLVA 3967
Query: 380 FGENVKALQVSCGFNHTGA 398
+ K +V+CG HT A
Sbjct: 3968 ALQGRKVNRVACGSAHTLA 3986
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 147/353 (41%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQSKGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV A G GD A+ ++ G++
Sbjct: 596 MLVAGLKGLKVIDVACG---------------SGD-------------AQPLAVTDNGQV 627
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG G
Sbjct: 628 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSVALTKDGQVYSWGKGD 686
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 687 NQ------------RLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTE 727
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 119/309 (38%), Gaps = 72/309 (23%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
A+ GG H L L+ G VY+ G + G+LG N P + L+ EVV I+ G
Sbjct: 3722 AVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVVESLRGTEVVDIAAGGA 3780
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVA 191
HS+ +T G+LY WGK G+LG ++ P VE L G A G Q++
Sbjct: 3781 HSACVTSAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEALQGHRVVDVACGSGDAQTLC 3838
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSI---------------------------------- 217
+T V SWG G G+LG G
Sbjct: 3839 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKVPLSLRVGRPSTPPPSWPRLDVGGKGDYH 3898
Query: 218 -LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
LG PR ++ L+G KV A G LH C E G
Sbjct: 3899 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEEG------------------- 3939
Query: 277 HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 336
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A
Sbjct: 3940 -----------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGRKVNRVACGSAHTLAW 3987
Query: 337 SEGKILTWG 345
S K + G
Sbjct: 3988 STSKPASAG 3996
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 97/236 (41%), Gaps = 50/236 (21%)
Query: 165 IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
I +P+ E LS + Q A G + AVT GKV + G +GRLG G S +
Sbjct: 2684 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPI---- 2739
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
PR + L VK A +HS G HA +L
Sbjct: 2740 ----PRQVTALSSYVVKKVA---VHSG-----------------------GRHAT--ALT 2767
Query: 285 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILT 343
G++++WG ++G LG S P ++ + ++CG H+AA+ S G++ T
Sbjct: 2768 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYT 2826
Query: 344 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
WG G G+LGHG++ + P +V + +QV+CG L
Sbjct: 2827 WGLG------------EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 2870
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 109/252 (43%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3631 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3688
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ P L++ ++ V F+ ++ G+ +
Sbjct: 3689 GYGAGGRLGVGGTESV---------SAPTLLESIQHV--------FIRKVAVNSGGKHCL 3731
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P V+
Sbjct: 3732 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGTE 3771
Query: 322 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD ++ G H+A + S G + TWG G G+LGH + D + P +V
Sbjct: 3772 VVD-IAAGGAHSACVTSAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 3818
Query: 381 GENVKALQVSCG 392
+ + + V+CG
Sbjct: 3819 LQGHRVVDVACG 3830
>gi|332233498|ref|XP_003265939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Nomascus leucogenys]
Length = 984
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 141/309 (45%), Gaps = 42/309 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGD------------------ 262
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
N +G LG P+ V+ + V QV CG HT A + G+
Sbjct: 263 ------------NRSGQLGYSPTPEKRGPQLVE--IIDGLVSQVDCGSYHTLAYVHTTGQ 308
Query: 341 ILTWGWGGS 349
++++G G S
Sbjct: 309 VVSFGHGPS 317
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 145/330 (43%), Gaps = 65/330 (19%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLR-ISGLKKEVVQISTGYHH 134
A G H+L L V + G N GQLG G EP++ + L ++V S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLV--SCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G + ++ P K+ L+GI Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-ELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSF--- 194
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
+L G + WGSN G L + +V P +
Sbjct: 195 ---------------------------ALSLCGTSFGWGSNSAGQLALSGRNV---PVQS 224
Query: 315 QGPFSESPVDQ-----VSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
P S + +SCG +HTA +++ GK+ T+G D S GQLG+
Sbjct: 225 NKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFG----------DNRS--GQLGYSP 272
Query: 369 DVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+ P +V + + + QV CG HT A
Sbjct: 273 TPEKRGPQLVEIIDGLVS-QVDCGSYHTLA 301
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 123/282 (43%), Gaps = 56/282 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAPRGELPEPIQALETLNVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G HS + ++ +V ++WG N +G LG+G
Sbjct: 134 SCGHYHSLALSKDSQV------------------------------FSWGKNSHGQLGLG 163
Query: 304 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
SP+RV+ P+ QV+ G H+ A+S ++GWG +S G
Sbjct: 164 KEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLCGT-SFGWGS----------NSAG 211
Query: 363 QL---GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QL G V P V +N+ + +SCG HT L +
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQ 253
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G L E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G E + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ ++ + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFG 313
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 78/188 (41%), Gaps = 38/188 (20%)
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG---------- 286
G ++ AA+G HS + N RV GD + ++ + P I
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVS 81
Query: 287 ------------GELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 333
G ++ WG+ G LGIG + ++ +P+++ + + QVSCG H+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITT-LNGIKIIQVSCGHYHS 140
Query: 334 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 391
A+S + ++ +W G +S GQLG G + P V E + QV+
Sbjct: 141 LALSKDSQVFSW------------GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAA 188
Query: 392 GFNHTGAL 399
G H+ AL
Sbjct: 189 GGAHSFAL 196
>gi|403377072|gb|EJY88530.1| hypothetical protein OXYTRI_12294 [Oxytricha trifallax]
Length = 709
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 152/354 (42%), Gaps = 65/354 (18%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKN 150
V++ G N G+LG + L P R+ GL K +V+ +S+G HS +T DG+L+M G N
Sbjct: 86 VWSFGQNTKGELGTG-HYNEVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCGSN 144
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+ +LGL VE L+ IF KQ A G ++A++ G+V WG + G
Sbjct: 145 LHDKLGLEGITTGSKKTFKPVELLTQIFIKQVACGDYHTLALSKEGQVYVWGGSLHNKRG 204
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY---------- 260
+ + ++Y P L++ G K+K G HS +D+NG +Y
Sbjct: 205 DRSQER-----KDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDDNGTLYSWGVGEKGEC 259
Query: 261 ---IFGDRAVDKML----------FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDV 307
F D+ + + + GNH ++ + ++Y WG G G G +
Sbjct: 260 GHGKFEDQETPQRIKFFDGKIITQIEAGNH-HTLAITADNQVYAWGDGRYGQCGFGEFEN 318
Query: 308 LHSPERVQGP--------------------FSESP-VDQVSCGWKHTAAI-SEGKILTWG 345
P+ V P F + P + Q++ G HT + S G+I ++G
Sbjct: 319 TAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSGQIFSFG 378
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ + GQLGH +Y P +V N K +QV+ G NH+ L
Sbjct: 379 Y------------NQQGQLGHNTVDNYCRPKLVEGMLNHKTVQVAAGRNHSLCL 420
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 112/248 (45%), Gaps = 35/248 (14%)
Query: 42 LWGNGDYGRLGLGSLE----SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG + + G S E ++++PV+ +F +K + CG H+L L + G +Y+ G+
Sbjct: 194 VWGGSLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDDNGTLYSWGV 253
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+ G+ G + P RI K + QI G HH+ AIT D ++Y WG GQ G
Sbjct: 254 GEKGECGHGK-FEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVYAWGDGRYGQCG 312
Query: 157 LGKKAAKVIP----IPTKVECLSGIFT----------------KQAALGFEQSVAVTGGG 196
G+ IP P++ S + KQ A G ++ +T G
Sbjct: 313 FGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSG 372
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
++ S+G G+LGH +++ + R P+L++ + K AAG HS C+
Sbjct: 373 QIFSFGYNQQGQLGH---NTVDNYCR------PKLVEGMLNHKTVQVAAGRNHSLCLTNK 423
Query: 257 GRVYIFGD 264
VY G+
Sbjct: 424 NDVYACGN 431
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCS--------------------AFEKH--SLKALACGG 80
WG+G YG+ G G E+ P + + F K +K +A G
Sbjct: 303 WGDGRYGQCGFGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGE 362
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
HTL LT +G +++ G N GQLG + Y L L + VQ++ G +HS +T
Sbjct: 363 MHTLVLTSSGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGMLNHKTVQVAAGRNHSLCLTN 422
Query: 141 DGELYMWGKNSNGQLGLGKKAAK 163
++Y G N GQ GL + +
Sbjct: 423 KNDVYACGNNQYGQCGLPDREMR 445
>gi|328876892|gb|EGG25255.1| inositol 5-phosphatase [Dictyostelium fasciculatum]
Length = 1338
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 159/333 (47%), Gaps = 60/333 (18%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
+ +++CG HT+ T+ V++ G N+ GQLG+ ++I S PLR+ L ++ QI G
Sbjct: 79 VNSVSCGLNHTILSTDDDGVWSMGYNNEGQLGVGQDISESAVPLRVL-LPPDIRQIVAGP 137
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGK---KAAKVIPIPTKV--ECLSGIFT-------- 179
+AIT DGELYMWG GQL GK +A +++P P ++ + L+ +
Sbjct: 138 MTGAAITSDGELYMWGSAKYGQLANGKASDRANQMVPQPAQLPLDDLNVSSSSVGSGGRV 197
Query: 180 --KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
++ G + ++ +T G V SWG G+LG G ++ ++I L
Sbjct: 198 RWRKVTFGEKHTIGLTRRGTVYSWGINEFGQLGLGHRNN-------------KVIPVL-- 242
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNEN 297
V +K A G EN + D + G H+ +L G LY WGSN+
Sbjct: 243 VDLKSMAGG--------ENNAYFKIVD------ISSGGYHSS--ALSEEGILYCWGSNQY 286
Query: 298 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSED 356
G +G G ++ SP +++ + V +V+ G HT ++ G++ T+
Sbjct: 287 GQIGNGDLEDQVSPVKIKVDVEDKKVKKVAMGSNHTVLVTITGEVYTF------------ 334
Query: 357 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 389
G+S QLGHGN+ + + P+++ +KA +
Sbjct: 335 GNSDYYQLGHGNNKNRMWPSLIVKPPKLKASDI 367
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 26/200 (13%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFE-----------------KHSLKALACGGAHTL 84
+WG+ YG+L G R +V + + + + G HT+
Sbjct: 151 MWGSAKYGQLANGKASDRANQMVPQPAQLPLDDLNVSSSSVGSGGRVRWRKVTFGEKHTI 210
Query: 85 FLTETGCVYATGLNDFGQLGI----SENIGYSLEPLRISGLKK----EVVQISTGYHHSS 136
LT G VY+ G+N+FGQLG+ ++ I ++ ++G + ++V IS+G +HSS
Sbjct: 211 GLTRRGTVYSWGINEFGQLGLGHRNNKVIPVLVDLKSMAGGENNAYFKIVDISSGGYHSS 270
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
A++ +G LY WG N GQ+G G +V P+ KV+ + K+ A+G +V VT G
Sbjct: 271 ALSEEGILYCWGSNQYGQIGNGDLEDQVSPVKIKVD-VEDKKVKKVAMGSNHTVLVTITG 329
Query: 197 KVLSWGAGGSGRLGHGQESS 216
+V ++G +LGHG +
Sbjct: 330 EVYTFGNSDYYQLGHGNNKN 349
>gi|297603670|ref|NP_001054420.2| Os05g0106700 [Oryza sativa Japonica Group]
gi|255675937|dbj|BAF16334.2| Os05g0106700 [Oryza sativa Japonica Group]
Length = 685
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 156/373 (41%), Gaps = 71/373 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E P + + ++ +ACG HT +T TG +Y G ++
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + G+ + P RISG V +S G H++ IT G+L+ +G S G LG G
Sbjct: 161 GLLGHGTDAGHWI-PKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-----------TGGGKVLSWGAGGSG 207
+ I P +VE LSG+ T A G + A+ GK+ +WG G
Sbjct: 220 NLTS--ISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKH 277
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + S L P + L A G + C+ +G+V G+ +V
Sbjct: 278 RLGHGDKESRL---------KPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGN-SV 327
Query: 268 DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
L + R P L+ +R+ G V QV+
Sbjct: 328 YGQLGNPNSDGRLPCLVE--------------------------DRIAGEH----VLQVA 357
Query: 328 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG H A ++ ++ TWG G + G+LGHG+ D PT V ++
Sbjct: 358 CGSYHVAVLTGRSEVFTWGKGAN------------GRLGHGDIEDRKVPTQVEALKDRAV 405
Query: 387 LQVSCGFNHTGAL 399
++CG N T A+
Sbjct: 406 RHIACGANFTAAI 418
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 128/301 (42%), Gaps = 70/301 (23%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H++ +T +G+++ WG++S G+LG G + V P VE
Sbjct: 69 KPLE-SRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG ++ + P+
Sbjct: 126 LAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDA---------GHWIPKR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
I L+G+ V + G H+A I G+++ FGD +
Sbjct: 177 ISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSF----------------------- 213
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------------ 338
G LG G++ + P+ V+ S V+CG HTAAI E
Sbjct: 214 -------GVLGHGNLTSISCPKEVES-LSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSA 265
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
GK+ TWG G H +LGHG+ + PT V + +V+CG + T
Sbjct: 266 GKLFTWGDGDKH------------RLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVC 313
Query: 399 L 399
L
Sbjct: 314 L 314
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 114/274 (41%), Gaps = 65/274 (23%)
Query: 142 GELYMWGK---------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
G++Y+WG+ S+ + +K ++P P + + ++ G + V
Sbjct: 35 GDVYVWGEVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVY--HVDCGVRHAALV 92
Query: 193 TGGGKVLSWGAGGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
T G V +WG GRLGHG +E S+ PRL++ L V A G H+
Sbjct: 93 TRNGDVFTWGEDSGGRLGHGTREDSV----------HPRLVESLAACNVDFVACGEFHTC 142
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH-S 310
+ G +Y +GD G++ G LG G+ D H
Sbjct: 143 AVTTTGELYTWGD----------------------------GTHNVGLLGHGT-DAGHWI 173
Query: 311 PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 369
P+R+ G PV VSCG HTA I S G++ T+G G S G LGHGN
Sbjct: 174 PKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDG------------SFGVLGHGNL 221
Query: 370 VDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
P V +K + V+CG HT A++E +
Sbjct: 222 TSISCPKEVESLSGLKTIAVACGVWHTAAIVEVI 255
>gi|440796629|gb|ELR17738.1| ubiquitin ligase, putative [Acanthamoeba castellanii str. Neff]
Length = 1287
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 170/398 (42%), Gaps = 85/398 (21%)
Query: 43 WGNGDYGRLG-LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G LG G +E W P+ + +K +A G H+L LTE G V + GLND G
Sbjct: 572 WGANSDGVLGHTGGIEQLW-PLAIESLSSVQVKMVAAGEFHSLCLTENGEVTSFGLNDQG 630
Query: 102 QLGI-------SENIGYSLEPLRI----SGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
Q G S ++ P I KK VV I+ G +HS+ +T DGELY +G+
Sbjct: 631 QCGQPITKIAESSDLAAVARPRPIVLPDDLRKKTVVSIAAGGYHSALVTADGELYTFGRG 690
Query: 151 SNGQLG------LGK------------KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
QLG LG+ + + P PT++ L+G KQ A G S V
Sbjct: 691 GEFQLGHDTVMALGEGGNALHYRSNSAQTSYFQPKPTRLSALNGQVVKQVACGRFHSACV 750
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI---AAAGFLH 249
T G + +WG G +G+LGHG T + TP+ ++ G+K KI A G H
Sbjct: 751 TEEGALYTWGRGANGQLGHGD---------MTDQATPKRVE--AGIKDKIMVKVACGENH 799
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
SA +D G +Y G G+ + + + G+ + ++ GC G G
Sbjct: 800 SAAVDSAGVIYTTG-----------GDESGQ---LGKGDEWICATHGEGCTGSG----WS 841
Query: 310 SPERVQGPFSESPVDQV-----SCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQ 363
ER+ S V V +CG AAI+ G + TWG G
Sbjct: 842 CQERIPTFLSILSVRHVQFVDIACGHGFCAAITNRGLLYTWG--------------KGTA 887
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
LG G D PT ++ + V + V+CG H AL +
Sbjct: 888 LGLGPSGDVSEPTHLSSIDGV--VSVACGDIHAAALTD 923
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 135/335 (40%), Gaps = 59/335 (17%)
Query: 58 SRWRPVVC-SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG------------ 104
+R RP+V K ++ ++A GG H+ +T G +Y G QLG
Sbjct: 649 ARPRPIVLPDDLRKKTVVSIAAGGYHSALVTADGELYTFGRGGEFQLGHDTVMALGEGGN 708
Query: 105 -------ISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLG 156
++ + +P R+S L +VV Q++ G HS+ +T +G LY WG+ +NGQLG
Sbjct: 709 ALHYRSNSAQTSYFQPKPTRLSALNGQVVKQVACGRFHSACVTEEGALYTWGRGANGQLG 768
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE-- 214
G + P + I K A G S AV G + + G SG+LG G E
Sbjct: 769 HGDMTDQATPKRVEAGIKDKIMVK-VACGENHSAAVDSAGVIYTTGGDESGQLGKGDEWI 827
Query: 215 -----SSILGFLRSTSEYTPRLIKELEGVKVKIA--AAGFLHSACIDENGRVYIFGD--- 264
G S E P + L V+ A G A I G +Y +G
Sbjct: 828 CATHGEGCTGSGWSCQERIPTFLSILSVRHVQFVDIACGHGFCAAITNRGLLYTWGKGTA 887
Query: 265 ---------------RAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSID--V 307
++D ++ +L G+LY WGS+E G LG G V
Sbjct: 888 LGLGPSGDVSEPTHLSSIDGVVSVACGDIHAAALTDKGQLYMWGSSEAGRLGDGRSTEGV 947
Query: 308 LHSPERVQGPFSESPVDQVSC-----GWKHTAAIS 337
+P+ V F++ + Q C G +H AIS
Sbjct: 948 TRTPKLVPA-FAD--IHQARCLGVSIGPRHALAIS 979
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 131/302 (43%), Gaps = 36/302 (11%)
Query: 105 ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV 164
IS+ SL L + LK + + Y+ + G + WG NS+G LG ++
Sbjct: 531 ISKQNMTSLHLLSEASLKNKSEEFIAEYYKNIKEQT-GLILSWGANSDGVLGHTGGIEQL 589
Query: 165 IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-----GQESSILG 219
P+ +E LS + K A G S+ +T G+V S+G G+ G + S +
Sbjct: 590 WPLA--IESLSSVQVKMVAAGEFHSLCLTENGEVTSFGLNDQGQCGQPITKIAESSDLAA 647
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
R P ++ + V IAA G+ HSA + +G +Y FG FQ G H
Sbjct: 648 VARPRPIVLPDDLR--KKTVVSIAAGGY-HSALVTADGELYTFGRGGE----FQLG-HDT 699
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
+L GG + SN + P R+ + V QV+CG H+A ++ E
Sbjct: 700 VMALGEGGNALHYRSN-----SAQTSYFQPKPTRLSA-LNGQVVKQVACGRFHSACVTEE 753
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL-QVSCGFNHTG 397
G + TWG G + GQLGHG+ D P V G K + +V+CG NH+
Sbjct: 754 GALYTWGRGAN------------GQLGHGDMTDQATPKRVEAGIKDKIMVKVACGENHSA 801
Query: 398 AL 399
A+
Sbjct: 802 AV 803
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 114/263 (43%), Gaps = 43/263 (16%)
Query: 4 RSLTAMTKYYLKQDIKLGS------KLGICKRWISSTLQRRFAAL-WGNGDYGRLGLGSL 56
RS +A T Y+ + +L + K C R+ S+ + A WG G G+LG G +
Sbjct: 713 RSNSAQTSYFQPKPTRLSALNGQVVKQVACGRFHSACVTEEGALYTWGRGANGQLGHGDM 772
Query: 57 ESRWRPVVCSA-FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG----------- 104
+ P A + + +ACG H+ + G +Y TG ++ GQLG
Sbjct: 773 TDQATPKRVEAGIKDKIMVKVACGENHSAAVDSAGVIYTTGGDESGQLGKGDEWICATHG 832
Query: 105 ---------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
E I L L + + + V I+ G+ +AIT G LY WGK + L
Sbjct: 833 EGCTGSGWSCQERIPTFLSILSVRHV--QFVDIACGHGFCAAITNRGLLYTWGKGT--AL 888
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
GLG + PT + + G+ + A G + A+T G++ WG+ +GRLG G+
Sbjct: 889 GLGPSGD--VSEPTHLSSIDGVVS--VACGDIHAAALTDKGQLYMWGSSEAGRLGDGR-- 942
Query: 216 SILGFLRSTSEYTPRLIKELEGV 238
S G R TP+L+ +
Sbjct: 943 STEGVTR-----TPKLVPAFADI 960
>gi|115528070|gb|AAI24692.1| Sergef protein [Danio rerio]
Length = 423
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 169/391 (43%), Gaps = 54/391 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LG G+ E + P V S ++ ++A+ GG H+ ++++G + G N G
Sbjct: 42 WGANSYGQLGQGNAEDQAEPRRVESGLQEEQIRAVTGGGGHSALISDSGELLVCGQNHKG 101
Query: 102 QLGISENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + + + + G + V Q+S G+ + +T DG + G N+ GQLG+ +
Sbjct: 102 QLGLGHTLEIMTFQTCPLPGFGR-VQQVSCGWDFTIILTGDGLVLACGSNAFGQLGVSAE 160
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P ++ T AA G ++A T G V WG G S +
Sbjct: 161 KTHSAE-PLLLKSFHEPVTSVAA-GLRHALASTASGCVYQWGTGLSSHAKRMLNPQPVPS 218
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR--------------- 265
S+ E P L+ V + AG H AC+ NG ++++G
Sbjct: 219 HLSSKE--PCLVPGFAHVTTQKVIAGSAHCACLTVNGELFLWGSNKHGQLISGSLFLPLP 276
Query: 266 -AVDKMLFQEGN----HARRPSLIS---GGELYTWGSNENGCLGIG-------SID--VL 308
A+D+ + Q+ H+ L++ G ++TWG + G LG S D ++
Sbjct: 277 VALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSNYGQLGQTNHSMEKQSCDEHLV 336
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
SP V+ F + Q+SCG +H A+ G++ +WGW + G G G+
Sbjct: 337 RSPVEVKALFGAT---QISCGSEHNLAVVGGRVFSWGW------------NEHGMCGDGS 381
Query: 369 DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
D P + + AL + CG H+ AL
Sbjct: 382 LQDITQPQPIPALADAVALLIGCGAGHSMAL 412
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 147/347 (42%), Gaps = 61/347 (17%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRI-SGLKKEVVQISTGYH-HSSAITVDGELYMWGK 149
+Y G N +GQLG N EP R+ SGL++E ++ TG HS+ I+ GEL + G+
Sbjct: 39 LYTWGANSYGQLG-QGNAEDQAEPRRVESGLQEEQIRAVTGGGGHSALISDSGELLVCGQ 97
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIF--TKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
N GQLGLG + I T C F +Q + G++ ++ +TG G VL+ G+ G
Sbjct: 98 NHKGQLGLG----HTLEIMTFQTCPLPGFGRVQQVSCGWDFTIILTGDGLVLACGSNAFG 153
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---- 263
+LG E T P L+K V AAG H+ +G VY +G
Sbjct: 154 QLGVSAE--------KTHSAEPLLLKSFHE-PVTSVAAGLRHALASTASGCVYQWGTGLS 204
Query: 264 ---DRAVDKMLFQEGNHARRPSLISG----------------------GELYTWGSNENG 298
R ++ ++ P L+ G GEL+ WGSN++G
Sbjct: 205 SHAKRMLNPQPVPSHLSSKEPCLVPGFAHVTTQKVIAGSAHCACLTVNGELFLWGSNKHG 264
Query: 299 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDG 357
L GS+ + + + V V GW H A +E G++ TWG
Sbjct: 265 QLISGSLFLPLPVALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWG---------RSN 315
Query: 358 HSSGGQLGHGNDVDYIHPTIVNFGENVKAL----QVSCGFNHTGALL 400
+ GQ H + +V VKAL Q+SCG H A++
Sbjct: 316 YGQLGQTNHSMEKQSCDEHLVRSPVEVKALFGATQISCGSEHNLAVV 362
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 21/149 (14%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVC--SAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
LWG+ +G+L GSL PV S + + + G H + TE+G V+ G ++
Sbjct: 257 LWGSNKHGQLISGSLFLPL-PVALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSN 315
Query: 100 FGQLGISENIGYSLE-----------PLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
+GQLG +S+E P+ + L QIS G H+ A+ V G ++ WG
Sbjct: 316 YGQLG---QTNHSMEKQSCDEHLVRSPVEVKALFG-ATQISCGSEHNLAV-VGGRVFSWG 370
Query: 149 KNSNGQLGLG--KKAAKVIPIPTKVECLS 175
N +G G G + + PIP + ++
Sbjct: 371 WNEHGMCGDGSLQDITQPQPIPALADAVA 399
>gi|403331454|gb|EJY64675.1| putative protein similar to vertebrate hect domain and RLD 3 (HERC3)
[Oxytricha trifallax]
Length = 2049
Score = 107 bits (266), Expect = 1e-20, Method: Composition-based stats.
Identities = 116/460 (25%), Positives = 186/460 (40%), Gaps = 105/460 (22%)
Query: 15 KQDIKLGSKLGICKRWISSTLQRRFAAL---WGNGDYGRLGLGSLESRWR---------- 61
K+++ LGS I + + ++ + G + G+LGL L +
Sbjct: 1562 KRNLHLGSYSQILGKEVGGINKQEMCGILFSMGTDNNGQLGLDVLSQDDQHSSHTPSIKV 1621
Query: 62 --PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
P + + + ++ + CG +HT+ + +G V+ G N GQLG+ +N L
Sbjct: 1622 LYPRMIISLKDEVIREVCCGNSHTMVINMSGQVFVWGANQTGQLGLGDNSPQIL------ 1675
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
S GY HS AIT ELY+WG S G G+G + P+ S I T
Sbjct: 1676 ---------SAGYEHSIAITKSNELYIWG--SGGLCGIGTLKQQNAPVKIDFFNKSKILT 1724
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE----YTPRLIKEL 235
A G +VAVT + SWG G+LG Q S+I+ + + TP+ I +L
Sbjct: 1725 --AVCGGLHTVAVTKDWEAYSWGLTEGGQLGLPQ-STIVKLCQGQGDEPQVLTPQRIPKL 1781
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM------------LFQEGNHARRPSL 283
EG+++ A G HS + ++G +Y +G ++ L E + P
Sbjct: 1782 EGLQIAQVACGEAHSIAMTKDGTIYGWGQSNYGQLGLGFSGDSFEPGLGMEKSKVYEPQE 1841
Query: 284 ISG----------------------GELYTWGSNENGCLG---------IGSIDVLHS-- 310
I+G G+LY G N+ G LG I S++ +
Sbjct: 1842 INGLKHEKISKIICGATFTLFQTDKGDLYGCGVNDLGQLGLDTFMEEMQIASLEKVKKGK 1901
Query: 311 ---------PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 360
P RV F + Q++CG H+ A+S +G + W W G
Sbjct: 1902 HNQTSDVILPTRVIC-FQGIAIHQIACGESHSLAVSGDGMNMLWAW----------GMFK 1950
Query: 361 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
GQLG G ++P V + + +++CG H+ AL+
Sbjct: 1951 NGQLGLGEVTMKLNPRPVQSLCSSQIQRIACGSMHSVALI 1990
>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
Length = 4706
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 138/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + + G+VY
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVY------------------- 3280
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3281 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3324
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 162/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG G+ + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3229 TWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWG---- 3283
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3284 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 133/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG V++ G D G+LG + + EP IS L K VV I+ G +
Sbjct: 505 GHHYLALAATGEVFSWGCGDGGRLGHGDTVPLE-EPKMISALSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ + G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSVA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVH 732
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ + PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRIT-KPEPTALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + SA KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ +S +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + SVA+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWG 735
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 93/211 (44%), Gaps = 42/211 (19%)
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
+G + +T D ++ WG G+LG G + +P K++ L+G+ + G + S
Sbjct: 4024 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFS 4081
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VA+T G V +WG G RLGHG + + PR ++ L+G KV A G LH
Sbjct: 4082 VALTKSGAVYTWGKGDYHRLGHGSDDHV---------RRPRQVQGLQGKKVIAIATGSLH 4132
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
C E+G E+YTWG N+ G LG G+ + +
Sbjct: 4133 CVCCTEDG------------------------------EVYTWGDNDEGQLGDGTTNAIQ 4162
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
P R+ +++V+CG HT A S K
Sbjct: 4163 RP-RLVAALQGKKINRVACGSAHTLAWSTSK 4192
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVA---VHSG---- 3056
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3057 -------------------GRHAM--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3095
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AAI S G++ TWG G G+LGHG++ +
Sbjct: 3096 A-LKTKRIRDIACGSSHSAAITSSGELYTWGLG------------EYGRLGHGDNTTQLK 3142
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTL 3167
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 77/150 (51%), Gaps = 4/150 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P+ + + + CG ++ LT++G VY G D+ +
Sbjct: 4041 WGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR 4100
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + P ++ GL+ K+V+ I+TG H T DGE+Y WG N GQLG G
Sbjct: 4101 LGHGSD-DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4159
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
A I P V L G + A G ++A
Sbjct: 4160 A--IQRPRLVAALQGKKINRVACGSAHTLA 4187
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 89/187 (47%), Gaps = 15/187 (8%)
Query: 67 AFEKHSLKALACGG--AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
A + + + +ACG A TL LT+ V++ G D+G+LG + G + P++I L
Sbjct: 4011 ALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV-PMKIDSLTGL 4069
Query: 125 -VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
VV++ G S A+T G +Y WGK +LG G + P +V+ L G A
Sbjct: 4070 GVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH--VRRPRQVQGLQGKKVIAIA 4127
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G V T G+V +WG G+LG G ++I PRL+ L+G K+
Sbjct: 4128 TGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAI---------QRPRLVAALQGKKINRV 4178
Query: 244 AAGFLHS 250
A G H+
Sbjct: 4179 ACGSAHT 4185
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 128/320 (40%), Gaps = 68/320 (21%)
Query: 115 PLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSN---GQLGLGKKAAKVIPIPTK 170
P++ GL + QI+ ++ +G +YM NS+ QL G + ++ I
Sbjct: 443 PIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLGPQLVQGLASRNIVKI--- 499
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
A +A+ G+V SWG G GRLGHG + P+
Sbjct: 500 ----------AAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPL---------EEPK 540
Query: 231 LIKELEGVK----VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
+I L G + V A G +SA I G +Y +G ++ P L++G
Sbjct: 541 MISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTG 600
Query: 287 ------------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
G++++WG + G LG G D +P+ ++ +
Sbjct: 601 LKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLD 659
Query: 323 VDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
V +V CG + + A++ +G++ +WG G + +LGHG + +P ++
Sbjct: 660 VVKVRCGSQFSVALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGL 707
Query: 382 ENVKALQVSCGFNHTGALLE 401
+ K + V+ G H AL E
Sbjct: 708 QGKKVVDVAAGSTHCLALTE 727
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 101/287 (35%), Gaps = 84/287 (29%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV--- 198
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GKV
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEAL 4012
Query: 199 --------------------------LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
SWG G G+LG G S P I
Sbjct: 4013 QGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMKI 4063
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW 292
L G+ V G S +L G +YTW
Sbjct: 4064 DSLTGLGVVKVECGSQFSV------------------------------ALTKSGAVYTW 4093
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 351
G + LG GS D + P +VQG V ++ G H +E G++ TWG
Sbjct: 4094 GKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG------ 4146
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+ GQLG G P +V + K +V+CG HT A
Sbjct: 4147 ------DNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4187
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
WG GD RLG G+ E P + + + +A G H L LTE V++ G ND
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
F L I++ EP + GL K +V I+ G S A
Sbjct: 742 HFDTLRITKP-----EPTALPGLDTKHIVGIACGPAQSFA 776
>gi|330797026|ref|XP_003286564.1| hypothetical protein DICPUDRAFT_77429 [Dictyostelium purpureum]
gi|325083469|gb|EGC36921.1| hypothetical protein DICPUDRAFT_77429 [Dictyostelium purpureum]
Length = 1440
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 154/325 (47%), Gaps = 64/325 (19%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQI 128
K + +++CG HTL LT +++ G N GQLGI EN+ S PL + L+K V++I
Sbjct: 73 KRRVVSVSCGFNHTLLLTSEYKIFSMGFNQVGQLGI-ENVVDSAVPLPVDTLQKCNVIKI 131
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGK---KAAKVIPIPTKVECLS---------- 175
G + S+AIT G+LY+WG +S GQLG GK K+ + IP +S
Sbjct: 132 KAGNNISAAITDKGDLYIWGTSSFGQLGNGKMNPKSNQFIPTTILEPFISEQEKDNPIYQ 191
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKE 234
I G + ++AV+ G + SWG+ G+LG G + ++ + ++ R++ +
Sbjct: 192 NIQYSNVCFGAQHTIAVSTTGTIFSWGSNQYGQLGLGHCNTKLVPVPVRFNRHSTRIVVD 251
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGS 294
+ A+G HS+ L G++Y WGS
Sbjct: 252 I--------ASGNFHSSL------------------------------LTLEGDVYLWGS 273
Query: 295 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTF 353
N+ G LG G L+ P++V+G +++++ G HT +++ + + T+G + F
Sbjct: 274 NQYGQLGQGDTIDLNVPKKVKGSIEFKKINRMALGNNHTILLTKDQDVYTFG----NNEF 329
Query: 354 SEDGHSSGGQLGHGNDVDYIHPTIV 378
+ GH G +G N + + PT++
Sbjct: 330 YQLGH---GSMGGKNKIYF--PTLI 349
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 35/252 (13%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSA---------------FEKHSLKALACGGAHTLFL 86
+WG +G+LG G + + + + ++ + G HT+ +
Sbjct: 149 IWGTSSFGQLGNGKMNPKSNQFIPTTILEPFISEQEKDNPIYQNIQYSNVCFGAQHTIAV 208
Query: 87 TETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGEL 144
+ TG +++ G N +GQLG+ N P+R + VV I++G HSS +T++G++
Sbjct: 209 STTGTIFSWGSNQYGQLGLGHCNTKLVPVPVRFNRHSTRIVVDIASGNFHSSLLTLEGDV 268
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
Y+WG N GQLG G + +P KV+ + + ALG ++ +T V ++G
Sbjct: 269 YLWGSNQYGQLGQGDTID--LNVPKKVKGSIEFKKINRMALGNNHTILLTKDQDVYTFGN 326
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+LGHG S+ G Y P LI++ + I AAG + Y
Sbjct: 327 NEFYQLGHG---SMGG---KNKIYFPTLIQKPRLLVSDIFAAG---------DSSAYFVI 371
Query: 264 DRAVDKMLFQEG 275
D + D + G
Sbjct: 372 DESPDPSILNNG 383
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 105/239 (43%), Gaps = 27/239 (11%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G G+LG+ ++ P+ +K ++ + G + +T+ G +Y G + FGQL
Sbjct: 99 GFNQVGQLGIENVVDSAVPLPVDTLQKCNVIKIKAGNNISAAITDKGDLYIWGTSSFGQL 158
Query: 104 GISENIGYS--------LEPLRISGLKKEV-----VQIST---GYHHSSAITVDGELYMW 147
G + S LEP IS +K+ +Q S G H+ A++ G ++ W
Sbjct: 159 GNGKMNPKSNQFIPTTILEPF-ISEQEKDNPIYQNIQYSNVCFGAQHTIAVSTTGTIFSW 217
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G N GQLGLG K++P+P + S A G S +T G V WG+ G
Sbjct: 218 GSNQYGQLGLGHCNTKLVPVPVRFNRHSTRIVVDIASGNFHSSLLTLEGDVYLWGSNQYG 277
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
+LG G + P+ +K +E K+ A G H+ + ++ VY FG+
Sbjct: 278 QLGQGDTIDL---------NVPKKVKGSIEFKKINRMALGNNHTILLTKDQDVYTFGNN 327
>gi|384251643|gb|EIE25120.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 567
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 163/383 (42%), Gaps = 59/383 (15%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
+ +LK + GS+ C I + Q WG D LG E +P +A
Sbjct: 87 RDFLKSPLVCGSR---CTVAIDADGQ---VLSWGWNDRATLGHSHREHERKPRRVAALRG 140
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLR-ISGLKKEVVQIS 129
+ ++ GG H L L G VYA G N++GQ + N+ ++P + GL+ V Q++
Sbjct: 141 MEITQVSTGGWHCLALDSAGLVYAWGGNEYGQCNVEWNVRDVVQPTPCVPGLR--VKQVA 198
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G HS +T GE++ WG+ G + KV P KVE I + A G +
Sbjct: 199 AGGMHSCVLTDTGEVWTWGEP------WGDFSMKVDRHPKKVE--GAIDIVKLACGAFHN 250
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A+ G+VL+WG G+LG+G + E +P + LE V+V AG H
Sbjct: 251 LALNAAGEVLAWGINDFGQLGNGS---------TFYETSPTKVLGLEDVRVADIVAGGWH 301
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
S + G G H + +G ++ WG E G LG+G
Sbjct: 302 SLALTTEG-----------------GAHPQIECAKAGKMVFVWGRGEYGRLGLGDRSG-S 343
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
S R G + P SCG HT + SEG+I TWG G+F G+LG G
Sbjct: 344 SKLRATGVAFKEP--DASCGGTHTMVLTSEGRIYTWG----RGSF--------GRLGTGT 389
Query: 369 DVDYIHPTIVNFGENVKALQVSC 391
+ DY+ P V + +V C
Sbjct: 390 EKDYLSPVEVFLPGGPERWRVIC 412
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 116/272 (42%), Gaps = 37/272 (13%)
Query: 92 VYATGLNDFGQLGI--SENIGYS--LEPL---RISGLKKEVVQISTGYHHSSAITVDGEL 144
V+ G+N+ GQL + +EN+ LE L R G + G + AI DG++
Sbjct: 51 VFGWGVNEDGQLALDEAENVMAPKVLEALLGTRFQGRDFLKSPLVCGSRCTVAIDADGQV 110
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
WG N LG + + P +V L G+ Q + G +A+ G V +WG
Sbjct: 111 LSWGWNDRATLGHSHREHER--KPRRVAALRGMEITQVSTGGWHCLALDSAGLVYAWGGN 168
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG- 263
G + ++ +R + TP + G++VK AAG +HS + + G V+ +G
Sbjct: 169 EYG------QCNVEWNVRDVVQPTPC----VPGLRVKQVAAGGMHSCVLTDTGEVWTWGE 218
Query: 264 ---------DR-------AVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDV 307
DR A+D + G +L + GE+ WG N+ G LG GS
Sbjct: 219 PWGDFSMKVDRHPKKVEGAIDIVKLACGAF-HNLALNAAGEVLAWGINDFGQLGNGSTFY 277
Query: 308 LHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
SP +V G D V+ GW A +EG
Sbjct: 278 ETSPTKVLGLEDVRVADIVAGGWHSLALTTEG 309
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 118/289 (40%), Gaps = 59/289 (20%)
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI------FTKQAAL-GFEQSVAV 192
++ ++ WG N +GQL L + A+ + P +E L G F K + G +VA+
Sbjct: 47 IEAVVFGWGVNEDGQLALDE--AENVMAPKVLEALLGTRFQGRDFLKSPLVCGSRCTVAI 104
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
G+VLSWG LGH E PR + L G+++ + G H
Sbjct: 105 DADGQVLSWGWNDRATLGHSHRE---------HERKPRRVAALRGMEITQVSTGGWHCLA 155
Query: 253 IDENGRVYIFGDR-------------AVDKMLFQEGNHARRPS--------LISGGELYT 291
+D G VY +G V G ++ + L GE++T
Sbjct: 156 LDSAGLVYAWGGNEYGQCNVEWNVRDVVQPTPCVPGLRVKQVAAGGMHSCVLTDTGEVWT 215
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 350
WG G S+ V P++V+G + +++CG H A+ + G++L W
Sbjct: 216 WGEP----WGDFSMKVDRHPKKVEGAID---IVKLACGAFHNLALNAAGEVLAW------ 262
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G + GQLG+G+ PT V E+V+ + G H+ AL
Sbjct: 263 ------GINDFGQLGNGSTFYETSPTKVLGLEDVRVADIVAGGWHSLAL 305
>gi|357166808|ref|XP_003580861.1| PREDICTED: uncharacterized protein LOC100835494 [Brachypodium
distachyon]
Length = 1068
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 148/334 (44%), Gaps = 50/334 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ S ++P + + +++ +ACG HT +T TG +Y G ++
Sbjct: 286 WGEECSGRLGHGAGTSIFQPRLLESLSICNVEIIACGEFHTCAVTATGDLYTWGDGTHNA 345
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R+SG + +V +S G H++ IT G+LY +G + G LG G
Sbjct: 346 GLLGHGSTVSHWI-PKRVSGPLEGLQVSTVSCGTWHTALITSSGQLYTFGDGTFGALGHG 404
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---------GGGKVLSWGAGGSGRL 209
+ + I P +VE L G+ T + G S AV GK+ +WG G RL
Sbjct: 405 NR--ETISYPKEVESLKGLRTISVSCGVWHSAAVVEVIMTQSNASSGKLFTWGDGDKYRL 462
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S+ L P + L +A G + + +G ++ G +V
Sbjct: 463 GHGDRSAKL---------KPTCVPSLIDYNFHKSACGHTLTIGLTTSGHMFTVGS-SVYG 512
Query: 270 MLFQEGNHARRPSLI-----------------------SGGELYTWGSNENGCLGIGSID 306
L N R P L+ + GE+YTWG NG LG G I
Sbjct: 513 QLGNPNNDGRYPRLVEDKVGGGGVVEVACGSYHVAVLTNTGEVYTWGKGANGRLGHGDIA 572
Query: 307 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
P V+ + V +++CG TAAIS+ K
Sbjct: 573 DRKVPTLVEA-LRDRSVKRIACGSSFTAAISQHK 605
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 119/272 (43%), Gaps = 60/272 (22%)
Query: 142 GELYMWGK---------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
G++Y+WG+ S+G + G A I +P +E + A G + + +
Sbjct: 219 GDVYVWGEVMCDTTSRSGSDGNVH-GPGATTDILVPKPLESNVMLDVSYVACGVKHAALI 277
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T +V +WG SGRLGHG +SI + PRL++ L V+I A G H+
Sbjct: 278 TRQAEVFTWGEECSGRLGHGAGTSI---------FQPRLLESLSICNVEIIACGEFHTCA 328
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ G +Y +GD G++ G LG GS P+
Sbjct: 329 VTATGDLYTWGD----------------------------GTHNAGLLGHGSTVSHWIPK 360
Query: 313 RVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
RV GP V VSCG HTA I S G++ T+G GTF G LGHGN
Sbjct: 361 RVSGPLEGLQVSTVSCGTWHTALITSSGQLYTFG----DGTF--------GALGHGNRET 408
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
+P V + ++ + VSCG H+ A++E +
Sbjct: 409 ISYPKEVESLKGLRTISVSCGVWHSAAVVEVI 440
>gi|255551398|ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223544118|gb|EEF45643.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 393
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 148/368 (40%), Gaps = 66/368 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG+G E + V +A E + ++++ G ++L + + G ++ G N G
Sbjct: 10 WGAGEDGQLGIGINEEKEWVCVVNALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQRGT 69
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
LG P ++ L +VQ + G H A+ G Y WG N GQ G
Sbjct: 70 LGHPAETKTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 129
Query: 157 ---LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
GK + I IP + C + +Q A G SV +T G V +WG
Sbjct: 130 KDDTGKTLRRDIVIPQR--CAPKLVVRQVAAGGTHSVVLTREGHVWTWG----------- 176
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
+ G ++ S P ++ LE KVK+ A G H+ + E+
Sbjct: 177 QPWPPGDIKQIS--VPVRVQGLE--KVKLIAVGAFHNLALQED----------------- 215
Query: 274 EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 333
G L+ WG+NE G LG G P VQG + VD + GW T
Sbjct: 216 -------------GTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHST 262
Query: 334 AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 393
A +G++ WG G HG G + + P VN +Q+SCG
Sbjct: 263 ALTDDGEVYGWG-RGEHGRLG---------FGDNDKSSKMVPQKVNLLAGEDIVQLSCGG 312
Query: 394 NHTGALLE 401
H+ AL +
Sbjct: 313 THSVALTQ 320
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 135/310 (43%), Gaps = 40/310 (12%)
Query: 40 AALWGNGDYGRLG--------LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
A WG +YG+ G G R + K ++ +A GG H++ LT G
Sbjct: 112 AYAWGGNEYGQCGEEPERKDDTGKTLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGH 171
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ +GQ +I P+R+ GL+K V I+ G H+ A+ DG L+ WG N
Sbjct: 172 VWT-----WGQPWPPGDIKQISVPVRVQGLEK-VKLIAVGAFHNLALQEDGTLWAWGNNE 225
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
GQLG G + PIP V+ LSG+ A G S A+T G+V WG G GRLG
Sbjct: 226 YGQLGTGDTQPRSQPIP--VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGF 283
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G +S+ P+ + L G + + G HS + ++GR++ FG
Sbjct: 284 GDNDK-------SSKMVPQKVNLLAGEDIVQLSCGGTHSVALTQDGRMFSFG-------- 328
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 331
G+H R + G+ T G I L E +G + V+CG +
Sbjct: 329 --RGDHGR----LGYGKKVTTGQPVEVPTDIPPPKSLSGTEEAEGHWI---AKLVACGGR 379
Query: 332 HTAAISEGKI 341
HT AI E K+
Sbjct: 380 HTLAIVEWKV 389
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 107/290 (36%), Gaps = 62/290 (21%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
L WG +GQLG+G K V L + G S+A+ GK+ +WG
Sbjct: 7 LIAWGAGEDGQLGIGINEEK--EWVCVVNALEPYKVRSVVAGSRNSLAICDDGKLFTWGW 64
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G LGH E+ +E P +K L V + AA G H +D+ GR Y +G
Sbjct: 65 NQRGTLGHPAETK--------TENIPSQVKALNNVNIVQAAIGGWHCLAVDDQGRAYAWG 116
Query: 264 ----------------------------DRAVDKMLFQE----GNHARRPSLISGGELYT 291
R K++ ++ G H+ L G ++T
Sbjct: 117 GNEYGQCGEEPERKDDTGKTLRRDIVIPQRCAPKLVVRQVAAGGTHSV--VLTREGHVWT 174
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHG 351
WG G I + P RVQG V ++ G H A+ E L W W
Sbjct: 175 WGQP----WPPGDIKQISVPVRVQG---LEKVKLIAVGAFHNLALQEDGTL-WAW----- 221
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G++ GQLG G+ P V + + ++ G H+ AL +
Sbjct: 222 -----GNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTD 266
>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 396
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 148/365 (40%), Gaps = 65/365 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LGLG+ E + V A E +++++ G ++L + + G ++ G N G
Sbjct: 10 WGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGT 69
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
LG P + L ++VQ + G H A+ G Y WG N GQ G
Sbjct: 70 LGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSK 129
Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
G+ + I IP + C + +Q A G SV +T G V +WG +
Sbjct: 130 DETGRPVRRDIVIPKR--CAQQLTVRQVAAGGTHSVVLTREGYVWTWG-----------Q 176
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
G ++ S P ++ LE V++ A G H+ + E+
Sbjct: 177 PWPPGDIKQIS--VPVRVQGLE--NVRLIAVGAFHNLALKED------------------ 214
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
G L+ WG+NE G LG G P VQG + VD + GW TA
Sbjct: 215 ------------GTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTA 262
Query: 335 AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
+EG++ WG G HG G + + P VN +QVSCG
Sbjct: 263 LTNEGEVYGWG-RGEHGRLG---------FGDNDKSSKMLPQKVNLLAGEDIIQVSCGGT 312
Query: 395 HTGAL 399
H+ AL
Sbjct: 313 HSVAL 317
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 135/310 (43%), Gaps = 41/310 (13%)
Query: 40 AALWGNGDYGRLGL-GSLESRWRPVVCSAF------EKHSLKALACGGAHTLFLTETGCV 92
A WG +YG+ G S + RPV ++ +++ +A GG H++ LT G V
Sbjct: 112 AYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYV 171
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
+ +GQ +I P+R+ GL+ V I+ G H+ A+ DG L+ WG N
Sbjct: 172 WT-----WGQPWPPGDIKQISVPVRVQGLEN-VRLIAVGAFHNLALKEDGTLWAWGNNEY 225
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG G + PIP V+ L + A G S A+T G+V WG G GRLG G
Sbjct: 226 GQLGTGDTQPRSYPIP--VQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFG 283
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
+S+ P+ + L G + + G HS + +GR++ FG
Sbjct: 284 DNDK-------SSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFG--------- 327
Query: 273 QEGNHARRPSLISGGELYTWGSNENGCLGIGSID--VLHSPERVQGPFSESPVDQVSCGW 330
G+H R + G T G + I + H+ E G + V+CG
Sbjct: 328 -RGDHGR----LGYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWI---AKHVACGG 379
Query: 331 KHTAAISEGK 340
+HT AI E K
Sbjct: 380 RHTLAIVEWK 389
>gi|403303318|ref|XP_003942281.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Saimiri
boliviensis boliviensis]
Length = 531
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 139/300 (46%), Gaps = 47/300 (15%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P P
Sbjct: 114 QGVAPIQVCTNLLIKKVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKVTNCLHFKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
TP V++AA LHS C+++ + G +A +L G
Sbjct: 223 TP----------VRVAA---LHSVCVNQ----IVCG-------------YAHTLALTDEG 252
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 345
LY WG+N G LG G+ + L +P + E V+ +C HT+A G + WG
Sbjct: 253 LLYAWGANTYGQLGTGNKNNLLNPAHIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGVAPIQVCTNLLIKKVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHFKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLN 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 138/312 (44%), Gaps = 51/312 (16%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T D E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSANEALYVTDDDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 GLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGVAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK KV A G HS + +G V+ +G ++ G+ A +P+
Sbjct: 127 IK-----KVVEVACGSHHSMALAADGEVFAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV S V+Q+
Sbjct: 180 FKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG ++ GQLG GN + ++P + +
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLNPAHIMVEKERVV 287
Query: 387 LQVSCGFNHTGA 398
+C HT A
Sbjct: 288 EIAACHSAHTSA 299
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLNPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T + C +F
Sbjct: 317 -SVILPHLTHLSCTDDVF 333
>gi|345325115|ref|XP_001514077.2| PREDICTED: RCC1 and BTB domain-containing protein 2
[Ornithorhynchus anatinus]
Length = 721
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 139/311 (44%), Gaps = 51/311 (16%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
+ G G LG G +++ P + + L+ G G H + T G VY G N +
Sbjct: 239 VLGTNCSGCLGTGDVQNTIEPRRIDSLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAY 298
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG + + L P +S + K+VV+++ G HHS +T DGE+Y WG N++GQ+G G
Sbjct: 299 SQLG-NGTTNHGLIPCHVSTNLVNKKVVEVACGSHHSLVLTSDGEVYAWGYNNSGQVGSG 357
Query: 159 KKAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
A + PIP +V CL A G S+AV G+V WG G+G+LG G
Sbjct: 358 STANQ--PIPRRVTSCLQNKIATNIACGQMCSMAVVESGEVYVWGYNGNGQLGLGS---- 411
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S ++ TP I L+G++V+ G+ H+ + +
Sbjct: 412 -----SGNQPTPCRIAALQGIRVQRVTCGYAHTLVLTDE--------------------- 445
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV-SCGWKHTAA- 335
G+LY WG+N G LG G+ P + P + + ++ +C HT+A
Sbjct: 446 ---------GQLYAWGANSYGQLGTGNKSNQSYP--IPVPVEKDRIIEIAACHSAHTSAA 494
Query: 336 -ISEGKILTWG 345
G + WG
Sbjct: 495 KTQSGHVYMWG 505
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 146/347 (42%), Gaps = 60/347 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ TE V+ G N G LG + + ++E
Sbjct: 200 KWPIFALCSPEELKLIRQACVFGSAGNEVLYATENDEVFVLGTNCSGCLGTGD-VQNTIE 258
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P RI L K++ +S G H T +GE+Y WG N+ QLG G +IP
Sbjct: 259 PRRIDSLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLGNGTTNHGLIPCHVSTN 318
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
++ + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 319 LVNKKVV-EVACGSHHSLVLTSDGEVYAWGYNNSGQVGSGS---------TANQPIPRRV 368
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW 292
++C+ I + A +M +++ GE+Y W
Sbjct: 369 -----------------TSCLQNK----IATNIACGQMCSM--------AVVESGEVYVW 399
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 351
G N NG LG+GS +P R+ V +V+CG+ HT ++ EG++ W
Sbjct: 400 GYNGNGQLGLGSSGNQPTPCRIAA-LQGIRVQRVTCGYAHTLVLTDEGQLYAW------- 451
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G +S GQLG GN + +P V ++ +C HT A
Sbjct: 452 -----GANSYGQLGTGNKSNQSYPIPVPVEKDRIIEIAACHSAHTSA 493
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ + CG AHTL LT+ G +YA G N +G
Sbjct: 398 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVTCGYAHTLVLTDEGQLYAWGANSYG 457
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P+ + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 458 QLGTGNKSNQSY-PIPVPVEKDRIIEIAACHSAHTSAAKTQSGHVYMWGQ-CRGQ----- 510
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ +P T C +F
Sbjct: 511 --SVTLPHLTHFSCTDDVF 527
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 104/267 (38%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
T + E+++ G N +G LG G + P +++ L G K L + V T
Sbjct: 232 TENDEVFVLGTNCSGCLGTGDVQNTIEP--RRIDSLCG--KKITCLSYGSGPHVVVATAE 287
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + E+ A G HS
Sbjct: 288 GEVYTWGHNAYSQLGNGTTNHGLIPCHVSTNLVNKKVVEV--------ACGSHHSL---- 335
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE+Y WG N +G +G GS P RV
Sbjct: 336 --------------------------VLTSDGEVYAWGYNNSGQVGSGSTANQPIPRRVT 369
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
++CG + A+ E G++ WG+ G+ GQLG G+ +
Sbjct: 370 SCLQNKIATNIACGQMCSMAVVESGEVYVWGYNGN------------GQLGLGSSGNQPT 417
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P + + ++ +V+CG+ HT L +
Sbjct: 418 PCRIAALQGIRVQRVTCGYAHTLVLTD 444
>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
Length = 4837
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 132/299 (44%), Gaps = 48/299 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ +S RP + A + +ACG AH+ +T G V G +G+
Sbjct: 4048 WGEGEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGR 4107
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4108 LGHGDSED-QLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4165
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ IP K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4166 -GSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHV-- 4222
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P+ + L+G K+ A G LH AC D
Sbjct: 4223 -------RRPKKVAALQGKKIISIATGSLHCVACSD------------------------ 4251
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
GE++TWG N+ G LG G++ + P VQ + +V CG HT A+S
Sbjct: 4252 -------SGEVFTWGDNDEGQLGDGTVTAIQRPRLVQS-LQGKHIVKVICGSAHTLALS 4302
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 174/390 (44%), Gaps = 57/390 (14%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A +A GG TL+ +T G +YATG
Sbjct: 3942 WGHNHRGQLG-GLDGSRIKMPTPCEALSLLRPIQIA-GGEQTLYAVTPDGKLYATGYGAG 3999
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LGI S P + L+ +++ +++G H A++ DGE++ WG+ +G+LG
Sbjct: 4000 GRLGIGGTDSVS-APTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH 4058
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P +E LSGI A G S +T G VL+WG G GRLGHG
Sbjct: 4059 GNRDS--YDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGD---- 4112
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4113 -----SEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4167
Query: 276 NHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + P +L G +YTWG + LG G+ D + P++
Sbjct: 4168 DGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKK 4227
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V + ++ G H A S+ G++ TW G + GQLG G
Sbjct: 4228 VAA-LQGKKIISIATGSLHCVACSDSGEVFTW------------GDNDEGQLGDGTVTAI 4274
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGALLEY 402
P +V + ++V CG HT AL Y
Sbjct: 4275 QRPRLVQSLQGKHIVKVICGSAHTLALSTY 4304
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3003 WGEGEDGKLGHGNRLTLEKPKLIESLRTKRVRDIACGSSHSAAITSSGELYTWGLGEYGR 3062
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA--ITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L+ VVQ++ G + +T +G ++ WG G+LG G
Sbjct: 3063 LGHGDNCT-QLKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRG- 3120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ +P +VE L+ + Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3121 -GSEGCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHV-- 3177
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P I+ L G KV A G LH + ++G+V
Sbjct: 3178 -------RKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQV-------------------- 3210
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
Y WG N++G G G+ V P V G V++V+CG H+ A
Sbjct: 3211 ----------YAWGDNDHGQQGSGNTVVNKKPNLVLG-LDGVFVNRVACGSSHSVA 3255
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 179/389 (46%), Gaps = 61/389 (15%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-TETGCVYATGLN 98
+WG D +LG G S+ + P S + LK + GG+ +LF+ ++ G +YA G
Sbjct: 2896 VWGLNDKEQLG-GLKGSKVKLPTYSSVLSQ--LKPIHIAGGSKSLFIVSQDGKLYACGEG 2952
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LG+ N P ++ L + VV+ + +G H+ A+T+DG+++ WG+ +G+L
Sbjct: 2953 TNGRLGLGHNNNVP-TPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3011
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + + P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 3012 GHGNRLT--LEKPKLIESLRTKRVRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD-- 3067
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGD--------- 264
+ ++ P+L+ L+G +V A G + C+ E G V+ +GD
Sbjct: 3068 -------NCTQLKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRG 3120
Query: 265 --------------RAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHS 310
+V M + G +L GE++TWG + LG G+ +
Sbjct: 3121 GSEGCSVPHQVERLNSVGVMQIECGAQFSL-ALTKSGEVWTWGKGDYYRLGHGTDQHVRK 3179
Query: 311 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 369
P +QG V V+ G H A+++ G++ WG ++ H GQ G GN
Sbjct: 3180 PTPIQG-LRGKKVIHVAVGALHCLAVTDSGQVYAWG---------DNDH---GQQGSGNT 3226
Query: 370 VDYIHPTIVNFGENVKALQVSCGFNHTGA 398
V P +V + V +V+CG +H+ A
Sbjct: 3227 VVNKKPNLVLGLDGVFVNRVACGSSHSVA 3255
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 140/323 (43%), Gaps = 58/323 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD GRLG G S+ P + + + + CG +++ +T G ++ G +G+
Sbjct: 592 WGAGDGGRLGHGDTVSKEHPTMIVGLHEKQVCGIYCGASYSAAITIAGELFTWGRGTYGR 651
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG N L P ++ LK +VV ++ +G HS +T +G L+ WG G+LG G
Sbjct: 652 LG-HGNSDDKLVPTQVQALKSYKVVDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGS 710
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
PIP +++ L + + G + SVA++ G + +WG G GRLGHG
Sbjct: 711 CNGS--PIPVQIDTLVNV--SRIYSGSQFSVALSCDGTLYTWGKGHGGRLGHGN------ 760
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P+L++ LEG K+ A G H C+
Sbjct: 761 ---SEHSNVPKLVRALEGKKIADVAVGSAH--CL-------------------------- 789
Query: 280 RPSLISGGELYTWGSNENGCL---GIGSIDVLHSPERVQGPFSESPVDQVSCG------W 330
+L S GELY WG N+ + G+ ++HSP P + ++CG W
Sbjct: 790 --ALTSSGELYGWGRNDYQQICPSGVSRDPIIHSPILTTPPTLR--ISGMTCGAAQSIVW 845
Query: 331 KHTAAISEGKILTWGWGGSHGTF 353
H++ + + + S TF
Sbjct: 846 CHSSTLGVASKIPFVVDLSEHTF 868
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 54/266 (20%)
Query: 129 STGYHHSSAIT-VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
S+ Y ++ + ++ +WG N QLG G K +KV +PT LS + A G +
Sbjct: 2878 SSNYADDQSLNEISSKVLVWGLNDKEQLG-GLKGSKV-KLPTYSSVLSQLKPIHIAGGSK 2935
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
V+ GK+ + G G +GRLG G +++ TPR + L VK A
Sbjct: 2936 SLFIVSQDGKLYACGEGTNGRLGLGHNNNV---------PTPRQVPILNQYVVKKVA--- 2983
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDV 307
+HS G HA +L G++++WG E+G LG G+
Sbjct: 2984 VHSG-----------------------GKHAM--ALTLDGKVFSWGEGEDGKLGHGNRLT 3018
Query: 308 LHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGH 366
L P+ ++ V ++CG H+AAI S G++ TWG G G+LGH
Sbjct: 3019 LEKPKLIES-LRTKRVRDIACGSSHSAAITSSGELYTWGLG------------EYGRLGH 3065
Query: 367 GNDVDYIHPTIVNFGENVKALQVSCG 392
G++ + P +V + + +QV+CG
Sbjct: 3066 GDNCTQLKPKLVTTLQGHRVVQVACG 3091
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 134/336 (39%), Gaps = 78/336 (23%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTG 131
++ +AC + LT G V++ N SENI P GL+ VVQI+
Sbjct: 525 VRQVACTENNIYILTTGGQVFSLHSNS------SENIA----PKAFEGLEGVHVVQIAAH 574
Query: 132 YH--HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA---LGF 186
H ++ E++ WG G+LG G +K P + G+ KQ G
Sbjct: 575 CEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPT-----MIVGLHEKQVCGIYCGA 629
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA-- 244
S A+T G++ +WG G GRLGHG S + P ++ L+ KV A
Sbjct: 630 SYSAAITIAGELFTWGRGTYGRLGHGN---------SDDKLVPTQVQALKSYKVVDVALG 680
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGS 304
+G HS C+ +NG L+ WG + G LG GS
Sbjct: 681 SGDAHSMCVTDNGL------------------------------LFAWGDGDFGKLGNGS 710
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ P ++ + V ++ G + + A+S +G + TWG G GG+
Sbjct: 711 CNGSPIPVQIDTLVN---VSRIYSGSQFSVALSCDGTLYTWGKG------------HGGR 755
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LGHGN P +V E K V+ G H AL
Sbjct: 756 LGHGNSEHSNVPKLVRALEGKKIADVAVGSAHCLAL 791
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 112/250 (44%), Gaps = 53/250 (21%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++ WG N GQLG G ++ I +PT E LS + Q A G + AVT GK+ + G
Sbjct: 3939 IFGWGHNHRGQLG-GLDGSR-IKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGY 3996
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G GRLG G S+ P L++ L+ V +K A C+
Sbjct: 3997 GAGGRLGIGGTDSV---------SAPTLVESLQHVIIKKVAVNSGGKHCL---------- 4037
Query: 264 DRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
+L S GE+++WG E+G LG G+ D P+ ++ S V
Sbjct: 4038 ------------------ALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEA-LSGIGV 4078
Query: 324 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 382
++CG H+A I S+G +LTWG G G+LGHG+ D + P +V
Sbjct: 4079 IDIACGSAHSACITSQGHVLTWGKG------------RYGRLGHGDSEDQLQPKLVEALL 4126
Query: 383 NVKALQVSCG 392
+A+ ++CG
Sbjct: 4127 GYRAIDIACG 4136
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 16/116 (13%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC--GWKHTAAIS-EGKILT 343
G+LY G NG LG+G + + +P +V ++ V +V+ G KH A++ +GK+ +
Sbjct: 2944 GKLYACGEGTNGRLGLGHNNNVPTPRQVP-ILNQYVVKKVAVHSGGKHAMALTLDGKVFS 3002
Query: 344 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
WG G EDG +LGHGN + P ++ + ++CG +H+ A+
Sbjct: 3003 WGEG-------EDG-----KLGHGNRLTLEKPKLIESLRTKRVRDIACGSSHSAAI 3046
>gi|114321835|ref|YP_743518.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
gi|114228229|gb|ABI58028.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
Length = 818
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 173/414 (41%), Gaps = 80/414 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGLG + P + K ++ G H+L + G ++A G N++GQ
Sbjct: 245 WGRNNAGQLGLGDTNHHYTPTQVGT-DTDWAKKISAGRRHSLAVKADGSLWAWGDNEYGQ 303
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ + P ++ G + IS G HS A+ DG L+ WG N +GQLGLG A
Sbjct: 304 LGLGD-TDERHAPEQV-GSNTDWAAISAGRRHSLAVKADGSLWSWGYNDSGQLGLGDTAD 361
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS------ 216
+ P + + + G E S+AV G ++ WG G+LG G S
Sbjct: 362 RNAPEQVGADTDWDLVSA----GGEHSLAVKADGTLMVWGLNHLGQLGLGDTVSRDAPVP 417
Query: 217 ------------------ILGFLRS--TSEY-------TPRLIKELEGVKVKIAAA---- 245
G LR+ +EY ++ + V AA
Sbjct: 418 IASGIALVAGRNHTVAVNPDGTLRAWGDNEYGQLGLGVMRYIVTPSQTVTGSAWAAVNGG 477
Query: 246 GFLHSACIDENGRVYIFG-------------DRAVDKML-----FQEGNHARRPSLI--S 285
F HS + ++G ++ +G DRA + + + N A +L +
Sbjct: 478 SFNHSLGLRDDGTLWAWGRNNYGQLGLGDTDDRATPEQVGSHTDWAAVNAASYHTLAVKN 537
Query: 286 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 345
G L+ WG N +G LG+ + H+PERV S++ VS G HT+A+ L W
Sbjct: 538 DGTLWAWGRNSSGQLGLSDTNDRHTPERVG---SDTDWATVSVGQSHTSAVKPDGTL-WA 593
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
WG +H GQLG G+ D + P V G L VS G +HT A+
Sbjct: 594 WGWNH----------YGQLGLGDTSDRLSPEQV--GGESNWLAVSTGLHHTVAV 635
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 149/359 (41%), Gaps = 67/359 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +YG+LGLG + R P + A+ HTL + G ++A G N GQ
Sbjct: 494 WGRNNYGQLGLGDTDDRATPEQVGSHTD--WAAVNAASYHTLAVKNDGTLWAWGRNSSGQ 551
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+S+ P R+ G + +S G H+SA+ DG L+ WG N GQLGLG +
Sbjct: 552 LGLSD-TNDRHTPERV-GSDTDWATVSVGQSHTSAVKPDGTLWAWGWNHYGQLGLGDTSD 609
Query: 163 KVIPIPTKVECLSGIFTKQA-ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ P E + G A + G +VAV G + +WG G+LG G S +
Sbjct: 610 RLSP-----EQVGGESNWLAVSTGLHHTVAVKTDGTLWAWGWNVRGQLGLGHTSDRHAPV 664
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ S+ ++A+G+ R
Sbjct: 665 QVGSDTD----------WAAVSASGY-------------------------------RTL 683
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 341
++ + G L+ WG N NG LG+G D ++P +V +++ VS G HT A E
Sbjct: 684 AVKADGTLWAWGENNNGQLGLGDTDNRNTPAQVG---NDADWAAVSTGLFHTLAFKEDDT 740
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
L W WG +H GQLG G+ + P V G VS G HT A +
Sbjct: 741 L-WAWGRNH----------DGQLGLGDTDNRDAP--VQVGNETDWSTVSGGGYHTLATM 786
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 172/450 (38%), Gaps = 91/450 (20%)
Query: 16 QDIKLGSKLGICKRWISSTLQRRFA-------ALWGNGDYGRLGLGSLESRWRPVVCSAF 68
D + ++G W + + R LW G GR+GLG R P
Sbjct: 161 DDRDVPEQVGTDSDWTAVSAGRDHTVAVKANGTLWAWGRSGRIGLGDSGDRDEPEQVGV- 219
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI 128
+ AL+ GG+HT+ + G ++A G N+ GQLG+ + + P ++ +I
Sbjct: 220 -DNDWIALSAGGSHTVAVKADGTLWAWGRNNAGQLGLGD-TNHHYTPTQVGTDTDWAKKI 277
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GF 186
S G HS A+ DG L+ WG N GQLGLG + P G T AA+ G
Sbjct: 278 SAGRRHSLAVKADGSLWAWGDNEYGQLGLGDTDERHAPEQV------GSNTDWAAISAGR 331
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK---------ELEG 237
S+AV G + SWG SG+LG G + + ++ L+ + +G
Sbjct: 332 RHSLAVKADGSLWSWGYNDSGQLGLGDTADRNAPEQVGADTDWDLVSAGGEHSLAVKADG 391
Query: 238 V----------------------KVKIAA-----AGFLHSACIDENGRVYIFGDRAVDKM 270
V IA+ AG H+ ++ +G + +GD ++
Sbjct: 392 TLMVWGLNHLGQLGLGDTVSRDAPVPIASGIALVAGRNHTVAVNPDGTLRAWGDNEYGQL 451
Query: 271 LFQEGNHARRPS---------------------LISGGELYTWGSNENGCLGIGSIDVLH 309
+ PS L G L+ WG N G LG+G D
Sbjct: 452 GLGVMRYIVTPSQTVTGSAWAAVNGGSFNHSLGLRDDGTLWAWGRNNYGQLGLGDTDDRA 511
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 369
+PE+V + V+ S HT A+ L W W G +S GQLG +
Sbjct: 512 TPEQVGSHTDWAAVNAASY---HTLAVKNDGTL-WAW----------GRNSSGQLGLSDT 557
Query: 370 VDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
D P V G + VS G +HT A+
Sbjct: 558 NDRHTPERV--GSDTDWATVSVGQSHTSAV 585
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 156/360 (43%), Gaps = 75/360 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YGRLGLG + R V A++ G HT+ + G ++A G + G+
Sbjct: 147 WGRNGYGRLGLGDTDDR--DVPEQVGTDSDWTAVSAGRDHTVAVKANGTLWAWGRS--GR 202
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+G+ ++ G EP ++ G+ + + +S G H+ A+ DG L+ WG+N+ GQLGLG
Sbjct: 203 IGLGDS-GDRDEPEQV-GVDNDWIALSAGGSHTVAVKADGTLWAWGRNNAGQLGLGDTNH 260
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P + + K+ + G S+AV G + +WG G+LG L
Sbjct: 261 HYTPTQVGTDT---DWAKKISAGRRHSLAVKADGSLWAWGDNEYGQLG----------LG 307
Query: 223 STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T E R E G AA AG HS + +
Sbjct: 308 DTDE---RHAPEQVGSNTDWAAISAGRRHSLAVKAD------------------------ 340
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEG 339
G L++WG N++G LG+G ++PE+V +++ D VS G +H+ A+ ++G
Sbjct: 341 ------GSLWSWGYNDSGQLGLGDTADRNAPEQVG---ADTDWDLVSAGGEHSLAVKADG 391
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
++ W G + GQLG G+ V P + G + + G NHT A+
Sbjct: 392 TLMVW------------GLNHLGQLGLGDTVSRDAPVPIASG-----IALVAGRNHTVAV 434
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 133/306 (43%), Gaps = 57/306 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGL R P + ++ G +HT + G ++A G N +GQ
Sbjct: 544 WGRNSSGQLGLSDTNDRHTPERVGS--DTDWATVSVGQSHTSAVKPDGTLWAWGWNHYGQ 601
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ + L P ++ G + + +STG HH+ A+ DG L+ WG N GQLGLG +
Sbjct: 602 LGLGD-TSDRLSPEQVGG-ESNWLAVSTGLHHTVAVKTDGTLWAWGWNVRGQLGLGHTSD 659
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ + + +A G+ +++AV G + +WG +G+LG G
Sbjct: 660 RHAPVQVGSDT---DWAAVSASGY-RTLAVKADGTLWAWGENNNGQLGLGD--------- 706
Query: 223 STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ + TP + G AA G H+ + F+E +
Sbjct: 707 TDNRNTPAQV----GNDADWAAVSTGLFHT-------------------LAFKEDD---- 739
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEG 339
L+ WG N +G LG+G D +P +V +E+ VS G HT A +S+G
Sbjct: 740 -------TLWAWGRNHDGQLGLGDTDNRDAPVQVG---NETDWSTVSGGGYHTLATMSDG 789
Query: 340 KILTWG 345
+ WG
Sbjct: 790 TLRAWG 795
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 162/384 (42%), Gaps = 65/384 (16%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG SR PV + S AL G HT+ + G + A G N++G
Sbjct: 395 VWGLNHLGQLGLGDTVSRDAPVPIA-----SGIALVAGRNHTVAVNPDGTLRAWGDNEYG 449
Query: 102 QLGISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + Y + P + ++G V + ++HS + DG L+ WG+N+ GQLGLG
Sbjct: 450 QLGLGV-MRYIVTPSQTVTGSAWAAVNGGS-FNHSLGLRDDGTLWAWGRNNYGQLGLGDT 507
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P G T AA+ ++AV G + +WG SG+ L
Sbjct: 508 DDRATPEQV------GSHTDWAAVNAASYHTLAVKNDGTLWAWGRNSSGQ---------L 552
Query: 219 GFLRSTSEYTP-RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
G + +TP R+ + + V + G H++ + +G ++ +G ++ + +
Sbjct: 553 GLSDTNDRHTPERVGSDTDWATVSV---GQSHTSAVKPDGTLWAWGWNHYGQLGLGDTSD 609
Query: 278 ARRPSLISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
P + G G L+ WG N G LG+G H+P +V
Sbjct: 610 RLSPEQVGGESNWLAVSTGLHHTVAVKTDGTLWAWGWNVRGQLGLGHTSDRHAPVQVGSD 669
Query: 318 FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 377
+ V + G++ A ++G + W G ++ GQLG G+ + P
Sbjct: 670 TDWAAV--SASGYRTLAVKADGTLWAW------------GENNNGQLGLGDTDNRNTPAQ 715
Query: 378 VNFGENVKALQVSCGFNHTGALLE 401
V G + VS G HT A E
Sbjct: 716 V--GNDADWAAVSTGLFHTLAFKE 737
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 127/296 (42%), Gaps = 60/296 (20%)
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
++ G H+ A+ DG L+ WG+N G+LGLG + +P + +T +A G +
Sbjct: 128 LAAGDDHTVAVKADGTLWAWGRNGYGRLGLGDTDDRDVPEQVGTDS---DWTAVSA-GRD 183
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--A 245
+VAV G + +WG SGR+G G R E GV A A
Sbjct: 184 HTVAVKANGTLWAWGR--SGRIGLGDSGD-------------RDEPEQVGVDNDWIALSA 228
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI--------------------- 284
G H+ + +G ++ +G ++ + NH P+ +
Sbjct: 229 GGSHTVAVKADGTLWAWGRNNAGQLGLGDTNHHYTPTQVGTDTDWAKKISAGRRHSLAVK 288
Query: 285 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILT 343
+ G L+ WG NE G LG+G D H+PE+V S + +S G +H+ A+ ++G + +
Sbjct: 289 ADGSLWAWGDNEYGQLGLGDTDERHAPEQVG---SNTDWAAISAGRRHSLAVKADGSLWS 345
Query: 344 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
W G++ GQLG G+ D P V G + VS G H+ A+
Sbjct: 346 W------------GYNDSGQLGLGDTADRNAPEQV--GADTDWDLVSAGGEHSLAV 387
>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
Length = 1099
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 168/368 (45%), Gaps = 68/368 (18%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQ-IS 129
++ +ACGG H +T+ G V++ G G+L G+ ++ + P I L ++ ++
Sbjct: 307 VQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPH---PKLIESLSNTNIELVA 363
Query: 130 TGYHHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
G +H+ A+T+ G+LY WG + G LG G + + +P +V L GI + G
Sbjct: 364 CGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHW--VPKRVNGPLEGIHVSSISCGP 421
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+ VT G++ ++G G G LGHG S+ PR I+ L+G++ AA G
Sbjct: 422 WHTAVVTSSGQLFTFGDGTFGVLGHGDRKSV---------SLPREIESLKGLRTVQAACG 472
Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKM---------------LFQEGN--- 276
H+A + E +G+++ +GD ++ E N
Sbjct: 473 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRVVTLDEPNFCQ 532
Query: 277 ----HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 332
H+ +L G +YT GS G LG D P V+G S+S V++++CG H
Sbjct: 533 VACGHSMTVALSRLGHVYTMGSCVYGHLGNTQADG-KLPTPVEGKLSKSFVEEIACGAYH 591
Query: 333 TAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 391
A + S ++ TWG G + G LGHG+ D PT+V ++ + ++C
Sbjct: 592 VAVLTSRTEVFTWGKGAN------------GCLGHGDTNDRNTPTLVEALKDKQVKSIAC 639
Query: 392 GFNHTGAL 399
G N T A+
Sbjct: 640 GTNFTAAI 647
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 148/325 (45%), Gaps = 37/325 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + + +++ +ACG HT +T +G +Y G ++
Sbjct: 329 WGGESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNY 388
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G + G LG G
Sbjct: 389 GLLGHGNQVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHG 447
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ K + +P ++E L G+ T QAA G + AV GK+ +WG G
Sbjct: 448 DR--KSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 505
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH----SACI-------DE 255
GRLGHG + S L R + P + G + +A + H +C+
Sbjct: 506 GRLGHGDKESKLVPTRVVTLDEPNFCQVACGHSMTVALSRLGHVYTMGSCVYGHLGNTQA 565
Query: 256 NGRVYIFGDRAVDKMLFQE----GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSP 311
+G++ + + K +E H L S E++TWG NGCLG G + ++P
Sbjct: 566 DGKLPTPVEGKLSKSFVEEIACGAYHV--AVLTSRTEVFTWGKGANGCLGHGDTNDRNTP 623
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAI 336
V+ + V ++CG TAAI
Sbjct: 624 TLVEA-LKDKQVKSIACGTNFTAAI 647
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 103/238 (43%), Gaps = 50/238 (21%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G E + VT G+V SWG GRLGHG +S +
Sbjct: 295 LPKALESAVVLDVQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVP-------- 346
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
P+LI+ L +++ A G H+ + +G +Y +GD
Sbjct: 347 -HPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGD---------------------- 383
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 345
G+ G LG G+ P+RV GP V +SCG HTA + S G++ T+G
Sbjct: 384 ------GTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFG 437
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
GTF G LGHG+ P + + ++ +Q +CG HT A++E +
Sbjct: 438 ----DGTF--------GVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVM 483
>gi|192361760|ref|YP_001982981.1| IPT/TIG domain-containing protein [Cellvibrio japonicus Ueda107]
gi|190687925|gb|ACE85603.1| IPT/TIG domain protein [Cellvibrio japonicus Ueda107]
Length = 12743
Score = 106 bits (265), Expect = 2e-20, Method: Composition-based stats.
Identities = 100/360 (27%), Positives = 159/360 (44%), Gaps = 57/360 (15%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVC--SAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
WGN Y LG+ S+ R +P + SA + S+ +LA H L L + V+ G+N
Sbjct: 12218 WGNNGYASLGVSDTSIYQRSKPGLANISAIQPASIISLA-SYYHVLALDDKNRVWGWGMN 12276
Query: 99 DFGQLG--ISENIGYS-----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
GQLG +N Y+ L LR +++ IS GY HS A+ G ++ WG NS
Sbjct: 12277 WSGQLGDGTYDNNRYAPVKTDLSQLRSMEDSADIIAISAGYGHSLALDSLGRVWAWGSNS 12336
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+GQLG ++PI + L+G A ++A+ G++ +WG GRLG+
Sbjct: 12337 SGQLGTNNTQRSLVPILVDLSPLAGAKVVAAKATDYFNMALDESGQLWAWGDNRYGRLGN 12396
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G S L +T + L KV G H +D+ G+V+ +G+ + ++
Sbjct: 12397 GSSGSYLYLPTATDQ------SALSSNKVVDFDIGAYHVLALDDAGQVWAWGNNSYGQL- 12449
Query: 272 FQEGNHARRPSLI----------------------------SGGELYTWGSNENGCLGIG 303
GN + SL+ G ++TWG N+ G LG G
Sbjct: 12450 ---GNGSTANSLVPVKVNLSALEGVGVQSVEVGNRYSMLLDKLGRIWTWGYNDYGSLGTG 12506
Query: 304 SIDVLHSPERV-QGPFSESPVDQVSCGWK-HTAAISEG-KILTWGWGGSHGTFSEDGHSS 360
+ L++P + Q F+ + + + G H A+ E + TWG+GG + E G+ S
Sbjct: 12507 NRQSLYTPTLIDQSAFNGAVIHSIDAGNSFHNLAMDESNNVWTWGYGG----YGEMGNGS 12562
Score = 83.2 bits (204), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/163 (30%), Positives = 86/163 (52%), Gaps = 4/163 (2%)
Query: 18 IKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVC--SAFEKHSLKA 75
I++G L R+ + WG G LG+G+ + ++ PV+ SA + S+ A
Sbjct: 10933 IEVGKSLHAVGRYHTLLWANDILWAWGRNSNGELGIGNWQDQYAPVMTDISALDGASINA 10992
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLRISGLKK-EVVQISTGYH 133
LA G A +L L + G +++ GLN++GQLGI +S + + +S L +V I H
Sbjct: 10993 LAAGDAFSLALDDRGRLWSWGLNNYGQLGIGSTSAFSRPQEVDLSNLMGFRIVNIVAADH 11052
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
++ A+ +G ++ WG+N GQLG+ +++P+ + L G
Sbjct: 11053 YAFALDENGNVWSWGRNDLGQLGIALTGNQLVPMAVDLSVLGG 11095
Score = 82.0 bits (201), Expect = 4e-13, Method: Composition-based stats.
Identities = 73/290 (25%), Positives = 116/290 (40%), Gaps = 47/290 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVC--SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ G+LG + + P++ S + A + L E+G ++A G N +
Sbjct: 12332 WGSNSSGQLGTNNTQRSLVPILVDLSPLAGAKVVAAKATDYFNMALDESGQLWAWGDNRY 12391
Query: 101 GQLGISENIGYSLEPLRI--SGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG + Y P S L +VV G +H A+ G+++ WG NS GQLG
Sbjct: 12392 GRLGNGSSGSYLYLPTATDQSALSSNKVVDFDIGAYHVLALDDAGQVWAWGNNSYGQLGN 12451
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G A ++P+ + L G+ + +G S+ + G++ +WG G LG G S+
Sbjct: 12452 GSTANSLVPVKVNLSALEGVGVQSVEVGNRYSMLLDKLGRIWTWGYNDYGSLGTGNRQSL 12511
Query: 218 LGFLRSTSEYTPRLIKE--LEGVKV-KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
YTP LI + G + I A H+ +DE+ V+
Sbjct: 12512 ---------YTPTLIDQSAFNGAVIHSIDAGNSFHNLAMDESNNVW-------------- 12548
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 324
TWG G +G GS P V+ P +P +
Sbjct: 12549 ----------------TWGYGGYGEMGNGSYSNSLLPIPVRIPVPSTPFE 12582
Score = 62.0 bits (149), Expect = 6e-07, Method: Composition-based stats.
Identities = 82/336 (24%), Positives = 129/336 (38%), Gaps = 81/336 (24%)
Query: 111 YSLEPL---RISGLKKEVVQISTGY------------HHSSAITVDGELYMWGKNSNGQL 155
Y+LEPL IS E+V+ T + S + V L+ WG N L
Sbjct: 12167 YALEPLGHVEISNASMELVETKTLRCPRDDVKPFSVGSNFSLVAVGNTLWSWGNNGYASL 12226
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAA-----LGFEQSVAVTGGGKVLSWGAGGSGRLG 210
G+ + P L+ I Q A + +A+ +V WG SG+LG
Sbjct: 12227 GVSDTSIYQRSKPG----LANISAIQPASIISLASYYHVLALDDKNRVWGWGMNWSGQLG 12282
Query: 211 HGQESSILGFLRSTSEYTP-----RLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGD 264
G + + Y P ++ +E IA +AG+ HS +D GRV+ +G
Sbjct: 12283 DGTYDN--------NRYAPVKTDLSQLRSMEDSADIIAISAGYGHSLALDSLGRVWAWGS 12334
Query: 265 RAVDKMLFQEGNHARRPSLI------------------------SGGELYTWGSNENGCL 300
+ ++ + P L+ G+L+ WG N G L
Sbjct: 12335 NSSGQLGTNNTQRSLVPILVDLSPLAGAKVVAAKATDYFNMALDESGQLWAWGDNRYGRL 12394
Query: 301 GIGSI-DVLHSPERV-QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDG 357
G GS L+ P Q S + V G H A+ + G++ W WG
Sbjct: 12395 GNGSSGSYLYLPTATDQSALSSNKVVDFDIGAYHVLALDDAGQV--WAWG---------- 12442
Query: 358 HSSGGQLGHGNDVDYIHPTIVNF----GENVKALQV 389
++S GQLG+G+ + + P VN G V++++V
Sbjct: 12443 NNSYGQLGNGSTANSLVPVKVNLSALEGVGVQSVEV 12478
Score = 60.8 bits (146), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 121 LKKEVVQISTGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
+K V+++ H + + + + L+ WG+NSNG+LG+G + P+ T + L G
Sbjct: 10928 VKLHVIEVGKSLHAVGRYHTLLWANDILWAWGRNSNGELGIGNWQDQYAPVMTDISALDG 10987
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
A G S+A+ G++ SWG G+LG G S+ S + L
Sbjct: 10988 ASINALAAGDAFSLALDDRGRLWSWGLNNYGQLGIGSTSAF-------SRPQEVDLSNLM 11040
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFG 263
G ++ A ++ +DENG V+ +G
Sbjct: 11041 GFRIVNIVAADHYAFALDENGNVWSWG 11067
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 5/125 (4%)
Query: 94 ATGLNDFGQLGIS----ENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWG 148
ATG QL +S + Y +EP+ + L + +++T H+ AI G+L+ WG
Sbjct: 11310 ATGTQYHLQLSMSSIYKKQYAYKVEPVAYAQLDGVALSRVATNTAHNLAIDGQGKLWSWG 11369
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
KN+ GQLG G P+ + A+G + S+A+ G V SWG SG
Sbjct: 11370 KNTYGQLGNGSYDDITAPLTQDFSGKDNVGLASVAVGEQFSIAIDNLGDVWSWGFNNSGE 11429
Query: 209 LGHGQ 213
LG G
Sbjct: 11430 LGQGH 11434
Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 59/136 (43%), Gaps = 3/136 (2%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
A G HTL L ++A G N G+LGI Y+ IS L + ++ G
Sbjct: 10941 AVGRYHTL-LWANDILWAWGRNSNGELGIGNWQDQYAPVMTDISALDGASINALAAGDAF 10999
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G L+ WG N+ GQLG+G +A P + L G + A+
Sbjct: 11000 SLALDDRGRLWSWGLNNYGQLGIGSTSAFSRPQEVDLSNLMGFRIVNIVAADHYAFALDE 11059
Query: 195 GGKVLSWGAGGSGRLG 210
G V SWG G+LG
Sbjct: 11060 NGNVWSWGRNDLGQLG 11075
Score = 45.1 bits (105), Expect = 0.061, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 9/115 (7%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS--LEPLRIS 119
PV + + +L +A AH L + G +++ G N +GQLG N Y PL
Sbjct: 11335 PVAYAQLDGVALSRVATNTAHNLAIDGQGKLWSWGKNTYGQLG---NGSYDDITAPLTQD 11391
Query: 120 GLKKEVV---QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
K+ V ++ G S AI G+++ WG N++G+LG G + +PIP +
Sbjct: 11392 FSGKDNVGLASVAVGEQFSIAIDNLGDVWSWGFNNSGELGQG-HSDWAVPIPVSI 11445
Score = 43.1 bits (100), Expect = 0.22, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 6/135 (4%)
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H A+ G ++ WG+N GQLG G + P G A G S+A+
Sbjct: 11734 HYLALDHKGRVWAWGENYGGQLGNGTYDTPQVLQPIDPAAFHGAAIVAIAAGEGFSLALD 11793
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G++ +WG G+LG S+I RST P + L G ++K A +
Sbjct: 11794 DKGQLWAWGINDRGQLGVA--STI---YRSTIP-VPADMSALGGTRIKTLQAAGDQGYLL 11847
Query: 254 DENGRVYIFGDRAVD 268
DE GR++ +G R D
Sbjct: 11848 DELGRLWAWGARVGD 11862
Score = 40.0 bits (92), Expect = 2.0, Method: Composition-based stats.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 33/173 (19%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG G+LG G+ ++ +P+ +AF ++ A+A G +L L + G ++A G+ND
Sbjct: 11747 WGENYGGQLGNGTYDTPQVLQPIDPAAFHGAAIVAIAAGEGFSLALDDKGQLWAWGINDR 11806
Query: 101 GQLGISENIGYSLEPL-----RISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNG 153
GQLG++ I S P+ + G + + +Q + GY + G L+ WG
Sbjct: 11807 GQLGVASTIYRSTIPVPADMSALGGTRIKTLQAAGDQGY----LLDELGRLWAWGARVGD 11862
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
G+ ++A P +V+ +A GGK L AG +
Sbjct: 11863 WTGMDSESAYA---PVQVD-----------------LAEVSGGKALQMSAGNN 11895
Score = 38.9 bits (89), Expect = 5.0, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 58/136 (42%), Gaps = 14/136 (10%)
Query: 43 WGN--GDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGAHTLFLTETGCVYATGLN 98
WG GD+ G+ S ES + PV E KAL + G + L L E V+ G
Sbjct: 11856 WGARVGDW--TGMDS-ESAYAPVQVDLAEVSGGKALQMSAGNNYLLMLDENNQVWVLGNA 11912
Query: 99 DFGQLGISENIGYS------LEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNS 151
+ S G + L + +S L K + IS G HH + +G ++ WG N
Sbjct: 11913 NNYSASSSSADGENNSDNPFLNRVDLSSLGDKSAISISAGSHHDLLLDDEGGIWSWGYNY 11972
Query: 152 NGQLGLGKKAAKVIPI 167
NG+LG+ PI
Sbjct: 11973 NGELGVDGVYQTSTPI 11988
>gi|190610056|gb|ACE79739.1| At5g60870 [Arabidopsis thaliana]
Length = 376
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 138/303 (45%), Gaps = 40/303 (13%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG GD GRLG G S + P + FE+HS++ +A GG H++ LT G V+ G FG
Sbjct: 54 IWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFG 113
Query: 102 QLGISENIGYSLEPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + L P R+ ++ I+T H++AIT GELYMWG+
Sbjct: 114 ALG-HKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGP 172
Query: 161 AAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+ +P+KV+ L+ + GF ++A+T G++ +WGA + LG G
Sbjct: 173 GRGPNEGGGLSVPSKVKALTVPVASVSCGGF-FTMALTKEGQLWNWGANSNYELGRGD-- 229
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD----------- 264
+ + P + LEGV++ A G HS + E G+V +G
Sbjct: 230 -------NLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSL 282
Query: 265 -----------RAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGI-GSIDVLHSPE 312
A K++F + ++ GGEL+ WG+ ++ LG+ G ++ +P
Sbjct: 283 RNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPV 342
Query: 313 RVQ 315
V
Sbjct: 343 EVN 345
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 139/310 (44%), Gaps = 64/310 (20%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA--- 182
+ IS G HS +T+DG+L++WGK G+LG G++ + +P L+ +F + +
Sbjct: 35 IGISCGLFHS-GLTIDGDLWIWGKGDGGRLGFGQENSVFVP------NLNPLFEEHSIRC 87
Query: 183 -ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
ALG SVA+T G V +WG GG G LGH T E PR + + K+
Sbjct: 88 IALGGLHSVALTHQGDVFTWGYGGFGALGHKV---------YTRELVPRRVDDSWDCKIS 138
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVD-------KMLFQEGNHARRPS------------ 282
A H+A I E+G +Y++G D EG PS
Sbjct: 139 AIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASV 198
Query: 283 ---------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES-PVDQVSCGWKH 332
L G+L+ WG+N N LG G D L E + P E + Q++CG H
Sbjct: 199 SCGGFFTMALTKEGQLWNWGANSNYELGRG--DNLGGWEPMPVPSLEGVRITQIACGGYH 256
Query: 333 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 391
+ A++ EGK+L+WG GG GQLG + + PT + + K + ++
Sbjct: 257 SLALTEEGKVLSWGHGGH------------GQLGSSSLRNQKVPTEIEALADKKIVFIAS 304
Query: 392 GFNHTGALLE 401
G + + A+ +
Sbjct: 305 GGSSSAAITD 314
>gi|351711665|gb|EHB14584.1| Putative E3 ubiquitin-protein ligase HERC3 [Heterocephalus glaber]
Length = 1051
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 136/296 (45%), Gaps = 60/296 (20%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFS--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AAG HS + +G V FG WG N G
Sbjct: 192 LAQVAAGGAHSFALSLSGAV--FG----------------------------WGMNNAGQ 221
Query: 300 LGIGSID-----VLHSPERVQGPFS--ESP----------VDQVSCGWKHTAAISE 338
LG+ L E ++G +S ESP V +SCG +HTA +++
Sbjct: 222 LGLSDEKGIKQGALDKTENIRGLYSNRESPCHVKLLRTQKVVYISCGDEHTAVLTK 277
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 137/314 (43%), Gaps = 61/314 (19%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
L +T + PRLI++L + + G H C+
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWH--CL--------------------- 150
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHT 333
+L + G+ +TWG N +G LG+G SP+RV+ P+ QV+ G H+
Sbjct: 151 -------ALAADGQFFTWGKNSHGQLGLGKEFSSQASPQRVRS-LEGIPLAQVAAGGAHS 202
Query: 334 AAIS-EGKILTWGW--GGSHGTFSEDGHSSGGQLGHGNDVDYIH-----PTIVNFGENVK 385
A+S G + WG G G E G G L ++ ++ P V K
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKGIKQGA-LDKTENIRGLYSNRESPCHVKLLRTQK 261
Query: 386 ALQVSCGFNHTGAL 399
+ +SCG HT L
Sbjct: 262 VVYISCGDEHTAVL 275
>gi|332233496|ref|XP_003265938.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Nomascus leucogenys]
Length = 1020
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 141/309 (45%), Gaps = 42/309 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGD------------------ 262
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
N +G LG P+ V+ + V QV CG HT A + G+
Sbjct: 263 ------------NRSGQLGYSPTPEKRGPQLVE--IIDGLVSQVDCGSYHTLAYVHTTGQ 308
Query: 341 ILTWGWGGS 349
++++G G S
Sbjct: 309 VVSFGHGPS 317
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 145/330 (43%), Gaps = 65/330 (19%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLR-ISGLKKEVVQISTGYHH 134
A G H+L L V + G N GQLG G EP++ + L ++V S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLV--SCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G + ++ P K+ L+GI Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-ELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSF--- 194
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
+L G + WGSN G L + +V P +
Sbjct: 195 ---------------------------ALSLCGTSFGWGSNSAGQLALSGRNV---PVQS 224
Query: 315 QGPFSESPVDQ-----VSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
P S + +SCG +HTA +++ GK+ T+G D S GQLG+
Sbjct: 225 NKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFG----------DNRS--GQLGYSP 272
Query: 369 DVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+ P +V + + + QV CG HT A
Sbjct: 273 TPEKRGPQLVEIIDGLVS-QVDCGSYHTLA 301
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 123/282 (43%), Gaps = 56/282 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAPRGELPEPIQALETLNVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G HS + ++ +V ++WG N +G LG+G
Sbjct: 134 SCGHYHSLALSKDSQV------------------------------FSWGKNSHGQLGLG 163
Query: 304 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
SP+RV+ P+ QV+ G H+ A+S ++GWG +S G
Sbjct: 164 KEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLCGT-SFGWGS----------NSAG 211
Query: 363 QL---GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QL G V P V +N+ + +SCG HT L +
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQ 253
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G L E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G E + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ ++ + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFG 313
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 78/188 (41%), Gaps = 38/188 (20%)
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG---------- 286
G ++ AA+G HS + N RV GD + ++ + P I
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVS 81
Query: 287 ------------GELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 333
G ++ WG+ G LGIG + ++ +P+++ + + QVSCG H+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITT-LNGIKIIQVSCGHYHS 140
Query: 334 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 391
A+S + ++ +W G +S GQLG G + P V E + QV+
Sbjct: 141 LALSKDSQVFSW------------GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAA 188
Query: 392 GFNHTGAL 399
G H+ AL
Sbjct: 189 GGAHSFAL 196
>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
Length = 2440
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 168/363 (46%), Gaps = 66/363 (18%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSL-------------------------- 627
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
+L S G++Y WG CLG GS + ++ + + + VS G H A+S
Sbjct: 628 ----ALTSTGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALS 681
Query: 338 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI-HPTIVNFGENVKALQVSCGFNH 395
+ ++ W G++S GQ G GN I P V+ + + Q+S G +H
Sbjct: 682 HDNEVYAW------------GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSH 729
Query: 396 TGA 398
+ A
Sbjct: 730 SLA 732
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTED---- 529
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
GELYTWG + G LG G + + P V+
Sbjct: 530 --------------------------GELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--- 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|410896622|ref|XP_003961798.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Takifugu
rubripes]
Length = 531
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 121/225 (53%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSA-FEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV+ SA + +ACG H++ LT++G VYA G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGVAPVLVSATLLNRKVTEVACGSHHSMALTDSGEVYAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P R+S + V I G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P ++ L G+ +Q G+ S+A+T G + +WGA G+LG G +S+ L
Sbjct: 218 NGNQL--TPCRLVALQGLCVQQVVSGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+ +++ E E + V+IAA H SA ++G+VY++G
Sbjct: 276 PV--------QIMTEKERI-VEIAACHSTHTSAAKTQSGQVYMWG 311
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 121/271 (44%), Gaps = 48/271 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSA 137
G H L TE G ++A G N + QLG + + P+ +S L ++V +++ G HHS A
Sbjct: 84 GPHILLATEDGELFAWGHNGYSQLG-NGTTNQGVAPVLVSATLLNRKVTEVACGSHHSMA 142
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGG 196
+T GE+Y WG N+ GQ+G G A + P P +V CL G S+AV G
Sbjct: 143 LTDSGEVYAWGYNNCGQVGSGSTANQ--PTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNG 200
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+V WG G+G+LG G + L TP + L+G+ V+ +G+ HS
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQL---------TPCRLVALQGLCVQQVVSGYAHSL----- 246
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
+L G LY WG+N G LG G+ SP ++
Sbjct: 247 -------------------------ALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQIMT 281
Query: 317 PFSESPVDQVSCGWKHTAA--ISEGKILTWG 345
E V+ +C HT+A G++ WG
Sbjct: 282 E-KERIVEIAACHSTHTSAAKTQSGQVYMWG 311
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 137/316 (43%), Gaps = 59/316 (18%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
+ P +S ++K V T + + IT D E+Y +G N + LG G + +P KV+
Sbjct: 13 MSPQELSTIRKAYV-FGTSANEAIYITSDDEVYAFGLNCSNCLGTGDSQCTI--VPKKVD 69
Query: 173 CLSGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
LSG K +L + + T G++ +WG G +LG+G + + P
Sbjct: 70 ILSG--RKVVSLSYGSGPHILLATEDGELFAWGHNGYSQLGNGTTNQGVA---------P 118
Query: 230 RLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS------ 282
L+ L KV A G HS + ++G VY +G ++ G+ A +P+
Sbjct: 119 VLVSATLLNRKVTEVACGSHHSMALTDSGEVYAWGYNNCGQV--GSGSTANQPTPRRVSS 176
Query: 283 -------------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
++ GE+Y WG N NG LG+G+ +P R+ V
Sbjct: 177 CLQNRVAVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLVA-LQGLCV 235
Query: 324 DQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 383
QV G+ H+ A+++ +L + WG ++ GQLG GN + + P + E
Sbjct: 236 QQVVSGYAHSLALTDEGLL-YAWGA----------NTYGQLGTGNKSNQLSPVQI-MTEK 283
Query: 384 VKALQV-SCGFNHTGA 398
+ +++ +C HT A
Sbjct: 284 ERIVEIAACHSTHTSA 299
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 82/171 (47%), Gaps = 30/171 (17%)
Query: 29 RWISSTLQRRFAAL-------------------WGNGDYGRLGLGSLESRWRPVVCSAFE 69
R +SS LQ R A WG G+LGLG+ ++ P A +
Sbjct: 172 RRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLVALQ 231
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
++ + G AH+L LT+ G +YA G N +GQLG + N L P++I K+ +V+I+
Sbjct: 232 GLCVQQVVSGYAHSLALTDEGLLYAWGANTYGQLG-TGNKSNQLSPVQIMTEKERIVEIA 290
Query: 130 TGY--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+ H S+A T G++YMWG+ GQ + ++P T C +F
Sbjct: 291 ACHSTHTSAAKTQSGQVYMWGQ-CRGQ-------SIILPYLTHFGCTDDVF 333
>gi|223973351|gb|ACN30863.1| unknown [Zea mays]
Length = 408
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 170/399 (42%), Gaps = 65/399 (16%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG G G+LG G + +P++ + + +A GGAH + LT G V+ G
Sbjct: 30 WGAGTDGQLGNGGFDDHHLPQPLLLPTRCRSRVSFVAGGGAHAIALTSDGEVFTWGRGTH 89
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG N+ P + L+ V +S G++HS T G+L+M G S GQLG G
Sbjct: 90 GQLG-HGNLDNMPHPKLVKFLENHTVTCVSAGWNHSGFATDSGQLFMCGDGSFGQLGTGD 148
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +V + ++ A G S+ + V +G+ G++G
Sbjct: 149 NLSRNFPF--EVAYFNATHIEKLAFGMRHSLVLLKDNSVYGFGSARRGQVGKCAS----- 201
Query: 220 FLRSTSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
R Y PRLI K+ A HSA +DE+G +Y++G RA+ +
Sbjct: 202 --RIQKSYNVPRLIDGFPNCKIVNIYANGDHSAALDESGHLYVWG-RALIGQHDDDQPSE 258
Query: 279 RRPSL--------------ISGGELYTWG---SNENGCLGIGSIDVLHSPERVQG----- 316
PSL +S GELYT G + G+G++ S R
Sbjct: 259 ILPSLSVSQVALGWHHALVLSAGELYTLGVYRHQKCDLPGLGNVLGQQSDTRATSSSHDC 318
Query: 317 ----------PFSE-SPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 364
PF + V Q++ G +H+A +++ G + TWGWG GQL
Sbjct: 319 SSSLSVLETVPFLDGEQVAQIASGTEHSALVTDKGTVFTWGWG------------EHGQL 366
Query: 365 GHGNDVDYIHPTIVNFGENVKALQ----VSCGFNHTGAL 399
G G+ D++ P VN G+N + + V CG T A+
Sbjct: 367 GLGDTSDHVAPQRVNVGDNGQGMSGSFAVYCGSGFTVAV 405
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 14/110 (12%)
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFS-ESPVDQVSCGWKHTAAI-SEGKILTWGWG 347
++WG+ +G LG G D H P+ + P S V V+ G H A+ S+G++ TWG G
Sbjct: 28 WSWGAGTDGQLGNGGFDDHHLPQPLLLPTRCRSRVSFVAGGGAHAIALTSDGEVFTWGRG 87
Query: 348 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
+ GQLGHGN + HP +V F EN VS G+NH+G
Sbjct: 88 ------------THGQLGHGNLDNMPHPKLVKFLENHTVTCVSAGWNHSG 125
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 265 RAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES-PV 323
R ++ F G A +L S GE++TWG +G LG G++D + P+ V+ F E+ V
Sbjct: 57 RCRSRVSFVAGGGAHAIALTSDGEVFTWGRGTHGQLGHGNLDNMPHPKLVK--FLENHTV 114
Query: 324 DQVSCGWKHTA-AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 382
VS GW H+ A G++ G G+F GQLG G+++ P V +
Sbjct: 115 TCVSAGWNHSGFATDSGQLFMCG----DGSF--------GQLGTGDNLSRNFPFEVAYFN 162
Query: 383 NVKALQVSCGFNHTGALLE 401
+++ G H+ LL+
Sbjct: 163 ATHIEKLAFGMRHSLVLLK 181
>gi|301755358|ref|XP_002913533.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Ailuropoda melanoleuca]
Length = 1011
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 170/359 (47%), Gaps = 59/359 (16%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL TE G VYA+G N+ G
Sbjct: 68 MFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYASGGNNEG 127
Query: 102 QLGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + + S + ++++ Q+S G + S+A+T DGEL+MWG NS GQ+GL K
Sbjct: 128 QLGLGDTDERNSFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGL--K 185
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P +V G + G+ S VT G++ ++G SG+LG ++ +
Sbjct: 186 NITNVCVPQQVTV--GKPISWISCGYYHSAFVTTEGELYTFGEPESGKLGLPKQLLV--- 240
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + + G+ K+ + AC G + ++AV
Sbjct: 241 -------NHRMPQSVPGIPEKV-----VQVAC--GGGHTVVLTEKAV------------- 273
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSP-ERVQGPFSESPVDQVSCGWKHTAAISE- 338
YT+G + G LG+G+ + +P +V + + + CG HTA I++
Sbjct: 274 ---------YTFGLGQFGQLGLGTF-LFETPVPKVIEHIKDLKISSIFCGENHTALITDL 323
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCGFNHT 396
G + T+G G HG LG N + PT+ NF + L V+CG HT
Sbjct: 324 GLMYTFG-DGRHGKLG---------LGLENFTNQFTPTLCSNFLRFIVQL-VACGGCHT 371
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 138/297 (46%), Gaps = 47/297 (15%)
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
+S G H++ +T + +LYM+G N+ GQLGLG K+ + PT V+ L K AA G
Sbjct: 50 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKS--TVNKPTCVKALKPEKVKFAACGRN 107
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
++ T GGKV + G G+LG G F + + R IK+L +AG
Sbjct: 108 HTLVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQRKIKQL--------SAGS 159
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI--------------------SGG 287
SA + E+G ++++GD + ++ + + P + + G
Sbjct: 160 NTSAALTEDGELFMWGDNSEGQIGLKNITNVCVPQQVTVGKPISWISCGYYHSAFVTTEG 219
Query: 288 ELYTWGSNENGCLGI-GSIDVLHS-PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 345
ELYT+G E+G LG+ + V H P+ V G V QV+CG HT ++E + T+G
Sbjct: 220 ELYTFGEPESGKLGLPKQLLVNHRMPQSVPG--IPEKVVQVACGGGHTVVLTEKAVYTFG 277
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G GQLG G + + P ++ +++K + CG NHT + +
Sbjct: 278 LG------------QFGQLGLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALITD 322
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + ++ +ACGG HTL
Sbjct: 329 FGDGRHGKLGLGLENFTNQFTPTLCSNFLRFIVQLVACGGCHTLVF 374
>gi|414586169|tpg|DAA36740.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 1056
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 144/334 (43%), Gaps = 50/334 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G + ++P + + +++ +ACG HT +T TG +Y G ++
Sbjct: 287 WGEECSGRLGHGIGTNVFQPRLVESLSTCNVELIACGEFHTCAVTATGDLYTWGDGTHNA 346
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG N+ + + P R+SG V +S G H++ IT G+LY +G + G LG G
Sbjct: 347 GLLGHGSNVSHWI-PKRVSGPLDGLPVSAVSCGTWHTALITSSGQLYTFGDGTFGVLGHG 405
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---------GGGKVLSWGAGGSGRL 209
+A+ P +VE L G+ T + G + AV GK+ +WG G RL
Sbjct: 406 NRAS--CSYPKEVESLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRL 463
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG SS L P + L AA G + + +G ++ G V
Sbjct: 464 GHGDRSSKL---------KPTCVPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGS-PVYG 513
Query: 270 MLFQEGNHARRPSLI-----------------------SGGELYTWGSNENGCLGIGSID 306
L N R P L+ + GE+YTWG NG LG G I
Sbjct: 514 QLGNPNNDGRYPRLVEEQLGGGGVVEVACGSYHVAVLTNAGEVYTWGKGTNGRLGHGDIA 573
Query: 307 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
P V+ + V +V+CG TAAI + K
Sbjct: 574 DRKVPTLVEA-LKDRSVKRVACGSSFTAAICQHK 606
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 124/272 (45%), Gaps = 60/272 (22%)
Query: 142 GELYMWGK---NSNGQLGLGKKA-----AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G++Y+WG+ ++ + G + A + +P +E + A G + + VT
Sbjct: 220 GDIYVWGEVICDTISRSGSDRSAYSPGTTTDVLVPKPLESNVMLDVSYVACGVKHAALVT 279
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
+V +WG SGRLGHG +G T+ + PRL++ L V++ A G H+ +
Sbjct: 280 RQAEVFTWGEECSGRLGHG-----IG----TNVFQPRLVESLSTCNVELIACGEFHTCAV 330
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH-SPE 312
G +Y +GD G++ G LG GS +V H P+
Sbjct: 331 TATGDLYTWGD----------------------------GTHNAGLLGHGS-NVSHWIPK 361
Query: 313 RVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
RV GP PV VSCG HTA I S G++ T+G GTF G LGHGN
Sbjct: 362 RVSGPLDGLPVSAVSCGTWHTALITSSGQLYTFG----DGTF--------GVLGHGNRAS 409
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
+P V + ++ + VSCG HT A++E +
Sbjct: 410 CSYPKEVESLKGLRTISVSCGVWHTAAVVEVI 441
>gi|413942403|gb|AFW75052.1| putative regulator of chromosome condensation (RCC1) family
protein, partial [Zea mays]
Length = 688
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 161/378 (42%), Gaps = 73/378 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E RP + + ++ +ACG HT +T TG +Y G +
Sbjct: 101 WGEDSGGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHTCAVTTTGELYTWGDGTYNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++G+ + P RISG + +V +S G H++ IT G+L+ +G S G LG G
Sbjct: 161 GLLGHGNDVGHWI-PKRISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-------------GGGKVLSWGAGG 205
K + P +VE LSG+ T A G + A+ GK+ +WG G
Sbjct: 220 D--LKSVSYPREVESLSGLKTIAVACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGD 277
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
RLGHG + + L P + L A G + + +G+V G+
Sbjct: 278 KHRLGHGDKETRL---------KPTCVATLIDHDFYRVACGHSLTVALTTSGQVLSMGN- 327
Query: 266 AVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 325
AV L + R P L+ E+ +G V Q
Sbjct: 328 AVYGQLGNPHSDGRIPCLV-----------EDKIVG-------------------EQVLQ 357
Query: 326 VSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 384
++CG H A ++ ++ TWG G + G+LGHG+ D PT+V ++
Sbjct: 358 IACGSYHVAVLTNRSEVFTWGKGAN------------GRLGHGDTEDRKVPTLVEALKDR 405
Query: 385 KALQVSCGFNHTGALLEY 402
++CG N T A+ +Y
Sbjct: 406 AVRYIACGANFTAAICQY 423
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 126/303 (41%), Gaps = 72/303 (23%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H++ + +GE++ WG++S G+LG G + V P VE
Sbjct: 69 KPLE-SNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVR--PRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG + + P+
Sbjct: 126 LTVSNVDFVACGEFHTCAVTTTGELYTWGDGTYNVGLLGHGND---------VGHWIPKR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
I LEG++V + G H+A I S G+L+
Sbjct: 177 ISGALEGLQVAYVSCGTWHTALI------------------------------TSMGQLF 206
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------------ 338
T+G G LG G + + P V+ S V+CG HTAAI E
Sbjct: 207 TFGDGSFGVLGHGDLKSVSYPREVES-LSGLKTIAVACGVWHTAAIVEVIVTRSSSSVKL 265
Query: 339 --GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
GK+ TWG G H +LGHG+ + PT V + +V+CG + T
Sbjct: 266 SAGKLFTWGDGDKH------------RLGHGDKETRLKPTCVATLIDHDFYRVACGHSLT 313
Query: 397 GAL 399
AL
Sbjct: 314 VAL 316
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 111/273 (40%), Gaps = 63/273 (23%)
Query: 142 GELYMWGK---------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
G++Y+WG+ S+ + + ++P P + + ++ G + + V
Sbjct: 35 GDVYVWGEVVCDTSVRTGSDTVISSTGRIDILLPKPLESNLVLDVY--HVDCGVKHAALV 92
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
G+V +WG GRLGHG + PRL++ L V A G H+
Sbjct: 93 MKNGEVFTWGEDSGGRLGHGTREDCV---------RPRLVESLTVSNVDFVACGEFHTCA 143
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH-SP 311
+ G +Y +GD G+ G LG G+ DV H P
Sbjct: 144 VTTTGELYTWGD----------------------------GTYNVGLLGHGN-DVGHWIP 174
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+R+ G V VSCG HTA I S G++ T+G G S G LGHG+
Sbjct: 175 KRISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDG------------SFGVLGHGDLK 222
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
+P V +K + V+CG HT A++E +
Sbjct: 223 SVSYPREVESLSGLKTIAVACGVWHTAAIVEVI 255
>gi|296196030|ref|XP_002745681.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Callithrix
jacchus]
Length = 1006
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 136/291 (46%), Gaps = 42/291 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P A + ++CG H+L + G V+A G GQLGI E + P +I+ L
Sbjct: 66 PEPVQALKTLKFNLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEINFTPKKITTL 125
Query: 122 K-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
+++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+ + P +V L GI
Sbjct: 126 TGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKELSSQAS-PQRVRSLEGIPVA 184
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q A G S A++ G WG+ +G+L ++ G P I L+ + V
Sbjct: 185 QVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNVQVQSNKPLSIGALKNLGV 238
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCL 300
+ G H+A + ++G+V+ FGD + ++ + R P ++
Sbjct: 239 IYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYNPTPKKRGPQIV---------------- 282
Query: 301 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 349
ER+ G V Q+ CG HT A + G+++++G G S
Sbjct: 283 -----------ERIDG-----LVSQIDCGGDHTIAYVHTTGQVVSFGHGPS 317
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 125/280 (44%), Gaps = 56/280 (20%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G H+ + + ++ G+NS GQ LG++ A +P V+ L + +
Sbjct: 24 ELLQAASGERHALLLLTNSSVHSCGENSRGQ--LGRRGAPRGDLPEPVQALKTLKFNLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------NFTPKKITTLTGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G HS + ++ +V ++WG N +G LG+G
Sbjct: 134 SCGHYHSLALSKDSQV------------------------------FSWGKNSHGQLGLG 163
Query: 304 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
+ SP+RV+ PV QV+ G H+ A+S ++GWG +S G
Sbjct: 164 KELSSQASPQRVRS-LEGIPVAQVAAGGAHSFALSLCGT-SFGWGS----------NSAG 211
Query: 363 QL---GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
QL G V P + +N+ + +SCG HT L
Sbjct: 212 QLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVL 251
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 110/230 (47%), Gaps = 14/230 (6%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEINFTPKKITTLTGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + + P R+ L+ V Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKELSSQASPQRVRSLEGIPVAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIP-IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L L + +V P + L + + G E + ++ GKV ++G SG+LG+
Sbjct: 213 LALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYNP 272
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G P++++ ++G+ +I G A + G+V FG
Sbjct: 273 TPKKRG---------PQIVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFG 313
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 91/169 (53%), Gaps = 8/169 (4%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG L S+ P + E + +A GGAH+ L+ G + G N G
Sbjct: 152 WGKNSHGQLGLGKELSSQASPQRVRSLEGIPVAQVAAGGAHSFALSLCGTSFGWGSNSAG 211
Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N+ S +PL I LK V+ IS G H++ ++ DG+++ +G NS+GQLG
Sbjct: 212 QLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYN 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGS 206
K P VE + G+ + Q G + ++A V G+V+S+G G S
Sbjct: 272 PTPKKR--GPQIVERIDGLVS-QIDCGGDHTIAYVHTTGQVVSFGHGPS 317
>gi|270015228|gb|EFA11676.1| hypothetical protein TcasGA2_TC008540 [Tribolium castaneum]
Length = 835
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 168/361 (46%), Gaps = 60/361 (16%)
Query: 49 GRLGLGSLESRWRP--VVCSAFE-KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
G LGLG L ++ P +V + F+ K + +++CG HTL LT+ G VYA G N +GQLG+
Sbjct: 387 GCLGLGPLLTQSSPPKLVQTLFDLKVKVLSVSCGRKHTLALTDYG-VYAWGSNTYGQLGL 445
Query: 106 SENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK----K 160
I S P I+ L K++VQ+S G +H+ A++ GE+Y WG +GQLG G
Sbjct: 446 GPLIQESPYPQIITNLAFKKMVQVSAGQYHTIALSSSGEVYTWGWGIHGQLGHGDCDNIY 505
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
K++P KV Q A G S+ +T GK+ +G+ G+L + Q
Sbjct: 506 YPKLLPFQHKVV--------QVAAGHAHSLILTREGKLFGFGSNVFGQLEYCQ------- 550
Query: 221 LRSTSEYTPRLIKELEGVKVKIA--AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
L S P LI + + I A G+ H+ + + VY +G + + Q N
Sbjct: 551 LDSNKSTRPVLILIMPDIYTPIEKIATGYFHNIAVRADQEVYTWGASPQEVRILQSKNLQ 610
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
+ +NG L + D + + ++ P++QV G++H+ +
Sbjct: 611 K----------------QNG-LSLKGPDSWKASVHIYSGGNKKPIEQVVVGYRHSVILHN 653
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
GK+L WG ++D S +L +++ + F K + VSCG ++T A
Sbjct: 654 GKLL---WGK-----NKDDELSPPKLNDKDNISF-------FAH--KFIHVSCGLDYTMA 696
Query: 399 L 399
+
Sbjct: 697 I 697
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 146/313 (46%), Gaps = 50/313 (15%)
Query: 43 WGNGDYGRLGLGSL--ESRWRPVVCS-AFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ YG+LGLG L ES + ++ + AF+K + ++ G HT+ L+ +G VY G
Sbjct: 435 WGSNTYGQLGLGPLIQESPYPQIITNLAFKK--MVQVSAGQYHTIALSSSGEVYTWGWGI 492
Query: 100 FGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQL G +NI Y ++ + +VVQ++ G+ HS +T +G+L+ +G N GQL
Sbjct: 493 HGQLGHGDCDNIYYP----KLLPFQHKVVQVAAGHAHSLILTREGKLFGFGSNVFGQLEY 548
Query: 158 GKKAAKVIPIPTKVECLSGIFT--KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+ + P + + I+T ++ A G+ ++AV +V +WGA QE
Sbjct: 549 CQLDSNKSTRPVLILIMPDIYTPIEKIATGYFHNIAVRADQEVYTWGAS-------PQEV 601
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF--GDRAVDKMLFQ 273
IL + +++ G+ +K + V+I+ G++ K + Q
Sbjct: 602 RIL---------QSKNLQKQNGLSLKGPDSW---------KASVHIYSGGNK---KPIEQ 640
Query: 274 EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 333
R ++ G+L WG N++ L ++ ++ F VSCG +T
Sbjct: 641 VVVGYRHSVILHNGKLL-WGKNKDDELSPPKLN-----DKDNISFFAHKFIHVSCGLDYT 694
Query: 334 AAISE-GKILTWG 345
AI GK+L WG
Sbjct: 695 MAIDHAGKLLAWG 707
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 37/245 (15%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAAL 184
+S G+ H+ A+ + LY G +S+G LGLG + P P V+ L + K +
Sbjct: 362 HLSCGFEHA-AVVRNSCLYTMGVSSSGCLGLGPLLTQSSP-PKLVQTLFDLKVKVLSVSC 419
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G + ++A+T G V +WG+ G+LG LG L S Y P++I L K+ +
Sbjct: 420 GRKHTLALTDYG-VYAWGSNTYGQLG-------LGPLIQESPY-PQIITNLAFKKMVQVS 470
Query: 245 AGFLHSACIDENGRVYIFG-------------DRAVDKML-FQE------GNHARRPSLI 284
AG H+ + +G VY +G + K+L FQ HA L
Sbjct: 471 AGQYHTIALSSSGEVYTWGWGIHGQLGHGDCDNIYYPKLLPFQHKVVQVAAGHAHSLILT 530
Query: 285 SGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHTAAI-SEGK 340
G+L+ +GSN G L +D S V P +P+++++ G+ H A+ ++ +
Sbjct: 531 REGKLFGFGSNVFGQLEYCQLDSNKSTRPVLILIMPDIYTPIEKIATGYFHNIAVRADQE 590
Query: 341 ILTWG 345
+ TWG
Sbjct: 591 VYTWG 595
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 15/121 (12%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPER-VQGPFS-ESPVDQVSCGWKHTAAISEG 339
+++ LYT G + +GCLG+G + SP + VQ F + V VSCG KHT A+++
Sbjct: 371 AVVRNSCLYTMGVSSSGCLGLGPLLTQSSPPKLVQTLFDLKVKVLSVSCGRKHTLALTDY 430
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGA 398
+ W G ++ GQLG G + + +P I+ K +QVS G HT A
Sbjct: 431 GVYAW------------GSNTYGQLGLGPLIQESPYPQIITNLAFKKMVQVSAGQYHTIA 478
Query: 399 L 399
L
Sbjct: 479 L 479
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 49/119 (41%), Gaps = 24/119 (20%)
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV------SCGWKHTAAISEGKILTWGW 346
G + I +D + PE P E+ +D++ SCG++H A + + T G
Sbjct: 327 GKTDKDEYNIHLLDFMDPPE---PPIEETLIDKMPDLHHLSCGFEHAAVVRNSCLYTMGV 383
Query: 347 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN---FGENVKALQVSCGFNHTGALLEY 402
SS G LG G + P + F VK L VSCG HT AL +Y
Sbjct: 384 ------------SSSGCLGLGPLLTQSSPPKLVQTLFDLKVKVLSVSCGRKHTLALTDY 430
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
G KK + Q+ GY HS I +G+L +WGKN + +L K K + + F
Sbjct: 633 GNKKPIEQVVVGYRHS-VILHNGKL-LWGKNKDDELSPPKLNDK-----DNISFFAHKFI 685
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
+ G + ++A+ GK+L+WG+ +
Sbjct: 686 -HVSCGLDYTMAIDHAGKLLAWGSPSMAQ 713
>gi|47214395|emb|CAG00876.1| unnamed protein product [Tetraodon nigroviridis]
Length = 371
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 169/379 (44%), Gaps = 45/379 (11%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++LK D+ G + + R F ++G+ ++G+LGLGS + +P A +
Sbjct: 19 SKFWLKNDVPSQISCGDEHTALITKNGRLF--MFGSNNWGQLGLGSKVTVNKPTCVKALK 76
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI---SENIGYSLEPLRISGLKK--E 124
+ ACG HTL T G V+++G N GQLG+ E + RI L
Sbjct: 77 SEKVLLAACGRNHTLICTGEGRVFSSGGNSEGQLGLGDCEERTTFR----RIHALDSLGP 132
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ ++ G + S+A+T G+L+MWG N+ GQ+GLGK++ P P +V G +
Sbjct: 133 IKMLAAGSNTSAALTESGKLFMWGDNTEGQIGLGKESHA--PWPQEVSV--GAPVSWVSC 188
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G+ S VT G + ++G SG+LG E + P+ ++ + G V+ A
Sbjct: 189 GYYHSALVTAAGALYTFGERDSGKLGLTTE-------QLPRHRVPQPVRSI-GEPVRQVA 240
Query: 245 AGFLHSACIDENG----RVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCL 300
G H+ + G R AVD F +S L+T+G + G L
Sbjct: 241 CGGGHTVALTGGGSTRRRPRCTRGFAVDLAGFL---------WLSEDRLFTFGLGQFGQL 291
Query: 301 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 360
G G+ R+ F + V QV+CG H+A I++G +L G HG
Sbjct: 292 GHGTFVFESRLPRLVEHFKKGRVRQVACGENHSAVITDGGLLYTFGDGRHGKLG------ 345
Query: 361 GGQLGHGNDVDYIHPTIVN 379
LG N + PT+ +
Sbjct: 346 ---LGDENFTNQFKPTLCS 361
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 161/353 (45%), Gaps = 63/353 (17%)
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYM 146
ETG V+ FG+ ++NI P + LK +V QIS G H++ IT +G L+M
Sbjct: 1 ETGAVFT-----FGKSKFADNI-----PSKFW-LKNDVPSQISCGDEHTALITKNGRLFM 49
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+G N+ GQLGLG K + PT V+ L AA G ++ TG G+V S G
Sbjct: 50 FGSNNWGQLGLGSKV--TVNKPTCVKALKSEKVLLAACGRNHTLICTGEGRVFSSGGNSE 107
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LG G T R I L+ + +K+ AAG SA + E+G+++++GD
Sbjct: 108 GQLGLGD---------CEERTTFRRIHALDSLGPIKMLAAGSNTSAALTESGKLFMWGDN 158
Query: 266 AVDKMLFQEGNHARRPSLIS--------------------GGELYTWGSNENGCLGIGSI 305
++ + +HA P +S G LYT+G ++G LG+ +
Sbjct: 159 TEGQIGLGKESHAPWPQEVSVGAPVSWVSCGYYHSALVTAAGALYTFGERDSGKLGLTTE 218
Query: 306 DVLHSPERVQGPFSE--SPVDQVSCGWKHTAAISEG------KILTWGWGGSHGTF---S 354
+ RV P PV QV+CG HT A++ G T G+ F S
Sbjct: 219 QLPR--HRVPQPVRSIGEPVRQVACGGGHTVALTGGGSTRRRPRCTRGFAVDLAGFLWLS 276
Query: 355 ED-----GHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
ED G GQLGHG V + P +V + + QV+CG NH+ + +
Sbjct: 277 EDRLFTFGLGQFGQLGHGTFVFESRLPRLVEHFKKGRVRQVACGENHSAVITD 329
>gi|383453816|ref|YP_005367805.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
gi|380728295|gb|AFE04297.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
Length = 748
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 164/379 (43%), Gaps = 61/379 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+L SR P SA + +LA G AH L L G V+A G N Q
Sbjct: 124 WGDNASGQLGDGTLTSRLLPQRVSALSN--VVSLASGFAHVLALRADGTVWAWGDNRNNQ 181
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S PL++ GL VV + G S A+ DG L+ WG N GQLG G
Sbjct: 182 LG-DGTLTRSSVPLQVPGLSG-VVAVVAGGSSSLALRADGTLWAWGDNRYGQLGDGTTVR 239
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V L ++G ++A+ G V +WG G+LG G
Sbjct: 240 RITPV--QVASLD--SVVSVSVGAYHALALRADGTVWAWGHNAYGQLGDG---------- 285
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP- 281
+ ++ T + L V+ + AG HS + +G V+ +GD ++ GN P
Sbjct: 286 TNTQRTQPVSVSLTDVRTLV--AGNYHSLAVRTDGAVWAWGDNRYRQL--GTGNLTSSPL 341
Query: 282 ----------SLISG----------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L++G G ++WG N G LG + + +P +V G +
Sbjct: 342 PLQAGMTGGVTLVAGYRHSVALGADGTAWSWGDNVFGQLGDTTFEPRMAPVQVSG-LALG 400
Query: 322 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
D S G HT + + G++ W G + GQLG+G D P VN
Sbjct: 401 RADATS-GQLHTVMLGANGRLWAW------------GDNQQGQLGNGTQQDSSLPLPVNL 447
Query: 381 GENVKALQVSCGFNHTGAL 399
+ V+ G+ HT AL
Sbjct: 448 ---TDVISVASGYRHTAAL 463
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 165/382 (43%), Gaps = 65/382 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G+LG + E R PV S A G HT+ L G ++A G N GQ
Sbjct: 372 WGDNVFGQLGDTTFEPRMAPVQVSGLALGRADA-TSGQLHTVMLGANGRLWAWGDNQQGQ 430
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG SL PL ++ +V+ +++GY H++A+ DG ++ WG N GQLG G
Sbjct: 431 LGNGTQQDSSL-PLPVN--LTDVISVASGYRHTAALRSDGTVWTWGMNRFGQLGEGTVTD 487
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P P +V L G+ A G S+A+ G V +WG G+LG G
Sbjct: 488 R--PTPVQVVGLGGV--TAIATGDNHSLALRSNGTVWAWGFNRYGQLGDGT--------- 534
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ P L + V IAA G HS + +G V+ FG Q GN R +
Sbjct: 535 AVDRRQPVQASGLSNI-VAIAAGGS-HSLALRSDGTVWAFGY----NFDGQLGNGTRTWT 588
Query: 283 LI------------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 318
L+ + G ++ WG N +G LG+G+ P +V G
Sbjct: 589 LVPVQAVGLSSVVSLAAGSLYSLALRADGTVWAWGYNASGQLGVGTTQGSAQPLQVPG-- 646
Query: 319 SESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 377
S + ++ G H+ A+ S+G + WG F+ + GQLG+G + P +
Sbjct: 647 -LSGITSIAAGSYHSLALRSDGWVWAWG-------FNFE-----GQLGNGTSTPRLSPGL 693
Query: 378 VNFGENVKALQVSCGFNHTGAL 399
V N A+ + G H+ A+
Sbjct: 694 VAGMSN--AVAIIAGDQHSLAM 713
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 112/221 (50%), Gaps = 19/221 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G+ R +PV S + A+A GG+H+L L G V+A G N GQ
Sbjct: 522 WGFNRYGQLGDGTAVDRRQPVQASGLSN--IVAIAAGGSHSLALRSDGTVWAFGYNFDGQ 579
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++L P++ GL VV ++ G +S A+ DG ++ WG N++GQLG+G
Sbjct: 580 LGNGTRT-WTLVPVQAVGLS-SVVSLAAGSLYSLALRADGTVWAWGYNASGQLGVGTTQG 637
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P+ +V LSGI + A G S+A+ G V +WG G+LG+G
Sbjct: 638 SAQPL--QVPGLSGITSIAA--GSYHSLALRSDGWVWAWGFNFEGQLGNGT--------- 684
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
ST +P L+ + I AG HS + +G V+ +G
Sbjct: 685 STPRLSPGLVAGMSNAVAII--AGDQHSLAMKADGTVWAWG 723
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 157/379 (41%), Gaps = 61/379 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +LG G+L P+ + A+ GG+ +L L G ++A G N +GQ
Sbjct: 174 WGDNRNNQLGDGTLTRSSVPLQVPGLS--GVVAVVAGGSSSLALRADGTLWAWGDNRYGQ 231
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + P++++ L V S G +H+ A+ DG ++ WG N+ GQLG G
Sbjct: 232 LGDGTTV-RRITPVQVASLDSVVSV-SVGAYHALALRADGTVWAWGHNAYGQLGDGTNTQ 289
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ + + + G S+AV G V +WG +LG G
Sbjct: 290 RTQPVSVSLTDVRTLVA-----GNYHSLAVRTDGAVWAWGDNRYRQLGTGNL-------- 336
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
TS P GV + AG+ HS + +G + +GD ++ P
Sbjct: 337 -TSSPLPLQAGMTGGVTL---VAGYRHSVALGADGTAWSWGDNVFGQLGDTTFEPRMAPV 392
Query: 283 LISG---------------------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+SG G L+ WG N+ G LG G+ P P + +
Sbjct: 393 QVSGLALGRADATSGQLHTVMLGANGRLWAWGDNQQGQLGNGTQQDSSLPL----PVNLT 448
Query: 322 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
V V+ G++HTAA+ S+G + TW G + GQLG G D P V
Sbjct: 449 DVISVASGYRHTAALRSDGTVWTW------------GMNRFGQLGEGTVTDRPTPVQVVG 496
Query: 381 GENVKALQVSCGFNHTGAL 399
V A ++ G NH+ AL
Sbjct: 497 LGGVTA--IATGDNHSLAL 513
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 142/317 (44%), Gaps = 50/317 (15%)
Query: 54 GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
G+ R V A E+ LA G H+L + G V+A G N GQLG + +
Sbjct: 33 GAAAPREATVRQRAGERLPPVRLALGQYHSLAVHSDGTVFAWGFNRLGQLGDGTSRDKA- 91
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P++++GL +V ++ G +S A+ DG ++ WG N++GQLG G +++ +P +V
Sbjct: 92 SPVQVAGLT-QVTSVAAGDQYSLALDADGAVWAWGDNASGQLGDGTLTSRL--LPQRVSA 148
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
LS + + A GF +A+ G V +WG + +LG G T P +
Sbjct: 149 LSNVVSL--ASGFAHVLALRADGTVWAWGDNRNNQLGDGTL---------TRSSVPLQVP 197
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--P---------- 281
L GV + AG S + +G ++ +GD ++ +G RR P
Sbjct: 198 GLSGVVAVV--AGGSSSLALRADGTLWAWGDNRYGQL--GDGTTVRRITPVQVASLDSVV 253
Query: 282 ----------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD--QVSCG 329
+L + G ++ WG N G LG G+ + +R Q P S S D + G
Sbjct: 254 SVSVGAYHALALRADGTVWAWGHNAYGQLGDGT-----NTQRTQ-PVSVSLTDVRTLVAG 307
Query: 330 WKHTAAI-SEGKILTWG 345
H+ A+ ++G + WG
Sbjct: 308 NYHSLAVRTDGAVWAWG 324
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 127/290 (43%), Gaps = 52/290 (17%)
Query: 119 SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+G + V+++ G +HS A+ DG ++ WG N GQLG G K P+ +V L+ +
Sbjct: 46 AGERLPPVRLALGQYHSLAVHSDGTVFAWGFNRLGQLGDGTSRDKASPV--QVAGLTQVT 103
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
+ A G + S+A+ G V +WG SG+LG G TS P+ + L
Sbjct: 104 S--VAAGDQYSLALDADGAVWAWGDNASGQLGDGTL---------TSRLLPQRVSALS-- 150
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRP------------- 281
V A+GF H + +G V+ +GD +++ L + + P
Sbjct: 151 NVVSLASGFAHVLALRADGTVWAWGDNRNNQLGDGTLTRSSVPLQVPGLSGVVAVVAGGS 210
Query: 282 ---SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-S 337
+L + G L+ WG N G LG G+ +P +V S V VS G H A+ +
Sbjct: 211 SSLALRADGTLWAWGDNRYGQLGDGTTVRRITPVQVA---SLDSVVSVSVGAYHALALRA 267
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 387
+G + W GH++ GQLG G + P V+ +V+ L
Sbjct: 268 DGTVWAW------------GHNAYGQLGDGTNTQRTQPVSVSL-TDVRTL 304
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG+G+ + +P+ + ++A G H+L L G V+A G N GQ
Sbjct: 622 WGYNASGQLGVGTTQGSAQPLQVPGLS--GITSIAAGSYHSLALRSDGWVWAWGFNFEGQ 679
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L P ++G+ V I+ G HS A+ DG ++ WG N GQLG G
Sbjct: 680 LGNGTST-PRLSPGLVAGMSNAVAIIA-GDQHSLAMKADGTVWAWGLNIKGQLGTGDTTE 737
Query: 163 KVIPIPTK 170
P+ +
Sbjct: 738 AWFPVQVQ 745
>gi|328783019|ref|XP_395630.4| PREDICTED: hypothetical protein LOC412167, partial [Apis mellifera]
Length = 854
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 171/369 (46%), Gaps = 74/369 (20%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ D+G+LGLG +P + + +ACG AHTL T ++A G + G
Sbjct: 122 VFGSNDWGQLGLGHKNHISKPSCVKVLKPEKVTHVACGRAHTLICTVAEKIFACGSDQEG 181
Query: 102 QLG--ISENIGYSLE-PLRI-----SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
QLG IS IG S P+ I +G K +VQI G HHS A+T DG ++ WG N G
Sbjct: 182 QLGRGISA-IGDSTSTPVLIYDSGPTGSK--IVQIVAGSHHSLALTSDGNVFAWGSNLEG 238
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLGL + ++ PTKV + K+ G+ S+ +T G V G SG+LG
Sbjct: 239 QLGLPDISG-LVNKPTKVHIPEPV--KRINTGYYHSIFLTENGLVYVCGESESGKLGID- 294
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
+ F +++ P+ + +L + +A G H+ M
Sbjct: 295 ----INF---STQIMPKQM-QLPNPVIYVACGGH-HT-------------------MFLT 326
Query: 274 EGNHARRPSLISGGELYTWGSNENGCLGIGS-IDVLHSPERV-QGPFSESPVDQVSCGWK 331
E N+ LY GSN +G LG+G+ + LH+P+ + QG + ++SCG
Sbjct: 327 ENNN-----------LYCTGSNSSGQLGLGTNVTELHTPKLLSQGALKNERISRISCGES 375
Query: 332 HTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--- 387
HTA ++E GK+ T G G H G+LG + + +H + F + K L
Sbjct: 376 HTAILTESGKLYTCG-DGRH-----------GKLGLEENENNVHE--LTFVQRYKQLFIS 421
Query: 388 QVSCGFNHT 396
+SCG HT
Sbjct: 422 NISCGGCHT 430
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 136/306 (44%), Gaps = 53/306 (17%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V+ IS G HS+ I G L+++G N GQLGLG K I P+ V+ L A
Sbjct: 101 VISISCGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNH--ISKPSCVKVLKPEKVTHVAC 158
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE--LEGVKVKI 242
G ++ T K+ + G+ G+LG G I STS TP LI + G K+
Sbjct: 159 GRAHTLICTVAEKIFACGSDQEGQLGRG----ISAIGDSTS--TPVLIYDSGPTGSKIVQ 212
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKM-------LFQEGNHARRPS------------- 282
AG HS + +G V+ +G ++ L + P
Sbjct: 213 IVAGSHHSLALTSDGNVFAWGSNLEGQLGLPDISGLVNKPTKVHIPEPVKRINTGYYHSI 272
Query: 283 -LISGGELYTWGSNENGCLGIG---SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
L G +Y G +E+G LGI S ++ P+++Q P +PV V+CG HT ++E
Sbjct: 273 FLTENGLVYVCGESESGKLGIDINFSTQIM--PKQMQLP---NPVIYVACGGHHTMFLTE 327
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNFG--ENVKALQVSCGFNH 395
L G +S GQLG G +V +H P +++ G +N + ++SCG +H
Sbjct: 328 NNNLYCT-----------GSNSSGQLGLGTNVTELHTPKLLSQGALKNERISRISCGESH 376
Query: 396 TGALLE 401
T L E
Sbjct: 377 TAILTE 382
>gi|15238303|ref|NP_199029.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|9757959|dbj|BAB08447.1| TMV resistance protein-like [Arabidopsis thaliana]
gi|332007389|gb|AED94772.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1073
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 161/373 (43%), Gaps = 71/373 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G + P + + S+ +ACG HT +T TG +Y G ++
Sbjct: 296 WGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNA 355
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P RISG + ++ +S G H++ IT G+L+ +G + G LG G
Sbjct: 356 GLLGHGTDVSHWI-PKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHG 414
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
K + + P +VE LSG+ T A G + A+ GK+ +WG G
Sbjct: 415 DK--ETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKS 472
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + PRL SA ID G
Sbjct: 473 RLGHGDKE-------------PRLKPTCV-------------SALIDHTFHRVACG---- 502
Query: 268 DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
H+ L + G++YT GS G LG + D P V+ ++ V++++
Sbjct: 503 ---------HSLTVGLTTSGKVYTMGSTVYGQLGNPNADG-KLPCLVEDKLTKDCVEEIA 552
Query: 328 CGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG H A + S ++ TWG G + G+LGHG+ D PT+V+ +
Sbjct: 553 CGAYHVAVLTSRNEVFTWGKGAN------------GRLGHGDVEDRKAPTLVDALKERHV 600
Query: 387 LQVSCGFNHTGAL 399
++CG N T A+
Sbjct: 601 KNIACGSNFTAAI 613
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 119/274 (43%), Gaps = 64/274 (23%)
Query: 142 GELYMWGK---------NSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
G++Y+WG+ ++ +G LG ++ +IP P + + + A G + +
Sbjct: 229 GDVYIWGEVLCENVTKFGADKNIGYLGSRSDVLIPKPLESNVVLDVH--HIACGVKHAAL 286
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
V+ G+V +WG GRLGHG + G P+LI+ L + A G H+
Sbjct: 287 VSRQGEVFTWGEASGGRLGHGMGKDVTG---------PQLIESLAATSIDFVACGEFHTC 337
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH-S 310
+ G +Y +GD G++ G LG G+ DV H
Sbjct: 338 AVTMTGEIYTWGD----------------------------GTHNAGLLGHGT-DVSHWI 368
Query: 311 PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 369
P+R+ GP + VSCG HTA I S G++ T+G GTF G LGHG+
Sbjct: 369 PKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFG----DGTF--------GVLGHGDK 416
Query: 370 VDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
+P V ++ + V+CG H A++E +
Sbjct: 417 ETVFYPREVESLSGLRTIAVACGVWHAAAIVEVI 450
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 134/321 (41%), Gaps = 78/321 (24%)
Query: 102 QLGISENIGY--------SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
+ G +NIGY +PL S + +V I+ G H++ ++ GE++ WG+ S G
Sbjct: 244 KFGADKNIGYLGSRSDVLIPKPLE-SNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGG 302
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGH 211
+LG G K + P +E L+ A G + AVT G++ +WG G +G LGH
Sbjct: 303 RLGHG--MGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGH 360
Query: 212 GQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G + S + P+ I LEG+++ + G H+A I G+++ FGD
Sbjct: 361 GTD---------VSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTF--- 408
Query: 271 LFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 330
G LG G + + P V+ S V+CG
Sbjct: 409 ---------------------------GVLGHGDKETVFYPREVES-LSGLRTIAVACGV 440
Query: 331 KHTAAISE------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
H AAI E GK+ TWG DG S +LGHG+ + PT V
Sbjct: 441 WHAAAIVEVIVTHSSSSVSSGKLFTWG----------DGDKS--RLGHGDKEPRLKPTCV 488
Query: 379 NFGENVKALQVSCGFNHTGAL 399
+ + +V+CG + T L
Sbjct: 489 SALIDHTFHRVACGHSLTVGL 509
>gi|125550526|gb|EAY96235.1| hypothetical protein OsI_18130 [Oryza sativa Indica Group]
Length = 994
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 156/373 (41%), Gaps = 71/373 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E P + + ++ +ACG HT +T TG +Y G ++
Sbjct: 178 WGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNV 237
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + G+ + P RISG V +S G H++ IT G+L+ +G S G LG G
Sbjct: 238 GLLGHGTDAGHWI-PKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 296
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-----------TGGGKVLSWGAGGSG 207
+ I P +VE LSG+ T A G + A+ GK+ +WG G
Sbjct: 297 NLTS--ISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKH 354
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + S L P + L A G + C+ +G+V G+ +V
Sbjct: 355 RLGHGDKESRL---------KPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGN-SV 404
Query: 268 DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
L + R P L+ +R+ G V QV+
Sbjct: 405 YGQLGNPNSDGRLPCLVE--------------------------DRIAGEH----VLQVA 434
Query: 328 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG H A ++ ++ TWG G + G+LGHG+ D PT V ++
Sbjct: 435 CGSYHVAVLTGRSEVFTWGKGAN------------GRLGHGDIEDRKVPTQVEALKDRAV 482
Query: 387 LQVSCGFNHTGAL 399
++CG N T A+
Sbjct: 483 RHIACGANFTAAI 495
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 128/301 (42%), Gaps = 70/301 (23%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H++ +T +G+++ WG++S G+LG G + V P VE
Sbjct: 146 KPLE-SRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV--HPRLVES 202
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG ++ + P+
Sbjct: 203 LAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDA---------GHWIPKR 253
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
I L+G+ V + G H+A I G+++ FGD +
Sbjct: 254 ISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSF----------------------- 290
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------------ 338
G LG G++ + P+ V+ S V+CG HTAAI E
Sbjct: 291 -------GVLGHGNLTSISCPKEVES-LSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSA 342
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
GK+ TWG G H +LGHG+ + PT V + +V+CG + T
Sbjct: 343 GKLFTWGDGDKH------------RLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVC 390
Query: 399 L 399
L
Sbjct: 391 L 391
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 114/274 (41%), Gaps = 65/274 (23%)
Query: 142 GELYMWGK---------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
G++Y+WG+ S+ + +K ++P P + + ++ G + V
Sbjct: 112 GDVYVWGEVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVY--HVDCGVRHAALV 169
Query: 193 TGGGKVLSWGAGGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
T G V +WG GRLGHG +E S+ PRL++ L V A G H+
Sbjct: 170 TRNGDVFTWGEDSGGRLGHGTREDSV----------HPRLVESLAACNVDFVACGEFHTC 219
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH-S 310
+ G +Y +GD G++ G LG G+ D H
Sbjct: 220 AVTTTGELYTWGD----------------------------GTHNVGLLGHGT-DAGHWI 250
Query: 311 PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 369
P+R+ G PV VSCG HTA I S G++ T+G G S G LGHGN
Sbjct: 251 PKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDG------------SFGVLGHGNL 298
Query: 370 VDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
P V +K + V+CG HT A++E +
Sbjct: 299 TSISCPKEVESLSGLKTIAVACGVWHTAAIVEVI 332
>gi|42568678|ref|NP_200895.2| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|10176914|dbj|BAB10107.1| unnamed protein product [Arabidopsis thaliana]
gi|332010005|gb|AED97388.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 445
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 138/303 (45%), Gaps = 40/303 (13%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG GD GRLG G S + P + FE+HS++ +A GG H++ LT G V+ G FG
Sbjct: 123 IWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFG 182
Query: 102 QLGISENIGYSLEPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + L P R+ ++ I+T H++AIT GELYMWG+
Sbjct: 183 ALG-HKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGP 241
Query: 161 AAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+ +P+KV+ L+ + GF ++A+T G++ +WGA + LG G
Sbjct: 242 GRGPNEGGGLSVPSKVKALTVPVASVSCGGF-FTMALTKEGQLWNWGANSNYELGRGD-- 298
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD----------- 264
+ + P + LEGV++ A G HS + E G+V +G
Sbjct: 299 -------NLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSL 351
Query: 265 -----------RAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGI-GSIDVLHSPE 312
A K++F + ++ GGEL+ WG+ ++ LG+ G ++ +P
Sbjct: 352 RNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPV 411
Query: 313 RVQ 315
V
Sbjct: 412 EVN 414
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 139/310 (44%), Gaps = 64/310 (20%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA--- 182
+ IS G HS +T+DG+L++WGK G+LG G++ + +P L+ +F + +
Sbjct: 104 IGISCGLFHS-GLTIDGDLWIWGKGDGGRLGFGQENSVFVP------NLNPLFEEHSIRC 156
Query: 183 -ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
ALG SVA+T G V +WG GG G LGH T E PR + + K+
Sbjct: 157 IALGGLHSVALTHQGDVFTWGYGGFGALGHKV---------YTRELVPRRVDDSWDCKIS 207
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVD-------KMLFQEGNHARRPS------------ 282
A H+A I E+G +Y++G D EG PS
Sbjct: 208 AIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASV 267
Query: 283 ---------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES-PVDQVSCGWKH 332
L G+L+ WG+N N LG G D L E + P E + Q++CG H
Sbjct: 268 SCGGFFTMALTKEGQLWNWGANSNYELGRG--DNLGGWEPMPVPSLEGVRITQIACGGYH 325
Query: 333 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 391
+ A++ EGK+L+WG GG GQLG + + PT + + K + ++
Sbjct: 326 SLALTEEGKVLSWGHGGH------------GQLGSSSLRNQKVPTEIEALADKKIVFIAS 373
Query: 392 GFNHTGALLE 401
G + + A+ +
Sbjct: 374 GGSSSAAITD 383
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 121/309 (39%), Gaps = 76/309 (24%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPT------------------KVECLSGIFTKQAAL 184
+L+ WG+ ++GQLG G + ++ P P +++ S F +
Sbjct: 49 QLFSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGISC 108
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G S +T G + WG G GRLG GQE+S+ + P L E ++ A
Sbjct: 109 GLFHS-GLTIDGDLWIWGKGDGGRLGFGQENSV---------FVPNLNPLFEEHSIRCIA 158
Query: 245 AGFLHSACIDENGRVYIFG-----------------DRAVDK-------MLFQEGNHARR 280
G LHS + G V+ +G R VD + G H
Sbjct: 159 LGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTA- 217
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDV-------LHSPERVQGPFSESPVDQVSCGWKHT 333
++ GELY WG E L P +V+ PV VSCG T
Sbjct: 218 -AITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKA--LTVPVASVSCGGFFT 274
Query: 334 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
A++ EG++ W WG +S +LG G+++ P V E V+ Q++CG
Sbjct: 275 MALTKEGQL--WNWGA----------NSNYELGRGDNLGGWEPMPVPSLEGVRITQIACG 322
Query: 393 FNHTGALLE 401
H+ AL E
Sbjct: 323 GYHSLALTE 331
>gi|292628008|ref|XP_694032.3| PREDICTED: secretion-regulating guanine nucleotide exchange factor
[Danio rerio]
Length = 448
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 166/392 (42%), Gaps = 56/392 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVC-SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LG G+ E + P S ++ ++A+ GG H+ ++++G + G N G
Sbjct: 67 WGANSYGQLGQGNAEDQAEPRRAESGLQEEQIRAVTGGGGHSALISDSGELLVCGQNHKG 126
Query: 102 QLGISENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + + + + G + V Q+S G+ + +T DG + G N+ GQLG+ +
Sbjct: 127 QLGLGHTLEIMTFQTCPLPGFGR-VQQVSCGWDFTIILTGDGLVLACGSNAFGQLGVSAE 185
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P ++ T AA G ++A T G V WG G S +
Sbjct: 186 KTHSAE-PLLLKSFHEPVTSVAA-GLRHALASTASGCVYQWGTGLSSHAKRMLNPQPVPS 243
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR--------------- 265
S+ E P L+ V + AG H AC+ NG V+++G
Sbjct: 244 HLSSKE--PCLVPGFAHVTTQKVIAGSAHCACLTVNGDVFLWGSNKHGQLISGSLFLPLP 301
Query: 266 -AVDKMLFQEGN----HARRPSLIS---GGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
A+D+ + Q+ H+ L++ G ++TWG + G LG HS E+
Sbjct: 302 VALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSNYGQLG----QTDHSMEKQSSD 357
Query: 318 --FSESPVD--------QVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
SPV+ Q+SCG +H A+ G++ +WGW + G G G
Sbjct: 358 EHLVRSPVEVKALFGATQISCGSEHNLAVVGGRVFSWGW------------NEHGMCGDG 405
Query: 368 NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ D P + + AL + CG H+ AL
Sbjct: 406 SLQDITQPQPIPALADAVALLIGCGAGHSMAL 437
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 149/343 (43%), Gaps = 53/343 (15%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRI-SGLKKEVVQISTGYH-HSSAITVDGELYMWGK 149
+Y G N +GQLG N EP R SGL++E ++ TG HS+ I+ GEL + G+
Sbjct: 64 LYTWGANSYGQLG-QGNAEDQAEPRRAESGLQEEQIRAVTGGGGHSALISDSGELLVCGQ 122
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIF--TKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
N GQLGLG + I T C F +Q + G++ ++ +TG G VL+ G+ G
Sbjct: 123 NHKGQLGLG----HTLEIMTFQTCPLPGFGRVQQVSCGWDFTIILTGDGLVLACGSNAFG 178
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---- 263
+LG E T P L+K V AAG H+ +G VY +G
Sbjct: 179 QLGVSAE--------KTHSAEPLLLKSFHE-PVTSVAAGLRHALASTASGCVYQWGTGLS 229
Query: 264 ---DRAVDKMLFQEGNHARRPSLISG----------------------GELYTWGSNENG 298
R ++ ++ P L+ G G+++ WGSN++G
Sbjct: 230 SHAKRMLNPQPVPSHLSSKEPCLVPGFAHVTTQKVIAGSAHCACLTVNGDVFLWGSNKHG 289
Query: 299 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDG 357
L GS+ + + + V V GW H A +E G++ TWG ++G +
Sbjct: 290 QLISGSLFLPLPVALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWG-RSNYGQLGQTD 348
Query: 358 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
HS Q + +++ + V A Q+SCG H A++
Sbjct: 349 HSMEKQ----SSDEHLVRSPVEVKALFGATQISCGSEHNLAVV 387
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 21/149 (14%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVC--SAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
LWG+ +G+L GSL PV S + + + G H + TE+G V+ G ++
Sbjct: 282 LWGSNKHGQLISGSLFLPL-PVALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSN 340
Query: 100 FGQLGISENIGYSLE-----------PLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
+GQLG ++ +S+E P+ + L QIS G H+ A+ V G ++ WG
Sbjct: 341 YGQLGQTD---HSMEKQSSDEHLVRSPVEVKALFG-ATQISCGSEHNLAV-VGGRVFSWG 395
Query: 149 KNSNGQLGLG--KKAAKVIPIPTKVECLS 175
N +G G G + + PIP + ++
Sbjct: 396 WNEHGMCGDGSLQDITQPQPIPALADAVA 424
>gi|321471075|gb|EFX82049.1| hypothetical protein DAPPUDRAFT_210805 [Daphnia pulex]
Length = 510
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 135/312 (43%), Gaps = 49/312 (15%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG S +P + K +K LA G G H L +++G +Y G N + QLG +
Sbjct: 30 GCLGLGDTASALQPRKIESLCKKKIKGLAYGSGLHLLAFSDSGELYTWGYNTYSQLG-NG 88
Query: 108 NIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
N ++L P +SG+ K V+Q+ G HH A+T +GE++ WG+N+ GQ G G +
Sbjct: 89 NTNHTLTPSLVSGVLAGKTVIQVGCGNHHCLALTSEGEVFAWGQNNGGQCGSGTTTGQ-- 146
Query: 166 PIPTKVEC-LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
+P +V + G A G S+A+ G + WG G+G LG G +
Sbjct: 147 SVPRRVTSGIGGHKVVAIACGQLTSMALLDDGDLYGWGYNGNGELGIGNNN--------- 197
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
+++ P + L V + GF H C+ +L
Sbjct: 198 NQHNPVRVSNLHKVFITQIVCGFAH--CL----------------------------ALT 227
Query: 285 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKIL 342
GELY WG+N G LG G H + P V+ +C H +A +GKI
Sbjct: 228 DQGELYAWGANSYGQLGTG-YKTHHLSPVIVAPELGKAVEIAACHLSHISAAMFHDGKIF 286
Query: 343 TWGWGGSHGTFS 354
WG H FS
Sbjct: 287 MWGHCRGHSIFS 298
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 143/326 (43%), Gaps = 60/326 (18%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGY-HHSSA 137
G+ + +T VYA G N G LG+ + +L+P +I L KK++ ++ G H A
Sbjct: 9 GSEVIMVTVDDDVYAMGCNSSGCLGLGDTAS-ALQPRKIESLCKKKIKGLAYGSGLHLLA 67
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+ GELY WG N+ QLG G + P L+G Q G +A+T G+
Sbjct: 68 FSDSGELYTWGYNTYSQLGNGNTNHTLTPSLVS-GVLAGKTVIQVGCGNHHCLALTSEGE 126
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDEN 256
V +WG G+ G G +T + PR + + G KV A G L S
Sbjct: 127 VFAWGQNNGGQCGSGT---------TTGQSVPRRVTSGIGGHKVVAIACGQLTSM----- 172
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
+L+ G+LY WG N NG LGIG+ + H+P RV
Sbjct: 173 -------------------------ALLDDGDLYGWGYNGNGELGIGNNNNQHNPVRVSN 207
Query: 317 PFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
+ + Q+ CG+ H A++ +G++ W G +S GQLG G ++ P
Sbjct: 208 -LHKVFITQIVCGFAHCLALTDQGELYAW------------GANSYGQLGTGYKTHHLSP 254
Query: 376 TIVNFGENVKALQV-SCGFNHTGALL 400
IV E KA+++ +C +H A +
Sbjct: 255 VIVA-PELGKAVEIAACHLSHISAAM 279
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 95/239 (39%), Gaps = 46/239 (19%)
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK-IAAAG 246
+ + VT V + G SG LG G +S L PR I+ L K+K +A
Sbjct: 11 EVIMVTVDDDVYAMGCNSSGCLGLGDTASAL---------QPRKIESLCKKKIKGLAYGS 61
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG-------------------- 286
LH ++G +Y +G ++ NH PSL+SG
Sbjct: 62 GLHLLAFSDSGELYTWGYNTYSQLGNGNTNHTLTPSLVSGVLAGKTVIQVGCGNHHCLAL 121
Query: 287 ---GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG-WKHTAAISEGKIL 342
GE++ WG N G G G+ P RV V ++CG A + +G +
Sbjct: 122 TSEGEVFAWGQNNGGQCGSGTTTGQSVPRRVTSGIGGHKVVAIACGQLTSMALLDDGDLY 181
Query: 343 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
WG+ G+ G+LG GN+ + +P V+ V Q+ CGF H AL +
Sbjct: 182 GWGYNGN------------GELGIGNNNNQHNPVRVSNLHKVFITQIVCGFAHCLALTD 228
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G LG+G+ ++ PV S K + + CG AH L LT+ G +YA G N +GQ
Sbjct: 183 WGYNGNGELGIGNNNNQHNPVRVSNLHKVFITQIVCGFAHCLALTDQGELYAWGANSYGQ 242
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWG 148
LG + L P+ ++ + V+I+ + H S+A+ DG+++MWG
Sbjct: 243 LGTGYKT-HHLSPVIVAPELGKAVEIAACHLSHISAAMFHDGKIFMWG 289
>gi|428177727|gb|EKX46605.1| hypothetical protein GUITHDRAFT_48927, partial [Guillardia theta
CCMP2712]
Length = 316
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 113/228 (49%), Gaps = 11/228 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+ G G+ E P + + +++CGGAHT+ ++E G V++ GL GQ
Sbjct: 53 WGENKYGQCGTGTQEQTEHPTFVGSLFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQ 112
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + + ++V+ ++ G H+ + GELY G N NGQ G+G +
Sbjct: 113 LGHGSRDNLTTPSVVQAMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKNGQCGVGSTSD 172
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P VE L G + A+ G + VTGGG+V ++G+G G+LGHG +
Sbjct: 173 --LLSPQCVESLRGEGVQHASCGAGHTAVVTGGGEVFTFGSGSCGQLGHGDCQDL----- 225
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
PR + L G+ + + A G ++ C + RV+ FG V ++
Sbjct: 226 ----SMPRRVGALVGIVMSMVACGEEYTVCAAFDHRVFGFGLNNVGQL 269
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 131/300 (43%), Gaps = 57/300 (19%)
Query: 100 FGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+GQ G + E + S + + ++V ++ G HS+ + GE+ WG+N GQ G
Sbjct: 4 WGQAGSAVGEQVSSSTPRMLKKAMGRQVRDVACGLVHSAMVMGSGEVLCWGENKYGQCGT 63
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + PT V L G+ + G +V V+ G+V SWG G +G+LGHG ++
Sbjct: 64 GTQ--EQTEHPTFVGSLFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNL 121
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
TP +++ + G V G H+ +
Sbjct: 122 T---------TPSVVQAMRGRDVLAVTCGVGHTVIV------------------------ 148
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
++GGELYT G N+NG G+GS L SP+ V+ E V SCG HTA ++
Sbjct: 149 ------LAGGELYTCGWNKNGQCGVGSTSDLLSPQCVESLRGEG-VQHASCGAGHTAVVT 201
Query: 338 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
G++ T+G G S GQLGHG+ D P V + V+CG +T
Sbjct: 202 GGGEVFTFGSG------------SCGQLGHGDCQDLSMPRRVGALVGIVMSMVACGEEYT 249
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 125/297 (42%), Gaps = 35/297 (11%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
++ +ACG H+ + +G V G N +GQ G S + +S G
Sbjct: 31 VRDVACGLVHSAMVMGSGEVLCWGENKYGQCGTGTQEQTEHPTFVGSLFGVACMSVSCGG 90
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
H+ ++ DG ++ WG +NGQLG G + + P+ V+ + G G +V V
Sbjct: 91 AHTVVVSEDGRVFSWGLGANGQLGHGSR--DNLTTPSVVQAMRGRDVLAVTCGVGHTVIV 148
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
GG++ + G +G+ G G S +L +P+ ++ L G V+ A+ G H+A
Sbjct: 149 LAGGELYTCGWNKNGQCGVGSTSDLL---------SPQCVESLRGEGVQHASCGAGHTAV 199
Query: 253 IDENGRVYIFGDRAVDKM---LFQEGNHARRP--------SLISGGELYT---------- 291
+ G V+ FG + ++ Q+ + RR S+++ GE YT
Sbjct: 200 VTGGGEVFTFGSGSCGQLGHGDCQDLSMPRRVGALVGIVMSMVACGEEYTVCAAFDHRVF 259
Query: 292 -WGSNENGCLGIGSIDVLHSPERVQGPF-SESPVDQVSCGWKHTAAIS-EGKILTWG 345
+G N G LG S + E Q F E V+ C A++ G + WG
Sbjct: 260 GFGLNNVGQLGASSTSHPYLSEPRQMEFLKEEEVELCKCNQSEVIALTRRGALRAWG 316
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 80/190 (42%), Gaps = 46/190 (24%)
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
GQ S +G S TPR++K+ G +V+ A G +HSA +
Sbjct: 5 GQAGSAVG--EQVSSSTPRMLKKAMGRQVRDVACGLVHSAMV------------------ 44
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 331
+ GE+ WG N+ G G G+ + P V F + + VSCG
Sbjct: 45 ------------MGSGEVLCWGENKYGQCGTGTQEQTEHPTFVGSLFGVACMS-VSCGGA 91
Query: 332 HTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 390
HT +SE G++ +WG G + GQLGHG+ + P++V L V+
Sbjct: 92 HTVVVSEDGRVFSWGLGAN------------GQLGHGSRDNLTTPSVVQAMRGRDVLAVT 139
Query: 391 CGFNHTGALL 400
CG HT +L
Sbjct: 140 CGVGHTVIVL 149
>gi|156396598|ref|XP_001637480.1| predicted protein [Nematostella vectensis]
gi|156224592|gb|EDO45417.1| predicted protein [Nematostella vectensis]
Length = 753
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 174/351 (49%), Gaps = 36/351 (10%)
Query: 43 WGNGDYGRLGLGSL---ESRWRPVVCSAFEKHSLKAL--ACGGAHTLFLTETGCVYATGL 97
WG GRLG G L E + P H +K L ACG HTL L G VY+ G
Sbjct: 54 WGKSHKGRLGHGDLIEEEGKSMPFRVEILHMHRIKVLSVACGIEHTLALCRDG-VYSWGS 112
Query: 98 NDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+++GQLG + ++ P+ ++ L K+ + + G++HS A++ D ++Y WG +GQLG
Sbjct: 113 SEYGQLGQGDTQQHT-RPVYVTELSDKKCIAVVCGHYHSLALSADQQVYSWGWGVHGQLG 171
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
L + +P+ V LSG F Q A G+ + +T GKV ++G G G+LG
Sbjct: 172 LDSIEDAL--LPSHVTSLSGAFVTQLAAGYSHTAVLTTEGKVYTFGGGLYGQLG------ 223
Query: 217 ILGFLRSTSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE- 274
L +TS+ T P+L++ LE ++ + G + + +++ +G R+ F
Sbjct: 224 ----LGTTSKQTLPQLVQALEKDRIYLICCGSFETVAVSSEQKLFNWG-RSPHYFRFHMI 278
Query: 275 --GNHARRPSLISGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWK 331
GN ++ +++TWG N++G LG S+D L P VQ +ES V S G +
Sbjct: 279 HCGN-WHYLAVTEARQVFTWGFNDHGQLGHSTSMDHLLFPTVVQK-LNESFVATASVGAE 336
Query: 332 HTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
+ A+ + G++ WG S + HSS ++ DVD+ P + +F
Sbjct: 337 FSVAMDATGQVWVWGRSDSGQSL----HSSSEEI---YDVDWKLPDLSHFS 380
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 140/318 (44%), Gaps = 45/318 (14%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLEPLRISGL---KKEVVQIS 129
L+CG HT ++ +G VY G + G+LG + E G S+ P R+ L + +V+ ++
Sbjct: 35 LSCGQHHTAVVSASGDVYTWGKSHKGRLGHGDLIEEEGKSM-PFRVEILHMHRIKVLSVA 93
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G H+ A+ DG +Y WG + GQLG G P+ V LS G S
Sbjct: 94 CGIEHTLALCRDG-VYSWGSSEYGQLGQGDTQQHTRPV--YVTELSDKKCIAVVCGHYHS 150
Query: 190 VAVTGGGKVLSWGAGGSGRLG-HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
+A++ +V SWG G G+LG E ++L P + L G V AAG+
Sbjct: 151 LALSADQQVYSWGWGVHGQLGLDSIEDALL----------PSHVTSLSGAFVTQLAAGYS 200
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSID-V 307
H+A + G+VY FG ++ + P L+ E + + GS + V
Sbjct: 201 HTAVLTTEGKVYTFGGGLYGQLGLGTTSKQTLPQLVQALE-----KDRIYLICCGSFETV 255
Query: 308 LHSPERVQGPFSESP----VDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGG 362
S E+ + SP + CG H A++E + + TWG+ G
Sbjct: 256 AVSSEQKLFNWGRSPHYFRFHMIHCGNWHYLAVTEARQVFTWGFNDH------------G 303
Query: 363 QLGHGNDVDY-IHPTIVN 379
QLGH +D+ + PT+V
Sbjct: 304 QLGHSTSMDHLLFPTVVQ 321
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 83/218 (38%), Gaps = 53/218 (24%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-- 242
G + V+ G V +WG GRLGHG + + P ++ L ++K+
Sbjct: 38 GQHHTAVVSASGDVYTWGKSHKGRLGHG------DLIEEEGKSMPFRVEILHMHRIKVLS 91
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGI 302
A G H+ + +G +Y+WGS+E G LG
Sbjct: 92 VACGIEHTLALCRDG-------------------------------VYSWGSSEYGQLGQ 120
Query: 303 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 361
G P V S+ V CG H+ A+S + ++ +WGWG
Sbjct: 121 GDTQQHTRPVYV-TELSDKKCIAVVCGHYHSLALSADQQVYSWGWG------------VH 167
Query: 362 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
GQLG + D + P+ V Q++ G++HT L
Sbjct: 168 GQLGLDSIEDALLPSHVTSLSGAFVTQLAAGYSHTAVL 205
>gi|159038541|ref|YP_001537794.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157917376|gb|ABV98803.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 561
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 147/362 (40%), Gaps = 57/362 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV ++ A+A G H+L +T TG V A GLN GQ
Sbjct: 117 WGANSSGQLGDGTTTPRSTPVAVDLPAGTTVTAVAAGDRHSLAVTSTGTVLAWGLNVTGQ 176
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
L S P+ + V ++ G HS A+T G + WG NS+GQLG G
Sbjct: 177 LYDGTTTTNSSTPIVVDLPAGTTVTAVAAGNAHSLALTSAGTVLAWGANSSGQLGDGTTT 236
Query: 162 AKVIPIPTKVECLSG-IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P+ V+ +G + AA S+AVT G +L+WGA +G+LG G
Sbjct: 237 PRSTPV--AVDLPAGTTISTIAASSSSHSLAVTSTGTMLAWGANFTGQLGDGTI------ 288
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T+ TP + G V A G HS +
Sbjct: 289 ---TNRSTPVAVDLPAGTTVTAVATGSGHSLAV--------------------------- 318
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEG 339
S G + WG N +G LG GS +P V P + V V+ G H+ A+ S G
Sbjct: 319 ---TSTGTMLAWGGNGSGQLGDGSTTSSSTPVAVDLPAGTT-VTAVAGGAGHSLALTSTG 374
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+L WG+ S GQLG G + P + + ++ G H+ A+
Sbjct: 375 TMLAWGFNTS------------GQLGDGTTSNRSTPIATDLPADTTITAIAGGSFHSLAV 422
Query: 400 LE 401
+
Sbjct: 423 VP 424
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 142/360 (39%), Gaps = 57/360 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +LG G+ +R PV ++ A+A G H+L +T G V A G N GQ
Sbjct: 65 WGDNAESQLGDGTTTNRSTPVTVDLPADTTITAVAAGQGHSLAVTSAGTVLAWGANSSGQ 124
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG S P+ + V ++ G HS A+T G + WG N GQL G
Sbjct: 125 LGDGTTTPRS-TPVAVDLPAGTTVTAVAAGDRHSLAVTSTGTVLAWGLNVTGQLYDGTTT 183
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P V+ +G A G S+A+T G VL+WGA SG+LG G
Sbjct: 184 TNSS-TPIVVDLPAGTTVTAVAAGNAHSLALTSAGTVLAWGANSSGQLGDGT-------- 234
Query: 222 RSTSEYTPRLIKELEG-VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T TP + G IAA+ HS +
Sbjct: 235 -TTPRSTPVAVDLPAGTTISTIAASSSSHSLAV--------------------------- 266
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEG 339
S G + WG+N G LG G+I +P V P + V V+ G H+ A+ S G
Sbjct: 267 ---TSTGTMLAWGANFTGQLGDGTITNRSTPVAVDLPAGTT-VTAVATGSGHSLAVTSTG 322
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+L WG GS GQLG G+ P V+ V+ G H+ AL
Sbjct: 323 TMLAWGGNGS------------GQLGDGSTTSSSTPVAVDLPAGTTVTAVAGGAGHSLAL 370
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 107/287 (37%), Gaps = 55/287 (19%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG N+ QLG G + P+ V+ + A G S+AVT G VL+WGA S
Sbjct: 65 WGDNAESQLGDGTTTNRSTPV--TVDLPADTTITAVAAGQGHSLAVTSAGTVLAWGANSS 122
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG G +T TP + G V AAG HS + G V +G
Sbjct: 123 GQLGDGT---------TTPRSTPVAVDLPAGTTVTAVAAGDRHSLAVTSTGTVLAWGLNV 173
Query: 267 VDKM------------------------LFQEGNHARRPSLISGGELYTWGSNENGCLGI 302
++ GN A +L S G + WG+N +G LG
Sbjct: 174 TGQLYDGTTTTNSSTPIVVDLPAGTTVTAVAAGN-AHSLALTSAGTVLAWGANSSGQLGD 232
Query: 303 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSG 361
G+ +P V P + + H+ A+ S G +L WG F+
Sbjct: 233 GTTTPRSTPVAVDLPAGTTISTIAASSSSHSLAVTSTGTMLAWG-----ANFT------- 280
Query: 362 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH------TGALLEY 402
GQLG G + P V+ V+ G H TG +L +
Sbjct: 281 GQLGDGTITNRSTPVAVDLPAGTTVTAVATGSGHSLAVTSTGTMLAW 327
>gi|52353612|gb|AAU44178.1| ptative chromosome condensation factor [Oryza sativa Japonica
Group]
Length = 917
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 156/373 (41%), Gaps = 71/373 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E P + + ++ +ACG HT +T TG +Y G ++
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + G+ + P RISG V +S G H++ IT G+L+ +G S G LG G
Sbjct: 161 GLLGHGTDAGHWI-PKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-----------TGGGKVLSWGAGGSG 207
+ I P +VE LSG+ T A G + A+ GK+ +WG G
Sbjct: 220 NLTS--ISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKH 277
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + S L P + L A G + C+ +G+V G+ +V
Sbjct: 278 RLGHGDKESRL---------KPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGN-SV 327
Query: 268 DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
L + R P L+ +R+ G V QV+
Sbjct: 328 YGQLGNPNSDGRLPCLVE--------------------------DRIAGEH----VLQVA 357
Query: 328 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG H A ++ ++ TWG G + G+LGHG+ D PT V ++
Sbjct: 358 CGSYHVAVLTGRSEVFTWGKGAN------------GRLGHGDIEDRKVPTQVEALKDRAV 405
Query: 387 LQVSCGFNHTGAL 399
++CG N T A+
Sbjct: 406 RHIACGANFTAAI 418
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 128/301 (42%), Gaps = 70/301 (23%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H++ +T +G+++ WG++S G+LG G + V P VE
Sbjct: 69 KPLE-SRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG ++ + P+
Sbjct: 126 LAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDA---------GHWIPKR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
I L+G+ V + G H+A I G+++ FGD +
Sbjct: 177 ISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSF----------------------- 213
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------------ 338
G LG G++ + P+ V+ S V+CG HTAAI E
Sbjct: 214 -------GVLGHGNLTSISCPKEVES-LSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSA 265
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
GK+ TWG G H +LGHG+ + PT V + +V+CG + T
Sbjct: 266 GKLFTWGDGDKH------------RLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVC 313
Query: 399 L 399
L
Sbjct: 314 L 314
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 115/276 (41%), Gaps = 69/276 (25%)
Query: 142 GELYMWGK---------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
G++Y+WG+ S+ + +K ++P P + + ++ G + V
Sbjct: 35 GDVYVWGEVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVY--HVDCGVRHAALV 92
Query: 193 TGGGKVLSWGAGGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
T G V +WG GRLGHG +E S+ PRL++ L V A G H+
Sbjct: 93 TRNGDVFTWGEDSGGRLGHGTREDSV----------HPRLVESLAACNVDFVACGEFHTC 142
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWG--SNENGCLGIGSIDVLH 309
+ + GELYTWG ++ G LG G+ D H
Sbjct: 143 AV------------------------------TTTGELYTWGDGTHNVGLLGHGT-DAGH 171
Query: 310 -SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
P+R+ G PV VSCG HTA I S G++ T+G G S G LGHG
Sbjct: 172 WIPKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDG------------SFGVLGHG 219
Query: 368 NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
N P V +K + V+CG HT A++E +
Sbjct: 220 NLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVI 255
>gi|297791865|ref|XP_002863817.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
lyrata]
gi|297309652|gb|EFH40076.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
lyrata]
Length = 1083
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 161/373 (43%), Gaps = 71/373 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G + P + + S+ +ACG HT +T TG +Y G ++
Sbjct: 301 WGEASGGRLGHGMGKDVTGPQLIESLAATSVDFVACGEFHTCAVTMTGEIYTWGDGTHNA 360
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P RISG + ++ +S G H++ IT G+L+ +G + G LG G
Sbjct: 361 GLLGHGTDVSHWI-PKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHG 419
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALG-----------FEQSVAVTGGGKVLSWGAGGSG 207
K + + P +VE LSG+ T A G QS + GK+ +WG G
Sbjct: 420 DK--ETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTQSTSSISSGKLFTWGDGDKS 477
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + S L P + SA ID G
Sbjct: 478 RLGHGDKESRL---------KPTCV-----------------SALIDHTFHRVACG---- 507
Query: 268 DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
H+ L + G++YT GS G LG + D P V+ + V++++
Sbjct: 508 ---------HSLTVGLTTSGKVYTMGSTVYGQLGNPNADG-KLPCLVEDKLIKDCVEEIA 557
Query: 328 CGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG H A + S ++ TWG G + G+LGHG+ D P++V+ +
Sbjct: 558 CGAYHVAVLTSRNEVFTWGKGAN------------GRLGHGDIEDRKAPSLVDTLKERHV 605
Query: 387 LQVSCGFNHTGAL 399
++CG N T A+
Sbjct: 606 KNIACGSNFTAAI 618
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 116/272 (42%), Gaps = 60/272 (22%)
Query: 142 GELYMWGK---NSNGQLGLGKKAAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G++Y+WG+ ++ + G K A V + IP +E + A G + V+
Sbjct: 234 GDVYIWGEVLCDNVAKFGAEKNATCVGSRSDVLIPKPLESNVVLDVHHIACGVRHAALVS 293
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V +WG GRLGHG + G P+LI+ L V A G H+ +
Sbjct: 294 RQGEVFTWGEASGGRLGHGMGKDVTG---------PQLIESLAATSVDFVACGEFHTCAV 344
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH-SPE 312
G +Y +GD G++ G LG G+ DV H P+
Sbjct: 345 TMTGEIYTWGD----------------------------GTHNAGLLGHGT-DVSHWIPK 375
Query: 313 RVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
R+ GP + VSCG HTA I S G++ T+G GTF G LGHG+
Sbjct: 376 RISGPLEGLQIASVSCGPWHTALITSTGQLFTFG----DGTF--------GVLGHGDKET 423
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
+P V ++ + V+CG H A++E +
Sbjct: 424 VFYPREVESLSGLRTIAVACGVWHAAAIVEVI 455
>gi|432863195|ref|XP_004070017.1| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Oryzias latipes]
Length = 397
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 174/407 (42%), Gaps = 82/407 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG YG+LG G E + P + S + ++ + GG HT +TE G V+ G N
Sbjct: 13 WGANSYGQLGQGHAEDQLVPRLSGVSELQTKVIRVVRGGGGHTAVITEGGEVFVCGQNHK 72
Query: 101 GQLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQLGI ++ + + P+ + V ++ G+ S +T G L G N+ GQLG+
Sbjct: 73 GQLGIGHCADIATFQICPI----FNQRVTDVACGWDFSLLLTEGGRLLACGSNAFGQLGV 128
Query: 158 GKKAAKVI-PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G+ + P+ +V I + A G S+AV G V W G+G H +
Sbjct: 129 GETVTHIADPLLVEVRFHEPIVS--VAAGLRHSLAVNDSGCVYQW---GNGLFSHVDDKE 183
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----LF 272
+ + S+ L+K AG H C+ E G ++++G +++ F
Sbjct: 184 MRTGDKCLSQKKSVLVK-----------AGSAHCVCLTEEGELFLWGSNKHEQLGTSESF 232
Query: 273 QEGNHARRPSLISG-------------------GELYTWGSNENGCLGIGSIDVLHSPER 313
R SL++G G ++TWG + G LG + D +PE
Sbjct: 233 LPSPTPLRRSLLNGEKVSNVWSGWSHIIAQTESGRVFTWGRGDYGQLGRPNSDS-QTPEE 291
Query: 314 VQGPF----SES-----PVD--------QVSCGWKHTAAISEGKILTWGWGGSHGTFSED 356
+ F S+S P + Q+SCG +H A+ ++L+WGW
Sbjct: 292 LLAGFITGTSQSRAVCCPAEVHVLRGATQISCGSEHNLAVVGDRLLSWGW---------- 341
Query: 357 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
+ G G+G + +HP +++ N++A+ V CG H+ A+ +
Sbjct: 342 --NEHGMCGNGFQTNVLHPGLIS---NLRAVLVGCGAGHSMAVCTRI 383
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 161/345 (46%), Gaps = 56/345 (16%)
Query: 91 CVYATGLNDFGQLGISENIGYSLEPL--RISG---LKKEVVQIST-GYHHSSAITVDGEL 144
C++ G N +GQLG G++ + L R+SG L+ +V+++ G H++ IT GE+
Sbjct: 9 CLHTWGANSYGQLG----QGHAEDQLVPRLSGVSELQTKVIRVVRGGGGHTAVITEGGEV 64
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSW 201
++ G+N GQLG+G A I T C IF ++ A G++ S+ +T GG++L+
Sbjct: 65 FVCGQNHKGQLGIGHCA----DIATFQIC--PIFNQRVTDVACGWDFSLLLTEGGRLLAC 118
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G+ G+LG G+ + + P L++ + AAG HS ++++G VY
Sbjct: 119 GSNAFGQLGVGETVTHIA--------DPLLVEVRFHEPIVSVAAGLRHSLAVNDSGCVYQ 170
Query: 262 FGD-----------RAVDKMLFQ------EGNHARRPSLISGGELYTWGSNENGCLGIGS 304
+G+ R DK L Q + A L GEL+ WGSN++ LG S
Sbjct: 171 WGNGLFSHVDDKEMRTGDKCLSQKKSVLVKAGSAHCVCLTEEGELFLWGSNKHEQLGT-S 229
Query: 305 IDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE-GKILTWGWG--GSHGTFSEDGHS- 359
L SP ++ + V V GW H A +E G++ TWG G G G + D +
Sbjct: 230 ESFLPSPTPLRRSLLNGEKVSNVWSGWSHIIAQTESGRVFTWGRGDYGQLGRPNSDSQTP 289
Query: 360 ----SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
+G G P V+ A Q+SCG H A++
Sbjct: 290 EELLAGFITGTSQSRAVCCPAEVHVLRG--ATQISCGSEHNLAVV 332
>gi|428164106|gb|EKX33145.1| hypothetical protein GUITHDRAFT_120666 [Guillardia theta CCMP2712]
Length = 606
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 174/404 (43%), Gaps = 81/404 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEK--HSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG +LG G +++ P + S + + + ++ G H + TG ++ GL D
Sbjct: 183 WGCSHNYQLGTGQYQAQPFPKLVSTLTRLGNGIIDVSYGADHGAAIDSTGKLFTWGLCDH 242
Query: 101 GQLGIS--ENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ +++ Y P R+ LK EV V ++ G + S+ I+ D +++ WG S GQLG
Sbjct: 243 GRLGLKSGKDVPY---PTRVDFLKDEVIVDVTCGMYSSACISHDMKVFTWGSGSKGQLGH 299
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+K+ + +P V L I Q ALG+E A++ G V +WG G G+LGHG
Sbjct: 300 VEKSDEW--LPRSVAALHHIPIVQVALGYEHMAALSLDGDVYTWGEGEHGQLGHGD---- 353
Query: 218 LGFLRSTSEYTP-RLIKELEGVKVKIA--------AAGFLHSACIDENGRVYIFGDRAVD 268
L S S TP +L+ ELE ++A A G + + + GR+ FG
Sbjct: 354 ---LNSCS--TPKKLLLELENTTGEVADVGSPVLLACGASVTLILTDYGRLISFGMSEFG 408
Query: 269 KMLFQEGNHARRPSLI------------------------SGGELYTWGSNENGCLGIGS 304
+ E A RP LI S G +YTWG G +G +
Sbjct: 409 ALGLGEKRLAARPHLITSRIMDKRRFVHLSAGDEHCAAVTSKGNVYTWGQGCFGAVGKPA 468
Query: 305 IDVLHSPERVQGPFS-ESPVDQ----VSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHS 359
+P + P+ E P+D+ SCG +T +S+
Sbjct: 469 RRAYSNPPDCRKPYKLELPLDKRACATSCGGNYTVILSK--------------------- 507
Query: 360 SGGQLGHGNDVDYIHPTIV---NFGENVKALQVSCGFNHTGALL 400
G L G+D I P + N +KA V CG H+GA+L
Sbjct: 508 DGCVLVLGDDSTEIRPMLYDESNPASVMKASSVLCGRYHSGAIL 551
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 146/343 (42%), Gaps = 58/343 (16%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPL-----RISGLKKEVVQISTGYHHSSAITVDGELYM 146
++A G + QLG + Y +P ++ L ++ +S G H +AI G+L+
Sbjct: 180 LFAWGCSHNYQLGTGQ---YQAQPFPKLVSTLTRLGNGIIDVSYGADHGAAIDSTGKLFT 236
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG +G+LGL K+ K +P PT+V+ L G S ++ KV +WG+G
Sbjct: 237 WGLCDHGRLGL--KSGKDVPYPTRVDFLKDEVIVDVTCGMYSSACISHDMKVFTWGSGSK 294
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD-- 264
G+LGH ++S E+ PR + L + + A G+ H A + +G VY +G+
Sbjct: 295 GQLGHVEKS---------DEWLPRSVAALHHIPIVQVALGYEHMAALSLDGDVYTWGEGE 345
Query: 265 ------------RAVDKMLFQEGN------HARRPSLISG-----------GELYTWGSN 295
K+L + N P L++ G L ++G +
Sbjct: 346 HGQLGHGDLNSCSTPKKLLLELENTTGEVADVGSPVLLACGASVTLILTDYGRLISFGMS 405
Query: 296 ENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTF 353
E G LG+G + P + + +S G +H AA+ S+G + TWG G F
Sbjct: 406 EFGALGLGEKRLAARPHLITSRIMDKRRFVHLSAGDEHCAAVTSKGNVYTWG----QGCF 461
Query: 354 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
G + + + N D P + + +A SCG N+T
Sbjct: 462 GAVGKPA--RRAYSNPPDCRKPYKLELPLDKRACATSCGGNYT 502
>gi|91201899|emb|CAJ74959.1| similar to chromosomal condensation regulatory protein [Candidatus
Kuenenia stuttgartiensis]
Length = 620
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 167/368 (45%), Gaps = 50/368 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ +S+ PV ++ A+ CGG H++ L G V+A G N G+
Sbjct: 179 WGLNEDGQLGDGTNDSQTTPVAVQINALTTITAVDCGGDHSMALDSLGRVWAWGYNGDGE 238
Query: 103 L--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
L G +EN P+ + L +++ IS G +S A++ DG + WG NS+GQLG G
Sbjct: 239 LGGGTTENNSNVPVPVPVPNL-TDIIAISAGGEYSIALSSDGSVLTWGANSDGQLGNGNT 297
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+PTK+ L K + G S+AVT G V +WG G++G+G++S+
Sbjct: 298 DQNS--VPTKISSLP--LMKGISAGEAHSLAVTEDGFVYAWGLNDEGQIGNGEKSADNPV 353
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
L P ++ L + A A F + ID GRV+ +G ++ ++
Sbjct: 354 LN------PVQVQGLTDIDAVCAGATFSLALGID--GRVWAWGLNDEGQLGDGTNTNSTT 405
Query: 281 P------------------SL-ISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
P SL I G++ +WG N+ G LG GS +P V G S
Sbjct: 406 PVEVTNLAKISAVACGSDHSLAIRNGKVKSWGLNDEGQLGDGSTRSSSAPLDVTG---LS 462
Query: 322 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
+ V+ G H+ AI S+G I WG G GQLG G + P ++
Sbjct: 463 DIVYVAAGESHSLAITSKGNIYVWGLNGD------------GQLGDGTNRSSRTPKTIDL 510
Query: 381 GENVKALQ 388
V A++
Sbjct: 511 NLGVTAVE 518
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 138/328 (42%), Gaps = 60/328 (18%)
Query: 104 GISENIGYSLEPLRISGLKKE--------VVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G G+S P R +G + + QIS G+ HS A+ +G+L+ WG N +GQL
Sbjct: 129 GTQPQPGFSPRP-RPTGTQPQPAPTPGVVTPQISGGWSHSLALDSEGKLWAWGLNEDGQL 187
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G ++ P+ ++ L+ I G + S+A+ G+V +WG G G LG G
Sbjct: 188 GDGTNDSQTTPVAVQINALTTITA--VDCGGDHSMALDSLGRVWAWGYNGDGELGGGTTE 245
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ I + I+A G +S + +G V +G + ++
Sbjct: 246 NNSNVPVPVPVPNLTDI-------IAISAGGE-YSIALSSDGSVLTWGANSDGQLGNGNT 297
Query: 276 NHARRPSLISG--------------------GELYTWGSNENGCLGIG---SIDVLHSPE 312
+ P+ IS G +Y WG N+ G +G G + + + +P
Sbjct: 298 DQNSVPTKISSLPLMKGISAGEAHSLAVTEDGFVYAWGLNDEGQIGNGEKSADNPVLNPV 357
Query: 313 RVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG + +D V G + A+ +G++ W W G + GQLG G + +
Sbjct: 358 QVQG---LTDIDAVCAGATFSLALGIDGRV--WAW----------GLNDEGQLGDGTNTN 402
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGAL 399
P V + A V+CG +H+ A+
Sbjct: 403 STTPVEVTNLAKISA--VACGSDHSLAI 428
>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 396
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 148/365 (40%), Gaps = 65/365 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LGLG+ E + V A E +++++ G ++L + + G ++ G N G
Sbjct: 10 WGSGEDGQLGLGTDEEKELASVVEALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGT 69
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
LG P + L ++VQ + G H A+ G Y WG N GQ G
Sbjct: 70 LGHPPETKTESTPSLVKSLASVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSK 129
Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
G+ + I IP + C + +Q A G SV +T G V +WG +
Sbjct: 130 DETGRPVRRDIVIPKR--CAPQLTVRQVAAGGTHSVVLTREGYVWTWG-----------Q 176
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
G ++ S P ++ LE V++ A G H+ + E+
Sbjct: 177 PWPPGDIKQIS--IPVRVQGLE--NVRLIAVGAFHNLALKED------------------ 214
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
G L+ WG+NE G LG G P VQG + VD + GW TA
Sbjct: 215 ------------GTLWAWGNNEYGQLGTGDTQPRSFPIPVQGLDDLTLVDIAAGGWHSTA 262
Query: 335 AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
+EG++ WG G HG G + + P VN +QVSCG
Sbjct: 263 LTNEGEVYGWG-RGEHGRLG---------FGDNDKSSKMLPQKVNLLAGEDIIQVSCGGT 312
Query: 395 HTGAL 399
H+ AL
Sbjct: 313 HSVAL 317
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 135/311 (43%), Gaps = 41/311 (13%)
Query: 40 AALWGNGDYGRLGL-GSLESRWRPVVCSAF------EKHSLKALACGGAHTLFLTETGCV 92
A WG +YG+ G S + RPV + +++ +A GG H++ LT G V
Sbjct: 112 AYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAPQLTVRQVAAGGTHSVVLTREGYV 171
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
+ +GQ +I P+R+ GL+ V I+ G H+ A+ DG L+ WG N
Sbjct: 172 WT-----WGQPWPPGDIKQISIPVRVQGLEN-VRLIAVGAFHNLALKEDGTLWAWGNNEY 225
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG G + PIP V+ L + A G S A+T G+V WG G GRLG G
Sbjct: 226 GQLGTGDTQPRSFPIP--VQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFG 283
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
+S+ P+ + L G + + G HS + +GR++ FG
Sbjct: 284 DNDK-------SSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFG--------- 327
Query: 273 QEGNHARRPSLISGGELYTWGSNENGCLGIGSID--VLHSPERVQGPFSESPVDQVSCGW 330
G+H R + G T G + I ++ H+ E G + V+CG
Sbjct: 328 -RGDHGR----LGYGRKVTTGQPLELPIDIPPLEGRFNHTDEEDDGKWI---AKHVACGG 379
Query: 331 KHTAAISEGKI 341
+HT AI E K
Sbjct: 380 RHTLAIVEWKF 390
>gi|348508280|ref|XP_003441682.1| PREDICTED: leucine-rich repeat and WD repeat-containing protein
KIAA1239-like [Oreochromis niloticus]
Length = 2697
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 155/368 (42%), Gaps = 79/368 (21%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+ G + S V K + CG HTLFL G V + G N GQ
Sbjct: 1688 WGDSSSGQFGPQAAPSPVSWTVPGVITK-----ICCGDRHTLFLNADGNVLSCGHNSQGQ 1742
Query: 103 LGISE----NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
LG + I +E L VV ++ G H A++ G ++ WG +GQLGL
Sbjct: 1743 LGRQKKKNGKIIAQVEAL------GSVVAMACGQDHCLAVSASGHVFSWGAGEDGQLGLL 1796
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P+KV I Q A G S+A+T GG V SWG G+LG G+E +
Sbjct: 1797 PTPSSS-HRPSKVPIPLPIPIIQVACGNSHSLALTKGGDVFSWGLNSHGQLGLGKEVPV- 1854
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
++TP +I L GV V AAG HS LF
Sbjct: 1855 -------QHTPVIICALAGVAVTQIAAGGTHS--------------------LF------ 1881
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSID------VLHSPERVQGPFSESPVDQVSCGWKH 332
L +Y G+N+ G LG+ +D + P P S V +SCG H
Sbjct: 1882 ----LTLADLVYCCGANKCGQLGVNRVDEKGRFNICMVP--ALRPLS---VSFISCGESH 1932
Query: 333 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 391
+A ++ +GK+ T+G G S GQLGH + + P +V G + A Q++C
Sbjct: 1933 SAVLTKDGKVYTFGDG------------SQGQLGHSTSANEVKPKLVA-GLDGPASQIAC 1979
Query: 392 GFNHTGAL 399
G +HT L
Sbjct: 1980 GRHHTLVL 1987
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 138/310 (44%), Gaps = 52/310 (16%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QIST 130
S+ A+ACG H L ++ +G V++ G + GQLG+ S P ++ + Q++
Sbjct: 1762 SVVAMACGQDHCLAVSASGHVFSWGAGEDGQLGLLPTPSSSHRPSKVPIPLPIPIIQVAC 1821
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G HS A+T G+++ WG NS+GQLGLGK+ V P + L+G+ Q A G S+
Sbjct: 1822 GNSHSLALTKGGDVFSWGLNSHGQLGLGKEVP-VQHTPVIICALAGVAVTQIAAGGTHSL 1880
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+T V GA G+LG + + + ++ L + V + G HS
Sbjct: 1881 FLTLADLVYCCGANKCGQLG-------VNRVDEKGRFNICMVPALRPLSVSFISCGESHS 1933
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHS 310
A + ++G+VY FGD + ++ + +P L++G
Sbjct: 1934 AVLTKDGKVYTFGDGSQGQLGHSTSANEVKPKLVAG------------------------ 1969
Query: 311 PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+ GP S Q++CG HT + GS G G + GQ G+G++
Sbjct: 1970 ---LDGPAS-----QIACGRHHTLVL-----------GSSGQLWAFGSGAKGQTGNGHND 2010
Query: 371 DYIHPTIVNF 380
+ PT+V F
Sbjct: 2011 SCLTPTLVQF 2020
>gi|354465912|ref|XP_003495420.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Cricetulus griseus]
Length = 1136
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 169/385 (43%), Gaps = 57/385 (14%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+ G VYA G N+ GQLG+ + + + K + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDKGSVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPKDNIKQL 183
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G + G+
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIP----HEVTVGKPISWISCGYYH 239
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG + I + +P+ + + +++A G
Sbjct: 240 SAFVTVDGELYTFGEPENGKLGLPNQLLI-------NHRSPQRVLGIPEKVIQVACGG-- 290
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVL 308
G + D+ V Y +G + G LG+G+
Sbjct: 291 --------GHTVVLTDKVV----------------------YAFGLGQFGQLGLGTFLFE 320
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
S +V + + +SCG HTA +++ G + T+G G HG LG
Sbjct: 321 TSEPKVIERIKDQKISYISCGENHTALMTDIGLMYTFG-DGRHGKLG---------LGME 370
Query: 368 NDVDYIHPTIVNFGENVKALQVSCG 392
N + PT+ + ++CG
Sbjct: 371 NFTNQFFPTLCSNFLRFTVQLIACG 395
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 170/379 (44%), Gaps = 60/379 (15%)
Query: 48 YGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
+G GLG +R P V + K +L + +TG V+ FG+
Sbjct: 7 WGPRGLGQYLRPNRVAPAVFPKQVQIPFKVFGMAEPESL-VPDTGAVFT-----FGKTKF 60
Query: 106 SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ENI P + + +S G H++ +T + +LYM+G N+ GQLGLG K+A I
Sbjct: 61 AENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSA--I 113
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
PT ++ L K AA G ++ T G V + G G+LG G F
Sbjct: 114 SKPTCIKALKPEKVKLAACGRNHTLVSTDKGSVYAAGGNNEGQLGLGDTDDRDTF-HQIG 172
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
+TP+ +K +AG SA + E+G+++++GD + ++ + ++ P ++
Sbjct: 173 FFTPK-------DNIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVT 225
Query: 286 --------------------GGELYTWGSNENGCLGIGSIDVLH--SPERVQGPFSESPV 323
GELYT+G ENG LG+ + +++ SP+RV G E V
Sbjct: 226 VGKPISWISCGYYHSAFVTVDGELYTFGEPENGKLGLPNQLLINHRSPQRVLG-IPEK-V 283
Query: 324 DQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGE 382
QV+CG HT +++ + +G G GQLG G + + P ++ +
Sbjct: 284 IQVACGGGHTVVLTDKVVYAFGLG------------QFGQLGLGTFLFETSEPKVIERIK 331
Query: 383 NVKALQVSCGFNHTGALLE 401
+ K +SCG NHT + +
Sbjct: 332 DQKISYISCGENHTALMTD 350
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFTVQLIACGGCHMLVF 402
>gi|410988349|ref|XP_004000448.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Felis
catus]
Length = 993
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 160/355 (45%), Gaps = 59/355 (16%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL TE G VYA G N+ G
Sbjct: 58 MFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEG 117
Query: 102 QLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG+ E + L S K + Q+S G + S+A+T DGEL+MWG NS GQ+GL
Sbjct: 118 QLGLGDTEERNTFHLISFFTSQHK--IKQLSAGSNTSAALTEDGELFMWGDNSEGQIGL- 174
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
K + +P +V G + G+ S VT G++ ++G SG+LG + +L
Sbjct: 175 -KDVTNVCVPQQVTV--GKPISWISCGYYHSAFVTTEGELYTFGEPESGKLGLPNQ--LL 229
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
R P+ + + V++A G G + ++AV
Sbjct: 230 CNHR-----MPQPVPGIPEKVVQVACGG----------GHTVVLTEKAV----------- 263
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
YT+G + G LG+G+ S +V + + +SCG HTA I++
Sbjct: 264 -----------YTFGLGQFGQLGLGTFLFETSVPKVIEHVKDQKISSISCGENHTALITD 312
Query: 339 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
G + T+G DG LG N + PT+ + A VSCG
Sbjct: 313 IGLMYTFG----------DGRYGKLGLGLENFTNQFLPTLCSHFLRFIAQLVSCG 357
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 156/345 (45%), Gaps = 69/345 (20%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI-STGYHHSSAITVDGEL 144
+ ++G V+ FG+ +ENI K ++ + S G H++ +T + +L
Sbjct: 8 VPDSGAVFT-----FGKTRFAENIPSKF------WFKNDIPTVLSCGDEHTAVVTGNKKL 56
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
YM+G N+ GQLGLG K+ + PT V+ L K AA G ++ T GGKV + G
Sbjct: 57 YMFGSNNWGQLGLGSKS--TVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGN 114
Query: 205 GSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
G+LG G ++ F TS++ K+K +AG SA + E+G +
Sbjct: 115 NEGQLGLGDTEERNTFHLISFF--TSQH-----------KIKQLSAGSNTSAALTEDGEL 161
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLI--------------------SGGELYTWGSNENGC 299
+++GD + ++ ++ + P + + GELYT+G E+G
Sbjct: 162 FMWGDNSEGQIGLKDVTNVCVPQQVTVGKPISWISCGYYHSAFVTTEGELYTFGEPESGK 221
Query: 300 LGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 357
LG+ + L R+ P P V QV+CG HT ++E + T+G G
Sbjct: 222 LGLP--NQLLCNHRMPQPVPGIPEKVVQVACGGGHTVVLTEKAVYTFGLG---------- 269
Query: 358 HSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GQLG G + + P ++ ++ K +SCG NHT + +
Sbjct: 270 --QFGQLGLGTFLFETSVPKVIEHVKDQKISSISCGENHTALITD 312
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G YG+LGLG + +++ P +CS F + + ++CGG H L
Sbjct: 319 FGDGRYGKLGLGLENFTNQFLPTLCSHFLRFIAQLVSCGGCHMLVF 364
>gi|147920282|ref|YP_685948.1| regulator of chromosome condensation [Methanocella arvoryzae MRE50]
gi|110621344|emb|CAJ36622.1| predicted regulator of chromosome condensation [Methanocella
arvoryzae MRE50]
Length = 451
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 139/285 (48%), Gaps = 33/285 (11%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ +YG+LG G+ + V + + A++ G H L L G V+A G N FGQ+
Sbjct: 100 GDNEYGQLGDGTRVDSSKAVQVQCLSE--VVAISAGDCHNLALKRDGTVWAWGCNLFGQI 157
Query: 104 GISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G ++N+G+ L P+++ GL V +IS GY S AIT DG ++ WG N GQ+G G K
Sbjct: 158 G-NDNVGHDELTPVQVPGLSG-VKEISAGYMGSKAITGDGTVWAWGINEYGQIGDGTKEI 215
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P+ + +S I T + + S+A+ G V +WG G G+LG E ++ L
Sbjct: 216 RSLPVRISINNVSAIDTGE----YGTSIALKSDGSVWTWGNNGQGQLGDPAEDTLSMMLP 271
Query: 223 STSEYTPRLIKELEG--VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM--LFQEGNHA 278
++ + RL+ G V +AG +S + ++G ++++G+ + + G +
Sbjct: 272 VSNLGSERLVPGKTGGLYNVTSVSAGARNSLAVKDDGTLWVWGENQEGRFGNGLKFGRDS 331
Query: 279 RRPSLISG--------------------GELYTWGSNENGCLGIG 303
RP ++ G G +Y WG N G +G G
Sbjct: 332 IRPVIVPGLNNIVSVKAGASYMLALSDDGTVYGWGKNIFGAVGNG 376
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 143/332 (43%), Gaps = 65/332 (19%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
++ A + G + LFL + G V+A G N++GQLG + S + +++ L EVV IS G
Sbjct: 76 NITAASAGVFNALFLKDDGTVWAIGDNEYGQLGDGTRVDSS-KAVQVQCLS-EVVAISAG 133
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
H+ A+ DG ++ WG N GQ+G + P +V LSG+ K+ + G+ S A
Sbjct: 134 DCHNLALKRDGTVWAWGCNLFGQIGNDNVGHDELT-PVQVPGLSGV--KEISAGYMGSKA 190
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+TG G V +WG G++G G KE+ + V+I+
Sbjct: 191 ITGDGTVWAWGINEYGQIGDGT-------------------KEIRSLPVRIS-------- 223
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSP 311
I A+D G + +L S G ++TWG+N G LG + D L
Sbjct: 224 ---------INNVSAIDT-----GEYGTSIALKSDGSVWTWGNNGQGQLGDPAEDTLSMM 269
Query: 312 ERVQGPFSES----------PVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSG 361
V SE V VS G +++ A+ + L W WG + E +G
Sbjct: 270 LPVSNLGSERLVPGKTGGLYNVTSVSAGARNSLAVKDDGTL-WVWGENQ----EGRFGNG 324
Query: 362 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 393
+ G D I P IV N+ +++ +
Sbjct: 325 LKFGR----DSIRPVIVPGLNNIVSVKAGASY 352
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT-LFLTETGCVYATGLNDFG 101
WG +YG++G G+ E R PV S +++ A+ G T + L G V+ G N G
Sbjct: 200 WGINEYGQIGDGTKEIRSLPVRISI---NNVSAIDTGEYGTSIALKSDGSVWTWGNNGQG 256
Query: 102 QLGISENIGYSLEPLRISGLKKE------------VVQISTGYHHSSAITVDGELYMWGK 149
QLG S+ L +S L E V +S G +S A+ DG L++WG+
Sbjct: 257 QLGDPAEDTLSMM-LPVSNLGSERLVPGKTGGLYNVTSVSAGARNSLAVKDDGTLWVWGE 315
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N G+ G G K + P V L+ I + +A G +A++ G V WG G +
Sbjct: 316 NQEGRFGNGLKFGRDSIRPVIVPGLNNIVSVKA--GASYMLALSDDGTVYGWGKNIFGAV 373
Query: 210 GHGQES 215
G+G+ S
Sbjct: 374 GNGERS 379
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 13/135 (9%)
Query: 43 WGNGDYGRLGLGSLE--SRWRPVVCSAFEK---------HSLKALACGGAHTLFLTETGC 91
WGN G+LG + + S PV E+ +++ +++ G ++L + + G
Sbjct: 250 WGNNGQGQLGDPAEDTLSMMLPVSNLGSERLVPGKTGGLYNVTSVSAGARNSLAVKDDGT 309
Query: 92 VYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
++ G N G+ G G S+ P+ + GL +V + G + A++ DG +Y WGKN
Sbjct: 310 LWVWGENQEGRFGNGLKFGRDSIRPVIVPGLNN-IVSVKAGASYMLALSDDGTVYGWGKN 368
Query: 151 SNGQLGLGKKAAKVI 165
G +G G+++ V+
Sbjct: 369 IFGAVGNGERSETVV 383
>gi|428166718|gb|EKX35689.1| hypothetical protein GUITHDRAFT_57398, partial [Guillardia theta
CCMP2712]
Length = 257
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 110/233 (47%), Gaps = 13/233 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN D G+ G + S P + + +H + +ACG +HTL LT T V + GL +G
Sbjct: 20 WGNSDRGQCGHDTFRSSQVPRLIRSLREHYVMQVACGESHTLILTSTSQVLSCGLAAYGA 79
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + P I L VVQI+ G +HS+A+ GE +MWG N +GQLGL +
Sbjct: 80 LGHGDGED-CCTPRVIGALWSLPVVQIAAGENHSAAVVSTGEAHMWGLNKHGQLGLRAEG 138
Query: 162 AK--VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + LS + K A G SV + KV S G G G+LGHG
Sbjct: 139 GRGEISMAEINQAMLSTLNVKLVACGGNHSVFLCSDLKVYSCGMGSKGQLGHGSRR---- 194
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
E+ PR ++ LE ++ + G+ H+ D +G +++ G ++
Sbjct: 195 -----DEHRPRRVERLEEQEISEVSCGYEHTLFRDSSGVLFVCGSNEYGQLFL 242
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 112/273 (41%), Gaps = 57/273 (20%)
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
++ G HS+ IT DGEL WG + GQ G + +P + L + Q A G
Sbjct: 1 VACGGQHSALITKDGELVTWGNSDRGQ--CGHDTFRSSQVPRLIRSLREHYVMQVACGES 58
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
++ +T +VLS G G LGHG TPR+I L + V AAG
Sbjct: 59 HTLILTSTSQVLSCGLAAYGALGHGDGEDCC---------TPRVIGALWSLPVVQIAAGE 109
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGI---GS 304
HSA +++S GE + WG N++G LG+ G
Sbjct: 110 NHSA------------------------------AVVSTGEAHMWGLNKHGQLGLRAEGG 139
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ E Q S V V+CG H+ + S+ K+ + G G S GQ
Sbjct: 140 RGEISMAEINQAMLSTLNVKLVACGGNHSVFLCSDLKVYSCGMG------------SKGQ 187
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
LGHG+ D P V E + +VSCG+ HT
Sbjct: 188 LGHGSRRDEHRPRRVERLEEQEISEVSCGYEHT 220
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G G G+LG GS RP E+ + ++CG HTLF +G ++ G N++GQL
Sbjct: 181 GMGSKGQLGHGSRRDEHRPRRVERLEEQEISEVSCGYEHTLFRDSSGVLFVCGSNEYGQL 240
Query: 104 GISENIGYSLEPLRIS 119
+ + +L P+ IS
Sbjct: 241 FLGSDHQEALTPVEIS 256
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 14/115 (12%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 345
GEL TWG+++ G G + P ++ E V QV+CG HT + S ++L+ G
Sbjct: 15 GELVTWGNSDRGQCGHDTFRSSQVPRLIR-SLREHYVMQVACGESHTLILTSTSQVLSCG 73
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
++ G LGHG+ D P ++ ++ +Q++ G NH+ A++
Sbjct: 74 L------------AAYGALGHGDGEDCCTPRVIGALWSLPVVQIAAGENHSAAVV 116
>gi|47226892|emb|CAG05784.1| unnamed protein product [Tetraodon nigroviridis]
Length = 557
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 121/225 (53%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSA-FEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV+ SA + +ACG H++ LT++G VYA G N+ G
Sbjct: 114 WGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALTDSGEVYAWGYNNCG 173
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P R+S + V I G S A+ +GE+Y WG N NGQLGLG
Sbjct: 174 QVG-SGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGN 232
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P ++ L G+ +Q G+ S+A+T G + +WGA G+LG G +S+ L
Sbjct: 233 NGNQL--TPCRLVALQGLCVQQIVSGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLS 290
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+ +++ E E + V+IAA H SA ++G+VY++G
Sbjct: 291 PV--------QIMTEKERI-VEIAACHSTHTSAAKTQSGQVYMWG 326
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 132/301 (43%), Gaps = 49/301 (16%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P + +L+ G G H L TE G ++A G N + QLG +
Sbjct: 69 LGTGDSQSSIVPKKVDILSGRKVVSLSYGSGPHILLATEDGELFAWGHNGYSQLG-NGTT 127
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+ +S L K+V +++ G HHS A+T GE+Y WG N+ GQ+G G A + P
Sbjct: 128 NQGVAPVLVSANLLNKKVTEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQ--PT 185
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P +V CL G S+AV G+V WG G+G+LG G + L
Sbjct: 186 PRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQL-------- 237
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
TP + L+G+ V+ +G+ HS +L
Sbjct: 238 -TPCRLVALQGLCVQQIVSGYAHSL------------------------------ALTDE 266
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTW 344
G LY WG+N G LG G+ SP ++ E V+ +C HT+A G++ W
Sbjct: 267 GLLYAWGANTYGQLGTGNKSNQLSPVQIMTE-KERIVEIAACHSTHTSAAKTQSGQVYMW 325
Query: 345 G 345
G
Sbjct: 326 G 326
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 137/316 (43%), Gaps = 59/316 (18%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
+ P +S ++K V T + + IT D E+Y G N + LG G + + +P KV+
Sbjct: 28 MSPQELSTIRKACV-FGTSANEAIYITADDEVYALGLNCSNCLGTGDSQSSI--VPKKVD 84
Query: 173 CLSGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
LSG K +L + + T G++ +WG G +LG+G + + P
Sbjct: 85 ILSG--RKVVSLSYGSGPHILLATEDGELFAWGHNGYSQLGNGTTNQGVA---------P 133
Query: 230 RLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS------ 282
L+ L KV A G HS + ++G VY +G ++ G+ A +P+
Sbjct: 134 VLVSANLLNKKVTEVACGSHHSMALTDSGEVYAWGYNNCGQV--GSGSTANQPTPRRVSS 191
Query: 283 -------------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
++ GE+Y WG N NG LG+G+ +P R+ V
Sbjct: 192 CLQNRVAVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLVA-LQGLCV 250
Query: 324 DQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 383
Q+ G+ H+ A+++ +L + WG ++ GQLG GN + + P + E
Sbjct: 251 QQIVSGYAHSLALTDEGLL-YAWGA----------NTYGQLGTGNKSNQLSPVQI-MTEK 298
Query: 384 VKALQV-SCGFNHTGA 398
+ +++ +C HT A
Sbjct: 299 ERIVEIAACHSTHTSA 314
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 82/171 (47%), Gaps = 30/171 (17%)
Query: 29 RWISSTLQRRFAAL-------------------WGNGDYGRLGLGSLESRWRPVVCSAFE 69
R +SS LQ R A WG G+LGLG+ ++ P A +
Sbjct: 187 RRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLVALQ 246
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
++ + G AH+L LT+ G +YA G N +GQLG + N L P++I K+ +V+I+
Sbjct: 247 GLCVQQIVSGYAHSLALTDEGLLYAWGANTYGQLG-TGNKSNQLSPVQIMTEKERIVEIA 305
Query: 130 TGY--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+ H S+A T G++YMWG+ GQ + V+P T C +F
Sbjct: 306 ACHSTHTSAAKTQSGQVYMWGQ-CRGQ-------SIVLPYLTHFACTDDVF 348
>gi|356573964|ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 395
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 151/371 (40%), Gaps = 72/371 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LG+GS E + + A + H ++++ G ++L + + G ++ G N
Sbjct: 10 WGSGEDGQLGIGSNEEKEWVCLVKALQPHRIRSVVAGSRNSLAIADDGKLFTWGWNQRAT 69
Query: 103 LG-----ISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQL- 155
LG SEN + P ++ L ++VQ + G H A+ G Y WG N GQ
Sbjct: 70 LGHPAETKSENKTENT-PSQVKALSSVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 128
Query: 156 -------GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
G G+ + I IP + C + +Q A G SV +T G V +WG
Sbjct: 129 EEPERKDGTGRPLRRDIEIPQR--CAPKLVVRQVAAGGTHSVVLTREGHVWTWG------ 180
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
+ G ++ S P ++ LE V++ A G H+ + E+
Sbjct: 181 -----QPWPPGDIKQIS--VPVRVQGLE--NVRLIAVGAFHNLALQED------------ 219
Query: 269 KMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 328
G L+ WG+NE G LG G P RVQG + VD +
Sbjct: 220 ------------------GTLWAWGNNEYGQLGTGDTQPRSQPIRVQGLSDLTLVDIAAG 261
Query: 329 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 388
GW TA EG++ WG G HG G + + P V +Q
Sbjct: 262 GWHSTALTDEGEVYGWG-RGEHGRLG---------FGDSDKSSKMVPQKVQLLAGEDIVQ 311
Query: 389 VSCGFNHTGAL 399
VSCG H+ AL
Sbjct: 312 VSCGGTHSVAL 322
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 89/154 (57%), Gaps = 4/154 (2%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV E +++ +A G H L L E G ++A G N++GQLG + S +P+R+ GL
Sbjct: 194 PVRVQGLE--NVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRS-QPIRVQGL 250
Query: 122 KK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
+V I+ G HS+A+T +GE+Y WG+ +G+LG G +P KV+ L+G
Sbjct: 251 SDLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFGDSDKSSKMVPQKVQLLAGEDIV 310
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
Q + G SVA+T G + S+G G GRLG+G++
Sbjct: 311 QVSCGGTHSVALTRDGHMFSFGRGDHGRLGYGRK 344
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 134/311 (43%), Gaps = 45/311 (14%)
Query: 40 AALWGNGDYGRLG--------LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
A WG +YG+ G G R + K ++ +A GG H++ LT G
Sbjct: 116 AYAWGGNEYGQCGEEPERKDGTGRPLRRDIEIPQRCAPKLVVRQVAAGGTHSVVLTREGH 175
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ +GQ +I P+R+ GL+ V I+ G H+ A+ DG L+ WG N
Sbjct: 176 VWT-----WGQPWPPGDIKQISVPVRVQGLEN-VRLIAVGAFHNLALQEDGTLWAWGNNE 229
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
GQLG G + PI +V+ LS + A G S A+T G+V WG G GRLG
Sbjct: 230 YGQLGTGDTQPRSQPI--RVQGLSDLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGF 287
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G +S+ P+ ++ L G + + G HS + +G ++ FG
Sbjct: 288 GDSDK-------SSKMVPQKVQLLAGEDIVQVSCGGTHSVALTRDGHMFSFG-------- 332
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCG 329
G+H R L G ++ T E ID L P+ G +E V+CG
Sbjct: 333 --RGDHGR---LGYGRKVTTGQPMEV------PID-LPPPQDPSGTATEGHWIAKLVACG 380
Query: 330 WKHTAAISEGK 340
+HT AI E K
Sbjct: 381 GRHTLAIVEWK 391
>gi|222619121|gb|EEE55253.1| hypothetical protein OsJ_03147 [Oryza sativa Japonica Group]
Length = 954
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 169/402 (42%), Gaps = 71/402 (17%)
Query: 14 LKQDIKLGSKLGIC-KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
L+ D+ L C R ++ T ++ WG GRLG G+ RP + +
Sbjct: 250 LESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTV 309
Query: 73 LKALACGGAHTLFLTETGCVY--ATGLNDFGQLGISENIGYSLEPLRISGLKK--EVVQI 128
+ ++CG HT +T +G ++ G + G LG + Y L P ++SG + +V+ +
Sbjct: 310 VDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWL-PKKVSGPLEGLQVLSV 368
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
+ G HS+ T G+LY +G + G LG G + + + P +VE LSG T + A G
Sbjct: 369 ACGSWHSALTTSSGKLYTFGDGTFGVLGHGDR--ETLAYPKEVEALSGFKTIKVACGIWH 426
Query: 189 SVAV------TGGG----KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
S A+ TG K+ +WG G RLGHG + PRL+ +
Sbjct: 427 SAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKE-------------PRLVPKCVQA 473
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENG 298
+ F AC H +L + G ++T GS+ NG
Sbjct: 474 ---LLEYNFHQLAC-----------------------GHNMTVALATSGRVFTMGSSSNG 507
Query: 299 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH-TAAISEGKILTWGWGGSHGTFSEDG 357
LG D P VQ + V+++SCG H T S ++ TWG G +
Sbjct: 508 QLGNPKSDG-KQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMGAN-------- 558
Query: 358 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G+LGHG+ D P +V ++ +SCG N T +
Sbjct: 559 ----GRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCI 596
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 108/267 (40%), Gaps = 57/267 (21%)
Query: 142 GELYMWGK------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
G++Y+WG+ S+G V+ IP +E + Q A G T
Sbjct: 216 GDVYVWGEVWTDVTPSDGHTSSSCSKVDVL-IPKPLESDVVLDVNQIACGTRHVALTTRQ 274
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG GRLGHG ++ I P+L++ L V + + G H+ +
Sbjct: 275 GEVFTWGEEFGGRLGHGTDADI---------SRPKLVESLSLTVVDLISCGEFHTCAVTT 325
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
+G ++ +GD GS G LG G+ P++V
Sbjct: 326 SGDLFNWGD----------------------------GSYNVGLLGCGTEVSYWLPKKVS 357
Query: 316 GPFSESPVDQVSCG-WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
GP V V+CG W S GK+ T+G GTF G LGHG+ +
Sbjct: 358 GPLEGLQVLSVACGSWHSALTTSSGKLYTFG----DGTF--------GVLGHGDRETLAY 405
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V K ++V+CG H+ A++E
Sbjct: 406 PKEVEALSGFKTIKVACGIWHSAAIVE 432
>gi|449435362|ref|XP_004135464.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 608
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 180/429 (41%), Gaps = 67/429 (15%)
Query: 12 YYLKQDIKLGSK-----LGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCS 66
Y L Q+ + SK +G+ + + Q ++ WG G +LG G LE P +
Sbjct: 199 YELLQEYRASSKETMSMVGLREVVVDDVEQELWS--WGAGTDAQLGTGRLEDNNLPQLVR 256
Query: 67 AFEKHSLKA---LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
S A L+CGGAH + LT G V G + GQLG+ + I SL P + L
Sbjct: 257 TPSLSSAPAISFLSCGGAHVIALTAGGGVLTWGRGNSGQLGLGDMIS-SLHPKPVMRLGS 315
Query: 124 E-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
+ +S G+ HS ++ +G+LY G S GQLG G + P +V S +
Sbjct: 316 YFITHVSAGWSHSGFVSDEGKLYTCGDGSFGQLGHGDYQLRC--FPEEVLFFSDKHVDKI 373
Query: 183 ALGFEQSVAV---TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
A G S+A+ + G +V +GAG G+LG ++ + P L LE +
Sbjct: 374 ACGMRHSLALVKGSSGEQVYGFGAGKRGQLGISKKIQTVNL--------PILSSNLEAAE 425
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------------LIS 285
+ AAG HSA + G +Y +G H PS L
Sbjct: 426 IVGIAAGGDHSAALSAEGHLYTWGRGFKSTSDVYSPQHLPSPSSFSKVALGWNHALVLTD 485
Query: 286 GGELYTWGSNENGCLG----IGSIDVLHSPERVQGPFSESP------VDQVSCGWKHTAA 335
GELY G +G L + S+ L R + F P V ++ G +H+
Sbjct: 486 EGELYMLGGKHHGALSDSEMLNSMKSLPGDSR-EDNFQAVPALSGIKVLDIAAGAEHSVI 544
Query: 336 ISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA----LQVS 390
++E G + TWGWG GQLG G+ D+ +P VN +++ ++V
Sbjct: 545 VTEDGGVKTWGWG------------EHGQLGLGDTCDHTNPQTVNLNLKLESTAYDVKVY 592
Query: 391 CGFNHTGAL 399
CG T A+
Sbjct: 593 CGSGFTVAV 601
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 60/122 (49%), Gaps = 16/122 (13%)
Query: 282 SLISGGELYTWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EG 339
+L +GG + TWG +G LG+G I LH P+ V + VS GW H+ +S EG
Sbjct: 278 ALTAGGGVLTWGRGNSGQLGLGDMISSLH-PKPVMR-LGSYFITHVSAGWSHSGFVSDEG 335
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
K+ T G G S GQLGHG+ P V F + +++CG H+ AL
Sbjct: 336 KLYTCGDG------------SFGQLGHGDYQLRCFPEEVLFFSDKHVDKIACGMRHSLAL 383
Query: 400 LE 401
++
Sbjct: 384 VK 385
>gi|218188915|gb|EEC71342.1| hypothetical protein OsI_03406 [Oryza sativa Indica Group]
Length = 848
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 169/402 (42%), Gaps = 71/402 (17%)
Query: 14 LKQDIKLGSKLGIC-KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
L+ D+ L C R ++ T ++ WG GRLG G+ RP + +
Sbjct: 250 LESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTV 309
Query: 73 LKALACGGAHTLFLTETGCVY--ATGLNDFGQLGISENIGYSLEPLRISGLKK--EVVQI 128
+ ++CG HT +T +G ++ G + G LG + Y L P ++SG + +V+ +
Sbjct: 310 VDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWL-PKKVSGPLEGLQVLSV 368
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
+ G HS+ T G+LY +G + G LG G + + + P +VE LSG T + A G
Sbjct: 369 ACGSWHSALTTSSGKLYTFGDGTFGVLGHGDR--ETLAYPKEVEALSGFKTIKVACGIWH 426
Query: 189 SVAV------TGGG----KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
S A+ TG K+ +WG G RLGHG + PRL+ +
Sbjct: 427 SAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKE-------------PRLVPKCVQA 473
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENG 298
+ F AC H +L + G ++T GS+ NG
Sbjct: 474 ---LLEYDFHQLAC-----------------------GHNMTVALATSGRVFTMGSSSNG 507
Query: 299 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH-TAAISEGKILTWGWGGSHGTFSEDG 357
LG D P VQ + V+++SCG H T S ++ TWG G +
Sbjct: 508 QLGNPKSDG-KQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMGAN-------- 558
Query: 358 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G+LGHG+ D P +V ++ +SCG N T +
Sbjct: 559 ----GRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCI 596
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 108/267 (40%), Gaps = 57/267 (21%)
Query: 142 GELYMWGK------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
G++Y+WG+ S+G V+ IP +E + Q A G T
Sbjct: 216 GDVYVWGEVWTDVTPSDGHTSSSCSKVDVL-IPKPLESDVVLDVNQIACGTRHVALTTRQ 274
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG GRLGHG ++ I P+L++ L V + + G H+ +
Sbjct: 275 GEVFTWGEEFGGRLGHGTDADI---------SRPKLVESLSLTVVDLISCGEFHTCAVTT 325
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
+G ++ +GD GS G LG G+ P++V
Sbjct: 326 SGDLFNWGD----------------------------GSYNVGLLGCGTEVSYWLPKKVS 357
Query: 316 GPFSESPVDQVSCG-WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
GP V V+CG W S GK+ T+G GTF G LGHG+ +
Sbjct: 358 GPLEGLQVLSVACGSWHSALTTSSGKLYTFG----DGTF--------GVLGHGDRETLAY 405
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V K ++V+CG H+ A++E
Sbjct: 406 PKEVEALSGFKTIKVACGIWHSAAIVE 432
>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
Length = 1062
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 161/367 (43%), Gaps = 53/367 (14%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+LGLG +E P +++ +ACG HTLFLT TG VYA G ND+
Sbjct: 10 WGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDY 69
Query: 101 GQLGISENIGYS-LEP-LRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG + P L I L+ V +QI G HS A++ G++ WG N GQLG
Sbjct: 70 SQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGH 129
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+++ +P V L Q A G S+A+T G++ SWG+ G+LG + +
Sbjct: 130 ATD-KEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL 188
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
T P + L G+ + A G HS I ++G V+ +G ++ + +
Sbjct: 189 ------THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETN 242
Query: 278 ARRPSLIS------------GGELYTWGSNENGCL------------GIGSIDVLHSPER 313
P+ + G E + +NE G G S ++L R
Sbjct: 243 RSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEML---PR 299
Query: 314 VQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+ S + QV+CG +HT A+ S G++ +G G S GQLG +
Sbjct: 300 MVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLG------------SSGQLGTRSTKS 347
Query: 372 YIHPTIV 378
+ P +V
Sbjct: 348 LMLPQVV 354
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 122/279 (43%), Gaps = 50/279 (17%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P+++ +Q A G ++ +T GKV + G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 203 AGGSGRLGHG---QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
+ +LGH + + FL LI EL+ + G HS + + G+V
Sbjct: 66 SNDYSQLGHDLPTKRPRMSPFL---------LIPELQDYVIIQICCGSRHSLALSDWGQV 116
Query: 260 YIFGDR-------AVDKMLFQEGNHARR----------------PSLISGGELYTWGSNE 296
+GD A DK + Q R+ +L S GELY+WGSN
Sbjct: 117 LSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNI 176
Query: 297 NGCLGIGSI-DVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTF 353
G LG+ S D+ H P R+ P+ ++CG H+ IS+ + +GW
Sbjct: 177 YGQLGVNSPNDLTHCNYPLRLTTLLG-IPLAAIACGGNHSFLISKSGAV-FGW------- 227
Query: 354 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
G ++ GQLG ++ + +PT + + V+CG
Sbjct: 228 ---GRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACG 263
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 81/210 (38%), Gaps = 49/210 (23%)
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+ G ++ WG+ G+LG LG + TP I V+ A G H+
Sbjct: 1 MASGKELYCWGSTSHGQLG-------LGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTL 53
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSP 311
+ G+VY G ++ +RP + SP
Sbjct: 54 FLTATGKVYACGSNDYSQL--GHDLPTKRPRM--------------------------SP 85
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+ + + Q+ CG +H+ A+S+ G++L+WG + GQLGH D
Sbjct: 86 FLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWG------------DNDCGQLGHATDK 133
Query: 371 DYIH-PTIVNFGENVKALQVSCGFNHTGAL 399
+ + P +V +Q++CG NH+ AL
Sbjct: 134 EIVQLPKVVRQLVTKTVVQIACGNNHSLAL 163
>gi|222629908|gb|EEE62040.1| hypothetical protein OsJ_16822 [Oryza sativa Japonica Group]
Length = 841
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 156/373 (41%), Gaps = 71/373 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E P + + ++ +ACG HT +T TG +Y G ++
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + G+ + P RISG V +S G H++ IT G+L+ +G S G LG G
Sbjct: 161 GLLGHGTDAGHWI-PKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-----------TGGGKVLSWGAGGSG 207
+ I P +VE LSG+ T A G + A+ GK+ +WG G
Sbjct: 220 NLTS--ISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKH 277
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + S L P + L A G + C+ +G+V G+ +V
Sbjct: 278 RLGHGDKESRL---------KPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGN-SV 327
Query: 268 DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
L + R P L+ +R+ G V QV+
Sbjct: 328 YGQLGNPNSDGRLPCLVE--------------------------DRIAGEH----VLQVA 357
Query: 328 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG H A ++ ++ TWG G + G+LGHG+ D PT V ++
Sbjct: 358 CGSYHVAVLTGRSEVFTWGKGAN------------GRLGHGDIEDRKVPTQVEALKDRAV 405
Query: 387 LQVSCGFNHTGAL 399
++CG N T A+
Sbjct: 406 RHIACGANFTAAI 418
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 115/276 (41%), Gaps = 69/276 (25%)
Query: 142 GELYMWGK---------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
G++Y+WG+ S+ + +K ++P P + + ++ G + V
Sbjct: 35 GDVYVWGEVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVY--HVDCGVRHAALV 92
Query: 193 TGGGKVLSWGAGGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
T G V +WG GRLGHG +E S+ PRL++ L V A G H+
Sbjct: 93 TRNGDVFTWGEDSGGRLGHGTREDSV----------HPRLVESLAACNVDFVACGEFHTC 142
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWG--SNENGCLGIGSIDVLH 309
+ + GELYTWG ++ G LG G+ D H
Sbjct: 143 AV------------------------------TTTGELYTWGDGTHNVGLLGHGT-DAGH 171
Query: 310 -SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
P+R+ G PV VSCG HTA I S G++ T+G G S G LGHG
Sbjct: 172 WIPKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDG------------SFGVLGHG 219
Query: 368 NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
N P V +K + V+CG HT A++E +
Sbjct: 220 NLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVI 255
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 128/301 (42%), Gaps = 70/301 (23%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H++ +T +G+++ WG++S G+LG G + V P VE
Sbjct: 69 KPLE-SRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG ++ + P+
Sbjct: 126 LAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDA---------GHWIPKR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
I L+G+ V + G H+A I G+++ FGD +
Sbjct: 177 ISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSF----------------------- 213
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------------ 338
G LG G++ + P+ V+ S V+CG HTAAI E
Sbjct: 214 -------GVLGHGNLTSISCPKEVES-LSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSA 265
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
GK+ TWG G H +LGHG+ + PT V + +V+CG + T
Sbjct: 266 GKLFTWGDGDKH------------RLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVC 313
Query: 399 L 399
L
Sbjct: 314 L 314
>gi|421100544|ref|ZP_15561167.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii str. 200901122]
gi|410796347|gb|EKR98483.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii str. 200901122]
Length = 506
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 136/322 (42%), Gaps = 61/322 (18%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WGN G+LG+G+ + R P + + + A G H L L G V
Sbjct: 202 WGNNAKGQLGIGNNNTNPANPRTAGNRQPPTLVPGIDDAVMGAY--GFNHALILKSDGTV 259
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
+ G N+ GQLG N +S+ P+ + GLK +V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 260 VSFGQNNVGQLGNGANDLNADSFSMNPVAVVGLK-DVIQVIAGSEHSAALTENGEVYVWG 318
Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G+ +A P KVE LSGI KQ A G + +A+ GK+ SWG S
Sbjct: 319 RNQYGNLGNGRLSAANAAQSTPVKVEGLSGI--KQIANGRDHILALASDGKIYSWGLNAS 376
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG G S TP + L + AG S
Sbjct: 377 GQLGIGGNGS--------PNPTPIPTQVLNILNASSVWAGGTQSF--------------- 413
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGC-LGIGSIDVLHSPERVQGPFSESPVDQ 325
S++ GE+ WG+N N L IG + L E + V
Sbjct: 414 ---------------SILKSGEVKGWGANGNTANLAIGETNTLKVYEPNKAVVGIDNVIH 458
Query: 326 VSCGWKHT-AAISEGKILTWGW 346
CG H + G+I WGW
Sbjct: 459 FGCGATHNFVLLGNGEIYGWGW 480
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 126/290 (43%), Gaps = 60/290 (20%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
L GGAH+ FL + G VY TG N+FGQLG + G + + + I ++
Sbjct: 131 LGAGGAHSGFL-KNGEVYTTGRNNFGQLGTGNSTGDDNNDVIVKLNSISNIFSIHFNQNN 189
Query: 135 SSAITVDGELYMWGKNSNGQLGLG---------KKAAKVIPIPTKVECLSGIFTKQAALG 185
S AI +G +Y WG N+ GQLG+G + A P PT V + A G
Sbjct: 190 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRTAGNRQP-PTLVPGIDDAV--MGAYG 246
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAA 244
F ++ + G V+S+G G+LG+G L + S P + L+ V I
Sbjct: 247 FNHALILKSDGTVVSFGQNNVGQLGNGAND-----LNADSFSMNPVAVVGLKDVIQVI-- 299
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGS 304
AG HSA + ENG VY+ WG N+ G LG G
Sbjct: 300 AGSEHSAALTENGEVYV------------------------------WGRNQYGNLGNGR 329
Query: 305 IDVLH----SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGS 349
+ + +P +V+G S + Q++ G H A+ S+GKI +WG S
Sbjct: 330 LSAANAAQSTPVKVEG---LSGIKQIANGRDHILALASDGKIYSWGLNAS 376
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 72/177 (40%), Gaps = 11/177 (6%)
Query: 42 LWGNGDYGRLGLGSLE----SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G L ++ PV +K +A G H L L G +Y+ GL
Sbjct: 316 VWGRNQYGNLGNGRLSAANAAQSTPVKVEGLS--GIKQIANGRDHILALASDGKIYSWGL 373
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N + P+ L + G S +I GE+ WG N N L
Sbjct: 374 NASGQLGIGGNGSPNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGANGNTANL 433
Query: 156 GLGKKAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+G+ + P K V + + G + + G G++ WG G LG
Sbjct: 434 AIGETNTLKVYEPNKAVVGIDNVI--HFGCGATHNFVLLGNGEIYGWGWNFKGSLGR 488
>gi|74002225|ref|XP_851549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Canis lupus
familiaris]
Length = 1015
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 139/310 (44%), Gaps = 54/310 (17%)
Query: 46 GDYGRLGLGSLESRWRPVVCSA-------FEKHSLKALACGGAHTLFLTETGCVYATGLN 98
GD GR G L R P CSA E + ++CG H+L + G V+A G
Sbjct: 48 GDNGR---GQLGQRGAP--CSAQLKRIRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAG 102
Query: 99 DFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQLG E +L P++I L ++ Q+S G++HS A++ G+++ WG NS+GQLGL
Sbjct: 103 SEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGL 162
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
GKK P +V L GI Q A G S A++ G WG +G+L + +
Sbjct: 163 GKKFPSQAS-PQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNV- 220
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S Y P I L+ + V + G+ H+ + +NG+V+ FGD
Sbjct: 221 -----SGQSYKPYSISALKNLGVIYISCGYEHTVVLTQNGKVFTFGD------------- 262
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA-- 335
N G LG P+ V+G + V Q+ CG HT A
Sbjct: 263 -----------------NTYGQLGHSPTAEKSGPQLVEG--IDGLVSQIDCGSYHTLAYV 303
Query: 336 ISEGKILTWG 345
+ GK++++G
Sbjct: 304 YTTGKVVSFG 313
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 163/371 (43%), Gaps = 89/371 (23%)
Query: 43 WGNGDYG-----RLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
WG G G R+GLG +E L+ A G H+L L G V++ G
Sbjct: 5 WGPGPRGPVSRRRVGLGGVE---------------LRQAASGERHSLLLLSNGQVHSCGD 49
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
N GQLG S + RI L+ V +S G HS A+ G ++ WG S GQLG
Sbjct: 50 NGRGQLG-QRGAPCSAQLKRIRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 157 LGK-KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G+ K +IP+ K++ L+ I KQ + G S+A++ GG+V SWG+ G+LG G+
Sbjct: 109 TGEFKETNLIPM--KIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGK-- 164
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ S+ +P+ ++ L+G+ + AAG HS
Sbjct: 165 ------KFPSQASPQRVRSLDGIPLAQVAAGGAHSF------------------------ 194
Query: 276 NHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGW 330
+L G + WG N G L + +V + P+S S + +SCG+
Sbjct: 195 ------ALSLSGTSFGWGRNNAGQLALHKNNVSGQSYK---PYSISALKNLGVIYISCGY 245
Query: 331 KHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL-- 387
+HT +++ GK+ T+ G ++ GQLGH + P +V E + L
Sbjct: 246 EHTVVLTQNGKVFTF------------GDNTYGQLGHSPTAEKSGPQLV---EGIDGLVS 290
Query: 388 QVSCGFNHTGA 398
Q+ CG HT A
Sbjct: 291 QIDCGSYHTLA 301
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 130/284 (45%), Gaps = 60/284 (21%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E+ Q ++G HS + +G+++ G N GQLG ++ A ++ L + +
Sbjct: 24 ELRQAASGERHSLLLLSNGQVHSCGDNGRGQLG--QRGAPCSAQLKRIRALETLHVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ--ESSILGFLRSTSEYTPRLIKELEGVKVK 241
G E S+AV G+V +WGAG G+LG G+ E++++ P IK L +K+K
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLI----------PMKIKTLNDIKIK 131
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLG 301
+ G HS + E GG++++WGSN +G LG
Sbjct: 132 QVSCGHYHSLALSE------------------------------GGQVFSWGSNSDGQLG 161
Query: 302 IG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 360
+G SP+RV+ P+ QV+ G H+ A+S ++GW G ++
Sbjct: 162 LGKKFPSQASPQRVRS-LDGIPLAQVAAGGAHSFALSLSGT-SFGW----------GRNN 209
Query: 361 GGQLG-HGNDV--DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GQL H N+V P ++ +N+ + +SCG+ HT L +
Sbjct: 210 AGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVLTQ 253
>gi|403330678|gb|EJY64235.1| hypothetical protein OXYTRI_24854 [Oxytricha trifallax]
Length = 1365
Score = 105 bits (263), Expect = 3e-20, Method: Composition-based stats.
Identities = 94/319 (29%), Positives = 152/319 (47%), Gaps = 41/319 (12%)
Query: 44 GNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
G+ G+LG+G SL+ + P++ A ++ACG HTL TE G VY+ G FG
Sbjct: 141 GSNTNGQLGVGDMSLKMKNSPMLVEALMDQKPISIACGANHTLVCTERGDVYSWGQGIFG 200
Query: 102 QLGISENIGYSLEP--LRIS----GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
LG + N+ P + IS K +++Q+S G S+ + G +Y G+N GQL
Sbjct: 201 ALG-AGNLDDQFLPKLIHISHDQLSTKSQMIQVSAGMRFSAILDQSGRVYTCGQNDAGQL 259
Query: 156 GLGKKAAKVIPIPTKV--ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
G+G + + IPI K E +S I Q L + +T G V S GA G+LG
Sbjct: 260 GIGGRDQENIPISIKKFPERVSMIACGQMHL-----LMLTKQGTVYSCGANSFGQLG--- 311
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
L R++S +P LI+++ + ++ AAG ++ ++G +Y++G + L
Sbjct: 312 ----LNNKRNSS--SPLLIQDISHIPMRYVAAGSFSASISYDSGDLYLWGSGVFGEFLTP 365
Query: 274 E--------------GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
GNH ++ G +Y+WG N +G LG G D +P+ + +
Sbjct: 366 HRVKTIKGMTVSVSIGNHF-GIAVNQDGIVYSWGHNNSGELGQGDFDERPTPQIIN-QLN 423
Query: 320 ESPVDQVSCGWKHTAAISE 338
+ V VSCG + A+ +
Sbjct: 424 DKIVTLVSCGRNFSIALGQ 442
Score = 95.1 bits (235), Expect = 6e-17, Method: Composition-based stats.
Identities = 97/392 (24%), Positives = 160/392 (40%), Gaps = 73/392 (18%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ G+LGLG + + PV +K ++CG H F+T VY+ G N G
Sbjct: 87 WGSDQAGQLGLGQSQIGKSYPVPRYCTYNIGIKYVSCGDEHAAFITTGNMVYSMGSNTNG 146
Query: 102 QLGISE-NIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG+ + ++ P+ + L ++ + I+ G +H+ T G++Y WG+ G LG G
Sbjct: 147 QLGVGDMSLKMKNSPMLVEALMDQKPISIACGANHTLVCTERGDVYSWGQGIFGALGAGN 206
Query: 160 KAAKVIP---------IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+ +P + TK + + Q + G S + G+V + G +G+LG
Sbjct: 207 LDDQFLPKLIHISHDQLSTKSQMI------QVSAGMRFSAILDQSGRVYTCGQNDAGQLG 260
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G E P IK+ +V + A G +H + + G VY G + ++
Sbjct: 261 IGGRD---------QENIPISIKKFPE-RVSMIACGQMHLLMLTKQGTVYSCGANSFGQL 310
Query: 271 LFQEGNHARRPSLIS----------------------GGELYTWGSNENGCLGIGSIDVL 308
++ P LI G+LY WGS G
Sbjct: 311 GLNNKRNSSSPLLIQDISHIPMRYVAAGSFSASISYDSGDLYLWGS--------GVFGEF 362
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
+P RV+ + VS G A+++ G + +W GH++ G+LG G
Sbjct: 363 LTPHRVKT--IKGMTVSVSIGNHFGIAVNQDGIVYSW------------GHNNSGELGQG 408
Query: 368 NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ + P I+N + VSCG N + AL
Sbjct: 409 DFDERPTPQIINQLNDKIVTLVSCGRNFSIAL 440
Score = 72.0 bits (175), Expect = 4e-10, Method: Composition-based stats.
Identities = 75/278 (26%), Positives = 115/278 (41%), Gaps = 50/278 (17%)
Query: 143 ELYMWGKNSNGQLGLGK-KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
E++ WG + GQLGLG+ + K P+P C I K + G E + +T G V S
Sbjct: 83 EIFSWGSDQAGQLGLGQSQIGKSYPVPRY--CTYNIGIKYVSCGDEHAAFITTGNMVYSM 140
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY- 260
G+ +G+LG G S + + +P L++ L K A G H+ E G VY
Sbjct: 141 GSNTNGQLGVGDMSLKM-------KNSPMLVEALMDQKPISIACGANHTLVCTERGDVYS 193
Query: 261 ----IFG--------DRAVDKMLFQEGNHARRPS--------------LISGGELYTWGS 294
IFG D+ + K++ + S L G +YT G
Sbjct: 194 WGQGIFGALGAGNLDDQFLPKLIHISHDQLSTKSQMIQVSAGMRFSAILDQSGRVYTCGQ 253
Query: 295 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFS 354
N+ G LGIG D + P ++ F E V ++CG H +++ GT
Sbjct: 254 NDAGQLGIGGRDQENIPISIK-KFPER-VSMIACGQMHLLMLTK-----------QGTVY 300
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 392
G +S GQLG N + P ++ ++ V+ G
Sbjct: 301 SCGANSFGQLGLNNKRNSSSPLLIQDISHIPMRYVAAG 338
Score = 43.9 bits (102), Expect = 0.16, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 13/111 (11%)
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 347
E+++WGS++ G LG+G + S + + VSCG +H A I+ G ++
Sbjct: 83 EIFSWGSDQAGQLGLGQSQIGKSYPVPRYCTYNIGIKYVSCGDEHAAFITTGNMVY---- 138
Query: 348 GSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHT 396
G ++ GQLG G+ + P +V + K + ++CG NHT
Sbjct: 139 -------SMGSNTNGQLGVGDMSLKMKNSPMLVEALMDQKPISIACGANHT 182
>gi|398332633|ref|ZP_10517338.1| RCC1 domain-containing protein [Leptospira alexanderi serovar
Manhao 3 str. L 60]
Length = 527
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 137/322 (42%), Gaps = 61/322 (18%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WGN G+LG+G+ + R P + + + A G H L L G V
Sbjct: 223 WGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGIDDAVMGAY--GFNHALILKSDGTV 280
Query: 93 YATGLNDFGQLGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG N +S++P+ + GL+ +V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 281 VAFGQNNVGQLGNGANNLNADSFSMDPVAVVGLR-DVIQVIAGSEHSAALTENGEVYVWG 339
Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G+ +A IP KVE L GI KQ A G + +A+ G++ SWG S
Sbjct: 340 RNQYGNLGNGRLSAANAAQSIPVKVEGLPGI--KQIANGRDHILALASDGRIYSWGLNAS 397
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG G S TP + L + AG S
Sbjct: 398 GQLGIGGNGS--------PNPTPIPTQVLNILNASSVWAGGTQSF--------------- 434
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGC-LGIGSIDVLHSPERVQGPFSESPVDQ 325
S++ GE+ WG+N N L IG + L E + V
Sbjct: 435 ---------------SILKSGEVKGWGANGNTANLAIGETNTLKVYEPNKAVVGIDNVIH 479
Query: 326 VSCGWKHT-AAISEGKILTWGW 346
CG H + G+I WGW
Sbjct: 480 FGCGATHNFVLLGNGEIYGWGW 501
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 153/363 (42%), Gaps = 61/363 (16%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
L+ GGAH+ FL + G VY G N+FGQLG + G + + + I ++
Sbjct: 152 LSAGGAHSGFL-KNGEVYTAGRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNN 210
Query: 135 SSAITVDGELYMWGKNSNGQLGLGK--------KAAKVIPIPTKVECLSGIFTKQAALGF 186
S AI +G +Y WG N+ GQLG+G +AA PT V + A GF
Sbjct: 211 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGIDDAV--MGAYGF 268
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAAA 245
++ + G V+++G G+LG+G + L + S P + L V I A
Sbjct: 269 NHALILKSDGTVVAFGQNNVGQLGNGANN-----LNADSFSMDPVAVVGLRDVIQVI--A 321
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-P-------------------- 281
G HSA + ENG VY++G + N A+ P
Sbjct: 322 GSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAAQSIPVKVEGLPGIKQIANGRDHIL 381
Query: 282 SLISGGELYTWGSNENGCLGI---GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
+L S G +Y+WG N +G LGI GS + P +V + S V + G + + +
Sbjct: 382 ALASDGRIYSWGLNASGQLGIGGNGSPNPTPIPTQVLNILNASSV--WAGGTQSFSILKS 439
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG-ENVKALQVSCGFNHTG 397
G++ WG +G+++ +G N + P G +NV + CG H
Sbjct: 440 GEVKGWG---------ANGNTANLAIGETNTLKVYEPNKAVVGIDNV--IHFGCGATHNF 488
Query: 398 ALL 400
LL
Sbjct: 489 VLL 491
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 72/177 (40%), Gaps = 11/177 (6%)
Query: 42 LWGNGDYGRLGLGSLE----SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G L ++ PV +K +A G H L L G +Y+ GL
Sbjct: 337 VWGRNQYGNLGNGRLSAANAAQSIPVKVEGLP--GIKQIANGRDHILALASDGRIYSWGL 394
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N + P+ L + G S +I GE+ WG N N L
Sbjct: 395 NASGQLGIGGNGSPNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGANGNTANL 454
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+G+ + P K + GI G + + G G++ WG G LG
Sbjct: 455 AIGETNTLKVYEPNK--AVVGIDNVIHFGCGATHNFVLLGNGEIYGWGWNFKGSLGR 509
>gi|116331201|ref|YP_800919.1| RCC1 domain-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|116124890|gb|ABJ76161.1| RCC1 domain-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 506
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 134/322 (41%), Gaps = 61/322 (18%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WGN G+LG+G+ + R P + + A G H L L G V
Sbjct: 202 WGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMGAY--GFNHALILKSDGTV 259
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG N +S+ P+ + GL +V+Q+ G HS+A+T GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGANDLNADSFSMNPVAVVGLS-DVIQVIAGSEHSAALTESGEVYVWG 318
Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G+ +A + P KVE LSGI KQ A G + +A+ G++ SWG S
Sbjct: 319 RNQYGNLGNGRLSAANAIQSTPVKVEGLSGI--KQIANGRDHILALASDGRIYSWGLNAS 376
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG G S TP + L AG S I +N
Sbjct: 377 GQLGIGGNGS--------PNPTPNPTQVLNITNASSIWAGGTQSFSILKN---------- 418
Query: 267 VDKMLFQEGNHARRPSLISGGELYTWGSNENGC-LGIGSIDVLHSPERVQGPFSESPVDQ 325
GE+ WG+N N L IG + L E + V
Sbjct: 419 --------------------GEVKGWGANGNTANLAIGETNTLKVYEPNKAVVGIDNVIH 458
Query: 326 VSCGWKHT-AAISEGKILTWGW 346
CG H A + G+I WGW
Sbjct: 459 FGCGATHNFALLGNGEIYGWGW 480
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 149/364 (40%), Gaps = 63/364 (17%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
L+ GGAH+ FL + G VY G N+FGQLG + G + + + I ++
Sbjct: 131 LSAGGAHSGFL-KNGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNN 189
Query: 135 SSAITVDGELYMWGKNSNGQLGLGK--------KAAKVIPIPTKVECLSGIFTKQAALGF 186
S AIT +G +Y WG N+ GQLG+G +AA PT V ++ A GF
Sbjct: 190 SMAITKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAV--MGAYGF 247
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAAA 245
++ + G V+++G G+LG+G L + S P + L V I A
Sbjct: 248 NHALILKSDGTVVAFGQNNVGQLGNGAND-----LNADSFSMNPVAVVGLSDVIQVI--A 300
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRP-------------------- 281
G HSA + E+G VY++G + L P
Sbjct: 301 GSEHSAALTESGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSGIKQIANGRDHIL 360
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW----KHTAAIS 337
+L S G +Y+WG N +G LGIG SP P + S W + + +
Sbjct: 361 ALASDGRIYSWGLNASGQLGIGGNG---SPNPTPNPTQVLNITNASSIWAGGTQSFSILK 417
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG-ENVKALQVSCGFNHT 396
G++ WG +G+++ +G N + P G +NV + CG H
Sbjct: 418 NGEVKGWG---------ANGNTANLAIGETNTLKVYEPNKAVVGIDNV--IHFGCGATHN 466
Query: 397 GALL 400
ALL
Sbjct: 467 FALL 470
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 73/177 (41%), Gaps = 11/177 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G L + + PV +K +A G H L L G +Y+ GL
Sbjct: 316 VWGRNQYGNLGNGRLSAANAIQSTPVKVEGLS--GIKQIANGRDHILALASDGRIYSWGL 373
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N + P L I G S +I +GE+ WG N N L
Sbjct: 374 NASGQLGIGGNGSPNPTPNPTQVLNITNASSIWAGGTQSFSILKNGEVKGWGANGNTANL 433
Query: 156 GLGKKAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+G+ + P K V + + G + A+ G G++ WG G LG
Sbjct: 434 AIGETNTLKVYEPNKAVVGIDNVI--HFGCGATHNFALLGNGEIYGWGWNFKGSLGR 488
>gi|295789057|ref|NP_001171422.1| X-linked retinitis pigmentosa GTPase regulator isoform 2 [Mus
musculus]
gi|26325790|dbj|BAC26649.1| unnamed protein product [Mus musculus]
Length = 972
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 170/385 (44%), Gaps = 57/385 (14%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G + G+
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 239
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E +L RS P+ + + +++A G
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGG-- 290
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVL 308
G + ++ V Y +G + G LG+G+
Sbjct: 291 --------GHTVVLTEKVV----------------------YAFGLGQFGQLGLGTFLFE 320
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
S ++ + + +SCG HTA ++E G + T+G G HG LG
Sbjct: 321 TSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG-DGRHGKLG---------LGME 370
Query: 368 NDVDYIHPTIVNFGENVKALQVSCG 392
N + PT+ + ++CG
Sbjct: 371 NFTNQFFPTLCSNFLRFAVQLIACG 395
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 158/340 (46%), Gaps = 57/340 (16%)
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
+ +TG V+ FG+ +ENI P + + +S G H++ +T + +L
Sbjct: 45 LVPDTGAVFT-----FGKTKFAENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKL 94
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
YM+G N+ GQLGLG KAA I PT ++ L K AA G ++ T G V + G
Sbjct: 95 YMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGN 152
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LG G F + +TP +K +AG SA + E+G+++++GD
Sbjct: 153 NEGQLGLGDTDDRDTFHQIVF-FTP-------ADTIKQLSAGANTSAALTEDGKLFMWGD 204
Query: 265 RAVDKMLFQEGNHARRPSLIS--------------------GGELYTWGSNENGCLGIGS 304
+ ++ ++ ++ P ++ GELYT+G ENG LG+ +
Sbjct: 205 NSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPN 264
Query: 305 IDVLH--SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
+++ SP+RV G E V QV+CG HT ++E + +G G G
Sbjct: 265 ELLMNHRSPQRVLG-IPER-VIQVACGGGHTVVLTEKVVYAFGLG------------QFG 310
Query: 363 QLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QLG G + + P I+ ++ K +SCG NHT + E
Sbjct: 311 QLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 350
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 51/245 (20%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E + VTG K+ +G+ G+LG G +++I+ P IK L+ KVK+AA
Sbjct: 81 GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAA 131
Query: 245 AGFLHSACIDENGRVYIFG-------------DRAV--DKMLFQEGNHARRPS------- 282
G H+ + G VY G DR + F + ++ S
Sbjct: 132 CGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSA 191
Query: 283 -LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 340
L G+L+ WG N G +G+ + P V P+ +SCG+ H+A ++ +G+
Sbjct: 192 ALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT---VGKPISWISCGYYHSAFVTMDGE 248
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHTGA 398
+ T+G G+LG N++ H P V G + +QV+CG HT
Sbjct: 249 LYTFG------------EPENGKLGLPNELLMNHRSPQRV-LGIPERVIQVACGGGHTVV 295
Query: 399 LLEYV 403
L E V
Sbjct: 296 LTEKV 300
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 402
>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
Length = 328
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 119/225 (52%), Gaps = 15/225 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 109 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 168
Query: 103 LGISENIGYSLEPLRISG-LKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 169 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 226
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 227 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 283
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
P++++ L G K+ A G LH + ++G+VY +GD
Sbjct: 284 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 321
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 153/328 (46%), Gaps = 57/328 (17%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 37 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 96
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 97 ATALTVDGKVFWWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 154
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G++ +WG G GRLGHG +T++ P+++K L G +V + AC
Sbjct: 155 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRV-------IQVAC-- 196
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
G R A+ +L G +++WG + G LG G + + P+ +
Sbjct: 197 --------GSR-----------DAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 237
Query: 315 QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
+ + V Q+ CG + + A+++ G + TWG G +LGHG+DV
Sbjct: 238 E-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RLGHGSDVHVR 284
Query: 374 HPTIVNFGENVKALQVSCGFNHTGALLE 401
P +V K + V+ G H A+ +
Sbjct: 285 KPQVVEGLRGKKIVHVAVGALHCLAVTD 312
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 86/171 (50%), Gaps = 6/171 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG G ++ +P + H + +ACG A TL LT+ G V++ G DF
Sbjct: 161 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 220
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G ++ P I L + V QI G S A+T G ++ WGK +LG G
Sbjct: 221 GKLGRGGSEGCNI-PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 279
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+ P VE L G A+G +AVT G+V +WG G+ G
Sbjct: 280 DVH--VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 328
>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
Length = 1152
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 144/348 (41%), Gaps = 57/348 (16%)
Query: 43 WGNGDYGRLGLGSLESRWR--PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGNGD GRLG G ++ V+ + H G H + LT G VY+ G D
Sbjct: 215 WGNGDGGRLGHGDTNVCYKGQKVLVIVYPYHP------EGKHYMALTSEGEVYSWGNGDG 268
Query: 101 GQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LG + EP + GL + VV I G +S+AIT DGEL+ WG+ + G+L
Sbjct: 269 GRLGHGDTNSRE-EPTLVRGLSGKQLGRHVVHIVCGSTYSAAITADGELFTWGRGNYGRL 327
Query: 156 GLGKKAAKVIPIPTKVECLSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
G G ++ PT V L G + G Q++AVT G V SWG G G+LG G
Sbjct: 328 GHGSSEDQL--TPTLVVSLKGRRVIDICCGSGDAQTLAVTDDGTVWSWGDGDYGKLGRGG 385
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
S TP++I L+G + G S + + G ++ +G ++
Sbjct: 386 ---------SDGCKTPKIIDRLQGQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHG 436
Query: 274 EGNHARRPSLISG----------------------GELYTWGSNENGCLGIGSIDVLHSP 311
H R P + G GE+Y WG N+ G LG S P
Sbjct: 437 TEEHIRFPKQLEGLRGKKVVDVAVGSMHCLVMTEEGEVYGWGRNDQGQLGDSSFSTKSDP 496
Query: 312 ERVQGPFSESPVDQVSCG------WKHTAAISEGKILTWGWGGSHGTF 353
+ P + ++CG W T S G + + HGTF
Sbjct: 497 TLM--PLDGKSISGIACGPAQSFCWTSTGHWSVGLRVPFVVDVCHGTF 542
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 149/379 (39%), Gaps = 89/379 (23%)
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
C + + LAC + LT+TG VY + SE+ G L S K
Sbjct: 140 TCEMLGELGVLQLACAERCLIALTKTGRVYMCFYS-------SESQGPQLME---SLADK 189
Query: 124 EVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGK-----KAAKVIPI--PTKVECL 174
EV++++ H A+T +GE+Y WG G+LG G K KV+ I P E
Sbjct: 190 EVLKVAAHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNVCYKGQKVLVIVYPYHPEG- 248
Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
+ +A+T G+V SWG G GRLGHG + S P L++
Sbjct: 249 ------------KHYMALTSEGEVYSWGNGDGGRLGHGD---------TNSREEPTLVRG 287
Query: 235 LEGVK----VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI------ 284
L G + V G +SA I +G ++ +G ++ P+L+
Sbjct: 288 LSGKQLGRHVVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGR 347
Query: 285 ------------------SGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPV 323
G +++WG + G LG G D +P +R+QG +
Sbjct: 348 RVIDICCGSGDAQTLAVTDDGTVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQG----QDI 403
Query: 324 DQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 382
+V CG + + A+++ G I TWG G S +LGHG + P +
Sbjct: 404 VRVCCGAQFSLALTKTGHIWTWGKGDSQ------------RLGHGTEEHIRFPKQLEGLR 451
Query: 383 NVKALQVSCGFNHTGALLE 401
K + V+ G H + E
Sbjct: 452 GKKVVDVAVGSMHCLVMTE 470
>gi|226495691|ref|NP_001141854.1| uncharacterized protein LOC100273996 [Zea mays]
gi|194706180|gb|ACF87174.1| unknown [Zea mays]
Length = 391
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 151/366 (41%), Gaps = 67/366 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LG+G E + A +++ A+ G ++L + E G ++ G N G
Sbjct: 13 WGSGEDGQLGMGGNEEKDWAHCVEALGSYAVTAVVAGSRNSLAICEDGRLFTWGWNQRGT 72
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL---- 157
LG P + L ++VQ + G H A+ +G Y WG N GQ G
Sbjct: 73 LGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDNGHAYAWGGNEYGQCGEEPER 132
Query: 158 ---GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
G +A + IPT C + +Q A G SV +T G V +WG +
Sbjct: 133 KEDGTRALRR-DIPTPQRCAPKLKVRQVAAGGTHSVVLTQEGHVWTWG-----------Q 180
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
G ++ S TP ++ LE KV++ A G H+ + E+G
Sbjct: 181 PWPPGDIKQIS--TPVRVQGLE--KVRVIAVGAFHNLALTEDGI---------------- 220
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
L+ WG+NE G LG G P RV+G S VD + GW TA
Sbjct: 221 --------------LWAWGNNEYGQLGTGDTQPRSHPIRVEGLSDLSLVDIAAGGWHSTA 266
Query: 335 AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND-VDYIHPTIVNFGENVKALQVSCGF 393
+G++ WG G H G+LG G+D + P V +QVSCG
Sbjct: 267 LTIQGEVYAWG-RGEH-----------GRLGFGDDKSSRMVPLKVELLAGEDIVQVSCGG 314
Query: 394 NHTGAL 399
H+ AL
Sbjct: 315 THSVAL 320
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 96/155 (61%), Gaps = 7/155 (4%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV EK ++ +A G H L LTE G ++A G N++GQLG + S P+R+ GL
Sbjct: 193 PVRVQGLEK--VRVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRS-HPIRVEGL 249
Query: 122 KK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK-KAAKVIPIPTKVECLSGIFT 179
+V I+ G HS+A+T+ GE+Y WG+ +G+LG G K+++++P+ KVE L+G
Sbjct: 250 SDLSLVDIAAGGWHSTALTIQGEVYAWGRGEHGRLGFGDDKSSRMVPL--KVELLAGEDI 307
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
Q + G SVA+T G++ S+G G GRLG+G++
Sbjct: 308 VQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRK 342
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 85/156 (54%), Gaps = 2/156 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG+LG G + R P+ SL +A GG H+ LT G VYA G + G+
Sbjct: 224 WGNNEYGQLGTGDTQPRSHPIRVEGLSDLSLVDIAAGGWHSTALTIQGEVYAWGRGEHGR 283
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ + PL++ L +++VQ+S G HS A+T DG ++ +G+ +G+LG G+K
Sbjct: 284 LGFGDDKSSRMVPLKVELLAGEDIVQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKL 343
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
P+ ++ L T+ + G Q+ V GG+
Sbjct: 344 TTGQPMGVDID-LPPPKTRSSRDGQWQAKYVACGGR 378
>gi|295789055|ref|NP_001171421.1| X-linked retinitis pigmentosa GTPase regulator isoform 1 [Mus
musculus]
Length = 1039
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 170/385 (44%), Gaps = 57/385 (14%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G + G+
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 239
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E +L RS P+ + + +++A G
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGG-- 290
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVL 308
G + ++ V Y +G + G LG+G+
Sbjct: 291 --------GHTVVLTEKVV----------------------YAFGLGQFGQLGLGTFLFE 320
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
S ++ + + +SCG HTA ++E G + T+G G HG LG
Sbjct: 321 TSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG-DGRHGKLG---------LGME 370
Query: 368 NDVDYIHPTIVNFGENVKALQVSCG 392
N + PT+ + ++CG
Sbjct: 371 NFTNQFFPTLCSNFLRFAVQLIACG 395
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 158/340 (46%), Gaps = 57/340 (16%)
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
+ +TG V+ FG+ +ENI P + + +S G H++ +T + +L
Sbjct: 45 LVPDTGAVFT-----FGKTKFAENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKL 94
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
YM+G N+ GQLGLG KAA I PT ++ L K AA G ++ T G V + G
Sbjct: 95 YMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGN 152
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LG G F + +TP +K +AG SA + E+G+++++GD
Sbjct: 153 NEGQLGLGDTDDRDTFHQIVF-FTP-------ADTIKQLSAGANTSAALTEDGKLFMWGD 204
Query: 265 RAVDKMLFQEGNHARRPSLIS--------------------GGELYTWGSNENGCLGIGS 304
+ ++ ++ ++ P ++ GELYT+G ENG LG+ +
Sbjct: 205 NSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPN 264
Query: 305 IDVLH--SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
+++ SP+RV G E V QV+CG HT ++E + +G G G
Sbjct: 265 ELLMNHRSPQRVLG-IPER-VIQVACGGGHTVVLTEKVVYAFGLG------------QFG 310
Query: 363 QLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QLG G + + P I+ ++ K +SCG NHT + E
Sbjct: 311 QLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 350
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 51/245 (20%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E + VTG K+ +G+ G+LG G +++I+ P IK L+ KVK+AA
Sbjct: 81 GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAA 131
Query: 245 AGFLHSACIDENGRVYIFG-------------DRAV--DKMLFQEGNHARRPS------- 282
G H+ + G VY G DR + F + ++ S
Sbjct: 132 CGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSA 191
Query: 283 -LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 340
L G+L+ WG N G +G+ + P V P+ +SCG+ H+A ++ +G+
Sbjct: 192 ALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT---VGKPISWISCGYYHSAFVTMDGE 248
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHTGA 398
+ T+G G+LG N++ H P V G + +QV+CG HT
Sbjct: 249 LYTFG------------EPENGKLGLPNELLMNHRSPQRV-LGIPERVIQVACGGGHTVV 295
Query: 399 LLEYV 403
L E V
Sbjct: 296 LTEKV 300
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 402
>gi|115476524|ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group]
gi|38175475|dbj|BAD01172.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
gi|113623827|dbj|BAF23772.1| Os08g0430700 [Oryza sativa Japonica Group]
gi|215734996|dbj|BAG95718.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640598|gb|EEE68730.1| hypothetical protein OsJ_27407 [Oryza sativa Japonica Group]
Length = 395
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 149/367 (40%), Gaps = 69/367 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LG+G E +A + ++ A+ G ++L + G ++ G N G
Sbjct: 16 WGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTWGWNQRGT 75
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL---- 157
LG P + L +VQ + G H A+ G Y WG N GQ G
Sbjct: 76 LGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEAER 135
Query: 158 ---GKKA-AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
G +A + IPIP C + +Q A G SV +T G V +WG
Sbjct: 136 KEDGTRALRRDIPIPQG--CAPKLKVRQVAAGGTHSVVLTQDGHVWTWG----------- 182
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
+ G ++ S TP ++ LE VK+ A G H+ + E+G
Sbjct: 183 QPWPPGDIKQIS--TPVRVQGLE--NVKVIAVGAFHNLALTEDGI--------------- 223
Query: 274 EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 333
L+ WG+NE G LG G P RV+G S VD + GW T
Sbjct: 224 ---------------LWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHST 268
Query: 334 AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND-VDYIHPTIVNFGENVKALQVSCG 392
A EG++ WG G H G+LG G+D ++ P V +QVSCG
Sbjct: 269 ALTKEGEVYAWG-RGEH-----------GRLGFGDDKSSHMVPQKVELLAGEDIIQVSCG 316
Query: 393 FNHTGAL 399
H+ AL
Sbjct: 317 GTHSVAL 323
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 93/154 (60%), Gaps = 5/154 (3%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV E ++K +A G H L LTE G ++A G N++GQLG + S +P+R+ GL
Sbjct: 196 PVRVQGLE--NVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRS-QPIRVEGL 252
Query: 122 KK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
+V I+ G HS+A+T +GE+Y WG+ +G+LG G + + +P KVE L+G
Sbjct: 253 SDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHM-VPQKVELLAGEDII 311
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
Q + G SVA+T G++ S+G G GRLG+G++
Sbjct: 312 QVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRK 345
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 136/308 (44%), Gaps = 47/308 (15%)
Query: 40 AALWGNGDYGRLGLGSLES--------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
A WG +YG+ G + R P+ K ++ +A GG H++ LT+ G
Sbjct: 118 AYAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQGCAPKLKVRQVAAGGTHSVVLTQDGH 177
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ +GQ +I P+R+ GL+ V I+ G H+ A+T DG L+ WG N
Sbjct: 178 VWT-----WGQPWPPGDIKQISTPVRVQGLEN-VKVIAVGAFHNLALTEDGILWAWGNNE 231
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
GQLG G + PI +VE LS + A G S A+T G+V +WG G GRLG
Sbjct: 232 YGQLGTGDTQPRSQPI--RVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGF 289
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G + S S P+ ++ L G + + G HS + +GR++ +G
Sbjct: 290 GDDKS--------SHMVPQKVELLAGEDIIQVSCGGTHSVALTRDGRMFSYG-------- 333
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS--ESPVDQVSCG 329
G+H R L G ++ T E + + P G S + V+CG
Sbjct: 334 --RGDHGR---LGYGRKVTTGHPME--------VPIDLPPPGTSGGDSGGQWQARYVACG 380
Query: 330 WKHTAAIS 337
+HT AI+
Sbjct: 381 GRHTLAIA 388
>gi|156406658|ref|XP_001641162.1| predicted protein [Nematostella vectensis]
gi|156228299|gb|EDO49099.1| predicted protein [Nematostella vectensis]
Length = 596
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 165/370 (44%), Gaps = 63/370 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G LG G P V A ++ +ACG HTL L++ G V++ G G+
Sbjct: 212 WGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLALSKDGEVFSWGSGYGGR 271
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITV---DGELYMWGKNSNGQLGLG 158
LG ++ P+RI GL+ + Q++ HS+A+ G L+ +G+N GQLG+
Sbjct: 272 LG-QGHLRDRFTPIRICGLESLNLTQVACNEFHSAAVCACSKQGALFSFGENDYGQLGIP 330
Query: 159 KKAAKVIPIPTKVECLSGIF---TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+ + + ++C+S + + A G S A+ G + WG SG+LG+G
Sbjct: 331 EDKL----LTSYIQCVSSLSEHKISRVACGSFHSAALAEHGSLWLWGCNESGQLGNGN-- 384
Query: 216 SILGFLRSTSEYTPRLIK---ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
TS P L++ +L V A G HSA I + GR++ GD ++
Sbjct: 385 -------YTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNTYGQL-- 435
Query: 273 QEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 332
G L N+N + + RV+ P V V+CG H
Sbjct: 436 -------------GAHL-----NDNQDDHV----TYNVAVRVRVPTDFRCV-HVACGDSH 472
Query: 333 TAAISEG-KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VS 390
TA +++G +I TWG G GG+LGHG++++ PT + G K ++ VS
Sbjct: 473 TAVVTDGGEIFTWGRG------------KGGRLGHGDNLNRHLPTEIEIGMEGKHVRGVS 520
Query: 391 CGFNHTGALL 400
CG HT +
Sbjct: 521 CGRAHTACTV 530
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 116/258 (44%), Gaps = 52/258 (20%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
++Y WG+ +NG LG G+ + P VE L G ++ A G ++A++ G+V SWG
Sbjct: 208 DIYTWGEGTNGMLGHGEDTQEA--HPHVVEALLGKDIRKVACGATHTLALSKDGEVFSWG 265
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+G GRLG G LR +TP I LE + + A HSA +
Sbjct: 266 SGYGGRLGQGH-------LR--DRFTPIRICGLESLNLTQVACNEFHSAAV--------- 307
Query: 263 GDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
+ G L+++G N+ G LGI +L S + SE
Sbjct: 308 ------------------CACSKQGALFSFGENDYGQLGIPEDKLLTSYIQCVSSLSEHK 349
Query: 323 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 382
+ +V+CG H+AA++E L W WG + GQLG+GN P+++ G
Sbjct: 350 ISRVACGSFHSAALAEHGSL-WLWGC----------NESGQLGNGNYTSTSLPSLLEAGN 398
Query: 383 NVK---ALQVSCGFNHTG 397
+++ ++V+CG H+
Sbjct: 399 DLRHDAVMEVACGDQHSA 416
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSA---FEKHSLKALACGGAHTLFLTETGCVYATGLN 98
LWG + G+LG G+ S P + A ++ +ACG H+ F+T+ G ++ G N
Sbjct: 371 LWGCNESGQLGNGNYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDN 430
Query: 99 DFGQLGI------SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
+GQLG +++ Y++ V ++ G H++ +T GE++ WG+
Sbjct: 431 TYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVTDGGEIFTWGRGKG 490
Query: 153 GQLGLGKKAAKVIPIPTKV 171
G+LG G + +P ++
Sbjct: 491 GRLGHGDNLNRHLPTEIEI 509
>gi|156396924|ref|XP_001637642.1| predicted protein [Nematostella vectensis]
gi|156224756|gb|EDO45579.1| predicted protein [Nematostella vectensis]
Length = 1152
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 146/325 (44%), Gaps = 43/325 (13%)
Query: 39 FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA----HTLFLTETGCVYA 94
F G G YGRLGLG ++ + + F+ L HTL LT G VY+
Sbjct: 415 FVHACGKGSYGRLGLGDSTNQTQLKRLN-FDNECLVKSVSSSKGSDGHTLALTLDGKVYS 473
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G D+G+LG + + L L K V I+ GY HS+A+T DGELY WG+ G
Sbjct: 474 WGDGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVTEDGELYTWGEGDYG 533
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHG 212
+LG G ++ +P+ K G Q A G +V V+ G+ V S+G+G +G+LGH
Sbjct: 534 RLGHGDNNSRNVPVQVKDVANVG----QVACGSAHTVCVSQDGQTVWSFGSGDNGKLGHS 589
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--------- 263
+ + Y P++I+ L+G+ ++ G S + G+VY++G
Sbjct: 590 DTNRV---------YKPKVIEALQGMVIRKVCCGSQCSLALTSTGQVYVWGCGPSLGTGS 640
Query: 264 ---DRAVDKMLFQEGNHARRP---------SLISGGELYTWGSNENGCLGIGSIDV-LHS 310
A K+L +H+ +L +Y WG+N G G G +
Sbjct: 641 VDATSATPKLLLALQSHSVVDISVGDSHCVALTQDNNVYAWGNNSMGQCGQGHCTTPITK 700
Query: 311 PERVQGPFSESPVDQVSCGWKHTAA 335
P++V G V Q+S G HT A
Sbjct: 701 PKKVLG-LDGVAVHQISAGTSHTVA 724
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 116/276 (42%), Gaps = 56/276 (20%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA--AKVIPIPTKVECLSGIFTKQAAL 184
QI G + + I DG ++ GK S G+LGLG ++ + ECL +
Sbjct: 399 QIEAGQYCTFVIFPDGFVHACGKGSYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSSKG- 457
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA- 243
++A+T GKV SWG G G+LGHG S ++ P+L++ G KV
Sbjct: 458 SDGHTLALTLDGKVYSWGDGDYGKLGHG---------NSQTQKIPKLVEGALGNKVVCCI 508
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
AAG+ HSA + E+ GELYTWG + G LG G
Sbjct: 509 AAGYRHSAAVTED------------------------------GELYTWGEGDYGRLGHG 538
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ + P +V+ + V QV+CG HT +S+ W +G G+
Sbjct: 539 DNNSRNVPVQVK---DVANVGQVACGSAHTVCVSQDGQTVWSFGS----------GDNGK 585
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LGH + P ++ + + +V CG + AL
Sbjct: 586 LGHSDTNRVYKPKVIEALQGMVIRKVCCGSQCSLAL 621
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 105/266 (39%), Gaps = 59/266 (22%)
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF--TKQAALGFEQSVA 191
H ++ + E+Y+WG NS+ QL G ++P L+ F +Q G +
Sbjct: 356 HGNSFASNEEVYVWGSNSSHQLAEGSMDKILVPK------LATSFGSAQQIEAGQYCTFV 409
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+ G V + G G GRLG G ++ R + E V + H+
Sbjct: 410 IFPDGFVHACGKGSYGRLGLGDSTNQTQLKRLNFD------NECLVKSVSSSKGSDGHTL 463
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSP 311
+ +G+VY +WG + G LG G+ P
Sbjct: 464 ALTLDGKVY------------------------------SWGDGDYGKLGHGNSQTQKIP 493
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+ V+G V ++ G++H+AA++E G++ TWG G G+LGHG++
Sbjct: 494 KLVEGALGNKVVCCIAAGYRHSAAVTEDGELYTWGEGDY------------GRLGHGDNN 541
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHT 396
P V NV QV+CG HT
Sbjct: 542 SRNVPVQVKDVANVG--QVACGSAHT 565
>gi|395855000|ref|XP_003799962.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Otolemur
garnettii]
Length = 816
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 148/314 (47%), Gaps = 50/314 (15%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HT+ TE G VYATG N+ G
Sbjct: 58 MFGSNNWGQLGLGSKAAVNKPTCIKALKPEKVKFAACGRTHTIISTEGGNVYATGGNNEG 117
Query: 102 QLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG+ E + L S K + Q+S G + S+A+T DG+L+MWG NS GQ+GL
Sbjct: 118 QLGLGDTDERDTFHLISFFTSQHK--IKQLSAGSNTSAALTEDGQLFMWGDNSEGQIGL- 174
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
K + +P +V G + G+ S VT G++ ++G SG+L G S +L
Sbjct: 175 -KDVTNVCVPHQVTI--GKPISWISCGYYHSAFVTIDGELYTFGESESGKL--GLPSQLL 229
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
T+ P+L+ + +++A G G + + +V
Sbjct: 230 -----TNHRIPQLVSSIPDKVIQVACGG----------GHTLVLTEESV----------- 263
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
Y +G + G LG+G+ S +V + +SCG HTA I++
Sbjct: 264 -----------YAFGLGQFGQLGLGTFIFETSEPKVLEYVKGEKIISISCGENHTAMITD 312
Query: 339 -GKILTWGWGGSHG 351
G I T+G G HG
Sbjct: 313 TGGIYTFG-DGRHG 325
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 159/345 (46%), Gaps = 67/345 (19%)
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
+ ++G V+ FG+ +ENI P + + +S G HS+ +T + +L
Sbjct: 7 LVPDSGAVFT-----FGKTKFAENI-----PSKFWFKSDTPICLSCGDEHSAIVTGNNKL 56
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
YM+G N+ GQLGLG KAA + PT ++ L K AA G ++ T GG V + G
Sbjct: 57 YMFGSNNWGQLGLGSKAA--VNKPTCIKALKPEKVKFAACGRTHTIISTEGGNVYATGGN 114
Query: 205 GSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
G+LG G ++ F TS++ K+K +AG SA + E+G++
Sbjct: 115 NEGQLGLGDTDERDTFHLISFF--TSQH-----------KIKQLSAGSNTSAALTEDGQL 161
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLIS--------------------GGELYTWGSNENGC 299
+++GD + ++ ++ + P ++ GELYT+G +E+G
Sbjct: 162 FMWGDNSEGQIGLKDVTNVCVPHQVTIGKPISWISCGYYHSAFVTIDGELYTFGESESGK 221
Query: 300 LGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 357
LG+ S L + R+ S P V QV+CG HT ++E + +G G
Sbjct: 222 LGLPS--QLLTNHRIPQLVSSIPDKVIQVACGGGHTLVLTEESVYAFGLG---------- 269
Query: 358 HSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GQLG G + + P ++ + + K + +SCG NHT + +
Sbjct: 270 --QFGQLGLGTFIFETSEPKVLEYVKGEKIISISCGENHTAMITD 312
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 75/134 (55%), Gaps = 7/134 (5%)
Query: 43 WGNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G + G+LGL S L + P + S+ ++ +ACGG HTL LTE VYA GL F
Sbjct: 214 FGESESGKLGLPSQLLTNHRIPQLVSSIPDKVIQ-VACGGGHTLVLTEES-VYAFGLGQF 271
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+ I + EP + +K E ++ IS G +H++ IT G +Y +G +G+LGLG
Sbjct: 272 GQLGLGTFIFETSEPKVLEYVKGEKIISISCGENHTAMITDTGGIYTFGDGRHGKLGLGL 331
Query: 160 K--AAKVIPIPTKV 171
+ + P P V
Sbjct: 332 ENFTNRFFPTPCSV 345
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 14/71 (19%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G+G +G+LGLG + +R+ P CS F K ++ +ACGG H L V+AT
Sbjct: 319 FGDGRHGKLGLGLENFTNRFFPTPCSVFLKFMVQLVACGGCHML-------VFAT----- 366
Query: 101 GQLGISENIGY 111
Q G++E + +
Sbjct: 367 PQAGMAEELEF 377
>gi|383319251|ref|YP_005380092.1| chromosome condensation regulator RCC1 [Methanocella conradii
HZ254]
gi|379320621|gb|AFC99573.1| regulator of chromosome condensation RCC1 [Methanocella conradii
HZ254]
Length = 447
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 141/312 (45%), Gaps = 40/312 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG LG G+ E+ PV + +KA++ G +L L G V+A G N +GQ
Sbjct: 94 WGSNSYGELGDGTNENSIEPVQVAGLT--GVKAISAGKGFSLALKGDGSVWAWGSNTYGQ 151
Query: 103 LGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + SL P+++ GL+ VV IS G H A+ +G L+ WG+NS+G LG G
Sbjct: 152 LGKNPLSFMGSLTPIQVEGLEG-VVSISCGGSHCFALQENGVLWAWGENSHGILGDGTNE 210
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG----QESSI 217
++ P+ K++ + + ++AV G V +WG G+LG G +
Sbjct: 211 SQFKPVKPKIKDVKAFDAGE----LSHALAVKEDGSVWAWGFNYKGQLGTGGVSLSDQGR 266
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE--G 275
+ R Y P +++ + K AAG HS + +G V+ +G + ++ G
Sbjct: 267 ISLGREADNYNPDIVRGVS--DAKAVAAGGSHSVALASDGSVWAWGSNSDGQLGLGHAGG 324
Query: 276 NHARRPSLISG--------------------GELYTWGSNENGCLGIGSIDVLHSPERV- 314
+ P+ + G G ++ WGSN +G LG S SP +
Sbjct: 325 SDVTSPTRVQGIEGVTAIAAGMYHTLALKGDGSVWAWGSNSDGQLGNASFSAASSPVPIL 384
Query: 315 ---QGPFSESPV 323
Q P + SP
Sbjct: 385 IGPQIPTAASPT 396
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 158/362 (43%), Gaps = 78/362 (21%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLRISGLKKEVVQISTGYH 133
A+A ++ L E G V+ G + + + +S + + ISG++ QI+ G
Sbjct: 32 AIAASNCTSVALLEDGSVWQWGR-------VCDGVEWSAPQRVDISGVR----QIAAGSG 80
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H A+ DG ++ WG NS G+LG G + P+ +V L+G+ A GF S+A+
Sbjct: 81 HVLALKGDGTVWAWGSNSYGELGDGTNENSIEPV--QVAGLTGVKAISAGKGF--SLALK 136
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G G V +WG+ G+LG + L F+ S TP ++ LEGV V I+ G H +
Sbjct: 137 GDGSVWAWGSNTYGQLGK----NPLSFMGS---LTPIQVEGLEGV-VSISCGGS-HCFAL 187
Query: 254 DENGRVYIFGD--------------------RAVDKMLFQEGNHARRPSLISGGELYTWG 293
ENG ++ +G+ + D F G + ++ G ++ WG
Sbjct: 188 QENGVLWAWGENSHGILGDGTNESQFKPVKPKIKDVKAFDAGELSHALAVKEDGSVWAWG 247
Query: 294 SNENGCLGIGSIDVL-------------HSPERVQGPFSESPVDQVSCGWKHTAAI-SEG 339
N G LG G + + ++P+ V+G S V+ G H+ A+ S+G
Sbjct: 248 FNYKGQLGTGGVSLSDQGRISLGREADNYNPDIVRG---VSDAKAVAAGGSHSVALASDG 304
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQ--LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
+ W G +S GQ LGH D PT V E V A ++ G HT
Sbjct: 305 SVWAW------------GSNSDGQLGLGHAGGSDVTSPTRVQGIEGVTA--IAAGMYHTL 350
Query: 398 AL 399
AL
Sbjct: 351 AL 352
>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
carolinensis]
Length = 526
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ + P + + + +ACG H++ LT G VY G N+ G
Sbjct: 99 WGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTSDGEVYTWGYNNSG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G ++ P R++ K V I+ G S A+ +GE+Y+WG N NGQLGLG
Sbjct: 159 QVGSGSTANQAI-PRRVTSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P ++ L GI ++ A G+ ++ +T G++ +WGA G+LG G
Sbjct: 218 SGNQ--PTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTGN------ 269
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG-RVYIFG 263
RS Y + + + V ++IAA H++ G +VY++G
Sbjct: 270 --RSNQSYPVPITVDKDRV-IEIAACHSAHTSAAKTQGSQVYMWG 311
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 132/306 (43%), Gaps = 45/306 (14%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG+G ++ P + L+ G G H + T G VY G N + QLG +
Sbjct: 52 GCLGVGDTQNSVEPRRLDTLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
SL P +IS + K+V +++ G HHS +T DGE+Y WG N++GQ+G G A + I
Sbjct: 111 TTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTSDGEVYTWGYNNSGQVGSGSTANQAI 170
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P CL A G S+AV G+V WG G+G+LG G S +
Sbjct: 171 PRRV-TSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGN---------SGN 220
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
+ TP I L+G++V+ A G+ H+ + +
Sbjct: 221 QPTPCRIAALQGIRVQRVACGYAHTLVLTDE----------------------------- 251
Query: 286 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 345
G++Y WG+N G LG G+ P + + ++ +C HT+A +
Sbjct: 252 -GQMYAWGANSYGQLGTGNRSNQSYPVPITVD-KDRVIEIAACHSAHTSAAKTQGSQVYM 309
Query: 346 WGGSHG 351
WG G
Sbjct: 310 WGQCRG 315
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 147/348 (42%), Gaps = 62/348 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L++TE V+A G N G LG+ + S+E
Sbjct: 6 KWPIFAFRSPEELKLIRQACVFGSAGNEVLYVTENNEVFALGTNCSGCLGVGDTQN-SVE 64
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE+Y WG N+ QLG G ++P
Sbjct: 65 PRRLDTLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLGNGTTNNSLLPCQISTN 124
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
++ T + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 125 LVNKKVT-EVACGSHHSMILTSDGEVYTWGYNNSGQVGSGS---------TANQAIPRRV 174
Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYT 291
K+ + A G + S + ENG VY+
Sbjct: 175 TSCLQNKIAVNIACGQMCSMAVVENGEVYV------------------------------ 204
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSH 350
WG N NG LG+G+ +P R+ V +V+CG+ HT ++ EG++ WG
Sbjct: 205 WGYNGNGQLGLGNSGNQPTPCRI-AALQGIRVQRVACGYAHTLVLTDEGQMYAWG----- 258
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +P + ++ +C HT A
Sbjct: 259 -------ANSYGQLGTGNRSNQSYPVPITVDKDRVIEIAACHSAHTSA 299
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 108/269 (40%), Gaps = 60/269 (22%)
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTG 194
+T + E++ G N +G LG+G V P +++ L G K L + V T
Sbjct: 37 VTENNEVFALGTNCSGCLGVGDTQNSVEP--RRLDTLCG--KKITCLSYGSGPHVVVATA 92
Query: 195 GGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V +WG +LG+G +S+L ST+ L KV A G HS
Sbjct: 93 EGEVYTWGHNAYSQLGNGTTNNSLLPCQISTN---------LVNKKVTEVACGSHHSMI- 142
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
L S GE+YTWG N +G +G GS P R
Sbjct: 143 -----------------------------LTSDGEVYTWGYNNSGQVGSGSTANQAIPRR 173
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V ++CG + A+ E G++ WG+ G+ GQLG GN +
Sbjct: 174 VTSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGN------------GQLGLGNSGNQ 221
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGALLE 401
P + + ++ +V+CG+ HT L +
Sbjct: 222 PTPCRIAALQGIRVQRVACGYAHTLVLTD 250
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 204 VWGYNGNGQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P+ I+ K V++I+ + H S+A T ++YMWG+ GQ
Sbjct: 264 QLGTGNRSNQSY-PVPITVDKDRVIEIAACHSAHTSAAKTQGSQVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ +P T C +F
Sbjct: 317 --SITLPYLTHFACTDDVF 333
>gi|260791114|ref|XP_002590585.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
gi|229275780|gb|EEN46596.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
Length = 710
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 108/224 (48%), Gaps = 14/224 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+ D+G+LGLG ++ +P + + K +ACG +HTL T G VY G GQ
Sbjct: 59 FGSNDWGQLGLGHTKTASKPSCVKSLKHEKAKLVACGRSHTLIATGDGKVYVWGGGSEGQ 118
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ E+ EP + + + +S GY+H++ +T DG LY +G+ G+LGL
Sbjct: 119 LGLGEDTTECTEPTLLD-FDSKAISVSCGYYHTAVVTEDGNLYTFGETEYGKLGLNNSDL 177
Query: 163 KVIPIPTKVECLSGIFTKQ--AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P KV +GI K G + A+ G V ++G G SG+LGHG
Sbjct: 178 DSSDTPQKV---TGIKEKVKFVVCGGGHTTAIAESGAVYTFGNGASGQLGHGN-----SL 229
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
L S TP ++ K A+ G +A I G +Y FGD
Sbjct: 230 LESP---TPHRVERFRDADCKHASCGENFTAVITGKGHLYTFGD 270
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 137/318 (43%), Gaps = 70/318 (22%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
+ ETG ++ FG+ +ENI +R + ++ G H++ +T +G LY
Sbjct: 8 VPETGAIFT-----FGKSKFAENISSKFW-IR----NDRICAVACGDEHTALVTENGRLY 57
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
+G N GQLGLG K P+ V+ L K A G ++ TG GKV WG G
Sbjct: 58 TFGSNDWGQLGLGH--TKTASKPSCVKSLKHEKAKLVACGRSHTLIATGDGKVYVWGGGS 115
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LG G++ T+E T + + + + + + G+ H+A + E+G
Sbjct: 116 EGQLGLGED---------TTECTEPTLLDFDSKAISV-SCGYYHTAVVTEDGN------- 158
Query: 266 AVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHS--PERVQGPFSESPV 323
LYT+G E G LG+ + D+ S P++V G + V
Sbjct: 159 -----------------------LYTFGETEYGKLGLNNSDLDSSDTPQKVTG--IKEKV 193
Query: 324 DQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND-VDYIHPTIVNFG 381
V CG HT AI+E G + T+G G S GQLGHGN ++ P V
Sbjct: 194 KFVVCGGGHTTAIAESGAVYTFGNGAS------------GQLGHGNSLLESPTPHRVERF 241
Query: 382 ENVKALQVSCGFNHTGAL 399
+ SCG N T +
Sbjct: 242 RDADCKHASCGENFTAVI 259
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 109/213 (51%), Gaps = 10/213 (4%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G G+LGLG + F+ ++ +++CG HT +TE G +Y G ++G
Sbjct: 110 VWGGGSEGQLGLGEDTTECTEPTLLDFDSKAI-SVSCGYYHTAVVTEDGNLYTFGETEYG 168
Query: 102 QLGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG++ ++ S P +++G+K++V + G H++AI G +Y +G ++GQLG G
Sbjct: 169 KLGLNNSDLDSSDTPQKVTGIKEKVKFVVCGGGHTTAIAESGAVYTFGNGASGQLGHGNS 228
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P P +VE K A+ G + +TG G + ++G G G+LG G ES
Sbjct: 229 LLES-PTPHRVERFRDADCKHASCGENFTAVITGKGHLYTFGDGRHGKLGLGDES----- 282
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
T+++ P + +V+ A G H I
Sbjct: 283 --FTNQFRPFKVARFNKFQVQWVACGGCHMMVI 313
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 136/289 (47%), Gaps = 39/289 (13%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYH 133
A+ACG HT +TE G +Y G ND+GQLG+ S +P + LK E + ++ G
Sbjct: 39 AVACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTAS-KPSCVKSLKHEKAKLVACGRS 97
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H+ T DG++Y+WG S GQLGLG+ + PT ++ S + + G+ + VT
Sbjct: 98 HTLIATGDGKVYVWGGGSEGQLGLGEDTTECT-EPTLLDFDSKAIS--VSCGYYHTAVVT 154
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G + ++G G+LG L S TP+ + ++ KVK G H+ I
Sbjct: 155 EDGNLYTFGETEYGKLG-------LNNSDLDSSDTPQKVTGIK-EKVKFVVCGGGHTTAI 206
Query: 254 DENGRVYIFGDRA------------------VDKMLFQEGNHA----RRPSLISG-GELY 290
E+G VY FG+ A V++ + HA ++I+G G LY
Sbjct: 207 AESGAVYTFGNGASGQLGHGNSLLESPTPHRVERFRDADCKHASCGENFTAVITGKGHLY 266
Query: 291 TWGSNENGCLGIGSIDVLHS--PERVQGPFSESPVDQVSCGWKHTAAIS 337
T+G +G LG+G + P +V F++ V V+CG H I+
Sbjct: 267 TFGDGRHGKLGLGDESFTNQFRPFKV-ARFNKFQVQWVACGGCHMMVIA 314
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 59/121 (48%), Gaps = 17/121 (14%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKI 341
+ G LYT+GSN+ G LG+G P V+ V+CG HT A +GK+
Sbjct: 50 VTENGRLYTFGSNDWGQLGLGHTKTASKPSCVKS-LKHEKAKLVACGRSHTLIATGDGKV 108
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALL 400
WG G S GQLG G D + PT+++F + KA+ VSCG+ HT +
Sbjct: 109 YVWGGG------------SEGQLGLGEDTTECTEPTLLDF--DSKAISVSCGYYHTAVVT 154
Query: 401 E 401
E
Sbjct: 155 E 155
>gi|328712024|ref|XP_001948029.2| PREDICTED: hypothetical protein LOC100158844 [Acyrthosiphon pisum]
Length = 1626
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 160/374 (42%), Gaps = 81/374 (21%)
Query: 43 WGNGDYGRLGLGSLESRW---RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ YG LG+G ++ PV + + + +ACG H++ LT G VY+ G N
Sbjct: 818 WGHSSYGCLGVGPHMTKTATPNPVSWFVYIRVEVIQVACGRNHSIALTTNG-VYSWGSNH 876
Query: 100 FGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+GQLG G + P+ + L E +V +S G +HS AI+ G+L+ WG GQLG G
Sbjct: 877 YGQLGTGRR-GQAPYPMLVDSLSNELIVSVSAGQYHSLAISASGQLWTWGWGVYGQLGHG 935
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A P ++ L A G+ S+ +T GKV ++G+G G+LG+G + I
Sbjct: 936 --AIDDCEKPKLLKSLENENIISAYGGYSHSIILTSNGKVFTFGSGSFGQLGNGSTTKI- 992
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD-------------R 265
TS + E +K + H+ + + GR+Y +G R
Sbjct: 993 -----TSPVPVYGLPE----PIKCIYTAYFHNLALSDVGRLYTWGSSPQVLRFHAQSQKR 1043
Query: 266 AVDKMLFQEGNHAR----------------RPSLI-----------------------SG 286
A ++++ EG+ A P+L+ +
Sbjct: 1044 ARNQLVLNEGDQADDAEIDALTADDGLLHLSPTLVDTSHISGDIFQMCCGCHHSAVISTT 1103
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPE-RVQGPFSE---------SPVDQVSCGWKHTAAI 336
G+LYTWG N +G LG+ I P + GP S S + +V CG T A+
Sbjct: 1104 GQLYTWGLNLDGQLGVSGIRERLVPTVTLVGPPSVIVDSSSTSGSLIKEVRCGADFTLAL 1163
Query: 337 SEGKILTWGWGGSH 350
L WGWG +H
Sbjct: 1164 DAANKL-WGWGSNH 1176
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 89/214 (41%), Gaps = 40/214 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG------ 96
+G+G +G+LG GS PV + +K + H L L++ G +Y G
Sbjct: 976 FGSGSFGQLGNGSTTKITSPVPVYGLPE-PIKCIYTAYFHNLALSDVGRLYTWGSSPQVL 1034
Query: 97 ---------------LNDFGQLGISENIGYS-------LEPLRI--SGLKKEVVQISTGY 132
LN+ Q +E + L P + S + ++ Q+ G
Sbjct: 1035 RFHAQSQKRARNQLVLNEGDQADDAEIDALTADDGLLHLSPTLVDTSHISGDIFQMCCGC 1094
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV---------ECLSGIFTKQAA 183
HHS+ I+ G+LY WG N +GQLG+ +++P T V SG K+
Sbjct: 1095 HHSAVISTTGQLYTWGLNLDGQLGVSGIRERLVPTVTLVGPPSVIVDSSSTSGSLIKEVR 1154
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + ++A+ K+ WG+ G+LG E +
Sbjct: 1155 CGADFTLALDAANKLWGWGSNHEGQLGKIPEEDL 1188
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 50/112 (44%), Gaps = 14/112 (12%)
Query: 289 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 347
+Y+WGSN G LG G P V S + VS G H+ AIS G++ TWGWG
Sbjct: 869 VYSWGSNHYGQLGTGRRGQAPYPMLVDS-LSNELIVSVSAGQYHSLAISASGQLWTWGWG 927
Query: 348 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
GQLGHG D P ++ EN + G++H+ L
Sbjct: 928 ------------VYGQLGHGAIDDCEKPKLLKSLENENIISAYGGYSHSIIL 967
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 14/118 (11%)
Query: 284 ISGGELYTWGSNENGCLGIGS-IDVLHSPERVQ-GPFSESPVDQVSCGWKHTAAISEGKI 341
I +LYTWG + GCLG+G + +P V + V QV+CG H+ A++ +
Sbjct: 810 IRNHKLYTWGHSSYGCLGVGPHMTKTATPNPVSWFVYIRVEVIQVACGRNHSIALTTNGV 869
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+ WG +H GQLG G +P +V+ N + VS G H+ A+
Sbjct: 870 --YSWGSNH----------YGQLGTGRRGQAPYPMLVDSLSNELIVSVSAGQYHSLAI 915
>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 4784
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 141/296 (47%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3018 WGEGEDGKLGHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3077
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA--ITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L+ VVQ++ G + +T +G ++ WG G+LG G
Sbjct: 3078 LGHGDNCT-QLKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRG- 3135
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ +P +VE L+G+ Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3136 -GSEGCSVPHQVERLNGVGVVQIECGAQFSLALTKIGEVWTWGKGDYYRLGHGTDQHV-- 3192
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P I+ L G KV A G LH + ++G+V
Sbjct: 3193 -------RKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQV-------------------- 3225
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
+ WG N++G G G+ V P V G V++V+CG H+ A
Sbjct: 3226 ----------FAWGDNDHGQQGSGNTVVNKKPNLVLG-LDGVFVNRVACGSSHSVA 3270
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 151/346 (43%), Gaps = 57/346 (16%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A +A GG TL+ +T G +YATG
Sbjct: 3949 WGHNHRGQLG-GLDGSRIKMPTPCEALSLLRPIQIA-GGEQTLYAVTPDGKLYATGYGAG 4006
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LGI S P + L+ +++ +++G H A++ DGE++ WG+ +G+LG
Sbjct: 4007 GRLGIGGTDSVS-TPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH 4065
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P +E LSGI A G S +T G VL+WG G GRLGHG
Sbjct: 4066 GNRDS--YDRPKLIEALSGIGVVDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQ 4123
Query: 218 LG----FLRST--------------------SEYTPRLIKELEGVKVKIAAAGFLHSACI 253
L LR+T +P I+ L G+ V G S +
Sbjct: 4124 LQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLGVIKVECGSQFSVAL 4183
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELYT 291
+G VY +G ++ +H RRP ++ GE++T
Sbjct: 4184 TRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVFT 4243
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
WG N+ G LG G++ + P VQ + +V CG HT A+S
Sbjct: 4244 WGDNDEGQLGDGTVTAIQRPRLVQS-LQGKHIVKVICGSAHTLALS 4288
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 181/388 (46%), Gaps = 59/388 (15%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-TETGCVYATGLN 98
+WG D +LG G S+ + P S + LK + GG+ +LF+ ++ G +YA G
Sbjct: 2911 VWGLNDKEQLG-GLKGSKVKLPTYSSVLSQ--LKPIHISGGSKSLFIVSQDGKLYACGEG 2967
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LG+ N P ++ L + VV+ + +G H+ A+T+DG+++ WG+ +G+L
Sbjct: 2968 TNGRLGLGHNNNVP-TPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3026
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + + P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 3027 GHGNRV--TLEKPKLLESLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD-- 3082
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGD--------- 264
+ ++ P+L+ L+G +V A G + C+ E G V+ +GD
Sbjct: 3083 -------NCTQLKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRG 3135
Query: 265 --------RAVDKM----LFQ-EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSP 311
V+++ + Q E +L GE++TWG + LG G+ + P
Sbjct: 3136 GSEGCSVPHQVERLNGVGVVQIECGAQFSLALTKIGEVWTWGKGDYYRLGHGTDQHVRKP 3195
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+QG V V+ G H A+++ G++ WG ++ H GQ G GN V
Sbjct: 3196 TPIQG-LRGKKVIHVAVGALHCLAVTDSGQVFAWG---------DNDH---GQQGSGNTV 3242
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + V +V+CG +H+ A
Sbjct: 3243 VNKKPNLVLGLDGVFVNRVACGSSHSVA 3270
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 145/332 (43%), Gaps = 72/332 (21%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTG 131
++ +AC +T +G +Y+ I + ++ P + GL+ V+QI+
Sbjct: 536 VRQVACTENSIYIVTTSGQLYS----------IHSSCAETVAPKLVEGLEGVSVIQIAAH 585
Query: 132 YH--HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQ 188
H+ A++ GE+Y WG G+LG G A+K +P +E ++ I+ G
Sbjct: 586 CEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKIALEKQVTAIYA-----GASY 640
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S AV+ G++ +WG G GRLGHG S ++ P ++ L+ KV A G
Sbjct: 641 SAAVSSVGELFTWGRGTYGRLGHGN---------SDDKFVPTQVQALKAYKVVDVALGS- 690
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVL 308
GD A ++ GG L+ WG + G LG GS +
Sbjct: 691 --------------GD-------------AHSMAVTDGGLLFAWGDGDFGKLGNGSCNGS 723
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
P +++G S V ++ G + + A+S +G + +WG GH GG+LGHG
Sbjct: 724 PLPVQIEG---VSSVARIYSGSQFSVALSYDGTLYSWG----------KGH--GGRLGHG 768
Query: 368 NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
N P +V+ E K + V+ G H AL
Sbjct: 769 NSEHSNVPKLVHALEGKKIVDVAVGSAHCLAL 800
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 85/162 (52%), Gaps = 6/162 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
WG G YGRLG G+ + ++ P A + + + AL G AH++ +T+ G ++A G DF
Sbjct: 653 WGRGTYGRLGHGNSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLFAWGDGDF 712
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG G L P++I G+ V +I +G S A++ DG LY WGK G+LG G
Sbjct: 713 GKLGNGSCNGSPL-PVQIEGVSS-VARIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGNS 770
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+P V L G A+G +A+T G++ WG
Sbjct: 771 EHS--NVPKLVHALEGKKIVDVAVGSAHCLALTSSGELYGWG 810
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 19/221 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ GRLG G S+ P A EK + A+ G +++ ++ G ++ G +G+
Sbjct: 603 WGAGEGGRLGHGDTASKEVPTKI-ALEKQ-VTAIYAGASYSAAVSSVGELFTWGRGTYGR 660
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG N P ++ LK +VV ++ +G HS A+T G L+ WG G+LG G
Sbjct: 661 LG-HGNSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLFAWGDGDFGKLGNGS 719
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P+P ++E +S + + G + SVA++ G + SWG G GRLGHG
Sbjct: 720 CNGS--PLPVQIEGVSSV--ARIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGN------ 769
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
S P+L+ LEG K+ A G H + +G +Y
Sbjct: 770 ---SEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGELY 807
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 114/247 (46%), Gaps = 41/247 (16%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
A C G H + L+ G VY+ G + G+LG + + P +I+ L+K+V I G +
Sbjct: 583 AAHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEV-PTKIA-LEKQVTAIYAGASY 640
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+A++ GEL+ WG+ + G+LG G K +PT+V+ L ALG S+AV
Sbjct: 641 SAAVSSVGELFTWGRGTYGRLGHGNSDDKF--VPTQVQALKAYKVVDVALGSGDAHSMAV 698
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSA 251
T GG + +WG G G+LG+G + +P L ++EGV V +G S
Sbjct: 699 TDGGLLFAWGDGDFGKLGNG-----------SCNGSP-LPVQIEGVSSVARIYSGSQFSV 746
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI----------------------SGGEL 289
+ +G +Y +G ++ H+ P L+ S GEL
Sbjct: 747 ALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGEL 806
Query: 290 YTWGSNE 296
Y WG N+
Sbjct: 807 YGWGRND 813
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 135/347 (38%), Gaps = 107/347 (30%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKV------------------------------- 164
S+ + ++ +WG N QLG G K +KV
Sbjct: 2901 SSNEISSKVLVWGLNDKEQLG-GLKGSKVKLPTYSSVLSQLKPIHISGGSKSLFIVSQDG 2959
Query: 165 --------------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWG 202
+P P +V L+ K+ A+ G + ++A+T GKV SWG
Sbjct: 2960 KLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWG 3019
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G G+LGHG R T E P+L++ L +++ A G HSA I +G +Y +
Sbjct: 3020 EGEDGKLGHGN--------RVTLE-KPKLLESLRTKRIRDIACGSSHSAAITSSGELYTW 3070
Query: 263 GDRAVDKMLFQEGNHARRPSLISG------------------------GELYTWGSNENG 298
G ++ + +P L++ G +++WG + G
Sbjct: 3071 GLGEYGRLGHGDNCTQLKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFG 3130
Query: 299 CLGIGSID---VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFS 354
LG G + V H ER+ G V Q+ CG + + A+++ G++ TWG G +
Sbjct: 3131 KLGRGGSEGCSVPHQVERLNG----VGVVQIECGAQFSLALTKIGEVWTWGKGDYY---- 3182
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+LGHG D PT + K + V+ G H A+ +
Sbjct: 3183 --------RLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTD 3221
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 104/233 (44%), Gaps = 53/233 (22%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++ WG N GQLG G ++ I +PT E LS + Q A G + AVT GK+ + G
Sbjct: 3946 IFGWGHNHRGQLG-GLDGSR-IKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGY 4003
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G GRLG G S+ TP L++ L+ V +K A C+
Sbjct: 4004 GAGGRLGIGGTDSV---------STPTLVESLQHVIIKKVAVNSGGKHCL---------- 4044
Query: 264 DRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 323
+L S GE+++WG E+G LG G+ D P+ ++ S V
Sbjct: 4045 ------------------ALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEA-LSGIGV 4085
Query: 324 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
++CG H+A I S+G +LTWG G G+LGHG+ D + P
Sbjct: 4086 VDIACGSAHSACITSQGHVLTWGKG------------RYGRLGHGDSEDQLQP 4126
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G GRLG G+ E P + A E + +A G AH L LT +G +Y G ND+ Q
Sbjct: 757 WGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGELYGWGRNDYQQ 816
Query: 103 LGISENIGYSLEPL 116
+ S G S +P+
Sbjct: 817 ICPS---GVSRDPI 827
Score = 37.7 bits (86), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 13/75 (17%)
Query: 326 VSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 384
V+ G KH A+S +G++ +WG G EDG +LGHGN Y P ++ +
Sbjct: 4036 VNSGGKHCLALSSDGEVFSWGEG-------EDG-----KLGHGNRDSYDRPKLIEALSGI 4083
Query: 385 KALQVSCGFNHTGAL 399
+ ++CG H+ +
Sbjct: 4084 GVVDIACGSAHSACI 4098
>gi|326674002|ref|XP_001334658.4| PREDICTED: RCC1 and BTB domain-containing protein 2 [Danio rerio]
Length = 527
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 132/303 (43%), Gaps = 49/303 (16%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG +S P + +L+ G G H + T G VYA G N + QLG +
Sbjct: 52 GCLGLGDTQSTIEPRRIDILCGKKIISLSYGTGPHVVIATADGEVYAWGHNGYSQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P +S + K V ++S G HH+ A+T DGE+Y WG N++GQ+G G A +
Sbjct: 111 TTNHGLTPALVSTNLIGKRVTEVSCGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQ-- 168
Query: 166 PIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
P P +V CL A G S+AV G+ WG +G+LG G
Sbjct: 169 PTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGETYGWGYNCNGQLGLGNNG--------- 219
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
++ TP I L+G+ + A G+ H+ + + G V
Sbjct: 220 NQQTPCRIAALQGINIIQVACGYAHTLALTDEGFV------------------------- 254
Query: 285 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKIL 342
Y+WG+N G LG G+ P + E V+ +C HT+A G++L
Sbjct: 255 -----YSWGANSYGQLGTGNKSNQAVPTLINMD-KERMVEVAACHTSHTSAAKTQSGQVL 308
Query: 343 TWG 345
WG
Sbjct: 309 MWG 311
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P +V + + ++CG HT+ LT G VYA G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNHGLTPALVSTNLIGKRVTEVSCGSHHTIALTTDGEVYAWGYNNSG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P R+S K VV I+ G S A+ +GE Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGETYGWGYNCNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P ++ L GI Q A G+ ++A+T G V SWGA G+LG G +S
Sbjct: 218 NGNQ--QTPCRIAALQGINIIQVACGYAHTLALTDEGFVYSWGANSYGQLGTGNKS---- 271
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ P LI + V++AA H SA ++G+V ++G
Sbjct: 272 -----NQAVPTLINMDKERMVEVAACHTSHTSAAKTQSGQVLMWG 311
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 134/315 (42%), Gaps = 52/315 (16%)
Query: 111 YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
++L P L ++ + + + +TV+ E++ G N +G LGLG + + P
Sbjct: 10 FALLPPEELRLIRQACVFGSAANEAIYVTVNDEVFALGTNCSGCLGLGDTQSTIEPRRID 69
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
+ C I + G V T G+V +WG G +LG+G + L TP
Sbjct: 70 ILCGKKIISLSYGTG-PHVVIATADGEVYAWGHNGYSQLGNGTTNHGL---------TPA 119
Query: 231 LIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS------- 282
L+ L G +V + G H+ + +G VY +G ++ G+ A +P+
Sbjct: 120 LVSTNLIGKRVTEVSCGSHHTIALTTDGEVYAWGYNNSGQV--GSGSTANQPTPRRVSSC 177
Query: 283 ------------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 324
++ GE Y WG N NG LG+G+ +P R+ +
Sbjct: 178 LQNKVVVNIACGQLCSMAVLDNGETYGWGYNCNGQLGLGNNGNQQTPCRI-AALQGINII 236
Query: 325 QVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 383
QV+CG+ HT A++ EG + +W G +S GQLG GN + PT++N +
Sbjct: 237 QVACGYAHTLALTDEGFVYSW------------GANSYGQLGTGNKSNQAVPTLINMDKE 284
Query: 384 VKALQVSCGFNHTGA 398
+C +HT A
Sbjct: 285 RMVEVAACHTSHTSA 299
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VY+ G N +GQ
Sbjct: 205 WGYNCNGQLGLGNNGNQQTPCRIAALQGINIIQVACGYAHTLALTDEGFVYSWGANSYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
LG ++ P I+ K+ +V+++ + H S+A T G++ MWG+
Sbjct: 265 LGTGNKSNQAV-PTLINMDKERMVEVAACHTSHTSAAKTQSGQVLMWGQ 312
>gi|432098306|gb|ELK28108.1| X-linked retinitis pigmentosa GTPase regulator, partial [Myotis
davidii]
Length = 1369
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 156/356 (43%), Gaps = 55/356 (15%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G D+G+LGLGS + +P A + +K +ACG HTL TE G VYA G N+ G
Sbjct: 52 MFGRNDWGQLGLGSKSAVCKPTCVKALKPEKVKHVACGRNHTLVSTEGGKVYAVGGNNEG 111
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + + + + + Q+S G + S+A+T DG+L+MWG+NS GQ+GL
Sbjct: 112 QLGLGDTEDRNTFHLIEFFTSQHQFKQLSAGSNTSAALTEDGKLFMWGENSEGQIGLNNV 171
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P V G + G+ S VT G++ ++G G+LG ++ +
Sbjct: 172 CNVYFPHEVTV----GKPIAWISCGYYHSAFVTMEGELYTFGEPEFGKLGLPKQLLM--- 224
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ P+L+ + +++A G G + ++AV
Sbjct: 225 ----NHKVPQLVPGIPEKVIQVACGG----------GHTVVLTEKAV------------- 257
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-G 339
Y +G + G LG+G+ + ++ + + +SCG HTA I++ G
Sbjct: 258 ---------YNFGLGQFGQLGLGTFVFETTEPKIMESVKDHKITYISCGENHTALITDIG 308
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
++ T+G DG LG N + PT+ K V+CG H
Sbjct: 309 RMYTFG----------DGRYGKLGLGMENFTNQFVPTLCPNFLRFKVHLVACGGCH 354
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 138/336 (41%), Gaps = 73/336 (21%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
LACG HT +T +Y G ND+GQLG+ +P + LK E V+ ++ G +H
Sbjct: 34 LACGDEHTAVITGNKKLYMFGRNDWGQLGLGSKSAV-CKPTCVKALKPEKVKHVACGRNH 92
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ T G++Y G N+ GQLGLG + L FT KQ + G S
Sbjct: 93 TLVSTEGGKVYAVGGNNEGQLGLGDTEDR------NTFHLIEFFTSQHQFKQLSAGSNTS 146
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T GK+ WG G++G ++ Y P + G + + G+ H
Sbjct: 147 AALTEDGKLFMWGENSEGQIGLNNVCNV---------YFPHEV--TVGKPIAWISCGYYH 195
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISGGELYTWGSNENGCLGIGSID 306
SA + G +Y FG+ K+ + NH + P L+ G
Sbjct: 196 SAFVTMEGELYTFGEPEFGKLGLPKQLLMNH-KVPQLVPG-------------------- 234
Query: 307 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGH 366
PE+V QV+CG HT ++E + +G G GQLG
Sbjct: 235 ---IPEKVI---------QVACGGGHTVVLTEKAVYNFGLG------------QFGQLGL 270
Query: 367 GNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G V + P I+ ++ K +SCG NHT + +
Sbjct: 271 GTFVFETTEPKIMESVKDHKITYISCGENHTALITD 306
>gi|198421655|ref|XP_002121487.1| PREDICTED: similar to hect domain and RLD 4 [Ciona intestinalis]
Length = 1029
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 108/223 (48%), Gaps = 10/223 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D +LG P + + + +ACG +H+LFL G +++ G N++GQ
Sbjct: 101 WGGNDKDQLGWTDGNCYPSPKKIKSLS-NKIVQVACGHSHSLFLGSNGALWSAGSNNYGQ 159
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L PL IS QIS G+ HS +T G ++ WG+N NGQLGLG
Sbjct: 160 LGFGDKSSTELRPL-ISLKGIPFSQISAGFWHSFCVTHSGAVFCWGRNDNGQLGLGDCVD 218
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P+ K L + K G + A+T G V ++G+ G+LGHG
Sbjct: 219 RNVPVLLK--ALRSLSVKYICAGELHTAALTLDGGVFTFGSNQFGQLGHGSSGP-----E 271
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSAC-IDENGRVYIFGD 264
TPR I EL G +V A G H+ C + + G VY FG+
Sbjct: 272 PLPVSTPRKIFELMGNEVTQIACGAQHTVCYVGKTGNVYTFGN 314
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 150/362 (41%), Gaps = 74/362 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+ + P + F K +K++ +FL E G V+ G +
Sbjct: 4 WGKSIIGK-SFGNGANLQVPTEINCFGKTIIKSVRVSRTIAVFLLEDGTVHTFGAEN--- 59
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+NIG+S ++S L+ +V I+ G H AI G++Y WG N QLG
Sbjct: 60 ----DNIGHSAGSTKVSALETVHIVDIALGDSHILAIDDKGKVYGWGGNDKDQLGWTD-- 113
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P P K++ LS Q A G S+ + G + S G+ G+LG G +SS
Sbjct: 114 GNCYPSPKKIKSLSNKIV-QVACGHSHSLFLGSNGALWSAGSNNYGQLGFGDKSS----- 167
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+E P + L+G+ +AGF HS C+ +G V
Sbjct: 168 ---TELRPLI--SLKGIPFSQISAGFWHSFCVTHSGAV---------------------- 200
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 340
+ WG N+NG LG+G + P ++ S S V + G HTAA++ +G
Sbjct: 201 --------FCWGRNDNGQLGLGDCVDRNVPVLLKALRSLS-VKYICAGELHTAALTLDGG 251
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFN 394
+ T+ G + GQLGHG+ P V+ + L Q++CG
Sbjct: 252 VFTF------------GSNQFGQLGHGSSGP--EPLPVSTPRKIFELMGNEVTQIACGAQ 297
Query: 395 HT 396
HT
Sbjct: 298 HT 299
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 10/178 (5%)
Query: 41 ALW--GNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
ALW G+ +YG+LG G S RP++ + + ++ G H+ +T +G V+ G
Sbjct: 148 ALWSAGSNNYGQLGFGDKSSTELRPLI--SLKGIPFSQISAGFWHSFCVTHSGAVFCWGR 205
Query: 98 NDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
ND GQLG+ + + ++ P+ + L+ V+ I G H++A+T+DG ++ +G N GQLG
Sbjct: 206 NDNGQLGLGDCVDRNV-PVLLKALRSLSVKYICAGELHTAALTLDGGVFTFGSNQFGQLG 264
Query: 157 LGKKAAKVIPI--PTKVECLSGIFTKQAALGFEQSVAVTGG-GKVLSWGAGGSGRLGH 211
G + +P+ P K+ L G Q A G + +V G G V ++G +LG+
Sbjct: 265 HGSSGPEPLPVSTPRKIFELMGNEVTQIACGAQHTVCYVGKTGNVYTFGNNNHSQLGY 322
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 108/278 (38%), Gaps = 54/278 (19%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WGK+ G+ G A + +PT++ C K + +V + G V ++GA
Sbjct: 1 MYAWGKSIIGK-SFGNGAN--LQVPTEINCFGKTIIKSVRVSRTIAVFLLEDGTVHTFGA 57
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+GH S+ + LE V + A G H ID+ G+VY +G
Sbjct: 58 ENDN-IGHSAGST--------------KVSALETVHIVDIALGDSHILAIDDKGKVYGWG 102
Query: 264 DRAVDKMLFQEGNHARRPSLI---------------------SGGELYTWGSNENGCLGI 302
D++ + +GN P I S G L++ GSN G LG
Sbjct: 103 GNDKDQLGWTDGNCYPSPKKIKSLSNKIVQVACGHSHSLFLGSNGALWSAGSNNYGQLGF 162
Query: 303 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 361
G D + R P Q+S G+ H+ ++ G + WG +
Sbjct: 163 G--DKSSTELRPLISLKGIPFSQISAGFWHSFCVTHSGAVFCWG------------RNDN 208
Query: 362 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
GQLG G+ VD P ++ ++ + G HT AL
Sbjct: 209 GQLGLGDCVDRNVPVLLKALRSLSVKYICAGELHTAAL 246
>gi|145593727|ref|YP_001158024.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303064|gb|ABP53646.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 567
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 128/315 (40%), Gaps = 45/315 (14%)
Query: 33 STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
ST F WG D G+LG GS P+ S ++ A+A G H+L LT G V
Sbjct: 50 STAVSEFLLAWGKNDNGQLGNGSTTGSNVPIAVSLPLGTTVTAVAAGRFHSLALTSAGTV 109
Query: 93 YATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
A G N FGQLG I S P+ +S V ++ G HS A+T G + WG N
Sbjct: 110 LAWGTNHFGQLGDGTLIDRS-APVEVSLPPGTTVTAVAAGGVHSMALTSVGTVLAWGGNG 168
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
GQLG G + P+ + SG+ A S+AVT G L+WG G+G+LG
Sbjct: 169 VGQLGDGSTTRRTTPV--EAILPSGVTVTAVAAAESHSLAVTSAGAALAWGLNGTGQLGD 226
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G + + TP + G +V AAG LHS +
Sbjct: 227 GS---------TINRSTPVSVALPLGTEVTAIAAGRLHSLAV------------------ 259
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 331
S G WG N G LG G+ +P V P V V G
Sbjct: 260 ------------TSVGAALAWGYNGTGQLGDGTTINRSTPVSVALPLGAE-VTAVVAGRL 306
Query: 332 HTAAISE-GKILTWG 345
H+AA++ G L WG
Sbjct: 307 HSAALTTAGTALAWG 321
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 109/292 (37%), Gaps = 51/292 (17%)
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
H + V L WGKN NGQLG G +PI V G A G S+A+
Sbjct: 46 HKPGSTAVSEFLLAWGKNDNGQLGNGSTTGSNVPI--AVSLPLGTTVTAVAAGRFHSLAL 103
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G VL+WG G+LG G P + G V AAG +HS
Sbjct: 104 TSAGTVLAWGTNHFGQLGDGTL---------IDRSAPVEVSLPPGTTVTAVAAGGVHSMA 154
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARR--------PS----------------LISGGE 288
+ G V +G V ++ +G+ RR PS + S G
Sbjct: 155 LTSVGTVLAWGGNGVGQL--GDGSTTRRTTPVEAILPSGVTVTAVAAAESHSLAVTSAGA 212
Query: 289 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 347
WG N G LG GS +P V P V ++ G H+ A+ S G L WG+
Sbjct: 213 ALAWGLNGTGQLGDGSTINRSTPVSVALPLGTE-VTAIAAGRLHSLAVTSVGAALAWGYN 271
Query: 348 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G+ GQLG G ++ P V + V G H+ AL
Sbjct: 272 GT------------GQLGDGTTINRSTPVSVALPLGAEVTAVVAGRLHSAAL 311
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS +R PV + + A+A G H+L +T G A G N GQ
Sbjct: 216 WGLNGTGQLGDGSTINRSTPVSVALPLGTEVTAIAAGRLHSLAVTSVGAALAWGYNGTGQ 275
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG I S P+ ++ L EV + G HS+A+T G WG N GQLG G +
Sbjct: 276 LGDGTTINRS-TPVSVALPLGAEVTAVVAGRLHSAALTTAGTALAWGDNGFGQLGNGGGS 334
Query: 162 ----AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
A + +PT L+ I ++ + + ++A+ G G L+WG+ G+LG G
Sbjct: 335 NSSEAVEVSLPTG-TTLAAIASRDS----DHTIAIAGDGTALAWGSNIFGQLGDGT---- 385
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
+T+ TP + G+ + AAG H+ +
Sbjct: 386 -----TTNPSTPVPVALPTGITLLTTAAGSDHTLAL 416
>gi|295789059|ref|NP_001171423.1| X-linked retinitis pigmentosa GTPase regulator isoform 4 [Mus
musculus]
gi|74223915|dbj|BAE23845.1| unnamed protein product [Mus musculus]
Length = 651
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 158/356 (44%), Gaps = 55/356 (15%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL T+TG VYA G N+ G
Sbjct: 1 MFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEG 60
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + + + + Q+S G + S+A+T DG+L+MWG NS GQ+GL K
Sbjct: 61 QLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDK 120
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ IP E G + G+ S VT G++ ++G +G+LG E +L
Sbjct: 121 SNVCIP----HEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNE--LLMN 174
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
RS P+ + + +++A G G + ++ V
Sbjct: 175 HRS-----PQRVLGIPERVIQVACGG----------GHTVVLTEKVV------------- 206
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-G 339
Y +G + G LG+G+ S ++ + + +SCG HTA ++E G
Sbjct: 207 ---------YAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELG 257
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
+ T+G G HG LG N + PT+ + ++CG H
Sbjct: 258 LLYTFG-DGRHGKLG---------LGMENFTNQFFPTLCSNFLRFAVQLIACGGCH 303
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 130/279 (46%), Gaps = 47/279 (16%)
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
M+G N+ GQLGLG KAA I PT ++ L K AA G ++ T G V + G
Sbjct: 1 MFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNN 58
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LG G F + +TP +K +AG SA + E+G+++++GD
Sbjct: 59 EGQLGLGDTDDRDTFHQIVF-FTP-------ADTIKQLSAGANTSAALTEDGKLFMWGDN 110
Query: 266 AVDKMLFQEGNHARRPSLIS--------------------GGELYTWGSNENGCLGIGSI 305
+ ++ ++ ++ P ++ GELYT+G ENG LG+ +
Sbjct: 111 SEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNE 170
Query: 306 DVLH--SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+++ SP+RV G E V QV+CG HT ++E + +G G GQ
Sbjct: 171 LLMNHRSPQRVLG-IPER-VIQVACGGGHTVVLTEKVVYAFGLG------------QFGQ 216
Query: 364 LGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
LG G + + P I+ ++ K +SCG NHT + E
Sbjct: 217 LGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 255
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 97/229 (42%), Gaps = 51/229 (22%)
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
+G+ G+LG G +++I+ P IK L+ KVK+AA G H+ + G VY
Sbjct: 2 FGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAACGRNHTLVSTDTGGVY 52
Query: 261 IFG-------------DRAV--DKMLFQEGNHARRPS--------LISGGELYTWGSNEN 297
G DR + F + ++ S L G+L+ WG N
Sbjct: 53 AAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSE 112
Query: 298 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSED 356
G +G+ + P V P+ +SCG+ H+A ++ +G++ T+G
Sbjct: 113 GQIGLEDKSNVCIPHEVT---VGKPISWISCGYYHSAFVTMDGELYTFG----------- 158
Query: 357 GHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHTGALLEYV 403
G+LG N++ H P V G + +QV+CG HT L E V
Sbjct: 159 -EPENGKLGLPNELLMNHRSPQRV-LGIPERVIQVACGGGHTVVLTEKV 205
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 24 LGICKRWI--------SSTLQRRFAALWGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLK 74
LGI +R I + L + +G G +G+LGLG+ L P + + +
Sbjct: 182 LGIPERVIQVACGGGHTVVLTEKVVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKIC 241
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQI 128
++CG HT +TE G +Y G G+LG+ EN P S + VQ+
Sbjct: 242 HISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQL 296
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 262 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 307
>gi|405354387|ref|ZP_11023754.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
gi|397092349|gb|EJJ23118.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
436)]
Length = 837
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 179/427 (41%), Gaps = 93/427 (21%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG D+G+LG G + S +PV ++KA+A G T+ + E G V+A G N +G
Sbjct: 408 VWGTDDFGQLGNGGVPSDAKPVQAQGL--MAVKAVAAGNDWTVAIGEDGSVWAWGSNYYG 465
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG S P+R++GL E +S G H+ + DG L WG + LG G
Sbjct: 466 QLGDGSRRSRS-TPVRLAGLT-EGKTVSVGSWHAVLLRQDGSLRTWGSGYSDVLGDGTTY 523
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG--QESSI-- 217
+K P + LSG+ K A +E SVAV G G V SWG +LG G + SS+
Sbjct: 524 SK-DAAPVQAPELSGV--KAVAAAYEHSVAVRGDGTVWSWGLNQDDQLGDGTFRPSSVPV 580
Query: 218 --LGFLRSTS---------EYT----------------------PRLIKELEG------- 237
LG +T+ +T P +G
Sbjct: 581 QVLGITGATAVAAGGDTLLAFTVALREDGTVWSWGNNYFGMLGHPAWPSTTQGAVQVPGL 640
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI------------- 284
+ V AAG LH+ + +NG V+ +G + ++ +G + +R S +
Sbjct: 641 MDVTAIAAGNLHAVALRKNGSVWSWGRNSAGQL--GDGTNIQRDSPVPLRELANVKAITA 698
Query: 285 ---------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
G ++ WG+N++G LG G+ P++VQG VD G HT A
Sbjct: 699 GRDFAVALHDDGTVWAWGANDSGQLGDGTFATRPLPQQVQGLTGVVAVD---AGDDHTLA 755
Query: 336 I-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
+ ++G + W G++ GQLG G PT V K V+ GF
Sbjct: 756 LRNDGTVWAW------------GNNDLGQLGDGTRT--TQPTPVQMQGFRKVSAVAAGFI 801
Query: 395 HTGALLE 401
+ LLE
Sbjct: 802 SSVVLLE 808
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 161/390 (41%), Gaps = 73/390 (18%)
Query: 37 RRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
R +WG G LG GS + W + + KAL+ G HT+ L G V+ G
Sbjct: 353 RTDGTVWGWGRANLLG-GSTQD-WLTMPVQVPDLADCKALSAGDEHTVALRADGTVWVWG 410
Query: 97 LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+DFGQLG + + +P++ GL V ++ G + AI DG ++ WG N GQLG
Sbjct: 411 TDDFGQLG-NGGVPSDAKPVQAQGLMA-VKAVAAGNDWTVAIGEDGSVWAWGSNYYGQLG 468
Query: 157 LGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G + ++ P+ L+G+ K ++G +V + G + +WG+G S LG G
Sbjct: 469 DGSRRSRSTPV-----RLAGLTEGKTVSVGSWHAVLLRQDGSLRTWGSGYSDVLGDGTTY 523
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P EL GVK AA + HS + +G V+ +G D++ G
Sbjct: 524 S--------KDAAPVQAPELSGVKA--VAAAYEHSVAVRGDGTVWSWGLNQDDQL----G 569
Query: 276 NHARRPS----------------------------LISGGELYTWGSNENGCLGIGSIDV 307
+ RPS L G +++WG+N G LG +
Sbjct: 570 DGTFRPSSVPVQVLGITGATAVAAGGDTLLAFTVALREDGTVWSWGNNYFGMLGHPAW-- 627
Query: 308 LHSPERVQGPFSES---PVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 363
P QG V ++ G H A+ + G + +W G +S GQ
Sbjct: 628 ---PSTTQGAVQVPGLMDVTAIAAGNLHAVALRKNGSVWSW------------GRNSAGQ 672
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGF 393
LG G ++ P + NVKA+ F
Sbjct: 673 LGDGTNIQRDSPVPLRELANVKAITAGRDF 702
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 143/346 (41%), Gaps = 53/346 (15%)
Query: 25 GICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
G+ + + T Q++ A WGN + +LG G + R + + A+ AH
Sbjct: 151 GVGRHALVVTEQQKVQA-WGNNESTQLGRGEPQYR------TVSGLTGVTAVKSRLAHVA 203
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
L E G ++ G N QLG + G + P+++ GL I+ G H+ A+ DG +
Sbjct: 204 ALKEDGSIWTWGSNAASQLGADISAGSRVTPMQVPGLTGATA-IAVGDSHTVALLKDGSV 262
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ WG N +GQLG + ++ IP +V L+ + A G ++VAV G V +WG
Sbjct: 263 WTWGDNRSGQLGDAGRESQ-NHIPAQVPGLASVVA--IAAGGSRTVAVRQDGTVWTWGTK 319
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG- 263
S R ++ P ++ V A A H + +G V+ +G
Sbjct: 320 QSNR----------------QDFNPTPVQVPGLTDVIAADASDNHVVVLRTDGTVWGWGR 363
Query: 264 -------------------DRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGS 304
D A K L H +L + G ++ WG+++ G LG G
Sbjct: 364 ANLLGGSTQDWLTMPVQVPDLADCKALSAGDEHTV--ALRADGTVWVWGTDDFGQLGNGG 421
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSH 350
+ P + QG + V V+ G T AI E + W WG ++
Sbjct: 422 VPSDAKPVQAQGLMA---VKAVAAGNDWTVAIGEDGSV-WAWGSNY 463
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 140/318 (44%), Gaps = 57/318 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG----AHTLFLTETGCVYATGLN 98
WG +LG G+ PV + A+A GG A T+ L E G V++ G N
Sbjct: 560 WGLNQDDQLGDGTFRPSSVPVQVLGITGAT--AVAAGGDTLLAFTVALREDGTVWSWGNN 617
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
FG LG + +++ GL +V I+ G H+ A+ +G ++ WG+NS GQLG G
Sbjct: 618 YFGMLGHPAWPSTTQGAVQVPGLM-DVTAIAAGNLHAVALRKNGSVWSWGRNSAGQLGDG 676
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P+P + L+ + K G + +VA+ G V +WGA SG+LG G +
Sbjct: 677 TNIQRDSPVPLR--ELANV--KAITAGRDFAVALHDDGTVWAWGANDSGQLGDGTFA--- 729
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ P+ ++ L GV AG H+ + +G V
Sbjct: 730 ------TRPLPQQVQGLTGVVA--VDAGDDHTLALRNDGTV------------------- 762
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
+ WG+N+ G LG G+ +P ++QG F + V V+ G+ + + E
Sbjct: 763 -----------WAWGNNDLGQLGDGTRTTQPTPVQMQG-FRK--VSAVAAGFISSVVLLE 808
Query: 339 GKILTWGWGGSHGTFSED 356
+ WGW G++GT D
Sbjct: 809 NGTV-WGW-GAYGTSGVD 824
>gi|392343043|ref|XP_003754780.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
norvegicus]
Length = 1035
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 175/393 (44%), Gaps = 73/393 (18%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K D+ + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDVPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE--------NIGYSLEPLRISGL 121
+K ACG HTL T+TG VYA G N+ GQLG+ + IG+ P I
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGF-FTPSDI--- 179
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+ Q+S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G
Sbjct: 180 ---IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIP----HEVTVGKPISW 232
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
+ G+ S VT G++ ++G +G+LG + I + +P+ + + ++
Sbjct: 233 ISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLI-------NHRSPQRVLGIPDKVIQ 285
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLG 301
+A G G + ++ V Y +G + G LG
Sbjct: 286 VACGG----------GHTVVLTEKVV----------------------YAFGLGQFGQLG 313
Query: 302 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSS 360
+G+ S ++ + + +SCG HTA +++ G + T+G G HG
Sbjct: 314 LGTFLFETSEPKIIDRIKDQKISHISCGENHTALMTDIGLMYTFG-DGRHGKLG------ 366
Query: 361 GGQLGHGNDVDYIHPTIV-NFGENVKALQVSCG 392
LG N + PT+ NF + L ++CG
Sbjct: 367 ---LGMENFTNQFFPTLCSNFLKFTVQL-IACG 395
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 170/379 (44%), Gaps = 61/379 (16%)
Query: 50 RLGLGSLESRWRP--VVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDFGQLGI 105
R G G L RP V + F K + A G + +TG V+ FG+
Sbjct: 6 RWGTGGLGQYLRPNRVAPAVFPKQAQIPFAAFGMAEPESLVPDTGAVFT-----FGKTKF 60
Query: 106 SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ENI P + + +S G H++ +T + +LYM+G N+ GQLGLG K+A I
Sbjct: 61 AENI-----PSKFWFKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSA--I 113
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
PT ++ L K AA G ++ T G V + G G+LG G F
Sbjct: 114 SKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTF-HQIG 172
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--- 282
+TP I +K +AG SA + E+G+++++GD + ++ + ++ P
Sbjct: 173 FFTPSDI-------IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVT 225
Query: 283 -----------------LISGGELYTWGSNENGCLGIGSIDVLH--SPERVQGPFSESPV 323
+ + GELYT+G ENG LG+ + +++ SP+RV G V
Sbjct: 226 VGKPISWISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINHRSPQRVLG--IPDKV 283
Query: 324 DQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGE 382
QV+CG HT ++E + +G G GQLG G + + P I++ +
Sbjct: 284 IQVACGGGHTVVLTEKVVYAFGLG------------QFGQLGLGTFLFETSEPKIIDRIK 331
Query: 383 NVKALQVSCGFNHTGALLE 401
+ K +SCG NHT + +
Sbjct: 332 DQKISHISCGENHTALMTD 350
>gi|403366107|gb|EJY82845.1| RCC1 repeat domain protein [Oxytricha trifallax]
Length = 2141
Score = 105 bits (261), Expect = 5e-20, Method: Composition-based stats.
Identities = 74/238 (31%), Positives = 121/238 (50%), Gaps = 17/238 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKH-----SLKALACGGAHTLFLTETGCVYATGL 97
WG G+ G LG G P + ++K+ ++K +ACG H L L G VY+ G
Sbjct: 276 WGLGNSGGLGQGEQNVSMTPNIIK-YQKNGHLFQNIKDIACGSNHVLSLDHQGIVYSWGN 334
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG + G ++ P I GL++ +++ I G S+AI++ EL++WG +G+LG
Sbjct: 335 GQGGRLGHGDETGENI-PKEIIGLRQYKILMIEAGEGSSAAISIKNELFIWGVGLHGRLG 393
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
GK A + P+ +E L + ALG S+ + GK + WG+ G+L G E++
Sbjct: 394 TGKTANVLKPV--MLEDLKDQKVEDIALGSNHSLCILRNGKAMCWGSSKDGKL--GLETA 449
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ + P+ + L+ K+ AAG HS + ENG +Y FG+ K+ + E
Sbjct: 450 L-----DRNFTQPKELVTLDKEKLYQIAAGPFHSIALTENGEIYSFGNSKDGKLGYDE 502
Score = 90.9 bits (224), Expect = 1e-15, Method: Composition-based stats.
Identities = 78/259 (30%), Positives = 118/259 (45%), Gaps = 49/259 (18%)
Query: 115 PLRI--SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
PL I ++ ++ +STGY H A+T +G + WG+N NGQLG+G+K V+ PT+++
Sbjct: 665 PLTIYHDAVQMKIKHVSTGYFHVLAVTHEGATFGWGRNDNGQLGMGRKDT-VVSKPTRIK 723
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG------------- 219
L A G S+ ++ G+VL G G LG G S+ G
Sbjct: 724 SLQDKVIIMTASGESHSLFLSDLGEVLCSGFNEFGELGIGLNSTSGGADKKENPDEIYDE 783
Query: 220 -----FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ + E TP++IK LE + AAG HS I R Y ++A+
Sbjct: 784 NYQRQLIETKIELTPKIIKGLE--SIGFIAAGKNHSIAI----RTYKRKEKAM------- 830
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHT 333
+L+TWG +G G GS + P+ V+ P ++ Q SCG KHT
Sbjct: 831 -------------KLFTWGCGWHGQTGHGSWQNDYLPQIVKVPVLKDTKFIQASCGSKHT 877
Query: 334 AAI-SEGKILTWGWGGSHG 351
A+ + G I +G+ S G
Sbjct: 878 IALDTTGHIWFFGYKPSVG 896
Score = 84.0 bits (206), Expect = 1e-13, Method: Composition-based stats.
Identities = 80/305 (26%), Positives = 135/305 (44%), Gaps = 54/305 (17%)
Query: 43 WGNGDYGRLGLG-------SLESR------WRPVVCSAFEKHSLKALACGGAHTLFLTET 89
WG + GRLG+ ++E + ++P + + ++CG + TL L++
Sbjct: 211 WGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCGNSFTLALSQE 270
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHHSSAITVDGEL 144
G VY+ GL + G LG E S+ P I K + + I+ G +H ++ G +
Sbjct: 271 GHVYSWGLGNSGGLGQGEQ-NVSMTPNIIKYQKNGHLFQNIKDIACGSNHVLSLDHQGIV 329
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
Y WG G+LG G + + IP I +A G S A++ ++ WG G
Sbjct: 330 YSWGNGQGGRLGHGDETGENIPKEIIGLRQYKILMIEAGEG--SSAAISIKNELFIWGVG 387
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG- 263
GRLG G+ +++L P ++++L+ KV+ A G HS CI NG+ +G
Sbjct: 388 LHGRLGTGKTANVL---------KPVMLEDLKDQKVEDIALGSNHSLCILRNGKAMCWGS 438
Query: 264 --------DRAVDKMLFQEGNH-----------ARRP----SLISGGELYTWGSNENGCL 300
+ A+D+ Q A P +L GE+Y++G++++G L
Sbjct: 439 SKDGKLGLETALDRNFTQPKELVTLDKEKLYQIAAGPFHSIALTENGEIYSFGNSKDGKL 498
Query: 301 GIGSI 305
G I
Sbjct: 499 GYDEI 503
Score = 77.0 bits (188), Expect = 2e-11, Method: Composition-based stats.
Identities = 88/356 (24%), Positives = 148/356 (41%), Gaps = 84/356 (23%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTG 131
+K ++ G H L +T G + G ND GQLG+ +P RI L+ K ++ ++G
Sbjct: 677 IKHVSTGYFHVLAVTHEGATFGWGRNDNGQLGMGRKDTVVSKPTRIKSLQDKVIIMTASG 736
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAA------KVIP------------IPTKVEC 173
HS ++ GE+ G N G+LG+G + K P I TK+E
Sbjct: 737 ESHSLFLSDLGEVLCSGFNEFGELGIGLNSTSGGADKKENPDEIYDENYQRQLIETKIEL 796
Query: 174 LSGIFTKQAALGF-----EQSVAV------TGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
I ++GF S+A+ K+ +WG G G+ GHG
Sbjct: 797 TPKIIKGLESIGFIAAGKNHSIAIRTYKRKEKAMKLFTWGCGWHGQTGHGSWQ------- 849
Query: 223 STSEYTPRLIK--ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
++Y P+++K L+ K A+ G H+ +D G ++ FG +
Sbjct: 850 --NDYLPQIVKVPVLKDTKFIQASCGSKHTIALDTTGHIWFFG---------------YK 892
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
PS+ G E + ++E + L +P ++Q PF +S G +H A+++
Sbjct: 893 PSV--GIEDF---NDEKQFMPAR----LETPSKIQEPFK-----FISSGEEHNLAVTQSG 938
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
L +G+G + T H +Y++ V E KA+ +CG NH+
Sbjct: 939 -LVYGFGKNTNTKINSSHK-----------EYLYFDQVENEE--KAVLTACGANHS 980
Score = 73.2 bits (178), Expect = 2e-10, Method: Composition-based stats.
Identities = 85/383 (22%), Positives = 151/383 (39%), Gaps = 89/383 (23%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G +GRLG G + +PV+ + ++ +A G H+L + G G + G
Sbjct: 383 IWGVGLHGRLGTGKTANVLKPVMLEDLKDQKVEDIALGSNHSLCILRNGKAMCWGSSKDG 442
Query: 102 QLGISENIGYSL-EPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG+ + + +P + L KE + QI+ G HS A+T +GE+Y +G + +G+LG +
Sbjct: 443 KLGLETALDRNFTQPKELVTLDKEKLYQIAAGPFHSIALTENGEIYSFGNSKDGKLGYDE 502
Query: 160 KAAKVIPIPTKV-----------------------------------ECLSGIFTKQAAL 184
V IP K+ + L G QA
Sbjct: 503 IKGNV-QIPRKITNCPIFARKTGLNDRRDKYQLFNQFDDQMTVISNNQQLGGCEVIQAQC 561
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLG---------------------HGQESSILG---- 219
GF +V + G++ G+ G+LG G + + G
Sbjct: 562 GFNSTVFLLNDGQMYVCGSNKYGQLGFSKRAGGKDKDGNKMLINSNNDGNQGGMSGANDN 621
Query: 220 ------------FLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
FL+ S+ P+L K+L A +++ + I+ D
Sbjct: 622 DNDDDDNGIGGGFLQQNSDDVLPPQLKKKL---------AELQQLQDVEKPSPLTIYHDA 672
Query: 266 AVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSID-VLHSPERVQGPFSESPVD 324
K+ + ++ G + WG N+NG LG+G D V+ P R++ + +
Sbjct: 673 VQMKIKHVSTGYFHVLAVTHEGATFGWGRNDNGQLGMGRKDTVVSKPTRIKS-LQDKVII 731
Query: 325 QVSCGWKHTAAISE-GKILTWGW 346
+ G H+ +S+ G++L G+
Sbjct: 732 MTASGESHSLFLSDLGEVLCSGF 754
Score = 72.0 bits (175), Expect = 5e-10, Method: Composition-based stats.
Identities = 79/312 (25%), Positives = 125/312 (40%), Gaps = 60/312 (19%)
Query: 43 WGNGDYGRLGLGSLESR-WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG D G+LG+G ++ +P + + + A G +H+LFL++ G V +G N+FG
Sbjct: 699 WGRNDNGQLGMGRKDTVVSKPTRIKSLQDKVIIMTASGESHSLFLSDLGEVLCSGFNEFG 758
Query: 102 QLGISEN--------------------------IGYSLEPLRISGLKKEVVQISTGYHHS 135
+LGI N L P I GL + + I+ G +HS
Sbjct: 759 ELGIGLNSTSGGADKKENPDEIYDENYQRQLIETKIELTPKIIKGL-ESIGFIAAGKNHS 817
Query: 136 SAITV------DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
AI +L+ WG +GQ G G +P KV L QA+ G + +
Sbjct: 818 IAIRTYKRKEKAMKLFTWGCGWHGQTGHGSWQNDYLPQIVKVPVLKDTKFIQASCGSKHT 877
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A+ G + W G +G + F+ + E TP I+E K ++G H
Sbjct: 878 IALDTTGHI--WFFGYKPSVGIEDFNDEKQFMPARLE-TPSKIQE----PFKFISSGEEH 930
Query: 250 SACIDENGRVYIFGDRAVDK--------MLFQEGNHARRPSLISGGE-----------LY 290
+ + ++G VY FG K + F + + + L + G Y
Sbjct: 931 NLAVTQSGLVYGFGKNTNTKINSSHKEYLYFDQVENEEKAVLTACGANHSVLIDTKGVPY 990
Query: 291 TWGSNENGCLGI 302
TWG NG G+
Sbjct: 991 TWGFVGNGRCGL 1002
Score = 64.3 bits (155), Expect = 1e-07, Method: Composition-based stats.
Identities = 72/301 (23%), Positives = 122/301 (40%), Gaps = 62/301 (20%)
Query: 141 DGELYMWGKNSNGQLGLG----------KKAAKVIPI-PTKVECLSGIFTKQAALGFEQS 189
+G ++ WG + G+LG+ +K ++IP P+ V+ + I + + G +
Sbjct: 205 NGIVFTWGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCGNSFT 264
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG----VKVKIAAA 245
+A++ G V SWG G SG LG G+++ + TP +IK + +K A
Sbjct: 265 LALSQEGHVYSWGLGNSGGLGQGEQNVSM---------TPNIIKYQKNGHLFQNIKDIAC 315
Query: 246 GFLHSACIDENGRVYIF----------GDRAVD------------KMLFQEGNHARRPSL 283
G H +D G VY + GD + K+L E ++
Sbjct: 316 GSNHVLSLDHQGIVYSWGNGQGGRLGHGDETGENIPKEIIGLRQYKILMIEAGEGSSAAI 375
Query: 284 ISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 342
EL+ WG +G LG G + P ++ + V+ ++ G H+ I GK +
Sbjct: 376 SIKNELFIWGVGLHGRLGTGKTANVLKPVMLED-LKDQKVEDIALGSNHSLCILRNGKAM 434
Query: 343 TWGWGGSHGTFSEDGHSSGGQLGHGNDVD--YIHPTIVNFGENVKALQVSCGFNHTGALL 400
W G S G+LG +D + P + + K Q++ G H+ AL
Sbjct: 435 CW------------GSSKDGKLGLETALDRNFTQPKELVTLDKEKLYQIAAGPFHSIALT 482
Query: 401 E 401
E
Sbjct: 483 E 483
Score = 61.2 bits (147), Expect = 9e-07, Method: Composition-based stats.
Identities = 51/185 (27%), Positives = 77/185 (41%), Gaps = 44/185 (23%)
Query: 16 QDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESR--WRPVVCSAFEKHSL 73
+DI LGS +C L+ A WG+ G+LGL + R +P +K L
Sbjct: 415 EDIALGSNHSLC------ILRNGKAMCWGSSKDGKLGLETALDRNFTQPKELVTLDKEKL 468
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI---------SGLKK- 123
+A G H++ LTE G +Y+ G + G+LG E G P +I +GL
Sbjct: 469 YQIAAGPFHSIALTENGEIYSFGNSKDGKLGYDEIKGNVQIPRKITNCPIFARKTGLNDR 528
Query: 124 --------------------------EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
EV+Q G++ + + DG++Y+ G N GQLG
Sbjct: 529 RDKYQLFNQFDDQMTVISNNQQLGGCEVIQAQCGFNSTVFLLNDGQMYVCGSNKYGQLGF 588
Query: 158 GKKAA 162
K+A
Sbjct: 589 SKRAG 593
Score = 58.2 bits (139), Expect = 8e-06, Method: Composition-based stats.
Identities = 63/236 (26%), Positives = 101/236 (42%), Gaps = 40/236 (16%)
Query: 34 TLQRRFAAL----WGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLT 87
T +R+ A+ WG G +G+ G GS ++ + P V + +CG HT+ L
Sbjct: 822 TYKRKEKAMKLFTWGCGWHGQTGHGSWQNDYLPQIVKVPVLKDTKFIQASCGSKHTIALD 881
Query: 88 ETGCVY------ATGLNDFGQLGISENIGYSLEPLRI---SGLKKEVVQISTGYHHSSAI 138
TG ++ + G+ DF N P R+ S +++ IS+G H+ A+
Sbjct: 882 TTGHIWFFGYKPSVGIEDF-------NDEKQFMPARLETPSKIQEPFKFISSGEEHNLAV 934
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
T G +Y +GKN+N ++ K E + T A G SV + G
Sbjct: 935 TQSGLVYGFGKNTNTKINSSHKEYLYFDQVENEE--KAVLT---ACGANHSVLIDTKGVP 989
Query: 199 LSWGAGGSGRLG---------HGQES----SILGFLRSTSEYTPRLIKELEGVKVK 241
+WG G+GR G QES +++ F+++ + IKEL G K K
Sbjct: 990 YTWGFVGNGRCGLKLEKDDAQQEQESLSAPTVIYFMKTLFQKEIIKIKELLGDKYK 1045
Score = 45.4 bits (106), Expect = 0.053, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 93/238 (39%), Gaps = 44/238 (18%)
Query: 194 GGGKVLSWGAGGSGRLGHG-QESSILGFLRSTSE---YTPRLIKELEGVKVKIAAAGFLH 249
G G V +WG GRLG E I + +E + P ++K + + + G
Sbjct: 204 GNGIVFTWGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCGNSF 263
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS------------------------ 285
+ + + G VY +G + E N + P++I
Sbjct: 264 TLALSQEGHVYSWGLGNSGGLGQGEQNVSMTPNIIKYQKNGHLFQNIKDIACGSNHVLSL 323
Query: 286 --GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKIL 342
G +Y+WG+ + G LG G + P+ + G + + + G +AAIS + ++
Sbjct: 324 DHQGIVYSWGNGQGGRLGHGDETGENIPKEIIG-LRQYKILMIEAGEGSSAAISIKNELF 382
Query: 343 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
WG G G+LG G + + P ++ ++ K ++ G NH+ +L
Sbjct: 383 IWGVG------------LHGRLGTGKTANVLKPVMLEDLKDQKVEDIALGSNHSLCIL 428
>gi|326436402|gb|EGD81972.1| hypothetical protein PTSG_02656 [Salpingoeca sp. ATCC 50818]
Length = 5125
Score = 105 bits (261), Expect = 5e-20, Method: Composition-based stats.
Identities = 60/169 (35%), Positives = 92/169 (54%), Gaps = 4/169 (2%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG +GRLGLG R+ P + ++ +ACG HTL LT+ G VY+ G D G
Sbjct: 3219 MWGCNHHGRLGLGDQNDRYEPTLVPNLP--PVQMVACGDRHTLVLTQRGGVYSFGCGDQG 3276
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LGI E L P ++ + + ++ G + S+A+T G+LY+WG + +LG G
Sbjct: 3277 RLGIPEAPHKLLRPAKLDFGRARMTRVICGCNSSAALTDTGQLYVWGTGRSYRLGTGSMT 3336
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+ ++PI +V L+ A+LG E VAV+ G V WG+ S +LG
Sbjct: 3337 SHMLPI--RVTDLASHKIVDASLGHEHGVAVSETGDVFVWGSNDSSQLG 3383
Score = 92.0 bits (227), Expect = 5e-16, Method: Composition-based stats.
Identities = 95/320 (29%), Positives = 139/320 (43%), Gaps = 62/320 (19%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS-LEPLRISGLKKEVVQISTGYHH 134
+A GG HTL +TE + G G+LG+ + S L P + GL+ +V++++ G H
Sbjct: 3151 VAYGGYHTLVVTEDHRLLVCGTGKNGKLGLRDTRDQSSLVP--VPGLR-DVLRVACGRRH 3207
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S+A+T G+LYMWG N +G+LGLG + + PT V L + + A G ++ +T
Sbjct: 3208 SAAVTATGQLYMWGCNHHGRLGLGDQNDRY--EPTLVPNLPPV--QMVACGDRHTLVLTQ 3263
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G V S+G G GRLG + A L A +D
Sbjct: 3264 RGGVYSFGCGDQGRLG-----------------------------IPEAPHKLLRPAKLD 3294
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
FG + +++ + A +L G+LY WG+ + LG GS+ P RV
Sbjct: 3295 -------FGRARMTRVICGCNSSA---ALTDTGQLYVWGTGRSYRLGTGSMTSHMLPIRV 3344
Query: 315 QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGH-GNDVDY 372
S VD S G +H A+SE G + WG S D GG
Sbjct: 3345 TDLASHKIVD-ASLGHEHGVAVSETGDVFVWG--------SNDSSQLGGATADAAAPRPL 3395
Query: 373 IHPTIVNFGENVKALQVSCG 392
+HP + G N +VSCG
Sbjct: 3396 LHPELRGKGLN----RVSCG 3411
Score = 90.9 bits (224), Expect = 1e-15, Method: Composition-based stats.
Identities = 76/256 (29%), Positives = 113/256 (44%), Gaps = 49/256 (19%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
+SGL+ E H A+T GE+Y WG NS QLG +PTK+ G
Sbjct: 125 VSGLENERFVQVAAIDHVLALTTRGEVYSWGSNSYAQLGRNDDPI----VPTKITRGFGR 180
Query: 178 FT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
+ A+G + S AV+ G + +WG G GRLGHG + P+ + L+
Sbjct: 181 SSIVYVAVGGQHSAAVSEDGVLYTWGRGSYGRLGHGTSDDVA---------FPQPVLALK 231
Query: 237 GVKVKIAAA----GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW 292
+ IA G H+ + +G +Y FGD G++ P+ +GG
Sbjct: 232 SKDILIATVACGIGDAHTLALSRDGVIYAFGD----------GDYGWGPAPATGG----- 276
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKIL-TWGWGGSHG 351
+G LG+GS + P + F + V QV CG + +A ++EG L TW
Sbjct: 277 ---ASGKLGLGSTERTRVPVAIPCDFDGTKVKQVWCGRQISACLTEGGALYTW------- 326
Query: 352 TFSEDGHSSGGQLGHG 367
G++SGG LG+G
Sbjct: 327 -----GNASGGALGNG 337
Score = 82.4 bits (202), Expect = 4e-13, Method: Composition-based stats.
Identities = 75/262 (28%), Positives = 110/262 (41%), Gaps = 45/262 (17%)
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GL-KKEVVQISTGYHHSSAIT 139
H L LT G VY+ G N + QLG +++ + P +I+ G + +V ++ G HS+A++
Sbjct: 141 HVLALTTRGEVYSWGSNSYAQLGRNDD---PIVPTKITRGFGRSSIVYVAVGGQHSAAVS 197
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGK 197
DG LY WG+ S G+LG G P P I A G ++A++ G
Sbjct: 198 EDGVLYTWGRGSYGRLGHGTSDDVAFPQPVLALKSKDILIATVACGIGDAHTLALSRDGV 257
Query: 198 VLSWGAGGSG---RLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACI 253
+ ++G G G G S LG + P I + +G KVK G SAC+
Sbjct: 258 IYAFGDGDYGWGPAPATGGASGKLGLGSTERTRVPVAIPCDFDGTKVKQVWCGRQISACL 317
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG-SIDVLHSPE 312
E GG LYTWG+ G LG G S + SP
Sbjct: 318 TE------------------------------GGALYTWGNASGGALGNGESYGAVESPA 347
Query: 313 RVQGPFSESPVDQVSCGWKHTA 334
R+ ++ + V+ G H A
Sbjct: 348 RI---LADHVIKSVTAGPSHIA 366
Score = 71.2 bits (173), Expect = 8e-10, Method: Composition-based stats.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 32/194 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCS----AFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
WG+ Y +LG P+V + F + S+ +A GG H+ ++E G +Y G
Sbjct: 154 WGSNSYAQLGRND-----DPIVPTKITRGFGRSSIVYVAVGGQHSAAVSEDGVLYTWGRG 208
Query: 99 DFGQL--GISENIGYSLEPLRISGLKKEVVQIST-----GYHHSSAITVDGELYMWGK-- 149
+G+L G S+++ + P + LK + + I+T G H+ A++ DG +Y +G
Sbjct: 209 SYGRLGHGTSDDVAF---PQPVLALKSKDILIATVACGIGDAHTLALSRDGVIYAFGDGD 265
Query: 150 ----------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
++G+LGLG +P+ + G KQ G + S +T GG +
Sbjct: 266 YGWGPAPATGGASGKLGLGSTERTRVPVAIPCD-FDGTKVKQVWCGRQISACLTEGGALY 324
Query: 200 SWGAGGSGRLGHGQ 213
+WG G LG+G+
Sbjct: 325 TWGNASGGALGNGE 338
Score = 58.5 bits (140), Expect = 6e-06, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 19/123 (15%)
Query: 282 SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GK 340
+L + GE+Y+WGSN LG ++ P ++ F S + V+ G +H+AA+SE G
Sbjct: 144 ALTTRGEVYSWGSNSYAQLGRNDDPIV--PTKITRGFGRSSIVYVAVGGQHSAAVSEDGV 201
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHG--NDVDYIHPTIVNFGENVKALQVSCGFN--HT 396
+ TWG G S G+LGHG +DV + P + +++ V+CG HT
Sbjct: 202 LYTWGRG------------SYGRLGHGTSDDVAFPQPVLALKSKDILIATVACGIGDAHT 249
Query: 397 GAL 399
AL
Sbjct: 250 LAL 252
Score = 41.6 bits (96), Expect = 0.74, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 13/89 (14%)
Query: 43 WGNGDYG------------RLGLGSLESRWRPVVCSA-FEKHSLKALACGGAHTLFLTET 89
+G+GDYG +LGLGS E PV F+ +K + CG + LTE
Sbjct: 261 FGDGDYGWGPAPATGGASGKLGLGSTERTRVPVAIPCDFDGTKVKQVWCGRQISACLTEG 320
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRI 118
G +Y G G LG E+ G P RI
Sbjct: 321 GALYTWGNASGGALGNGESYGAVESPARI 349
>gi|432889733|ref|XP_004075335.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Oryzias
latipes]
Length = 527
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 132/303 (43%), Gaps = 49/303 (16%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG L+S P + +L+ G G H + T G V+A G N + QLG +
Sbjct: 52 GCLGLGDLQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATADGEVFAWGHNGYSQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P +S L K V +++ G HH+ A+T DGE++ WG N++GQ+G G A +
Sbjct: 111 TTNHGLTPALVSTNLLGKRVTEVACGSHHTIALTADGEVFAWGYNNSGQVGSGSTANQ-- 168
Query: 166 PIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
P P +V CL G S+AV G++ WG +G+LG G
Sbjct: 169 PTPRRVSSCLQSKVVVNVGCGQLCSMAVLDNGEIYGWGYNCNGQLGLGNNG--------- 219
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
++ TP I L+GV V A G+ H+ + + G V
Sbjct: 220 NQQTPCRIAALQGVNVVQVACGYAHTLALTDEGFV------------------------- 254
Query: 285 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKIL 342
Y WG+N G LG G+ P + E V+ +C HT+A G++L
Sbjct: 255 -----YAWGANSYGQLGTGNKSNQALPTLINTD-KERMVEVAACHTSHTSAAKTQSGQVL 308
Query: 343 TWG 345
WG
Sbjct: 309 MWG 311
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P +V + + +ACG HT+ LT G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVTEVACGSHHTIALTADGEVFAWGYNNSG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P R+S K VV + G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRRVSSCLQSKVVVNVGCGQLCSMAVLDNGEIYGWGYNCNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P ++ L G+ Q A G+ ++A+T G V +WGA G+LG G +S
Sbjct: 218 NGNQ--QTPCRIAALQGVNVVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKS---- 271
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ P LI + V++AA H SA ++G+V ++G
Sbjct: 272 -----NQALPTLINTDKERMVEVAACHTSHTSAAKTQSGQVLMWG 311
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 134/315 (42%), Gaps = 52/315 (16%)
Query: 111 YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
++L P L ++ + + + +TV+ E++ G N +G LGLG + + P
Sbjct: 10 FALLPPEELRLIRQACVFGSAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRID 69
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
V C I + G V T G+V +WG G +LG+G + L TP
Sbjct: 70 VLCGKKIVSLSYGTG-PHVVIATADGEVFAWGHNGYSQLGNGTTNHGL---------TPA 119
Query: 231 LIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS------- 282
L+ L G +V A G H+ + +G V+ +G ++ G+ A +P+
Sbjct: 120 LVSTNLLGKRVTEVACGSHHTIALTADGEVFAWGYNNSGQV--GSGSTANQPTPRRVSSC 177
Query: 283 ------------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 324
++ GE+Y WG N NG LG+G+ +P R+ V
Sbjct: 178 LQSKVVVNVGCGQLCSMAVLDNGEIYGWGYNCNGQLGLGNNGNQQTPCRI-AALQGVNVV 236
Query: 325 QVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 383
QV+CG+ HT A++ EG + W G +S GQLG GN + PT++N +
Sbjct: 237 QVACGYAHTLALTDEGFVYAW------------GANSYGQLGTGNKSNQALPTLINTDKE 284
Query: 384 VKALQVSCGFNHTGA 398
+C +HT A
Sbjct: 285 RMVEVAACHTSHTSA 299
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +GQ
Sbjct: 205 WGYNCNGQLGLGNNGNQQTPCRIAALQGVNVVQVACGYAHTLALTDEGFVYAWGANSYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
LG +L P I+ K+ +V+++ + H S+A T G++ MWG+
Sbjct: 265 LGTGNKSNQAL-PTLINTDKERMVEVAACHTSHTSAAKTQSGQVLMWGQ 312
>gi|118353390|ref|XP_001009963.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89291730|gb|EAR89718.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 1166
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 119/233 (51%), Gaps = 18/233 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHS--LKALACGGAHTLFLTETGCVYATGLND 99
+WG+ YG+LGL S E + F S ++ +ACG HT F+ + G VY+ G N+
Sbjct: 38 VWGSDTYGQLGLASREF-GKSCPSPRFTSFSVVIEDIACGEEHTSFIAQNGYVYSMGNNN 96
Query: 100 FGQLGIS-ENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQLG+S + Y P + GLK + VQIS G +H++ + +G+L+ WG+N GQLG+
Sbjct: 97 QGQLGVSVDESYYKSAPTLVEGLKGYKAVQISCGAYHTATVCDNGQLFTWGQNCEGQLGI 156
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
GK P ++ +F + G ++ +T K+ +G G G+LG G E
Sbjct: 157 GKSDNMTTPQIVDLKNNLAVF---VSCGKRNTMVITQTQKIFGFGDGKCGQLGLGNE--- 210
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
+EY PR + +++ + + G H+ ++E G + G+ +++
Sbjct: 211 ------CNEYKPRQL-QIQMQNIVAISCGDRHTLFLNEEGEAFSCGNNTYNQL 256
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+G G+LGLG+ + ++P + ++ A++CG HTLFL E G ++ G N + Q
Sbjct: 197 FGDGKCGQLGLGNECNEYKPRQL-QIQMQNIVAISCGDRHTLFLNEEGEAFSCGNNTYNQ 255
Query: 103 LGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N S P+++ K V I+ S+A++ +G LY+WG GQ
Sbjct: 256 LGCANNSQSSNIPVKVKQKSTLKFVKVIAANTPMSAALSSEGYLYLWGTGFFGQFDR--- 312
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
PT+ E +G + + G GKV SWG+ G LG G
Sbjct: 313 -------PTRCEFAPKDLL-DICIGNQFICLLDGEGKVYSWGSNMFGELGQG 356
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 11/180 (6%)
Query: 86 LTETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
L + VY G + +GQLG+ S G S R + + I+ G H+S I +G +
Sbjct: 30 LKDFTPVYVWGSDTYGQLGLASREFGKSCPSPRFTSFSVVIEDIACGEEHTSFIAQNGYV 89
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
Y G N+ GQLG+ + PT VE L G Q + G + V G++ +WG
Sbjct: 90 YSMGNNNQGQLGVSVDESYYKSAPTLVEGLKGYKAVQISCGAYHTATVCDNGQLFTWGQN 149
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LG G+ ++ TP+++ +L+ + G ++ I + +++ FGD
Sbjct: 150 CEGQLGIGKSDNMT---------TPQIV-DLKNNLAVFVSCGKRNTMVITQTQKIFGFGD 199
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 15/116 (12%)
Query: 289 LYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 347
+Y WGS+ G LG+ S + S P FS ++ ++CG +HT+ I++ G+
Sbjct: 36 VYVWGSDTYGQLGLASREFGKSCPSPRFTSFS-VVIEDIACGEEHTSFIAQN-----GYV 89
Query: 348 GSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHTGALLE 401
S G +++ GQLG D Y PT+V + KA+Q+SCG HT + +
Sbjct: 90 YSMG------NNNQGQLGVSVDESYYKSAPTLVEGLKGYKAVQISCGAYHTATVCD 139
>gi|281209109|gb|EFA83284.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 853
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 166/379 (43%), Gaps = 51/379 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G G G+LGL + + P V + +K +ACG AH+L +TE G VY+ G G+
Sbjct: 6 FGVGKQGQLGLDVNKDQLDPAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYSWGRGKEGE 65
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGK-----------N 150
LG + + P I L+ E +V+++ G +HS A+T G++Y WG+
Sbjct: 66 LGHPQK-AMTAPPALIKALEHERIVKVACGNYHSLALTDTGKVYQWGQLHEIDATKSGVK 124
Query: 151 SNGQL----GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
S G L G+ A+KV LS + A E+S VL +
Sbjct: 125 SQGGLVEMTGIKSFASKVAD-----HSLSMYLNGEKAAYDEES----ASSSVLQDNPTAN 175
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGDR 265
G + QE + + E G KV +I + +D FG +
Sbjct: 176 GLVTDDQEEEEEFLPEAIVDTQQEQQPEKSGSKVGEIVDKNQMTPVLVD-------FGSK 228
Query: 266 AVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 325
++ K++ A ++ S G +YTWG NE G LG+G H RV S +
Sbjct: 229 SI-KIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGD-RWYHGNPRVIRSLSNKSIVN 286
Query: 326 VSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 384
++CG +H AAIS+ G + TWG G F GQLGHG +HP V + E
Sbjct: 287 IACGRQHMAAISKSGDLYTWGL----GVF--------GQLGHGKLKSLLHPKKVLYFEQQ 334
Query: 385 --KALQVSCGFNHTGALLE 401
K +QV+ G N T A+ E
Sbjct: 335 QKKIVQVATGANFTMAVSE 353
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 136/301 (45%), Gaps = 46/301 (15%)
Query: 57 ESRWRPVVCSAFEKHSLKA--LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+++ PV+ F S+K ++ G A++ +T TG VY G N+ GQLG+ + Y
Sbjct: 215 KNQMTPVLVD-FGSKSIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDR-WYHGN 272
Query: 115 PLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L K +V I+ G H +AI+ G+LY WG GQLG GK K + P KV
Sbjct: 273 PRVIRSLSNKSIVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGK--LKSLLHPKKVLY 330
Query: 174 LSGIFTK--QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL-----GFLRSTSE 226
K Q A G ++AV+ G++ S+G G G+LG +++ + G +
Sbjct: 331 FEQQQKKIVQVATGANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLK 390
Query: 227 YT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
Y+ P+ +K LE VKV+ A G LH+ + +
Sbjct: 391 YSLPKQVKALESVKVRKVACGHLHTIAV------------------------------TT 420
Query: 286 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 345
++YTWG +GCLG G P+RV S + VS G KHT + T+
Sbjct: 421 DNDVYTWGWGSSGCLGFGDRKFQLVPQRVPS-LSGEEISSVSGGEKHTLIVRSSDTTTFA 479
Query: 346 W 346
+
Sbjct: 480 F 480
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 108/229 (47%), Gaps = 30/229 (13%)
Query: 43 WGNGDYGRLGLGSLESRW---RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG + G+LGLG RW P V + S+ +ACG H ++++G +Y GL
Sbjct: 254 WGFNEKGQLGLG---DRWYHGNPRVIRSLSNKSIVNIACGRQHMAAISKSGDLYTWGLGV 310
Query: 100 FGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
FGQL G +++ + + L +K++VQ++TG + + A++ +GEL+ +G GQLG
Sbjct: 311 FGQLGHGKLKSLLHPKKVLYFEQQQKKIVQVATGANFTMAVSENGELFSFGHGEYGQLGA 370
Query: 158 GKKAAKV-------------IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + +P +V+ L + ++ A G ++AVT V +WG G
Sbjct: 371 TEDTQYMDWNNNGDRDDHLKYSLPKQVKALESVKVRKVACGHLHTIAVTTDNDVYTWGWG 430
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
SG LG G L P+ + L G ++ + G H+ +
Sbjct: 431 SSGCLGFGDRKFQL---------VPQRVPSLSGEEISSVSGGEKHTLIV 470
>gi|115439409|ref|NP_001043984.1| Os01g0700200 [Oryza sativa Japonica Group]
gi|56784719|dbj|BAD81868.1| zinc finger protein-like [Oryza sativa Japonica Group]
gi|56785284|dbj|BAD82210.1| zinc finger protein-like [Oryza sativa Japonica Group]
gi|113533515|dbj|BAF05898.1| Os01g0700200 [Oryza sativa Japonica Group]
gi|215704825|dbj|BAG94853.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1044
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 169/402 (42%), Gaps = 71/402 (17%)
Query: 14 LKQDIKLGSKLGIC-KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
L+ D+ L C R ++ T ++ WG GRLG G+ RP + +
Sbjct: 250 LESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTV 309
Query: 73 LKALACGGAHTLFLTETGCVY--ATGLNDFGQLGISENIGYSLEPLRISGLKK--EVVQI 128
+ ++CG HT +T +G ++ G + G LG + Y L P ++SG + +V+ +
Sbjct: 310 VDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWL-PKKVSGPLEGLQVLSV 368
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
+ G HS+ T G+LY +G + G LG G + + + P +VE LSG T + A G
Sbjct: 369 ACGSWHSALTTSSGKLYTFGDGTFGVLGHGDR--ETLAYPKEVEALSGFKTIKVACGIWH 426
Query: 189 SVAV------TGGG----KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
S A+ TG K+ +WG G RLGHG + PRL+ +
Sbjct: 427 SAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKE-------------PRLVPKCVQA 473
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENG 298
+ F AC H +L + G ++T GS+ NG
Sbjct: 474 ---LLEYNFHQLAC-----------------------GHNMTVALATSGRVFTMGSSSNG 507
Query: 299 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH-TAAISEGKILTWGWGGSHGTFSEDG 357
LG D P VQ + V+++SCG H T S ++ TWG G +
Sbjct: 508 QLGNPKSDG-KQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMGAN-------- 558
Query: 358 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G+LGHG+ D P +V ++ +SCG N T +
Sbjct: 559 ----GRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCI 596
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 108/267 (40%), Gaps = 57/267 (21%)
Query: 142 GELYMWGK------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
G++Y+WG+ S+G V+ IP +E + Q A G T
Sbjct: 216 GDVYVWGEVWTDVTPSDGHTSSSCSKVDVL-IPKPLESDVVLDVNQIACGTRHVALTTRQ 274
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG GRLGHG ++ I P+L++ L V + + G H+ +
Sbjct: 275 GEVFTWGEEFGGRLGHGTDADI---------SRPKLVESLSLTVVDLISCGEFHTCAVTT 325
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
+G ++ +GD GS G LG G+ P++V
Sbjct: 326 SGDLFNWGD----------------------------GSYNVGLLGCGTEVSYWLPKKVS 357
Query: 316 GPFSESPVDQVSCG-WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
GP V V+CG W S GK+ T+G GTF G LGHG+ +
Sbjct: 358 GPLEGLQVLSVACGSWHSALTTSSGKLYTFG----DGTF--------GVLGHGDRETLAY 405
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V K ++V+CG H+ A++E
Sbjct: 406 PKEVEALSGFKTIKVACGIWHSAAIVE 432
>gi|301115610|ref|XP_002905534.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262110323|gb|EEY68375.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 456
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 160/375 (42%), Gaps = 72/375 (19%)
Query: 92 VYATGLNDFGQLG----ISENIGYSLE---PLRISGLK-KEVVQISTGYHHSSAITVDGE 143
VY G GQLG I I + E P L+ K + + G HS+AI +G+
Sbjct: 71 VYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGASHSAAIDEEGK 130
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
LY+WG N +LGLG +++++ +P +VE L GI + G + AV GK+ SWG
Sbjct: 131 LYVWGSNEYSKLGLG-ESSEMETLPREVEALKGIKIVDVSCGDYFTAAVDEDGKMYSWGW 189
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVYI 261
GGS + + LG E TPRL+ L +GV + G H+ + ++G ++
Sbjct: 190 GGSTM----KGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVALTKDGEIWA 245
Query: 262 FGDRAVDKMLFQEGNHARRP----------------------SLISGGELYTWGSNENGC 299
+G+ ++ E + P +L GELY+WG N
Sbjct: 246 WGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDKGELYSWGGNSQNQ 305
Query: 300 LGIG---SIDV--LHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG---WGGSH 350
LGIG ++DV + S + F+ V Q++ G+ H AA++E G++ WG W H
Sbjct: 306 LGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAAVTEDGRLYMWGAKIWIEPH 365
Query: 351 GTFSEDGHS--------------------------SGGQLGHGNDVDYIHPTIVNFGENV 384
+ + H S LGHG+ + + P + V
Sbjct: 366 EMTAVNEHKMTQVACGRQYTVGLTDDGKVFTFGKGSSNCLGHGDRKNQLQPVKIQALAGV 425
Query: 385 KALQVSCGFNHTGAL 399
VSCG H GA+
Sbjct: 426 NITSVSCGDYHMGAI 440
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 145/315 (46%), Gaps = 25/315 (7%)
Query: 42 LWGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+WG+ +Y +LGLG S E P A + + ++CG T + E G +Y+ G
Sbjct: 133 VWGSNEYSKLGLGESSEMETLPREVEALKGIKIVDVSCGDYFTAAVDEDGKMYSWGWGGS 192
Query: 101 GQLGISENIGYSLE----PLRISGLKKEVVQIST---GYHHSSAITVDGELYMWGKNSNG 153
G + P ++ L + V I+T G H+ A+T DGE++ WG G
Sbjct: 193 TMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVALTKDGEIWAWGNGEYG 252
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+LG G+ +P P +E S A G + S A+T G++ SWG +LG G
Sbjct: 253 RLGNGESDTCEVPEP--IEFFSKDNVVSIAAGRDFSFALTDKGELYSWGGNSQNQLGIG- 309
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR-------- 265
L E P L++ G+ VK AAG+ H+A + E+GR+Y++G +
Sbjct: 310 --GGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAAVTEDGRLYMWGAKIWIEPHEM 367
Query: 266 -AVDKMLFQEGNHARRPS--LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
AV++ + R+ + L G+++T+G + CLG G P ++Q +
Sbjct: 368 TAVNEHKMTQVACGRQYTVGLTDDGKVFTFGKGSSNCLGHGDRKNQLQPVKIQA-LAGVN 426
Query: 323 VDQVSCGWKHTAAIS 337
+ VSCG H AI+
Sbjct: 427 ITSVSCGDYHMGAIA 441
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 123/299 (41%), Gaps = 61/299 (20%)
Query: 144 LYMWGKNSNGQLGLGK------KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+Y WG + GQLG G ++A P E L G G S A+ GK
Sbjct: 71 VYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGASHSAAIDEEGK 130
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+ WG+ +LG G+ S + E PR ++ L+G+K+ + G +A +DE+G
Sbjct: 131 LYVWGSNEYSKLGLGESSEM--------ETLPREVEALKGIKIVDVSCGDYFTAAVDEDG 182
Query: 258 RVYIFG------------------DRAVDKMLFQ-----------EGNHARRPSLISGGE 288
++Y +G D ++L E +L GE
Sbjct: 183 KMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVALTKDGE 242
Query: 289 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGG 348
++ WG+ E G LG G D PE ++ FS+ V ++ G + A+++ L + WGG
Sbjct: 243 IWAWGNGEYGRLGNGESDTCEVPEPIE-FFSKDNVVSIAAGRDFSFALTDKGEL-YSWGG 300
Query: 349 SHGTFSEDGHSSGGQLGHGN----DVDYIH--PTIVNFGENVKALQVSCGFNHTGALLE 401
+S QLG G DV I P +V + Q++ G++H A+ E
Sbjct: 301 ----------NSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAAVTE 349
>gi|449081281|sp|Q9R0X5.2|RPGR_MOUSE RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
Short=mRpgr; Flags: Precursor
Length = 1001
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 170/385 (44%), Gaps = 57/385 (14%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 28 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 85
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 86 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 145
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G + G+
Sbjct: 146 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 201
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E +L RS P+ + + +++A G
Sbjct: 202 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGG-- 252
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVL 308
G + ++ V Y +G + G LG+G+
Sbjct: 253 --------GHTVVLTEKVV----------------------YAFGLGQFGQLGLGTFLFE 282
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
S ++ + + +SCG HTA ++E G + T+G G HG LG
Sbjct: 283 TSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG-DGRHGKLG---------LGME 332
Query: 368 NDVDYIHPTIVNFGENVKALQVSCG 392
N + PT+ + ++CG
Sbjct: 333 NFTNQFFPTLCSNFLRFAVQLIACG 357
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 158/340 (46%), Gaps = 57/340 (16%)
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
+ +TG V+ FG+ +ENI P + + +S G H++ +T + +L
Sbjct: 7 LVPDTGAVFT-----FGKTKFAENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKL 56
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
YM+G N+ GQLGLG KAA I PT ++ L K AA G ++ T G V + G
Sbjct: 57 YMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGN 114
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LG G F + +TP +K +AG SA + E+G+++++GD
Sbjct: 115 NEGQLGLGDTDDRDTFHQIVF-FTP-------ADTIKQLSAGANTSAALTEDGKLFMWGD 166
Query: 265 RAVDKMLFQEGNHARRPSLIS--------------------GGELYTWGSNENGCLGIGS 304
+ ++ ++ ++ P ++ GELYT+G ENG LG+ +
Sbjct: 167 NSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPN 226
Query: 305 IDVLH--SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
+++ SP+RV G E V QV+CG HT ++E + +G G G
Sbjct: 227 ELLMNHRSPQRVLG-IPER-VIQVACGGGHTVVLTEKVVYAFGLG------------QFG 272
Query: 363 QLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QLG G + + P I+ ++ K +SCG NHT + E
Sbjct: 273 QLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 312
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 51/245 (20%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E + VTG K+ +G+ G+LG G +++I+ P IK L+ KVK+AA
Sbjct: 43 GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAA 93
Query: 245 AGFLHSACIDENGRVYIFG-------------DRAV--DKMLFQEGNHARRPS------- 282
G H+ + G VY G DR + F + ++ S
Sbjct: 94 CGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSA 153
Query: 283 -LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 340
L G+L+ WG N G +G+ + P V P+ +SCG+ H+A ++ +G+
Sbjct: 154 ALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT---VGKPISWISCGYYHSAFVTMDGE 210
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHTGA 398
+ T+G G+LG N++ H P V G + +QV+CG HT
Sbjct: 211 LYTFG------------EPENGKLGLPNELLMNHRSPQRV-LGIPERVIQVACGGGHTVV 257
Query: 399 LLEYV 403
L E V
Sbjct: 258 LTEKV 262
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 319 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 364
>gi|356576039|ref|XP_003556142.1| PREDICTED: uncharacterized protein LOC100811999 [Glycine max]
Length = 1098
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 164/373 (43%), Gaps = 71/373 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G ++ +P + A ++ +ACG HT +T G +Y G ++
Sbjct: 303 WGEESGGRLGHGVGKNVVQPRLVEAMASTTVDFVACGEFHTCAVTMAGELYTWGDGTHNA 362
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P RI+G + +V ++ G H++ IT G+L+ +G + G LG G
Sbjct: 363 GLLGHGTDVSHWI-PKRIAGPLEGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHG 421
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
+ + + P +VE LSG+ T A G QS A GK+ +WG G
Sbjct: 422 DR--ENVSYPREVESLSGLRTIAVACGVWHTAAIIEVIVTQSSASVSSGKLFTWGDGDKN 479
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + + R P LI++ F AC
Sbjct: 480 RLGHGDKDA-----RLEPTCVPSLIED-----------NFHRIAC--------------- 508
Query: 268 DKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
H+ L + G ++T GS G LG D P V+ F+ V++++
Sbjct: 509 --------GHSLTVGLTTSGRVFTMGSTVYGQLGNPQSDG-KLPCLVEDKFAGESVEEIA 559
Query: 328 CGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG H A + S+ ++ TWG G + G+LGHG+ D PT+V ++
Sbjct: 560 CGAYHVAVLTSKNEVFTWGKGAN------------GRLGHGDVEDRKSPTLVEALKDRHV 607
Query: 387 LQVSCGFNHTGAL 399
++CG N++ A+
Sbjct: 608 KYIACGSNYSSAI 620
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 121/274 (44%), Gaps = 64/274 (23%)
Query: 142 GELYMWGK---NSNGQLGLGKKAAKVIP-----IPTKVECLSGIFTKQAALGFEQSVAVT 193
G++Y+WG+ + ++G K A+ P +P +E + Q A G + + VT
Sbjct: 236 GDVYIWGEVICENVVKVGAEKSASYFSPRTDILLPRPLESNVVLDVLQIACGVKHAALVT 295
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G++ +WG GRLGHG +++ PRL++ + V A G H+ +
Sbjct: 296 RQGELFTWGEESGGRLGHGVGKNVV---------QPRLVEAMASTTVDFVACGEFHTCAV 346
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW--GSNENGCLGIGSIDVLH-S 310
GELYTW G++ G LG G+ DV H
Sbjct: 347 ------------------------------TMAGELYTWGDGTHNAGLLGHGT-DVSHWI 375
Query: 311 PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 369
P+R+ GP V V+CG HTA I S G++ T+G GTF G LGHG+
Sbjct: 376 PKRIAGPLEGLQVALVTCGPWHTALITSTGQLFTFG----DGTF--------GVLGHGDR 423
Query: 370 VDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
+ +P V ++ + V+CG HT A++E +
Sbjct: 424 ENVSYPREVESLSGLRTIAVACGVWHTAAIIEVI 457
>gi|5824124|emb|CAB54041.1| RPGR protein [Mus musculus]
Length = 1001
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 170/385 (44%), Gaps = 57/385 (14%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 28 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 85
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 86 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 145
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G + G+
Sbjct: 146 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 201
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E +L RS P+ + + +++A G
Sbjct: 202 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGG-- 252
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVL 308
G + ++ V Y +G + G LG+G+
Sbjct: 253 --------GHTVVLTEKVV----------------------YAFGLGQFGQLGLGTFLFE 282
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
S ++ + + +SCG HTA ++E G + T+G G HG LG
Sbjct: 283 TSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG-DGRHGKLG---------LGME 332
Query: 368 NDVDYIHPTIVNFGENVKALQVSCG 392
N + PT+ + ++CG
Sbjct: 333 NFTNQFFPTLCSNFLRFAVQLIACG 357
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 158/340 (46%), Gaps = 57/340 (16%)
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
+ +TG V+ FG+ +ENI P + + +S G H++ +T + +L
Sbjct: 7 LVPDTGAVFT-----FGKTKFAENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKL 56
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
YM+G N+ GQLGLG KAA I PT ++ L K AA G ++ T G V + G
Sbjct: 57 YMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGN 114
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LG G F + +TP +K +AG SA + E+G+++++GD
Sbjct: 115 NEGQLGLGDTDDRDTFHQIVF-FTP-------ADTIKQLSAGANTSAALTEDGKLFMWGD 166
Query: 265 RAVDKMLFQEGNHARRPSLIS--------------------GGELYTWGSNENGCLGIGS 304
+ ++ ++ ++ P ++ GELYT+G ENG LG+ +
Sbjct: 167 NSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPN 226
Query: 305 IDVLH--SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
+++ SP+RV G E V QV+CG HT ++E + +G G G
Sbjct: 227 ELLMNHRSPQRVLG-IPER-VIQVACGGGHTVVLTEKVVYAFGLG------------QFG 272
Query: 363 QLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QLG G + + P I+ ++ K +SCG NHT + E
Sbjct: 273 QLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 312
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 51/245 (20%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E + VTG K+ +G+ G+LG G +++I+ P IK L+ KVK+AA
Sbjct: 43 GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAA 93
Query: 245 AGFLHSACIDENGRVYIFG-------------DRAV--DKMLFQEGNHARRPS------- 282
G H+ + G VY G DR + F + ++ S
Sbjct: 94 CGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSA 153
Query: 283 -LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 340
L G+L+ WG N G +G+ + P V P+ +SCG+ H+A ++ +G+
Sbjct: 154 ALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT---VGKPISWISCGYYHSAFVTMDGE 210
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHTGA 398
+ T+G G+LG N++ H P V G + +QV+CG HT
Sbjct: 211 LYTFG------------EPENGKLGLPNELLMNHRSPQRV-LGIPERVIQVACGGGHTVV 257
Query: 399 LLEYV 403
L E V
Sbjct: 258 LTEKV 262
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 319 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 364
>gi|302803759|ref|XP_002983632.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
gi|300148469|gb|EFJ15128.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
Length = 863
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 164/372 (44%), Gaps = 78/372 (20%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
++ +ACG HT +T G V++ G G+LG + ++ + P I L VQ ++
Sbjct: 125 VQQIACGVRHTALVTRQGEVFSWGEESGGRLGHGVDADVAH---PQLIDSLASSTVQYVA 181
Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
G +HS A+T G+LY WG ++ G LG G + P L G+ A G
Sbjct: 182 CGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGP-LEGVRVSSVACGPW 240
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+V VT G++ S+G G G LGHG S PR ++ L+G+K AA G
Sbjct: 241 HTVLVTSTGQLFSFGDGTFGVLGHGDRKSA---------SMPREVESLKGLKTLRAACGP 291
Query: 248 LHSACIDE------------NGRVYIFGD---------------------RAVDKMLFQE 274
H+A + E +G+++ +GD VD Q
Sbjct: 292 WHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQV 351
Query: 275 G-NHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPE---RVQGPFS--ESPVDQVSC 328
H+ +L + G LYT GS G LG P+ R+ G + +++VSC
Sbjct: 352 ACGHSLTVALTTTGHLYTMGSVSYGQLG--------DPQATGRLPGVLRLGRTLIEEVSC 403
Query: 329 GWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 387
G H AA+ S+G + TWG G + G+LGHG+ D PT+V + +
Sbjct: 404 GAYHVAALTSKGDVCTWGKGAN------------GRLGHGDAEDRDVPTLVEALRDKQVK 451
Query: 388 QVSCGFNHTGAL 399
+VSCG + T A+
Sbjct: 452 KVSCGSSFTSAI 463
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 117/269 (43%), Gaps = 55/269 (20%)
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIP----IPTKVECLSGIFTKQAALGFEQSVAVTGG 195
V GEL+MWG+ G G+ KK +P V L + +Q A G + VT
Sbjct: 83 VFGELWMWGEGI-GDGGVTKKLDTSFRTDAFLPRAVRSLVVLDVQQIACGVRHTALVTRQ 141
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V SWG GRLGHG ++ + P+LI L V+ A G HS + +
Sbjct: 142 GEVFSWGEESGGRLGHGVDADVA---------HPQLIDSLASSTVQYVACGEYHSCAVTQ 192
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
+G +Y +GD G++ G LG G+ +P+RV
Sbjct: 193 SGDLYTWGD----------------------------GTHNFGLLGHGNSISHWTPKRVG 224
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
GP V V+CG HT + S G++ ++G GTF G LGHG+
Sbjct: 225 GPLEGVRVSSVACGPWHTVLVTSTGQLFSFG----DGTF--------GVLGHGDRKSASM 272
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLEYV 403
P V + +K L+ +CG HT A++E +
Sbjct: 273 PREVESLKGLKTLRAACGPWHTAAVVEVM 301
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 81/150 (54%), Gaps = 4/150 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G E + P +A H+ + +ACG + T+ LT TG +Y G +GQ
Sbjct: 318 WGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVALTTTGHLYTMGSVSYGQ 377
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + G LR+ + + ++S G +H +A+T G++ WGK +NG+LG G A
Sbjct: 378 LGDPQATGRLPGVLRLG--RTLIEEVSCGAYHVAALTSKGDVCTWGKGANGRLGHGD--A 433
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ +PT VE L K+ + G + A+
Sbjct: 434 EDRDVPTLVEALRDKQVKKVSCGSSFTSAI 463
>gi|308799813|ref|XP_003074688.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
gi|116000858|emb|CAL50538.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
Length = 604
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 174/387 (44%), Gaps = 45/387 (11%)
Query: 41 ALWGNGDYGRLGLGSLESRWRPVVC----------SAFEKH--SLKALACGGAHTLFLTE 88
A +G G +G+LGLGS ++ P + ++H + ++A GG+H + L+
Sbjct: 166 ATFGRGFHGQLGLGSYDNHAAPAFVRMGDELARGHDSDDEHFEGVDSIALGGSHCVALSR 225
Query: 89 TGCVYATGLNDFGQLGISENIGYSLE-PLRI---SGLKKEVVQISTGYHHSSAITVDGEL 144
G V + GL G+LG + N + P R+ + ++ Q++TG +H+ AI G L
Sbjct: 226 DGGVISWGLASSGELGYTGNTPIEVNVPRRVFVGIDICTKITQVTTGSNHTMAIDEFGRL 285
Query: 145 YMWGKNSNGQLGLG--KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+ G+ +GQLG G + AA ++VE L G+ A G SV +T G V +WG
Sbjct: 286 FACGRGRHGQLGHGTFRDAAPF----SRVEALKGMHVVSAVCGGSHSVCITSDGNVWAWG 341
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA--AAGFLHSACIDENGRVY 260
G+LG G + + P L++ L + +A +AG HS + GR++
Sbjct: 342 DCRYGQLGLGDLTFAAAAGWNNGVPWPCLVESLNDMDEPVASVSAGGAHSIFVTAGGRMF 401
Query: 261 IFGDRAVDKMLFQEGNH-----ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
+ G G H + P L G G+ L ++++ H R
Sbjct: 402 VCG----------RGKHGALGVGKNPFLTIGPPTSACGNR----LTPEAVNIHHFVRRAD 447
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G ++ V Q SCG + A+ + G + G F+ G +S GQLGHG+
Sbjct: 448 GSVDQNRVQQCSCGPRCRVAVAAAGATHSCCLTACGGVFTT-GENSYGQLGHGDKKSTFV 506
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
T V + + V+ G NHTGA++E
Sbjct: 507 FTRVEALRGKRVITVASGHNHTGAMVE 533
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 131/328 (39%), Gaps = 80/328 (24%)
Query: 37 RRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
R FA G G +G+LG G+ A + + + CGG+H++ +T G V+A G
Sbjct: 284 RLFAC--GRGRHGQLGHGTFRDAAPFSRVEALKGMHVVSAVCGGSHSVCITSDGNVWAWG 341
Query: 97 LNDFGQLGISE---------NIGYSLEPL--RISGLKKEVVQISTGYHHSSAITVDGELY 145
+GQLG+ + N G L ++ + + V +S G HS +T G ++
Sbjct: 342 DCRYGQLGLGDLTFAAAAGWNNGVPWPCLVESLNDMDEPVASVSAGGAHSIFVTAGGRMF 401
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPT-------------------------------KVECL 174
+ G+ +G LG+GK I PT + C
Sbjct: 402 VCGRGKHGALGVGKNPFLTIGPPTSACGNRLTPEAVNIHHFVRRADGSVDQNRVQQCSCG 461
Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
AA G S +T G V + G G+LGHG + S F R ++
Sbjct: 462 PRCRVAVAAAGATHSCCLTACGGVFTTGENSYGQLGHGDKKSTFVFTR---------VEA 512
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGS 294
L G +V A+G H+ + EN +G+++ LYTWG
Sbjct: 513 LRGKRVITVASGHNHTGAMVEN----------------TDGSNS----------LYTWGR 546
Query: 295 NENGCLGIGSIDVLHSPERVQGPFSESP 322
+ G LG G++ +P+ V+G F+ +P
Sbjct: 547 GDWGQLGTGNMRSYTTPQEVKG-FNVAP 573
>gi|417407323|gb|JAA50277.1| Putative rcc1 and btb domain-containing protein 2, partial
[Desmodus rotundus]
Length = 511
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 113/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 109 WGHNAYNQLGNGTTNHGSVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGCNNSG 168
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++G + VV I+ G S A+ GE+Y+WG N NGQLGLG
Sbjct: 169 QVGSGSTANQPI-PRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVWGYNGNGQLGLGS 227
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++ L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 228 SGNH--STPCRIAALQGIRVQRVACGYAHTLVLTDDGQVYAWGANSYGQLGTGN------ 279
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y ++ E + + ++IAA H SA + G VY++G
Sbjct: 280 --KSNQSYPTPVVVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 321
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 115/226 (50%), Gaps = 16/226 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
+ G G LGLG ++S P + + L+ G G H + T G V+ G N +
Sbjct: 55 VLGTNCCGCLGLGDIQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAY 114
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG + + P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G
Sbjct: 115 NQLG-NGTTNHGSVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGCNNSGQVGSG 173
Query: 159 KKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
A + PIP +V CL A G S+AV G+V WG G+G+LG G
Sbjct: 174 STANQ--PIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVWGYNGNGQLGLGS---- 227
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S + TP I L+G++V+ A G+ H+ + ++G+VY +G
Sbjct: 228 -----SGNHSTPCRIAALQGIRVQRVACGYAHTLVLTDDGQVYAWG 268
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 142/347 (40%), Gaps = 60/347 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L++T ++ G N G LG+ + I ++E
Sbjct: 16 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYMTVNDEIFVLGTNCCGCLGLGD-IQSTIE 74
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G +P
Sbjct: 75 PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYNQLGNGTTNHGSVPCHISTN 134
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G ++ R T R++
Sbjct: 135 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGCNNSGQVGSGSTANQPIPRRVTGCLQNRVV 193
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTW 292
V IA A +D GE+Y W
Sbjct: 194 -------VNIACGQMCSMAVVD-------------------------------SGEVYVW 215
Query: 293 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 351
G N NG LG+GS +P R+ V +V+CG+ HT +++ G++ WG
Sbjct: 216 GYNGNGQLGLGSSGNHSTPCRI-AALQGIRVQRVACGYAHTLVLTDDGQVYAWG------ 268
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 269 ------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSA 309
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS + P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 214 VWGYNGNGQLGLGSSGNHSTPCRIAALQGIRVQRVACGYAHTLVLTDDGQVYAWGANSYG 273
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 274 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 326
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T + C +F
Sbjct: 327 --SVILPHLTHLSCTDDVF 343
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 96/235 (40%), Gaps = 46/235 (19%)
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHS 250
+T ++ G G LG LG ++ST E PR + L G K+ + G H
Sbjct: 47 MTVNDEIFVLGTNCCGCLG-------LGDIQSTIE--PRRLDSLSGKKIACLSYGSGPHI 97
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPS-----------------------LISGG 287
G V+ +G A +++ NH P L S G
Sbjct: 98 VLATTEGEVFTWGHNAYNQLGNGTTNHGSVPCHISTNLSNKQVIEVACGSYHSLVLTSDG 157
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGW 346
E++ WG N +G +G GS P RV G V ++CG + A+ + G++ WG+
Sbjct: 158 EVFAWGCNNSGQVGSGSTANQPIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVWGY 217
Query: 347 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G+ GQLG G+ ++ P + + ++ +V+CG+ HT L +
Sbjct: 218 NGN------------GQLGLGSSGNHSTPCRIAALQGIRVQRVACGYAHTLVLTD 260
>gi|256077780|ref|XP_002575178.1| ubiquitin ligase [Schistosoma mansoni]
gi|360043621|emb|CCD81167.1| putative hect E3 ubiquitin ligase [Schistosoma mansoni]
Length = 1175
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 177/398 (44%), Gaps = 70/398 (17%)
Query: 31 ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL---ACGGAHTLFLT 87
+SS + FA WG+ + G+L L ++ ++ ++ A + +L L CG HT+FLT
Sbjct: 2 VSSATEELFA--WGSCEEGQLTLDKNDA-YQILIPKALDVRNLPTLIQITCGYTHTVFLT 58
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYM 146
G VY+ G N+F QLG ++ G + ++ L+ ++ ++ G +H++AIT +G L+
Sbjct: 59 IDGEVYSCGCNEFQQLGHGQSGG---QLAKVVALEHYRIISVACGAYHNAAITYNGLLFT 115
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG NSNGQLG V V LS Q +LG E ++ +T +V ++G+
Sbjct: 116 WGCNSNGQLGREGDDTGV----KLVRALSDHKVVQVSLGVEHTLVLTDTARVFAFGSNLK 171
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG LG+ S P+ I L G+ V+ AG HS + +G +Y +G
Sbjct: 172 GQLG-------LGYSSEQSVSIPQQILCLSGLPVRRIVAGGWHSFVLTVSGSLYAWGSNN 224
Query: 267 VDKMLF-----QEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
++ +H +L + G +G S+D S R P S
Sbjct: 225 YGQLGLSYFGSSPNDHQNELTL------------KCGSVGSTSVDDEQSKNRPFSPLDTS 272
Query: 322 ----------------PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQL 364
V ++CG HT A++ +G + T+G G GQL
Sbjct: 273 LSNVSIPTFVKTLRGCEVVYLACGETHTVALTRDGGVFTFGAG------------RYGQL 320
Query: 365 GHGNDV--DYIHPTIVNFGENVKALQVSCGFNHTGALL 400
GH + I F NV Q++CG HT AL+
Sbjct: 321 GHNESTIGISVPRKITEFMGNV-VTQIACGRFHTLALV 357
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 116/264 (43%), Gaps = 55/264 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG ++ + V A H + ++ G HTL LT+T V+A G N GQ
Sbjct: 116 WGCNSNGQLGREGDDTGVKLV--RALSDHKVVQVSLGVEHTLVLTDTARVFAFGSNLKGQ 173
Query: 103 LGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
LG+ +++ + L +SGL V +I G HS +TV G LY WG N+ GQLGL
Sbjct: 174 LGLGYSSEQSVSIPQQILCLSGLP--VRRIVAGGWHSFVLTVSGSLYAWGSNNYGQLGLS 231
Query: 159 --------------------------KKAAKVIP------------IPTKVECLSGIFTK 180
+ +K P IPT V+ L G
Sbjct: 232 YFGSSPNDHQNELTLKCGSVGSTSVDDEQSKNRPFSPLDTSLSNVSIPTFVKTLRGCEVV 291
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
A G +VA+T G V ++GAG G+LGH + S +G PR I E G V
Sbjct: 292 YLACGETHTVALTRDGGVFTFGAGRYGQLGHNE--STIGI------SVPRKITEFMGNVV 343
Query: 241 KIAAAGFLHS-ACIDENGRVYIFG 263
A G H+ A + + GR++ FG
Sbjct: 344 TQIACGRFHTLALVPKTGRLFAFG 367
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISEN-IGYSLEPLRISGLKKEVV-QISTGYH 133
LACG HT+ LT G V+ G +GQLG +E+ IG S+ P +I+ VV QI+ G
Sbjct: 293 LACGETHTVALTRDGGVFTFGAGRYGQLGHNESTIGISV-PRKITEFMGNVVTQIACGRF 351
Query: 134 HSSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
H+ A+ G L+ +G+ +N QLG+G +++P P K
Sbjct: 352 HTLALVPKTGRLFAFGQGTNAQLGMGDTKNRLLPCPVK 389
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 98/238 (41%), Gaps = 46/238 (19%)
Query: 24 LGICKRWISSTLQRRFAALWGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGA 81
LG+ + + R FA +G+ G+LGLG S +S P ++ + GG
Sbjct: 149 LGVEHTLVLTDTARVFA--FGSNLKGQLGLGYSSEQSVSIPQQILCLSGLPVRRIVAGGW 206
Query: 82 HTLFLTETGCVYATGLNDFGQLGIS----------------------------------- 106
H+ LT +G +YA G N++GQLG+S
Sbjct: 207 HSFVLTVSGSLYAWGSNNYGQLGLSYFGSSPNDHQNELTLKCGSVGSTSVDDEQSKNRPF 266
Query: 107 ENIGYSLEPLRISGLKK-----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+ SL + I K EVV ++ G H+ A+T DG ++ +G GQLG +
Sbjct: 267 SPLDTSLSNVSIPTFVKTLRGCEVVYLACGETHTVALTRDGGVFTFGAGRYGQLGHNEST 326
Query: 162 AKVIPIPTKVECLSGIFTKQAALG-FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
I +P K+ G Q A G F V G++ ++G G + +LG G + L
Sbjct: 327 IG-ISVPRKITEFMGNVVTQIACGRFHTLALVPKTGRLFAFGQGTNAQLGMGDTKNRL 383
>gi|47214873|emb|CAG00921.1| unnamed protein product [Tetraodon nigroviridis]
Length = 565
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 137/305 (44%), Gaps = 61/305 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+ G + RPV S ++ ++CG H LFLTE GCV + G N GQ
Sbjct: 4 WGDSSSGQFGPRTAT---RPV--SWTVPRTVIDISCGDRHILFLTEDGCVLSCGNNSDGQ 58
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + P + GL VVQIS G +HS A+ G ++ WG +GQLGL
Sbjct: 59 LGRKKK-HKNKAPGCVEGL-GHVVQISCGCNHSLAVDASGHVFSWGAAEDGQLGLNPNPL 116
Query: 163 KVIP--IPTKVECLS-GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P +PT + + + Q A G SVA+T GG VLSWG+ G+LG G E
Sbjct: 117 SGRPRRVPTGMVTIPLRVPVVQVACGKSHSVALTTGGDVLSWGSNSYGQLGLGTEVP--- 173
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S+ TP L+ L GV V +AG H+ +F
Sbjct: 174 -----SQETPALVAGLVGVPVSQISAGATHT--------------------MF------- 201
Query: 280 RPSLISGGELYTWGSNENGCLGI------GSIDVLHSPE-RVQGPFSESPVDQVSCGWKH 332
L G +Y G+N++G LG+ G DV P R G V +SCG H
Sbjct: 202 ---LTLAGLVYCCGANQSGQLGLNRVDEKGRFDVCMVPRLRPLG------VCFISCGEAH 252
Query: 333 TAAIS 337
TAA++
Sbjct: 253 TAALT 257
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 110/285 (38%), Gaps = 59/285 (20%)
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI-FT 179
+ + V+ IS G H +T DG + G NS+GQLG KK P C+ G+
Sbjct: 25 VPRTVIDISCGDRHILFLTEDGCVLSCGNNSDGQLGRKKKHKNKAP-----GCVEGLGHV 79
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR-LIKELEGV 238
Q + G S+AV G V SWGA G+LG L P ++ V
Sbjct: 80 VQISCGCNHSLAVDASGHVFSWGAAEDGQLGLNPNP-----LSGRPRRVPTGMVTIPLRV 134
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENG 298
V A G HS +L +GG++ +WGSN G
Sbjct: 135 PVVQVACGKSHSV------------------------------ALTTGGDVLSWGSNSYG 164
Query: 299 CLGIGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 357
LG+G+ + +P V G PV Q+S G HT ++ G G
Sbjct: 165 QLGLGTEVPSQETPALVAG-LVGVPVSQISAGATHTMFLTLA-----------GLVYCCG 212
Query: 358 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQV---SCGFNHTGAL 399
+ GQLG N VD V ++ L V SCG HT AL
Sbjct: 213 ANQSGQLGL-NRVDEKGRFDVCMVPRLRPLGVCFISCGEAHTAAL 256
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 105/265 (39%), Gaps = 72/265 (27%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVI--PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
LY WG +S+GQ G + A + + +P V +S G + +T G VLS
Sbjct: 1 LYCWGDSSSGQFG-PRTATRPVSWTVPRTVIDIS--------CGDRHILFLTEDGCVLSC 51
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G+LG ++ P ++ L G V+I+ G HS +D +G V+
Sbjct: 52 GNNSDGQLGRKKKHK---------NKAPGCVEGL-GHVVQISC-GCNHSLAVDASGHVF- 99
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG----- 316
+WG+ E+G LG+ + P RV
Sbjct: 100 -----------------------------SWGAAEDGQLGLNPNPLSGRPRRVPTGMVTI 130
Query: 317 PFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH- 374
P PV QV+CG H+ A++ G +L+W G +S GQLG G +V
Sbjct: 131 PL-RVPVVQVACGKSHSVALTTGGDVLSW------------GSNSYGQLGLGTEVPSQET 177
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V V Q+S G HT L
Sbjct: 178 PALVAGLVGVPVSQISAGATHTMFL 202
>gi|260796835|ref|XP_002593410.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
gi|229278634|gb|EEN49421.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
Length = 538
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 117/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG GS P ++ + + +ACG H+L LT G V+A G N+ G
Sbjct: 106 WGHNGYSQLGNGSTNQGLSPQLITTNLIGRKVVKVACGSHHSLALTLEGEVFAWGYNNCG 165
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S P +++ ++V +I+ G S A+ +GE+Y WG N NGQLG+G
Sbjct: 166 QVG-SGTTTNQATPRKVAACLGTRKVTEIACGQTSSMALLDNGEVYGWGYNGNGQLGVGN 224
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L + Q G+ ++A+T G V +WGA G+LG G +++++
Sbjct: 225 NVNQ--PNPCRVAALQQMIVVQIVCGYAHAMALTDEGSVYAWGANSYGQLGTGNKANLV- 281
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
TP I +G V+I A + H S+ I + G+VY++G
Sbjct: 282 --------TPTKIALDKGRFVEIGATHYNHVSSAITQTGKVYMWG 318
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 133/303 (43%), Gaps = 53/303 (17%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG+G +S P K + + G G H L T+ G +Y+ G N + QLG S N
Sbjct: 61 LGVGDAQSGLEPRKIDILCKKKIVDIGYGSGPHVLVCTDNGDLYSWGHNGYSQLGNGSTN 120
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G S + + + + ++VV+++ G HHS A+T++GE++ WG N+ GQ+G G + P
Sbjct: 121 QGLSPQLITTNLIGRKVVKVACGSHHSLALTLEGEVFAWGYNNCGQVGSGTTTNQATPRK 180
Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
CL + A G S+A+ G+V WG G+G+LG G + ++
Sbjct: 181 VAA-CLGTRKVTEIACGQTSSMALLDNGEVYGWGYNGNGQLGVG---------NNVNQPN 230
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGE 288
P + L+ + V G+ H+ + + G V
Sbjct: 231 PCRVAALQQMIVVQIVCGYAHAMALTDEGSV----------------------------- 261
Query: 289 LYTWGSNENGCLGIGSIDVLHSPERV---QGPFSE---SPVDQVSCGWKHTAAISEGKIL 342
Y WG+N G LG G+ L +P ++ +G F E + + VS +A GK+
Sbjct: 262 -YAWGANSYGQLGTGNKANLVTPTKIALDKGRFVEIGATHYNHVS-----SAITQTGKVY 315
Query: 343 TWG 345
WG
Sbjct: 316 MWG 318
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 134/304 (44%), Gaps = 60/304 (19%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGY-HHSSA 137
G + +T+ VYA G N LG+ + LEP +I L KK++V I G H
Sbjct: 38 GNEAIVITQDDDVYALGSNCSSCLGVGDAQS-GLEPRKIDILCKKKIVDIGYGSGPHVLV 96
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIP--IPTKVECLSGIFTKQAALGFEQSVAVTGG 195
T +G+LY WG N QLG G + P I T L G + A G S+A+T
Sbjct: 97 CTDNGDLYSWGHNGYSQLGNGSTNQGLSPQLITTN---LIGRKVVKVACGSHHSLALTLE 153
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG G++G G +T++ TPR K+AA
Sbjct: 154 GEVFAWGYNNCGQVGSG---------TTTNQATPR----------KVAAC---------- 184
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G R V ++ + + +L+ GE+Y WG N NG LG+G+ +P RV
Sbjct: 185 ------LGTRKVTEIACGQTSSM---ALLDNGEVYGWGYNGNGQLGVGNNVNQPNPCRV- 234
Query: 316 GPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ V Q+ CG+ H A++ EG + WG +S GQLG GN + +
Sbjct: 235 AALQQMIVVQIVCGYAHAMALTDEGSVYAWG------------ANSYGQLGTGNKANLVT 282
Query: 375 PTIV 378
PT +
Sbjct: 283 PTKI 286
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 123/294 (41%), Gaps = 61/294 (20%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L+P IS +K+ V S+G + + IT D ++Y G N + LG+G + + P +
Sbjct: 20 LDPEFISSIKQACVFGSSG-NEAIVITQDDDVYALGSNCSSCLGVGDAQSGLEPRKIDIL 78
Query: 173 CLSGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
C I +G+ + T G + SWG G +LG+G + L +P
Sbjct: 79 CKKKIVD----IGYGSGPHVLVCTDNGDLYSWGHNGYSQLGNGSTNQGL---------SP 125
Query: 230 RLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGE 288
+LI L G KV A G HS +L GE
Sbjct: 126 QLITTNLIGRKVVKVACGSHHSL------------------------------ALTLEGE 155
Query: 289 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 347
++ WG N G +G G+ +P +V V +++CG + A+ G++ WG+
Sbjct: 156 VFAWGYNNCGQVGSGTTTNQATPRKVAACLGTRKVTEIACGQTSSMALLDNGEVYGWGYN 215
Query: 348 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G+ GQLG GN+V+ +P V + + +Q+ CG+ H AL +
Sbjct: 216 GN------------GQLGVGNNVNQPNPCRVAALQQMIVVQIVCGYAHAMALTD 257
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 75/147 (51%), Gaps = 4/147 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG+G+ ++ P +A ++ + + CG AH + LT+ G VYA G N +GQ
Sbjct: 212 WGYNGNGQLGVGNNVNQPNPCRVAALQQMIVVQIVCGYAHAMALTDEGSVYAWGANSYGQ 271
Query: 103 LGISENIGYSLEPLRISGLKKEVVQI-STGYHH-SSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N + P +I+ K V+I +T Y+H SSAIT G++YMWG+ GQ
Sbjct: 272 LG-TGNKANLVTPTKIALDKGRFVEIGATHYNHVSSAITQTGKVYMWGQ-CRGQSITSPM 329
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE 187
+ + C S L FE
Sbjct: 330 ETRFSTVDDAFACFSMPAVTWRPLSFE 356
>gi|119629205|gb|EAX08800.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Homo sapiens]
Length = 310
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 95/177 (53%), Gaps = 6/177 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + + P R++G K VV I+ G A+ GE+Y+WG N NGQLGLG
Sbjct: 183 QVGSGSTVNQPI-PRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN 241
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G +S+
Sbjct: 242 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 296
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 115/226 (50%), Gaps = 16/226 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG---------NSG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL 289
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 147/348 (42%), Gaps = 67/348 (19%)
Query: 45 NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
+GD G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 9 SGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
G N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+
Sbjct: 69 VLGTNCCGCLGLGD-VQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNA 127
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QLG G ++P LS + A G S+ +T G+V +WG SG++G
Sbjct: 128 YSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G + ++ PR + + C+ V I A +M
Sbjct: 187 GS---------TVNQPIPRRV-----------------TGCLQNKVVVTI----ACGQMC 216
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 331
+++ GE+Y WG N NG LG+G+ +P RV V +V+CG+
Sbjct: 217 CM--------AVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAA-LQGIRVQRVACGYA 267
Query: 332 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
HT ++ EG++ WG +S GQLG GN + +PT V
Sbjct: 268 HTLVLTDEGQVYAWG------------ANSYGQLGTGNKSNQSYPTPV 303
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 3/132 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG + G++G GS ++ P V + + +ACG + + +TG VY G N G
Sbjct: 176 WGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 235
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ N G P R++ L+ VQ ++ GY H+ +T +G++Y WG NS GQLG G K
Sbjct: 236 QLGLG-NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294
Query: 161 AAKVIPIPTKVE 172
+ + P P VE
Sbjct: 295 SNQSYPTPVTVE 306
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 110/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ L+G K A L + V T
Sbjct: 62 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLNG--KKIACLSYGSGPHIVLATTE 117
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSL---- 165
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 166 --------------------------VLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG A+ + G++ WG+ G+ GQLG GN +
Sbjct: 200 GCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLGLGNSGNQPT 247
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTD 274
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLG 104
QLG
Sbjct: 288 QLG 290
>gi|18076889|emb|CAC86115.1| retinitis pigmentosa GTPase regulator [Mus musculus]
Length = 1001
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 170/385 (44%), Gaps = 57/385 (14%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 28 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 85
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 86 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 145
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G + G+
Sbjct: 146 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 201
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E +L RS P+ + + +++A G
Sbjct: 202 SAFVTMDGELYTFGEPENGKLGLPSE--LLMNHRS-----PQRVLGIPERVIQVACGG-- 252
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVL 308
G + ++ V Y +G + G LG+G+
Sbjct: 253 --------GHTVVLTEKVV----------------------YAFGLGQFGQLGLGTFLFE 282
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
S ++ + + +SCG HTA ++E G + T+G G HG LG
Sbjct: 283 TSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG-DGRHGKLG---------LGME 332
Query: 368 NDVDYIHPTIVNFGENVKALQVSCG 392
N + PT+ + ++CG
Sbjct: 333 NFTNQFFPTLCSNFLRFAVQLIACG 357
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 158/340 (46%), Gaps = 57/340 (16%)
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
+ +TG V+ FG+ +ENI P + + +S G H++ +T + +L
Sbjct: 7 LVPDTGAVFT-----FGKTKFAENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKL 56
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
YM+G N+ GQLGLG KAA I PT ++ L K AA G ++ T G V + G
Sbjct: 57 YMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGN 114
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LG G F + +TP +K +AG SA + E+G+++++GD
Sbjct: 115 NEGQLGLGDTDDRDTFHQIVF-FTP-------ADTIKQLSAGANTSAALTEDGKLFMWGD 166
Query: 265 RAVDKMLFQEGNHARRPSLIS--------------------GGELYTWGSNENGCLGIGS 304
+ ++ ++ ++ P ++ GELYT+G ENG LG+ S
Sbjct: 167 NSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPS 226
Query: 305 IDVLH--SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
+++ SP+RV G E V QV+CG HT ++E + +G G G
Sbjct: 227 ELLMNHRSPQRVLG-IPER-VIQVACGGGHTVVLTEKVVYAFGLG------------QFG 272
Query: 363 QLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QLG G + + P I+ ++ K +SCG NHT + E
Sbjct: 273 QLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 312
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 51/245 (20%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E + VTG K+ +G+ G+LG G +++I+ P IK L+ KVK+AA
Sbjct: 43 GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAA 93
Query: 245 AGFLHSACIDENGRVYIFG-------------DRAV--DKMLFQEGNHARRPS------- 282
G H+ + G VY G DR + F + ++ S
Sbjct: 94 CGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSA 153
Query: 283 -LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 340
L G+L+ WG N G +G+ + P V P+ +SCG+ H+A ++ +G+
Sbjct: 154 ALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT---VGKPISWISCGYYHSAFVTMDGE 210
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHTGA 398
+ T+G G+LG +++ H P V G + +QV+CG HT
Sbjct: 211 LYTFG------------EPENGKLGLPSELLMNHRSPQRV-LGIPERVIQVACGGGHTVV 257
Query: 399 LLEYV 403
L E V
Sbjct: 258 LTEKV 262
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 319 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 364
>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
trifallax]
Length = 685
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 115/451 (25%), Positives = 176/451 (39%), Gaps = 115/451 (25%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G YG LGLG ++ R P F++ ++ +A G H LT G V G N G
Sbjct: 43 VFGQNSYGELGLGDVQERSIPSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGFNGSG 102
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQIST--GYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG N S P +I LK + IS+ G + + I+ DG+LY G N+ GQLG G
Sbjct: 103 QLGHGNNKSIST-PKKIESLKNIRITHISSANGCENLAIISQDGKLYTCGYNNYGQLGHG 161
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK--------VLSWGAGGSGRLG 210
++ + PT V+ L + + S+ VT + V S G +G+L
Sbjct: 162 TQSN--LSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRNDNGQL- 218
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
GQE + E TP++I+ L +V A G HS + +G V+ G ++
Sbjct: 219 -GQE-------HTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQL 270
Query: 271 LFQEGNHARRPSLISG----------------------GELYTWGSNENGCLGI------ 302
+ +P LI GE+Y +G N+ G LGI
Sbjct: 271 GHNDTKSRNQPVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQLGIETNGQA 330
Query: 303 --------------------GSIDVLHSPERVQGPFSES--------------------- 321
G+ + LHS + P S+S
Sbjct: 331 LIQPKQIQEFLTVSNIQHSGGNQNQLHSGQEHNQPSSQSLGESGAIMQGLAESNNLNNQQ 390
Query: 322 ----------PVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+ +++CG H+ A+ E G++ T+G G GQLG GN
Sbjct: 391 PQVQYLSKKVNISKIACGCYHSIALCESGQLFTFGRGNH------------GQLGQGNTE 438
Query: 371 DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
D P V + K + ++ GF HT L++
Sbjct: 439 DQKLPKQVASLHDKKVIGIAGGFYHTIVLVK 469
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 110/255 (43%), Gaps = 47/255 (18%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++++G+NS G+LGLG + IP++V + Q A G E +T G VL+ G
Sbjct: 41 VFVFGQNSYGELGLGDVQER--SIPSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGF 98
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFLHSACIDENGRVYI 261
GSG+LGHG SI TP+ I+ L+ +++ +A G + A I ++G+
Sbjct: 99 NGSGQLGHGNNKSI---------STPKKIESLKNIRITHISSANGCENLAIISQDGK--- 146
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
LYT G N G LG G+ L +P VQ ++
Sbjct: 147 ---------------------------LYTCGYNNYGQLGHGTQSNLSTPTLVQA-LKDT 178
Query: 322 PVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
V VSC + H+ +++ T G + GQLG + I P I+
Sbjct: 179 QVTNVSCSYYHSLIVTQD---MRQASNQQTTVYSVGRNDNGQLGQEHTCHEITPKIIRSL 235
Query: 382 ENVKALQVSCGFNHT 396
+ +Q +CG +H+
Sbjct: 236 NTRQVIQTACGLHHS 250
>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
Length = 363
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 157/347 (45%), Gaps = 55/347 (15%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
L+CG H+ +T G +Y G ND+GQLG Y+ +P + LK E V ++ G +H
Sbjct: 40 LSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYT-KPSVVKKLKPEKVYMVACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A T G LY +G +GQLG G A+ +P +E L K A G + S A+T
Sbjct: 99 TIAATESGHLYSFGCGGDGQLGHGD--AEDSHVPKIIEGLDVQKYKHLACGSDFSAAITE 156
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G++ +WG+ G G+ G G+++ I RL L G KV++ + G+ H A +
Sbjct: 157 NGELYTWGSCGEGQNGLGEDTEI----------PTRL--HLHG-KVRMVSCGYYHMAVVT 203
Query: 255 ENGRVYIFGD----------------------RAVDKMLFQEGNHARRPSLIS-GGELYT 291
E+G +Y+ G+ ++++ + A ++++ G +YT
Sbjct: 204 EDGSLYMCGEKEGGKLGLDHEQLDNTSQLQKIKSIEDQVVVAACGAEFTAVVTKNGSVYT 263
Query: 292 WGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSH 350
+G G LG+G S+ PER+ F + VSCG TA I++ H
Sbjct: 264 FGQGNQGQLGLGSSMMETEFPERIP-LFEKVKARTVSCGESFTAVITK-----------H 311
Query: 351 GTFSEDGHSSGGQLGHGNDV--DYIHPTIVNFGENVKALQVSCGFNH 395
G G G+LG G++ + P V N V+CG H
Sbjct: 312 GNLYTFGDGRHGKLGLGDECFSNTFKPEKVKRFNNFTVKMVTCGGCH 358
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 144/316 (45%), Gaps = 42/316 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G D+G+LG G+ +S +P V + + +ACG HT+ TE+G +Y+ G GQ
Sbjct: 59 FGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGRNHTIAATESGHLYSFGCGGDGQ 118
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + S P I GL ++ ++ G S+AIT +GELY WG GQ GLG+
Sbjct: 119 LGHGDAED-SHVPKIIEGLDVQKYKHLACGSDFSAAITENGELYTWGSCGEGQNGLGEDT 177
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
IPT++ + + + G+ VT G + G G+LG E L
Sbjct: 178 ----EIPTRLHLHGKV--RMVSCGYYHMAVVTEDGSLYMCGEKEGGKLGLDHEQ-----L 226
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD---------------RA 266
+TS+ + IK +E +V +AA G +A + +NG VY FG
Sbjct: 227 DNTSQL--QKIKSIED-QVVVAACGAEFTAVVTKNGSVYTFGQGNQGQLGLGSSMMETEF 283
Query: 267 VDKMLFQEGNHARRPS--------LISGGELYTWGSNENGCLGIGS--IDVLHSPERVQG 316
+++ E AR S + G LYT+G +G LG+G PE+V+
Sbjct: 284 PERIPLFEKVKARTVSCGESFTAVITKHGNLYTFGDGRHGKLGLGDECFSNTFKPEKVK- 342
Query: 317 PFSESPVDQVSCGWKH 332
F+ V V+CG H
Sbjct: 343 RFNNFTVKMVTCGGCH 358
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 131/298 (43%), Gaps = 43/298 (14%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
VV +S G HS+ +T +G+LY +G N GQLG G K P+ V+ L A
Sbjct: 37 VVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGN--TKSYTKPSVVKKLKPEKVYMVAC 94
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G ++A T G + S+G GG G+LGHG + + P++I+ L+ K K A
Sbjct: 95 GRNHTIAATESGHLYSFGCGGDGQLGHGD---------AEDSHVPKIIEGLDVQKYKHLA 145
Query: 245 AGFLHSACIDENGRVYIFG-----------DRAVDKMLFQEGN-------HARRPSLISG 286
G SA I ENG +Y +G D + L G + +
Sbjct: 146 CGSDFSAAITENGELYTWGSCGEGQNGLGEDTEIPTRLHLHGKVRMVSCGYYHMAVVTED 205
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 345
G LY G E G LG+ + ++ + + E V +CG + TA +++ G + T+G
Sbjct: 206 GSLYMCGEKEGGKLGLDHEQLDNTSQLQKIKSIEDQVVVAACGAEFTAVVTKNGSVYTFG 265
Query: 346 WGGSHGTFSEDGHSSGGQLGHGND-VDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 402
G GQLG G+ ++ P + E VKA VSCG + T + ++
Sbjct: 266 QGNQ------------GQLGLGSSMMETEFPERIPLFEKVKARTVSCGESFTAVITKH 311
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 320 ESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
+ V +SCG +H+A ++ GK+ T+G + GQLGHGN Y P++V
Sbjct: 34 DDAVVNLSCGDEHSAVVTANGKLYTFGC------------NDWGQLGHGNTKSYTKPSVV 81
Query: 379 NFGENVKALQVSCGFNHTGALLE 401
+ K V+CG NHT A E
Sbjct: 82 KKLKPEKVYMVACGRNHTIAATE 104
>gi|79295482|ref|NP_001030623.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
gi|332640300|gb|AEE73821.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
Length = 310
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 144/355 (40%), Gaps = 65/355 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LG+G+ E + V A E +S++++ G ++L + + G ++ G N G
Sbjct: 10 WGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGT 69
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
LG P R+ L ++ Q + G H A+ G Y WG N GQ G
Sbjct: 70 LGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLK 129
Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
+G+ + I IP + C + +Q A G SV +T G V +WG +
Sbjct: 130 DEMGRPVRRDIVIPKR--CAPKLTVRQVAAGGTHSVVLTREGHVWTWG-----------Q 176
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
G ++ S P ++ LE V++ A G H+ ++E+GR
Sbjct: 177 PWPPGDIKQIS--VPVRVQGLE--NVRLIAVGAFHNLALEEDGR---------------- 216
Query: 275 GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
L WG+NE G LG G P VQG + VD + GW TA
Sbjct: 217 --------------LLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTA 262
Query: 335 AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 389
+G++ WG G HG LG + + P VN +QV
Sbjct: 263 LTDKGEVYGWG-RGEHGRLG---------LGDNDKSSKMVPQKVNLLAEEDIIQV 307
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 112/288 (38%), Gaps = 59/288 (20%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+ WG +GQLG+G K VE L + G S+A+ G + +WG
Sbjct: 7 IIAWGSGEDGQLGIGTNEEK--EWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGW 64
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G LGH E+ +E P +K L VK+ AA G H +D+ GR Y +G
Sbjct: 65 NQRGTLGHQPETK--------TENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWG 116
Query: 264 DRAV-----DKMLFQEGNHARRPSLISG------------------------GELYTWGS 294
+ + + G RR +I G ++TWG
Sbjct: 117 GNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQ 176
Query: 295 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTF 353
G I + P RVQG + V ++ G H A+ E G++L WG
Sbjct: 177 P----WPPGDIKQISVPVRVQGLEN---VRLIAVGAFHNLALEEDGRLLAWG-------- 221
Query: 354 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
++ GQLG G+ HP V +++ + ++ G H+ AL +
Sbjct: 222 ----NNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTD 265
>gi|71027837|ref|XP_763562.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350515|gb|EAN31279.1| hypothetical protein TP03_0534 [Theileria parva]
Length = 1060
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 120/407 (29%), Positives = 175/407 (42%), Gaps = 97/407 (23%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLT-------ETGCVYA 94
WG + LG G + + P V F + ++CG H+ L G V+
Sbjct: 61 WGKVPFNCLGQGVEVNTSEFPRVIPFFSGRRVTQVSCGDYHSAVLVCSSRENINAGTVFT 120
Query: 95 TGLNDFGQLG---------ISENIGYS-----------LEPLRIS-GLKKEVVQISTGYH 133
GL + G+LG IS+ IG +P+ +S GL+ VV IS G +
Sbjct: 121 FGLGNSGRLGYHIDTNSEIISQQIGTDDKDEPSWCTPVPQPVGMSIGLRNNVVTISCGAN 180
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H+ T DG LY WG ++G LG G A + IP+ KV F + A G S+A+
Sbjct: 181 HTLVTTADGYLYAWGVGAHGVLGNGSVANRYIPV--KVIFPQDTFISKCAAGARHSMALD 238
Query: 194 GGGKVLSWGAGG-----------SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
G + SWG GG +GRLG LG RS +TP LI+ + +V
Sbjct: 239 IKGNIWSWGYGGIVHSIFHIIHRNGRLG-------LGSTRSC--FTPNLIEIFDTYEVFQ 289
Query: 243 AAAGFLHSACIDENGRVYIFG-------------DRAVDKMLFQ--EGNHARRPS----- 282
+ G HSAC+D G VY +G ++ + Q +G H + S
Sbjct: 290 ISCGDSHSACLDRFGTVYTWGSCRGGKLGLGNILSDVLEPTIVQSLKGIHIIQVSCGSGN 349
Query: 283 ---LISGGELYTWGSN---ENGCLGIGSIDVLHSPERVQGPFSESPVDQ--VSCGWKHTA 334
L S G++Y WGS G+ S ++SPE P +E+ V+ G A
Sbjct: 350 TLALSSSGKIYQWGSTLGFNKQTDGLIS-HTVYSPE----PVAETGFKNIFVTSGPYSFA 404
Query: 335 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
AI+ G +LTWG G +G +LGHG+ D++ P V++
Sbjct: 405 AINIFGDLLTWGLG------------TGYRLGHGDSKDHVIPKFVSY 439
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 155/368 (42%), Gaps = 55/368 (14%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
GRLGLGS S + P + F+ + + ++CG +H+ L G VY G G+LG+
Sbjct: 263 GRLGLGSTRSCFTPNLIEIFDTYEVFQISCGDSHSACLDRFGTVYTWGSCRGGKLGLGNI 322
Query: 109 IGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI-- 165
+ LEP + LK ++Q+S G ++ A++ G++Y WG LG K+ +I
Sbjct: 323 LSDVLEPTIVQSLKGIHIIQVSCGSGNTLALSSSGKIYQWGST----LGFNKQTDGLISH 378
Query: 166 ----PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS----- 216
P P IF F A+ G +L+WG G RLGHG
Sbjct: 379 TVYSPEPVAETGFKNIFVTSGPYSF---AAINIFGDLLTWGLGTGYRLGHGDSKDHVIPK 435
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ +LR T Y L+K + K+ V + +R + ++ + +
Sbjct: 436 FVSYLR-TRVYIDNLLKTYDEAAFKVEDT---------VEKTVNPYDERRIQQIAVGDAH 485
Query: 277 HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF----SESPVDQVSCGWKH 332
A L G +YTWG+N G G E P S + +++CG H
Sbjct: 486 GAL---LTCNGTVYTWGANN----GTGCNSTTEPLENYCEPILFNHFSSKITKIACGSSH 538
Query: 333 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 391
T A++ G + +W G + GQLGHG+ + P V+ EN + V
Sbjct: 539 TLAVTINGLLFSW------------GSNESGQLGHGDLRSRVVPDSVSNIEN--CINVFA 584
Query: 392 GFNHTGAL 399
G +++G +
Sbjct: 585 GIDNSGCI 592
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 133/322 (41%), Gaps = 67/322 (20%)
Query: 66 SAFEKHSLKALACGGAHTLFLTETGCVYATGLND-FGQLGISENIGYSLEPLRISGLKKE 124
+ +++ ++ +A G AH LT G VY G N+ G +E + EP+ + +
Sbjct: 469 NPYDERRIQQIAVGDAHGALLTCNGTVYTWGANNGTGCNSTTEPLENYCEPILFNHFSSK 528
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP-----IPTKVECLSGIFT 179
+ +I+ G H+ A+T++G L+ WG N +GQLG G ++V+P I + +GI
Sbjct: 529 ITKIACGSSHTLAVTINGLLFSWGSNESGQLGHGDLRSRVVPDSVSNIENCINVFAGIDN 588
Query: 180 KQAALGF-EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
+++ G + +G+ G+LG G+ +++ TPR E+
Sbjct: 589 SGCICSVSHENMMKDEYGTLWVFGSSTCGKLGLGEN-------MTSAVMTPR---EVNIT 638
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENG 298
V A G +HS +L S G LY G+ G
Sbjct: 639 GVHSVALGPMHSL------------------------------ALTSDGTLYAAGAGSGG 668
Query: 299 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG-GSHGTFSEDG 357
LG G+ + +V+ ++ V G H+ AIS L +GWG G + TF E
Sbjct: 669 RLGTGNTTNSFTFVQVK---TDHKFVAVGAGASHSLAISMENDL-YGWGEGKYLTFDE-- 722
Query: 358 HSSGGQLGHGNDVDYIHPTIVN 379
D + PTI+N
Sbjct: 723 -------------DVLEPTIIN 731
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 123/305 (40%), Gaps = 69/305 (22%)
Query: 123 KEVVQISTGYHHSSAITVD-------GELYMWGKNSNGQLGLGKKAAKVI---------- 165
+ V Q+S G +HS+ + G ++ +G ++G+LG I
Sbjct: 90 RRVTQVSCGDYHSAVLVCSSRENINAGTVFTFGLGNSGRLGYHIDTNSEIISQQIGTDDK 149
Query: 166 -------PIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
P+P V G+ + G ++ T G + +WG G G LG+G ++
Sbjct: 150 DEPSWCTPVPQPVGMSIGLRNNVVTISCGANHTLVTTADGYLYAWGVGAHGVLGNGSVAN 209
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
Y P + + + AAG HS +D G ++ +G + +F
Sbjct: 210 ---------RYIPVKVIFPQDTFISKCAAGARHSMALDIKGNIWSWGYGGIVHSIFH--- 257
Query: 277 HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 336
+I + NG LG+GS +P ++ F V Q+SCG H+A +
Sbjct: 258 ------II----------HRNGRLGLGSTRSCFTPNLIE-IFDTYEVFQISCGDSHSACL 300
Query: 337 SE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFN 394
G + TWG GG+LG GN + D + PTIV + + +QVSCG
Sbjct: 301 DRFGTVYTWG------------SCRGGKLGLGNILSDVLEPTIVQSLKGIHIIQVSCGSG 348
Query: 395 HTGAL 399
+T AL
Sbjct: 349 NTLAL 353
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 104/257 (40%), Gaps = 61/257 (23%)
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI--- 253
VLSWG LG G E + TSE+ PR+I G +V + G HSA +
Sbjct: 57 NVLSWGKVPFNCLGQGVEVN-------TSEF-PRVIPFFSGRRVTQVSCGDYHSAVLVCS 108
Query: 254 -DEN---GRVYIFG-----------DRAVDKMLFQEGNHAR-RPS--------------- 282
EN G V+ FG D + + Q G + PS
Sbjct: 109 SRENINAGTVFTFGLGNSGRLGYHIDTNSEIISQQIGTDDKDEPSWCTPVPQPVGMSIGL 168
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
+ G LY WG +G LG GS+ + P +V P ++ + +
Sbjct: 169 RNNVVTISCGANHTLVTTADGYLYAWGVGAHGVLGNGSVANRYIPVKVIFP-QDTFISKC 227
Query: 327 SCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 385
+ G +H+ A+ +G I +WG+GG + H +G +LG G+ P ++ + +
Sbjct: 228 AAGARHSMALDIKGNIWSWGYGGIVHSIFHIIHRNG-RLGLGSTRSCFTPNLIEIFDTYE 286
Query: 386 ALQVSCGFNHTGALLEY 402
Q+SCG +H+ L +
Sbjct: 287 VFQISCGDSHSACLDRF 303
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 136/360 (37%), Gaps = 64/360 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA--------CGGAH-TLFLTETGCVY 93
WG+ + G+LG G L SR P S E + + A C +H + E G ++
Sbjct: 551 WGSNESGQLGHGDLRSRVVPDSVSNIE-NCINVFAGIDNSGCICSVSHENMMKDEYGTLW 609
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G + G+LG+ EN+ ++ R + V ++ G HS A+T DG LY G S G
Sbjct: 610 VFGSSTCGKLGLGENMTSAVMTPREVNITG-VHSVALGPMHSLALTSDGTLYAAGAGSGG 668
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+LG G + K + F A G S+A++ + WG G
Sbjct: 669 RLGTGNTTNSFTFVQVKTD---HKFVAVGA-GASHSLAISMENDLYGWGEG--------- 715
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL----HSACIDENGRVYIFGDRAVDK 269
L F E P +I + + HS + ++G + FGD + +
Sbjct: 716 --KYLTFDEDVLE--PTIINTIPSTTGQAKVVALAVAANHSLVLSQSGNLSGFGDNSYGQ 771
Query: 270 ------MLFQEGNHARRPSLIS--------------------GGELYTWGSNENGCLGIG 303
M N + P ++ GG+ ++WG ++ LGIG
Sbjct: 772 LGVFLSMKSSANNFIKMPLPVNVQGNIVCVATSRYFSSCSNLGGDAFSWGLAKDHRLGIG 831
Query: 304 SI--DVLHSPERVQGP-FSESPVDQVSC-GWKHTAAISEGKILTWGWGGSHGTFSEDGHS 359
+++ P + +D+ +KHT+ IL + H +S D HS
Sbjct: 832 ETKSKIIYKPTPIANTSMIGDLMDKFELDSYKHTSMSGYETILNYFLDELH--YSSDPHS 889
>gi|345325025|ref|XP_001513851.2| PREDICTED: RCC1 and BTB domain-containing protein 1
[Ornithorhynchus anatinus]
Length = 531
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 130/301 (43%), Gaps = 49/301 (16%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTIVPKKLELLSGKKIKSLSYGSGPHVLLSTEDGIVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P++I + K+V +++ G HHS A+ DGE+Y WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQICTNLMIKQVTEVACGSHHSMALADDGEVYAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG 286
TP + L V V G+ H+ +L
Sbjct: 223 -TPCRVAALHSVCVLQIVCGYAHTL------------------------------ALTDE 251
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTW 344
G LY WG+N G LG G+ L SP ++ E V+ +C HT+A G + W
Sbjct: 252 GLLYAWGANTYGQLGTGNKSNLLSPAQIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMW 310
Query: 345 G 345
G
Sbjct: 311 G 311
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 117/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ +C+ + +ACG H++ L + G VYA G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQICTNLMIKQVTEVACGSHHSMALADDGEVYAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +V L + Q G+ ++A+T G + +WGA G+LG G +S++L
Sbjct: 218 NGNQLTP--CRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAQIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 138/312 (44%), Gaps = 51/312 (16%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSANEAIYVTHSDEVFVFGVNCSNCLGTGDNQSTI--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
LSG K + G V + T G V +WG G +LG+G + + ++ T +
Sbjct: 70 LLSGKKIKSLSYGSGPHVLLSTEDGIVYAWGHNGYSQLGNGTTNQGIAPIQIC---TNLM 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V A G HS + ++G VY +G ++ G+ A +P+
Sbjct: 127 IKQVTEV-----ACGSHHSMALADDGEVYAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV S V Q+
Sbjct: 180 IKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHSVC-VLQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG ++ GQLG GN + + P + +
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKSNLLSPAQIMVEKERVV 287
Query: 387 LQVSCGFNHTGA 398
+C HT A
Sbjct: 288 EIAACHSAHTSA 299
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P +I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKSNLLSPAQIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ +P T C +F
Sbjct: 317 -SVTLPHLTHFSCTDDVF 333
>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
CCMP2712]
Length = 355
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 150/364 (41%), Gaps = 41/364 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPV----VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
WG YG+LGLG + P + + +++++ G +H+ + E G VY G
Sbjct: 4 WGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVYTWGRG 63
Query: 99 DFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQLG LEP + ++ ++ G +H+ +T +G +Y WG+N GQLG
Sbjct: 64 WEGQLGHDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWGENKAGQLGT 123
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P+ L+ A G +VA+ G + SWG G+LGHG +
Sbjct: 124 GDLKSSNSPVLID-SALNLPSVLSIACGEFHTVAICIEGTIWSWGRNQCGQLGHGNTKTC 182
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV--------DK 269
Y P + + AA G H+ + + ++Y +G A DK
Sbjct: 183 ---------YFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQLGLNRSDK 233
Query: 270 MLFQEG--NHARRP-------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
+ Q +H RR +L+ ++YTWG N+ G LG+G PE V
Sbjct: 234 AVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQLGLGHYTHSPVPELV 293
Query: 315 QGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
V Q++CG+ H A ++ G +S G GQLGH +
Sbjct: 294 TA-LRSVRVQQIACGYDHCVAFVADEVEP-GMPPLEHVYSW-GRGEEGQLGHNELLSRCT 350
Query: 375 PTIV 378
P IV
Sbjct: 351 PRIV 354
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 96/201 (47%), Gaps = 21/201 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ ++ + P K ACGG HTL LT+ +YA G N +GQ
Sbjct: 166 WGRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQ 225
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG++ + L+P + L++ + GY HS A+ + ++Y WG+N GQLGLG
Sbjct: 226 LGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQLGLGHYT 285
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG---------GKVLSWGAGGSGRLGHG 212
P+P V L + +Q A G++ VA V SWG G G+LGH
Sbjct: 286 HS--PVPELVTALRSVRVQQIACGYDHCVAFVADEVEPGMPPLEHVYSWGRGEEGQLGHN 343
Query: 213 QESSILGFLRSTSEYTPRLIK 233
+ S TPR+++
Sbjct: 344 E---------LLSRCTPRIVE 355
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 125/287 (43%), Gaps = 52/287 (18%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA----LGFEQSVAVTGGGKVL 199
+Y WGKN GQLGLG +P+PT + LS ++ G S + G V
Sbjct: 1 VYSWGKNKYGQLGLGH--TNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVY 58
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
+WG G G+LGH + I E P ++ ++E A G H+ + +NG +
Sbjct: 59 TWGRGWEGQLGHDVVTEI--------ELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLI 110
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISG-----------------------GELYTWGSNE 296
Y +G+ ++ + + P LI G +++WG N+
Sbjct: 111 YTWGENKAGQLGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHTVAICIEGTIWSWGRNQ 170
Query: 297 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWGWGGSHGTFSE 355
G LG G+ + P +V G ++ + +CG +HT +++ KI WG
Sbjct: 171 CGQLGHGNTKTCYFPTQVVG-MAKKICIRAACGGQHTLVLTDANKIYAWG---------- 219
Query: 356 DGHSSGGQLG-HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
++ GQLG + +D + P IV+ A V CG++H+ AL++
Sbjct: 220 --SNAYGQLGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMK 264
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 139/337 (41%), Gaps = 50/337 (14%)
Query: 92 VYATGLNDFGQLGI--SENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMW 147
VY+ G N +GQLG+ + N+ L +S +K V I G HS+ I DG++Y W
Sbjct: 1 VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVYTW 60
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G+ GQLG ++ P V + + A G +V VT G + +WG +G
Sbjct: 61 GRGWEGQLG-HDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWGENKAG 119
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
+LG G L+S++ +P LI L V A G H+ I G ++ +G
Sbjct: 120 QLGTGD-------LKSSN--SPVLIDSALNLPSVLSIACGEFHTVAICIEGTIWSWGRNQ 170
Query: 267 VDKMLFQEGNHARRPSLISG----------------------GELYTWGSNENGCLGIGS 304
++ P+ + G ++Y WGSN G LG+
Sbjct: 171 CGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQLGLNR 230
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWGWGGSHGTFSEDGHSSGGQ 363
D + S V CG+ H+ A+ + +I TW G + GQ
Sbjct: 231 SDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTW------------GRNDCGQ 278
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
LG G+ P +V +V+ Q++CG++H A +
Sbjct: 279 LGLGHYTHSPVPELVTALRSVRVQQIACGYDHCVAFV 315
>gi|403222935|dbj|BAM41066.1| chromosome condensation protein [Theileria orientalis strain
Shintoku]
Length = 2619
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 172/396 (43%), Gaps = 87/396 (21%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-------GCVYA 94
WG + LG G + + P + F + +ACG H+ L + G V+
Sbjct: 1018 WGKVPFNCLGQGVDVSTSEYPKIIPFFSGRKIAQVACGDYHSAVLVSSSKQHPNAGTVFT 1077
Query: 95 TGLNDFGQLG---------ISENIG-----------YSLEPLRIS-GLKKEVVQISTGYH 133
GL + G+LG +S+ IG ++ +P+ +S GL+ +V I+ G +
Sbjct: 1078 FGLGNSGRLGYHIDTNSDVLSQQIGTEDKDEPSWCTHTPQPVGLSIGLRNAIVSIACGAN 1137
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H+ TVDG +Y WG + G LG G A + P+ V IF + G S+A+
Sbjct: 1138 HTLVTTVDGCVYSWGMGAYGVLGTGSVANRYNPVKV-VFPSDNIFISKCCAGSRHSMALD 1196
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G V SWG GG+GRLG G + + YTP LI+ + +V + G HSAC+
Sbjct: 1197 KEGNVWSWGYGGNGRLGLGS---------TRNYYTPNLIRIFDTYEVFQISCGDSHSACL 1247
Query: 254 DENGRVYIFG-----------------DRAVDKMLFQEGNHARRPS--------LISGGE 288
D G VY +G + AV + L +G H + + L + G+
Sbjct: 1248 DRFGTVYTWGCCRGGKLGLGKIVSDVLEPAVVESL--KGTHIIQIACGTGNTLALSASGK 1305
Query: 289 LYTWGS----NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILT 343
+Y WG N+ I +ID + P G F ++ G AAI+ G +LT
Sbjct: 1306 IYQWGCTLGFNKQSEGLISNIDYVPQPVPDTG-FKNV---FIAAGPYSCAAINIFGDLLT 1361
Query: 344 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 379
WG G +G +LGHG+ D++ P V+
Sbjct: 1362 WGLG------------TGYRLGHGDSKDHVAPKFVS 1385
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 165/372 (44%), Gaps = 50/372 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G GRLGLGS + + P + F+ + + ++CG +H+ L G VY G G+
Sbjct: 1204 WGYGGNGRLGLGSTRNYYTPNLIRIFDTYEVFQISCGDSHSACLDRFGTVYTWGCCRGGK 1263
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + + LEP + LK ++QI+ G ++ A++ G++Y WG LG K++
Sbjct: 1264 LGLGKIVSDVLEPAVVESLKGTHIIQIACGTGNTLALSASGKIYQWG----CTLGFNKQS 1319
Query: 162 AKVI------PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+I P P +F A G A+ G +L+WG G RLGHG
Sbjct: 1320 EGLISNIDYVPQPVPDTGFKNVFI---AAGPYSCAAINIFGDLLTWGLGTGYRLGHGDSK 1376
Query: 216 S-----ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
+ LR T Y L+K + +++ + G ++ + ++
Sbjct: 1377 DHVAPKFVSHLR-TRIYIDTLLKVYDETPMELQDNV--------KAGATNAHDEKRIQQI 1427
Query: 271 LFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVL--HSPERVQGPFSESPVDQVSC 328
+G+ L G +YTWG N NG + D + +S + FS S + +++C
Sbjct: 1428 AVGDGHGVL---LTCNGTVYTWGVN-NGTGYNSTKDQIESYSEPMLFNHFS-SKISKIAC 1482
Query: 329 GWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 387
G H+ AI+ G + TWG + GQLG G+ + P V + EN +
Sbjct: 1483 GSNHSLAITVNGLLFTWGC------------NDNGQLGQGDLRSRVIPDHVPYIEN--CI 1528
Query: 388 QVSCGFNHTGAL 399
V G +++G +
Sbjct: 1529 NVFAGVDNSGCI 1540
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 25/237 (10%)
Query: 56 LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG--------ISE 107
+ES P++ + F + +ACG H+L +T G ++ G ND GQLG I +
Sbjct: 1461 IESYSEPMLFNHFSS-KISKIACGSNHSLAITVNGLLFTWGCNDNGQLGQGDLRSRVIPD 1519
Query: 108 NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
++ Y + + I + H G L+++G +S G+LGLG+ +
Sbjct: 1520 HVPYIENCINVFAGVDNSGCICSSNHEDFMKDDYGTLWVFGSSSCGKLGLGEALTSTVMT 1579
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P ++ ++G++ + ALG SV +T G + S GAG GRLG G S+ F +E
Sbjct: 1580 PREITTVTGVY--KLALGTMHSVVLTHEGSLYSAGAGTGGRLGTGDTSNYFVFTPVKTE- 1636
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
VK AG HS I + +Y +G+ K + + H P+L+
Sbjct: 1637 ----------VKFVDVCAGSSHSLAISVDNELYGWGE---GKYICSDEKHVLEPTLM 1680
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 101/253 (39%), Gaps = 71/253 (28%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI---- 253
V SWG LG G + S TSEY P++I G K+ A G HSA +
Sbjct: 1015 VYSWGKVPFNCLGQGVDVS-------TSEY-PKIIPFFSGRKIAQVACGDYHSAVLVSSS 1066
Query: 254 ---DENGRVYIFG-----------DRAVDKMLFQEGN----------HARRP-------- 281
G V+ FG D D + Q G H +P
Sbjct: 1067 KQHPNAGTVFTFGLGNSGRLGYHIDTNSDVLSQQIGTEDKDEPSWCTHTPQPVGLSIGLR 1126
Query: 282 ------------SLIS--GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 327
+L++ G +Y+WG G LG GS+ ++P +V P + +
Sbjct: 1127 NAIVSIACGANHTLVTTVDGCVYSWGMGAYGVLGTGSVANRYNPVKVVFPSDNIFISKCC 1186
Query: 328 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
G +H+ A+ EG + +WG+GG+ G+LG G+ +Y P ++ + +
Sbjct: 1187 AGSRHSMALDKEGNVWSWGYGGN------------GRLGLGSTRNYYTPNLIRIFDTYEV 1234
Query: 387 LQVSCGFNHTGAL 399
Q+SCG +H+ L
Sbjct: 1235 FQISCGDSHSACL 1247
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 5/140 (3%)
Query: 43 WGNGDY-GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G Y LE V+ S + + + G H+L LT +G V A G N +G
Sbjct: 1661 WGEGKYICSDEKHVLEPTLMEVIPSPTGEAKVISAVAAGNHSLVLTNSGYVAAFGNNTYG 1720
Query: 102 QLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG+ +I S ++ L V I+T + SS T+ G+ Y WG +S+ +LG+
Sbjct: 1721 QLGVQLSIKSSANNFIKMPSTVNLDANVTCIATSRYFSSCSTLKGDAYSWGLSSDDRLGV 1780
Query: 158 GKKAAKVIPIPTKVECLSGI 177
G KV+ PT + S I
Sbjct: 1781 GFTNNKVVYAPTTIVNTSMI 1800
>gi|198415420|ref|XP_002129368.1| PREDICTED: similar to regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1 [Ciona
intestinalis]
Length = 554
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 116/235 (49%), Gaps = 14/235 (5%)
Query: 31 ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTET 89
I +TL + +L G G LG+G S P + +F + +L+ G G H L LT+
Sbjct: 59 IFTTLDEKVYSL-GTNTSGCLGVGDNSSSLEPRLLESFSGQKIISLSAGSGPHVLVLTQD 117
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
G VY+ G N + QLG + L + +VVQI+ G HHS A+T +GE+Y WG
Sbjct: 118 GGVYSWGHNSYMQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHSMALTTEGEVYTWGY 177
Query: 150 NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
N+ GQ+G G A + P KV C+ G S+ VT G+V SWG G+G+
Sbjct: 178 NNCGQIGSGSTANQ--GSPRKVTACIGNKRIIDITCGQTTSLCVTDSGEVYSWGYNGNGQ 235
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
LG G + ++ P + L+GV + G+ H+ + +NG V+ +G
Sbjct: 236 LGVG---------NNVNQTNPCRVAALQGVVIAQVVCGYAHALALTDNGVVFGWG 281
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 116/243 (47%), Gaps = 21/243 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ Y +LG G P + S + + +ACG H++ LT G VY G N+ GQ
Sbjct: 123 WGHNSYMQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHSMALTTEGEVYTWGYNNCGQ 182
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+G S + P +++ K ++ I+ G S +T GE+Y WG N NGQLG+G
Sbjct: 183 IG-SGSTANQGSPRKVTACIGNKRIIDITCGQTTSLCVTDSGEVYSWGYNGNGQLGVGNN 241
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +V L G+ Q G+ ++A+T G V WGA G+LG G +++
Sbjct: 242 VNQTNP--CRVAALQGVVIAQVVCGYAHALALTDNGVVFGWGANSYGQLGSGNKANTC-- 297
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
TP + G V +AA + H SA +++G +Y++G L Q+
Sbjct: 298 -------TPLQVATRIGRVVCLAATHYSHSSAARNQSGHIYMWGQ------LRQQATPEP 344
Query: 280 RPS 282
+P+
Sbjct: 345 KPT 347
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 127/301 (42%), Gaps = 55/301 (18%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSA 137
+F T VY+ G N G LG+ +N SLEP + ++++ +S G H
Sbjct: 55 ATEVIFTTLDEKVYSLGTNTSGCLGVGDN-SSSLEPRLLESFSGQKIISLSAGSGPHVLV 113
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+T DG +Y WG NS QLG G + P + + Q A G S+A+T G+
Sbjct: 114 LTQDGGVYSWGHNSYMQLGNGGTSPGTSPSLLSRNISNKVV--QIACGSHHSMALTTEGE 171
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V +WG G++G G + ++ +PR + +ACI
Sbjct: 172 VYTWGYNNCGQIGSGS---------TANQGSPRKV-----------------TACIG--- 202
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
R +D Q + GE+Y+WG N NG LG+G+ +P RV
Sbjct: 203 -----NKRIIDITCGQ----TTSLCVTDSGEVYSWGYNGNGQLGVGNNVNQTNPCRV-AA 252
Query: 318 FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 377
+ QV CG+ H A+++ ++ +GWG +S GQLG GN + P
Sbjct: 253 LQGVVIAQVVCGYAHALALTDNGVV-FGWGA----------NSYGQLGSGNKANTCTPLQ 301
Query: 378 V 378
V
Sbjct: 302 V 302
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 112/266 (42%), Gaps = 57/266 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG--IFTKQAALGFEQSVAVTGGG 196
T+D ++Y G N++G LG+G ++ + P +E SG I + A G + +T G
Sbjct: 62 TLDEKVYSLGTNTSGCLGVGDNSSSLEP--RLLESFSGQKIISLSAGSG-PHVLVLTQDG 118
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
V SWG +LG+G S +P L+ KV A G HS
Sbjct: 119 GVYSWGHNSYMQLGNGGTSP---------GTSPSLLSRNISNKVVQIACGSHHSM----- 164
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
+L + GE+YTWG N G +G GS SP +V
Sbjct: 165 -------------------------ALTTEGEVYTWGYNNCGQIGSGSTANQGSPRKVTA 199
Query: 317 PFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
+ ++CG + +++ G++ +WG+ G+ GQLG GN+V+ +P
Sbjct: 200 CIGNKRIIDITCGQTTSLCVTDSGEVYSWGYNGN------------GQLGVGNNVNQTNP 247
Query: 376 TIVNFGENVKALQVSCGFNHTGALLE 401
V + V QV CG+ H AL +
Sbjct: 248 CRVAALQGVVIAQVVCGYAHALALTD 273
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG+G+ ++ P +A + + + CG AH L LT+ G V+ G N +GQ
Sbjct: 228 WGYNGNGQLGVGNNVNQTNPCRVAALQGVVIAQVVCGYAHALALTDNGVVFGWGANSYGQ 287
Query: 103 LGISENIGYSLEPLRISGLKKEVVQI-STGYHHSSAI-TVDGELYMWGKNSNGQLGLGKK 160
LG S N + PL+++ VV + +T Y HSSA G +YMW GQL ++
Sbjct: 288 LG-SGNKANTCTPLQVATRIGRVVCLAATHYSHSSAARNQSGHIYMW-----GQL---RQ 338
Query: 161 AAKVIPIPTKVECLSGIF 178
A P PT L+ +F
Sbjct: 339 QATPEPKPTNFTDLNAVF 356
>gi|323450026|gb|EGB05910.1| hypothetical protein AURANDRAFT_66097 [Aureococcus anophagefferens]
Length = 1340
Score = 104 bits (260), Expect = 8e-20, Method: Composition-based stats.
Identities = 81/225 (36%), Positives = 116/225 (51%), Gaps = 14/225 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+G G+LG G ES P A + A++CG H+L LT+ G YA G G+
Sbjct: 153 FGHGGCGQLGHGDQESSATPRRVDALAGAFVVAVSCGQQHSLALTDRGAPYAFGSGFGGK 212
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + SL P R++G+ + V ++ G HHS A T G +Y +G N + QLGL ++
Sbjct: 213 TGLGDQRSRSL-PRRVAGIPEPVAVLTAGAHHSLAATTSGAVYAFGSNVHLQLGLPERGD 271
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL--GF 220
P +V+ L G Q + G S+AV G SWGA G GR + +S++ GF
Sbjct: 272 AYAP--RRVDALDGRVV-QLSGGEHHSLAVDAAGACYSWGA-GEGR----ERTSVMVGGF 323
Query: 221 L--RSTSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
L RS + PR ++ L GV+ AAG LHS + G VY F
Sbjct: 324 LGHRSLDDAARPRRVEGLAGVRAVDCAAGALHSLVLSAAGDVYSF 368
Score = 78.6 bits (192), Expect = 5e-12, Method: Composition-based stats.
Identities = 79/302 (26%), Positives = 128/302 (42%), Gaps = 44/302 (14%)
Query: 67 AFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEV 125
A E + + +A G +HT+ + G + A G + + + + + + P R+
Sbjct: 72 ARESRARRGVAAGTSHTVVVAHDGTLRACGTDPTRRGFLGQGPVFRVHRPARVPAGGLRF 131
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
+ ++T H+ A+T GE+Y +G GQLG G + + P +V+ L+G F + G
Sbjct: 132 ISVATHSFHTLALTASGEVYSFGHGGCGQLGHGDQESSA--TPRRVDALAGAFVVAVSCG 189
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+ S+A+T G ++G+G G+ G G + S RS PR + + V + A
Sbjct: 190 QQHSLALTDRGAPYAFGSGFGGKTGLGDQRS-----RS----LPRRVAGIPE-PVAVLTA 239
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI----------SGGE------- 288
G HS +G VY FG ++ E A P + SGGE
Sbjct: 240 GAHHSLAATTSGAVYAFGSNVHLQLGLPERGDAYAPRRVDALDGRVVQLSGGEHHSLAVD 299
Query: 289 ----LYTWGSNE---------NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
Y+WG+ E G LG S+D P RV+G VD + G H+
Sbjct: 300 AAGACYSWGAGEGRERTSVMVGGFLGHRSLDDAARPRRVEGLAGVRAVD-CAAGALHSLV 358
Query: 336 IS 337
+S
Sbjct: 359 LS 360
>gi|221485260|gb|EEE23541.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii GT1]
Length = 1205
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 169/390 (43%), Gaps = 53/390 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVC-------SAFEKHSL------------KALACGGAHT 83
WG G YG LG G + PV S +K ++ + G H+
Sbjct: 205 WGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHS 264
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDG 142
+ T G ++ G G+LG+ N G SL P + L +++V ++ G HS+ I G
Sbjct: 265 MACTSDGTLWTWGHGGNGRLGLGHNRG-SLSPAVVDYILDRDIVFVNAGDSHSACIDRQG 323
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
LY WG G+LG G + IP+P KVE G+ Q A G ++A+T G V +WG
Sbjct: 324 VLYTWGSGGFGRLGHGDQGE--IPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWG 381
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
AG + G G++ S G + + P+ + ++E + I AAG HSA + G + ++
Sbjct: 382 AGLALGFGEGEDGS--GGMVA----VPKHLSDIEAAVLNI-AAGPYHSAAVTVGGDLLVW 434
Query: 263 GDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGI-------GSIDVLHSPERVQ 315
G ++ + + P ++ + S+ LG+ +DVL P
Sbjct: 435 GVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSG 494
Query: 316 GPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV--DYI 373
S + + CG HT A++ G W W G + GQLG G DV D
Sbjct: 495 TNQSSWTLQSLECGESHTIALT-GAGAVWVW----------GSNDDGQLGLGEDVEEDQY 543
Query: 374 HPTIVN-FGENVKALQVSCGFNHTGALLEY 402
P + F ++ +++CG H A+ +Y
Sbjct: 544 EPVKLECFSTPIR--RIACGSKHCLAVAQY 571
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 149/339 (43%), Gaps = 80/339 (23%)
Query: 42 LWGNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
+WG+ D G+LGLG E ++ PV F ++ +ACG H L + + G V+A G ND
Sbjct: 523 VWGSNDDGQLGLGEDVEEDQYEPVKLECFST-PIRRIACGSKHCLAVAQYGDVFAWGAND 581
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT-------VDGE-------LY 145
GQLG+ + S EP ++ L ++ V + G +S+ IT V GE L+
Sbjct: 582 NGQLGLGV-VRPSFEPAAVTAL-RQAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLW 639
Query: 146 MWGKNSNGQLGLGKKAAK---------VIPIPT--------------KVECLSGIFTKQA 182
WG +G+LGLG+ A V +P +V C+S F+
Sbjct: 640 AWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVS--FSPLC 697
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
+ G S+A+T G+ +WGAG GRLG G + + YTP +GV+++
Sbjct: 698 S-GTSHSLAITAQGECYAWGAGYYGRLGIGT---------TANAYTPTRCDFPKGVRLRS 747
Query: 243 AAAGFLHSACIDENGRVYIFGDR----------------------AVDKMLFQEGNHARR 280
AAG HS + +G ++ +G R V K+ +
Sbjct: 748 VAAGACHSLALSMDGDLWFWGRREDTCSTTNYMSPRIFMQLEGQGGVPKVKSISASERHS 807
Query: 281 PSLISGGELYTWGSN---ENGCLGIGSIDVLHSPERVQG 316
++ GE++ WG N + GC G + L PERV G
Sbjct: 808 LAVTEAGEVFAWGDNKLYQTGC-GKRQAERLDRPERVAG 845
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 140/300 (46%), Gaps = 30/300 (10%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS-LEPLRISGLKKEVVQIST 130
+L++L CG +HT+ LT G V+ G ND GQLG+ E++ EP+++ + +I+
Sbjct: 501 TLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIRRIAC 560
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGK-----KAAKVIPIPTKVECLSGIFTKQ--AA 183
G H A+ G+++ WG N NGQLGLG + A V + V+ G +
Sbjct: 561 GSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQAVDVFCGDDYSACITS 620
Query: 184 LGFEQSVAVTGG---GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
LG QSV+ G G + +WGA SG+LG G++ + S S TP+ + V
Sbjct: 621 LGGAQSVSGETGTEFGDLWAWGAAESGKLGLGED------VASGSILTPQKVV----FSV 670
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCL 300
+ A L S + RV+ L +H+ ++ + GE Y WG+ G L
Sbjct: 671 PVCACS-LDSLEMQAYKRVFCVSFSP----LCSGTSHSL--AITAQGECYAWGAGYYGRL 723
Query: 301 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 360
GIG+ ++P R P + V+ G H+ A+S L W WG T S + S
Sbjct: 724 GIGTTANAYTPTRCDFP-KGVRLRSVAAGACHSLALSMDGDL-WFWGRREDTCSTTNYMS 781
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 80/170 (47%), Gaps = 1/170 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YGRLG+G+ + + P C + L+++A G H+L L+ G ++ G +
Sbjct: 715 WGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALSMDGDLWFWGRREDTC 774
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+ L G +V IS HS A+T GE++ WG N Q G GK+ A
Sbjct: 775 STTNYMSPRIFMQLEGQGGVPKVKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQA 834
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+ + P +V L + A G + S + G+V + G SGRLG G
Sbjct: 835 ERLDRPERVAGLPSA-CQWVATGPQGSFFILASGEVFAAGVIKSGRLGTG 883
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 150/375 (40%), Gaps = 64/375 (17%)
Query: 68 FEKHSLKALACGGAHTLFLTETG---CVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
F S+K +A G HTL + G ++ G N LG+ I + P + K
Sbjct: 43 FGPASVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKM 102
Query: 125 -VVQISTGYHHSSAITVD-----GELYMWGKNSNGQLGLGKKAAKVI------------- 165
++S G ++S+ + G++Y +G + G+LG K A +
Sbjct: 103 GTFEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQE 162
Query: 166 -------PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
P P++V + + G + ++A++ G + +WG G G LG G S
Sbjct: 163 DGPSWFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSY 222
Query: 219 GFLRST--SEYTPRLIKELEG--------VKVKIAAAGFLHSACIDENGRVYIFG----- 263
+R SE KE G V V +AG HS +G ++ +G
Sbjct: 223 TPVRVYLGSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNG 282
Query: 264 ----------------DRAVDK-MLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSID 306
D +D+ ++F + + G LYTWGS G LG G
Sbjct: 283 RLGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQG 342
Query: 307 VLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLG 365
+ P +V+G F PV QV+CG HT A++ +G + WG G + G F E SGG +
Sbjct: 343 EIPVPRKVEG-FGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALG-FGEGEDGSGGMVA 400
Query: 366 HGNDVDYIHPTIVNF 380
+ I ++N
Sbjct: 401 VPKHLSDIEAAVLNI 415
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 36/138 (26%)
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERV----QGPFSESPVDQVSCGWKHTAAISE----- 338
+L+ WG N + LG+G + ERV FS+ +VSCG ++A + +
Sbjct: 69 QLFGWGKNYSNVLGMG----VEIRERVFPGLVPFFSKMGTFEVSCGTNNSAVLVKRAQQP 124
Query: 339 -GKILTWGWG----------------GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
GK+ T+G G G G FS DG G P+ V F
Sbjct: 125 GGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWFTPK------PSRVRFR 178
Query: 382 ENVKALQVSCGFNHTGAL 399
+ K ++SCG +HT AL
Sbjct: 179 DKCKIARISCGADHTLAL 196
>gi|348685253|gb|EGZ25068.1| hypothetical protein PHYSODRAFT_326137 [Phytophthora sojae]
Length = 5016
Score = 104 bits (259), Expect = 8e-20, Method: Composition-based stats.
Identities = 87/325 (26%), Positives = 139/325 (42%), Gaps = 74/325 (22%)
Query: 43 WGNGDYGRLGLGSLESRWRP------VVCSAFEKHSLKAL-------------ACGGAHT 83
WG+ YG+LGLG SR +P + + + +L+ + ACG AHT
Sbjct: 256 WGSNKYGQLGLGDFSSRTQPEEVHFALATLSSHRRALRVMHTVQHGGNNVTHVACGAAHT 315
Query: 84 LFLTETGCVYATGLNDFGQLGISENI----GY-SLEPLRISGLKKE-VVQISTGYHHSSA 137
LF+T + G N GQLG+ + G+ S P+ + L+ + ++ + G +HS+
Sbjct: 316 LFVTHQQQILGMGYNQAGQLGLGHRLQQYKGWRSCTPITVESLRDQSILDLGAGQNHSAC 375
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL--SGIFTKQAALGFEQSVAVTGG 195
+ +G++Y WG +G+LG GK V +PT + L + I + G ++
Sbjct: 376 VLSNGDVYTWGCGDDGRLGDGKLGEGV-AVPTLIPLLREASIRARTVRCGARHMAVISDS 434
Query: 196 GKVLSWGAGGSGRLG-HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+ WGA G+LG ++ FL + TP L E V+ A G H+ C+
Sbjct: 435 DLLYIWGANDFGQLGCKDRKPRSQPFLLA----TPPLFAE----GVEDVALGEFHTTCV- 485
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSN--ENGCLGIGSIDVLHSPE 312
S G+ YTWG N +N L + H+P+
Sbjct: 486 -----------------------------TSAGKAYTWGLNLRDNSAL----VASHHTPQ 512
Query: 313 RVQGPFSESPVDQVSCGWKHTAAIS 337
+ P E V +VSCGW HT ++
Sbjct: 513 AIDLPEKER-VRKVSCGWTHTDIVT 536
Score = 87.8 bits (216), Expect = 9e-15, Method: Composition-based stats.
Identities = 97/361 (26%), Positives = 143/361 (39%), Gaps = 83/361 (22%)
Query: 94 ATGLNDFGQLG-------------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
A GLN G+LG ++ + + EPL I+ +S G HH + IT
Sbjct: 197 AWGLNSNGELGNGTMTSSPTPQMVVTFPLHFQREPLSIA-------HVSCGKHHVAVITG 249
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIP---------IPTKVECLSGIFTKQ--------AA 183
L+ WG N GQLGLG +++ P + + L + T Q A
Sbjct: 250 QARLFTWGSNKYGQLGLGDFSSRTQPEEVHFALATLSSHRRALRVMHTVQHGGNNVTHVA 309
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G ++ VT ++L G +G+LG G RS TP ++ L +
Sbjct: 310 CGAAHTLFVTHQQQILGMGYNQAGQLGLGHRLQQYKGWRSC---TPITVESLRDQSILDL 366
Query: 244 AAGFLHSACIDENGRVYIFG--------------DRAVDKM--LFQEGN--------HAR 279
AG HSAC+ NG VY +G AV + L +E + AR
Sbjct: 367 GAGQNHSACVLSNGDVYTWGCGDDGRLGDGKLGEGVAVPTLIPLLREASIRARTVRCGAR 426
Query: 280 RPSLISGGE-LYTWGSNENGCLGIGSIDVLHSPERVQGP--FSESPVDQVSCGWKHTAAI 336
++IS + LY WG+N+ G LG P + P F+E V+ V+ G HT +
Sbjct: 427 HMAVISDSDLLYIWGANDFGQLGCKDRKPRSQPFLLATPPLFAEG-VEDVALGEFHTTCV 485
Query: 337 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
S GK TWG + H + P ++ E + +VSCG+ H
Sbjct: 486 TSAGKAYTWGLNLRDNSALVASHHT--------------PQAIDLPEKERVRKVSCGWTH 531
Query: 396 T 396
T
Sbjct: 532 T 532
Score = 44.7 bits (104), Expect = 0.091, Method: Composition-based stats.
Identities = 51/226 (22%), Positives = 81/226 (35%), Gaps = 48/226 (21%)
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
+VA G +L+WG +G LG+G TS TP+++ + +
Sbjct: 186 AVAQPRGTTLLAWGLNSNGELGNGT---------MTSSPTPQMVVTFP-LHFQREPLSIA 235
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG-GELYTWGSNENGCLGIGSIDV 307
H +C G H ++I+G L+TWGSN+ G LG+G
Sbjct: 236 HVSC----------------------GKH--HVAVITGQARLFTWGSNKYGQLGLGDFSS 271
Query: 308 LHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED-------GHSS 360
PE V + + + HT + G +H F G++
Sbjct: 272 RTQPEEVHFALATLSSHRRALRVMHTVQHGGNNVTHVACGAAHTLFVTHQQQILGMGYNQ 331
Query: 361 GGQLGHGNDVDYIH------PTIVNFGENVKALQVSCGFNHTGALL 400
GQLG G+ + P V + L + G NH+ +L
Sbjct: 332 AGQLGLGHRLQQYKGWRSCTPITVESLRDQSILDLGAGQNHSACVL 377
>gi|380012154|ref|XP_003690152.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like,
partial [Apis florea]
Length = 647
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 170/367 (46%), Gaps = 70/367 (19%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ D+G+LGLG +P + + +ACG AHTL T ++A G + G
Sbjct: 48 VFGSNDWGQLGLGHKNHISKPSCVKVLKPEKVTHVACGRAHTLICTVAEKIFACGSDQEG 107
Query: 102 QLG--ISENIGYSLE-PLRI--SGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
QLG IS IG S P+ + SG ++VQI G HHS A+T DG ++ WG N GQL
Sbjct: 108 QLGRGISA-IGDSASIPVLVYDSGPTGSKIVQIVAGSHHSLALTSDGNVFAWGSNLEGQL 166
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
GL + ++ PTKV + KQ G+ S+ +T G V G SG+LG
Sbjct: 167 GLPDISG-LVNKPTKVHIPEPV--KQINTGYYHSIFLTENGLVYVCGESESGKLGID--- 220
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ F +++ P+ ++ + +H AC G V +L ++
Sbjct: 221 --INF---STQIVPKQMQ---------LPSPVIHVAC---------GGHHTV--ILTEKD 255
Query: 276 NHARRPSLISGGELYTWGSNENGCLGIGS-IDVLHSPERV-QGPFSESPVDQVSCGWKHT 333
N LY GSN +G LG+G+ + LH P+ + +G + +SCG HT
Sbjct: 256 N------------LYCTGSNSSGQLGLGTNVTELHIPKLLPRGALKNEKISHISCGESHT 303
Query: 334 AAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL---QV 389
A ++E GK+ T G G H G+LG + + +H + F + K L +
Sbjct: 304 AILTESGKLYTCG-DGRH-----------GKLGLEENENNVHE--LTFVQRYKELFISNI 349
Query: 390 SCGFNHT 396
SCG HT
Sbjct: 350 SCGGCHT 356
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 134/309 (43%), Gaps = 53/309 (17%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+ V+ IS G HS+ I G L+++G N GQLGLG K I P+ V+ L
Sbjct: 24 RDPVISISCGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNH--ISKPSCVKVLKPEKVTH 81
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE--LEGVK 239
A G ++ T K+ + G+ G+LG G S +G S P L+ + G K
Sbjct: 82 VACGRAHTLICTVAEKIFACGSDQEGQLGRG--ISAIG----DSASIPVLVYDSGPTGSK 135
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKM-------LFQEGNHARRPS---------- 282
+ AG HS + +G V+ +G ++ L + P
Sbjct: 136 IVQIVAGSHHSLALTSDGNVFAWGSNLEGQLGLPDISGLVNKPTKVHIPEPVKQINTGYY 195
Query: 283 ----LISGGELYTWGSNENGCLGIG---SIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
L G +Y G +E+G LGI S ++ P+++Q P SPV V+CG HT
Sbjct: 196 HSIFLTENGLVYVCGESESGKLGIDINFSTQIV--PKQMQLP---SPVIHVACGGHHTVI 250
Query: 336 ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNFG--ENVKALQVSCG 392
++E L G +S GQLG G +V +H P ++ G +N K +SCG
Sbjct: 251 LTEKDNLYCT-----------GSNSSGQLGLGTNVTELHIPKLLPRGALKNEKISHISCG 299
Query: 393 FNHTGALLE 401
+HT L E
Sbjct: 300 ESHTAILTE 308
>gi|324509125|gb|ADY43843.1| RCC1 and BTB domain-containing protein 1 [Ascaris suum]
Length = 533
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 115/224 (51%), Gaps = 16/224 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISEN- 108
LG + P ++ +LA G G H L L++ G V++ G N FGQLG+
Sbjct: 54 LGTNRSQGTLEPSRIDTLSGRAIVSLAYGSGPHVLALSQNGEVFSWGHNAFGQLGLGSTT 113
Query: 109 --IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
I SL +SG VVQI+ G HHS A+T GE++ WG+NS GQ+G+G + +P
Sbjct: 114 VGIAPSLVGDTLSG--HNVVQIACGSHHSVAVTDRGEIFAWGRNSCGQVGIGSNVNQDLP 171
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
L+ F + G ++A+T GG+V +WG G+G+LG G S ++
Sbjct: 172 RQVTGHLLNR-FVRSVVCGQNSTMALTDGGEVFAWGFNGNGQLGAGNLS---------NQ 221
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
++P L+ L V ++ A GF HS + + G+++ +G ++
Sbjct: 222 HSPALVIGLHNVVIEQIACGFAHSLALTDEGQLFAWGSNTCGQL 265
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 122/225 (54%), Gaps = 15/225 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ +G+LGLGS P +V H++ +ACG H++ +T+ G ++A G N G
Sbjct: 99 WGHNAFGQLGLGSTTVGIAPSLVGDTLSGHNVVQIACGSHHSVAVTDRGEIFAWGRNSCG 158
Query: 102 QLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+GI N+ L P +++G L + V + G + + A+T GE++ WG N NGQLG G
Sbjct: 159 QVGIGSNVNQDL-PRQVTGHLLNRFVRSVVCGQNSTMALTDGGEVFAWGFNGNGQLGAGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + P V L + +Q A GF S+A+T G++ +WG+ G+L
Sbjct: 218 LSNQ--HSPALVIGLHNVVIEQIACGFAHSLALTDEGQLFAWGSNTCGQL--------CA 267
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
L +++ +P L+ G +++AA + + ++++G+VY++G
Sbjct: 268 NLPRSNQTSPVLVASALGRIIEVAAVHACNITVAVNQSGKVYMWG 312
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 128/269 (47%), Gaps = 44/269 (16%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSA 137
G+ + +T+ G +YA G N LG + + G +LEP RI L + +V ++ G H A
Sbjct: 31 GSEAILVTKEGELYAIGTNSCSCLGTNRSQG-TLEPSRIDTLSGRAIVSLAYGSGPHVLA 89
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
++ +GE++ WG N+ GQLGLG + P + LSG Q A G SVAVT G+
Sbjct: 90 LSQNGEVFSWGHNAFGQLGLGSTTVGIAPSLVG-DTLSGHNVVQIACGSHHSVAVTDRGE 148
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+ +WG G++G G S L +++ G + F+ S +N
Sbjct: 149 IFAWGRNSCGQVGIG------------SNVNQDLPRQVTGHLLN----RFVRSVVCGQNS 192
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 317
+ +L GGE++ WG N NG LG G++ HSP V G
Sbjct: 193 TM----------------------ALTDGGEVFAWGFNGNGQLGAGNLSNQHSPALVIG- 229
Query: 318 FSESPVDQVSCGWKHTAAIS-EGKILTWG 345
++Q++CG+ H+ A++ EG++ WG
Sbjct: 230 LHNVVIEQIACGFAHSLALTDEGQLFAWG 258
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 121/287 (42%), Gaps = 57/287 (19%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I L+ +V S+G + +T +GELY G NS LG + + P++++ LSG
Sbjct: 18 IENLQTAIVFGSSG-SEAILVTKEGELYAIGTNSCSCLGTNRSQGTL--EPSRIDTLSGR 74
Query: 178 FTKQAALGF-EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-L 235
A G +A++ G+V SWG G+LG G +T P L+ + L
Sbjct: 75 AIVSLAYGSGPHVLALSQNGEVFSWGHNAFGQLGLGS---------TTVGIAPSLVGDTL 125
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSN 295
G V A G HS + DR GE++ WG N
Sbjct: 126 SGHNVVQIACGSHHSVAVT---------DR---------------------GEIFAWGRN 155
Query: 296 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFS 354
G +GIGS P +V G V V CG T A+++ G++ WG+ G+
Sbjct: 156 SCGQVGIGSNVNQDLPRQVTGHLLNRFVRSVVCGQNSTMALTDGGEVFAWGFNGN----- 210
Query: 355 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
GQLG GN + P +V NV Q++CGF H+ AL +
Sbjct: 211 -------GQLGAGNLSNQHSPALVIGLHNVVIEQIACGFAHSLALTD 250
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 14/140 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+L ++ P + ++ +ACG AH+L LT+ G ++A G N GQ
Sbjct: 205 WGFNGNGQLGAGNLSNQHSPALVIGLHNVVIEQIACGFAHSLALTDEGQLFAWGSNTCGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV----DGELYMWGKNSNGQLGLG 158
L + P+ ++ +++++ H+ ITV G++YMWG+ GQ
Sbjct: 265 LCANLPRSNQTSPVLVASALGRIIEVAAV--HACNITVAVNQSGKVYMWGQ-VRGQ---- 317
Query: 159 KKAAKVIPIPTKVECLSGIF 178
PI T C+ F
Sbjct: 318 ---TATCPIETHFGCVDDAF 334
>gi|408500676|ref|YP_006864595.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465500|gb|AFU71029.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1193
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 157/371 (42%), Gaps = 72/371 (19%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL---------ACGGAHTLFLTETG 90
A WG+ YGRLG G+ R PV+ ++ + L + G ++L + G
Sbjct: 696 AYAWGSNSYGRLGDGTATQRTTPVLVKKPDRKTYPDLPEDFTYMQVSAGDYYSLAVGSDG 755
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRI----------SGLKKEVVQISTGYHHSSAITV 140
VYA G N +GQLG + + S P+R+ GLK +Q+S G +HS A+
Sbjct: 756 YVYAWGYNSYGQLG-NNSTSSSYVPVRVRDPASPNDASKGLK--AIQVSAGDYHSLALGS 812
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPI-----PTKVECLSGIFTKQAALGFEQSVAVTGG 195
DG Y WG S G+LG +++ +P+ + + G+ Q + G S+AV
Sbjct: 813 DGYAYAWGDGSYGKLGNNSRSSSYVPVRVRDPDSPNDASKGLKATQVSAGQNHSLAVGSD 872
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G +WG G G+LG+ SS +R +P +G+K +AG+ HS +
Sbjct: 873 GYAYAWGDGSYGKLGNYSTSSSSVPVRVRDPASP--TDTSKGLKAAQISAGYGHSLAVGS 930
Query: 256 NGRVYIFG-------------------DRAVDKMLFQEGNHARRPSLISGGE-------- 288
+G Y +G R D + + + + +S G+
Sbjct: 931 DGYAYAWGLNDYYHQLGNNSSSNSSVPVRVRDPDSPSDASKGLKATQVSAGQEHSLAVDK 990
Query: 289 ---LYTWGSNENGCLGIG--------SIDVLHSPERVQ--GPFSESPVDQVSCGWKHTAA 335
Y WG N+NG LGI + VL S + GP+ + Q++ G H+ A
Sbjct: 991 DGNAYAWGDNDNGQLGIKGSGRPYPYPMKVLSSAQSTSAAGPWMRA--VQITAGDHHSLA 1048
Query: 336 I-SEGKILTWG 345
I ++G WG
Sbjct: 1049 IGTDGNTKAWG 1059
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 96/202 (47%), Gaps = 34/202 (16%)
Query: 39 FAALWGNGDYGRLGLGSLES-----RWRPVVCSAFEKHSLKA--LACGGAHTLFLTETGC 91
+A WG+G YG+LG S S R R LKA ++ G H+L + G
Sbjct: 874 YAYAWGDGSYGKLGNYSTSSSSVPVRVRDPASPTDTSKGLKAAQISAGYGHSLAVGSDGY 933
Query: 92 VYATGLNDF-GQLGISENIGYSLEPLRI----------SGLKKEVVQISTGYHHSSAITV 140
YA GLND+ QLG + + S+ P+R+ GLK Q+S G HS A+
Sbjct: 934 AYAWGLNDYYHQLGNNSSSNSSV-PVRVRDPDSPSDASKGLK--ATQVSAGQEHSLAVDK 990
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG----- 195
DG Y WG N NGQLG+ K + + P P KV LS + AA + ++V +T G
Sbjct: 991 DGNAYAWGDNDNGQLGI-KGSGRPYPYPMKV--LSSAQSTSAAGPWMRAVQITAGDHHSL 1047
Query: 196 -----GKVLSWGAGGSGRLGHG 212
G +WG+ GRLG G
Sbjct: 1048 AIGTDGNTKAWGSNRDGRLGDG 1069
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 128/308 (41%), Gaps = 58/308 (18%)
Query: 39 FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS-----LKA--LACGGAHTLFLTETGC 91
+A WG+G YG+LG S S + PV + + LKA ++ G H+L + G
Sbjct: 815 YAYAWGDGSYGKLGNNSRSSSYVPVRVRDPDSPNDASKGLKATQVSAGQNHSLAVGSDGY 874
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRI----------SGLKKEVVQISTGYHHSSAITVD 141
YA G +G+LG S+ P+R+ GLK QIS GY HS A+ D
Sbjct: 875 AYAWGDGSYGKLGNYSTSSSSV-PVRVRDPASPTDTSKGLK--AAQISAGYGHSLAVGSD 931
Query: 142 GELYMWGKNS-NGQLGLGKKAAKVIPI-----PTKVECLSGIFTKQAALGFEQSVAVTGG 195
G Y WG N QLG + +P+ + + G+ Q + G E S+AV
Sbjct: 932 GYAYAWGLNDYYHQLGNNSSSNSSVPVRVRDPDSPSDASKGLKATQVSAGQEHSLAVDKD 991
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G +WG +G+LG ++ + P +K L + AA ++ + I
Sbjct: 992 GNAYAWGDNDNGQLG----------IKGSGRPYPYPMKVLSSAQSTSAAGPWMRAVQI-- 1039
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G+H ++ + G WGSN +G LG G+ + +P V
Sbjct: 1040 -----------------TAGDHHSL-AIGTDGNTKAWGSNRDGRLGDGTTNTKWAPVPVA 1081
Query: 316 GPFSESPV 323
F+ PV
Sbjct: 1082 --FNLQPV 1087
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 119/286 (41%), Gaps = 59/286 (20%)
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK------VECLSGIFT-KQAAL 184
Y S A+ DG Y WG NS G+LG G + P+ K L FT Q +
Sbjct: 684 YGFSLAVGSDGNAYAWGSNSYGRLGDGTATQRTTPVLVKKPDRKTYPDLPEDFTYMQVSA 743
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G S+AV G V +WG G+LG+ SS +R +P +G+K +
Sbjct: 744 GDYYSLAVGSDGYVYAWGYNSYGQLGNNSTSSSYVPVRVRDPASPN--DASKGLKAIQVS 801
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGS 304
AG HS + +G Y +GD + K+ GN++R S +
Sbjct: 802 AGDYHSLALGSDGYAYAWGDGSYGKL----GNNSRSSSYV-------------------- 837
Query: 305 IDVLHSPERVQGPFSESPVD--------QVSCGWKHTAAI-SEGKILTWGWG--GSHGTF 353
P RV+ P +SP D QVS G H+ A+ S+G WG G G G +
Sbjct: 838 ------PVRVRDP--DSPNDASKGLKATQVSAGQNHSLAVGSDGYAYAWGDGSYGKLGNY 889
Query: 354 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
S S ++ D PT + G +KA Q+S G+ H+ A+
Sbjct: 890 STSSSSVPVRV-----RDPASPTDTSKG--LKAAQISAGYGHSLAV 928
>gi|427796171|gb|JAA63537.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 550
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 147/381 (38%), Gaps = 79/381 (20%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A WG D G+LG L+ R P + + + A ACG AHTLFLT+ G V+A G N
Sbjct: 202 AFTWGRNDKGQLGQCDLKRRDLPTLVETLKDSMVVAAACGRAHTLFLTDHGSVFACGDNK 261
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG--- 156
GQ G+ P R++ + V++S G S + G +Y +G GQLG
Sbjct: 262 MGQCGVGSQNASVHVPTRVAFKLRPAVRVSCGGEFSVLVDCRGHVYTFGCPEYGQLGHNT 321
Query: 157 -------LGKKAAKVIPIPTKVEC------------LSGIFTKQAALGFEQSVAVTGGGK 197
K K +P +V+ + + + A G ++A+ +
Sbjct: 322 DGRYFVTSNKLQFKCELVPRRVQVFIDRNREGHVVSVDDVHIVEVASGLNHTIALDERKR 381
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDE 255
SWG GG GRLGH + E PRLIK EG + + AG S + E
Sbjct: 382 CFSWGFGGYGRLGHNEPK---------DEMVPRLIKAFEGPNRGLCSVYAGGTFSMAVSE 432
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G +Y +G NH GGE + P+ +Q
Sbjct: 433 LGVLYFWG----------MNNH--------GGEATMY------------------PKPIQ 456
Query: 316 GPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
+ + + C K +++ +++W G H T+ E G+ G G P
Sbjct: 457 D-LTGWHIRGIGCSNKSIVVLADESVISW---GPHPTYGELGY------GEGRQKSSTTP 506
Query: 376 TIVNFGENVKALQVSCGFNHT 396
V E + V+CG H+
Sbjct: 507 QEVRLLEGIHVHAVACGLGHS 527
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 19/184 (10%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGYH 133
+A G HT+ L E ++ G +G+LG +E + L G + + + G
Sbjct: 366 VASGLNHTIALDERKRCFSWGFGGYGRLGHNEPKDEMVPRLIKAFEGPNRGLCSVYAGGT 425
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
S A++ G LY WG N++G + P ++ L+G + +S+ V
Sbjct: 426 FSMAVSELGVLYFWGMNNHG--------GEATMYPKPIQDLTGWHIRGIGCS-NKSIVVL 476
Query: 194 GGGKVLSWGAGGS-GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
V+SWG + G LG+G+ R S TP+ ++ LEG+ V A G HS
Sbjct: 477 ADESVISWGPHPTYGELGYGEG-------RQKSSTTPQEVRLLEGIHVHAVACGLGHSVF 529
Query: 253 IDEN 256
I +
Sbjct: 530 IARD 533
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 69/168 (41%), Gaps = 26/168 (15%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE--KHSLKALACGGAHTLFLTETGCVY 93
+R+ WG G YGRLG + P + AFE L ++ GG ++ ++E G +Y
Sbjct: 378 ERKRCFSWGFGGYGRLGHNEPKDEMVPRLIKAFEGPNRGLCSVYAGGTFSMAVSELGVLY 437
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH--------HSSAITVDGELY 145
G+N+ G E Y + +Q TG+H S + D +
Sbjct: 438 FWGMNNHG----GEATMYP-----------KPIQDLTGWHIRGIGCSNKSIVVLADESVI 482
Query: 146 MWGKNSN-GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
WG + G+LG G+ K P +V L GI A G SV +
Sbjct: 483 SWGPHPTYGELGYGEGRQKSSTTPQEVRLLEGIHVHAVACGLGHSVFI 530
>gi|427797227|gb|JAA64065.1| Putative alpha-tubulin suppressor, partial [Rhipicephalus
pulchellus]
Length = 606
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 139/313 (44%), Gaps = 50/313 (15%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQ 102
G+ G LGLG P A + + ALA G G H L +TE+G + + G N + Q
Sbjct: 123 GSNSSGCLGLGDTHGSLEPRKVDALCRKGIHALAYGSGPHVLAVTESGELLSWGHNGYCQ 182
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + N L P IS GL V Q++ G HHS A+T +G++Y WG+N+ GQ+G G
Sbjct: 183 LGNNCNT-QGLVPSSISAGLSHRVAQVACGSHHSLALTTNGDVYAWGQNNCGQVGSGSTT 241
Query: 162 AKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P P KV SGI ++ A G S+AV G+V WG G+G+LG G
Sbjct: 242 NQ--PTPRKVS--SGIGGRRCIGVACGQTSSMAVMENGEVFGWGYNGNGQLGLGN----- 292
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ ++ +P + L+GV + G+ H+ + +
Sbjct: 293 ----NVNQTSPCRVTNLQGVVIHKVVCGYAHTMALSDE---------------------- 326
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
G LYTWG+N G LG G+ SP ++ V+ + + H +A+
Sbjct: 327 --------GVLYTWGANSYGQLGTGNKANQVSPFKMPTDIGRI-VEIAASHYNHISAVMT 377
Query: 339 GKILTWGWGGSHG 351
+ WG G
Sbjct: 378 QTSRVYMWGQCRG 390
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 110/223 (49%), Gaps = 13/223 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ Y +LG P SA H + +ACG H+L LT G VYA G N+ GQ
Sbjct: 175 WGHNGYCQLGNNCNTQGLVPSSISAGLSHRVAQVACGSHHSLALTTNGDVYAWGQNNCGQ 234
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+G SG+ + + ++ G S A+ +GE++ WG N NGQLGLG
Sbjct: 235 VGSGSTTNQPTPRKVSSGIGGRRCIGVACGQTSSMAVMENGEVFGWGYNGNGQLGLGNNV 294
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P +V L G+ + G+ ++A++ G + +WGA G+LG G ++
Sbjct: 295 NQTSPC--RVTNLQGVVIHKVVCGYAHTMALSDEGVLYTWGANSYGQLGTGNKA------ 346
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ +P + G V+IAA+ + H SA + + RVY++G
Sbjct: 347 ---NQVSPFKMPTDIGRIVEIAASHYNHISAVMTQTSRVYMWG 386
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 131/308 (42%), Gaps = 63/308 (20%)
Query: 76 LAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQIST 130
LAC G L +T+ V+A G N G LG+ + G SLEP ++ L +K + ++
Sbjct: 99 LACVFGSSGNEALMVTQDDDVFALGSNSSGCLGLGDTHG-SLEPRKVDALCRKGIHALAY 157
Query: 131 GY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G H A+T GEL WG N QLG + +P+ + Q A G S
Sbjct: 158 GSGPHVLAVTESGELLSWGHNGYCQLGNNCNTQGL--VPSSISAGLSHRVAQVACGSHHS 215
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFL 248
+A+T G V +WG G++G G +T++ TPR + + G + A G
Sbjct: 216 LALTTNGDVYAWGQNNCGQVGSGS---------TTNQPTPRKVSSGIGGRRCIGVACGQT 266
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVL 308
S + EN GE++ WG N NG LG+G+
Sbjct: 267 SSMAVMEN------------------------------GEVFGWGYNGNGQLGLGNNVNQ 296
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
SP RV + +V CG+ HT A+S EG + TWG +S GQLG G
Sbjct: 297 TSPCRVTN-LQGVVIHKVVCGYAHTMALSDEGVLYTWGA------------NSYGQLGTG 343
Query: 368 NDVDYIHP 375
N + + P
Sbjct: 344 NKANQVSP 351
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 118/292 (40%), Gaps = 54/292 (18%)
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
I +L+ +S L+ V S+G + + +T D +++ G NS+G LGLG + P
Sbjct: 85 IFSNLDRTFVSKLRLACVFGSSG-NEALMVTQDDDVFALGSNSSGCLGLGDTHGSLEPRK 143
Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
C GI G +AVT G++LSWG G +LG+ +T
Sbjct: 144 VDALCRKGIHALAYGSG-PHVLAVTESGELLSWGHNGYCQLGNNC---------NTQGLV 193
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGE 288
P I +V A G HS +L + G+
Sbjct: 194 PSSISAGLSHRVAQVACGSHHSL------------------------------ALTTNGD 223
Query: 289 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 347
+Y WG N G +G GS +P +V V+CG + A+ E G++ WG+
Sbjct: 224 VYAWGQNNCGQVGSGSTTNQPTPRKVSSGIGGRRCIGVACGQTSSMAVMENGEVFGWGYN 283
Query: 348 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
G+ GQLG GN+V+ P V + V +V CG+ HT AL
Sbjct: 284 GN------------GQLGLGNNVNQTSPCRVTNLQGVVIHKVVCGYAHTMAL 323
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P + + + + CG AHT+ L++ G +Y G N +GQ
Sbjct: 280 WGYNGNGQLGLGNNVNQTSPCRVTNLQGVVIHKVVCGYAHTMALSDEGVLYTWGANSYGQ 339
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTG-YHHSSAI-TVDGELYMWGKNSNGQLGLGKK 160
LG + N + P ++ +V+I+ Y+H SA+ T +YMWG+ GQ
Sbjct: 340 LG-TGNKANQVSPFKMPTDIGRIVEIAASHYNHISAVMTQTSRVYMWGQ-CRGQ------ 391
Query: 161 AAKVIPIPTKVECLSGIF 178
+ +P T + +F
Sbjct: 392 -SVTVPTETPFHSIHDVF 408
>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
Length = 658
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 137/331 (41%), Gaps = 57/331 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG S P + +K +ACG A + L E G +Y G N +GQ
Sbjct: 133 WGRGESGQLGHASFSHSSTPSIIDELASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQ 192
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + ++ + S + V ++ G H +T ++Y WG NS GQLG G +
Sbjct: 193 LGQGDRTSSAIPRMLPSMNHRHVHLMACGAAHIVVLTTSRDVYTWGNNSYGQLGHGFRKK 252
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P V +SG+ KQ G S +T G + +WG G G+LGHG
Sbjct: 253 HCLQ-PKSVRVMSGLDIKQIVAGENHSCVMTSFGDIYTWGRGDFGQLGHGDME------- 304
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
S+ P L+ L+ A + +G +I +
Sbjct: 305 --SKDIPTLLSPLDPKT----------QASLIVSGADFIM-------------------A 333
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHS-----PERVQGP-----FSES------PVDQV 326
+ G +Y+WG N G LG G +D+ +S P V P F+ S + +
Sbjct: 334 MTYSGAVYSWGRNCFGQLGHG-VDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSI 392
Query: 327 SCGWKHTAAISEGKILTWGWG-GSHGTFSED 356
SCG H AI+E K + WG G HG D
Sbjct: 393 SCGSHHVLAITEKKDTLFAWGRGEHGQLGLD 423
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 95/196 (48%), Gaps = 26/196 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG GD+G+LG G +ES+ P + S + + +L GA + +T +G VY+ G N FG
Sbjct: 290 WGRGDFGQLGHGDMESKDIPTLLSPLDPKTQASLIVSGADFIMAMTYSGAVYSWGRNCFG 349
Query: 102 QLGISENIGYS---------LEPLRISGLKKE-------VVQISTGYHHSSAITVDGE-L 144
QLG ++ YS + P IS + IS G HH AIT + L
Sbjct: 350 QLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLAITEKKDTL 409
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT--------GGG 196
+ WG+ +GQLGL + PIP +V+ + G+ AA SV V G
Sbjct: 410 FAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMIVLAAACSENHSVVVATMPGSGPKGDM 469
Query: 197 KVLSWGAGGSGRLGHG 212
KV SWG G G+LG+G
Sbjct: 470 KVFSWGRGSFGQLGYG 485
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 164/406 (40%), Gaps = 75/406 (18%)
Query: 15 KQDIKLGSKLGICKRWISSTLQRRFAALWGNGD-YGRLGLGSLESRWRPVVCSAFEKHSL 73
KQD+K + I +R + + + G +GR S + RP + S+
Sbjct: 55 KQDLKEALSMNIFQRARTEIAKSKLHLTAGATRIHGRF---STYNSQRPQEVVSLAGLSI 111
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGY 132
K + CG H L L +G + + G + GQLG + + +S P I L + V +++ G
Sbjct: 112 KLITCGSDHVLALDASGKIRSWGRGESGQLGHA-SFSHSSTPSIIDELASQRVKEVACGV 170
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
S+A+ G+LY WG N GQLG G + + IP + ++ A G V +
Sbjct: 171 AFSAALMEGGQLYTWGCNRYGQLGQGDRTSSA--IPRMLPSMNHRHVHLMACGAAHIVVL 228
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T V +WG G+LGHG R P+ ++ + G+ +K AG HS C
Sbjct: 229 TTSRDVYTWGNNSYGQLGHG--------FRKKHCLQPKSVRVMSGLDIKQIVAGENHS-C 279
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + S G++YTWG + G LG G ++ P
Sbjct: 280 V-----------------------------MTSFGDIYTWGRGDFGQLGHGDMESKDIPT 310
Query: 313 RVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+ ++ + G A++ G + +WG + GQLGHG D+
Sbjct: 311 LLSPLDPKTQASLIVSGADFIMAMTYSGAVYSWG------------RNCFGQLGHGVDMH 358
Query: 372 Y----------IHPTIVNF------GENVKALQVSCGFNHTGALLE 401
Y I P I++F + + +SCG +H A+ E
Sbjct: 359 YSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLAITE 404
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 138/320 (43%), Gaps = 54/320 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G S P + + + +ACG AH + LT + VY G N +GQ
Sbjct: 185 WGCNRYGQLGQGDRTSSAIPRMLPSMNHRHVHLMACGAAHIVVLTTSRDVYTWGNNSYGQ 244
Query: 103 LGISENIGYSLEPLRI---SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG + L+P + SGL ++ QI G +HS +T G++Y WG+ GQLG G
Sbjct: 245 LGHGFRKKHCLQPKSVRVMSGL--DIKQIVAGENHSCVMTSFGDIYTWGRGDFGQLGHGD 302
Query: 160 KAAKVIPIPTKVECLSGIFTK-QAAL---GFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+K IP LS + K QA+L G + +A+T G V SWG G+LGHG +
Sbjct: 303 MESKDIPT-----LLSPLDPKTQASLIVSGADFIMAMTYSGAVYSWGRNCFGQLGHGVDM 357
Query: 216 SILGFLRSTSEY-TPRLI------KELEGVKVKIAAAGFLHSACIDENGRVYI------F 262
R S+ +P++I +E + + + + G H I E
Sbjct: 358 HYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLAITEKKDTLFAWGRGEH 417
Query: 263 GDRAVD------KMLFQE---------------GNHARRPSLISGG------ELYTWGSN 295
G +D + + QE NH+ + + G ++++WG
Sbjct: 418 GQLGLDPRDTSFRPIPQEVKKMKGMIVLAAACSENHSVVVATMPGSGPKGDMKVFSWGRG 477
Query: 296 ENGCLGIGSIDVLHSPERVQ 315
G LG GS V E VQ
Sbjct: 478 SFGQLGYGSGKVPVMKETVQ 497
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 97/237 (40%), Gaps = 54/237 (22%)
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P +V L+G+ K G + +A+ GK+ SWG G SG+LGH F S+
Sbjct: 100 PQEVVSLAGLSIKLITCGSDHVLALDASGKIRSWGRGESGQLGHA------SFSHSS--- 150
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
TP +I EL +VK A G SA +L+ GG
Sbjct: 151 TPSIIDELASQRVKEVACGVAFSA------------------------------ALMEGG 180
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK-ILTWGW 346
+LYTWG N G LG G P R+ + V ++CG H ++ + + TW
Sbjct: 181 QLYTWGCNRYGQLGQGDRTSSAIP-RMLPSMNHRHVHLMACGAAHIVVLTTSRDVYTW-- 237
Query: 347 GGSHGTFSEDGHSSGGQLGHGNDVDY-IHPTIVNFGENVKALQVSCGFNHTGALLEY 402
G++S GQLGHG + + P V + Q+ G NH+ + +
Sbjct: 238 ----------GNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSF 284
>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
Length = 2335
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 135/299 (45%), Gaps = 46/299 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LG GS P F + ++ ++CG +H+ + +G +Y G +G+
Sbjct: 540 WGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGR 599
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI--TVDGELYMWGKNSNGQLGLGK 159
LG N L+P + L ++VVQ++ G + + T DG +Y WG G+LG G
Sbjct: 600 LGHGNNHTL-LKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGG 658
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+P P VE LSG + G + S+A++ G V +WG G RLGHG + +
Sbjct: 659 SDGCCVPKP--VERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHV-- 714
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L KV A G LH + E
Sbjct: 715 -------RRPQVVEGLREHKVVDVAVGALHCLAVTE------------------------ 743
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
GG+++ WG N++G G G V P +VQG + +++CG H+ A ++
Sbjct: 744 ------GGQVFAWGDNDHGQQGNGGTTVNRKPMKVQG-LEGVKITKLACGSSHSIAFAD 795
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 173/389 (44%), Gaps = 56/389 (14%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
+WG D +LG PV ++ + + GG+ +LF +T G VYA G +
Sbjct: 434 VWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVI-GGSKSLFAVTMGGKVYACGESTS 492
Query: 101 GQLG---ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG ++ ++ + L +KK + + +G H+ A+T DG +Y WG G+LG
Sbjct: 493 GRLGLGPVTGSVSRLTQVLFPQPIKK--LAVHSGGRHAMALTYDGHVYSWGDGEEGKLGH 550
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G +A + P K+E + + G S A+ G + +WG G GRLGHG ++
Sbjct: 551 GSRADAL--TPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTL 608
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGD----------- 264
L P+ ++ L G +V A G + C+ ++G VY +GD
Sbjct: 609 L---------KPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGS 659
Query: 265 ------RAVDKMLFQ-----EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ V+++ Q E +L G ++TWG + LG GS + P+
Sbjct: 660 DGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQV 719
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V+G E V V+ G H A++E G++ WG ++ H GQ G+G
Sbjct: 720 VEG-LREHKVVDVAVGALHCLAVTEGGQVFAWG---------DNDH---GQQGNGGTTVN 766
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGALLE 401
P V E VK +++CG +H+ A +
Sbjct: 767 RKPMKVQGLEGVKITKLACGSSHSIAFAD 795
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 166/389 (42%), Gaps = 59/389 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P+ C + +LK + GG TLF +T G V+ATG
Sbjct: 1412 WGHNHRGQLGGPEGAKVKIPIPCPSLA--ALKPIQLVGGEQTLFTVTGEGKVFATGYGAG 1469
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQIST--GYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LGI N ++ L S + Q+S G H A++ +GE+Y WG+ +G+LG G
Sbjct: 1470 GRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHG 1529
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+++ + P +E L G + A G S A+ G + +WG G GRLGH
Sbjct: 1530 NRSS--LDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHED----- 1582
Query: 219 GFLRSTSEYTPRLIKEL-EGVKVKIAAA-GFLHSACIDE----NGRVYIFGD-------- 264
S + P+L+ L + + V +A G + CI E + V+ +GD
Sbjct: 1583 ----SEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGR 1638
Query: 265 ---------RAVDKMLFQEGNHARRPSLIS-----GGELYTWGSNENGCLGIGSIDVLHS 310
+D ++ + H S S G +YTWG + LG GS + +
Sbjct: 1639 GGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRR 1698
Query: 311 PERVQGPFSESPVDQVSCGWKH-TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 369
P+ ++ V +VS G H AA+ G + TW G + GQ+G G
Sbjct: 1699 PKLIES-LRGMKVVEVSVGSLHCIAAVDNGDVYTW------------GDNDEGQIGDGTT 1745
Query: 370 VDYIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + VSCG HT A
Sbjct: 1746 QATQIPRLVAALQGHHISHVSCGSAHTVA 1774
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 156/352 (44%), Gaps = 59/352 (16%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISE--NIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
TL +G ++ G N GQLG E + + ++ LK +Q+ G +T
Sbjct: 1400 TLSWVGSGSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKP--IQLVGGEQTLFTVTG 1457
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
+G+++ G + G+LG+G + + IPT +E + + Q ++ G + +A++ G+V
Sbjct: 1458 EGKVFATGYGAGGRLGIGSNES--VAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEV 1515
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG SS+ PR+I+ L G + A G HSA I+ G
Sbjct: 1516 YSWGEGVDGKLGHGNRSSL---------DHPRIIESLRGDLIVKVATGGSHSAAINATGG 1566
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLI--------------------------SGGE--LY 290
+Y +G ++ ++ +P L+ +GG ++
Sbjct: 1567 LYTWGKGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVW 1626
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
+WG + G LG G D P + + + V+CG + + A+S+ G + TWG G
Sbjct: 1627 SWGDGDYGKLGRGGSDGCKVPAIIDTLMGKH-ITHVACGSQFSLALSKAGGVYTWGKGDY 1685
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG+D P ++ +K ++VS G H A ++
Sbjct: 1686 Y------------RLGHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVD 1725
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 110/252 (43%), Gaps = 54/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
++++WG N QLG K + P+ +K L + Q G + AVT GGKV +
Sbjct: 430 AKVFVWGLNDKDQLGGLKGSKHKTPVASKD--LQRLKVTQVIGGSKSLFAVTMGGKVYAC 487
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G SGRLG G + + R T P+ IK+L +HS
Sbjct: 488 GESTSGRLGLGPVTGSVS--RLTQVLFPQPIKKLA-----------VHSG---------- 524
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
G HA +L G +Y+WG E G LG GS +P +++ F E
Sbjct: 525 -------------GRHAM--ALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIET-FPEK 568
Query: 322 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
+ +SCG H+AAI S G + TWG HG + G+LGHGN+ + P V
Sbjct: 569 CIRDISCGSSHSAAIGSSGTLYTWG----HGMY--------GRLGHGNNHTLLKPKPVQA 616
Query: 381 GENVKALQVSCG 392
+ +QV+CG
Sbjct: 617 LSGQQVVQVACG 628
>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 2334
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 135/299 (45%), Gaps = 46/299 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LG GS P F + ++ ++CG +H+ + +G +Y G +G+
Sbjct: 539 WGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGR 598
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI--TVDGELYMWGKNSNGQLGLGK 159
LG N L+P + L ++VVQ++ G + + T DG +Y WG G+LG G
Sbjct: 599 LGHGNNHTL-LKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGG 657
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+P P VE LSG + G + S+A++ G V +WG G RLGHG + +
Sbjct: 658 SDGCCVPKP--VERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHV-- 713
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L KV A G LH + E
Sbjct: 714 -------RRPQVVEGLREHKVVDVAVGALHCLAVTE------------------------ 742
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
GG+++ WG N++G G G V P +VQG + +++CG H+ A ++
Sbjct: 743 ------GGQVFAWGDNDHGQQGNGGTTVNRKPMKVQG-LEGVKITKLACGSSHSIAFAD 794
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 173/389 (44%), Gaps = 56/389 (14%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
+WG D +LG PV ++ + + GG+ +LF +T G VYA G +
Sbjct: 433 VWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVI-GGSKSLFAVTMGGKVYACGESTS 491
Query: 101 GQLG---ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG ++ ++ + L +KK + + +G H+ A+T DG +Y WG G+LG
Sbjct: 492 GRLGLGPVTGSVSRLTQVLFPQPIKK--LAVHSGGRHAMALTYDGHVYSWGDGEEGKLGH 549
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G +A + P K+E + + G S A+ G + +WG G GRLGHG ++
Sbjct: 550 GSRADAL--TPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTL 607
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGD----------- 264
L P+ ++ L G +V A G + C+ ++G VY +GD
Sbjct: 608 L---------KPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGS 658
Query: 265 ------RAVDKMLFQ-----EGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ V+++ Q E +L G ++TWG + LG GS + P+
Sbjct: 659 DGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQV 718
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V+G E V V+ G H A++E G++ WG ++ H GQ G+G
Sbjct: 719 VEG-LREHKVVDVAVGALHCLAVTEGGQVFAWG---------DNDH---GQQGNGGTTVN 765
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGALLE 401
P V E VK +++CG +H+ A +
Sbjct: 766 RKPMKVQGLEGVKITKLACGSSHSIAFAD 794
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 166/389 (42%), Gaps = 59/389 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P+ C + +LK + GG TLF +T G V+ATG
Sbjct: 1411 WGHNHRGQLGGPEGAKVKIPIPCPSLA--ALKPIQLVGGEQTLFTVTGEGKVFATGYGAG 1468
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQIST--GYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LGI N ++ L S + Q+S G H A++ +GE+Y WG+ +G+LG G
Sbjct: 1469 GRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHG 1528
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+++ + P +E L G + A G S A+ G + +WG G GRLGH
Sbjct: 1529 NRSS--LDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHED----- 1581
Query: 219 GFLRSTSEYTPRLIKEL-EGVKVKIAAA-GFLHSACIDE----NGRVYIFGD-------- 264
S + P+L+ L + + V +A G + CI E + V+ +GD
Sbjct: 1582 ----SEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGR 1637
Query: 265 ---------RAVDKMLFQEGNHARRPSLIS-----GGELYTWGSNENGCLGIGSIDVLHS 310
+D ++ + H S S G +YTWG + LG GS + +
Sbjct: 1638 GGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRR 1697
Query: 311 PERVQGPFSESPVDQVSCGWKH-TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 369
P+ ++ V +VS G H AA+ G + TW G + GQ+G G
Sbjct: 1698 PKLIES-LRGMKVVEVSVGSLHCIAAVDNGDVYTW------------GDNDEGQIGDGTT 1744
Query: 370 VDYIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + VSCG HT A
Sbjct: 1745 QATQIPRLVAALQGHHISHVSCGSAHTVA 1773
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 156/352 (44%), Gaps = 59/352 (16%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISE--NIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
TL +G ++ G N GQLG E + + ++ LK +Q+ G +T
Sbjct: 1399 TLSWVGSGSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKP--IQLVGGEQTLFTVTG 1456
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
+G+++ G + G+LG+G + + IPT +E + + Q ++ G + +A++ G+V
Sbjct: 1457 EGKVFATGYGAGGRLGIGSNES--VAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEV 1514
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG SS+ PR+I+ L G + A G HSA I+ G
Sbjct: 1515 YSWGEGVDGKLGHGNRSSL---------DHPRIIESLRGDLIVKVATGGSHSAAINATGG 1565
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLI--------------------------SGGE--LY 290
+Y +G ++ ++ +P L+ +GG ++
Sbjct: 1566 LYTWGKGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVW 1625
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
+WG + G LG G D P + + + V+CG + + A+S+ G + TWG G
Sbjct: 1626 SWGDGDYGKLGRGGSDGCKVPAIIDTLMGKH-ITHVACGSQFSLALSKAGGVYTWGKGDY 1684
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG+D P ++ +K ++VS G H A ++
Sbjct: 1685 Y------------RLGHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVD 1724
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 110/252 (43%), Gaps = 54/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
++++WG N QLG K + P+ +K L + Q G + AVT GGKV +
Sbjct: 429 AKVFVWGLNDKDQLGGLKGSKHKTPVASKD--LQRLKVTQVIGGSKSLFAVTMGGKVYAC 486
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G SGRLG G + + R T P+ IK+L +HS
Sbjct: 487 GESTSGRLGLGPVTGSVS--RLTQVLFPQPIKKLA-----------VHSG---------- 523
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
G HA +L G +Y+WG E G LG GS +P +++ F E
Sbjct: 524 -------------GRHAM--ALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIET-FPEK 567
Query: 322 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
+ +SCG H+AAI S G + TWG HG + G+LGHGN+ + P V
Sbjct: 568 CIRDISCGSSHSAAIGSSGTLYTWG----HGMY--------GRLGHGNNHTLLKPKPVQA 615
Query: 381 GENVKALQVSCG 392
+ +QV+CG
Sbjct: 616 LSGQQVVQVACG 627
>gi|386813626|ref|ZP_10100850.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403123|dbj|GAB63731.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 407
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 164/359 (45%), Gaps = 55/359 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ R PV +++ A+A G H++ LT G V+ G N GQ
Sbjct: 82 WGQNMHGQLGDGTNTDRKIPVQVKDL--NNVTAIAGGAWHSVALTSDGTVWTWGSNWAGQ 139
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + +P++++ LK + I++ H+ A+ DG ++ WG+N GQLG G
Sbjct: 140 LGDGTTKSRN-KPVQVNNLK-NITAIASKGLHNLALKSDGTVWTWGRNIYGQLGDGTTTD 197
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ T+ L+ I + A G S+A G + +WG G+LG G
Sbjct: 198 RNTPVQTR--SLNTIIS--IAGGGYHSLAQKADGTIWTWGLNQYGQLGDGT--------- 244
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--------DRAVDK----- 269
T+ P L+ ++ V + G HS + NG ++I+G DR+ D
Sbjct: 245 ITNRTIPVLVNGIK--DVSMIRCGGDHSIVLKNNGTIWIWGFNQHGQLGDRSTDNRSTPV 302
Query: 270 -------MLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 322
++ +G L S G ++TWG+NENG LG G+ +P + + S
Sbjct: 303 PMGDLKNIMTIDGGGDHSLILKSDGTVWTWGNNENGQLGDGTTMSRATPIQAS---TLSN 359
Query: 323 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
V ++ G +H+ A+ S+G I W WG + GQLG G+ + P +V
Sbjct: 360 VTAIASGEQHSIALKSDGTI--WAWGSNR----------NGQLGDGSISNRSTPVLVKI 406
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 122/272 (44%), Gaps = 41/272 (15%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
RI ++Q+S G HS A+ DG + WG+N +GQLG G + IP+ +V+ L+
Sbjct: 52 RIPIFASTILQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPV--QVKDLNN 109
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
+ A G SVA+T G V +WG+ +G+LG G + S P + L+
Sbjct: 110 V--TAIAGGAWHSVALTSDGTVWTWGSNWAGQLGDGT---------TKSRNKPVQVNNLK 158
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFG--------------------DRAVDKMLFQEGN 276
+ IA+ G LH+ + +G V+ +G R+++ ++ G
Sbjct: 159 NI-TAIASKG-LHNLALKSDGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSLNTIISIAGG 216
Query: 277 HARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 336
+ + G ++TWG N+ G LG G+I P V G V + CG H+ +
Sbjct: 217 GYHSLAQKADGTIWTWGLNQYGQLGDGTITNRTIPVLVNGI---KDVSMIRCGGDHSIVL 273
Query: 337 -SEGKILTWGWG--GSHGTFSEDGHSSGGQLG 365
+ G I WG+ G G S D S+ +G
Sbjct: 274 KNNGTIWIWGFNQHGQLGDRSTDNRSTPVPMG 305
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 4/131 (3%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG +G+LG S ++R PV + ++ + GG H+L L G V+ G N+ G
Sbjct: 281 IWGFNQHGQLGDRSTDNRSTPVPMGDLK--NIMTIDGGGDHSLILKSDGTVWTWGNNENG 338
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG + + P++ S L V I++G HS A+ DG ++ WG N NGQLG G +
Sbjct: 339 QLGDGTTMSRA-TPIQASTLS-NVTAIASGEQHSIALKSDGTIWAWGSNRNGQLGDGSIS 396
Query: 162 AKVIPIPTKVE 172
+ P+ K++
Sbjct: 397 NRSTPVLVKIK 407
>gi|428178444|gb|EKX47319.1| hypothetical protein GUITHDRAFT_42892, partial [Guillardia theta
CCMP2712]
Length = 240
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 132/264 (50%), Gaps = 50/264 (18%)
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G +H++ ++ G++Y WG N GQLG + +++ +P+++ L +F A+ G ++
Sbjct: 1 GPYHAALVSGLGDVYTWGANFFGQLG--RDYSRLWSLPSELH-LPNVFVVSASCGGMHTL 57
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
++ GKV S+G G +GRLGHG R+ S P+ I LE ++ AAG+ HS
Sbjct: 58 LLSKEGKVFSFGDGANGRLGHGN-------CRNYS--LPQPIASLESKRITFIAAGWTHS 108
Query: 251 ACIDENGRVYIFG-----------------DRAVDKM-------LFQEGNHARRPSLISG 286
ID++G+++ +G R VD++ + G++
Sbjct: 109 MAIDDDGKLFTWGCGNAGRLGHGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVCCEN 168
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES-PVDQVSCGWKHTAAIS-EGKILTW 344
G ++TWG E+G LG+GS + P V+ + + +VSCG HTAA++ +G +LTW
Sbjct: 169 GTVWTWGLGEHGQLGVGSTESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTNDGTLLTW 228
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGN 368
G G GQLGHGN
Sbjct: 229 GRG------------DWGQLGHGN 240
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 86/173 (49%), Gaps = 4/173 (2%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+G GRLG G+ + P ++ E + +A G H++ + + G ++ G + G+L
Sbjct: 69 GDGANGRLGHGNCRNYSLPQPIASLESKRITFIAAGWTHSMAIDDDGKLFTWGCGNAGRL 128
Query: 104 GISENIGYSLEPL---RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G N+ P R+ ++ + + S Y HS+ +G ++ WG +GQLG+G
Sbjct: 129 G-HGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVCCENGTVWTWGLGEHGQLGVGST 187
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+ + P+ K + + + + G + AVT G +L+WG G G+LGHG
Sbjct: 188 ESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTNDGTLLTWGRGDWGQLGHGN 240
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 95/194 (48%), Gaps = 21/194 (10%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHS 135
+CGG HTL L++ G V++ G G+LG YSL P I+ L+ K + I+ G+ HS
Sbjct: 50 SCGGMHTLLLSKEGKVFSFGDGANGRLGHGNCRNYSL-PQPIASLESKRITFIAAGWTHS 108
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSGIFTK--QAALGFEQSVA 191
AI DG+L+ WG + G+LG G V+ + P V+ L I K A+ ++ S
Sbjct: 109 MAIDDDGKLFTWGCGNAGRLGHG----NVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAV 164
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI--AAAGFLH 249
G V +WG G G+LG G S L P L+K + + I + G H
Sbjct: 165 CCENGTVWTWGLGEHGQLGVGSTESHL---------EPVLVKSMADANLHIVEVSCGGAH 215
Query: 250 SACIDENGRVYIFG 263
+A + +G + +G
Sbjct: 216 TAAVTNDGTLLTWG 229
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 90/220 (40%), Gaps = 56/220 (25%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G + V+G G V +WGA G+LG ++ S L L S L V V A+
Sbjct: 1 GPYHAALVSGLGDVYTWGANFFGQLG--RDYSRLWSLPSE--------LHLPNVFVVSAS 50
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGS 304
G +H+ + + G+V+ FGD A NG LG G+
Sbjct: 51 CGGMHTLLLSKEGKVFSFGDGA------------------------------NGRLGHGN 80
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 363
P+ + + ++ GW H+ AI + GK+ TWG G + G+
Sbjct: 81 CRNYSLPQPIA-SLESKRITFIAAGWTHSMAIDDDGKLFTWGCG------------NAGR 127
Query: 364 LGHGNDVDYIHPTIVN--FGENVKALQVSCGFNHTGALLE 401
LGHGN +D P V+ + +KA+ S ++H+ E
Sbjct: 128 LGHGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVCCE 167
>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
Length = 1699
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 145/364 (39%), Gaps = 62/364 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G YG LG G R + S ++ + G LT G V GLN GQ
Sbjct: 334 GQNSYGELGTGDDIERHQLTSVSLCGWDDIRQVVSGNETLAVLTNEGVVLTCGLNKSGQC 393
Query: 104 G---ISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G E + L P++ + + + + S G H A+T G Y WG N GQLG
Sbjct: 394 GQGHFDERV-MMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDRGQLGHEN 452
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--HGQESSI 217
A K I +P +E L A++ + S +T G++ ++G G+LG H Q S
Sbjct: 453 LATK-IHVPKLIESLKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQS- 510
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
TP+L+K LE +V + A G H+
Sbjct: 511 ----------TPQLVKSLEATEVSMVACGLYHTIIC------------------------ 536
Query: 278 ARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 337
+ GEL+T G N+ G LG+ + P V P V V+CG+ H+ +S
Sbjct: 537 ------TAAGELFTCGKNDYGQLGLAHNRQIKLPTLVALP--NEMVSFVACGYYHSVVVS 588
Query: 338 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
GG +F G + GQLG G+ V P +V N + ++ +CG HT
Sbjct: 589 T--------GGRAFSF---GRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTV 637
Query: 398 ALLE 401
L E
Sbjct: 638 LLSE 641
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 147/362 (40%), Gaps = 65/362 (17%)
Query: 49 GRLGLGSLESR---WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
G+ G G + R RPV ++ A + G H + LT+TG Y+ G ND GQLG
Sbjct: 391 GQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDRGQLG- 449
Query: 106 SENIGYSLE-PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
EN+ + P I LK K++ S YHHS+ IT GELY +G N GQLGL +
Sbjct: 450 HENLATKIHVPKLIESLKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQ 509
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
P V+ L A G ++ T G++ + G G+LG I
Sbjct: 510 --STPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHNRQI------ 561
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
P L+ L V A G+ HS + GR + F
Sbjct: 562 ---KLPTLVA-LPNEMVSFVACGYYHSVVVSTGGRAFSF--------------------- 596
Query: 284 ISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKIL 342
G N+ G LGIGS V + V S + + + +CG HT +SE G++
Sbjct: 597 ---------GRNDYGQLGIGS-KVHQNVPNVVALSSNTRMVRATCGCYHTVLLSEQGQVY 646
Query: 343 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF---GENVKALQVSCGFNHTGAL 399
+ G ++ GQLG+ D + P + + + + V+ GF T +
Sbjct: 647 VF------------GRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCVDVAAGFYTTSLI 694
Query: 400 LE 401
+E
Sbjct: 695 VE 696
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 119/264 (45%), Gaps = 18/264 (6%)
Query: 1 MLGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRW 60
M+ R + A+ Q +K + C+ I+ T A WG D G+LG +L ++
Sbjct: 403 MMLRPVQALRS----QRVKFIAASNGCEHMIALT-DTGLAYSWGYNDRGQLGHENLATKI 457
Query: 61 R-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
P + + + L + H+ +T+ G +Y G+ND GQLG+ S L S
Sbjct: 458 HVPKLIESLKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKS 517
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
EV ++ G +H+ T GEL+ GKN GQLGL + I +PT V L
Sbjct: 518 LEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHN--RQIKLPTLV-ALPNEMV 574
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
A G+ SV V+ GG+ S+G G+LG G + + P ++ +
Sbjct: 575 SFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSK---------VHQNVPNVVALSSNTR 625
Query: 240 VKIAAAGFLHSACIDENGRVYIFG 263
+ A G H+ + E G+VY+FG
Sbjct: 626 MVRATCGCYHTVLLSEQGQVYVFG 649
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 69/128 (53%), Gaps = 1/128 (0%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G DYG+LGL P + A + +ACG H++ ++ G ++ G ND+GQL
Sbjct: 546 GKNDYGQLGLAHNRQIKLPTLV-ALPNEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQL 604
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
GI + ++ + +V+ + G +H+ ++ G++Y++G+N+ GQLG A
Sbjct: 605 GIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLSEQGQVYVFGRNNKGQLGNRGSADA 664
Query: 164 VIPIPTKV 171
++P+P KV
Sbjct: 665 LLPVPLKV 672
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 11/129 (8%)
Query: 31 ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
+ ST R F+ +G DYG+LG+GS + P V + + CG HT+ L+E G
Sbjct: 586 VVSTGGRAFS--FGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLSEQG 643
Query: 91 CVYATGLNDFGQLGISENIGYSLE-PLRISGLK--KEVVQISTGYHHSSAITV------D 141
VY G N+ GQLG + L PL++ K + V ++ G++ +S I D
Sbjct: 644 QVYVFGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCVDVAAGFYTTSLIVERKRENDD 703
Query: 142 GELYMWGKN 150
G++ M ++
Sbjct: 704 GDVIMLDQS 712
>gi|237835825|ref|XP_002367210.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|211964874|gb|EEB00070.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|221506115|gb|EEE31750.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii VEG]
Length = 1205
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 169/390 (43%), Gaps = 53/390 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVC-------SAFEKHSL------------KALACGGAHT 83
WG G YG LG G + PV S +K ++ + G H+
Sbjct: 205 WGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHS 264
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDG 142
+ T G ++ G G+LG+ N G SL P + L +++V ++ G HS+ I G
Sbjct: 265 MACTSDGTLWTWGHGGNGRLGLGHNRG-SLSPAVVDYILDRDIVFVNAGDSHSACIDRQG 323
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
LY WG G+LG G + IP+P KVE G+ Q A G ++A+T G V +WG
Sbjct: 324 VLYTWGSGGFGRLGHGDQGE--IPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWG 381
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
AG + G G++ S G + + P+ + ++E + I AAG HSA + G + ++
Sbjct: 382 AGLALGFGEGEDGS--GGMVA----VPKHLSDIEAAVLNI-AAGPYHSAAVTVGGDLLVW 434
Query: 263 GDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGI-------GSIDVLHSPERVQ 315
G ++ + + P ++ + S+ LG+ +DVL P
Sbjct: 435 GVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSG 494
Query: 316 GPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV--DYI 373
S + + CG HT A++ G W W G + GQLG G DV D
Sbjct: 495 TNQSSWTLQSLECGESHTIALT-GAGAVWVW----------GSNDDGQLGLGEDVEEDQY 543
Query: 374 HPTIVN-FGENVKALQVSCGFNHTGALLEY 402
P + F ++ +++CG H A+ +Y
Sbjct: 544 EPVKLECFSTPIR--RIACGSKHCLAVAQY 571
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 149/339 (43%), Gaps = 80/339 (23%)
Query: 42 LWGNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
+WG+ D G+LGLG E ++ PV F ++ +ACG H L + + G V+A G ND
Sbjct: 523 VWGSNDDGQLGLGEDVEEDQYEPVKLECFST-PIRRIACGSKHCLAVAQYGDVFAWGAND 581
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT-------VDGE-------LY 145
GQLG+ + S EP ++ L ++ V + G +S+ IT V GE L+
Sbjct: 582 NGQLGLGV-VRPSFEPAAVTAL-RQAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLW 639
Query: 146 MWGKNSNGQLGLGKKAAK---------VIPIPT--------------KVECLSGIFTKQA 182
WG +G+LGLG+ A V +P +V C+S F+
Sbjct: 640 AWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVS--FSPLC 697
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
+ G S+A+T G+ +WGAG GRLG G + + YTP +GV+++
Sbjct: 698 S-GTSHSLAITAQGECYAWGAGYYGRLGIGT---------TANAYTPTRCDFPKGVRLRS 747
Query: 243 AAAGFLHSACIDENGRVYIFGDR----------------------AVDKMLFQEGNHARR 280
AAG HS + +G ++ +G R V K+ +
Sbjct: 748 VAAGACHSLALSMDGDLWFWGRREDTCSTTNYMSPRIFMQLEGQGGVPKVKSISASERHS 807
Query: 281 PSLISGGELYTWGSN---ENGCLGIGSIDVLHSPERVQG 316
++ GE++ WG N + GC G + L PERV G
Sbjct: 808 LAVTEAGEVFAWGDNKLYQTGC-GKRQAERLDRPERVAG 845
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 140/300 (46%), Gaps = 30/300 (10%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS-LEPLRISGLKKEVVQIST 130
+L++L CG +HT+ LT G V+ G ND GQLG+ E++ EP+++ + +I+
Sbjct: 501 TLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIRRIAC 560
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGK-----KAAKVIPIPTKVECLSGIFTKQ--AA 183
G H A+ G+++ WG N NGQLGLG + A V + V+ G +
Sbjct: 561 GSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQAVDVFCGDDYSACITS 620
Query: 184 LGFEQSVAVTGG---GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
LG QSV+ G G + +WGA SG+LG G++ + S S TP+ + V
Sbjct: 621 LGGAQSVSGETGTEFGDLWAWGAAESGKLGLGED------VASGSILTPQKVV----FSV 670
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCL 300
+ A L S + RV+ L +H+ ++ + GE Y WG+ G L
Sbjct: 671 PVCACS-LDSLEMQAYKRVFCVSFSP----LCSGTSHSL--AITAQGECYAWGAGYYGRL 723
Query: 301 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 360
GIG+ ++P R P + V+ G H+ A+S L W WG T S + S
Sbjct: 724 GIGTTANAYTPTRCDFP-KGVRLRSVAAGACHSLALSMDGDL-WFWGRREDTCSTTNYMS 781
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 80/170 (47%), Gaps = 1/170 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YGRLG+G+ + + P C + L+++A G H+L L+ G ++ G +
Sbjct: 715 WGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALSMDGDLWFWGRREDTC 774
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+ L G +V IS HS A+T GE++ WG N Q G GK+ A
Sbjct: 775 STTNYMSPRIFMQLEGQGGVPKVKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQA 834
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+ + P +V L + A G + S + G+V + G SGRLG G
Sbjct: 835 ERLDRPERVAGLPSA-CQWVATGPQGSFFILASGEVFAAGVIKSGRLGTG 883
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 150/375 (40%), Gaps = 64/375 (17%)
Query: 68 FEKHSLKALACGGAHTLFLTETG---CVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
F S+K +A G HTL + G ++ G N LG+ I + P + K
Sbjct: 43 FGPASVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKM 102
Query: 125 -VVQISTGYHHSSAITVD-----GELYMWGKNSNGQLGLGKKAAKVI------------- 165
++S G ++S+ + G++Y +G + G+LG K A +
Sbjct: 103 GTFEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQE 162
Query: 166 -------PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
P P++V + + G + ++A++ G + +WG G G LG G S
Sbjct: 163 DGPSWFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSY 222
Query: 219 GFLRST--SEYTPRLIKELEGVK--------VKIAAAGFLHSACIDENGRVYIFG----- 263
+R SE KE GV V +AG HS +G ++ +G
Sbjct: 223 TPVRVYLGSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNG 282
Query: 264 ----------------DRAVDK-MLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSID 306
D +D+ ++F + + G LYTWGS G LG G
Sbjct: 283 RLGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQG 342
Query: 307 VLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLG 365
+ P +V+G F PV QV+CG HT A++ +G + WG G + G F E SGG +
Sbjct: 343 EIPVPRKVEG-FGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALG-FGEGEDGSGGMVA 400
Query: 366 HGNDVDYIHPTIVNF 380
+ I ++N
Sbjct: 401 VPKHLSDIEAAVLNI 415
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 36/138 (26%)
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERV----QGPFSESPVDQVSCGWKHTAAISE----- 338
+L+ WG N + LG+G + ERV FS+ +VSCG ++A + +
Sbjct: 69 QLFGWGKNYSNVLGMG----VEIRERVFPGLVPFFSKMGTFEVSCGTNNSAVLVKRAQQP 124
Query: 339 -GKILTWGWG----------------GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 381
GK+ T+G G G G FS DG G P+ V F
Sbjct: 125 GGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWFTPK------PSRVRFR 178
Query: 382 ENVKALQVSCGFNHTGAL 399
+ K ++SCG +HT AL
Sbjct: 179 DKCKIARISCGADHTLAL 196
>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
africana]
Length = 551
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 124/248 (50%), Gaps = 16/248 (6%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
+ G G LGLG ++S P + + L+ G G H + T G V+ G N +
Sbjct: 69 VLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAY 128
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG + + L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G
Sbjct: 129 SQLG-NGTTNHGLVPCYISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSG 187
Query: 159 KKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
A + PIP +V CL A G S+AV G+V WG G+G+LG G
Sbjct: 188 STANQ--PIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNGNGQLGLGS---- 241
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S ++ TP + L+G+ V+ A G+ H+ + + G+VY +G + ++ ++
Sbjct: 242 -----SGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 296
Query: 278 ARRPSLIS 285
P+ IS
Sbjct: 297 QSYPTPIS 304
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 138/320 (43%), Gaps = 56/320 (17%)
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAIT 139
L+ T ++ G N G LG+ + + ++EP R+ L K++ +S G H T
Sbjct: 57 EVLYTTVNNEIFVLGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIACLSYGSGPHIVLAT 115
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
+GE++ WG N+ QLG G ++P LS + A G S+ +T G+V
Sbjct: 116 TEGEVFTWGHNAYSQLGNGTTNHGLVPCYISTN-LSNKQVIEVACGSYHSLVLTSDGEVF 174
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
+WG SG++G G + ++ PR + + C+ V
Sbjct: 175 AWGYNNSGQVGSGS---------TANQPIPRRV-----------------TGCLQNKAVV 208
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
I A +M +++ GE+Y WG N NG LG+GS +P RV
Sbjct: 209 NI----ACGQMCSM--------AVVDAGEVYVWGYNGNGQLGLGSSGNQPTPCRV-AALQ 255
Query: 320 ESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
V +V+CG+ HT ++ EG++ WG +S GQLG GN + +PT +
Sbjct: 256 GIHVQRVACGYAHTLVLTDEGQVYAWG------------ANSYGQLGTGNKSNQSYPTPI 303
Query: 379 NFGENVKALQVSCGFNHTGA 398
+ ++ +C HT A
Sbjct: 304 SVEKDRIIEIAACHSTHTSA 323
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P IS K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPISVEKDRIIEIAACHSTHTSAAKTQGGNVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ +P T+ C +F
Sbjct: 341 --SVTLPHLTRFSCTDDVF 357
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 108/268 (40%), Gaps = 60/268 (22%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ LSG K A L + V T
Sbjct: 62 TVNNEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIACLSYGSGPHIVLATTE 117
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACID 254
G+V +WG +LG+G + L P I L +V A G HS
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGL---------VPCYISTNLSNKQVIEVACGSYHSL--- 165
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
L S GE++ WG N +G +G GS P RV
Sbjct: 166 ---------------------------VLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRV 198
Query: 315 QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
G V ++CG + A+ + G++ WG+ G+ GQLG G+ +
Sbjct: 199 TGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNGN------------GQLGLGSSGNQP 246
Query: 374 HPTIVNFGENVKALQVSCGFNHTGALLE 401
P V + + +V+CG+ HT L +
Sbjct: 247 TPCRVAALQGIHVQRVACGYAHTLVLTD 274
>gi|167517927|ref|XP_001743304.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778403|gb|EDQ92018.1| predicted protein [Monosiga brevicollis MX1]
Length = 850
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 142/371 (38%), Gaps = 44/371 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN LG + + P + + + + +A G T + G +++ G + Q
Sbjct: 4 WGNTRDAELGYVANQPVESPQINTLLSRLNPTHIALGQRGTFVIDGEGRLWSCGSHTRPQ 63
Query: 103 LGISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+ +G++ L + GL+ E + H A+T+ GE+Y WG NS QLG
Sbjct: 64 NDVKSFLGHAESSLALVEGLESERFIQVSATSHVLAVTLQGEVYSWGSNSYKQLGRDGVN 123
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P K+ L G Q G S AV+ G + +WG GG GRLGHG +
Sbjct: 124 NR----PMKITALEGEEVVQVCAGGHHSAAVSKAGNLYTWGRGGYGRLGHGTSDDV---- 175
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
R+ EG++V A G HS C+ E+G +Y FGD K+ + R
Sbjct: 176 ----NVPTRVAAFPEGIRVVHVACGLGDAHSMCVTEDGHIYSFGDGDFGKLGHGTNDRRR 231
Query: 280 RPSLIS------------------GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+P I G LY WG LG G+ V+ P +
Sbjct: 232 QPERIDFDIVKVVCGSSTSAAISLSGALYVWGGGRRYRLGTGTEAVIWQPRTAHALNTHK 291
Query: 322 PVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF- 380
VD A G++ WG HG D G++ I P ++
Sbjct: 292 VVDCALSSEHGVAVTDRGEVFVWG-ANDHGQLGADA---------GSEKTIIAPRVIKLP 341
Query: 381 GENVKALQVSC 391
GE +V C
Sbjct: 342 GEFPAVNRVHC 352
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 17/109 (15%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 345
GE+Y+WGSN LG ++ + P ++ E V QV G H+AA+S+ G + TWG
Sbjct: 104 GEVYSWGSNSYKQLGRDGVN--NRPMKITALEGEEVV-QVCAGGHHSAAVSKAGNLYTWG 160
Query: 346 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT-IVNFGENVKALQVSCGF 393
GG G+LGHG D PT + F E ++ + V+CG
Sbjct: 161 RGGY------------GRLGHGTSDDVNVPTRVAAFPEGIRVVHVACGL 197
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G RLG G+ W+P A H + A H + +T+ G V+ G ND G
Sbjct: 261 VWGGGRRYRLGTGTEAVIWQPRTAHALNTHKVVDCALSSEHGVAVTDRGEVFVWGANDHG 320
Query: 102 QLG 104
QLG
Sbjct: 321 QLG 323
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.137 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,932,105,748
Number of Sequences: 23463169
Number of extensions: 314394962
Number of successful extensions: 889714
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4133
Number of HSP's successfully gapped in prelim test: 1553
Number of HSP's that attempted gapping in prelim test: 767338
Number of HSP's gapped (non-prelim): 40644
length of query: 403
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 258
effective length of database: 8,957,035,862
effective search space: 2310915252396
effective search space used: 2310915252396
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)