BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015656
(403 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 174/362 (48%), Gaps = 58/362 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT+ +++G VY+ G DFG
Sbjct: 39 WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 98
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 99 RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 157
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G + WG G G LG G
Sbjct: 158 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 209
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T P + G K+ + A G+ H+ + +
Sbjct: 210 ---TDRLVPERVTSTGGEKMSMVACGWRHTISVSYS------------------------ 242
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEG 339
G LYT+G ++ G LG G ++ P +++ S S + Q+S GW+HT A+ S+G
Sbjct: 243 ------GALYTYGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQISGGWRHTMALTSDG 295
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
K+ WGW + GQ+G GN++D P V F ++ K +QVSCG+ HT A+
Sbjct: 296 KLYGWGW------------NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 343
Query: 400 LE 401
E
Sbjct: 344 TE 345
Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 16/213 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG R P ++ + +ACG HT+ ++ +G +Y G + +GQ
Sbjct: 196 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQ 255
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + L P ++ L + QIS G+ H+ A+T DG+LY WG N GQ+G+G
Sbjct: 256 LGHGD-LEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ + + Q + G+ ++AVT V +WG G +G+LG G+
Sbjct: 315 DQCSPVQVRFPDDQKVV--QVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGE-------- 364
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
S P++I E + V A+ + S+ ID
Sbjct: 365 -SVDRNFPKII---EALSVDGASGQHIESSNID 393
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 167/362 (46%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G E
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V Q++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 154/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V Q++CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQIACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 142 bits (357), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 167/362 (46%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V ++ G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V QV+CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 122 bits (306), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 153/338 (45%), Gaps = 58/338 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A+ACG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
+ EL +GSI V QV+CG +HT+A S G+
Sbjct: 287 KVF--EL------------MGSI-----------------VTQVACGRQHTSAFVPSSGR 315
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
I ++G GG+ GQLG G+ + P V
Sbjct: 316 IYSFGLGGN------------GQLGTGSTSNRKSPFTV 341
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFV--------------------------- 204
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 338
L G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 205 ---LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
G + T+G GG GQLGH + I+P V +++CG HT A
Sbjct: 261 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSA 308
Query: 399 LL 400
+
Sbjct: 309 FV 310
Score = 119 bits (297), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 135/297 (45%), Gaps = 36/297 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LI-----------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
+ S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G + A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 159/319 (49%), Gaps = 40/319 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4112 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 278 ARRP---------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
R +L S G++Y WGSN G LG+G + + P V G
Sbjct: 4280 NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4339
Query: 317 PFSESPVDQVSCGWKHTAA 335
V Q+S G H+AA
Sbjct: 4340 -LQGKNVRQISAGRCHSAA 4357
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 129/246 (52%), Gaps = 14/246 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLISG 286
P+L++G
Sbjct: 4334 PTLVTG 4339
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLIS----------------------GGELYTWGSNENGCLGIG-SIDVLHSPERV 314
A RP LI E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 315 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 344
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDG--- 530
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 320
ELYTWG + G LG G + + P V+
Sbjct: 531 ---------------------------ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DI 560
Query: 321 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
S V +VSCG HT A+S+ W +GG G+LGHG+ P ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVIEA 610
Query: 381 GENVKALQVSCGFNHTGAL 399
+ + +V G + AL
Sbjct: 611 LQGMFIRKVCAGSQSSLAL 629
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 55/276 (19%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
Q+ G + + I +G + G+ S G+LG G + + + T + L G Q +
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 4088
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 4139
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ GF HSA + +G+++ FG+ G++ R LG+G
Sbjct: 4140 SCGFKHSAVVTSDGKLFTFGN----------GDYGR--------------------LGLG 4169
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 363
+ PERV + QV+CG HT A+S + W +G DG G+
Sbjct: 4170 NTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFG--------DGDY--GK 4218
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
LG GN P ++ + +V+CG + AL
Sbjct: 4219 LGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4254
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 159/342 (46%), Gaps = 57/342 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGC 299
+ AAG HS + +G V FG WG N G
Sbjct: 192 LAQVAAGGAHSFALSLSGAV--FG----------------------------WGMNNAGQ 221
Query: 300 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 358
LG+ SP V+ ++ V +SCG +HTA +++ G + T+G G
Sbjct: 222 LGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG----------- 269
Query: 359 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 400
S GQLGH + D ++P V + Q++CG HT A +
Sbjct: 270 -SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 125/244 (51%), Gaps = 8/244 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ +G+LG +S RP A + ++CG H++ + G V+A G GQL
Sbjct: 47 GDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQL 106
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ DG ++ WG+NS GQLGLGK +
Sbjct: 107 GIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKN-S 165
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ IP KV+ L GI Q A G S A++ G WG+ SG+L ++ G
Sbjct: 166 RSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQL------ALSGNKV 219
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + E G+V+ FG + ++ + R P
Sbjct: 220 KEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQ 279
Query: 283 LISG 286
LI G
Sbjct: 280 LIEG 283
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 147/327 (44%), Gaps = 59/327 (18%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
A G H+L L VY+ G N +GQLG + + P I L V +S G HS
Sbjct: 28 ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQS-TERPEPIQALNDLHVDLVSCGKEHS 86
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ G+++ WG S GQLG+G + ++ +PTK++ L+GI Q + G S+A++
Sbjct: 87 VAVCHKGKVFAWGAGSEGQLGIG-EFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSED 145
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V SWG G+LG G+ S S+ P+ +K LEG+ + AAG
Sbjct: 146 GHVFSWGRNSEGQLGLGKNSR--------SQAIPQKVKSLEGIPLAQVAAG--------- 188
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDV---LHSPE 312
G H+ SL G + WGSN +G L + V ++ P
Sbjct: 189 -------------------GTHSFALSLT--GTSFGWGSNRSGQLALSGNKVKEQIYKPH 227
Query: 313 RVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+ G V +SCG++HTA ++ EG++ T+G G S G S GQ G
Sbjct: 228 SI-GALKNLSVIYISCGYEHTAVLTEEGQVFTFG-GNSSGQLQPSPRS--GQRG------ 277
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P ++ G + Q+ C HT A
Sbjct: 278 ---PQLIE-GIGGRVSQIECASYHTIA 300
Score = 95.1 bits (235), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 124/282 (43%), Gaps = 56/282 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HHS + + +Y G NS GQLG + + P P ++ L+ + +
Sbjct: 23 ELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEP--IQALNDLHVDLVS 80
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E SVAV GKV +WGAG G+LG G+ I + P IK L G+K+
Sbjct: 81 CGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEI--------SFMPTKIKALAGIKIIQV 132
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G HS + E+G V ++WG N G LG+G
Sbjct: 133 SCGHYHSLALSEDGHV------------------------------FSWGRNSEGQLGLG 162
Query: 304 SIDVLHS-PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
+ P++V+ P+ QV+ G H+ A+S ++GWG + G
Sbjct: 163 KNSRSQAIPQKVKS-LEGIPLAQVAAGGTHSFALSLTGT-SFGWGSNR----------SG 210
Query: 363 QLG-HGNDV--DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QL GN V P + +N+ + +SCG+ HT L E
Sbjct: 211 QLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTE 252
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G E + P A + ++CG H+L L+E G V++ G N G
Sbjct: 98 WGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEG 157
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ +N P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 158 QLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + I P + L + + G+E + +T G+V ++G SG+L S G
Sbjct: 218 KVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 277
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+LI+ + G +I A + A + G+V G
Sbjct: 278 ---------PQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 312
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 84/197 (42%), Gaps = 39/197 (19%)
Query: 229 PRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG- 286
PR +K G+++ AA+G HS + N RVY GD + ++ + RP I
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71
Query: 287 ---------------------GELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVD 324
G+++ WG+ G LGIG ++ P +++ + +
Sbjct: 72 NDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKA-LAGIKII 130
Query: 325 QVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG-NDVDYIHPTIVNFGE 382
QVSCG H+ A+SE G + +W G +S GQLG G N P V E
Sbjct: 131 QVSCGHYHSLALSEDGHVFSW------------GRNSEGQLGLGKNSRSQAIPQKVKSLE 178
Query: 383 NVKALQVSCGFNHTGAL 399
+ QV+ G H+ AL
Sbjct: 179 GIPLAQVAAGGTHSFAL 195
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2
Length = 4834
Score = 114 bits (286), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4122
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4123 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4181 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4237
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4238 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4268
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4269 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4319
Query: 340 KILTWG 345
K + G
Sbjct: 4320 KPASAG 4325
Score = 108 bits (269), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 3279
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3280 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3323
Score = 102 bits (253), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4242 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4288
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4289 IQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3282
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3283 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 148/353 (41%), Gaps = 81/353 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGEL 289
L+ L+G+KV A G GD A+ ++ G++
Sbjct: 595 MLVAGLKGLKVIDVACG---------------SGD-------------AQTLAVTENGQV 626
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG G
Sbjct: 627 WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 685
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 686 NQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 114/258 (44%), Gaps = 52/258 (20%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + PR I L VK A +HS
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 3055
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3056 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3094
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3095 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3141
Query: 375 PTIVNFGENVKALQVSCG 392
P +V + +QV+CG
Sbjct: 3142 PKMVKVLLGHRVIQVACG 3159
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4010 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4052
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4053 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 4092
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4093 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4139
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 4140 LQGHRVVDIACG 4151
Score = 33.1 bits (74), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLT 87
WG+ D+G+ G G+ +P + E + +ACG +H++ T
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 114 bits (286), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 167/354 (47%), Gaps = 57/354 (16%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL TE G VYATG N+ G
Sbjct: 58 MFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEG 117
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + + + + ++ Q+S G + S+A+T DG L+MWG NS GQ+GL K
Sbjct: 118 QLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGL--K 175
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P +V G + G+ S VT G++ +G +G+LG + +LG
Sbjct: 176 NVSNVCVPQQVTI--GKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQ--LLGN 231
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R TP+L+ E+ +++A G H+ + EN
Sbjct: 232 HR-----TPQLVSEIPEKVIQVACGG-EHTVVLTENA----------------------- 262
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-G 339
+YT+G + G LG+G+ S +V + + +SCG HTA I++ G
Sbjct: 263 --------VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIG 314
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCG 392
+ T+G G HG LG N ++ PT+ NF + L V+CG
Sbjct: 315 LMYTFG-DGRHGKLG---------LGLENFTNHFIPTLCSNFLRFIVKL-VACG 357
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 57/304 (18%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
V +S G HS+ +T + +LYM+G N+ GQLGLG K+A I PT V+ L K AA G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
++ T GG V + G G+LG G ++ F TSE+ K+
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI---------------- 284
K +AG SA + E+GR++++GD + ++ + ++ P +
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202
Query: 285 ----SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 338
+ GELY +G ENG LG+ + L R SE P V QV+CG +HT ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTG 397
+ T+G G GQLG G + + P ++ + +SCG NHT
Sbjct: 261 NAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTA 308
Query: 398 ALLE 401
+ +
Sbjct: 309 LITD 312
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 138/301 (45%), Gaps = 46/301 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4124
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4125 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4182
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4183 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4239
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G
Sbjct: 4240 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---------------------- 4270
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 339
E+YTWG N+ G LG G+ + + P R+ V++V+CG HT A S
Sbjct: 4271 --------EVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTS 4321
Query: 340 K 340
K
Sbjct: 4322 K 4322
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++++ L G K+ A G LH + ++G+VY
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY------------------- 3280
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3281 -----------AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3324
Score = 101 bits (252), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3959 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4016
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4017 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4074
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4075 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4129
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4130 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183
Query: 275 GNHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPE 312
+ + P +L G +YTWG + LG GS D + P
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243
Query: 313 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 371
+VQG V ++ G H +E G++ TW G + GQLG G
Sbjct: 4244 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4290
Query: 372 YIHPTIVNFGENVKALQVSCGFNHTGA 398
P +V + K +V+CG HT A
Sbjct: 4291 IQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 163/349 (46%), Gaps = 53/349 (15%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VY+ G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGD-----------------RAVDKMLFQ-----EGNHARRPSLISGGELY 290
+ + G V+ +GD + ++++ Q E +L G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 349
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3283
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G+G PT+V E K +V+CG +H+ A
Sbjct: 3284 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISG----------------------GELY 290
+ ++G+VY +G ++ H R P L+ G E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
+WGSN+ C ++ V PE P +S KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPTALPGLDS---------KHIVGIACGPAQSFAW 777
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 146/355 (41%), Gaps = 85/355 (23%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N L P + GL
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
L+ L+G+KV A +G + + ENG+V
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQV---------------------------- 627
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGW 346
++WG + G LG G D +P+ ++ + V +V CG + + A++ +G++ +WG
Sbjct: 628 --WSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVIKVRCGSQFSIALTKDGQVYSWGK 684
Query: 347 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G + +LGHG + +P ++ + K + V+ G H AL E
Sbjct: 685 GDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 114/265 (43%), Gaps = 52/265 (19%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + PR I L VK A +HS
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPI--------PRQITALSSYVVKKVA---VHSG---- 3056
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
G HA +L G++++WG ++G LG S P ++
Sbjct: 3057 -------------------GRHAT--ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3095
Query: 316 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
+ ++CG H+AA+ S G++ TWG G G+LGHG++ +
Sbjct: 3096 A-LKTKRIRDIACGSSHSAALTSSGELYTWGLG------------EYGRLGHGDNTTQLK 3142
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P +V + +QV+CG L
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTL 3167
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
+ K P PT + L A G QS A
Sbjct: 747 RVTK--PEPTALPGLDSKHIVGIACGPAQSFA 776
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4011
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A C+
Sbjct: 4012 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCL-------- 4054
Query: 262 FGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
+L S GE+Y+WG E+G LG G+ P ++
Sbjct: 4055 --------------------ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIE 4094
Query: 322 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
VD V+ G H+A ++ G + TWG G G+LGH + D + P +V
Sbjct: 4095 VVD-VAAGGAHSACVTAAGDLYTWGKG------------RYGRLGHSDSEDQLKPKLVEA 4141
Query: 381 GENVKALQVSCG 392
+ + + ++CG
Sbjct: 4142 LQGHRVIDIACG 4153
Score = 32.7 bits (73), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLT 87
WG+ D+G+ G G+ +P + E + +ACG +H++ T
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 134/300 (44%), Gaps = 47/300 (15%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+V++++ G HHS A+ DGEL+ WG N+ GQ+G G A + P P
Sbjct: 114 QGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
TP + L G+ V G+ H+ +L G
Sbjct: 223 TPVRVAALHGMCVNQIVCGYAHTL------------------------------ALTDEG 252
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 345
LY WG+N G LG GS + L SP ++ E ++ +C HT+A G + WG
Sbjct: 253 LLYAWGANTYGQLGTGSKNNLLSPTQIMVE-KERVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 102 bits (253), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 117/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G ++A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L G+ Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+++ E E V ++IAA H SA + G VY++G
Sbjct: 276 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 140/313 (44%), Gaps = 53/313 (16%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P ++K V T + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEAGSIRKACV-FGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAVTG-GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V +T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V A G HS + +G ++ +G ++ G+ A +P+
Sbjct: 127 IKQVIEV-----ACGSHHSMALAADGELFAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV V+Q+
Sbjct: 180 TKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRV-AALHGMCVNQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG ++ GQLG G+ + + PT + E +
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGSKNNLLSPTQI-MVEKERV 286
Query: 387 LQV-SCGFNHTGA 398
+++ +C HT A
Sbjct: 287 IEIAACHSTHTSA 299
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG L P +I K+ V++I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFCCTDDVF 333
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 178/387 (45%), Gaps = 57/387 (14%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 4054 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4111
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ + +++ P + L+ V+ +++G H A+T +GE+Y WG+ +G+LG
Sbjct: 4112 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4170
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 4171 GNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4224
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4225 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4279
Query: 276 NHARRP----------------------SLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
+ + P +L G +YTWG + LG GS+D + P++
Sbjct: 4280 DGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKK 4339
Query: 314 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 372
V + ++ G H A S+ G++ TW G + GQLG G
Sbjct: 4340 VAA-LQGKKIISIATGSLHCVACSDSGEVYTW------------GDNDEGQLGDGTVTAI 4386
Query: 373 IHPTIVNFGENVKALQVSCGFNHTGAL 399
P +V + ++V+CG HT AL
Sbjct: 4387 QRPRLVAALQGKHIVKVTCGSAHTLAL 4413
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 137/296 (46%), Gaps = 46/296 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 3097 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3156
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L + VVQ++ G + A+T DG ++ WG G+LG G
Sbjct: 3157 LGHGDNT-TQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3215
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3216 SEGS--DTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3271
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ I L G +V A G LH + + G+V
Sbjct: 3272 -------RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV-------------------- 3304
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 335
Y WG N++G G G+ V P V G V++V+CG H+ A
Sbjct: 3305 ----------YAWGDNDHGQQGSGNTFVNKKPALVIG-LDAVFVNRVACGSSHSIA 3349
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 134/303 (44%), Gaps = 48/303 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + S+ +ACG AH+ +T +G V G +G+
Sbjct: 4160 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4219
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4220 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4277
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4278 -GSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4334
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P+ + L+G K+ A G LH AC D
Sbjct: 4335 -------RRPKKVAALQGKKIISIATGSLHCVACSD------------------------ 4363
Query: 279 RRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
GE+YTWG N+ G LG G++ + P R+ + +V+CG HT A+S
Sbjct: 4364 -------SGEVYTWGDNDEGQLGDGTVTAIQRP-RLVAALQGKHIVKVTCGSAHTLALST 4415
Query: 339 GKI 341
++
Sbjct: 4416 SQL 4418
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 161/350 (46%), Gaps = 56/350 (16%)
Query: 79 GGAHTLFL-TETGCVYATGLNDFGQLG--ISENIG--YSLEPLRISGLKKEVVQISTGYH 133
GG+ +LF+ ++ G VYA G G+LG ++ N+ + L LR +KK V + +G
Sbjct: 3026 GGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKK--VAVHSGGK 3083
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H+ A+T+DG+++ WG+ +G+LG G + + P VE L + A G S A++
Sbjct: 3084 HALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVEALRAKKIRDVACGSSHSAAIS 3141
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSA 251
G++ +WG G GRLGHG +T++ P+L+ L G +V A G +
Sbjct: 3142 SQGELYTWGLGEYGRLGHGD---------NTTQLKPKLVTALAGRRVVQVACGSRDAQTL 3192
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRP----------------------SLISGGEL 289
+ E+G V+ +GD K+ + P +L GE+
Sbjct: 3193 ALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEV 3252
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGG 348
+TWG + LG G + P+ + G V V+ G H A+++ G++ WG
Sbjct: 3253 WTWGKGDYYRLGHGGDQHVRKPQPIGG-LRGRRVIHVAVGALHCLAVTDAGQVYAWG--- 3308
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
++ H GQ G GN P +V + V +V+CG +H+ A
Sbjct: 3309 ------DNDH---GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3349
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDF 100
WG G Y RLG G+ + R P + A H + AL G AH+L LT G V+A G D+
Sbjct: 692 WGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDY 751
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + N SL+P+ + L + V ++ G S A++ +G+LY WGK + L ++
Sbjct: 752 GKLG-NGNCNGSLQPILVESLPR-VQRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVER 809
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ + +P V L A+ +A++ G+V WG S ++ SS
Sbjct: 810 SVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPASVSS 865
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 15/224 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ RLG G +R P +A E+H ++++ CG +++ +T G + G + +
Sbjct: 640 WGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYAR 699
Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + SL L ++ VV ++ +G HS A+T +G ++ WG G+LG G
Sbjct: 700 LGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNC 759
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILG 219
+ PI VE L + ++ G + SVA++ G++ +WG LGH E S+ G
Sbjct: 760 NGSLQPI--LVESLPRV--QRVFAGSQFSVALSSEGQLYTWGKATC--LGHQLVERSVQG 813
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
PRL+ L+ ++ A H + +G V+ +G
Sbjct: 814 C------SVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWG 851
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 117/269 (43%), Gaps = 56/269 (20%)
Query: 128 ISTGYHHSSAIT---VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ST + ++A + + +WG N QLG G K +KV +PT + +S + A
Sbjct: 2969 VSTSHEEAAAAPEQDLPCTVMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIAG 3026
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G + V+ GKV + G G +GRLG G ++ P + L VK A
Sbjct: 3027 GSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNV---------PLPHQLPVLRQYVVKKVA 3077
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGS 304
+HS G HA +L G++++WG E+G LG G+
Sbjct: 3078 ---VHSG-----------------------GKHAL--ALTLDGKVFSWGEGEDGKLGHGN 3109
Query: 305 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQ 363
L P V+ + V+CG H+AAIS +G++ TWG G G+
Sbjct: 3110 RTTLDKPRLVEA-LRAKKIRDVACGSSHSAAISSQGELYTWGLG------------EYGR 3156
Query: 364 LGHGNDVDYIHPTIVNFGENVKALQVSCG 392
LGHG++ + P +V + +QV+CG
Sbjct: 3157 LGHGDNTTQLKPKLVTALAGRRVVQVACG 3185
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 127/324 (39%), Gaps = 58/324 (17%)
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
ES P + F+ +K +AC L L++ G +Y L EPL
Sbjct: 561 ESAGVPTLSCRFQ---IKQVACCETQMLILSQEGKLYTWRLAK-----------PEAEPL 606
Query: 117 RISGLKKEVVQISTGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
+ + +V IS H H AI + Y WG + +LG G A+ +PTK+
Sbjct: 607 PMEEVAHDVF-ISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARA--VPTKIA 663
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
L + G S A+T GG +L+WG G RLGHG S P L+
Sbjct: 664 ALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGN---------SDDRSLPTLV 714
Query: 233 KEL-EGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI------ 284
L + + V +A +G HS + G V+ +GD K+ N + +P L+
Sbjct: 715 VALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRV 774
Query: 285 --------------SGGELYTWGSNENGCLGIGSIDVL---HSPERVQGPFSESPVDQVS 327
S G+LYTWG + CLG ++ S R+ + V+
Sbjct: 775 QRVFAGSQFSVALSSEGQLYTWG--KATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVA 832
Query: 328 CGWKHTAAI-SEGKILTWGWGGSH 350
H A+ S G++ WG S
Sbjct: 833 VSVAHCLALSSSGEVFGWGRNDSQ 856
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 124/335 (37%), Gaps = 105/335 (31%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG------------------ 185
+Y WG N GQLG G + ++ I PT E LS + Q A G
Sbjct: 4051 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4108
Query: 186 --------------------------FEQSVAVTGGGK----------VLSWGAGGSGRL 209
F + VAV GGK V +WG G G+L
Sbjct: 4109 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 4168
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S P+L++ L G+ V A G HSA I +G V +G +
Sbjct: 4169 GHGNRMSY---------DRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4219
Query: 270 MLFQEGNHARRPSLISG------------------------GELYTWGSNENGCLGIGSI 305
+ + RP L+ +++WG + G LG G
Sbjct: 4220 LGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4279
Query: 306 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 364
D P +++ + V +V CG + + A+++ G + TWG G H +L
Sbjct: 4280 DGCKLPYKIES-LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFH------------RL 4326
Query: 365 GHGNDVDYI-HPTIVNFGENVKALQVSCGFNHTGA 398
GHG+ VD++ P V + K + ++ G H A
Sbjct: 4327 GHGS-VDHVRRPKKVAALQGKKIISIATGSLHCVA 4360
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 56/118 (47%), Gaps = 20/118 (16%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQ---VSCGWKHTAAIS-EGKI 341
G++Y G NG LG+G V H+ P Q P V + V G KH A++ +GK+
Sbjct: 3038 GKVYACGEGTNGRLGLG---VTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKV 3094
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+WG G EDG +LGHGN P +V K V+CG +H+ A+
Sbjct: 3095 FSWGEG-------EDG-----KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAI 3140
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Query: 290 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 348
Y+WG+ E+ LG G P ++ + V V CG ++AAI+ G +LTWG
Sbjct: 638 YSWGTGEDHRLGHGDTHARAVPTKIAA-LEQHCVQSVYCGCSYSAAITCGGNLLTWG--- 693
Query: 349 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 378
GT++ +LGHGN D PT+V
Sbjct: 694 -RGTYA--------RLGHGNSDDRSLPTLV 714
>sp|Q80YD6|SRGEF_MOUSE Secretion-regulating guanine nucleotide exchange factor OS=Mus
musculus GN=Sergef PE=2 SV=2
Length = 464
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 176/411 (42%), Gaps = 79/411 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG E + P S F + +K++ GG H+ +T+ G ++ GLN G
Sbjct: 20 WGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLNKDG 79
Query: 102 QLGISENIGYSLEPLRISGLKK----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG +G++ E LR + K + Q++ G+ + +T G++ G N+ GQLG+
Sbjct: 80 QLG----LGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGV 135
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSG-RLGHGQE 214
K + +P +ECL AA G ++A T G V WG G SG RL GQ
Sbjct: 136 PHGPRKCV-VPQAIECLREKVVCVAA-GLRHALATTATGSVFQWGTGLASSGRRLCPGQN 193
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--------DRA 266
+ FL + P + LE A AG HSA + + G +Y++G RA
Sbjct: 194 LPL--FLTAKE---PSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLASRA 248
Query: 267 VDKMLFQ--EGNHARRPSLIS-------------GGELYTWGSNENGCLGIGSIDVLHSP 311
V L Q E ++ + + + G+++TWG + G LG L P
Sbjct: 249 VFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLG----RRLEPP 304
Query: 312 E-----------RVQGPFSESP--------VDQVSCGWKHTAAISEGKILTWGWGGSHGT 352
E QGP + P ++SCG +H A+ K +WGW
Sbjct: 305 EAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIRDKCCSWGW------ 358
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGALLE 401
+ G G G + + PT V + L V CG H+ A+ +
Sbjct: 359 ------NEHGMCGDGTESNVWTPTPVQALPPSPSRLLLVGCGAGHSLAVCQ 403
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 135/289 (46%), Gaps = 50/289 (17%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGK 149
++A G N +GQLG+ L P ++S + + ++ G HS+ +T G+L++ G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVFL-PQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGL 75
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N +GQLGLG +V+ T + L G +Q A G++ ++ +T G+VLS G+ G+L
Sbjct: 76 NKDGQLGLG-HTEEVLRF-TICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQL 133
Query: 210 G--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD--R 265
G HG ++ P+ I+ L KV AAG H+ G V+ +G
Sbjct: 134 GVPHGPRKCVV----------PQAIECLR-EKVVCVAAGLRHALATTATGSVFQWGTGLA 182
Query: 266 AVDKMLFQEGN-----HARRPSLISG----------------------GELYTWGSNENG 298
+ + L N A+ PS ++G GELY WG N++G
Sbjct: 183 SSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHG 242
Query: 299 CLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE-GKILTWG 345
L ++ L P+R++ F + V V GW H A +E GK+ TWG
Sbjct: 243 QLASRAV-FLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWG 290
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 101/276 (36%), Gaps = 63/276 (22%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S ++ L+ WG NS GQLGLG K +P C +G K G S VT
Sbjct: 8 SETVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCI-KSVTGGGGHSAVVTD 66
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
GG + G G+LG G +L F + K L G ++ A G+ + +
Sbjct: 67 GGDLFVCGLNKDGQLGLGHTEEVLRFT---------ICKPLRGCPIRQVACGWDFTIMLT 117
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV 314
E G+V G A G + V H P +
Sbjct: 118 EKGQVLSCGSNA-----------------------------------FGQLGVPHGPRKC 142
Query: 315 QGPFS-ESPVDQVSC---GWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 369
P + E ++V C G +H A + G + WG G + SSG +L G +
Sbjct: 143 VVPQAIECLREKVVCVAAGLRHALATTATGSVFQWGTGLA---------SSGRRLCPGQN 193
Query: 370 VDYI----HPTIVNFGENVKALQVSCGFNHTGALLE 401
+ P+ V EN A+ G +H+ +L +
Sbjct: 194 LPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTD 229
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 108 bits (271), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + + P R++G K VV I+ G A+ GE+Y+WG N NGQLGLG
Sbjct: 183 QVGSGSTVNQPI-PRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN 241
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 242 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 293
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y + E + + ++IAA H SA + G VY++G
Sbjct: 294 --KSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 114/226 (50%), Gaps = 16/226 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
+ G G LGLG ++S P + + L+ G G H + T G V+ G N +
Sbjct: 69 VLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAY 128
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG + + L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G
Sbjct: 129 SQLG-NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSG 187
Query: 159 KKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ PIP +V CL A G +AV G+V WG G+G+LG G
Sbjct: 188 STVNQ--PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG----- 240
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S ++ TP + L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 241 ----NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 154/368 (41%), Gaps = 67/368 (18%)
Query: 45 NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
+GD G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 9 SGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
G N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+
Sbjct: 69 VLGTNCCGCLGLGD-VQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNA 127
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QLG G ++P LS + A G S+ +T G+V +WG SG++G
Sbjct: 128 YSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G + ++ PR + + C+ V I A +M
Sbjct: 187 GS---------TVNQPIPRRV-----------------TGCLQNKVVVTI----ACGQMC 216
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 331
+++ GE+Y WG N NG LG+G+ +P RV V +V+CG+
Sbjct: 217 CM--------AVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRV-AALQGIRVQRVACGYA 267
Query: 332 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 390
HT ++ EG++ WG +S GQLG GN + +PT V ++ +
Sbjct: 268 HTLVLTDEGQVYAWG------------ANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 315
Query: 391 CGFNHTGA 398
C HT A
Sbjct: 316 CHSTHTSA 323
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 110/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ L+G K A L + V T
Sbjct: 62 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLNG--KKIACLSYGSGPHIVLATTE 117
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSL---- 165
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 166 --------------------------VLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG A+ + G++ WG+ G+ GQLG GN +
Sbjct: 200 GCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLGLGNSGNQPT 247
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTD 274
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 108 bits (271), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + + P R++G K VV I+ G A+ GE+Y+WG N NGQLGLG
Sbjct: 183 QVGSGSTVNQPI-PRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN 241
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 242 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 293
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y + E + + ++IAA H SA + G VY++G
Sbjct: 294 --KSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 114/226 (50%), Gaps = 16/226 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
+ G G LGLG ++S P + + L+ G G H + T G V+ G N +
Sbjct: 69 VLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAY 128
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG + + L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G
Sbjct: 129 SQLG-NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSG 187
Query: 159 KKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ PIP +V CL A G +AV G+V WG G+G+LG G
Sbjct: 188 STVNQ--PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG----- 240
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S ++ TP + L+G++V+ A G+ H+ + + G+VY +G
Sbjct: 241 ----NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 154/368 (41%), Gaps = 67/368 (18%)
Query: 45 NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
+GD G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 9 SGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
G N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+
Sbjct: 69 VLGTNCCGCLGLGD-VQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNA 127
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QLG G ++P LS + A G S+ +T G+V +WG SG++G
Sbjct: 128 YSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G + ++ PR + + C+ V I A +M
Sbjct: 187 GS---------TVNQPIPRRV-----------------TGCLQNKVVVTI----ACGQMC 216
Query: 272 FQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 331
+++ GE+Y WG N NG LG+G+ +P RV V +V+CG+
Sbjct: 217 CM--------AVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRV-AALQGIRVQRVACGYA 267
Query: 332 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 390
HT ++ EG++ WG +S GQLG GN + +PT V ++ +
Sbjct: 268 HTLVLTDEGQVYAWG------------ANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 315
Query: 391 CGFNHTGA 398
C HT A
Sbjct: 316 CHSTHTSA 323
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 110/267 (41%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N G LGLG + + P +++ L+G K A L + V T
Sbjct: 62 TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLNG--KKIACLSYGSGPHIVLATTE 117
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSL---- 165
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 166 --------------------------VLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG A+ + G++ WG+ G+ GQLG GN +
Sbjct: 200 GCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN------------GQLGLGNSGNQPT 247
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTD 274
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 108 bits (271), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 140/309 (45%), Gaps = 42/309 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L + G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA------LSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGK 340
L+ ER+ G V Q+ CG HT A + G+
Sbjct: 281 LV---------------------------ERIDG-----LVSQIDCGSYHTLAYVHTTGQ 308
Query: 341 ILTWGWGGS 349
++++G G S
Sbjct: 309 VVSFGHGPS 317
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 123/282 (43%), Gaps = 56/282 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L +K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIG 303
+ G HS + ++ +V ++WG N +G LG+G
Sbjct: 134 SCGHYHSLALSKDSQV------------------------------FSWGKNSHGQLGLG 163
Query: 304 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
SP+RV+ P+ QV+ G H+ A+S ++GWG +S G
Sbjct: 164 KEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLCGT-SFGWGS----------NSAG 211
Query: 363 QL---GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QL G V P V +N+ + +SCG HT L +
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQ 253
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ +I + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 72.0 bits (175), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ G + G N G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAG 211
Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N+ S +PL + LK VV IS G H++ +T DG+++ +G N +GQLG
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
K P VE + G+ ++ + V G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 108 bits (270), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 115/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++G K V+ I+ G S A+ GE+Y+WG N NGQLGLG
Sbjct: 183 QVGSGSTANQPI-PRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS 241
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G++ +WGA G+LG G
Sbjct: 242 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGN------ 293
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y ++ E + + ++IAA H SA + G VY++G
Sbjct: 294 --KSNQSYPTPVVVEKDRI-IEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 115/219 (52%), Gaps = 16/219 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG+G ++S P + + +L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++ TP + L+G++V+ A G+ H+ + + G++Y +G
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Score = 92.0 bits (227), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 145/348 (41%), Gaps = 62/348 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + I ++E
Sbjct: 30 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQSTIE 88
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T DGE++ WG N+ QLG G ++P
Sbjct: 89 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 149 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198
Query: 233 K-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYT 291
L+ V A G + S +++ GE+Y
Sbjct: 199 TGCLQNKVVMNIACGQMCSM------------------------------AVVDTGEVYV 228
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSH 350
WG N NG LG+GS +P RV V +V+CG+ HT ++ EG+I WG
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQIYAWG----- 282
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 283 -------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 323
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHHTHFCCTDDVF 357
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 113/267 (42%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N +G LG+G + + P +++ L+G K A+L + V T
Sbjct: 62 TVNDEIFVLGTNCSGCLGVGDIQSTIEP--RRLDSLTG--KKIASLSYGSGPHIVLATTD 117
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLV--- 166
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 167 ---------------------------LTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG + A+ + G++ WG+ G+ GQLG G+ +
Sbjct: 200 GCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGN------------GQLGLGSSGNQPT 247
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTD 274
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 108 bits (269), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 115/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++G K V+ I+ G S A+ GE+Y+WG N NGQLGLG
Sbjct: 183 QVGSGSTANQPI-PRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS 241
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G++ +WGA G+LG G
Sbjct: 242 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGN------ 293
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y ++ E + + ++IAA H SA + G VY++G
Sbjct: 294 --KSNQSYPTPVVVEKDRI-IEIAACHSAHTSAAKSQGGHVYMWG 335
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 115/219 (52%), Gaps = 16/219 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG+G ++S P + + +L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++ TP + L+G++V+ A G+ H+ + + G++Y +G
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 145/348 (41%), Gaps = 62/348 (17%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + I ++E
Sbjct: 30 KWPIFSLCSEEELQLIRQACVFGTAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQSTIE 88
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T DGE++ WG N+ QLG G ++P
Sbjct: 89 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 149 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198
Query: 233 K-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYT 291
L+ V A G + S +++ GE+Y
Sbjct: 199 TGCLQNKVVMSIACGQMCSM------------------------------AVVDTGEVYV 228
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSH 350
WG N NG LG+GS +P RV V +V+CG+ HT ++ EG+I WG
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQIYAWG----- 282
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
+S GQLG GN + +PT V ++ +C HT A
Sbjct: 283 -------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 323
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 113/267 (42%), Gaps = 58/267 (21%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
TV+ E+++ G N +G LG+G + + P +++ L+G K A+L + V T
Sbjct: 62 TVNDEIFVLGTNCSGCLGVGDIQSTIEP--RRLDSLTG--KKIASLSYGSGPHIVLATTD 117
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG +LG+G + L ++ + + + E+ A G HS
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLV--- 166
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQ 315
L S GE++ WG N +G +G GS P RV
Sbjct: 167 ---------------------------LTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199
Query: 316 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
G V ++CG + A+ + G++ WG+ G+ GQLG G+ +
Sbjct: 200 GCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGN------------GQLGLGSSGNQPT 247
Query: 375 PTIVNFGENVKALQVSCGFNHTGALLE 401
P V + ++ +V+CG+ HT L +
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTD 274
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A + G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFCCTDDVF 357
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 108 bits (269), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 139/300 (46%), Gaps = 47/300 (15%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P P
Sbjct: 114 QGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGG 287
TP V++AA LHS C+++ + G +A +L G
Sbjct: 223 TP----------VRVAA---LHSVCVNQ----IVCG-------------YAHTLALTDEG 252
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 345
LY WG+N G LG G+ + L SP + E V+ +C HT+A G + WG
Sbjct: 253 LLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 137/312 (43%), Gaps = 51/312 (16%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 GLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--------- 282
IK++ V A G HS + +G V+ +G ++ G+ A +P+
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 179
Query: 283 ----------------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 326
++ GE+Y WG N NG LG+G+ +P RV S V+Q+
Sbjct: 180 IKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQI 238
Query: 327 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 386
CG+ HT A+++ +L + WG ++ GQLG GN + + P + +
Sbjct: 239 VCGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHIMVEKERVV 287
Query: 387 LQVSCGFNHTGA 398
+C HT A
Sbjct: 288 EIAACHSAHTSA 299
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 160/358 (44%), Gaps = 57/358 (15%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL TE G VYA G N+ G
Sbjct: 58 MFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEG 117
Query: 102 QLGISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + S + ++++ Q+S G + S+A+T DGEL+MWG NS GQ+GL
Sbjct: 118 QLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENV 177
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+P V G + G+ S VT G++ ++G G+LG L
Sbjct: 178 TNVCVPQQVTV----GKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLG-------LPN 226
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ P+ + + G V++A G G + ++AV
Sbjct: 227 QLLVNHRMPQPVPGIPGKVVQVACGG----------GHTVVLTEKAV------------- 263
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-G 339
YT+G + G LG+G+ S + + + ++CG HTA I++ G
Sbjct: 264 ---------YTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMG 314
Query: 340 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCGFNHT 396
+ T+G G HG LG N + PT+ NF + L VSCG HT
Sbjct: 315 LMYTFG-DGRHGKLG---------LGLENSTNQFIPTLCSNFLRFIVQL-VSCGGCHT 361
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 146/325 (44%), Gaps = 52/325 (16%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + +S G H++ +T + +LYM+G N+ GQLGLG
Sbjct: 17 FGKTQFAENI-----PSKFWFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGS 71
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K+ + PT V+ L K AA G ++ T GGKV + G G+LG G
Sbjct: 72 KS--TVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERST 129
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F + + R IK+L +AG SA + E+G ++++GD + ++ + +
Sbjct: 130 FHLISFFTSQRKIKQL--------SAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVC 181
Query: 280 RPSLI--------------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 319
P + + G+LYT+G E G LG+ + +++ R+ P
Sbjct: 182 VPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVN--HRMPQPVP 239
Query: 320 ESP--VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPT 376
P V QV+CG HT ++E + T+G G GQLG G + + P
Sbjct: 240 GIPGKVVQVACGGGHTVVLTEKAVYTFGLG------------QFGQLGLGTFLFETSVPK 287
Query: 377 IVNFGENVKALQVSCGFNHTGALLE 401
+ ++ K ++CG NHT + +
Sbjct: 288 AIEHIKDQKISFIACGENHTALITD 312
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 105 bits (261), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 170/385 (44%), Gaps = 57/385 (14%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 28 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 85
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 86 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 145
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G + G+
Sbjct: 146 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 201
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E +L RS P+ + + +++A G
Sbjct: 202 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGG-- 252
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVL 308
G + ++ V Y +G + G LG+G+
Sbjct: 253 --------GHTVVLTEKVV----------------------YAFGLGQFGQLGLGTFLFE 282
Query: 309 HSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 367
S ++ + + +SCG HTA ++E G + T+G G HG LG
Sbjct: 283 TSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG-DGRHGKLG---------LGME 332
Query: 368 NDVDYIHPTIVNFGENVKALQVSCG 392
N + PT+ + ++CG
Sbjct: 333 NFTNQFFPTLCSNFLRFAVQLIACG 357
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 158/340 (46%), Gaps = 57/340 (16%)
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
+ +TG V+ FG+ +ENI P + + +S G H++ +T + +L
Sbjct: 7 LVPDTGAVFT-----FGKTKFAENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKL 56
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
YM+G N+ GQLGLG KAA I PT ++ L K AA G ++ T G V + G
Sbjct: 57 YMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGN 114
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LG G F + +TP +K +AG SA + E+G+++++GD
Sbjct: 115 NEGQLGLGDTDDRDTFHQIVF-FTP-------ADTIKQLSAGANTSAALTEDGKLFMWGD 166
Query: 265 RAVDKMLFQEGNHARRPSLIS--------------------GGELYTWGSNENGCLGIGS 304
+ ++ ++ ++ P ++ GELYT+G ENG LG+ +
Sbjct: 167 NSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPN 226
Query: 305 IDVLH--SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 362
+++ SP+RV G E V QV+CG HT ++E + +G G G
Sbjct: 227 ELLMNHRSPQRVLG-IPER-VIQVACGGGHTVVLTEKVVYAFGLG------------QFG 272
Query: 363 QLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
QLG G + + P I+ ++ K +SCG NHT + E
Sbjct: 273 QLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 312
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 51/245 (20%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E + VTG K+ +G+ G+LG G +++I+ P IK L+ KVK+AA
Sbjct: 43 GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAA 93
Query: 245 AGFLHSACIDENGRVYIFG-------------DRAV--DKMLFQEGNHARRPS------- 282
G H+ + G VY G DR + F + ++ S
Sbjct: 94 CGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSA 153
Query: 283 -LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 340
L G+L+ WG N G +G+ + P V P+ +SCG+ H+A ++ +G+
Sbjct: 154 ALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT---VGKPISWISCGYYHSAFVTMDGE 210
Query: 341 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHTGA 398
+ T+G G+LG N++ H P V G + +QV+CG HT
Sbjct: 211 LYTFG------------EPENGKLGLPNELLMNHRSPQRV-LGIPERVIQVACGGGHTVV 257
Query: 399 LLEYV 403
L E V
Sbjct: 258 LTEKV 262
Score = 41.2 bits (95), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 319 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 364
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 101 bits (252), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 154/339 (45%), Gaps = 43/339 (12%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK------EVVQ 127
+A+ACG H L L+ +G + A G N FGQ G +G+S RI+ L + + +
Sbjct: 779 RAIACGAEHILVLSSSGQLSAWGGNRFGQCG----VGHS---FRIANLHQVDGDWPAIEK 831
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
I+ G HS+ I DG L+ +G GQLG G + +PT+V L T Q A G
Sbjct: 832 IACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICKVT-QIACGRA 890
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+V +T G+VL G+G G++G + ++ +TP + L +V+ A +
Sbjct: 891 HTVVLTDTGRVLVCGSGSYGQMGVDDD------IKKVFAFTPLPLGPL---RVRDIATHY 941
Query: 248 LHSACIDENGRVYIFGDRAVD-KMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSID 306
HS CI E+ RV+ +G + KM R L + + + + NG +++
Sbjct: 942 YHSICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPRVNLN 1001
Query: 307 VLHSPERVQ------GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHS 359
+ R F + + V+CG H+A I SEG + TWG G +
Sbjct: 1002 LPAEIPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDY--------- 1052
Query: 360 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
QLGHGN + + P V K + VS G NHT A
Sbjct: 1053 ---QLGHGNKNERMEPHQVFEPNGAKWVNVSLGNNHTIA 1088
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 136/349 (38%), Gaps = 95/349 (27%)
Query: 43 WGNGDYGRLGLG---------SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WG +G+ G+G ++ W A EK +ACG H+ F+ G ++
Sbjct: 800 WGGNRFGQCGVGHSFRIANLHQVDGDW-----PAIEK-----IACGQFHSAFICSDGSLW 849
Query: 94 ATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
G +GQLG N L P R++GL +V QI+ G H+ +T G + + G S
Sbjct: 850 TFGWGVWGQLGHGGRNNSNQLVPTRVNGLICKVTQIACGRAHTVVLTDTGRVLVCGSGSY 909
Query: 153 GQLGLGKKAAKVI---PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG---- 205
GQ+G+ KV P+P L + + A + S+ +T +V WG
Sbjct: 910 GQMGVDDDIKKVFAFTPLP-----LGPLRVRDIATHYYHSICITEDNRVFEWGRNPQELK 964
Query: 206 ----------SGRLGHGQESSILGFLRSTSEYTPRL--------------IKE----LEG 237
S +L + ++ S ST+ TPR+ ++E L+G
Sbjct: 965 MRMFVMKKIRSAQLKNTEDPSSPS--PSTNGSTPRVNLNLPAEIPREDLGLREVKHFLDG 1022
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNEN 297
V + A G HSA I S G LYTWG +
Sbjct: 1023 NIVSV-ACGLSHSALI------------------------------TSEGTLYTWGKGLD 1051
Query: 298 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWG 345
LG G+ + P +V P V+ VS G HT A+ +G + WG
Sbjct: 1052 YQLGHGNKNERMEPHQVFEPNGAKWVN-VSLGNNHTIASTDDGSVFAWG 1099
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 18/122 (14%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 341
L S G+L WG N G G+G + + +V G + +++++CG H+A I S+G +
Sbjct: 791 LSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDGDWPA--IEKIACGQFHSAFICSDGSL 848
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHG--NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
T+GWG GQLGHG N+ + + PT VN G K Q++CG HT L
Sbjct: 849 WTFGWG------------VWGQLGHGGRNNSNQLVPTRVN-GLICKVTQIACGRAHTVVL 895
Query: 400 LE 401
+
Sbjct: 896 TD 897
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
L +V ++ G HS+ IT +G LY WGK + QLG G K ++ P +V +G
Sbjct: 1020 LDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERM--EPHQVFEPNGAKWV 1077
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+LG ++A T G V +WG G+ G
Sbjct: 1078 NVSLGNNHTIASTDDGSVFAWGKNDFGQCG 1107
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI---SGLKKEVVQI 128
++ ++ACG +H+ +T G +Y G QLG N +EP ++ +G K V +
Sbjct: 1023 NIVSVACGLSHSALITSEGTLYTWGKGLDYQLG-HGNKNERMEPHQVFEPNGAK--WVNV 1079
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
S G +H+ A T DG ++ WGKN GQ G+ K
Sbjct: 1080 SLGNNHTIASTDDGSVFAWGKNDFGQCGVLTK 1111
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 163/365 (44%), Gaps = 49/365 (13%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
+G+LG G S +P + +++ ++CG T+ +T+ G +YA G + +G +G+ +
Sbjct: 403 HGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDK 462
Query: 108 NIGYS-LEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
G LEP++++ L V Q+S G +H +T + E+Y WG G+LGL +
Sbjct: 463 VAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYY- 521
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGF---- 220
P KV+ + G + + +T GKVL+ G +LG Q S I+
Sbjct: 522 -TPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYH 580
Query: 221 -LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ T+ +T L K+L K++ A G H+A IDE GR
Sbjct: 581 EVPYTTSFT--LAKQLSFYKIRTIAPGKTHTAAIDERGR--------------------- 617
Query: 280 RPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISE 338
L T+G N+ G LG+G+ + GP V +VSCG + T AA +
Sbjct: 618 ---------LLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDD 668
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
I WG GG +G + + + HG+D+ P + FG +SC HT
Sbjct: 669 NHIFAWGNGG-NGRLA----MTPTERPHGSDICTSWPRPI-FGSLHHVPDLSCRGWHTIL 722
Query: 399 LLEYV 403
++E V
Sbjct: 723 IVEKV 727
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 89/181 (49%), Gaps = 14/181 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+YGRLGL S E + P + + A+ CG T LT++G V A GLN+F +
Sbjct: 504 WGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNK 563
Query: 103 LGISENI-------GYSLEPLRIS-GLKKE-----VVQISTGYHHSSAITVDGELYMWGK 149
LG+++ + Y P S L K+ + I+ G H++AI G L +G
Sbjct: 564 LGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGC 623
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N GQLG+G K + I L G + + G E ++A T + +WG GG+GRL
Sbjct: 624 NKCGQLGVG-NYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 682
Query: 210 G 210
Sbjct: 683 A 683
Score = 35.4 bits (80), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 17/118 (14%)
Query: 288 ELYTW-----GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKI 341
ELYTW G+ +G LG G P+ V+ + QVSCG T ++ EG++
Sbjct: 389 ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEK-LQGKAIRQVSCGDDFTVCVTDEGQL 447
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+G +G D + G +V + P +NF + QVSCG NH L
Sbjct: 448 YAFG-SDYYGCMGVDKVA-------GPEV--LEPMQLNFFLSNPVEQVSCGDNHVVVL 495
Score = 35.4 bits (80), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 71/187 (37%), Gaps = 43/187 (22%)
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH------------ARRP 281
E++ + + +HS C+D++ D +D+ L ++ +RP
Sbjct: 271 EVDSSQYSLELIQMVHS-CLDQDPEQRPTADELLDRPLLRKRRREMEEKVTLLNAPTKRP 329
Query: 282 ----------SLISG--GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 329
++++ E+Y WG ++ +P+++ S QV G
Sbjct: 330 RSSTVTEAPIAVVTSRTSEVYVWGGGKS------------TPQKLDVIKSGCSARQVCAG 377
Query: 330 WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 389
H A ++ K L + W G G GQLGHG+ Y P V + QV
Sbjct: 378 NTHFAVVTVEKEL-YTWVNMQG-----GTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQV 431
Query: 390 SCGFNHT 396
SCG + T
Sbjct: 432 SCGDDFT 438
Score = 32.3 bits (72), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEK------HSLKALACGGAHTLFLTE 88
WGNG GRL + E +C+++ + H + L+C G HT+ + E
Sbjct: 674 WGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSCRGWHTILIVE 725
>sp|Q9UGK8|SRGEF_HUMAN Secretion-regulating guanine nucleotide exchange factor OS=Homo
sapiens GN=SERGEF PE=1 SV=2
Length = 458
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 166/401 (41%), Gaps = 71/401 (17%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI- 105
YG+LGLG E P + F K S++ + GG H+ +T+ G ++ GLN GQLG+
Sbjct: 25 YGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLG 84
Query: 106 -SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV 164
+E+I Y P + S + Q++ G+ + +T +G++ G NS GQLG+ +
Sbjct: 85 HTEDIPY-FTPCK-SLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRC 142
Query: 165 IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG---RLGHGQESSILGFL 221
+ +P +E L A G +VA T G V WG G + RL GQ L
Sbjct: 143 V-VPQAIE-LHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQ---TLPLF 197
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD----------------R 265
+ E P + LE K AG HSA + + G VY++G +
Sbjct: 198 FTAKE--PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQ 255
Query: 266 AVDKMLFQEGNHARRPSLISG----------GELYTWGSNENGCLG----------IGSI 305
++ FQ + + ++ SG G+++TWG + G LG +
Sbjct: 256 KIEAHCFQ---NEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQ 312
Query: 306 DVLHSPERVQGPFSESP-----VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 360
D R SP +VSCG +H AI G +WGW +
Sbjct: 313 DSFLPCSRPPNSMPSSPHCLTGATEVSCGSEHNLAIIGGVCYSWGW------------NE 360
Query: 361 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G G G + + P V + L V CG H+ AL +
Sbjct: 361 HGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAGHSLALCQ 401
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 131/285 (45%), Gaps = 54/285 (18%)
Query: 98 NDFGQLGI--SENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNG 153
N +GQLG+ E++ L P +++ K V +I+ G HS+ +T G+L++ G N +G
Sbjct: 23 NSYGQLGLGHKEDV---LLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDG 79
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--H 211
QLGLG + IP T + L G +Q A G++ ++ +T G+VLS G+ G+LG H
Sbjct: 80 QLGLGH--TEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPH 137
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD------- 264
G ++ P+ I EL KV AAG H+ +G V+ +G
Sbjct: 138 GPRRCVV----------PQAI-ELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGR 186
Query: 265 RAVDKMLFQEGNHARRPSLISG----------------------GELYTWGSNENGCLGI 302
R A+ PS ++G GE+Y WGSN++G L
Sbjct: 187 RLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLA- 245
Query: 303 GSIDVLHSPERVQG-PFSESPVDQVSCGWKHTAAISE-GKILTWG 345
L P++++ F V + GW H A +E GK+ TWG
Sbjct: 246 NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWG 290
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 144/355 (40%), Gaps = 60/355 (16%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYA--TGLND 99
G+ +G+LG+ R VV A E H K +A G H + T +G V+ TGL
Sbjct: 126 GSNSFGQLGVPHGPRRC--VVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLAS 183
Query: 100 FGQL---GISENIGYSL-EPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+ G + + ++ EP R++GL+ + + + G HS+++T GE+Y+WG N +GQ
Sbjct: 184 CGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQ 243
Query: 155 LGLGKKAAKVIPIPTKVE--CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
L A +P+P K+E C G+ VA T GK+ +WG G+LG
Sbjct: 244 LA---NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRK 300
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
E+ L + P G +C E+ I
Sbjct: 301 LETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGSEHNLAII----------- 349
Query: 273 QEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 332
GG Y+WG NE+G G G+ + +P+ VQ S S + V CG H
Sbjct: 350 -------------GGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGL-LVGCGAGH 395
Query: 333 TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 387
+ A+ + +H +D V Y+ P + E+ KA+
Sbjct: 396 SLALCQLP--------AHPALVQD-----------PKVTYLSPDAIEDTESQKAM 431
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 104/268 (38%), Gaps = 47/268 (17%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P + E + G H+ LT+ G VY G N GQL + + P +I
Sbjct: 202 EPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQL--ANEAAFLPVPQKIEA 259
Query: 121 ---LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---------KKAAKVIP-- 166
++V I +G+ H A T G+++ WG+ GQLG +K +P
Sbjct: 260 HCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCS 319
Query: 167 -----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+P+ CL+G + + G E ++A+ GG SWG G G G E+++
Sbjct: 320 RPPNSMPSSPHCLTG--ATEVSCGSEHNLAIIGG-VCYSWGWNEHGMCGDGTEANV---- 372
Query: 222 RSTSEYTPRLIKEL---EGVKVKIAAAGFL-------HSACIDENGRVYIFGDRAVD--- 268
+ P+ ++ L G+ V A L H A + + Y+ D D
Sbjct: 373 -----WAPKPVQALLSSSGLLVGCGAGHSLALCQLPAHPALVQDPKVTYLSPDAIEDTES 427
Query: 269 -KMLFQEGNHARRPSLISGGELYTWGSN 295
K + +E N R S S W N
Sbjct: 428 QKAMDKERNWKERQSETSTQSQSDWSRN 455
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 32/154 (20%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVV----CSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG+ +G+L + E+ + PV F+ + A+ G H + TETG ++ G
Sbjct: 235 VWGSNKHGQL---ANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGR 291
Query: 98 NDFGQLG--ISENIGYSLE------------------PLRISGLKKEVVQISTGYHHSSA 137
D+GQLG + G+ LE P ++G ++S G H+ A
Sbjct: 292 ADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTG----ATEVSCGSEHNLA 347
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
I + G Y WG N +G G G +A P P +
Sbjct: 348 I-IGGVCYSWGWNEHGMCGDGTEANVWAPKPVQA 380
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 170/404 (42%), Gaps = 67/404 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG E S F K +K + GG H+ +T+ G ++ GLN G
Sbjct: 20 WGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGSLFVCGLNKDG 79
Query: 102 QLGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG+ +E + Y P + S L + Q++ G+ + +T +G++ G NS GQLG+
Sbjct: 80 QLGLGHTEEVLY-FTPCK-SLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFGQLGVPH 137
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGR-LGHGQESS 216
+ + IP +E L AA G ++A T G V WG G SGR L GQ
Sbjct: 138 GPRRCV-IPQAIELLREKVVSIAA-GLRHALAATASGTVFQWGTGLASSGRRLCPGQTLP 195
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG- 275
+ FL + P + LE + AG HSA + + G +Y++G ++ Q
Sbjct: 196 L--FLTAKE---PSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLASQAAF 250
Query: 276 ------------NHARRPSLISG----------GELYTWGSNENGCLGIGSIDVLHSPER 313
+ + ++ SG G+++TWG + G LG +++ E
Sbjct: 251 LLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGR-TVETREGWES 309
Query: 314 VQ--------GPFSESP--------VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 357
+ GP +P ++SCG +H A+ G +WGW
Sbjct: 310 EKQDPSLPGSGPQKGTPSCLPCLTGATEISCGSEHNLAVIGGVCHSWGW----------- 358
Query: 358 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ G G G + D P V L V CG H+ AL +
Sbjct: 359 -NEHGMCGDGTEADVWAPKPVPGLRFFLGLHVGCGAGHSLALCQ 401
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 140/314 (44%), Gaps = 64/314 (20%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI--SENIGYSLEPLRISGLKKE-- 124
E HS +A+ A ++A G N +GQLG+ E++ L ++S K
Sbjct: 4 EPHSSEAVPTAAA----------LFAWGANSYGQLGLGHKEDV---LSAQQLSDFCKSGC 50
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ +I+ G HS+ +T +G L++ G N +GQLGLG + P K L G +Q A
Sbjct: 51 IKRITGGGGHSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKS--LLGCAIQQVAC 108
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLG--HGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
G++ ++ +T G+VLS G+ G+LG HG ++ P+ I EL KV
Sbjct: 109 GWDFTIILTENGQVLSCGSNSFGQLGVPHGPRRCVI----------PQAI-ELLREKVVS 157
Query: 243 AAAGFLHSACIDENGRVYIFGD-------RAVDKMLFQEGNHARRPSLISG--------- 286
AAG H+ +G V+ +G R A+ PS ++G
Sbjct: 158 IAAGLRHALAATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCV 217
Query: 287 -------------GELYTWGSNENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKH 332
GELY WGSN++G L + +L P+R++ F + V GW H
Sbjct: 218 LAGSDHSASLTDAGELYVWGSNKHGQLASQAAFLL-LPQRIEARCFQNEKIAAVWSGWTH 276
Query: 333 TAAIS-EGKILTWG 345
A + GK+ TWG
Sbjct: 277 LVAQTVTGKVFTWG 290
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 63/147 (42%), Gaps = 24/147 (16%)
Query: 42 LWGNGDYGRLGLGS----LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG+ +G+L + L R + F+ + A+ G H + T TG V+ G
Sbjct: 235 VWGSNKHGQLASQAAFLLLPQR---IEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGR 291
Query: 98 NDFGQLG--ISENIGYSLEP----LRISGLKKEV----------VQISTGYHHSSAITVD 141
D+GQLG + G+ E L SG +K +IS G H+ A+ +
Sbjct: 292 ADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATEISCGSEHNLAV-IG 350
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + WG N +G G G +A P P
Sbjct: 351 GVCHSWGWNEHGMCGDGTEADVWAPKP 377
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 163/369 (44%), Gaps = 49/369 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G +G+LG G S +P + ++ ++CG T+ +T+ G +YA G + +G +
Sbjct: 399 GTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCM 458
Query: 104 GISENIGYS-LEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G+ + G LEP++++ L V Q+S G +H +T + E+Y WG G+LGL +
Sbjct: 459 GVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEE 518
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGF 220
P +V+ + G + + +T GKVL+ G +LG Q S I+
Sbjct: 519 DYY--TPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINH 576
Query: 221 -----LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ T+ +T L K+L K++ A G H+A IDE GR
Sbjct: 577 EAYHEVPYTTSFT--LAKQLSFYKIRTIAPGKTHTAAIDERGR----------------- 617
Query: 276 NHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-A 334
L T+G N+ G LG+G+ + GP V +VSCG + T A
Sbjct: 618 -------------LLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIA 664
Query: 335 AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 394
A + I WG GG +G + + + HG+D+ P + FG +SC
Sbjct: 665 ATDDNHIFAWGNGG-NGRLA----MTPTERPHGSDICTSWPRPI-FGSLHHVPDLSCRGW 718
Query: 395 HTGALLEYV 403
HT ++E V
Sbjct: 719 HTILIVEKV 727
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 89/181 (49%), Gaps = 14/181 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+YGRLGL S E + P + + A+ CG T LT++G V A GLN+F +
Sbjct: 504 WGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNK 563
Query: 103 LGISENI-------GYSLEPLRIS-GLKKE-----VVQISTGYHHSSAITVDGELYMWGK 149
LG+++ + Y P S L K+ + I+ G H++AI G L +G
Sbjct: 564 LGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGC 623
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N GQLG+G K + I L G + + G E ++A T + +WG GG+GRL
Sbjct: 624 NKCGQLGVG-NYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 682
Query: 210 G 210
Sbjct: 683 A 683
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 17/118 (14%)
Query: 288 ELYTW-----GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKI 341
ELYTW G+ +G LG G P+ V+ + QVSCG T ++ EG++
Sbjct: 389 ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEK-LQGKAIHQVSCGDDFTVCVTDEGQL 447
Query: 342 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 399
+G +G D S G +V + P +NF + QVSCG NH L
Sbjct: 448 YAFG-SDYYGCMGVDKVS-------GPEV--LEPMQLNFFLSNPVEQVSCGDNHVVVL 495
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 44/109 (40%), Gaps = 18/109 (16%)
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 347
E+Y WG ++ +P+++ S QV G H A ++ K L + W
Sbjct: 348 EVYVWGGGKS------------TPQKLDVIKSGCSARQVCAGNTHFAVVTVEKEL-YTWV 394
Query: 348 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 396
G G GQLGHG+ Y P V + QVSCG + T
Sbjct: 395 NMQG-----GTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFT 438
Score = 32.3 bits (72), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEK------HSLKALACGGAHTLFLTE 88
WGNG GRL + E +C+++ + H + L+C G HT+ + E
Sbjct: 674 WGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSCRGWHTILIVE 725
>sp|Q8VE37|RCC1_MOUSE Regulator of chromosome condensation OS=Mus musculus GN=Rcc1 PE=1
SV=1
Length = 421
Score = 95.1 bits (235), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 180/408 (44%), Gaps = 82/408 (20%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GD G+LGLG S+ R +P + + + GG HT+ L+++G VY+ G ND G
Sbjct: 41 GQGDVGQLGLGESVLERKKPALVPLLQ--DVVQAEAGGMHTVCLSQSGQVYSFGCNDEGA 98
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
LG ++ G + P ++ L+++VVQ+S G H++A+T DG +++WG +++NG +GL +
Sbjct: 99 LGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLE 157
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE----- 214
K + +P +V+ + + + A G + V +T G + + G G G+LG E
Sbjct: 158 PMKKSM-VPVQVQLDAPVV--KVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANR 214
Query: 215 --SSILGFLRSTSEYTPRLI----KELEG-VKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LG L PR + + G V+ + A G + I G VY FG
Sbjct: 215 GGRQGLGRL-----LVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNY 269
Query: 268 DKM-------------------------LFQEGNHARRPSLISGGELYTWGSNENGCLGI 302
++ F G H + S G+ Y+ G E G LG+
Sbjct: 270 HQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQH-HTVCMDSEGKAYSLGRAEYGRLGL 328
Query: 303 G------SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSE 355
G SI L S V V V+CG A+S +G++ WG G ++
Sbjct: 329 GEGAEEKSIPTLISRLPV--------VSSVACGASVGYAVSKDGRVFAWGMGTNY----- 375
Query: 356 DGHSSGGQLGHGNDVDYIHPTIVNFG--ENVKALQVSCGFNHTGALLE 401
QLG G D D P + EN L VS G HT L++
Sbjct: 376 -------QLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVK 416
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 114/275 (41%), Gaps = 35/275 (12%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
+H TE G V G D GQLG+ E++ +P + L ++VVQ G H+ ++
Sbjct: 26 SHRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVP-LLQDVVQAEAGGMHTVCLSQ 84
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G++Y +G N G LG +P KVE + Q + G + A+T G+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTEDGRVFL 142
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
W GS R +G ++G L + + +L+ VK+ A+G H + +G +Y
Sbjct: 143 W---GSFRDNNG----VIGLLEPMKKSMVPVQVQLDAPVVKV-ASGNDHLVMLTNDGDLY 194
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERV----QG 316
G ++G R P L +N G G+G + V P V +G
Sbjct: 195 TLG-------CGEQGQLGRVPELF---------ANRGGRQGLGRLLV---PRCVLLKSRG 235
Query: 317 PFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSH 350
CG T AIS EG + +G H
Sbjct: 236 TRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYH 270
>sp|Q96I51|WBS16_HUMAN Williams-Beuren syndrome chromosomal region 16 protein OS=Homo
sapiens GN=WBSCR16 PE=1 SV=2
Length = 464
Score = 95.1 bits (235), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 141/301 (46%), Gaps = 50/301 (16%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKK---EVVQIST 130
++CG AH+L LT+ V++ G N +GQ G + EN YS E R+ ++ +VVQ++
Sbjct: 179 VSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYS-ESHRVHRMQDFDGQVVQVAC 237
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV-ECLSGIFTKQAALGFEQS 189
G HS +T GE+Y G ++GQ GLG + PTK+ L+G+ Q A +
Sbjct: 238 GQDHSLFLTDKGEVYSCGWGADGQTGLGHY--NITSSPTKLGGDLAGVNVIQVATYGDCC 295
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFL 248
+AV+ G + W G+ + + ST PR + GV KV+ AA G
Sbjct: 296 LAVSADGGLFGW--------GNSEYLQLASVTDSTQVNVPRCL-HFSGVGKVRQAACGGT 346
Query: 249 HSACIDENGRVYIFG-----------DRAVDKML---------FQEGNHARR-------- 280
A ++ G V+++G + AV +M+ F R
Sbjct: 347 GCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSHF 406
Query: 281 PSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 340
+L + GEL+ WG N GCLGIG ++ + P RV P PVD V+CG H +++
Sbjct: 407 AALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMP--GEPVD-VACGVDHMVTLAKSF 463
Query: 341 I 341
I
Sbjct: 464 I 464
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 62/134 (46%), Gaps = 13/134 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-KHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN +Y +L + ++ C F ++ ACGG L G V+ G +G
Sbjct: 307 WGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAACGGTGCAVLNGEGHVFVWG---YG 363
Query: 102 QLGISENIGYSLEPLRIS----GLKK-----EVVQISTGYHHSSAITVDGELYMWGKNSN 152
LG N+ S P I GL + +V +I G H +A+T GEL++WGKN
Sbjct: 364 ILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSHFAALTNKGELFVWGKNIR 423
Query: 153 GQLGLGKKAAKVIP 166
G LG+G+ + P
Sbjct: 424 GCLGIGRLEDQYFP 437
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 136/304 (44%), Gaps = 70/304 (23%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSS 136
G H L L+ G + E YS++ LR + +K+++QI+ G +HS
Sbjct: 105 GAEHMLILSSDGKPF-------------EYDNYSMKHLRFESILQEKKIIQITCGDYHSL 151
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
A++ GEL+ WG+N +GQLG+G+K P VE L+G+ Q + G S+A++ G
Sbjct: 152 ALSKGGELFAWGQNLHGQLGVGRKFPSTT-TPQIVEHLAGVPLAQISAGEAHSMALSMSG 210
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+ SWG G+LG G + S+ P LI+ L+ KV+ A G HSA + ++
Sbjct: 211 NIYSWGKNECGQLGLGH---------TESKDDPSLIEGLDNQKVEFVACGGSHSALLTQD 261
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
G ++ FG ++ + RP L++ EL +
Sbjct: 262 GLLFTFGAGKHGQLGHNSTQNELRPCLVA--ELVGYR----------------------- 296
Query: 317 PFSESPVDQVSCG-WKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
V Q++CG W A +S+ GK+ ++G G GQLG+G D +
Sbjct: 297 ------VTQIACGRWHTLAYVSDLGKVFSFGSG------------KDGQLGNGGTRDQLM 338
Query: 375 PTIV 378
P V
Sbjct: 339 PLPV 342
Score = 92.0 bits (227), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 101/200 (50%), Gaps = 13/200 (6%)
Query: 66 SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KE 124
S ++ + + CG H+L L++ G ++A G N GQLG+ + P + L
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVP 192
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ QIS G HS A+++ G +Y WGKN GQLGLG +K P+ +E L + A
Sbjct: 193 LAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESK--DDPSLIEGLDNQKVEFVAC 250
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G S +T G + ++GAG G+LGH + +E P L+ EL G +V A
Sbjct: 251 GGSHSALLTQDGLLFTFGAGKHGQLGHNS---------TQNELRPCLVAELVGYRVTQIA 301
Query: 245 AGFLHS-ACIDENGRVYIFG 263
G H+ A + + G+V+ FG
Sbjct: 302 CGRWHTLAYVSDLGKVFSFG 321
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 3/131 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGLG ES+ P + + ++ +ACGG+H+ LT+ G ++ G GQ
Sbjct: 215 WGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQ 274
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
LG + L P ++ L V QI+ G H+ A D G+++ +G +GQLG G
Sbjct: 275 LG-HNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGT 333
Query: 161 AAKVIPIPTKV 171
+++P+P KV
Sbjct: 334 RDQLMPLPVKV 344
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 52/219 (23%)
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q G S+A++ GG++ +WG G+LG G+ + S TP++++ L GV +
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGVGR--------KFPSTTTPQIVEHLAGVPL 193
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCL 300
+AG HS +L G +Y+WG NE G L
Sbjct: 194 AQISAGEAHSM------------------------------ALSMSGNIYSWGKNECGQL 223
Query: 301 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHS 359
G+G + P ++G V+ V+CG H+A +++ G + T+G G H
Sbjct: 224 GLGHTESKDDPSLIEG-LDNQKVEFVACGGSHSALLTQDGLLFTFG-AGKH--------- 272
Query: 360 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 398
GQLGH + + + P +V + Q++CG HT A
Sbjct: 273 --GQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLA 309
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 24/186 (12%)
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP------ 281
TP+ IK + +K+ G H + +G+ + + + ++ + F+ ++
Sbjct: 87 TPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKHLRFESILQEKKIIQITCG 146
Query: 282 -----SLISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 336
+L GGEL+ WG N +G LG+G + ++ + P+ Q+S G H+ A+
Sbjct: 147 DYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMAL 206
Query: 337 S-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
S G I +WG + GQLG G+ P+++ +N K V+CG +H
Sbjct: 207 SMSGNIYSWG------------KNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSH 254
Query: 396 TGALLE 401
+ L +
Sbjct: 255 SALLTQ 260
>sp|P18754|RCC1_HUMAN Regulator of chromosome condensation OS=Homo sapiens GN=RCC1 PE=1
SV=1
Length = 421
Score = 91.7 bits (226), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 180/407 (44%), Gaps = 80/407 (19%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GD G+LGLG ++ R +P + S E + GG HT+ L+++G VY+ G ND G
Sbjct: 41 GQGDVGQLGLGENVMERKKPALVSIPE--DVVQAEAGGMHTVCLSKSGQVYSFGCNDEGA 98
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
LG ++ G + P ++ L+++VVQ+S G H++A+T DG +++WG +++NG +GL +
Sbjct: 99 LGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLE 157
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + +P +V+ + + A G + V +T G + + G G G+LG E L
Sbjct: 158 PMKKSM-VPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPE---LF 211
Query: 220 FLRSTSEYTPRLIKE----LEG------VKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
R + RL+ L+ V+ + A G + I G VY FG +
Sbjct: 212 ANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQ 271
Query: 270 M-------------------------LFQEGNHARRPSLISGGELYTWGSNENGCLGIG- 303
+ F G H + S G+ Y+ G E G LG+G
Sbjct: 272 LGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQH-HTVCMDSEGKAYSLGRAEYGRLGLGE 330
Query: 304 -----SIDVLHSPERVQGPFSESP-VDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSED 356
SI L S P V V+CG A++ +G++ WG G ++
Sbjct: 331 GAEEKSIPTL---------ISRLPAVSSVACGASVGYAVTKDGRVFAWGMGTNY------ 375
Query: 357 GHSSGGQLGHGNDVDYIHPTIV--NFGENVKALQVSCGFNHTGALLE 401
QLG G D D P + EN L VS G HT L++
Sbjct: 376 ------QLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLVK 416
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 11/183 (6%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
+H TE G V G D GQLG+ EN+ +P +S + ++VVQ G H+ ++
Sbjct: 26 SHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS-IPEDVVQAEAGGMHTVCLSK 84
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G++Y +G N G LG +P KVE + Q + G + A+T G+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTDDGRVFL 142
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
W GS R +G ++G L + + +L+ VK+ A+G H + +G +Y
Sbjct: 143 W---GSFRDNNG----VIGLLEPMKKSMVPVQVQLDVPVVKV-ASGNDHLVMLTADGDLY 194
Query: 261 IFG 263
G
Sbjct: 195 TLG 197
>sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus
GN=RCC1 PE=1 SV=1
Length = 421
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 178/406 (43%), Gaps = 78/406 (19%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GD G+LGLG S+ R +P + + + GG HT+ L ++G VY+ G ND G
Sbjct: 41 GQGDVGQLGLGESVLERKKPALVPLLQ--DVVQAEAGGMHTVCLNQSGQVYSFGCNDEGA 98
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
LG ++ G + P ++ L+++VVQ+S G H++A+T DG +++WG +++NG +GL +
Sbjct: 99 LGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLE 157
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + +P +V+ + + A G + V +T G + + G G G+LG E L
Sbjct: 158 PMKKSM-VPVQVQLDMPVV--KVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPE---LF 211
Query: 220 FLRSTSEYTPRLIKE----LEG------VKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
R + RL+ L+ V+ + A G + I G VY FG +
Sbjct: 212 ANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQ 271
Query: 270 M-------------------------LFQEGNHARRPSLISGGELYTWGSNENGCLGIG- 303
+ F G H + S G+ Y+ G E G LG+G
Sbjct: 272 LGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQH-HTICMDSEGKAYSLGRAEYGRLGLGE 330
Query: 304 -----SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDG 357
SI L S V V V+CG A+S +G++ WG G ++
Sbjct: 331 GAEEKSIPTLISRLPV--------VSSVACGASVGYAVSKDGRVFAWGMGTNY------- 375
Query: 358 HSSGGQLGHGNDVDYIHPTIVNFG--ENVKALQVSCGFNHTGALLE 401
QLG G D D P + EN L VS G HT L++
Sbjct: 376 -----QLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVK 416
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 11/183 (6%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
+H TE G V G D GQLG+ E++ +P + L ++VVQ G H+ +
Sbjct: 26 SHRSHKTEPGLVLTLGQGDVGQLGLGESVLERKKPALVP-LLQDVVQAEAGGMHTVCLNQ 84
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G++Y +G N G LG +P KVE + Q + G + A+T G+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTEDGRVFL 142
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
W GS R +G ++G L + + +L+ VK+ A+G H + +G +Y
Sbjct: 143 W---GSFRDNNG----VIGLLEPMKKSMVPVQVQLDMPVVKV-ASGNDHLVMLTTDGDLY 194
Query: 261 IFG 263
G
Sbjct: 195 TLG 197
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 125/303 (41%), Gaps = 46/303 (15%)
Query: 76 LACGGAHTLFLTETGCVYATG--LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH 133
++ G +HT LTE G V+ G ++ G +G+ E + S+ P+++ L VV++++G
Sbjct: 124 VSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ-LDMPVVKVASGND 182
Query: 134 HSSAITVDGELYMWGKNSNGQLGL---------GKKAAKVIPIPTKVECLSG-----IFT 179
H +T DG+LY G GQLG G++ + + +P V S +
Sbjct: 183 HLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRF 242
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
+ A G + A++ G V +G +LG +S F+ K G
Sbjct: 243 QDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASC--FIPQNLTSFKNSTKSWVGF- 299
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLIS------------- 285
+ G H+ C+D G+ Y G ++ EG + P+LIS
Sbjct: 300 ----SGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGAS 355
Query: 286 -------GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD-QVSCGWKHTAAIS 337
G ++ WG N LG G + SP + G E+ V VS G +HT +
Sbjct: 356 VGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLV 415
Query: 338 EGK 340
+ K
Sbjct: 416 KDK 418
>sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal region 16 protein homolog
OS=Mus musculus GN=Wbscr16 PE=2 SV=1
Length = 461
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 144/320 (45%), Gaps = 48/320 (15%)
Query: 56 LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSL 113
LE P+ ++ + ++CG AH+L LT+ V++ G N GQ G + E+ YS
Sbjct: 156 LEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSE 215
Query: 114 --EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
+ R+ +VVQ+ G HS +T GE+Y G ++GQ GLG + P+K+
Sbjct: 216 SHKVHRMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHY--NITSTPSKL 273
Query: 172 -ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
L+G+ Q A + +A++ G V W G+ + + ST PR
Sbjct: 274 GGDLAGVTVVQVATYGDCCLALSADGGVFGW--------GNSEYLQLASVTDSTQVNVPR 325
Query: 231 LIKELEGV-KVKIAAAGFLHSACIDENGRVYIFG-----------DRAVDKML------F 272
+ GV KVK A G A ++ G V+++G + A+ +M+
Sbjct: 326 CLP-FSGVGKVKQVACGGTGCAVLNAEGHVFVWGYGILGKGPKLLETAIPEMIPPTLFGL 384
Query: 273 QEGNHARRPS-----------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 321
E N + S L + GEL+ WG N GCLGIG ++ + P RV P
Sbjct: 385 TEFNPEVQVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMP--GE 442
Query: 322 PVDQVSCGWKHTAAISEGKI 341
PVD V+CG H +++ I
Sbjct: 443 PVD-VACGVDHMVTLAKSFI 461
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-KHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN +Y +L + ++ C F +K +ACGG L G V+ G G
Sbjct: 304 WGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGGTGCAVLNAEGHVFVWGYGILG 363
Query: 102 ------QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
+ I E I +L L + +V QI G H +A+T GEL++WGKN G L
Sbjct: 364 KGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFAALTNKGELFVWGKNIRGCL 423
Query: 156 GLGKKAAKVIP 166
G+G+ + P
Sbjct: 424 GIGRLEDQYFP 434
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 99/252 (39%), Gaps = 47/252 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LG G + P + + + A ACG HTL LTE G VY G N GQ
Sbjct: 147 WGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQ 206
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK--- 159
LG L P I + +V+++ G S + G LY +G GQLG
Sbjct: 207 LGQGNQTDAVLSPATIQYNGQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGK 266
Query: 160 --------------------------KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
K +V+P+P + + A G ++ +
Sbjct: 267 FIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPN-------VVARDVACGANHTLVLD 319
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK--ELEGVKVKIAAAGFLHSA 251
+V SWG GG GRLGH ++ E PRL+K + G G+ S
Sbjct: 320 SQKRVFSWGFGGYGRLGHAEQK---------DEMVPRLVKLFDFPGRGATQIYCGYQCSF 370
Query: 252 CIDENGRVYIFG 263
+ E G ++ +G
Sbjct: 371 ALSEMGGLFFWG 382
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 21/201 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEV-VQISTGYHHSSA 137
AH+L +T G +++ G ND GQLG + LE P I GL +EV V + G +H+ A
Sbjct: 132 AAHSLIITTEGKLWSWGRNDKGQLGHGDT--KRLEAPKLIEGLGEEVIVAAACGRNHTLA 189
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+T +G +Y +G+N GQLG G + V+ P ++ +G + A G E S+ V G
Sbjct: 190 LTENGTVYTFGENKLGQLGQGNQTDAVLS-PATIQ-YNGQPIVKVACGAEFSMIVDCKGN 247
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTS---EYTPRLIK------------ELEGVKVKI 242
+ S+G G+LGH + + + E PR + + V +
Sbjct: 248 LYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARD 307
Query: 243 AAAGFLHSACIDENGRVYIFG 263
A G H+ +D RV+ +G
Sbjct: 308 VACGANHTLVLDSQKRVFSWG 328
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 101/252 (40%), Gaps = 65/252 (25%)
Query: 168 PTKVECLSGIFTKQAALG--FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P + CLS + G S+ +T GK+ SWG G+LGHG +
Sbjct: 112 PHRYGCLSDVQVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRL-------- 163
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
P+LI+ L + AA G H+ + ENG VY
Sbjct: 164 -EAPKLIEGLGEEVIVAAACGRNHTLALTENGTVY------------------------- 197
Query: 286 GGELYTWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILT 343
T+G N+ G LG G+ D + SP +Q ++ P+ +V+CG + + + +G + +
Sbjct: 198 -----TFGENKLGQLGQGNQTDAVLSPATIQ--YNGQPIVKVACGAEFSMIVDCKGNLYS 250
Query: 344 WGWGGSHGTFSEDGHSSGGQLGHGN-----DVDYIHPTIVNFGE-----------NVKAL 387
+G + + GH+S G+ D + I + F E NV A
Sbjct: 251 FGC----PEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVAR 306
Query: 388 QVSCGFNHTGAL 399
V+CG NHT L
Sbjct: 307 DVACGANHTLVL 318
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 21/184 (11%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK---KEVVQIST 130
+ +ACG HTL L V++ G +G+LG +E + P + + QI
Sbjct: 306 RDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD-EMVPRLVKLFDFPGRGATQIYC 364
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
GY S A++ G L+ WG + + + P V+ L G + A G + S+
Sbjct: 365 GYQCSFALSEMGGLFFWGVTNTSR--------ESTMYPKAVQDLCGWKIRSLACG-KSSI 415
Query: 191 AVTGGGKVLSWGAGGS-GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
V +SWG + G LG+G + S T + +K L+GV + G+ H
Sbjct: 416 IVAADDSTISWGPSPTFGELGYGDN-------KPKSSTTAQEVKTLDGVYSEQVVMGYSH 468
Query: 250 SACI 253
S I
Sbjct: 469 SLVI 472
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 80/200 (40%), Gaps = 28/200 (14%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA--LACGGAHTLFLTETGCVY 93
Q+R + WG G YGRLG + P + F+ A + CG + L+E G ++
Sbjct: 321 QKRVFS-WGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQCSFALSEMGGLF 379
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN- 152
G+ + + E+ Y + G K + ++ G S + D WG +
Sbjct: 380 FWGVTNTSR----ESTMYPKAVQDLCGWK--IRSLACG-KSSIIVAADDSTISWGPSPTF 432
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
G+LG G K +V+ L G++++Q +G+ S+ + R
Sbjct: 433 GELGYGDNKPKSSTTAQEVKTLDGVYSEQVVMGYSHSLVI--------------ARQDTE 478
Query: 213 QESSILGFLRSTSEYTPRLI 232
QE L+ EY PR +
Sbjct: 479 QEKEK---LKKLPEYNPRTL 495
Score = 37.0 bits (84), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 29/111 (26%)
Query: 292 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHG 351
WG + GCL + + V GP C +EGK+ +WG
Sbjct: 110 WGPHRYGCLSDVQVSCV-----VSGP----------CAAHSLIITTEGKLWSWG------ 148
Query: 352 TFSEDGHSSGGQLGHGNDVDYIHPTIVN-FGENVKALQVSCGFNHTGALLE 401
+ GQLGHG+ P ++ GE V + +CG NHT AL E
Sbjct: 149 ------RNDKGQLGHGDTKRLEAPKLIEGLGEEV-IVAAACGRNHTLALTE 192
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 93/200 (46%), Gaps = 22/200 (11%)
Query: 33 STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
ST + FA WG GD GRLGLG+ ES P + + CG ++ LT G
Sbjct: 459 STERELFA--WGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQA 516
Query: 93 YATGLNDFGQLG---------------ISENIGYSLEPLRISGLKKE-VVQISTGYHHSS 136
A G N F +LG + E + ++L L + L +E ++ I G HS+
Sbjct: 517 LACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTL--LGSAPLDQEPLLSIDLGTAHSA 574
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
A+T G+ Y +G N +GQLG + P KV+ L GI A G +VA+
Sbjct: 575 AVTASGDCYTFGSNQHGQLGTNTRRGSRAP--CKVQGLEGIKMAMVACGDAFTVAIGAES 632
Query: 197 KVLSWGAGGSGRLGHGQESS 216
+V SWG G GRLG E +
Sbjct: 633 EVYSWGKGARGRLGRRDEDA 652
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 139/309 (44%), Gaps = 32/309 (10%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
++K +ACG T LT+ G + G G LG S + + L E+VQ++ G
Sbjct: 392 TIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACG 451
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
H A++ + EL+ WG+ +G+LGLG + + P +V G ++ G + S+
Sbjct: 452 ASHVLALSTERELFAWGRGDSGRLGLGTRESHS--CPQQVPMPPGQEAQRVVCGIDSSMI 509
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+T G+ L+ G+ +LG L L E P +++E + + L SA
Sbjct: 510 LTVPGQALACGSNRFNKLG-------LDHLSLGEEPVPH--QQVE----EALSFTLLGSA 556
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSP 311
+D+ + +L + A ++ + G+ YT+GSN++G LG + +P
Sbjct: 557 PLDQ------------EPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAP 604
Query: 312 ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 370
+VQG + V+CG T AI +E ++ +WG G+ G +G L +
Sbjct: 605 CKVQG-LEGIKMAMVACGDAFTVAIGAESEVYSWG-KGARGRLGRRDEDAG--LPRPVQL 660
Query: 371 DYIHPTIVN 379
D HP V
Sbjct: 661 DETHPYTVT 669
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 102/250 (40%), Gaps = 22/250 (8%)
Query: 27 CKRWISSTLQRR-FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF 85
C + ++ L R +G+G G LG GSL +P + A + + +ACG +H L
Sbjct: 398 CGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLA 457
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
L+ ++A G D G+LG+ +S +E ++ G S +TV G+
Sbjct: 458 LSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQAL 517
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKV--ECLSGIFTKQAA----------LGFEQSVAVT 193
G N +LGL + P+P + E LS A LG S AVT
Sbjct: 518 ACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVT 577
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G ++G+ G+LG P ++ LEG+K+ + A G + I
Sbjct: 578 ASGDCYTFGSNQHGQLGTNTRR---------GSRAPCKVQGLEGIKMAMVACGDAFTVAI 628
Query: 254 DENGRVYIFG 263
VY +G
Sbjct: 629 GAESEVYSWG 638
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 123/325 (37%), Gaps = 60/325 (18%)
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG---LGKKAAKVIP--IPT 169
PLR+ L EVVQ++ G + +T G L +W G G L + P I
Sbjct: 324 PLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISR 383
Query: 170 KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
+E SG+ K A G + +T G ++++G+G +G LGHG + I P
Sbjct: 384 FLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDI---------SQP 434
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD--------------RAVDKMLFQEG 275
+++ L G ++ A G H + ++ +G ++ G
Sbjct: 435 TIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPG 494
Query: 276 NHARRPS--------LISGGELYTWGSNENGCLGIGSIDVLHSP---ERVQ--------- 315
A+R L G+ GSN LG+ + + P ++V+
Sbjct: 495 QEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLG 554
Query: 316 -GPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 374
P + P+ + G H+AA++ G TF + H GQLG
Sbjct: 555 SAPLDQEPLLSIDLGTAHSAAVTAS--------GDCYTFGSNQH---GQLGTNTRRGSRA 603
Query: 375 PTIVNFGENVKALQVSCGFNHTGAL 399
P V E +K V+CG T A+
Sbjct: 604 PCKVQGLEGIKMAMVACGDAFTVAI 628
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 102/252 (40%), Gaps = 47/252 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G + P + A ++ ACG HTL LT+TG V+A G N GQ
Sbjct: 172 WGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQ 231
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK--- 159
LG+ P +I + + +++ G S + G LY +G GQLG
Sbjct: 232 LGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGK 291
Query: 160 --------------------------KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
K +++P+P + + A G ++ +
Sbjct: 292 FIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPN-------VVVRDVACGANHTLVLD 344
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK--ELEGVKVKIAAAGFLHSA 251
+V SWG GG GRLGH ++ E PRL+K + G AG+ S
Sbjct: 345 SQKRVFSWGFGGYGRLGHAEQK---------DEMVPRLVKLFDFPGRGATQIYAGYTCSF 395
Query: 252 CIDENGRVYIFG 263
+ E G ++ +G
Sbjct: 396 AVSEVGGLFFWG 407
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 119/291 (40%), Gaps = 41/291 (14%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
+SG++ V + HS IT +G+L+ WG+N GQLG G K + P +E LS
Sbjct: 143 LSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD--TKRVEAPRLIEALSHE 200
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
AA G ++A+T G V ++G G+LG G ++ + +P I G
Sbjct: 201 AIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVP--------SPAQIM-YNG 251
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ-EGNHARRPSLISGGELYTWGSNE 296
+ A G S +D G +Y FG ++ +G R I E
Sbjct: 252 QPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRI-----------E 300
Query: 297 NGCLGIGSIDVLHSPERVQG---PFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGT 352
C + + + G P V V+CG HT + S+ ++ +WG+GG
Sbjct: 301 YDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGY--- 357
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGE--NVKALQVSCGFNHTGALLE 401
G+LGH D + P +V + A Q+ G+ + A+ E
Sbjct: 358 ---------GRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSE 399
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAIT 139
AH+L +T G +++ G N+ GQLG + P I L E +V + G +H+ A+T
Sbjct: 158 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEA-PRLIEALSHEAIVLAACGRNHTLALT 216
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
G ++ +G+N GQLGLG + +P P ++ +G + A G E S+ + G +
Sbjct: 217 DTGSVFAFGENKMGQLGLGNQ-TDAVPSPAQI-MYNGQPITKMACGAEFSMLMDCKGNLY 274
Query: 200 SWGAGGSGRLGHGQESSILG---FLRSTSEYTPRLIK------------ELEGVKVKIAA 244
S+G G+LGH + + + E PR + + V V+ A
Sbjct: 275 SFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVA 334
Query: 245 AGFLHSACIDENGRVYIFG 263
G H+ +D RV+ +G
Sbjct: 335 CGANHTLVLDSQKRVFSWG 353
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 95/228 (41%), Gaps = 39/228 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G G+LGLG+ + + +ACG ++ + G +Y+ G ++GQ
Sbjct: 224 FGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQ 283
Query: 103 LG---------ISENIGYSLE--PLRISGLKKE-------------VVQISTGYHHSSAI 138
LG ++ I Y E P R++ ++ V ++ G +H+ +
Sbjct: 284 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 343
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
++ WG G+LG ++ +++P K+ G Q G+ S AV+ G +
Sbjct: 344 DSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGL 403
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
WGA + R ES++ P+ +++L G +++ A G
Sbjct: 404 FFWGATNTSR-----ESTMY----------PKAVQDLCGWRIRSLACG 436
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 62/169 (36%), Gaps = 50/169 (29%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK---KEVVQIS 129
++ +ACG HTL L V++ G +G+LG +E + P + + QI
Sbjct: 330 VRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD-EMVPRLVKLFDFPGRGATQIY 388
Query: 130 TGYHHSSAITVDGELYMWGKNSN------------------------------------- 152
GY S A++ G L+ WG +
Sbjct: 389 AGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADEST 448
Query: 153 ---------GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
G+LG G K +V+ L GIF++Q A+G+ S+ +
Sbjct: 449 ISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVI 497
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 101/252 (40%), Gaps = 47/252 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G + P + + + ACG HTL LTETG V+A G N GQ
Sbjct: 174 WGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQ 233
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK--- 159
LG+ P +I + + +++ G S + G LY +G GQLG
Sbjct: 234 LGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGK 293
Query: 160 --------------------------KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
K +++P+P + + A G ++ +
Sbjct: 294 FIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPN-------VVVRDVACGANHTLVLD 346
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK--ELEGVKVKIAAAGFLHSA 251
+V SWG GG GRLGH ++ E PRL+K + G AG+ S
Sbjct: 347 SQKRVFSWGFGGYGRLGHAEQK---------DEMVPRLVKLFDFPGRGASQIYAGYTCSF 397
Query: 252 CIDENGRVYIFG 263
+ E G ++ +G
Sbjct: 398 AVSEVGGLFFWG 409
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 148/353 (41%), Gaps = 53/353 (15%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAIT 139
AH+L +T G +++ G N+ GQLG + P I GL EV V + G +H+ A+T
Sbjct: 160 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEA-PRLIEGLSHEVIVSAACGRNHTLALT 218
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
G ++ +G+N GQLGLG + +P P ++ +G + A G E S+ + G +
Sbjct: 219 ETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQI-MYNGQPITKMACGAEFSMIMDCKGNLY 276
Query: 200 SWGAGGSGRLGHGQESSILG---FLRSTSEYTPRLIK------------ELEGVKVKIAA 244
S+G G+LGH + + + E PR + + V V+ A
Sbjct: 277 SFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVA 336
Query: 245 AGFLHSACIDENGRVYIFG-------------DRAVDKMLFQEGNHARRPSLISGGELYT 291
G H+ +D RV+ +G D V +++ R S I G +
Sbjct: 337 CGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCS 396
Query: 292 WGSNENGCLGI-GSIDVLHSPERVQGPFSESPVDQVSCGWK-HTAAISEGKILTWGWGGS 349
+ +E G L G+ + S E P + Q CGW+ + A + I+
Sbjct: 397 FAVSEVGGLFFWGATNT--SRESTMYPKAV----QDLCGWRIRSLACGKSSIIV---AAD 447
Query: 350 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHT 396
T S + G+LG+G+ P + VK L QV+ G++H+
Sbjct: 448 ESTISWGPSPTFGELGYGDH----KPKSSTAAQEVKTLDGIFSEQVAMGYSHS 496
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 109/268 (40%), Gaps = 39/268 (14%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
++G++ V + HS IT +G+L+ WG+N GQLG G K + P +E LS
Sbjct: 145 LAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD--TKRVEAPRLIEGLSHE 202
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
AA G ++A+T G V ++G G+LG G ++ + +P I G
Sbjct: 203 VIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVP--------SPAQIM-YNG 253
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ-EGNHARRPSLISGGELYTWGSNE 296
+ A G S +D G +Y FG ++ +G R I E
Sbjct: 254 QPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRI-----------E 302
Query: 297 NGCLGIGSIDVLHSPERVQG---PFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGT 352
C + + + G P V V+CG HT + S+ ++ +WG+GG
Sbjct: 303 YDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGY--- 359
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
G+LGH D + P +V
Sbjct: 360 ---------GRLGHAEQKDEMVPRLVKL 378
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 95/228 (41%), Gaps = 39/228 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G G+LGLG+ + + +ACG ++ + G +Y+ G ++GQ
Sbjct: 226 FGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 285
Query: 103 LG---------ISENIGYSLE--PLRISGLKKE-------------VVQISTGYHHSSAI 138
LG ++ I Y E P R++ ++ V ++ G +H+ +
Sbjct: 286 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 345
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
++ WG G+LG ++ +++P K+ G Q G+ S AV+ G +
Sbjct: 346 DSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGL 405
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
WGA + R ES++ P+ +++L G +++ A G
Sbjct: 406 FFWGATNTSR-----ESTMY----------PKAVQDLCGWRIRSLACG 438
Score = 40.0 bits (92), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 62/169 (36%), Gaps = 50/169 (29%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK---KEVVQIS 129
++ +ACG HTL L V++ G +G+LG +E + P + + QI
Sbjct: 332 VRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD-EMVPRLVKLFDFPGRGASQIY 390
Query: 130 TGYHHSSAITVDGELYMWGKNSN------------------------------------- 152
GY S A++ G L+ WG +
Sbjct: 391 AGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADEST 450
Query: 153 ---------GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
G+LG G K +V+ L GIF++Q A+G+ S+ +
Sbjct: 451 ISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVI 499
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 65/171 (38%), Gaps = 35/171 (20%)
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
+I E E K ++ G S C G++ IFG D + +E + G L
Sbjct: 84 VITEPEHTKERVKLEG---SKC---KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNL- 136
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSH 350
WG + GCL + + V G SC +EGK+ +WG
Sbjct: 137 -WGPHRYGCLAGVRVRTV-----VSG----------SCAAHSLLITTEGKLWSWG----- 175
Query: 351 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
+ GQLGHG+ P ++ + + +CG NHT AL E
Sbjct: 176 -------RNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTE 219
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 87.0 bits (214), Expect = 2e-16, Method: Composition-based stats.
Identities = 57/191 (29%), Positives = 92/191 (48%), Gaps = 15/191 (7%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G GD+GRLGLG SL + P + + + H + ++ GG H+L LT G V++ G ND
Sbjct: 362 FGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQ 421
Query: 101 GQLGISENIGYSLEPLRISGLKK---------EVVQISTGYHHSSAITVDGELYMWGKNS 151
GQLGI P +I + ++++S G +HS AI+ + + Y WG++
Sbjct: 422 GQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSD 481
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTK----QAALGFEQSVAVTGGGKVLSWGAGGSG 207
G LG +P + S + + GF+ +VA++ G + SWG
Sbjct: 482 YGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQ 541
Query: 208 RLGHGQESSIL 218
RLG + + L
Sbjct: 542 RLGFKSDENQL 552
Score = 84.0 bits (206), Expect = 2e-15, Method: Composition-based stats.
Identities = 89/345 (25%), Positives = 144/345 (41%), Gaps = 74/345 (21%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-KHSLK--ALACGGAHTLFLTETGCVYATGLND 99
+G+G G+LG G+LES P + F+ K SL+ ++A GG H+L LT G VY+ G ND
Sbjct: 212 FGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANGGKHSLALTICGKVYSWGGND 271
Query: 100 FGQLG---------------ISENIGYSLEPLRISGL----------------------- 121
QLG I+ NI Y+ +
Sbjct: 272 SCQLGLGNGSSSSYYSLPQLINFNISYNNNNNNNNNNSTNNNNNNNNDGAQQQFSLSQNS 331
Query: 122 -----KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
K ++V++S G + S+ IT G L+ +G+ +G+LGLG+++ + P V+ L G
Sbjct: 332 SSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQG 391
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
F + G S+ +T G V S+G G+LG G S+ + + ++ +
Sbjct: 392 HFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQ 451
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFG---------------DR-----------AVDKM 270
+ + +AG HS I +N Y +G DR VD +
Sbjct: 452 PINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNV 511
Query: 271 LFQE--GNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHSPER 313
F + ++ G LY+WG N LG S + +P++
Sbjct: 512 KFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLTPKK 556
Score = 57.4 bits (137), Expect = 2e-07, Method: Composition-based stats.
Identities = 96/367 (26%), Positives = 141/367 (38%), Gaps = 116/367 (31%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP-IPTKVECLSGIFTK 180
++++V ISTG HSS IT G LY +G G+LG G + P + + +
Sbjct: 187 QQKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVV 246
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK------- 233
A G + S+A+T GKV SWG S +LG G SS S+ P+LI
Sbjct: 247 SIANGGKHSLALTICGKVYSWGGNDSCQLGLGNGSS------SSYYSLPQLINFNISYNN 300
Query: 234 ----------------ELEGV---------------KVKIA--AAGFLHSACIDENGRVY 260
+G K+KI + G SA I + G ++
Sbjct: 301 NNNNNNNNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLF 360
Query: 261 IFGDRAVDKMLFQEGNHAR------------RPSLI------------SGGE-------- 288
FG G+H R P L+ SGG
Sbjct: 361 TFG----------RGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNK 410
Query: 289 --LYTWGSNENGCLGIGSIDVLHS-PERV-----QGPFSESPVD--QVSCGWKHTAAISE 338
++++G N+ G LGIG + P+++ + P++ +VS G H+ AIS+
Sbjct: 411 GLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISD 470
Query: 339 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV--DYIHPTIVNFG----ENVKALQVSCG 392
T+ W G S G LG DV D P ++N +NVK + VS G
Sbjct: 471 NND-TYAW----------GRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSG 519
Query: 393 FNHTGAL 399
F H A+
Sbjct: 520 FQHNVAM 526
Score = 57.0 bits (136), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Query: 39 FAALWGNG--DYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
+ +WGNG +Y + S+ + + + ++ G H+ F+T+ G +Y G
Sbjct: 160 YITIWGNGIRNYKNCNMSSIG------FSEMYNQQKIVLISTGAIHSSFITDQGNLYTFG 213
Query: 97 LNDFGQLGISENIGYSLEPLRISGLKKE----VVQISTGYHHSSAITVDGELYMWGKNSN 152
G+LG YS P + + + VV I+ G HS A+T+ G++Y WG N +
Sbjct: 214 DGLLGKLGHGNLESYS-SPKLVEFFQTKPSLRVVSIANGGKHSLALTICGKVYSWGGNDS 272
Query: 153 GQLGLG 158
QLGLG
Sbjct: 273 CQLGLG 278
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 101/245 (41%), Gaps = 33/245 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LG G ++ P + + + ACG HTL LTE G VYA G N GQ
Sbjct: 165 WGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQ 224
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG---LGK 159
LG+ P +I + + +++ G S + G LY +G GQLG GK
Sbjct: 225 LGLGNKTDAVPSPAQILYNGQPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGK 284
Query: 160 KAAKVIPIPTKVECLS-------------------GIFTKQAALGFEQSVAVTGGGKVLS 200
A+ I E ++ + + A G S+ + +V S
Sbjct: 285 YIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFS 344
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK--ELEGVKVKIAAAGFLHSACIDENGR 258
WG GG GRLGH ++ E PRL+K + G AG S + E G
Sbjct: 345 WGFGGYGRLGHSEQR---------DEMVPRLVKLFDFPGRGAAQIYAGATCSFAVSEMGG 395
Query: 259 VYIFG 263
++ +G
Sbjct: 396 LFFWG 400
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 23/210 (10%)
Query: 73 LKALACG--GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV-VQIS 129
++++A G AH+L +T G +++ G ND GQLG + I P I LK EV V +
Sbjct: 141 VRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGD-IKRIDVPKLIESLKGEVFVHAA 199
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G +H+ A+T +G +Y +G+N GQLGLG K +P P ++ +G + A G E S
Sbjct: 200 CGRNHTLALTENGSVYAFGENKMGQLGLGNK-TDAVPSPAQI-LYNGQPITKVACGAEFS 257
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE--------------- 234
+ + G + S+G G+LGH + + + EY LI
Sbjct: 258 MIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRI-EYDCELIARRIAIFIEKTKDGQIL 316
Query: 235 -LEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ V V+ A G HS +D RV+ +G
Sbjct: 317 PVPNVVVRDIACGINHSLILDSQKRVFSWG 346
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 112/268 (41%), Gaps = 39/268 (14%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
++G++ V + HS ITV+G+L+ WG+N GQLG G K I +P +E L G
Sbjct: 136 LTGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGD--IKRIDVPKLIESLKGE 193
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
AA G ++A+T G V ++G G+LG G ++ + +P I G
Sbjct: 194 VFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDAVP--------SPAQIL-YNG 244
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ-EGNHARRPSLISGGELYTWGSNE 296
+ A G S +D G +Y FG ++ +G + R I E
Sbjct: 245 QPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRI-----------E 293
Query: 297 NGCLGIGSIDVLHSPERVQG---PFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGT 352
C I + + G P V ++CG H+ + S+ ++ +WG+GG
Sbjct: 294 YDCELIARRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGY--- 350
Query: 353 FSEDGHSSGGQLGHGNDVDYIHPTIVNF 380
G+LGH D + P +V
Sbjct: 351 ---------GRLGHSEQRDEMVPRLVKL 369
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 91/228 (39%), Gaps = 39/228 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G G+LGLG+ + + +ACG ++ + G +Y+ G ++GQ
Sbjct: 217 FGENKMGQLGLGNKTDAVPSPAQILYNGQPITKVACGAEFSMIMDCKGNLYSFGCPEYGQ 276
Query: 103 LG---------ISENIGYSLEPL--RISGLKKE-------------VVQISTGYHHSSAI 138
LG ++ I Y E + RI+ ++ V I+ G +HS +
Sbjct: 277 LGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLIL 336
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
++ WG G+LG ++ +++P K+ G Q G S AV+ G +
Sbjct: 337 DSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAAQIYAGATCSFAVSEMGGL 396
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
WGA + R S P+ +++L G KV+ A G
Sbjct: 397 FFWGATNTSR---------------DSTMYPKAVQDLCGWKVRSLACG 429
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 14/107 (13%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 346
G+L++WG N+ G LG G I + P+ ++ E V +CG HT A++E
Sbjct: 160 GKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFV-HAACGRNHTLALTE-------- 210
Query: 347 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL-QVSCG 392
+G+ G + GQLG GN D + P+ N + + +V+CG
Sbjct: 211 ---NGSVYAFGENKMGQLGLGNKTDAV-PSPAQILYNGQPITKVACG 253
Score = 36.6 bits (83), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 68/173 (39%), Gaps = 16/173 (9%)
Query: 25 GICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
GI I + +R F+ WG G YGRLG P + F+ GA +
Sbjct: 329 GINHSLILDSQKRVFS--WGFGGYGRLGHSEQRDEMVPRLVKLFD------FPGRGAAQI 380
Query: 85 FLTETGCVYAT----GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
+ T C +A GL +G S + ++ P + L V+ S +
Sbjct: 381 YAGAT-CSFAVSEMGGLFFWGATNTSRD--STMYPKAVQDLCGWKVRSLACGKSSIIVAA 437
Query: 141 DGELYMWGKNSN-GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
D WG + G+LG G AK +V+ L GI++ Q +G ++ V
Sbjct: 438 DESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTLDGIYSDQVIMGNSHTLVV 490
>sp|Q4R828|RCCD1_MACFA RCC1 domain-containing protein 1 OS=Macaca fascicularis GN=RCCD1
PE=2 SV=1
Length = 376
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 117/263 (44%), Gaps = 37/263 (14%)
Query: 148 GKNSNGQLGLGKKA-AKVIPIPTKVECLSG-IFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
G+ G+L L A A V P P L+ + +Q LG E ++ + G+V SWG G
Sbjct: 127 GEAQIGRLPLLPCARAYVSPRPPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGR 186
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LGHG +E PRL++ L+G+ + AAG HS C+ E G +YI+G
Sbjct: 187 HGQLGHGT---------LEAELEPRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWN 237
Query: 266 AVDKMLFQEGNHARRPSLIS---------GGELYTWGSNENGCLGIGSIDVLHSPERVQG 316
++ N A ++ G ++ G E+G I V P +
Sbjct: 238 ESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRTGRVEDGAPAP-FIAVQPFPALLDL 296
Query: 317 PFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 375
P V +VSCG +HTA ++ G++ TWGWG GQLGH + P
Sbjct: 297 PLGSDAV-KVSCGSRHTAVVTRTGELYTWGWGKY------------GQLGHEDTTSLDWP 343
Query: 376 TIVNF--GENVKALQVSCGFNHT 396
V + + ++ V+CG +T
Sbjct: 344 RRVEYFVDKQLQVKAVTCGPWNT 366
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 20/177 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG G+LE+ P + A + ++ +A GG H++ ++ETG +Y G N+ GQ
Sbjct: 182 WGGGRHGQLGHGTLEAELEPRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQ 241
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
L + P R E V ++ + DG G++ G A
Sbjct: 242 LAL---------PTRNLAEDGETVA-----REATGLNEDGSQV----KRTGRVEDGAPAP 283
Query: 163 --KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
V P P ++ G + + G + VT G++ +WG G G+LGH +S+
Sbjct: 284 FIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSL 340
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 91/221 (41%), Gaps = 14/221 (6%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
Q+ G H+ + G+++ WG +GQLG G A++ P +E L G+ + A G
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEL--EPRLLEALQGLTMAEVAAGG 219
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
SV V+ G + WG SG+L + L E R L ++ G
Sbjct: 220 WHSVCVSETGDIYIWGWNESGQLALPTRN-----LAEDGETVAREATGLNEDGSQVKRTG 274
Query: 247 FLHSACIDENGRVYIFG---DRAVDKMLFQEGNHARRPSLIS-GGELYTWGSNENGCLGI 302
+ V F D + + +R ++++ GELYTWG + G LG
Sbjct: 275 RVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGH 334
Query: 303 GSIDVLHSPERVQGPFSES-PVDQVSCG-WK-HTAAISEGK 340
L P RV+ + V V+CG W + A+ +GK
Sbjct: 335 EDTTSLDWPRRVEYFVDKQLQVKAVTCGPWNTYVYAVEKGK 375
Score = 40.8 bits (94), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 28/144 (19%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKI 341
L + G++++WG +G LG G+++ P ++ + + + GW H+ +SE G I
Sbjct: 173 LDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTMAEVAAGGW-HSVCVSETGDI 231
Query: 342 LTWGWGGS------HGTFSEDGHSSG----------------GQLGHGNDVDYI----HP 375
WGW S +EDG + G++ G +I P
Sbjct: 232 YIWGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFP 291
Query: 376 TIVNFGENVKALQVSCGFNHTGAL 399
+++ A++VSCG HT +
Sbjct: 292 ALLDLPLGSDAVKVSCGSRHTAVV 315
>sp|P25183|RCC1_XENLA Regulator of chromosome condensation OS=Xenopus laevis GN=rcc1 PE=2
SV=1
Length = 424
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 190/430 (44%), Gaps = 76/430 (17%)
Query: 17 DIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKA 75
D+K L I T+ + L G GD G+LGLG + R +P + + E +
Sbjct: 21 DVKKTKALPIVTHPSHGTVGGQVLTL-GQGDVGQLGLGEDIMERKKPALVTLTE--DIVQ 77
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG-ISENIGYSLEPLRISGLKKEVVQISTGYHH 134
A GG HT+ L +G +Y G ND G LG + G ++P ++ L ++VVQ+S G H
Sbjct: 78 AAAGGMHTVCLGASGSIYTFGCNDEGALGRDTSEEGSEMQPGKVE-LAEKVVQVSAGDSH 136
Query: 135 SSAITVDGELYMWG--KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
++A+T DG ++++G +++NG +GL + K + +P +V+ + + + A G + V +
Sbjct: 137 TAALTEDGRVFVFGSFRDNNGVIGLLEPMKKSM-VPVQVQINTPVI--KIASGNDHLVLL 193
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL---EGVKVKIAAAGFLH 249
T G + + G G G+LG E R T+ + ++ L + + +K +G +H
Sbjct: 194 TVDGDLYTSGCGEQGQLGRVPE-------RFTNRGGRKGLERLLVPQCIHLKAKGSGRVH 246
Query: 250 ----------SACIDENGRVYIFGDRAVDKMLFQEGNHARRPS----------------- 282
+ + + G VY FG ++ + P
Sbjct: 247 FQDVFCGAYFTFAVSQEGHVYGFGLSNYHQLGTKNTQACYAPQNLTSFKNSTKSWIGFSG 306
Query: 283 -------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQG-PFSESP-VDQVSCGWKHT 333
+ S G+ Y+ G E G LG+G ++ E+ + P + P ++ V+ G +
Sbjct: 307 GQHHTVCVDSEGKAYSLGRAEYGRLGLGE----NAEEQSEPTPIPDLPKINSVASGASVS 362
Query: 334 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN--FGENVKALQVS 390
A+S +G + WG G + QLG G + D P + E+ + L VS
Sbjct: 363 YAVSTDGCVFAWGMG------------TNLQLGTGEEEDVWSPEQMTGKHLEDREVLSVS 410
Query: 391 CGFNHTGALL 400
G HT L+
Sbjct: 411 SGGQHTVLLV 420
Score = 36.2 bits (82), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 286 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTW 344
GG++ T G + G LG+G D++ + +E V Q + G HT + + G I T+
Sbjct: 40 GGQVLTLGQGDVGQLGLGE-DIMERKKPALVTLTEDIV-QAAAGGMHTVCLGASGSIYTF 97
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G G D G ++ P V E K +QVS G +HT AL E
Sbjct: 98 GCN-DEGALGRDTSEEGSEM---------QPGKVELAE--KVVQVSAGDSHTAALTE 142
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 82.0 bits (201), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 105/245 (42%), Gaps = 32/245 (13%)
Query: 162 AKVIPIPTKVECLSG-IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A V P P + L+ + +Q LG E + + G+V SWGAG G+LGHG
Sbjct: 145 AYVTPEPPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGT------- 197
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNHAR 279
+E PRL++ L+G+++ AAG HS C+ E G +YI+G + + L
Sbjct: 198 --LEAELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTEN 255
Query: 280 RPSLISGGELYTWGSNENGCLGIGS-----IDVLHSPERVQGPFSESPVDQVSCGWKHTA 334
+ EL G E + I + P + P V SCG +HTA
Sbjct: 256 KAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAV-MASCGSRHTA 314
Query: 335 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF--GENVKALQVSC 391
++ G++ TWGWG GQLGH + P V + ++ V+C
Sbjct: 315 VVTRTGELYTWGWGKY------------GQLGHKDSTSLDRPCCVEYFVERQLEVRAVTC 362
Query: 392 GFNHT 396
G +T
Sbjct: 363 GPWNT 367
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 69/150 (46%), Gaps = 36/150 (24%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG G+LE+ P + A + + +A GG H++ L+ETG +Y G N+ GQ
Sbjct: 185 WGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQ 244
Query: 103 LGI-----SENIGYSLEPLRIS--GLKKEV-----------------------------V 126
L + +EN E ++ GLK+E+ V
Sbjct: 245 LALPTRSGTENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAV 304
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLG 156
S G H++ +T GELY WG GQLG
Sbjct: 305 MASCGSRHTAVVTRTGELYTWGWGKYGQLG 334
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 76/192 (39%), Gaps = 37/192 (19%)
Query: 62 PVVCSAFEKH-SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P C ++ L G H L L G V++ G GQLG + LEP +
Sbjct: 151 PPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHG-TLEAELEPRLLEA 209
Query: 121 LK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK---------------- 163
L+ + +++ G HS ++ G++Y+WG N +GQL L ++
Sbjct: 210 LQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDG 269
Query: 164 ------------------VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
+ P P ++ G A+ G + VT G++ +WG G
Sbjct: 270 LKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGK 329
Query: 206 SGRLGHGQESSI 217
G+LGH +S+
Sbjct: 330 YGQLGHKDSTSL 341
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 103/232 (44%), Gaps = 35/232 (15%)
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
+ +Q LG E ++ + G+V SWG G G+LGHG +E PRL++ L+
Sbjct: 158 LRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT---------LEAELEPRLLEALQ 208
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS---------GG 287
G+ + AAG HS C+ E G +YI+G ++ N A ++ G
Sbjct: 209 GLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGS 268
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGW 346
++ G E+G I V P + P V + SCG +HTA ++ G++ TWGW
Sbjct: 269 QVKRTGGAEDGAPAP-FIAVQPFPALLDLPMGSDAV-KASCGSRHTAVVTRTGELYTWGW 326
Query: 347 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF--GENVKALQVSCGFNHT 396
G GQLGH + P V + + ++ V+CG +T
Sbjct: 327 GKY------------GQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWNT 366
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG G+LE+ P + A + + +A GG H++ ++ETG +Y G N+ GQ
Sbjct: 182 WGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQ 241
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
L + P R E V ++ + DG + + G
Sbjct: 242 LAL---------PTRNLAEDGETVA-----REATELNEDGSQVK--RTGGAEDGAPAPFI 285
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
V P P ++ G +A+ G + VT G++ +WG G G+LGH +S+
Sbjct: 286 AVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSL 340
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 91/221 (41%), Gaps = 14/221 (6%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
Q+ G H+ + G+++ WG +GQLG G A++ P +E L G+ + A G
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEL--EPRLLEALQGLVMAEVAAGG 219
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
SV V+ G + WG SG+L + L E R EL ++ G
Sbjct: 220 WHSVCVSETGDIYIWGWNESGQLALPTRN-----LAEDGETVAREATELNEDGSQVKRTG 274
Query: 247 FLHSACIDENGRVYIFG---DRAVDKMLFQEGNHARRPSLIS-GGELYTWGSNENGCLGI 302
V F D + + +R ++++ GELYTWG + G LG
Sbjct: 275 GAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGH 334
Query: 303 GSIDVLHSPERVQGPFSES-PVDQVSCG-WK-HTAAISEGK 340
L P RV+ + V V+CG W + A+ +GK
Sbjct: 335 EDTTSLDRPRRVEYFVDKQLQVKAVTCGPWNTYVYAVEKGK 375
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 34/147 (23%)
Query: 283 LISGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAISE- 338
L + G++++WG +G LG G+++ P E +QG + +V+ G H+ +SE
Sbjct: 173 LDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLV----MAEVAAGGWHSVCVSET 228
Query: 339 GKILTWGWGGS------HGTFSEDGHS----------SGGQLGH------GNDVDYI--- 373
G I WGW S +EDG + G Q+ G +I
Sbjct: 229 GDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQ 288
Query: 374 -HPTIVNFGENVKALQVSCGFNHTGAL 399
P +++ A++ SCG HT +
Sbjct: 289 PFPALLDLPMGSDAVKASCGSRHTAVV 315
>sp|P25171|RCC1_DROME Regulator of chromosome condensation OS=Drosophila melanogaster
GN=Bj1 PE=1 SV=2
Length = 547
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 161/378 (42%), Gaps = 73/378 (19%)
Query: 42 LWGNGDYGRLGLGS--LE-SRWRPV--VCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
+ GNGD G+LGLG LE R PV + A + ++ GG H L LT++G +Y+ G
Sbjct: 46 VCGNGDVGQLGLGEDILERKRLSPVAGIPDAVD------ISAGGMHNLVLTKSGDIYSFG 99
Query: 97 LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQ 154
ND G LG + S + L + + IS G HS+ + DG ++ WG ++S+G
Sbjct: 100 CNDEGALGRDTSEDGSESKPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRDSHGN 159
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
+GL K PI + + G A G + V +T GKV + G G+LG E
Sbjct: 160 MGLTIDGNKRTPI----DLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSE 215
Query: 215 SSILG--------FLRSTSEYTPRLIKELEGV-------------KVKIAAAGFLHSACI 253
SI G LR T R K E + I A G + +
Sbjct: 216 RSISGEGRRGKRDLLRPTQLIITR-AKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQL 274
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYT-----------WGSNENGCLGI 302
+ F + K ++ H I+GG+ +T G E G LG+
Sbjct: 275 AHETKGKEFALTPI-KTELKDIRH------IAGGQHHTVILTTDLKCSVVGRPEYGRLGL 327
Query: 303 GSI-DVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 360
G + DV+ P V+ +E V V CG + A++ +GK+ +WG G ++
Sbjct: 328 GDVKDVVEKPTIVKK-LTEKIV-SVGCGEVCSYAVTIDGKLYSWGSGVNN---------- 375
Query: 361 GGQLGHGNDVDYIHPTIV 378
QLG G+ D + P +V
Sbjct: 376 --QLGVGDGDDELEPIVV 391
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 79/182 (43%), Gaps = 28/182 (15%)
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMW 147
G V G D GQLG+ E+I LE R+S + + V IS G H+ +T G++Y +
Sbjct: 42 GNVLVCGNGDVGQLGLGEDI---LERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDIYSF 98
Query: 148 GKNSNGQLGL------GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G N G LG + +I +P K C+S G S + G+V +W
Sbjct: 99 GCNDEGALGRDTSEDGSESKPDLIDLPGKALCISA--------GDSHSACLLEDGRVFAW 150
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
GS R HG +G ++ TP I +EG A+G H + G+V+
Sbjct: 151 ---GSFRDSHGN----MGLTIDGNKRTP--IDLMEGTVCCSIASGADHLVILTTAGKVFT 201
Query: 262 FG 263
G
Sbjct: 202 VG 203
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 24/131 (18%)
Query: 139 TVDGELYMWGKNSNGQLGLG------KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
TV G + + G GQLGLG K+ + V IP V+ +G ++ +
Sbjct: 39 TVLGNVLVCGNGDVGQLGLGEDILERKRLSPVAGIPDAVDISAGGM---------HNLVL 89
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G + S+G G LG +++S G SE P LI +L G K +AG HSAC
Sbjct: 90 TKSGDIYSFGCNDEGALG--RDTSEDG-----SESKPDLI-DLPG-KALCISAGDSHSAC 140
Query: 253 IDENGRVYIFG 263
+ E+GRV+ +G
Sbjct: 141 LLEDGRVFAWG 151
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 143/311 (45%), Gaps = 36/311 (11%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
++K +ACG T LT+ G + G G LG S + + L E+VQ++ G
Sbjct: 398 TIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACG 457
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
H A++ DGEL+ WG+ G+LGLG + + P +V G ++ G + S+
Sbjct: 458 ASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCP--QQVPVAPGQEAQRVVCGIDSSMI 515
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LH 249
+T G+VL+ G+ +LG L L E P +++E A F L
Sbjct: 516 LTSPGRVLACGSNRFNKLG-------LDHLSLDEEPVP--YQQVE------EALSFTPLG 560
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLH 309
SA +D+ + +L + A ++ + G+ YT+GSN++G LG S V
Sbjct: 561 SAPLDQ------------EPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSR 608
Query: 310 SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 368
+P RVQG + V+CG T A+ +EG++ +WG G+ G +G L
Sbjct: 609 APCRVQG-LEGIKMVMVACGDAFTVAVGAEGEVYSWG-KGTRGRLGRRDEDAG--LPRPV 664
Query: 369 DVDYIHPTIVN 379
+D HP +V
Sbjct: 665 QLDETHPYMVT 675
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 126/326 (38%), Gaps = 62/326 (19%)
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK---- 170
PLR+ L EVVQ++ G + +T G L +W G G G + +P
Sbjct: 330 PLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGG-GTLLPGAVELPQPQFVS 388
Query: 171 --VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
+E SG+ K A G + +T G ++++G+G +G LGHG + I
Sbjct: 389 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDI---------SQ 439
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF--------------GDRAVDKMLFQE 274
P +++ L G ++ A G H + +G ++ + ++
Sbjct: 440 PTIVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAP 499
Query: 275 GNHARRPS--------LISGGELYTWGSNENGCLGIGSIDVLHSPERVQ--------GPF 318
G A+R L S G + GSN LG+ + + P Q P
Sbjct: 500 GQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPL 559
Query: 319 SESPVDQ-----VSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 373
+P+DQ V G H+AAI+ G TF + H GQLG +
Sbjct: 560 GSAPLDQEPLLCVDLGTAHSAAITA--------SGDCYTFGSNQH---GQLGTSSRRVSR 608
Query: 374 HPTIVNFGENVKALQVSCGFNHTGAL 399
P V E +K + V+CG T A+
Sbjct: 609 APCRVQGLEGIKMVMVACGDAFTVAV 634
>sp|P21827|RCC1_YEAST Guanine nucleotide exchange factor SRM1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SRM1 PE=1 SV=1
Length = 482
Score = 78.6 bits (192), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 90/187 (48%), Gaps = 19/187 (10%)
Query: 43 WGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGNG +LG +E R + + F +K +A G H LT+ + + GLN FG
Sbjct: 245 WGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFG 304
Query: 102 QLGISENI---GYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
Q G+SE++ +P R++ V++ I+ G HHS ++ DG+LY G+ ++G+
Sbjct: 305 QCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGI 364
Query: 158 GKK------------AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
K A+ +P+PTK+ + K A G SVAV G SWG G
Sbjct: 365 PKDNLPEYTYKDVHGKARAVPLPTKLNNVPKF--KSVAAGSHHSVAVAQNGIAYSWGFGE 422
Query: 206 SGRLGHG 212
+ +G G
Sbjct: 423 TYAVGLG 429
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 91/209 (43%), Gaps = 8/209 (3%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RIS 119
P F K+++ LA G H LFL E G V+A G QLG + L+ L R
Sbjct: 212 PWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPF 271
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK--VIPIPTKVECLSGI 177
GL + V I++G +H A+T D +L WG N GQ G+ + ++ P ++ +
Sbjct: 272 GL-RHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNV 330
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES---SILGFLRSTSEYTPRLIKE 234
+ A G S+ ++ G + S G +G +++ + + P K
Sbjct: 331 VIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKL 390
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFG 263
K K AAG HS + +NG Y +G
Sbjct: 391 NNVPKFKSVAAGSHHSVAVAQNGIAYSWG 419
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 82/204 (40%), Gaps = 36/204 (17%)
Query: 43 WGNGDYGRLGLGSLESRW---RPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGL 97
WG G LGLG L RP + + K + A GG HTL L E V++ G
Sbjct: 51 WGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVWSWGC 110
Query: 98 NDFGQLG-ISENIGYSLE---------------------PLRISGLK-------KEVVQI 128
ND G LG + N L+ P +I +VVQ+
Sbjct: 111 NDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGHKVVQL 170
Query: 129 STGYHHSSAITVDGELYMWG--KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
+ + S A+ +GE+Y WG + + G LG + K+ P KV S Q A G
Sbjct: 171 AATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGK 230
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLG 210
+ + + G V +WG G +LG
Sbjct: 231 DHILFLDEEGMVFAWGNGQQNQLG 254
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 93/240 (38%), Gaps = 37/240 (15%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK-------KAAKVIPIPTKVECLSGI 177
++ Y H +++ WG S +LGLG K ++ P + E
Sbjct: 29 IINAQEDYKHMYLSVQPLDIFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIIS 88
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG----HGQESSILGFLRSTSEYTPRLIK 233
F A+G ++A+ V SWG G LG + +E +S+ +
Sbjct: 89 F----AVGGMHTLALDEESNVWSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLN 144
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWG 293
ELE KI F A E +V A D M +L S GE+Y WG
Sbjct: 145 ELESTPAKIPRESFPPLA---EGHKVVQLA--ATDNM---------SCALFSNGEVYAWG 190
Query: 294 S---NENGCLGI--GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 347
+ NE G LG I + +P +V FS+ + Q++ G H + EG + WG G
Sbjct: 191 TFRCNE-GILGFYQDKIKIQKTPWKVPT-FSKYNIVQLAPGKDHILFLDEEGMVFAWGNG 248
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 20/188 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD GRLGL + +S P S + + CG ++ ++ + A G N F +
Sbjct: 474 WGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNK 533
Query: 103 LGISENIGYSLEPLRISGLKK---------------EVVQISTGYHHSSAITVDGELYMW 147
LG+ + G EP +++ ++V I G HS A+T G+ + +
Sbjct: 534 LGLDKVSGTE-EPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTF 592
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G N +GQLG + + +P +V L GI AA G ++A+ G+V +WG G G
Sbjct: 593 GSNQHGQLGCSHRRSSRVPY--QVSGLQGI--TMAACGDAFTLAIGAEGEVYTWGKGARG 648
Query: 208 RLGHGQES 215
RLG +E
Sbjct: 649 RLGRKEED 656
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 128/289 (44%), Gaps = 35/289 (12%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQIST 130
++K+++CG T LT+ G + G G LG N +P + L E+VQ+S
Sbjct: 399 TIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLG-HGNFNDVTQPKIVEALLGYELVQVSC 457
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G H A+T + E++ WG+ NG+LGL + + P +V + ++ G + S+
Sbjct: 458 GASHVLAVTNEREVFSWGRGDNGRLGLATQDSH--NCPQQVSLPADFEAQRVLCGVDCSM 515
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
++ ++L+ G +LG L + T E P ++E V + + S
Sbjct: 516 IMSTQHQILACGNNRFNKLG-------LDKVSGTEE--PSSFCQVEEVHL----FQLVQS 562
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDVLHS 310
A ++ VYI + A ++ G+ +T+GSN++G LG
Sbjct: 563 APLNTEKIVYI------------DIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRV 610
Query: 311 PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG--GSHGTFSED 356
P +V G + +CG T AI +EG++ TWG G G G ED
Sbjct: 611 PYQVSG---LQGITMAACGDAFTLAIGAEGEVYTWGKGARGRLGRKEED 656
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 102/236 (43%), Gaps = 45/236 (19%)
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIP--IPTK 170
PLR+ L EV+Q+S G +T G L W S +G+ L ++ P I
Sbjct: 332 PLRLPMLNTEVIQVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVEQMQPQFISRF 391
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
+E SG+ K + G + +T G ++++G+G +G LGHG + + P+
Sbjct: 392 LEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDV---------TQPK 442
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELY 290
+++ L G ++ + G H + N R E++
Sbjct: 443 IVEALLGYELVQVSCGASHVLAVT-NER-----------------------------EVF 472
Query: 291 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 345
+WG +NG LG+ + D + P++V P ++ +V CG + +S + +IL G
Sbjct: 473 SWGRGDNGRLGLATQDSHNCPQQVSLP-ADFEAQRVLCGVDCSMIMSTQHQILACG 527
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 106/251 (42%), Gaps = 26/251 (10%)
Query: 27 CKRWISSTLQRR-FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF 85
C ++ L R +G+G G LG G+ +P + A + L ++CG +H L
Sbjct: 405 CGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLA 464
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGEL 144
+T V++ G D G+LG++ ++ P ++S E ++ G S ++ ++
Sbjct: 465 VTNEREVFSWGRGDNGRLGLATQDSHNC-PQQVSLPADFEAQRVLCGVDCSMIMSTQHQI 523
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIP-TKVECLSGIFTKQAA-----------LGFEQSVAV 192
G N +LGL K + P +VE + Q+A +G SVAV
Sbjct: 524 LACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAV 583
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+ ++G+ G+LG S P + L+G + +AA G +
Sbjct: 584 TEKGQCFTFGSNQHGQLGCSHRR---------SSRVPYQVSGLQG--ITMAACGDAFTLA 632
Query: 253 IDENGRVYIFG 263
I G VY +G
Sbjct: 633 IGAEGEVYTWG 643
Score = 40.8 bits (94), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 54/122 (44%), Gaps = 24/122 (19%)
Query: 287 GELYTWGSNENGCLGIGSIDVLHSPERVQGPF--------SESPVDQVSCGWKHTAAISE 338
G L TW E +G G + + E++Q F S + VSCG T +++
Sbjct: 359 GRLITW---EAPSVGSGEPTLPGAVEQMQPQFISRFLEGQSGVTIKSVSCGDLFTTCLTD 415
Query: 339 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 397
G I+T+G G S G LGHGN D P IV + +QVSCG +H
Sbjct: 416 RGIIMTFGSG------------SNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASHVL 463
Query: 398 AL 399
A+
Sbjct: 464 AV 465
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 170/405 (41%), Gaps = 88/405 (21%)
Query: 36 QRRFAALWGNGDYGRLGLGSLE------SRWRPVVCSAFEKHSLKALACGGAHTLFLTET 89
+R ++G+G LG+G E R P++ + +K + LA GG H+ L+
Sbjct: 69 ERLNVYVFGSGSMNELGMGEEEMDVVYRPRLNPILST--DKVGVVDLAVGGMHSAALSHD 126
Query: 90 GCVYATGLNDFGQLG------ISEN---IGYSL---EPLRISGLKK--EVVQISTGYHHS 135
G VY G+ND LG EN + L P ++ G V ++ + +
Sbjct: 127 GRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLT 186
Query: 136 SAITVDGELYMWG--KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+AIT +G + WG + S+G LG + K PT++ L I Q A G + +A+T
Sbjct: 187 AAITDNGCCFTWGTFRCSDGVLGYS-DSQKRTAEPTQMR-LPEIC--QLATGTDHIIALT 242
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
GKV +WG G +LG + R TP+ + + V AG HS I
Sbjct: 243 TTGKVYTWGNGQQFQLGRR-----MLERRRLQGLTPQPLALKNIISV---GAGSYHSFAI 294
Query: 254 DENGRVYIFG-----DRAVDKMLFQEGNHARRPSL-----------ISGGELYT------ 291
D GRVY +G ++ +EG +P+L I+GGE +T
Sbjct: 295 DNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLED 354
Query: 292 -----WGSNENGCLGIGS---IDVLHSPERVQGPFSESP--------VDQVSCGWKHTAA 335
WG ++ LGI + + E+ + +P V QV CG H A
Sbjct: 355 GRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLTNVIQVVCGTHHNLA 414
Query: 336 I-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG-NDVDYIHPTIV 378
+ S+GK+ +WG ++ ++G G ND D PT+V
Sbjct: 415 VTSDGKVYSWGSAENY------------EVGQGDNDEDVAVPTLV 447
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 85/187 (45%), Gaps = 28/187 (14%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENI----------- 109
+P + A E +++K++ G HTL L E G V A G +D QLGI +N
Sbjct: 326 KPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKG 385
Query: 110 -GYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
Y L P I GL V+Q+ G HH+ A+T DG++Y WG N ++G G V +
Sbjct: 386 NNYYLSTPTIIPGLTN-VIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVA-V 443
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
PT + A+ E ++ V G G S AG + + E + ++S E
Sbjct: 444 PT--------LVRSKAIK-EVAIRVAGAGGQFSIIAG----IPNASEEPVANGIKSEPEN 490
Query: 228 TPRLIKE 234
+L E
Sbjct: 491 EKKLKTE 497
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 146/364 (40%), Gaps = 67/364 (18%)
Query: 87 TETGCVYATGLNDFGQLGISE---NIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVD 141
TE VY G +LG+ E ++ Y L P+ +S K VV ++ G HS+A++ D
Sbjct: 68 TERLNVYVFGSGSMNELGMGEEEMDVVYRPRLNPI-LSTDKVGVVDLAVGGMHSAALSHD 126
Query: 142 GELYMWGKNSNGQLGLGKKAAK-----------VIPIPTKVE-CLSGIFTKQAALGFEQS 189
G +Y WG N + LG K K + P+KVE LS + + +
Sbjct: 127 GRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLT 186
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS---TSEYTPRLIKELEGVKVKIAAAG 246
A+T G +W G+ R G +LG+ S T+E T + E+ + A G
Sbjct: 187 AAITDNGCCFTW---GTFRCSDG----VLGYSDSQKRTAEPTQMRLPEICQL-----ATG 234
Query: 247 FLHSACIDENGRVYIFGD----RAVDKMLFQEGNHARRP-------------------SL 283
H + G+VY +G+ + +ML + P ++
Sbjct: 235 TDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKNIISVGAGSYHSFAI 294
Query: 284 ISGGELYTWGSNENGCLGIGSID-----VLHSPERVQGPFSESPVDQVSCGWKHTAAISE 338
+ G +Y WG N GI D V+ P V V ++ G HT A+ E
Sbjct: 295 DNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDA-LEGYNVKSITGGEHHTLALLE 353
Query: 339 -GKILTWGWGGSHGTFSEDG--HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 395
G++L WG H D + + GN+ PTI+ NV +QV CG +H
Sbjct: 354 DGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLTNV--IQVVCGTHH 411
Query: 396 TGAL 399
A+
Sbjct: 412 NLAV 415
>sp|Q9P2D0|IBTK_HUMAN Inhibitor of Bruton tyrosine kinase OS=Homo sapiens GN=IBTK PE=1
SV=3
Length = 1353
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
++Y WG N+N LG G + +K P + SGI+ KQ L SV ++ G+V + G
Sbjct: 143 DVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCG 202
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G GRLGHG E + L PRL++ L G AA H+ + E+G VY F
Sbjct: 203 HGPGGRLGHGDEQTCL---------VPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTF 253
Query: 263 G 263
G
Sbjct: 254 G 254
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+G GRLG G ++ P + H+ +A HT+ LTE GCVY GLN F QL
Sbjct: 202 GHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQL 261
Query: 104 GI-----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG-- 156
GI S N+ ++ + G + ++ ++ G H+ T + +Y G N GQLG
Sbjct: 262 GIIPPPSSCNVPRQIQAKYLKG--RTIIGVAAGRFHTVLWTREA-VYTMGLN-GGQLGCL 317
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
L K + P +V S + K AL VA + G V
Sbjct: 318 LDPNGEKCVTAPRQV---SALHHKDIALSL---VAASDGATV 353
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 105/253 (41%), Gaps = 16/253 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKH--SLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ LG GS S+ P + F + +K + H++FL++ G VY G
Sbjct: 147 WGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPG 206
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + L P + GL Q++ H+ +T DG +Y +G N QLG+
Sbjct: 207 GRLGHGDE-QTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIP 265
Query: 160 KAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ +P + + L G A G +V T V + G G GQ +L
Sbjct: 266 PPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMGLNG------GQLGCLL 318
Query: 219 GFLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
PR + L + + + + AA + C+ G +Y+ D KM ++ N
Sbjct: 319 DPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQCKKMASKQLN 378
Query: 277 HARRPSLISGGEL 289
+ L+SGG +
Sbjct: 379 LKK--VLVSGGHM 389
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 55/117 (47%), Gaps = 16/117 (13%)
Query: 288 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES--PVDQVSCGWKHTAAISE-GKILTW 344
++YTWG N N LG GS + H PE V FS S + QV H+ +S+ G++ T
Sbjct: 143 DVYTWGDNTNFTLGHGSQNSKHHPELVDL-FSRSGIYIKQVVLCKFHSVFLSQKGQVYTC 201
Query: 345 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 401
G H GG+LGHG++ + P +V QV+ +HT L E
Sbjct: 202 G------------HGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTE 246
>sp|Q54VW7|GACGG_DICDI Rho GTPase-activating protein gacGG OS=Dictyostelium discoideum
GN=gacGG PE=3 SV=1
Length = 1203
Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 91/231 (39%), Gaps = 46/231 (19%)
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
+ GY+HS A+T GELY WG N + QL KA I P K++ + K + G
Sbjct: 39 MDNGYNHSLALTETGELYGWGDNRHHQLS-SNKAITSIDKPIKIQVIPNQRVKSISCGGN 97
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
S A+ G + WG G G ES P + L+GV + G
Sbjct: 98 FSAAIMENGLLYVWGTLIEG--GKCTES-------------PTKVDLLKGVTC--VSIGI 140
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSNENGCLGIGSIDV 307
H A + A P+ +YTWG+N G LG+ +
Sbjct: 141 NHCAVV------------------------ADSPTTPEKRSVYTWGTNRKGQLGVVGDSI 176
Query: 308 LHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWGWGGSHGTFSEDG 357
++P RV S V CG + TAAI EG ++ WG+ S S +
Sbjct: 177 TNAPRRVTLG---SKAISVCCGEEFTAAIVEGNEVFVWGYNKSRQICSNNS 224
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 127/316 (40%), Gaps = 62/316 (19%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSA 137
G H+L LTETG +Y G N QL ++ I +P++I + + V+ IS G + S+A
Sbjct: 42 GYNHSLALTETGELYGWGDNRHHQLSSNKAITSIDKPIKIQVIPNQRVKSISCGGNFSAA 101
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG- 196
I +G LY+WG G K PTKV+ L G+ ++G V
Sbjct: 102 IMENGLLYVWGTLIEG--------GKCTESPTKVDLLKGVTC--VSIGINHCAVVADSPT 151
Query: 197 -----KVLSWGAGGSGRLGHGQESSILGFLRST-----------SEYTPRLIKELEGVKV 240
V +WG G+LG +S R T E+T ++ EG +V
Sbjct: 152 TPEKRSVYTWGTNRKGQLGVVGDSITNAPRRVTLGSKAISVCCGEEFTAAIV---EGNEV 208
Query: 241 KIAAAGFLHSACIDENGR-----VYIFGDRAVDKMLFQEGNHARRPSLISGGELYTWGSN 295
+ C + + V F R + ++ + A R + G + WGSN
Sbjct: 209 FVWGYNKSRQICSNNSDEIISIPVKPFLGRDIVELSCTKNYIAARSGV---GNVCVWGSN 265
Query: 296 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFS 354
E C IG ++ P +++ Q+S H +SE G+I +W
Sbjct: 266 EQVC-RIGDDKFINFPNKIK---------QISASTSHILVLSEKGEIFSW---------- 305
Query: 355 EDGHSSGGQLGHGNDV 370
G+S QL H DV
Sbjct: 306 --GNSEDNQLSHKLDV 319
Score = 35.8 bits (81), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 70/197 (35%), Gaps = 58/197 (29%)
Query: 257 GRVYIFGDR---------AVDKMLFQEGNHARRPSLISGGELYTWGSNENGCL----GIG 303
G +Y +GD+ + + F + + +L GELY WG N + L I
Sbjct: 14 GVLYCWGDKFSGKPTFNPLIPNICFMDNGYNHSLALTETGELYGWGDNRHHQLSSNKAIT 73
Query: 304 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG----------------- 345
SID P ++Q V +SCG +AAI E G + WG
Sbjct: 74 SID---KPIKIQV-IPNQRVKSISCGGNFSAAIMENGLLYVWGTLIEGGKCTESPTKVDL 129
Query: 346 --------WGGSHGTFSED-------------GHSSGGQLGHGNDVDYIHPTIVNFGENV 384
G +H D G + GQLG D P V G
Sbjct: 130 LKGVTCVSIGINHCAVVADSPTTPEKRSVYTWGTNRKGQLGVVGDSITNAPRRVTLGS-- 187
Query: 385 KALQVSCGFNHTGALLE 401
KA+ V CG T A++E
Sbjct: 188 KAISVCCGEEFTAAIVE 204
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 154/404 (38%), Gaps = 69/404 (17%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA-----TG 96
+WG G L + WR + + G AH +T +Y G
Sbjct: 333 VWGGGKTTPQKLDVFKGGWRA-----------RQVCAGDAHFAVVTVEKELYTWVNMQGG 381
Query: 97 LNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
GQLG + Y +P + L+ K V ++S G + IT +G+LY +G + G L
Sbjct: 382 SKLHGQLGHGDRASYR-QPKHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCL 440
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G+ + A + P V+ Q + G +A+T V SWG G GRLG E
Sbjct: 441 GVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSED 500
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----- 270
+ Y+P+ ++ G+ + G S + G+V G +K+
Sbjct: 501 DV---------YSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQY 551
Query: 271 --------LFQEGNHARRPSLISG----------------------GELYTWGSNENGCL 300
FQE + +L G L T+GSN+ G L
Sbjct: 552 TAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQL 611
Query: 301 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKH-TAAISEGKILTWGWGGSHGTFSEDGHS 359
G+G + GP V +VSCG + TAA ++ I WG GG +G +
Sbjct: 612 GVGDYRKHLGINLLGGPLGGKQVIRVSCGDEFTTAATADNHIFAWGNGG-NGRLA----M 666
Query: 360 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 403
+ + G+D+ P + FG +SC HT ++E V
Sbjct: 667 TPNERPQGSDICTSWPRPI-FGSLHHVTDLSCRGWHTILIVEKV 709
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.137 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 163,860,633
Number of Sequences: 539616
Number of extensions: 7482896
Number of successful extensions: 20311
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 18461
Number of HSP's gapped (non-prelim): 593
length of query: 403
length of database: 191,569,459
effective HSP length: 120
effective length of query: 283
effective length of database: 126,815,539
effective search space: 35888797537
effective search space used: 35888797537
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)