BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015657
(403 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255578951|ref|XP_002530328.1| signal recognition particle protein, putative [Ricinus communis]
gi|223530132|gb|EEF32044.1| signal recognition particle protein, putative [Ricinus communis]
Length = 572
Score = 744 bits (1921), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/403 (93%), Positives = 392/403 (97%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEVSELVFAK PTVILLAGLQGVGKTTV AKLANYLKKQGKSCMLVAGDVYRPAAID
Sbjct: 170 MGGEVSELVFAKYSPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAID 229
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLVILGEQVGVPVYT GTEVKPS+IAK+GLEEAKKKN+DVVIVDTAGRLQIDK MMDELK
Sbjct: 230 QLVILGEQVGVPVYTEGTEVKPSEIAKRGLEEAKKKNIDVVIVDTAGRLQIDKGMMDELK 289
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+VKRVLNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVS
Sbjct: 290 EVKRVLNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVS 349
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVM+QEDAE++QKKIMSA
Sbjct: 350 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEDLQKKIMSA 409
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQTR VARMGSM+RVIGMIPGMGK+TPAQ+REAEKSLKIME+MIEAMTPEER
Sbjct: 410 KFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPAQIREAEKSLKIMESMIEAMTPEER 469
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 360
EKPELLAESP RRKR+AQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS+PALSNLE
Sbjct: 470 EKPELLAESPTRRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALSNLE 529
Query: 361 DALKSEQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFGGGS 403
DALK+EQKAPPGTARRKRRSESRRQF D AS+RPSPRGFG G+
Sbjct: 530 DALKAEQKAPPGTARRKRRSESRRQFADSASSRPSPRGFGSGN 572
>gi|359481606|ref|XP_002276439.2| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Vitis vinifera]
gi|297740127|emb|CBI30309.3| unnamed protein product [Vitis vinifera]
Length = 567
Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/400 (93%), Positives = 390/400 (97%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEVSELVFAKS PTVILLAGLQGVGKTTV AKLA YLKKQGKSCMLVAGDVYRPAAID
Sbjct: 165 MGGEVSELVFAKSGPTVILLAGLQGVGKTTVCAKLAFYLKKQGKSCMLVAGDVYRPAAID 224
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLVILGEQV VPVYTAGTEVKPSQIAKQGLEEA+KKN+DVVIVDTAGRLQIDKAMMDELK
Sbjct: 225 QLVILGEQVDVPVYTAGTEVKPSQIAKQGLEEARKKNIDVVIVDTAGRLQIDKAMMDELK 284
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
DVKR +NPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVS
Sbjct: 285 DVKRAINPTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALSVKEVS 344
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVM+QEDAEE+QKKIMSA
Sbjct: 345 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSA 404
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQTR VARMGSM+RV+GMIPGMGK+TPAQ+REAEKSLK+ME MIEAMTPEER
Sbjct: 405 KFDFNDFLKQTRAVARMGSMTRVLGMIPGMGKVTPAQIREAEKSLKMMEGMIEAMTPEER 464
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 360
EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS+PALSNLE
Sbjct: 465 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALSNLE 524
Query: 361 DALKSEQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFG 400
+ LKSEQKAPPGTARRKRRSESR+QF +PAS+RPSPRGFG
Sbjct: 525 ETLKSEQKAPPGTARRKRRSESRKQFAEPASSRPSPRGFG 564
>gi|224138482|ref|XP_002322825.1| predicted protein [Populus trichocarpa]
gi|222867455|gb|EEF04586.1| predicted protein [Populus trichocarpa]
Length = 576
Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/403 (88%), Positives = 384/403 (95%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEVSELVFAKS PTVILLAGLQGVGKTTV AKLANYLKKQGKSCML+AGDVYRPAAID
Sbjct: 174 MGGEVSELVFAKSAPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLIAGDVYRPAAID 233
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLVILGEQVGVPVYT GT+VKPS+IA++GL EAKKKN+DVVIVDTAGRLQIDK MMDELK
Sbjct: 234 QLVILGEQVGVPVYTEGTDVKPSEIARKGLSEAKKKNIDVVIVDTAGRLQIDKGMMDELK 293
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
DVK +LNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVS
Sbjct: 294 DVKLILNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVS 353
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIKLVGRGERMEDLEPFYP+RMAGRILGMGDVLSFVEKAQEVM+QEDAEE+QKKIMSA
Sbjct: 354 GKPIKLVGRGERMEDLEPFYPNRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSA 413
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
NFDFNDFLKQTR VA+MGSM+RVIGMIPGM K+TP QVREAEK+LKIMEAMIE MTPEER
Sbjct: 414 NFDFNDFLKQTRAVAKMGSMTRVIGMIPGMAKVTPGQVREAEKNLKIMEAMIEVMTPEER 473
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 360
EKPELLAESP RRKRVAQ SGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS+P+LSNLE
Sbjct: 474 EKPELLAESPERRKRVAQASGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPSLSNLE 533
Query: 361 DALKSEQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFGGGS 403
DALK++QKAPPGTARR+R++ES ++FVD S+RP P GFG +
Sbjct: 534 DALKTKQKAPPGTARRRRKTESSKRFVDSVSSRPGPHGFGSSN 576
>gi|449451269|ref|XP_004143384.1| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Cucumis sativus]
gi|449482550|ref|XP_004156318.1| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Cucumis sativus]
Length = 572
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/403 (91%), Positives = 390/403 (96%), Gaps = 1/403 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEVSELVF+KS PTVILLAGLQGVGKTTV AKLANYLKKQGKSCMLVAGDVYRPAAID
Sbjct: 171 MGGEVSELVFSKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAID 230
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLVILGEQVGVPVYTAGTEVKPS IAKQGL+EA+K VDVVIVDTAGRLQID+AMMDELK
Sbjct: 231 QLVILGEQVGVPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDRAMMDELK 290
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+VKRV+NPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS
Sbjct: 291 EVKRVINPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 350
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIKLVGRGERM+DLEPFYPDRMAGRILGMGDVLSFVEKAQEVM+QEDAEE+QKKI+SA
Sbjct: 351 GKPIKLVGRGERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSA 410
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQTR VARMGSM+RVIGMIPGMGK+TPAQVREAEKSLKIME+MIEAMTPEER
Sbjct: 411 KFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPAQVREAEKSLKIMESMIEAMTPEER 470
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 360
EKPELLAESP RRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS+PAL+NLE
Sbjct: 471 EKPELLAESPARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE 530
Query: 361 DALKSEQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFGGGS 403
+ALK+EQKAPPGTARRKRRSESR+QF + + TR SPRGFG G+
Sbjct: 531 EALKAEQKAPPGTARRKRRSESRKQFAN-SETRSSPRGFGSGN 572
>gi|15237580|ref|NP_196014.1| signal recognition particle subunit [Arabidopsis thaliana]
gi|586038|sp|P37107.1|SR54C_ARATH RecName: Full=Signal recognition particle 54 kDa protein,
chloroplastic; Short=54 chloroplast protein; Short=54CP;
Short=SRP54; Short=cpSRP54; AltName: Full=FFC; Flags:
Precursor
gi|396701|emb|CAA79981.1| 54CP [Arabidopsis thaliana]
gi|7406404|emb|CAB85514.1| signal recognition particle 54CP protein precursor [Arabidopsis
thaliana]
gi|15293131|gb|AAK93676.1| putative signal recognition particle 54CP protein precursor
[Arabidopsis thaliana]
gi|24030445|gb|AAN41376.1| putative signal recognition particle 54CP protein precursor
[Arabidopsis thaliana]
gi|332003291|gb|AED90674.1| signal recognition particle subunit [Arabidopsis thaliana]
Length = 564
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/403 (86%), Positives = 384/403 (95%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEVSEL FAKS PTVILLAGLQGVGKTTV AKLA YLKKQGKSCML+AGDVYRPAAID
Sbjct: 162 MGGEVSELQFAKSGPTVILLAGLQGVGKTTVCAKLACYLKKQGKSCMLIAGDVYRPAAID 221
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLVILGEQVGVPVYTAGT+VKP+ IAKQGL+EAKK NVDVVI+DTAGRLQIDK MMDELK
Sbjct: 222 QLVILGEQVGVPVYTAGTDVKPADIAKQGLKEAKKNNVDVVIMDTAGRLQIDKGMMDELK 281
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
DVK+ LNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVS
Sbjct: 282 DVKKFLNPTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALSVKEVS 341
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKA EVM+QEDAE++QKKIMSA
Sbjct: 342 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKATEVMRQEDAEDLQKKIMSA 401
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQTR VA+MGSM+RV+GMIPGMGK++PAQ+REAEK+L +MEAMIE MTPEER
Sbjct: 402 KFDFNDFLKQTRAVAKMGSMTRVLGMIPGMGKVSPAQIREAEKNLLVMEAMIEVMTPEER 461
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 360
E+PELLAESP RRKR+A+DSGKTEQQVS LVAQ+FQMRV+MKNLMGVMEGGS+PALS LE
Sbjct: 462 ERPELLAESPERRKRIAKDSGKTEQQVSALVAQIFQMRVKMKNLMGVMEGGSIPALSGLE 521
Query: 361 DALKSEQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFGGGS 403
DALK+EQKAPPGTARRKR+++SR++FV+ AS++P PRGFG G+
Sbjct: 522 DALKAEQKAPPGTARRKRKADSRKKFVESASSKPGPRGFGSGN 564
>gi|3746964|gb|AAC64139.1| signal recognition particle 54 kDa subunit precursor [Arabidopsis
thaliana]
Length = 564
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/403 (86%), Positives = 384/403 (95%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEVSEL FAKS PTVILLAGLQGVGKTTV AKLA YLKKQGKSCML+AGDVYRPAAID
Sbjct: 162 MGGEVSELQFAKSGPTVILLAGLQGVGKTTVCAKLACYLKKQGKSCMLIAGDVYRPAAID 221
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLVILGEQVGVPVYTAGT+VKP+ IAKQGL+EAKK NVDVVI+DTAGRLQIDK MMDELK
Sbjct: 222 QLVILGEQVGVPVYTAGTDVKPADIAKQGLKEAKKNNVDVVIMDTAGRLQIDKGMMDELK 281
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
DVK+ LNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVS
Sbjct: 282 DVKKFLNPTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALSVKEVS 341
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKA EVM+QEDAE++QKKIMSA
Sbjct: 342 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKATEVMRQEDAEDLQKKIMSA 401
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQTR VA+MGSM+RV+GMIPGMGK++PAQ+REAEK+L +MEAMIE MTPEER
Sbjct: 402 KFDFNDFLKQTRAVAKMGSMTRVLGMIPGMGKVSPAQIREAEKNLLVMEAMIEVMTPEER 461
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 360
E+PELLAESP RRKR+A+DSGKTEQQVS LVAQ+FQMRV+MKNLMGVMEGGS+PALS LE
Sbjct: 462 ERPELLAESPERRKRIAKDSGKTEQQVSALVAQIFQMRVKMKNLMGVMEGGSIPALSGLE 521
Query: 361 DALKSEQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFGGGS 403
DALK+EQKAPPGTARRKR+++SR++FV+ AS++P PRGFG G+
Sbjct: 522 DALKAEQKAPPGTARRKRKADSRKKFVESASSKPGPRGFGSGN 564
>gi|297810481|ref|XP_002873124.1| hypothetical protein ARALYDRAFT_487173 [Arabidopsis lyrata subsp.
lyrata]
gi|297318961|gb|EFH49383.1| hypothetical protein ARALYDRAFT_487173 [Arabidopsis lyrata subsp.
lyrata]
Length = 562
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/403 (86%), Positives = 384/403 (95%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEVSEL FAKS PTVILLAGLQGVGKTTV AKLA YLKKQGKSCML+AGDVYRPAAID
Sbjct: 160 MGGEVSELQFAKSGPTVILLAGLQGVGKTTVCAKLACYLKKQGKSCMLIAGDVYRPAAID 219
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLVILGEQVGVPVYTAGT+VKP+ IAKQGL+EAKK NVDVVI+DTAGRLQIDK MMDELK
Sbjct: 220 QLVILGEQVGVPVYTAGTDVKPADIAKQGLKEAKKNNVDVVIMDTAGRLQIDKGMMDELK 279
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
DVK+ LNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVS
Sbjct: 280 DVKKFLNPTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALSVKEVS 339
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKA EVM+QEDAE++QKKIMSA
Sbjct: 340 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKATEVMRQEDAEDLQKKIMSA 399
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQTR VA+MGSM+RV+GMIPGMGK++PAQ+REAEK+L +MEAMIE MTPEER
Sbjct: 400 KFDFNDFLKQTRAVAKMGSMTRVLGMIPGMGKVSPAQIREAEKNLLVMEAMIEVMTPEER 459
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 360
E+PELLAESP RRKR+A+DSGKTEQQVS LVAQ+FQMRV+MKNLMGVMEGGS+PALS LE
Sbjct: 460 ERPELLAESPERRKRIAKDSGKTEQQVSALVAQIFQMRVKMKNLMGVMEGGSIPALSGLE 519
Query: 361 DALKSEQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFGGGS 403
DALK+EQKAPPGTARRKR+++SR++FV+ AS++P PRGFG G+
Sbjct: 520 DALKAEQKAPPGTARRKRKADSRKKFVESASSKPGPRGFGSGN 562
>gi|357511109|ref|XP_003625843.1| Signal recognition particle 54 kDa protein [Medicago truncatula]
gi|355500858|gb|AES82061.1| Signal recognition particle 54 kDa protein [Medicago truncatula]
Length = 553
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/400 (88%), Positives = 380/400 (95%), Gaps = 1/400 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEVSEL FAK+ PTVILLAGLQGVGKTTV AKLANY KKQGKSCMLVAGDVYRPAAID
Sbjct: 152 MGGEVSELTFAKTGPTVILLAGLQGVGKTTVCAKLANYFKKQGKSCMLVAGDVYRPAAID 211
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ILG+QV VPVYTAGT+VKPS IAKQG EEAKKK +DVVIVDTAGRLQIDKAMMDELK
Sbjct: 212 QLTILGKQVDVPVYTAGTDVKPSDIAKQGFEEAKKKKIDVVIVDTAGRLQIDKAMMDELK 271
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
DVKRVLNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVS
Sbjct: 272 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVS 331
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAE++QKKIMSA
Sbjct: 332 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEDLQKKIMSA 391
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQTR VA+MGS+SRVIGMIPGM K+TPAQ+REAE++L+IME +I+AMTPEER
Sbjct: 392 KFDFNDFLKQTRAVAQMGSVSRVIGMIPGMAKVTPAQIREAERNLEIMEVIIKAMTPEER 451
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 360
EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS+P LSNLE
Sbjct: 452 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSMPTLSNLE 511
Query: 361 DALKSEQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFG 400
+ALK+E+KAPPGTARR++++ESRR F D ++ R PRGFG
Sbjct: 512 EALKTEEKAPPGTARRRKKAESRRLFAD-STLRQPPRGFG 550
>gi|356572574|ref|XP_003554443.1| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Glycine max]
Length = 565
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/400 (90%), Positives = 382/400 (95%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEVSELVFAKS PTVILLAGLQGVGKTTV AKLANYLKKQGKSCMLVAGDVYRPAAID
Sbjct: 163 MGGEVSELVFAKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAID 222
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ILG+QV VPVYTAGT+VKPS+IAKQGLEEAKKK +DVVIVDTAGRLQIDK MMDELK
Sbjct: 223 QLAILGKQVDVPVYTAGTDVKPSEIAKQGLEEAKKKKIDVVIVDTAGRLQIDKTMMDELK 282
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+VK+ LNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVS
Sbjct: 283 EVKKALNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVS 342
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQ+VM+QEDAEE+QKKIMSA
Sbjct: 343 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQQVMRQEDAEELQKKIMSA 402
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQTRTVA+MGS+SRVIGMIPGMGK+TPAQ+R+AEK+L+ MEAMIEAMTPEER
Sbjct: 403 KFDFNDFLKQTRTVAKMGSVSRVIGMIPGMGKVTPAQIRDAEKNLQNMEAMIEAMTPEER 462
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 360
EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME GSLP LSNLE
Sbjct: 463 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMESGSLPTLSNLE 522
Query: 361 DALKSEQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFG 400
+ALK+E+KAPPGTARR++RSESR F D RPSPRGFG
Sbjct: 523 EALKAEEKAPPGTARRRKRSESRSVFGDSTPARPSPRGFG 562
>gi|356505382|ref|XP_003521470.1| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Glycine max]
Length = 565
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/400 (90%), Positives = 381/400 (95%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEVSELVFAKS PTVILLAGLQGVGKTTV AKLANYLKKQGKSCMLVAGDVYRPAAID
Sbjct: 163 MGGEVSELVFAKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAID 222
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ILG+QV VPVYTAGT+VKPS+IAKQGLEEAKKK +DVVIVDTAGRLQIDK MMDELK
Sbjct: 223 QLAILGKQVDVPVYTAGTDVKPSEIAKQGLEEAKKKKIDVVIVDTAGRLQIDKTMMDELK 282
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+VK+ LNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVS
Sbjct: 283 EVKKALNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVS 342
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQ+VM+QEDAEE+QKKIMSA
Sbjct: 343 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQQVMRQEDAEELQKKIMSA 402
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQTRTVA+MGS+SRVIGMIPGMGK+TPAQ+R+AEK+L MEAMIEAMTPEER
Sbjct: 403 KFDFNDFLKQTRTVAKMGSVSRVIGMIPGMGKVTPAQIRDAEKNLLNMEAMIEAMTPEER 462
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 360
EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME GSLP LSNLE
Sbjct: 463 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMESGSLPTLSNLE 522
Query: 361 DALKSEQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFG 400
+ALK+E+KAPPGTARR++RSESR F D RPSPRGFG
Sbjct: 523 EALKAEEKAPPGTARRRKRSESRSVFGDSTPARPSPRGFG 562
>gi|440583671|emb|CCH47177.1| similar to signal recognition particle 54 kDa protein [Lupinus
angustifolius]
Length = 731
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/414 (84%), Positives = 383/414 (92%), Gaps = 14/414 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGE SELVFAKS PTVILLAGLQGVGKTTV AKLANYLKKQGKSCMLVAGDVYRPAAID
Sbjct: 169 MGGEFSELVFAKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAID 228
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ILG+QV VPVYTAGT+VKPS+IA+QGLEEAKKKN+DVV+VDTAGRLQI+K+MMDELK
Sbjct: 229 QLAILGKQVDVPVYTAGTDVKPSEIARQGLEEAKKKNIDVVVVDTAGRLQINKSMMDELK 288
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+VK+VLNPTE+LLVVDAMTGQEAAALVTTFN+EIGITGAIL+KLDGDSRGGAALSVKEVS
Sbjct: 289 EVKQVLNPTEILLVVDAMTGQEAAALVTTFNLEIGITGAILSKLDGDSRGGAALSVKEVS 348
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEK++EVMQQEDAEE+QKKIMSA
Sbjct: 349 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKSKEVMQQEDAEELQKKIMSA 408
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQTR+VARMGS+SRVIGMIPGM K+TPAQ+R+AEK+L+I EAMIEAMTPEER
Sbjct: 409 KFDFNDFLKQTRSVARMGSVSRVIGMIPGMAKVTPAQIRDAEKNLQITEAMIEAMTPEER 468
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 360
EKPELLAESP RRKRVAQDSGKTEQQVSQLVAQ+FQMRVRMKNL+GVMEGGS+PALSNLE
Sbjct: 469 EKPELLAESPERRKRVAQDSGKTEQQVSQLVAQIFQMRVRMKNLLGVMEGGSMPALSNLE 528
Query: 361 DALKSEQK--------------APPGTARRKRRSESRRQFVDPASTRPSPRGFG 400
++LK+E+K APPGTARR+RR ESR+QF + S RP RGF
Sbjct: 529 ESLKTEEKIQNLDAYLFLHSCQAPPGTARRRRRPESRKQFANSTSARPDARGFA 582
>gi|224088549|ref|XP_002308469.1| predicted protein [Populus trichocarpa]
gi|222854445|gb|EEE91992.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/368 (91%), Positives = 357/368 (97%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEVSELVFAKS PTVILLAGLQGVGKTT+ AKLANYLKKQGKSCMLVAGDVYRPAAID
Sbjct: 174 MGGEVSELVFAKSGPTVILLAGLQGVGKTTICAKLANYLKKQGKSCMLVAGDVYRPAAID 233
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLVILGEQVGV VYT GT+VKPS+IA++GL EAKKKN+DVVIVDTAGRLQIDKAMMDELK
Sbjct: 234 QLVILGEQVGVSVYTEGTDVKPSEIARKGLAEAKKKNIDVVIVDTAGRLQIDKAMMDELK 293
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
DVKRVLNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKE+S
Sbjct: 294 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEIS 353
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAE++QKKIMSA
Sbjct: 354 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEDLQKKIMSA 413
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
NFDFNDFLKQTR VA+MGSM+RV+GMIPGM K+TPAQ+REAEKSLKIME MIEAMTPEER
Sbjct: 414 NFDFNDFLKQTRAVAKMGSMTRVLGMIPGMAKVTPAQIREAEKSLKIMEGMIEAMTPEER 473
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 360
EKPELLAESP RRKR+AQ SGKTEQQVSQLVAQLFQMRVRMKNLMG M+GGS+P+LSNLE
Sbjct: 474 EKPELLAESPQRRKRIAQASGKTEQQVSQLVAQLFQMRVRMKNLMGAMDGGSIPSLSNLE 533
Query: 361 DALKSEQK 368
DALK+EQK
Sbjct: 534 DALKTEQK 541
>gi|3746903|gb|AAC64109.1| signal recognition particle 54 kDa subunit precursor [Pisum
sativum]
Length = 525
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/402 (84%), Positives = 366/402 (91%), Gaps = 2/402 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEVSEL FA S PTVILLAGLQGVGKTTV AKLA Y KKQGKSCMLVAGDVYRPAAID
Sbjct: 121 MGGEVSELTFANSGPTVILLAGLQGVGKTTVCAKLATYFKKQGKSCMLVAGDVYRPAAID 180
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
L ILG+QV VPVY AGT+VKPS IAKQG EEAKKK +DVVIVDTAG LQIDKAMMDELK
Sbjct: 181 XLTILGKQVDVPVYAAGTDVKPSVIAKQGFEEAKKKKIDVVIVDTAGSLQIDKAMMDELK 240
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+VK+VLNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVS
Sbjct: 241 EVKQVLNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVS 300
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVM +EDAE+MQKKIMSA
Sbjct: 301 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMLEEDAEDMQKKIMSA 360
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFND LKQTRTVA+MGS+SRV+GMIPGM K+TPAQ+REAEK+L+ ME +IEAMTPEER
Sbjct: 361 KFDFNDLLKQTRTVAKMGSVSRVLGMIPGMAKVTPAQIREAEKNLQFMEVIIEAMTPEER 420
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 360
KPELLAE PVRRK VAQ+SGKTEQQVSQLVAQLFQMRVRMK LMGVMEGGS+P LSNLE
Sbjct: 421 GKPELLAEFPVRRKSVAQESGKTEQQVSQLVAQLFQMRVRMKKLMGVMEGGSMPTLSNLE 480
Query: 361 DALKSEQKAPPGTARRKRRSESRRQFVDPAS--TRPSPRGFG 400
+ALK+ +KAPPGTARRK++ +R F +S + P+PRGFG
Sbjct: 481 EALKANKKAPPGTARRKKKGGLKRLFKGRSSKISLPAPRGFG 522
>gi|148906612|gb|ABR16458.1| unknown [Picea sitchensis]
Length = 573
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 306/402 (76%), Positives = 356/402 (88%), Gaps = 2/402 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEV+EL FAK+ PTVIL+AGLQGVGKTT AKLA YLKK+GK+CMLVA DVYRPAAID
Sbjct: 171 MGGEVAELDFAKTGPTVILMAGLQGVGKTTACAKLALYLKKKGKNCMLVAADVYRPAAID 230
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLVILG+QV VPVY AGT+V P +IAKQGLEEAKKK++DVVIVDTAGRLQ+DK+MMDELK
Sbjct: 231 QLVILGKQVEVPVYEAGTKVTPMEIAKQGLEEAKKKDMDVVIVDTAGRLQVDKSMMDELK 290
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
VK+ +NPTEVLLVVDAMTGQEAAALV FN+EIGITGAILTKLDGDSRGGAALSV+EVS
Sbjct: 291 QVKQAMNPTEVLLVVDAMTGQEAAALVAAFNLEIGITGAILTKLDGDSRGGAALSVREVS 350
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG+GERMEDLEPFYPDRMA RILGMGDVLSFVEKAQ+VM++E+AEE+QKKIM +
Sbjct: 351 GKPIKFVGQGERMEDLEPFYPDRMASRILGMGDVLSFVEKAQQVMKEEEAEELQKKIMES 410
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQTR +ARMGSM+RVIGMIPGMGK++ AQ+R+AEKSL+I+E+MI AMT EER
Sbjct: 411 KFDFNDFLKQTRVIARMGSMNRVIGMIPGMGKVSSAQIRDAEKSLRIVESMINAMTEEER 470
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 360
PELLA+SP RR+++A DSG++EQQVSQL+AQLFQMR MKN+MG M+GG+ P + NLE
Sbjct: 471 ANPELLAQSPARRRKIAVDSGRSEQQVSQLIAQLFQMRAGMKNMMGAMQGGT-PGIDNLE 529
Query: 361 DALKSEQKAPPGTA-RRKRRSESRRQFVDPASTRPSPRGFGG 401
+ALK QK PPG A RRK R+ ++Q + AS + +PRGFG
Sbjct: 530 EALKVSQKVPPGMAKRRKNRTNLKKQLTNTASLQDTPRGFGA 571
>gi|222615533|gb|EEE51665.1| hypothetical protein OsJ_33001 [Oryza sativa Japonica Group]
Length = 550
Score = 619 bits (1595), Expect = e-174, Method: Compositional matrix adjust.
Identities = 307/386 (79%), Positives = 344/386 (89%), Gaps = 1/386 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEVS+LVFAKS PTVILLAGLQGVGKTTV AKLA YLKK GKSCMLVA DVYRPAAID
Sbjct: 156 MGGEVSDLVFAKSGPTVILLAGLQGVGKTTVCAKLAFYLKKLGKSCMLVAADVYRPAAID 215
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ILGEQVGVPVY+ GTE KP+QI K +EEAK+KN+D +++DTAGRLQIDK+MM ELK
Sbjct: 216 QLTILGEQVGVPVYSEGTEAKPAQITKNAVEEAKRKNIDAIVMDTAGRLQIDKSMMVELK 275
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+VK+ +NPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS
Sbjct: 276 EVKKAVNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 335
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VGRGERMEDLE FYPDRMA R+LGMGDVLSFVEKAQEVM+QEDA E+QKKIMSA
Sbjct: 336 GKPIKFVGRGERMEDLELFYPDRMAQRVLGMGDVLSFVEKAQEVMRQEDAVELQKKIMSA 395
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ++ VA+MGSMSRV+GMIPGM K+TPAQ+REAEK L +E+MI AMT EER
Sbjct: 396 KFDFNDFLKQSQNVAKMGSMSRVVGMIPGMNKVTPAQIREAEKRLAFVESMINAMTAEER 455
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG-SLPALSNL 359
EKPELLAES RR RVA++SGK+EQ+VSQLVAQLFQMR +M+ LMGVM G +LP + NL
Sbjct: 456 EKPELLAESRDRRIRVAEESGKSEQEVSQLVAQLFQMRAQMQKLMGVMTGQEALPGMGNL 515
Query: 360 EDALKSEQKAPPGTARRKRRSESRRQ 385
++L +++KAPPGTARRKRR RQ
Sbjct: 516 MESLNADEKAPPGTARRKRRHSKTRQ 541
>gi|218185264|gb|EEC67691.1| hypothetical protein OsI_35150 [Oryza sativa Indica Group]
Length = 550
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 305/386 (79%), Positives = 342/386 (88%), Gaps = 1/386 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEVS+LVFAKS PTVILLAGLQGVGKTTV AKLA YLKK GKSCMLVA DVYRPAAID
Sbjct: 156 MGGEVSDLVFAKSGPTVILLAGLQGVGKTTVCAKLAFYLKKLGKSCMLVAADVYRPAAID 215
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ILGEQVGVPVY+ TE KP+QI K +EEAK+KN+D +++DTAGRLQIDK+MM ELK
Sbjct: 216 QLTILGEQVGVPVYSERTEAKPAQITKNAVEEAKRKNIDAIVMDTAGRLQIDKSMMVELK 275
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+VK+ +NPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS
Sbjct: 276 EVKKAVNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 335
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VGRGERMEDLE FYPDRMA R+LGMGDVLSFVEKAQEVM+QEDA E+QKKIMSA
Sbjct: 336 GKPIKFVGRGERMEDLELFYPDRMAQRVLGMGDVLSFVEKAQEVMRQEDAVELQKKIMSA 395
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ++ VA+MGSMSRV+GMIPGM K+TPAQ+REAEK L +E+MI AMT EER
Sbjct: 396 KFDFNDFLKQSQNVAKMGSMSRVVGMIPGMNKVTPAQIREAEKRLAFVESMINAMTAEER 455
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG-SLPALSNL 359
EKPELLAES RR RVA++SGK+E +VSQLVAQLFQMR +M+ LMGVM G +LP + NL
Sbjct: 456 EKPELLAESRDRRIRVAEESGKSEHEVSQLVAQLFQMRAQMQKLMGVMTGQEALPGMGNL 515
Query: 360 EDALKSEQKAPPGTARRKRRSESRRQ 385
++L +++KAPPGTARRKRR RQ
Sbjct: 516 MESLNADEKAPPGTARRKRRHSKTRQ 541
>gi|413924903|gb|AFW64835.1| hypothetical protein ZEAMMB73_999058 [Zea mays]
Length = 486
Score = 613 bits (1580), Expect = e-173, Method: Compositional matrix adjust.
Identities = 300/386 (77%), Positives = 346/386 (89%), Gaps = 1/386 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEVS++VFAKS PTVILLAGLQGVGKTTV AKLA YLKK GKSCMLVA D+YRPAAID
Sbjct: 93 MGGEVSDIVFAKSGPTVILLAGLQGVGKTTVCAKLAFYLKKLGKSCMLVAADIYRPAAID 152
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ILG+QVGVPVY+ GTE KP+QI K +EEAK KN+D ++VDTAGRLQID++MMDELK
Sbjct: 153 QLTILGKQVGVPVYSEGTEAKPTQITKNAMEEAKSKNIDAIVVDTAGRLQIDRSMMDELK 212
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+VK+ +NPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS
Sbjct: 213 EVKKAVNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 272
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VGRGER+EDLE FYPDRMA R+LGMGDVLSFVEK QEVM+QE+A E+QKKIMSA
Sbjct: 273 GRPIKFVGRGERLEDLELFYPDRMAQRVLGMGDVLSFVEKTQEVMRQEEAIELQKKIMSA 332
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ++ VA+MGSMSR+IGM+PGM KITPAQ+REAEK L +E+MI AMT EER
Sbjct: 333 KFDFNDFLKQSQNVAKMGSMSRIIGMMPGMNKITPAQIREAEKRLAFVESMINAMTAEER 392
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG-SLPALSNL 359
EKPELLAES RR RVA++SGKTEQ+VSQLVAQLFQMR +M+ LMG+++G ++ + +L
Sbjct: 393 EKPELLAESRERRIRVAEESGKTEQEVSQLVAQLFQMRAQMQKLMGMVQGQEAIAGMGDL 452
Query: 360 EDALKSEQKAPPGTARRKRRSESRRQ 385
D+LKSE+KAPPGTARRKRR+ + +Q
Sbjct: 453 MDSLKSEEKAPPGTARRKRRNNTSKQ 478
>gi|413924904|gb|AFW64836.1| hypothetical protein ZEAMMB73_999058 [Zea mays]
Length = 545
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 300/386 (77%), Positives = 346/386 (89%), Gaps = 1/386 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEVS++VFAKS PTVILLAGLQGVGKTTV AKLA YLKK GKSCMLVA D+YRPAAID
Sbjct: 152 MGGEVSDIVFAKSGPTVILLAGLQGVGKTTVCAKLAFYLKKLGKSCMLVAADIYRPAAID 211
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ILG+QVGVPVY+ GTE KP+QI K +EEAK KN+D ++VDTAGRLQID++MMDELK
Sbjct: 212 QLTILGKQVGVPVYSEGTEAKPTQITKNAMEEAKSKNIDAIVVDTAGRLQIDRSMMDELK 271
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+VK+ +NPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS
Sbjct: 272 EVKKAVNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 331
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VGRGER+EDLE FYPDRMA R+LGMGDVLSFVEK QEVM+QE+A E+QKKIMSA
Sbjct: 332 GRPIKFVGRGERLEDLELFYPDRMAQRVLGMGDVLSFVEKTQEVMRQEEAIELQKKIMSA 391
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ++ VA+MGSMSR+IGM+PGM KITPAQ+REAEK L +E+MI AMT EER
Sbjct: 392 KFDFNDFLKQSQNVAKMGSMSRIIGMMPGMNKITPAQIREAEKRLAFVESMINAMTAEER 451
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG-SLPALSNL 359
EKPELLAES RR RVA++SGKTEQ+VSQLVAQLFQMR +M+ LMG+++G ++ + +L
Sbjct: 452 EKPELLAESRERRIRVAEESGKTEQEVSQLVAQLFQMRAQMQKLMGMVQGQEAIAGMGDL 511
Query: 360 EDALKSEQKAPPGTARRKRRSESRRQ 385
D+LKSE+KAPPGTARRKRR+ + +Q
Sbjct: 512 MDSLKSEEKAPPGTARRKRRNNTSKQ 537
>gi|115484239|ref|NP_001065781.1| Os11g0153700 [Oryza sativa Japonica Group]
gi|62701662|gb|AAX92735.1| signal recognition particle protein, putative [Oryza sativa
Japonica Group]
gi|108864005|gb|ABG22368.1| Signal recognition particle 54 kDa protein, chloroplast precursor,
putative, expressed [Oryza sativa Japonica Group]
gi|113644485|dbj|BAF27626.1| Os11g0153700 [Oryza sativa Japonica Group]
gi|215765043|dbj|BAG86740.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222615534|gb|EEE51666.1| hypothetical protein OsJ_33002 [Oryza sativa Japonica Group]
Length = 557
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 297/389 (76%), Positives = 345/389 (88%), Gaps = 1/389 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEVS+LVFAK+ PTVILLAGLQGVGKTTV AKLA YLKK GKSCML+A DVYRPAAID
Sbjct: 161 MGGEVSDLVFAKTAPTVILLAGLQGVGKTTVCAKLAYYLKKMGKSCMLIAADVYRPAAID 220
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ILG+QVGVPVY+ GTE KPSQIAK G++EAK K DV+IVDTAGRLQ+DKAMM ELK
Sbjct: 221 QLTILGKQVGVPVYSEGTEAKPSQIAKNGIKEAKSKKTDVIIVDTAGRLQVDKAMMSELK 280
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+VKR +NPTEVLLVVDAMTGQEAA+LV+TFN+EIGITGAILTKLDGDSRGGAALS+KEVS
Sbjct: 281 EVKRAVNPTEVLLVVDAMTGQEAASLVSTFNVEIGITGAILTKLDGDSRGGAALSIKEVS 340
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VGRGERMEDLEPFYPDRMA RILGMGDVLSFVEKAQEVM+QEDAEE+QKKI+SA
Sbjct: 341 GKPIKFVGRGERMEDLEPFYPDRMAQRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSA 400
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F+FNDFLKQT+ +A+MGS SR+IGMIPGM K+TPAQ+REAEK+LK ME+MI MTPEER
Sbjct: 401 KFNFNDFLKQTQAIAQMGSFSRIIGMIPGMNKVTPAQIREAEKNLKFMESMINVMTPEER 460
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 360
E+PELLAES RR RVA++SGK E+QVSQLVAQLF+MR +M+ +MG M+G P + L
Sbjct: 461 ERPELLAESRERRIRVAKESGKNERQVSQLVAQLFRMRAQMQKMMGAMQGQDTPDMEGLM 520
Query: 361 DALKSEQKAPPGTARRKRRSES-RRQFVD 388
D++K+E++A GT +R+R+ + RR+ +D
Sbjct: 521 DSIKAEEQAAAGTGKRRRKYGNLRRRDLD 549
>gi|108864006|gb|ABG22369.1| Signal recognition particle 54 kDa protein, chloroplast precursor,
putative, expressed [Oryza sativa Japonica Group]
Length = 482
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 300/400 (75%), Positives = 349/400 (87%), Gaps = 7/400 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEVS+LVFAK+ PTVILLAGLQGVGKTTV AKLA YLKK GKSCML+A DVYRPAAID
Sbjct: 86 MGGEVSDLVFAKTAPTVILLAGLQGVGKTTVCAKLAYYLKKMGKSCMLIAADVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ILG+QVGVPVY+ GTE KPSQIAK G++EAK K DV+IVDTAGRLQ+DKAMM ELK
Sbjct: 146 QLTILGKQVGVPVYSEGTEAKPSQIAKNGIKEAKSKKTDVIIVDTAGRLQVDKAMMSELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+VKR +NPTEVLLVVDAMTGQEAA+LV+TFN+EIGITGAILTKLDGDSRGGAALS+KEVS
Sbjct: 206 EVKRAVNPTEVLLVVDAMTGQEAASLVSTFNVEIGITGAILTKLDGDSRGGAALSIKEVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VGRGERMEDLEPFYPDRMA RILGMGDVLSFVEKAQEVM+QEDAEE+QKKI+SA
Sbjct: 266 GKPIKFVGRGERMEDLEPFYPDRMAQRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F+FNDFLKQT+ +A+MGS SR+IGMIPGM K+TPAQ+REAEK+LK ME+MI MTPEER
Sbjct: 326 KFNFNDFLKQTQAIAQMGSFSRIIGMIPGMNKVTPAQIREAEKNLKFMESMINVMTPEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 360
E+PELLAES RR RVA++SGK E+QVSQLVAQLF+MR +M+ +MG M+G P + L
Sbjct: 386 ERPELLAESRERRIRVAKESGKNERQVSQLVAQLFRMRAQMQKMMGAMQGQDTPDMEGLM 445
Query: 361 DALKSEQKAPPGTARRKRRSES-RRQFVDPASTRPSPRGF 399
D++K+E++A GT +R+R+ + RR+ +D + RGF
Sbjct: 446 DSIKAEEQAAAGTGKRRRKYGNLRRRDLD------AMRGF 479
>gi|218185265|gb|EEC67692.1| hypothetical protein OsI_35151 [Oryza sativa Indica Group]
Length = 557
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 297/389 (76%), Positives = 345/389 (88%), Gaps = 1/389 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEVS+LVFAK+ PTVILLAGLQGVGKTTV AKLA YLKK GKSCML+A DVYRPAAID
Sbjct: 161 MGGEVSDLVFAKTAPTVILLAGLQGVGKTTVCAKLAYYLKKMGKSCMLIAADVYRPAAID 220
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ILG+QVGVPVY+ GTE KPSQIAK G++EAK K DV+IVDTAGRLQ+DKAMM ELK
Sbjct: 221 QLTILGKQVGVPVYSEGTEAKPSQIAKNGIKEAKSKKTDVIIVDTAGRLQVDKAMMSELK 280
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+VKR +NPTEVLLVVDAMTGQEAA+LV+TFN+EIGITGAILTKLDGDSRGGAALS+KEVS
Sbjct: 281 EVKRAVNPTEVLLVVDAMTGQEAASLVSTFNVEIGITGAILTKLDGDSRGGAALSIKEVS 340
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VGRGERMEDLEPFYPDRMA RILGMGDVLSFVEKAQEVM+QEDAEE+QKKI+SA
Sbjct: 341 GKPIKFVGRGERMEDLEPFYPDRMAQRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSA 400
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F+FNDFLKQT+ +A+MGS SR+IGMIPGM K+TPAQ+REAEK+LK ME+MI MTPEER
Sbjct: 401 KFNFNDFLKQTQAIAQMGSFSRIIGMIPGMNKVTPAQIREAEKNLKFMESMINVMTPEER 460
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 360
E+PELLAES RR RVA++SGK E+QVSQLVAQLF+MR +M+ +MG M+G P + L
Sbjct: 461 ERPELLAESRERRIRVAKESGKNERQVSQLVAQLFRMRAQMQKMMGAMQGQDTPDMEGLM 520
Query: 361 DALKSEQKAPPGTARRKRRSES-RRQFVD 388
D++K+E++A GT +R+R+ + RR+ +D
Sbjct: 521 DSIKAEEQAAAGTGKRRRKYGNLRRRDLD 549
>gi|242084798|ref|XP_002442824.1| hypothetical protein SORBIDRAFT_08g003410 [Sorghum bicolor]
gi|241943517|gb|EES16662.1| hypothetical protein SORBIDRAFT_08g003410 [Sorghum bicolor]
Length = 559
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 295/385 (76%), Positives = 341/385 (88%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEVS+LVFAKS PT+ILLAGLQGVGKTTV AKLA YLKK GKSCMLVA DVYRPAAID
Sbjct: 163 MGGEVSDLVFAKSGPTIILLAGLQGVGKTTVCAKLAFYLKKMGKSCMLVAADVYRPAAID 222
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ILG++VGVPVY+ GTE KPSQIAK GL+EAK DV+IVDTAGRLQ+DK+MM+ELK
Sbjct: 223 QLTILGKKVGVPVYSEGTEAKPSQIAKNGLKEAKVNKADVIIVDTAGRLQVDKSMMNELK 282
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+VK+ +NPTEVLLVVDAMTGQEAA LV++FN EIGITGAILTKLDGDSRGGAALSVKEVS
Sbjct: 283 EVKKAVNPTEVLLVVDAMTGQEAAGLVSSFNDEIGITGAILTKLDGDSRGGAALSVKEVS 342
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG+GER+EDLEPFYPDRMA RILGMGDVLSFVEKAQEVM+QEDAEE+QKKI+SA
Sbjct: 343 GKPIKFVGQGERIEDLEPFYPDRMAQRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSA 402
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F+FNDFLKQT+ +A+MGS SR+IGMIPGM K+TPAQ+REAEK+LK ME+MI MTPEER
Sbjct: 403 KFNFNDFLKQTQMIAQMGSFSRLIGMIPGMNKVTPAQIREAEKNLKFMESMINVMTPEER 462
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 360
E+PELLAES RRKRVA+DSGKTEQQV QLVAQLFQMR +M+ +MG ++G P + L
Sbjct: 463 ERPELLAESRERRKRVAKDSGKTEQQVGQLVAQLFQMRAKMQKMMGAIQGKESPDMDELM 522
Query: 361 DALKSEQKAPPGTARRKRRSESRRQ 385
+++K+E++A GT RR+R+ + RQ
Sbjct: 523 ESMKAEEQAAAGTGRRRRKYGNLRQ 547
>gi|226501792|ref|NP_001142003.1| uncharacterized protein LOC100274153 [Zea mays]
gi|194706754|gb|ACF87461.1| unknown [Zea mays]
gi|413916134|gb|AFW56066.1| hypothetical protein ZEAMMB73_792527 [Zea mays]
Length = 556
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 295/385 (76%), Positives = 340/385 (88%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEVS+LVFAKS PT+ILLAGLQGVGKTTV AKLA YLKK GKSCMLVA DVYRPAAID
Sbjct: 160 MGGEVSDLVFAKSGPTIILLAGLQGVGKTTVCAKLAFYLKKLGKSCMLVAADVYRPAAID 219
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ILG++VGVPVY+ GTE KPSQIAK GL+EAK DV+IVDTAGRLQ+DKAMM+ELK
Sbjct: 220 QLTILGKKVGVPVYSEGTEAKPSQIAKNGLKEAKVNKADVIIVDTAGRLQVDKAMMNELK 279
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+VK+ +NPTEVLLVVDAMTGQEAA LV++FN EIGITGAILTKLDGDSRGGAALSVKEVS
Sbjct: 280 EVKKAVNPTEVLLVVDAMTGQEAAGLVSSFNDEIGITGAILTKLDGDSRGGAALSVKEVS 339
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG+GER+EDLEPFYPDRMA RILGMGDVLSFVEKAQEVM+QEDA+E+QKKI+SA
Sbjct: 340 GKPIKFVGQGERIEDLEPFYPDRMAQRILGMGDVLSFVEKAQEVMRQEDADELQKKILSA 399
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F+FNDFLKQT+ +A+MGS SR+IGMIPGM K+TPAQ+REAEK+LK ME+MI MT EER
Sbjct: 400 KFNFNDFLKQTQMIAKMGSFSRLIGMIPGMNKVTPAQIREAEKNLKFMESMINVMTLEER 459
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 360
E+PELLAES RRKRVA+DSGKTEQQVSQLVAQLFQMR +M+ +MG M+G P + L
Sbjct: 460 ERPELLAESRERRKRVAKDSGKTEQQVSQLVAQLFQMRAKMQKMMGAMQGKESPDMDELM 519
Query: 361 DALKSEQKAPPGTARRKRRSESRRQ 385
++K+E+++ GT RR+R+ + RQ
Sbjct: 520 GSMKAEEQSAAGTGRRRRKYGNLRQ 544
>gi|357157550|ref|XP_003577835.1| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Brachypodium distachyon]
Length = 548
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 286/389 (73%), Positives = 341/389 (87%), Gaps = 1/389 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG+VSELVFAKS PTVILLAGLQGVGKTTV AKLA YLKK GKSCMLVA DVYRPAAID
Sbjct: 153 MGGDVSELVFAKSGPTVILLAGLQGVGKTTVCAKLAFYLKKMGKSCMLVAADVYRPAAID 212
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ILG++VGVPVY+ GT+ KPS IAK GL+EAK K DV+IVDTAGRLQ+DKAMM+ELK
Sbjct: 213 QLTILGKKVGVPVYSEGTDAKPSDIAKNGLKEAKSKKTDVIIVDTAGRLQVDKAMMNELK 272
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+VK+ + PTEVLLVVDAMTGQEAA+LV FN E+GITGAILTKLDGDSRGGAALS+KEVS
Sbjct: 273 EVKKAVKPTEVLLVVDAMTGQEAASLVGAFNGEVGITGAILTKLDGDSRGGAALSIKEVS 332
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VGRGER+EDLEPFYPDRMA RILGMGDVLSFVE+AQ+VM+QE+AEE+Q KIMSA
Sbjct: 333 GKPIKFVGRGERVEDLEPFYPDRMAQRILGMGDVLSFVEQAQQVMRQEEAEELQNKIMSA 392
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F+FNDFLKQT+ +++MGS SR+IGMIPGM K+TPAQ+REAEK++K ME+MI M+ +ER
Sbjct: 393 KFNFNDFLKQTKAISQMGSFSRIIGMIPGMNKVTPAQIREAEKNVKFMESMINVMSADER 452
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 360
E+PELLA S RR+RVA+DSGKTEQQVSQLV+QLF+MR RM+ +MG M+G P + NL
Sbjct: 453 ERPELLAGSRERRRRVAKDSGKTEQQVSQLVSQLFKMRARMQKMMGAMQGKDTPDMDNLM 512
Query: 361 DALKSEQKAPPGTARRKRRSES-RRQFVD 388
+++K+E++A GT +R+R+ + RR+ +D
Sbjct: 513 ESIKAEEQAATGTGQRRRKYGNLRRRDLD 541
>gi|326487934|dbj|BAJ89806.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326495310|dbj|BAJ85751.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 554
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 286/370 (77%), Positives = 327/370 (88%), Gaps = 1/370 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEVS+LVFAK+ PTVILLAGLQGVGKTTV AKLA YLKK GKSCMLVA DVYRPAAID
Sbjct: 156 MGGEVSDLVFAKTGPTVILLAGLQGVGKTTVCAKLAFYLKKLGKSCMLVAADVYRPAAID 215
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQVGVPVY+ GT KP++I K +EEAK+ N+D ++VDTAGRLQIDK MM ELK
Sbjct: 216 QLTVLGEQVGVPVYSEGTTAKPAEITKNAMEEAKRNNIDAIVVDTAGRLQIDKTMMVELK 275
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+VK+ +NPTE+LLVVDAMTGQEAAALVTTFNIEIGI+GAILTKLDGDSRGGAALSVKEVS
Sbjct: 276 EVKKSVNPTEILLVVDAMTGQEAAALVTTFNIEIGISGAILTKLDGDSRGGAALSVKEVS 335
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VGRGERMEDLE FYPDRMA R+LGMGDVLSFVEKAQEV++QED E+QKKIMSA
Sbjct: 336 GKPIKFVGRGERMEDLELFYPDRMAQRVLGMGDVLSFVEKAQEVVRQEDTTELQKKIMSA 395
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQT+ VA+MGSMSRVIGMIPGM K+TPAQ+REAEK L +E+MI AMT EE+
Sbjct: 396 KFDFNDFLKQTQNVAKMGSMSRVIGMIPGMNKVTPAQIREAEKRLAFVESMINAMTAEEK 455
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG-SLPALSNL 359
EKPELLAES RR RVA++S KTEQ+VSQLVAQLFQMR +MK LMG+M+G ++ + +L
Sbjct: 456 EKPELLAESRERRIRVAEESEKTEQEVSQLVAQLFQMRAQMKKLMGMMQGQEAIAGMGDL 515
Query: 360 EDALKSEQKA 369
D+L +++KA
Sbjct: 516 MDSLNADEKA 525
>gi|357153012|ref|XP_003576310.1| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Brachypodium distachyon]
Length = 554
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 287/370 (77%), Positives = 327/370 (88%), Gaps = 1/370 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEVS+LVFAK+ PTVILLAGLQGVGKTTV AKLA YLKK GKSCMLVA DVYRPAAID
Sbjct: 156 MGGEVSDLVFAKTGPTVILLAGLQGVGKTTVCAKLAFYLKKLGKSCMLVAADVYRPAAID 215
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQVGVPVY+ GT KP+QI K +EEAK+K +D ++VDTAGRLQIDK MMDELK
Sbjct: 216 QLTVLGEQVGVPVYSEGTGAKPAQITKNAVEEAKRKKIDAIVVDTAGRLQIDKTMMDELK 275
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+VK+ +NPTE+LLVVDAMTGQEAAALVTTFNIEIGI+GAILTKLDGDSRGGAALSVKEVS
Sbjct: 276 EVKKAVNPTEILLVVDAMTGQEAAALVTTFNIEIGISGAILTKLDGDSRGGAALSVKEVS 335
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VGRGERMEDLE FYPDRMA R+LGMGDVLSFVEKAQEV++QED E+QKKIMSA
Sbjct: 336 GKPIKFVGRGERMEDLELFYPDRMAQRVLGMGDVLSFVEKAQEVVRQEDTIELQKKIMSA 395
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQT+ VA+MGSMSRVIGMIPGM K+TPAQ+REAEK L +E+MI AMT EER
Sbjct: 396 KFDFNDFLKQTQNVAKMGSMSRVIGMIPGMNKVTPAQIREAEKRLAFVESMINAMTAEER 455
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG-SLPALSNL 359
EKPELLAES RR RVA++S KTEQ+V QLVAQLFQMR +M+ LMG+M+G ++ + +L
Sbjct: 456 EKPELLAESRERRIRVAEESEKTEQEVGQLVAQLFQMRAQMQKLMGMMQGQEAITGMGDL 515
Query: 360 EDALKSEQKA 369
D+L +++KA
Sbjct: 516 MDSLNADEKA 525
>gi|242070027|ref|XP_002450290.1| hypothetical protein SORBIDRAFT_05g003290 [Sorghum bicolor]
gi|241936133|gb|EES09278.1| hypothetical protein SORBIDRAFT_05g003290 [Sorghum bicolor]
Length = 539
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 285/386 (73%), Positives = 330/386 (85%), Gaps = 13/386 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEVS+LVF+KS PTVILLA T +L QGKSCMLVA DVYRPAAID
Sbjct: 158 MGGEVSDLVFSKSGPTVILLA------DTYTRVRL------QGKSCMLVAADVYRPAAID 205
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ILG+QVGVPVY+ GTE KP+QI K +EEAK KN+D ++VDTAGRLQIDK+MMDELK
Sbjct: 206 QLTILGKQVGVPVYSEGTEAKPTQITKNAMEEAKSKNIDAIVVDTAGRLQIDKSMMDELK 265
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+VK+ +NPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS
Sbjct: 266 EVKKAVNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 325
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VGRGER+EDLE FYPDRMA R+LGMGDVLSFVEK QEVM+QE+A E+QKKIMSA
Sbjct: 326 GKPIKFVGRGERLEDLELFYPDRMAQRVLGMGDVLSFVEKTQEVMRQEEAVELQKKIMSA 385
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ++ VA+MGSMSR+IGM+PGM KITPAQ+REAEK L +E+MI AMT EER
Sbjct: 386 KFDFNDFLKQSQNVAKMGSMSRIIGMMPGMNKITPAQIREAEKRLAFVESMINAMTAEER 445
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG-GSLPALSNL 359
EKPELLAES RR RVA++SGKTEQ+VSQLVAQLFQMR +M+ LM +++G ++ + +L
Sbjct: 446 EKPELLAESRERRIRVAEESGKTEQEVSQLVAQLFQMRAQMQKLMSMVQGQDAIAGMGDL 505
Query: 360 EDALKSEQKAPPGTARRKRRSESRRQ 385
D+LK+E+KAPPGTARR+RR+ +Q
Sbjct: 506 MDSLKAEEKAPPGTARRRRRNSKPKQ 531
>gi|168001070|ref|XP_001753238.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695524|gb|EDQ81867.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 617
Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust.
Identities = 275/401 (68%), Positives = 332/401 (82%), Gaps = 1/401 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGE+ + FAKS PTVIL+AGLQGVGKTT KLA + KK+GKS M+VA DVYRPAAID
Sbjct: 211 MGGEMVGIEFAKSGPTVILMAGLQGVGKTTACGKLALFCKKKGKSVMMVATDVYRPAAID 270
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLV LG+QV VPV+ AG +++P++IAK+GL E KK+ +DV+IVDTAGRLQ+D+ MMDELK
Sbjct: 271 QLVTLGKQVEVPVFEAGNQLRPAEIAKRGLAEGKKQGIDVIIVDTAGRLQVDRGMMDELK 330
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K+V+NPTEVLLVVDAMTGQEAA LV +FN+EIGITGAILTKLDGDSRGGAALSVKEVS
Sbjct: 331 QIKQVVNPTEVLLVVDAMTGQEAAGLVASFNLEIGITGAILTKLDGDSRGGAALSVKEVS 390
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK VG GE M LEPFYPDRMA RILGMGDVL+FVEKAQEVM +EDAE MQK+IM A
Sbjct: 391 NKPIKFVGEGEGMTALEPFYPDRMASRILGMGDVLTFVEKAQEVMVKEDAELMQKRIMEA 450
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFL QTR +ARMGSMS ++ +PGM K++P Q+REAEKSLKIME+MI +MTP+ER
Sbjct: 451 KFDFNDFLAQTRNLARMGSMSNIMKFLPGMNKVSPQQIREAEKSLKIMESMINSMTPKER 510
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 360
P+LLA+SP RR+RVA SG++++QVS LVAQLFQMRVRMK+L +M+GGS+P + LE
Sbjct: 511 ADPDLLAKSPSRRRRVANGSGRSQEQVSALVAQLFQMRVRMKSLATMMQGGSIPGMEGLE 570
Query: 361 DALKSEQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFGG 401
+ +K +KA PGTA+RKR Q + + + SP+G GG
Sbjct: 571 EGMKGGRKAAPGTAKRKRSRGFASQLAE-SGAKSSPKGSGG 610
>gi|302761974|ref|XP_002964409.1| hypothetical protein SELMODRAFT_81276 [Selaginella moellendorffii]
gi|300168138|gb|EFJ34742.1| hypothetical protein SELMODRAFT_81276 [Selaginella moellendorffii]
Length = 494
Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/401 (68%), Positives = 330/401 (82%), Gaps = 2/401 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG+ + + F+ + PTVIL+AGLQGVGKTT KLA Y+KK+GKSCMLVA D+YRPAAI+
Sbjct: 92 MGGQAAHIEFSGTPPTVILMAGLQGVGKTTACGKLALYMKKKGKSCMLVATDIYRPAAIE 151
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+QV VPV+ AGTE+ P +IAK+GL+EAK+K DV+IVDTAGRLQ+D MMDELK
Sbjct: 152 QLITLGKQVEVPVFEAGTELSPVEIAKRGLKEAKEKGTDVLIVDTAGRLQVDATMMDELK 211
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K+VLNP EVLLVVDAMTGQEAAALV+ FN+E+GITGAI+TK+DGDSRGGAALSV+EVS
Sbjct: 212 QMKKVLNPNEVLLVVDAMTGQEAAALVSAFNLEVGITGAIMTKVDGDSRGGAALSVREVS 271
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GE M LE FYPDRMA RILGMGDVLSFVEKAQE M +EDAE+MQKKIM A
Sbjct: 272 GKPIKFVGEGEGMNALELFYPDRMASRILGMGDVLSFVEKAQESMVKEDAEDMQKKIMEA 331
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
+DFND+LKQ +ARMGSM V+ +IPGM K+TP Q+REAE+SL I EAMI AMTPEER
Sbjct: 332 KYDFNDYLKQLNALARMGSMGGVLKLIPGMNKVTPQQIREAERSLSIAEAMINAMTPEER 391
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 360
E PELLA+SPVRRKRVA +SG+TE QV QL++QL+QMR +MKNL M+ G +P L +LE
Sbjct: 392 EDPELLAKSPVRRKRVATESGRTEAQVGQLISQLYQMRAQMKNLAAKMQDGKMPGLEDLE 451
Query: 361 DALKSEQKAPPGTARRKR-RSESRRQFVDPASTRPSPRGFG 400
+ L K PPGTARRK+ +SE ++Q + + +P+GFG
Sbjct: 452 E-LSKGAKLPPGTARRKKGKSELQKQLSAIGNKQSAPKGFG 491
>gi|302768411|ref|XP_002967625.1| hypothetical protein SELMODRAFT_169303 [Selaginella moellendorffii]
gi|300164363|gb|EFJ30972.1| hypothetical protein SELMODRAFT_169303 [Selaginella moellendorffii]
Length = 462
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 273/401 (68%), Positives = 330/401 (82%), Gaps = 2/401 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG+ + + F+ + PTVIL+AGLQGVGKTT KLA Y+KK+GKSCMLVA D+YRPAAI+
Sbjct: 60 MGGQAAHIEFSGTPPTVILMAGLQGVGKTTACGKLALYMKKKGKSCMLVATDIYRPAAIE 119
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+QV VPV+ AGTE+ P +IAK+GL+EAK+K DV+IVDTAGRLQ+D MMDELK
Sbjct: 120 QLITLGKQVEVPVFEAGTELSPVEIAKRGLKEAKEKGTDVLIVDTAGRLQVDATMMDELK 179
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K+VLNP EVLLVVDAMTGQEAAALV+ FN+E+GITGAI+TK+DGDSRGGAALSV+EVS
Sbjct: 180 QMKKVLNPNEVLLVVDAMTGQEAAALVSAFNLEVGITGAIMTKVDGDSRGGAALSVQEVS 239
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GE M LE FYPDRMA RILGMGDVLSFVEKAQE M +EDAE+MQKKIM A
Sbjct: 240 GKPIKFVGEGEGMNALELFYPDRMASRILGMGDVLSFVEKAQESMMKEDAEDMQKKIMEA 299
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
+DFND+LKQ +ARMGSM V+ +IPGM K+TP Q+REAE+SL I EAMI AMTPEER
Sbjct: 300 KYDFNDYLKQLNALARMGSMGGVLKLIPGMNKVTPQQIREAERSLSIAEAMINAMTPEER 359
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 360
E PELLA+SPVRRKRVA +SG+TE QV QL++QL+QMR +MKNL M+ G +P L +LE
Sbjct: 360 EDPELLAKSPVRRKRVATESGRTEAQVGQLISQLYQMRAQMKNLAARMQDGKMPGLEDLE 419
Query: 361 DALKSEQKAPPGTARRKR-RSESRRQFVDPASTRPSPRGFG 400
+ L K PPGTARRK+ +SE ++Q + + +P+GFG
Sbjct: 420 E-LSKGAKLPPGTARRKKGKSELQKQLSAIGNKQSAPKGFG 459
>gi|62733121|gb|AAX95238.1| signal recognition particle protein, putative [Oryza sativa
Japonica Group]
Length = 1072
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 276/381 (72%), Positives = 313/381 (82%), Gaps = 32/381 (8%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEVS+LVFAKS PTVILLAGLQ DVYRPAAID
Sbjct: 173 MGGEVSDLVFAKSGPTVILLAGLQ---------------------------DVYRPAAID 205
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ILGEQVGVPVY+ GTE KP+QI K +EEAK+KN+D +++DTAGRLQIDK+MM ELK
Sbjct: 206 QLTILGEQVGVPVYSEGTEAKPAQITKNAVEEAKRKNIDAIVMDTAGRLQIDKSMMVELK 265
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+VK+ +NPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS
Sbjct: 266 EVKKAVNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 325
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VGRGERMEDLE FYPDRMA R+LGMGDVLSFVEKAQEVM+QEDA E+QKKIMSA
Sbjct: 326 GKPIKFVGRGERMEDLELFYPDRMAQRVLGMGDVLSFVEKAQEVMRQEDAVELQKKIMSA 385
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ++ VA+MGSMSRV+GMIPGM K+TPAQ+REAEK L +E+MI AMT EER
Sbjct: 386 KFDFNDFLKQSQNVAKMGSMSRVVGMIPGMNKVTPAQIREAEKRLAFVESMINAMTAEER 445
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG-SLPALSNL 359
EKPELLAES RR RVA++SGK+EQ+VSQLVAQLFQMR +M+ LMGVM G +LP + NL
Sbjct: 446 EKPELLAESRDRRIRVAEESGKSEQEVSQLVAQLFQMRAQMQKLMGVMTGQEALPGMGNL 505
Query: 360 EDALKSEQKAPPGTARRKRRS 380
++L +++K RRKR S
Sbjct: 506 MESLNADEKG----WRRKRGS 522
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 246/346 (71%), Positives = 283/346 (81%), Gaps = 30/346 (8%)
Query: 39 LKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNV 98
L+ QGKSCML+A DVYRPAAIDQL ILG+QVGVPVY+ GTE KPSQIAK G++EAK K
Sbjct: 608 LRLQGKSCMLIAADVYRPAAIDQLTILGKQVGVPVYSEGTEAKPSQIAKNGIKEAKSKKT 667
Query: 99 DVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAA-------------- 144
DV+IVDTAGRLQ+DKAMM ELK+VKR +NPTEVLLVVDAMTGQEAA
Sbjct: 668 DVIIVDTAGRLQVDKAMMSELKEVKRAVNPTEVLLVVDAMTGQEAAFALRLTRISFLIWP 727
Query: 145 ALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRM 204
ALV+TFN+EIGITGAILTKLDGDSRGGAALS+KEVSGKPIK VGRGERMEDLEPFYPDRM
Sbjct: 728 ALVSTFNVEIGITGAILTKLDGDSRGGAALSIKEVSGKPIKFVGRGERMEDLEPFYPDRM 787
Query: 205 AGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVI 264
A RILGMGDVLSFVEKAQEVM+QEDAEE+QKKI+SA F+FNDFLKQT+ +A+MGS SR+I
Sbjct: 788 AQRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFNFNDFLKQTQAIAQMGSFSRII 847
Query: 265 GMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTE 324
GMIPGM K+TPAQ+REAEK+LK ME+MI MTPEERE+PELLAES RR RVA++SGK E
Sbjct: 848 GMIPGMNKVTPAQIREAEKNLKFMESMINVMTPEERERPELLAESRERRIRVAKESGKNE 907
Query: 325 QQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAP 370
+Q +MG M+G P + L D++K+E++AP
Sbjct: 908 RQ----------------KMMGAMQGQDTPDMEGLMDSIKAEEQAP 937
>gi|238009706|gb|ACR35888.1| unknown [Zea mays]
gi|413916133|gb|AFW56065.1| hypothetical protein ZEAMMB73_792527 [Zea mays]
Length = 351
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 255/339 (75%), Positives = 298/339 (87%)
Query: 47 MLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTA 106
MLVA DVYRPAAIDQL ILG++VGVPVY+ GTE KPSQIAK GL+EAK DV+IVDTA
Sbjct: 1 MLVAADVYRPAAIDQLTILGKKVGVPVYSEGTEAKPSQIAKNGLKEAKVNKADVIIVDTA 60
Query: 107 GRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDG 166
GRLQ+DKAMM+ELK+VK+ +NPTEVLLVVDAMTGQEAA LV++FN EIGITGAILTKLDG
Sbjct: 61 GRLQVDKAMMNELKEVKKAVNPTEVLLVVDAMTGQEAAGLVSSFNDEIGITGAILTKLDG 120
Query: 167 DSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQ 226
DSRGGAALSVKEVSGKPIK VG+GER+EDLEPFYPDRMA RILGMGDVLSFVEKAQEVM+
Sbjct: 121 DSRGGAALSVKEVSGKPIKFVGQGERIEDLEPFYPDRMAQRILGMGDVLSFVEKAQEVMR 180
Query: 227 QEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLK 286
QEDA+E+QKKI+SA F+FNDFLKQT+ +A+MGS SR+IGMIPGM K+TPAQ+REAEK+LK
Sbjct: 181 QEDADELQKKILSAKFNFNDFLKQTQMIAKMGSFSRLIGMIPGMNKVTPAQIREAEKNLK 240
Query: 287 IMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
ME+MI MT EERE+PELLAES RRKRVA+DSGKTEQQVSQLVAQLFQMR +M+ +MG
Sbjct: 241 FMESMINVMTLEERERPELLAESRERRKRVAKDSGKTEQQVSQLVAQLFQMRAKMQKMMG 300
Query: 347 VMEGGSLPALSNLEDALKSEQKAPPGTARRKRRSESRRQ 385
M+G P + L ++K+E+++ GT RR+R+ + RQ
Sbjct: 301 AMQGKESPDMDELMGSMKAEEQSAAGTGRRRRKYGNLRQ 339
>gi|443656730|ref|ZP_21131781.1| signal recognition particle protein [Microcystis aeruginosa
DIANCHI905]
gi|159027605|emb|CAO86977.1| ffh [Microcystis aeruginosa PCC 7806]
gi|443333355|gb|ELS47919.1| signal recognition particle protein [Microcystis aeruginosa
DIANCHI905]
Length = 478
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/344 (60%), Positives = 265/344 (77%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A PTVIL+AGLQG GKTT +AKLA YL+KQ KSC++VA DVYRPAAID
Sbjct: 86 MGESNVPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G++ P IA+QG+E+AK+ VD VI+DTAGRLQID MM EL
Sbjct: 146 QLITLGQQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K+++NP + LLVVDAMTGQEAA+L TF+ +IGITGAILTKLDGD+RGGAALSV+++S
Sbjct: 206 QIKKIVNPDDTLLVVDAMTGQEAASLTNTFHQQIGITGAILTKLDGDTRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ KI+ A
Sbjct: 266 GQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQAKILEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +MT EER
Sbjct: 326 KFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINSMTTEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P+LLA+SP RR+R+A+ SG E +V++L+A +MR M+ +
Sbjct: 386 ANPDLLAKSPNRRRRIAKGSGHPETEVTKLIANFTRMRTMMQQM 429
>gi|425447198|ref|ZP_18827189.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9443]
gi|389732320|emb|CCI03740.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9443]
Length = 478
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/344 (60%), Positives = 265/344 (77%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A PTVIL+AGLQG GKTT +AKLA YL+KQ KSC++VA DVYRPAAID
Sbjct: 86 MGESNVPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G++ P IA+QG+E+AK+ VD VI+DTAGRLQID MM EL
Sbjct: 146 QLITLGKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K+++NP + LLVVDAMTGQEAA+L TF+ +IGITGAILTKLDGD+RGGAALSV+++S
Sbjct: 206 QIKKIVNPDDTLLVVDAMTGQEAASLTNTFHQQIGITGAILTKLDGDTRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ KI+ A
Sbjct: 266 GQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQAKILEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +MT EER
Sbjct: 326 KFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINSMTTEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P+LLA+SP RR+R+A+ SG E +V++L+A +MR M+ +
Sbjct: 386 ANPDLLAKSPNRRRRIAKGSGHPETEVTKLIANFTRMRTMMQQM 429
>gi|440756742|ref|ZP_20935942.1| signal recognition particle protein [Microcystis aeruginosa
TAIHU98]
gi|440172771|gb|ELP52255.1| signal recognition particle protein [Microcystis aeruginosa
TAIHU98]
Length = 478
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/344 (60%), Positives = 264/344 (76%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A PTVIL+AGLQG GKTT +AKLA YL+KQ KSC++VA DVYRPAAID
Sbjct: 86 MGESNVPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G++ P IA+QG+E+AK+ VD VI+DTAGRLQID MM EL
Sbjct: 146 QLITLGKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K+++NP + LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGD+RGGAALSV+++S
Sbjct: 206 QIKKIVNPDDTLLVVDAMTGQEAANLTHTFHQQIGITGAILTKLDGDTRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ KI+ A
Sbjct: 266 GQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQAKILEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +MT EER
Sbjct: 326 KFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINSMTTEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P+LLA+SP RR+R+A+ SG E +VS+L+A +MR M+ +
Sbjct: 386 ANPDLLAKSPNRRRRIAKGSGHPETEVSKLIANFTRMRTMMQQM 429
>gi|425437780|ref|ZP_18818194.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9432]
gi|425462607|ref|ZP_18842080.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9808]
gi|389677199|emb|CCH93837.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9432]
gi|389824313|emb|CCI26812.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9808]
Length = 478
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/344 (60%), Positives = 264/344 (76%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A PTVIL+AGLQG GKTT +AKLA YL+KQ KSC++VA DVYRPAAID
Sbjct: 86 MGESNVPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G++ P IA+QG+E+AK+ VD VI+DTAGRLQID MM EL
Sbjct: 146 QLITLGKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K+++NP + LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGD+RGGAALSV+++S
Sbjct: 206 QIKKIVNPDDTLLVVDAMTGQEAANLTHTFHQQIGITGAILTKLDGDTRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ KI+ A
Sbjct: 266 GQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQAKILEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +MT EER
Sbjct: 326 KFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINSMTTEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P+LLA+SP RR+R+A+ SG E +VS+L+A +MR M+ +
Sbjct: 386 ANPDLLAKSPNRRRRIAKGSGHPETEVSKLIANFTRMRTMMQQM 429
>gi|332705584|ref|ZP_08425660.1| signal recognition particle subunit FFH/SRP54 [Moorea producens 3L]
gi|332355376|gb|EGJ34840.1| signal recognition particle subunit FFH/SRP54 [Moorea producens 3L]
Length = 479
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/355 (59%), Positives = 270/355 (76%), Gaps = 4/355 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A + PTV+L+AGLQG GKTT SAKLA +L+KQ +SC+LVA DVYRPAAID
Sbjct: 86 MGETNVPLAQADTPPTVVLMAGLQGTGKTTASAKLALHLRKQERSCLLVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLV LG+Q+ VPV+ GTE P +IA+QG+E AK +D VI+DTAGRLQID+ MM EL
Sbjct: 146 QLVTLGQQIDVPVFELGTEADPVEIARQGVERAKAMAIDTVIIDTAGRLQIDQEMMGELS 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P + LLVVDAMTGQEAA L TF+ +IGITGAIL+KLDGDSRGGAALSV+++S
Sbjct: 206 RIKETVQPHDTLLVVDAMTGQEAATLTRTFHEQIGITGAILSKLDGDSRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ+K++ A
Sbjct: 266 GQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDIADAEQMQQKMLEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF+DFLKQ R + MGS+ ++ ++PGMGK++ +Q+++ E LK EAMI +MT EER
Sbjct: 326 KFDFSDFLKQMRLLKNMGSLGGLMKLVPGMGKLSSSQLQQGETKLKQSEAMISSMTSEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPA 355
P+LLA SP RR+R+AQ SG TE+ V LV++ RM++LM M G +PA
Sbjct: 386 RNPDLLASSPSRRRRIAQGSGHTEKDVRGLVSEF----TRMRSLMQQMGQGQMPA 436
>gi|425454517|ref|ZP_18834254.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9807]
gi|389804798|emb|CCI15909.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9807]
Length = 478
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/344 (60%), Positives = 265/344 (77%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A PTVIL+AGLQG GKTT +AKLA YL+KQ KSC++VA DVYRPAAID
Sbjct: 86 MGESNVPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G++ P IA+QG+E+AK+ VD VI+DTAGRLQID MM EL
Sbjct: 146 QLITLGKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELG 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K+++NP + LLVVDAMTGQEAA+L TF+ +IGITGAILTKLDGD+RGGAALSV+++S
Sbjct: 206 QIKKIVNPDDTLLVVDAMTGQEAASLTNTFHQQIGITGAILTKLDGDTRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ KI+ A
Sbjct: 266 GQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQAKILEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +MT EER
Sbjct: 326 KFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINSMTTEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P+LLA+SP RR+R+A+ SG E +V++L+A +MR M+ +
Sbjct: 386 ANPDLLAKSPNRRRRIAKGSGHPETEVTKLIANFTRMRSMMQQM 429
>gi|359457209|ref|ZP_09245772.1| signal recognition particle protein [Acaryochloris sp. CCMEE 5410]
Length = 476
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/338 (61%), Positives = 261/338 (77%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L + PTVIL+AGLQG GKTT +AKLA +L+KQ ++ +LVA D+YRPAAID
Sbjct: 86 MGATNEPLAESNKPPTVILMAGLQGTGKTTATAKLALHLRKQEQTSLLVATDIYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLV LGEQ+ VPV+ GT+ P +IA+QGL A+++NVD VIVDTAGRLQID MM EL
Sbjct: 146 QLVTLGEQIDVPVFQLGTDANPVEIARQGLAAAREQNVDTVIVDTAGRLQIDPEMMSELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K+ + P E LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGD+RGGAALS++++S
Sbjct: 206 DIKKAIKPDETLLVVDAMTGQEAANLTQTFHDQIGITGAILTKMDGDTRGGAALSIRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQKKIM A
Sbjct: 266 GKPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDIADAEKMQKKIMEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQ R + MGS+ V+ +IPGMGKI+ +Q++E E L+ EAMI +MT EER
Sbjct: 326 QFDFTDFLKQMRLLKNMGSLGGVMKLIPGMGKISNSQLQEGETKLQQTEAMINSMTKEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 338
+ P+LL+ SP RR+R+A+ SG T+ V +LV + +MR
Sbjct: 386 KNPQLLSNSPSRRRRIAKGSGYTQNDVGKLVTEFQRMR 423
>gi|158337260|ref|YP_001518435.1| signal recognition particle protein [Acaryochloris marina
MBIC11017]
gi|158307501|gb|ABW29118.1| signal recognition particle protein [Acaryochloris marina
MBIC11017]
Length = 476
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/338 (61%), Positives = 260/338 (76%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L + PTVIL+AGLQG GKTT +AKLA +L+KQ ++ +LVA D+YRPAAID
Sbjct: 86 MGATNEPLAESNKPPTVILMAGLQGTGKTTATAKLALHLRKQEQTSLLVATDIYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLV LGEQ+ VPV+ GT+ P +IA+QGL A+++NVD VIVDTAGRLQID MM EL
Sbjct: 146 QLVTLGEQIDVPVFQLGTDANPVEIARQGLAAAREQNVDTVIVDTAGRLQIDPEMMSELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K+ + P E LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGD+RGGAALS++++S
Sbjct: 206 DIKKAIKPDETLLVVDAMTGQEAANLTQTFHDQIGITGAILTKMDGDTRGGAALSIRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQKKIM A
Sbjct: 266 GKPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDIADAEKMQKKIMEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQ R + MGS+ V+ +IPGM KI+ +Q++E E LK EAMI +MT EER
Sbjct: 326 QFDFTDFLKQMRLLKNMGSLGGVMKLIPGMNKISNSQLQEGETKLKQTEAMINSMTKEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 338
+ P+LL+ SP RR+R+A+ SG T+ V +LV + +MR
Sbjct: 386 KNPQLLSNSPSRRRRIAKGSGYTQNDVGKLVTEFQRMR 423
>gi|428773330|ref|YP_007165118.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cyanobacterium stanieri PCC 7202]
gi|428687609|gb|AFZ47469.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cyanobacterium stanieri PCC 7202]
Length = 483
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/344 (59%), Positives = 264/344 (76%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A+ PTVIL+AGLQG GKTT +AKLA YL+KQ +SC++VA DVYRPAAID
Sbjct: 86 MGESNVPLAKAEKAPTVILMAGLQGTGKTTATAKLALYLQKQKRSCLMVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LGEQ+ +PV+ G++ P +IA+QG+ A+++ +D VI+DTAGRLQID+ MM EL
Sbjct: 146 QLITLGEQIKIPVFELGSDANPVEIARQGVVSAQEQGIDTVIIDTAGRLQIDQEMMGELS 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K +NP EVLLVVDAMTGQEAA L TF+ EIGITGAILTK+DGDSRGGAALSV+ +S
Sbjct: 206 QIKSTVNPDEVLLVVDAMTGQEAANLTRTFHEEIGITGAILTKMDGDSRGGAALSVRTIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE++E LEPFYPDRMA RIL MGD++S VEKAQE + D E+MQ+K+M A
Sbjct: 266 GKPIKFIGVGEKVEALEPFYPDRMASRILNMGDIVSLVEKAQEELDIGDVEKMQRKMMEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ R + MGS + V+ +IPGM KI + + E LKI E++I +MT +ER
Sbjct: 326 KFDFNDFLKQMRLLKNMGSFAGVMKLIPGMNKIGAGALEKGESQLKITESIINSMTKQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E PELLA+SP RR+R+AQ SG E++VS+L++ +MR M+ +
Sbjct: 386 ENPELLAKSPSRRRRIAQGSGHQEKEVSRLISDFTRMRSMMQQM 429
>gi|422301683|ref|ZP_16389048.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9806]
gi|425440580|ref|ZP_18820878.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9717]
gi|389718934|emb|CCH97164.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9717]
gi|389789195|emb|CCI14703.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9806]
Length = 478
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/344 (59%), Positives = 264/344 (76%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A PTVIL+AGLQG GKTT +AKLA YL+KQ KSC++VA DVYRPAAID
Sbjct: 86 MGESNVPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G++ P IA+QG+E+AK+ VD VI+DTAGRLQID MM EL
Sbjct: 146 QLITLGKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K+++ P + LLVVDAMTGQEAA+L TF+ +IGITGAILTKLDGD+RGGAALSV+++S
Sbjct: 206 QIKKIVKPDDTLLVVDAMTGQEAASLTNTFHQQIGITGAILTKLDGDTRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ KI+ A
Sbjct: 266 GQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQAKILEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +MT EER
Sbjct: 326 KFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINSMTTEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P+LLA+SP RR+R+A+ SG E +V++L+A +MR M+ +
Sbjct: 386 ANPDLLAKSPNRRRRIAKGSGHPETEVTKLIANFTRMRSMMQQM 429
>gi|425451260|ref|ZP_18831082.1| Signal recognition particle protein [Microcystis aeruginosa PCC
7941]
gi|389767641|emb|CCI07099.1| Signal recognition particle protein [Microcystis aeruginosa PCC
7941]
Length = 478
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/344 (60%), Positives = 263/344 (76%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A PTVIL+AGLQG GKTT +AKLA YL+KQ KSC++VA DVYRPAAID
Sbjct: 86 MGESNVPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G++ P IA+QG+E+AK+ VD VI+DTAGRLQID MM EL
Sbjct: 146 QLITLGKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K+++ P + LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGD+RGGAALSV+++S
Sbjct: 206 QIKKIVKPDDTLLVVDAMTGQEAANLTHTFHQQIGITGAILTKLDGDTRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ KI+ A
Sbjct: 266 GQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQAKILEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +MT EER
Sbjct: 326 KFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINSMTTEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P+LLA+SP RR+R+A+ SG E +VS+L+A +MR M+ +
Sbjct: 386 ANPDLLAKSPNRRRRIAKGSGHPETEVSKLIANFTRMRSMMQQM 429
>gi|166368109|ref|YP_001660382.1| signal recognition particle protein [Microcystis aeruginosa
NIES-843]
gi|166090482|dbj|BAG05190.1| signal recognition particle protein [Microcystis aeruginosa
NIES-843]
Length = 478
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/344 (59%), Positives = 263/344 (76%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A PTVIL+AGLQG GKTT +AKLA YL+KQ KSC++VA DVYRPAAID
Sbjct: 86 MGESNVPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G++ P IA+QG+E+AK+ VD VI+DTAGRLQID MM EL
Sbjct: 146 QLITLGKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K+++ P + LLVVDAMTGQEAA+L TF+ +IGITGAILTKLDGD+RGGAALSV+++S
Sbjct: 206 QIKKIVKPDDTLLVVDAMTGQEAASLTNTFHQQIGITGAILTKLDGDTRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ KI+ A
Sbjct: 266 GQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQAKILEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +MT EER
Sbjct: 326 KFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINSMTTEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P+LLA+SP RR+R+A+ SG E +V++L+ +MR M+ +
Sbjct: 386 ANPDLLAKSPNRRRRIAKGSGHPETEVTKLITNFTRMRSMMQQM 429
>gi|425470966|ref|ZP_18849826.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9701]
gi|389883283|emb|CCI36344.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9701]
Length = 478
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/344 (59%), Positives = 263/344 (76%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A PTVIL+AGLQG GKTT +AKLA YL+KQ KSC++VA DVYRPAAID
Sbjct: 86 MGESNVPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G++ P IA+QG+E+AK+ VD VI+DTAGRLQID MM EL
Sbjct: 146 QLITLGKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K+++ P + LLVVDAMTGQEAA+L TF+ +IGITGAILTKLDGD+RGGAALSV+++S
Sbjct: 206 QIKKIVKPDDTLLVVDAMTGQEAASLTNTFHQQIGITGAILTKLDGDTRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ KI+ A
Sbjct: 266 GQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQAKILEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +MT EER
Sbjct: 326 KFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINSMTTEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P+LLA+SP RR+R+A+ SG E +V++L+ +MR M+ +
Sbjct: 386 ANPDLLAKSPNRRRRIAKGSGHPETEVNKLITNFTRMRSMMQQM 429
>gi|425464792|ref|ZP_18844102.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9809]
gi|389833087|emb|CCI22684.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9809]
Length = 478
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/344 (59%), Positives = 262/344 (76%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A PTVIL+AGLQG GKTT +AKLA YL+KQ KSC++VA DVYRPAAID
Sbjct: 86 MGESNVPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G++ P IA+QG+E+AK+ VD VI+DTAGRLQID MM EL
Sbjct: 146 QLITLGKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K+++ P + LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGD+RGGAALSV+++S
Sbjct: 206 QIKKIVKPDDTLLVVDAMTGQEAANLTNTFHQQIGITGAILTKLDGDTRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ KI+ A
Sbjct: 266 GQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQAKILEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +MT EER
Sbjct: 326 KFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINSMTTEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P+LLA+SP RR+R+A+ SG E +V++L+ +MR M+ +
Sbjct: 386 ANPDLLAKSPNRRRRIAKGSGHPETEVTKLITNFTRMRSMMQQM 429
>gi|390437797|ref|ZP_10226315.1| Signal recognition particle protein [Microcystis sp. T1-4]
gi|389838790|emb|CCI30439.1| Signal recognition particle protein [Microcystis sp. T1-4]
Length = 478
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/344 (59%), Positives = 263/344 (76%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A PTVIL+AGLQG GKTT +AKLA YL+KQ KSC++VA DVYRPAAID
Sbjct: 86 MGESNVPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G++ P IA+QG+E+AK+ VD VI+DTAGRLQID MM +L
Sbjct: 146 QLITLGKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGQLA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K+++ P + LLVVDAMTGQEAA+L TF+ +IGITGAILTKLDGD+RGGAALSV+++S
Sbjct: 206 QIKKIVKPDDTLLVVDAMTGQEAASLTNTFHQQIGITGAILTKLDGDTRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ KI+ A
Sbjct: 266 GQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQAKILEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +MT EER
Sbjct: 326 KFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINSMTTEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P+LLA+SP RR+R+A+ SG E +V++L+ +MR M+ +
Sbjct: 386 ANPDLLAKSPNRRRRIAKGSGHPETEVNKLITNFTRMRSMMQQM 429
>gi|254414856|ref|ZP_05028620.1| signal recognition particle protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196178345|gb|EDX73345.1| signal recognition particle protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 486
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/344 (59%), Positives = 263/344 (76%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A + PT++L+AGLQG GKTT +AKLA +L K+ +SC++VA DVYRPAAID
Sbjct: 86 MGESNVPLAKADTSPTIVLMAGLQGTGKTTATAKLALHLGKENRSCLMVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLV LGEQ+ +PV+ GT+ P +IA QG+ AK+ VD VI+DTAGRLQID MM EL
Sbjct: 146 QLVTLGEQINIPVFEMGTDTNPVEIACQGVAHAKETGVDTVIIDTAGRLQIDAEMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P EVLLVVDAMTGQEAA L TFN +IGITGAILTKLDGD+RGGAALSV++VS
Sbjct: 206 QIKDNVKPDEVLLVVDAMTGQEAATLTHTFNQQIGITGAILTKLDGDTRGGAALSVRQVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DA +MQ+K+++A
Sbjct: 266 GQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDMADAAQMQEKMLNA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF+DFLKQ R + MGS+ ++ ++PGMGK++ Q+ + E LK EAMI +MT EER
Sbjct: 326 QFDFSDFLKQMRLLKNMGSLGGLMKLMPGMGKLSSDQLEKGEGKLKQTEAMINSMTAEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P+LLA SP RR+R+A+ SG +E++VS L+++ +MR MK +
Sbjct: 386 RNPDLLAGSPSRRRRIARGSGHSEREVSSLISEFTKMRSLMKQM 429
>gi|427709147|ref|YP_007051524.1| signal recognition particle subunit FFH/SRP54 (srp54) [Nostoc sp.
PCC 7107]
gi|427361652|gb|AFY44374.1| signal recognition particle subunit FFH/SRP54 (srp54) [Nostoc sp.
PCC 7107]
Length = 491
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/344 (59%), Positives = 264/344 (76%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG E L A+ +PTV+L+AGLQG GKTT +AKLA +L+K +SC+LVA D+YRPAAID
Sbjct: 86 MGEENIPLAEAEQKPTVVLMAGLQGTGKTTATAKLALHLRKLDRSCLLVATDIYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G++ P +IA+QGLE AK + V+ VI+DTAGRLQID+ MM EL
Sbjct: 146 QLITLGKQIDVPVFDLGSDADPVEIARQGLERAKAEGVNTVIIDTAGRLQIDEDMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGDSRGGAALSV+++S
Sbjct: 206 RIKATVQPHETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKLDGDSRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE++E L+PFYP+RMA RILGMGDVL+ VEKAQE + DAE+MQ+KI+SA
Sbjct: 266 GAPIKFVGIGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEIDLADAEQMQEKILSA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQ R + MGS+ ++ MIPGMGK++ Q+++ E LK EAMI +MT +ER
Sbjct: 326 KFDFTDFLKQLRLLKNMGSLGGILKMIPGMGKLSDDQLKQGETQLKRCEAMINSMTKQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+ P+LLA SP RR+RVA SG E +S+LV+ +MR M+ +
Sbjct: 386 QDPDLLASSPSRRRRVASGSGYKEADISKLVSDFQKMRSLMQQM 429
>gi|427418338|ref|ZP_18908521.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leptolyngbya
sp. PCC 7375]
gi|425761051|gb|EKV01904.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leptolyngbya
sp. PCC 7375]
Length = 493
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/343 (59%), Positives = 266/343 (77%), Gaps = 1/343 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L +S+PTV+L+AGLQG GKTT SAKLA +L+KQ +S MLVA DVYRPAA+D
Sbjct: 86 MGDANEPLADVESKPTVVLMAGLQGTGKTTASAKLALHLRKQERSAMLVATDVYRPAAVD 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ GT+ P IAK G+ +A++ VD VIVDTAGRLQID+ MM EL+
Sbjct: 146 QLITLGKQIKVPVFEMGTDANPVDIAKAGIAKAQEDGVDTVIVDTAGRLQIDQDMMAELE 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K ++P EVLLVVDAMTGQEAA L TF+ +IGITGAILTK+DGDSRGGAALS++++S
Sbjct: 206 QIKTAISPDEVLLVVDAMTGQEAATLTQTFHEQIGITGAILTKMDGDSRGGAALSIRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE++Q KI+ A
Sbjct: 266 GKPIKFIGIGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEVDIADAEKLQAKILEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFLKQTR + MGS++ ++ +IPGM K++ Q+++ E L+ EAMI +MT +E
Sbjct: 326 RFDFNDFLKQTRLMKNMGSLTGIMKLIPGMSNKLSADQLQQGETQLRRCEAMINSMTKQE 385
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
RE P+LLA SP RR+R+A+ SG ++ VS+LV+ +MR MK
Sbjct: 386 REDPDLLANSPGRRRRIAKGSGYNDKDVSKLVSDFQKMRSMMK 428
>gi|113476149|ref|YP_722210.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Trichodesmium erythraeum IMS101]
gi|110167197|gb|ABG51737.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Trichodesmium erythraeum IMS101]
Length = 483
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/377 (56%), Positives = 277/377 (73%), Gaps = 9/377 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG + L A PT++L+AGLQG GKTT SAKLA +L+K+ +S +LVA DVYRPAAID
Sbjct: 86 MGESNAPLAKADQPPTIVLMAGLQGTGKTTASAKLALHLRKENRSALLVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLV LG+Q+ VPV+ GT++ P +IA++GLE+AK +D+VI+DTAGRLQID+ MM EL
Sbjct: 146 QLVTLGKQIDVPVFELGTDIDPVEIAQKGLEKAKADGIDIVIIDTAGRLQIDQDMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E LLVVDAMTGQEAA L TFN +IGITGAILTK+DGD+RGGAALSV+ +S
Sbjct: 206 RIKAAVKPQETLLVVDAMTGQEAATLTRTFNDQIGITGAILTKMDGDTRGGAALSVRRIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK +G GE++E L+PFYP+RMA RILGMGDVL+ VEKAQE DAE+MQ+KI+SA
Sbjct: 266 GQPIKFIGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEFDIADAEKMQEKILSA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQTR + MGS+ ++ +IPGM KI+ ++++ E LK E+MI +MT +ER
Sbjct: 326 KFDFTDFLKQTRLMKNMGSLGGIMKLIPGMNKISDDKLQQGETQLKRCESMINSMTRQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP-----A 355
+ PELLA+SP RR+R+A SG E+ VS+LV+ FQ RM++LM M G L
Sbjct: 386 QNPELLAKSPSRRRRIAGGSGYAEKDVSKLVSD-FQ---RMRSLMQKMGQGDLSGMGMPG 441
Query: 356 LSNLEDALKSEQKAPPG 372
+ + KAPPG
Sbjct: 442 MPGMGMPGMLGGKAPPG 458
>gi|428301996|ref|YP_007140302.1| signal recognition particle subunit FFH/SRP54 (srp54) [Calothrix
sp. PCC 6303]
gi|428238540|gb|AFZ04330.1| signal recognition particle subunit FFH/SRP54 (srp54) [Calothrix
sp. PCC 6303]
Length = 487
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/344 (59%), Positives = 261/344 (75%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG E L A + PTV+L+AGLQG GKTT +AKLA +L+K ++C++VA DVYRPAAID
Sbjct: 86 MGEENVPLAQASTSPTVVLMAGLQGTGKTTATAKLALHLRKLNRTCLMVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G++ P +IA+QG+ + K VD VI+DTAGRLQID+ MM EL
Sbjct: 146 QLITLGKQIEVPVFQLGSDADPVEIARQGIAQGKADGVDTVIIDTAGRLQIDQDMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E+LLVVD+MTGQEAA L TF+ +IGITGAILTK+DGDSRGGAALSV+++S
Sbjct: 206 QIKATVQPHEILLVVDSMTGQEAANLTRTFHDQIGITGAILTKMDGDSRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ+KI+SA
Sbjct: 266 GQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLADAEKMQEKILSA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQ R + MGS+ +I MIPGM K+T Q+++ E LK EAMI +MT +ER
Sbjct: 326 KFDFTDFLKQLRLLKNMGSLGGIIKMIPGMNKLTDDQLKQGETQLKRCEAMINSMTQQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P+LLA SP RR+RVA SG E VS+LV+ +MR M+ +
Sbjct: 386 RDPDLLASSPSRRRRVAGGSGYKENDVSKLVSDFQRMRGMMQQM 429
>gi|254421926|ref|ZP_05035644.1| signal recognition particle protein [Synechococcus sp. PCC 7335]
gi|196189415|gb|EDX84379.1| signal recognition particle protein [Synechococcus sp. PCC 7335]
Length = 491
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/354 (60%), Positives = 273/354 (77%), Gaps = 5/354 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L ++++PTV+L+AGLQG GKTT SAKLA +L+KQ +S +LVA DVYRPAAID
Sbjct: 86 MGDTNVPLADSENKPTVVLMAGLQGTGKTTASAKLALHLRKQERSALLVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G + P +IA+QGL++AK +D VI+DTAGRLQID MM EL
Sbjct: 146 QLLTLGKQIDVPVFEIGADANPVEIARQGLKKAKADGIDTVIIDTAGRLQIDTDMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
VK V P EVLLVVDAMTGQEAA L TF+ EIGITGAILTK+DGDSRGGAALSV+ +S
Sbjct: 206 QVKEVAQPDEVLLVVDAMTGQEAATLTRTFHDEIGITGAILTKMDGDSRGGAALSVRRIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK +G GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE++Q+KI+SA
Sbjct: 266 GQPIKFIGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEVDIADAEKLQEKILSA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFLKQTR + MGS++ ++ MIPGMG K++ Q+++ E+ LK EAMI +MT EE
Sbjct: 326 KFDFNDFLKQTRLMKNMGSLAGIMKMIPGMGNKLSSDQLQQGEQQLKRCEAMINSMTMEE 385
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 353
R+ PE+L+ SP RR+RVA+ +G E+ V +LV+ FQ RM+ LM M G++
Sbjct: 386 RQNPEVLSGSPSRRRRVAKGAGYAEKDVGKLVSD-FQ---RMRGLMQQMGQGNM 435
>gi|427730772|ref|YP_007077009.1| signal recognition particle subunit FFH/SRP54 (srp54) [Nostoc sp.
PCC 7524]
gi|427366691|gb|AFY49412.1| signal recognition particle subunit FFH/SRP54 (srp54) [Nostoc sp.
PCC 7524]
Length = 489
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/344 (59%), Positives = 262/344 (76%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG E L + +PT++L+AGLQG GKTT +AKLA +L+K +SC+LVA DVYRPAAID
Sbjct: 86 MGEENVPLTETEQKPTIVLMAGLQGTGKTTATAKLALHLRKLERSCLLVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G++ P +IA+QG+E AK + V+ VI+DTAGRLQID+ MM EL
Sbjct: 146 QLITLGKQIDVPVFELGSDADPVEIARQGVERAKAEGVNTVIIDTAGRLQIDEDMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGDSRGGAALSV+++S
Sbjct: 206 RIKATVQPDETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKLDGDSRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ+KI+SA
Sbjct: 266 GAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLADAEQMQEKILSA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQ R + MGS+ ++ MIPGMGK++ Q+++ E LK E+MI +MT +ER
Sbjct: 326 KFDFTDFLKQLRLLKNMGSLGGILKMIPGMGKLSDDQLKQGETQLKRCESMINSMTAQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P+LLA SP RR+R+A SG E V++LVA +MR M+ +
Sbjct: 386 RDPDLLASSPNRRRRIANGSGYKEADVNKLVADFQKMRSLMQQM 429
>gi|428781665|ref|YP_007173451.1| signal recognition particle protein [Dactylococcopsis salina PCC
8305]
gi|428695944|gb|AFZ52094.1| signal recognition particle protein [Dactylococcopsis salina PCC
8305]
Length = 484
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/342 (59%), Positives = 262/342 (76%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A++ PT+IL+AGLQG GKTT +AKLA +L+KQ +S ++V DVYRPAAID
Sbjct: 86 MGESNVPLAQAETPPTIILMAGLQGTGKTTATAKLALHLRKQNRSALMVGTDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LGEQ+ VPV+ GTE P ++AKQG+E+AK +D VI+DTAGRLQID+ MM EL
Sbjct: 146 QLKTLGEQIDVPVFEMGTEANPVEVAKQGVEKAKTDGIDTVIIDTAGRLQIDQNMMGELI 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
VK+ ++P EVLLVVDAMTGQEAA+L TF+ ++G+TGAILTKLDGD+RGGAALSV++VS
Sbjct: 206 AVKKAISPHEVLLVVDAMTGQEAASLTDTFHQQVGVTGAILTKLDGDTRGGAALSVRQVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK +G GE++E L+PFYP+RMA RILGMGDV+S VEKAQE + DAE MQ K++ A
Sbjct: 266 GQPIKFIGVGEKVEALQPFYPERMASRILGMGDVVSLVEKAQEEIDMADAEAMQAKMLEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ R + MGS ++ MIPGM K++ + + + E LK EAMI +MT +ER
Sbjct: 326 RFDFNDFLKQMRLLKNMGSFGSIMKMIPGMNKLSGSDIEKGETQLKRTEAMINSMTKQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
E+PELLA+SP RR+RV + SG E+ VS+LV +MR M+
Sbjct: 386 EEPELLAKSPGRRRRVGKGSGHQEKDVSKLVEDFRKMRSMMQ 427
>gi|434392620|ref|YP_007127567.1| signal recognition particle subunit FFH/SRP54 (srp54) [Gloeocapsa
sp. PCC 7428]
gi|428264461|gb|AFZ30407.1| signal recognition particle subunit FFH/SRP54 (srp54) [Gloeocapsa
sp. PCC 7428]
Length = 484
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/344 (59%), Positives = 260/344 (75%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A+ PT++L+AGLQG GKTT +AKLA +L+K +SCM+VA DVYRPAAID
Sbjct: 86 MGETNVPLAQAEQPPTIVLMAGLQGTGKTTATAKLALHLRKLERSCMMVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLV LG+Q+ VPV+ G++ P +IA+QG+E AK + VD VI+DTAGRLQID+ MM EL
Sbjct: 146 QLVTLGKQIEVPVFEMGSDANPVEIARQGVERAKAEGVDTVIIDTAGRLQIDQDMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P EVLLVVDAMTGQEAA L TF+ EIGITGAILTKLDGDSRGGAALSV+++S
Sbjct: 206 QIKETVQPHEVLLVVDAMTGQEAANLTRTFHDEIGITGAILTKLDGDSRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DA +MQ+KIM+A
Sbjct: 266 GQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLADAAKMQEKIMAA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQ R + MGS+ ++ +IPGM K++ Q+++ E LK EAMI +MT +ER
Sbjct: 326 KFDFTDFLKQMRLLKNMGSLGGIMKLIPGMNKLSEDQLKQGETQLKRAEAMINSMTAQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P+LLA SP RRKR+A SG E V++LV +MR M+ +
Sbjct: 386 RDPDLLASSPSRRKRIANGSGYKEADVNKLVGDFQKMRSLMQQM 429
>gi|334117488|ref|ZP_08491579.1| signal recognition particle protein [Microcoleus vaginatus FGP-2]
gi|333460597|gb|EGK89205.1| signal recognition particle protein [Microcoleus vaginatus FGP-2]
Length = 482
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/344 (59%), Positives = 260/344 (75%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A S PTVIL+AGLQG GKTT +AKLA +L+KQ ++ +LVA D+YRPAAID
Sbjct: 86 MGETNVPLATADSGPTVILMAGLQGTGKTTATAKLALHLRKQNRTALLVATDIYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G ++ P +IA+QG+E K+ +D +IVDTAGRLQID+ MM EL
Sbjct: 146 QLLTLGKQIDVPVFELGKDIDPVEIARQGIEHGKQIGIDTIIVDTAGRLQIDQDMMAELG 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K+ + P E LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGDSRGGAALSV+++S
Sbjct: 206 RIKQTVQPHETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKLDGDSRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQ+K+++A
Sbjct: 266 GAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDIADAEKMQEKMLTA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQTR + MGS+ ++ MIPGM K++ Q+R+ E LK EAMI +MT EER
Sbjct: 326 KFDFTDFLKQTRLLKNMGSLGGIMKMIPGMNKLSDEQMRQGEVQLKRTEAMINSMTVEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
PELLA SP RR+R+ + +G E V++LV+ +MR M+ +
Sbjct: 386 RNPELLASSPSRRRRIGKGAGYAENDVTKLVSDFQKMRTMMQQM 429
>gi|428317311|ref|YP_007115193.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oscillatoria
nigro-viridis PCC 7112]
gi|428240991|gb|AFZ06777.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oscillatoria
nigro-viridis PCC 7112]
Length = 482
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/344 (58%), Positives = 261/344 (75%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A+S PTV+L+AGLQG GKTT +AKLA +L+KQ ++ +LVA D+YRPAAID
Sbjct: 86 MGETNVPLATAESGPTVVLMAGLQGTGKTTATAKLALHLRKQNRTALLVATDIYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G ++ P +IA+QG+E K+ +D +IVDTAGRLQID+ MM EL
Sbjct: 146 QLLTLGKQIDVPVFELGKDIDPVEIARQGIEHGKQIGIDTIIVDTAGRLQIDQDMMAELG 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K+ + P E LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGDSRGGAALSV+++S
Sbjct: 206 RIKQTVQPHETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKLDGDSRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQ+K+++A
Sbjct: 266 GAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDIADAEKMQQKMLTA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQTR + MGS+ ++ MIPGM K++ Q+R+ E LK EAMI +MT EER
Sbjct: 326 KFDFTDFLKQTRLLKNMGSLGGIMKMIPGMNKLSDEQMRQGEVQLKRTEAMINSMTVEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
PELLA SP RR+R+ + +G E V++LV+ +MR M+ +
Sbjct: 386 RNPELLASSPSRRRRIGKGAGYAENDVTKLVSDFQKMRTMMQQM 429
>gi|257058483|ref|YP_003136371.1| signal recognition particle protein [Cyanothece sp. PCC 8802]
gi|256588649|gb|ACU99535.1| signal recognition particle protein [Cyanothece sp. PCC 8802]
Length = 492
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/338 (58%), Positives = 258/338 (76%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L + PTVIL+AGLQG GKTT +AKLA YL+KQ +SC++VA D+YRPAAID
Sbjct: 86 MGESNVPLATTATAPTVILMAGLQGTGKTTATAKLALYLRKQKRSCLMVATDIYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G+E P IA+QG+E+AK+ VD V++DTAGRLQID++MM EL
Sbjct: 146 QLITLGQQIEVPVFELGSEANPVDIARQGVEKAKELGVDTVLIDTAGRLQIDESMMVELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P + LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGD+RGGAALSV+++S
Sbjct: 206 RIKEAVKPDDTLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDTRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK +G GE++E L+PFYPDRMA RIL MGD+LS VEKAQE + D E+MQ KI+ A
Sbjct: 266 GQPIKFIGVGEKVEALQPFYPDRMASRILNMGDILSLVEKAQEEIDIADVEKMQSKILEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ R + MGS+ ++ MIPG+ K++ + + EK LK EAMI +MT EER
Sbjct: 326 KFDFNDFLKQMRLMKNMGSLGGLLKMIPGLNKLSSTDIEKGEKELKRTEAMINSMTVEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 338
+ P+LLA+SP RR+R+A+ SG E +VS+LV +MR
Sbjct: 386 KNPDLLAKSPSRRRRIAKGSGHAESEVSKLVTNFTRMR 423
>gi|218245446|ref|YP_002370817.1| signal recognition particle protein [Cyanothece sp. PCC 8801]
gi|218165924|gb|ACK64661.1| signal recognition particle protein [Cyanothece sp. PCC 8801]
Length = 492
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/338 (58%), Positives = 258/338 (76%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L + PTVIL+AGLQG GKTT +AKLA YL+KQ +SC++VA D+YRPAAID
Sbjct: 86 MGESNVPLATTATAPTVILMAGLQGTGKTTATAKLALYLRKQKRSCLMVATDIYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G+E P IA+QG+E+AK+ VD V++DTAGRLQID++MM EL
Sbjct: 146 QLITLGQQIEVPVFELGSEANPVDIARQGVEKAKELGVDTVLIDTAGRLQIDESMMVELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P + LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGD+RGGAALSV+++S
Sbjct: 206 RIKEAVKPDDTLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDTRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK +G GE++E L+PFYPDRMA RIL MGD+LS VEKAQE + D E+MQ KI+ A
Sbjct: 266 GQPIKFIGVGEKVEALQPFYPDRMASRILNMGDILSLVEKAQEEIDIADVEKMQSKILEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ R + MGS+ ++ MIPG+ K++ + + EK LK EAMI +MT EER
Sbjct: 326 KFDFNDFLKQMRLMKNMGSLGGLLKMIPGLNKLSSTDIEKGEKELKRTEAMINSMTVEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 338
+ P+LLA+SP RR+R+A+ SG E +VS+LV +MR
Sbjct: 386 KNPDLLAKSPSRRRRIAKGSGHAESEVSKLVTNFTRMR 423
>gi|443321269|ref|ZP_21050328.1| signal recognition particle subunit FFH/SRP54 (srp54) [Gloeocapsa
sp. PCC 73106]
gi|442789014|gb|ELR98688.1| signal recognition particle subunit FFH/SRP54 (srp54) [Gloeocapsa
sp. PCC 73106]
Length = 481
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/356 (57%), Positives = 262/356 (73%), Gaps = 4/356 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A PTVIL+AGLQG GKTT +AKLA YL+KQ +SC++VA D+YRPAAI
Sbjct: 86 MGESNVPLAQATQSPTVILMAGLQGTGKTTATAKLALYLQKQKRSCLMVATDIYRPAAIA 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ +PV+ GT+V P +IA+QG+ +AK+ VD VI+DTAGRLQID MM EL
Sbjct: 146 QLLTLGKQIDIPVFELGTQVNPVEIARQGVAKAKEMGVDTVIIDTAGRLQIDPEMMAELS 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+KR P + LLVVDAMTGQEAA L TFN EIGITGAILTK+DGDSRGGAALSV+++S
Sbjct: 206 QIKRATQPHDTLLVVDAMTGQEAANLTRTFNDEIGITGAILTKMDGDSRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E LEPFYPDR+A RIL MGD+L+ VEKAQE + D E+M KI A
Sbjct: 266 GQPIKFVGVGEKVEALEPFYPDRLASRILNMGDILTLVEKAQEELDIADLEKMHAKITEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ R + MGS+ ++ +IPGM K++ + + + E LK EAMI +MT EER
Sbjct: 326 KFDFNDFLKQMRLLKNMGSLGGILKLIPGMNKLSNSDLAKGESQLKQTEAMINSMTKEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 356
P+LL++SP RR+R+A+ SG E+ +S+LV RM+++M M G +PAL
Sbjct: 386 SNPDLLSKSPGRRRRIAKGSGFQEKDISKLVTDF----TRMRSMMQQMSSGGMPAL 437
>gi|119510257|ref|ZP_01629394.1| signal recognition particle protein [Nodularia spumigena CCY9414]
gi|119465106|gb|EAW46006.1| signal recognition particle protein [Nodularia spumigena CCY9414]
Length = 490
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/355 (58%), Positives = 267/355 (75%), Gaps = 4/355 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG E L + +PT++L+AGLQG GKTT +AKLA +L+K +SC+LVA DVYRPAAID
Sbjct: 86 MGAENVPLAETEEKPTIVLMAGLQGTGKTTATAKLALHLRKLERSCLLVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLV LG+Q+ VPV+ G++ P +IA+QG+E AK + + VI+DTAGRLQID+ MM EL
Sbjct: 146 QLVTLGKQIDVPVFELGSDADPVEIARQGVERAKAEGFNTVIIDTAGRLQIDEDMMGELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E LLVVD+MTGQEAA L TF+ +IGITGAILTKLDGD+RGGAALSV+++S
Sbjct: 206 RIKATVQPHETLLVVDSMTGQEAANLTRTFHDKIGITGAILTKLDGDTRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE++E L+PFYP+RMA RILGMGDVLS VEKAQE DAE+MQ KI+SA
Sbjct: 266 GAPIKFVGVGEKVEALQPFYPERMASRILGMGDVLSLVEKAQEEFDLADAEKMQDKILSA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDF+KQ R + MGS+ ++ +IPGM KI+ Q+++ E LK E+MI +MT +ER
Sbjct: 326 KFDFNDFVKQLRMLKNMGSLGGIMKLIPGMNKISDEQLKQGETQLKRCESMINSMTRQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPA 355
+ P+LLA SP RR+R+A+ SG E VS+LVA FQ +M+ LM M G +PA
Sbjct: 386 QDPDLLASSPSRRRRIAKGSGYREPDVSKLVAD-FQ---KMRTLMQQMGQGQMPA 436
>gi|428223265|ref|YP_007107435.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus sp. PCC 7502]
gi|427996605|gb|AFY75300.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus sp. PCC 7502]
Length = 470
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/342 (59%), Positives = 266/342 (77%), Gaps = 1/342 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG E + L A++ PTVIL+AGLQG GKTT SAKLA +L+K ++ +LVA D+YRPAAID
Sbjct: 86 MGSENAPLAEAETAPTVILMAGLQGTGKTTASAKLALHLRKLNRTTLLVATDIYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG Q+ VPV+ GT+ P +IA+QG+ AK + ++ VIVDTAGRLQID+ MM EL
Sbjct: 146 QLITLGNQIDVPVFQLGTDANPVEIARQGVAHAKAEGINTVIVDTAGRLQIDETMMAELV 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K+ + P EVLLVVDAMTGQEAA L TF+ +IGITGAILTKLDGD+RGGAALSV+E+S
Sbjct: 206 QIKQAIAPHEVLLVVDAMTGQEAANLTRTFHDQIGITGAILTKLDGDTRGGAALSVREIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E L+PFYP+RMA RILGMGDVL+ VEKAQE + DAE++Q+KI+SA
Sbjct: 266 GQPIKFVGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEINIADAEKLQEKILSA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF+DFLK TR + MGS ++ M+PGM KI AQ++EAE LK EAMI +MT +ER
Sbjct: 326 KFDFDDFLKNTRMMKSMGSFGGLLKMLPGM-KINDAQIKEAENQLKRCEAMISSMTKQER 384
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
+ P+LLA+SP R++R+A+ SG Q V++LV+ +MR M+
Sbjct: 385 QDPDLLAKSPSRKQRIAKGSGYQLQDVTKLVSDFQRMRTMMQ 426
>gi|282898237|ref|ZP_06306228.1| Signal recognition particle protein [Raphidiopsis brookii D9]
gi|281196768|gb|EFA71673.1| Signal recognition particle protein [Raphidiopsis brookii D9]
Length = 480
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/354 (59%), Positives = 268/354 (75%), Gaps = 4/354 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG E L A+ + TVIL+AGLQG GKTT +AKLA +L+K +SC+LVA DVYRPAAID
Sbjct: 86 MGEENVPLAQAQDKTTVILMAGLQGTGKTTATAKLALHLRKTNRSCLLVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLV LG+QV VPV+ G++ P +IA+QG+E A+ + ++ VIVDTAGRLQID+ MM EL
Sbjct: 146 QLVTLGKQVDVPVFEMGSDADPVEIARQGVERARNEGINTVIVDTAGRLQIDQDMMAELS 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGDSRGGAALSV+++S
Sbjct: 206 RIKSTIEPDETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDSRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK +G GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ+KI+SA
Sbjct: 266 GAPIKFIGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLADAEKMQEKILSA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQ R + MGS+ ++ +IPGM KI+ Q+++ E LK E+MI +MT +ER
Sbjct: 326 KFDFTDFLKQLRLMKNMGSLGGMMKLIPGMNKISDEQLKKGETQLKRCESMINSMTKKER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 354
+ P+LLA SP RRKR+A SG E VS+LV+ FQ +M++LM M G+ P
Sbjct: 386 KDPDLLASSPSRRKRIASGSGYKESDVSKLVSD-FQ---KMRSLMQQMGQGNFP 435
>gi|434398063|ref|YP_007132067.1| signal recognition particle subunit FFH/SRP54 (srp54) [Stanieria
cyanosphaera PCC 7437]
gi|428269160|gb|AFZ35101.1| signal recognition particle subunit FFH/SRP54 (srp54) [Stanieria
cyanosphaera PCC 7437]
Length = 485
Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/344 (59%), Positives = 259/344 (75%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A PT+IL+AGLQG GKTT +AKLA YL+KQ ++C++VA DVYRPAAI+
Sbjct: 86 MGESNVPLAQADKAPTIILMAGLQGTGKTTATAKLALYLQKQQQTCLMVATDVYRPAAIN 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ GT+ P +IA+QG+E+AK+ VD V++DTAGRLQID+ MM EL
Sbjct: 146 QLLTLGKQINVPVFEMGTDANPVEIARQGIEKAKELGVDTVLIDTAGRLQIDQDMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P + LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGDSRGGAALSV++VS
Sbjct: 206 QIKETVQPHDTLLVVDAMTGQEAANLTRTFHEQIGITGAILTKLDGDSRGGAALSVRQVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E LEPFYPDR+A RIL MGD+L+ VEKAQE + D E MQ KI+ A
Sbjct: 266 GQPIKFVGVGEKVEALEPFYPDRLASRILNMGDILTLVEKAQEEIDLADMENMQSKILEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ R + MGS+ V+ +IPGM KI+ A +++ E LK EAMI +MT EE+
Sbjct: 326 KFDFNDFLKQMRLLKNMGSLGGVLKLIPGMNKISGADLQKGETQLKRTEAMINSMTKEEK 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
PELLA+SP RR+RVA+ SG E VS+L+ +MR M+ +
Sbjct: 386 SNPELLAQSPSRRRRVAKGSGFEETDVSKLIKDFTRMRSLMQQM 429
>gi|284928857|ref|YP_003421379.1| signal recognition particle subunit FFH/SRP54 (srp54)
[cyanobacterium UCYN-A]
gi|284809316|gb|ADB95021.1| signal recognition particle subunit FFH/SRP54 (srp54)
[cyanobacterium UCYN-A]
Length = 494
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/344 (58%), Positives = 257/344 (74%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S L A+S PTVIL+ GLQG GKTT +AKLA+YLKKQ +SC++VA D+YRPAAID
Sbjct: 86 MGESNSPLAKAESDPTVILMVGLQGTGKTTATAKLAHYLKKQKQSCLMVAADIYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LG+Q+ VPV+ G + P IA QG+ +AK+ DVVI+DTAGRLQID+ MM EL
Sbjct: 146 QLKTLGQQIEVPVFELGNQENPVNIALQGVNKAKEIEADVVIIDTAGRLQIDQGMMLELT 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K +NP + LLVVDAMTGQEAA L TF+ +I ITG ILTK+DGD+RGGAALSV++VS
Sbjct: 206 QIKESINPHDTLLVVDAMTGQEAANLAQTFHEKIKITGTILTKMDGDTRGGAALSVRKVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E L+PFYPDRMA RIL MGD+L+ VEKAQE + D E++Q KI+ A
Sbjct: 266 GQPIKFVGVGEKIEALQPFYPDRMASRILNMGDILTLVEKAQEEIDFSDMEQLQSKILDA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQTR + MGS S ++ M+PG+ KI + + E LK EAMI +MT EER
Sbjct: 326 KFDFNDFLKQTRLMKSMGSFSNILKMVPGLNKINTKDIEKGENELKRTEAMIGSMTLEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+ P+LLA+SP RR R+A+ SG +E ++S+L+ +MR M+ L
Sbjct: 386 KDPDLLAKSPSRRYRIAKGSGYSETEISKLIKNFTRMRTMMQQL 429
>gi|282899599|ref|ZP_06307563.1| Signal recognition particle protein [Cylindrospermopsis raciborskii
CS-505]
gi|281195478|gb|EFA70411.1| Signal recognition particle protein [Cylindrospermopsis raciborskii
CS-505]
Length = 480
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/354 (58%), Positives = 269/354 (75%), Gaps = 4/354 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG E L A+++ TV+L+AGLQG GKTT +AKLA +L+K +SC+LVA D+YRPAAID
Sbjct: 86 MGEENVPLAEAQNQTTVVLMAGLQGTGKTTATAKLALHLRKTNRSCLLVATDIYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLV LG+Q+ VPV+ G++ P +IA+QG+E A+ + ++ VIVDTAGRLQID+ MM EL
Sbjct: 146 QLVTLGKQIDVPVFEMGSDADPVEIARQGVERARNEGINTVIVDTAGRLQIDQDMMAELS 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGDSRGGAALSV+++S
Sbjct: 206 RIKSTIEPDETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDSRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK +G GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ+KI+SA
Sbjct: 266 GAPIKFIGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLADAEKMQEKILSA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQ R + MGS+ V+ +IPGM KI+ Q+++ E LK E+MI +MT +ER
Sbjct: 326 RFDFTDFLKQLRLMKNMGSLGGVMKLIPGMNKISDEQLKQGETQLKRCESMISSMTKQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 354
+ P+LLA SP RR+R+A SG E V++LV+ FQ +M++LM M G+ P
Sbjct: 386 KDPDLLASSPSRRRRIASGSGYKESDVTKLVSD-FQ---KMRSLMQQMGQGNFP 435
>gi|307151061|ref|YP_003886445.1| signal recognition particle protein [Cyanothece sp. PCC 7822]
gi|306981289|gb|ADN13170.1| signal recognition particle protein [Cyanothece sp. PCC 7822]
Length = 487
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/344 (57%), Positives = 260/344 (75%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A + PTVIL+AGLQG GKTT +AKLA +L+K+ +SC++VA DVYRPAAID
Sbjct: 86 MGESNVPLAQASTPPTVILMAGLQGTGKTTATAKLALFLRKENRSCLMVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ GTE P +IA+QG+++AK+ VD VI+DTAGRLQID+ MM EL
Sbjct: 146 QLITLGQQIDVPVFELGTEADPVEIARQGVQKAKELGVDTVIIDTAGRLQIDEDMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P + LLVVD+MTGQEAA L TF+ +IGITGAILTKLDGD+RGGAALSV++VS
Sbjct: 206 RIKATVKPHDTLLVVDSMTGQEAATLTHTFHEQIGITGAILTKLDGDTRGGAALSVRQVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E L+PFYPDRMA RIL MGD+++ VEKAQE + D E+MQ KI+ A
Sbjct: 266 GQPIKFVGVGEKVEALQPFYPDRMASRILNMGDIITLVEKAQEELDLSDVEKMQSKILQA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ + + MGS+ ++ +IPGMGK++ A + + E LK E+MI +MT EER
Sbjct: 326 QFDFNDFLKQMKLLKNMGSLGGILKLIPGMGKLSGADIAKGETELKRTESMINSMTAEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P+LLA SP RR+R+A+ SG +E VS L+ +MR M+ +
Sbjct: 386 TNPDLLASSPSRRRRIAKGSGHSESDVSALIKNFSRMRGMMQQM 429
>gi|443312631|ref|ZP_21042247.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechocystis sp. PCC 7509]
gi|442777350|gb|ELR87627.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechocystis sp. PCC 7509]
Length = 482
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/389 (54%), Positives = 275/389 (70%), Gaps = 9/389 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A PT++L+AGLQG GKTT +AKLA +LKK +SC+LVA D+YRPAAID
Sbjct: 86 MGETNVPLAKADQAPTIVLMAGLQGTGKTTATAKLALHLKKINRSCLLVATDIYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLV LG+Q+ VPV+ G++ P +IAK+G+E+AK++ VD VI+DTAGRLQID MM EL
Sbjct: 146 QLVTLGKQIQVPVFEMGSDADPVEIAKRGVEQAKEQGVDTVIIDTAGRLQIDVDMMGELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGDSRGGAALSV++VS
Sbjct: 206 RIKAAVQPQETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKLDGDSRGGAALSVRQVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ+K++SA
Sbjct: 266 GQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLADAEQMQQKMLSA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQ R + MGS+ ++ MIPGM K+ Q+++ E LK EAMI++MT +ER
Sbjct: 326 KFDFTDFLKQMRLLKNMGSLGGLMKMIPGMNKLNSDQLKQGETQLKRCEAMIKSMTTKER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 360
+ P++LA SP RR+R+A SG E V++LV+ +MR M+ M G P + +
Sbjct: 386 KDPDILASSPSRRRRIAGGSGYKESDVAKLVSDFQKMRTMMQQ----MTQGGFPGMPGMF 441
Query: 361 DALKSEQKAPPGTARRKRRSESRRQFVDP 389
+++ P + R + DP
Sbjct: 442 GGMEN-----PAAVGNRPAQAGWRGYSDP 465
>gi|427713289|ref|YP_007061913.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus sp. PCC 6312]
gi|427377418|gb|AFY61370.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus sp. PCC 6312]
Length = 480
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/338 (59%), Positives = 259/338 (76%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A PTVIL+AGLQG GKTT +AKLA +L+K+ ++ +LVA D+YRPAAID
Sbjct: 86 MGESNVPLAQASQAPTVILMAGLQGAGKTTATAKLALHLRKENRTTLLVATDIYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ GTEV P +IA+QG+ + ++ VD VIVDTAGRLQID MM EL
Sbjct: 146 QLLTLGKQINVPVFELGTEVNPVEIARQGIAKGRELGVDTVIVDTAGRLQIDADMMAELG 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K+ + P EVLLVVDAMTGQEAA L F+ +IGITGAILTK+DGD+RGGAALSV+++S
Sbjct: 206 DIKKTVTPDEVLLVVDAMTGQEAANLTQAFHEQIGITGAILTKMDGDTRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK +G GE++E L+PFYPDR+A RILGMGDVL+ VEKAQE + DAE M +KI+ A
Sbjct: 266 GQPIKFIGVGEKVEALQPFYPDRLASRILGMGDVLTLVEKAQEEVDLADAENMTRKILEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQTR + MGS+ ++ +IPGMGKI+ Q+ + E LK E+MI +MT +ER
Sbjct: 326 QFDFNDFLKQTRLLKNMGSLGGIMKLIPGMGKISNEQLEQGESQLKRAESMINSMTRQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 338
E P+LLA SP R+KRVAQ SG + V++LV+ +MR
Sbjct: 386 ENPQLLANSPSRKKRVAQGSGHKLEDVAKLVSDFQRMR 423
>gi|428776938|ref|YP_007168725.1| signal recognition particle subunit FFH/SRP54 (srp54) [Halothece
sp. PCC 7418]
gi|428691217|gb|AFZ44511.1| signal recognition particle subunit FFH/SRP54 (srp54) [Halothece
sp. PCC 7418]
Length = 483
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/338 (60%), Positives = 258/338 (76%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A++ PTVIL+AGLQG GKTT +AKLA +L+KQ +S ++V DVYRPAAID
Sbjct: 86 MGESNVPLAEAETAPTVILMAGLQGTGKTTATAKLALHLRKQNRSALMVGTDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LGEQ+ VPV+ GTE P +AKQG+E+AK + +D V+VDTAGRLQID+ MM EL
Sbjct: 146 QLKTLGEQIDVPVFEMGTEANPVDVAKQGIEKAKAEGIDTVLVDTAGRLQIDQDMMQELI 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K ++P EVLLVVDAMTGQEAA+L TF+ ++G+TGAILTKLDGD+RGGAALSV++VS
Sbjct: 206 AIKNEISPHEVLLVVDAMTGQEAASLTDTFHQQVGVTGAILTKLDGDTRGGAALSVRQVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK +G GE++E L+PFYP+RMA RILGMGDV+S VEKAQE + DAE MQ K++ A
Sbjct: 266 GQPIKFIGVGEKVEALQPFYPERMASRILGMGDVVSLVEKAQEEIDMADAEAMQAKMLEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ R + MGS V+ MIPGM K++ + + + E LK EAMI +MT +ER
Sbjct: 326 RFDFNDFLKQMRLLKNMGSFGSVMKMIPGMNKLSGSDIEKGETQLKRTEAMINSMTKQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 338
E+PELLA+SP RR+RV + SG E+ V +LV +MR
Sbjct: 386 EEPELLAKSPSRRRRVGKGSGHQEKDVVKLVNDFTKMR 423
>gi|443324440|ref|ZP_21053193.1| signal recognition particle subunit FFH/SRP54 (srp54) [Xenococcus
sp. PCC 7305]
gi|442795959|gb|ELS05293.1| signal recognition particle subunit FFH/SRP54 (srp54) [Xenococcus
sp. PCC 7305]
Length = 489
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/342 (60%), Positives = 256/342 (74%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A PTVIL+AGLQG GKTT +AKLA YL+KQ +SC++V DVYRPAAID
Sbjct: 86 MGESNVPLAEADKPPTVILMAGLQGTGKTTATAKLALYLRKQQRSCLMVGTDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ GT+ P +IA+QGL +A++ +VD VIVDTAGRLQID MM EL
Sbjct: 146 QLLTLGKQIDVPVFEMGTDADPVEIARQGLAKAREMSVDTVIVDTAGRLQIDSDMMGELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P +VLLVVD+MTGQEAA L TF+ +IGITGAILTKLDGD+RGGAALSV++VS
Sbjct: 206 QIKETIQPDDVLLVVDSMTGQEAANLTHTFHEQIGITGAILTKLDGDTRGGAALSVRQVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE DA +MQ KIM A
Sbjct: 266 GQPIKFVGTGEKVEALEPFYPDRIASRILNMGDVLTLVEKAQEEFDLADAAQMQAKIMEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ R + MGS+ V+ +IPGM K++ A + + E LK EAMI +MT ER
Sbjct: 326 RFDFNDFLKQMRLLKNMGSLGGVMKLIPGMNKLSGADLEKGETQLKRTEAMINSMTKAER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
+PELLA+SP RR+RVA SG E+ VS+L+ +MR M+
Sbjct: 386 AEPELLAQSPSRRRRVASGSGFLERDVSKLIKDFTRMRSLMQ 427
>gi|427716938|ref|YP_007064932.1| signal recognition particle subunit FFH/SRP54 (srp54) [Calothrix
sp. PCC 7507]
gi|427349374|gb|AFY32098.1| signal recognition particle subunit FFH/SRP54 (srp54) [Calothrix
sp. PCC 7507]
Length = 485
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/344 (59%), Positives = 258/344 (75%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG E L A T++L+AGLQG GKTT +AKLA +L+K +SC+LVA DVYRPAAID
Sbjct: 86 MGEENVPLAEAAGETTIVLMAGLQGTGKTTATAKLALHLRKLERSCLLVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G++ P +IA+QG+E AK + ++ VI+DTAGRLQID+ MM EL
Sbjct: 146 QLITLGKQIDVPVFELGSDANPVEIARQGVERAKAEGINTVIIDTAGRLQIDEDMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E LLVVD+MTGQEAA L TF+ +IGITGAILTK+DGDSRGGAALSV+++S
Sbjct: 206 RIKETVQPHETLLVVDSMTGQEAANLTRTFHDQIGITGAILTKMDGDSRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQ+KI+SA
Sbjct: 266 GAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDLADAEKMQEKILSA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQ R + MGS+ +I MIPGM K++ Q+++ E LK EAMI +MT +ER
Sbjct: 326 KFDFTDFLKQLRMLKNMGSLGGLIKMIPGMNKLSDDQLKQGETQLKRCEAMINSMTRQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P+LLA SP RR+R+A SG E VS+LVA +MR M+ +
Sbjct: 386 HDPDLLASSPSRRRRIASGSGYRESDVSKLVADFQKMRSLMQQM 429
>gi|411120536|ref|ZP_11392908.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Oscillatoriales cyanobacterium JSC-12]
gi|410709205|gb|EKQ66720.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Oscillatoriales cyanobacterium JSC-12]
Length = 487
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/353 (58%), Positives = 268/353 (75%), Gaps = 4/353 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S L + PT++L+AGLQG GKTT +AKLA +L+K+ +S MLVA DVYRPAAID
Sbjct: 86 MGETNSPLAEVEPAPTIVLMAGLQGTGKTTATAKLALHLRKENRSTMLVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G + P +IA+QG+E+AK ++ VI+DTAGRLQID+ MM EL
Sbjct: 146 QLITLGKQIDVPVFELGKDANPVEIARQGVEKAKADGINTVIIDTAGRLQIDQDMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P EVLLVVDAMTGQEAA L TF+ +IGITGAILTK+DGD+RGGAALSV+++S
Sbjct: 206 QIKEAVQPHEVLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDTRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK +G GE++E L+PFYPDRMA RILGMGDVL+ VEKA+E + +AE+MQ+KI+SA
Sbjct: 266 GQPIKFIGTGEKVEALQPFYPDRMASRILGMGDVLTLVEKAREEVDLVEAEKMQEKILSA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQTR + MGS+ ++ +IPGM KI+ Q+ + E LK E+MI +MTPEER
Sbjct: 326 KFDFTDFLKQTRLLKTMGSLGGIMKLIPGMNKISSDQLEKGESELKKAESMINSMTPEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 353
+ P+LLA SP RR+R+A+ SG E VS LV + FQ +M+N+M +M G
Sbjct: 386 KNPDLLASSPSRRRRIARGSGYREADVSDLVNK-FQ---KMRNMMQMMGKGQF 434
>gi|17229444|ref|NP_485992.1| signal recognition particle protein [Nostoc sp. PCC 7120]
gi|17131042|dbj|BAB73651.1| signal recognition particle protein [Nostoc sp. PCC 7120]
Length = 490
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/344 (58%), Positives = 261/344 (75%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG E L + +PT++L+AGLQG GKTT +AKLA +L+K +SC+LVA DVYRPAAID
Sbjct: 86 MGEENVPLAEVEQKPTIVLMAGLQGTGKTTATAKLALHLRKLERSCLLVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G++ P +IA+QG+E AK + V+ VI+DTAGRLQID+ MM EL
Sbjct: 146 QLLTLGKQIDVPVFELGSDADPVEIARQGVERAKAEGVNTVIIDTAGRLQIDEDMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E LLVVD+MTGQEAA L TF+ +IGITGAILTK+DGDSRGGAALSV+++S
Sbjct: 206 RIKETVQPHETLLVVDSMTGQEAANLTRTFHEQIGITGAILTKMDGDSRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQ+KI+SA
Sbjct: 266 GAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDLADAEKMQEKILSA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DF+KQ R + MGS+ ++ MIPGMGK++ Q+++ E LK EAMI +MT +ER
Sbjct: 326 KFDFTDFVKQLRMLKNMGSLGGLLKMIPGMGKLSDDQLKQGETQLKRCEAMINSMTMQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P+LLA SP RR+R+A SG E V++LVA +MR M+ +
Sbjct: 386 RDPDLLASSPNRRRRIASGSGYKEADVNKLVADFQKMRSLMQQM 429
>gi|186683137|ref|YP_001866333.1| signal recognition particle protein [Nostoc punctiforme PCC 73102]
gi|186465589|gb|ACC81390.1| signal recognition particle protein [Nostoc punctiforme PCC 73102]
Length = 488
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/344 (58%), Positives = 259/344 (75%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG E + A+ +PT++L+AGLQG GKTT +AKLA +L+K +SC+LVA DVYRPAAID
Sbjct: 86 MGEENVPIAEAQEKPTIVLMAGLQGTGKTTATAKLALHLRKLDRSCLLVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G++ P +IA+QG+E A+ + V+ VI+DTAGRLQID+ MM EL
Sbjct: 146 QLLTLGKQIDVPVFELGSDADPVEIARQGVERARAEGVNTVIIDTAGRLQIDEDMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGDSRGGAALSV+++S
Sbjct: 206 RIKATVQPHETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDSRGGAALSVRKIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQ+KI+SA
Sbjct: 266 GAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDLADAEKMQEKILSA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQ R + MGS+ I MIPGM K++ Q+++ E LK EAMI +MT +ER
Sbjct: 326 KFDFTDFLKQLRMLKNMGSLGGFIKMIPGMNKLSDDQLKQGETQLKRCEAMINSMTRQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P+LLA SP RR+R+A SG E V++LV +MR M+ +
Sbjct: 386 HDPDLLASSPSRRRRIAAGSGYRESDVTKLVGDFQKMRSLMQQM 429
>gi|75910555|ref|YP_324851.1| signal recognition particle subunit FFH/SRP54 (srp54) [Anabaena
variabilis ATCC 29413]
gi|75704280|gb|ABA23956.1| signal recognition particle subunit FFH/SRP54 (srp54) [Anabaena
variabilis ATCC 29413]
Length = 490
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/344 (58%), Positives = 261/344 (75%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG E L + +PT++L+AGLQG GKTT +AKLA +L+K +SC+LVA DVYRPAAID
Sbjct: 86 MGEENVPLAEVEQKPTIVLMAGLQGTGKTTATAKLALHLRKLERSCLLVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G++ P +IA+QG+E AK + V+ VI+DTAGRLQID+ MM EL
Sbjct: 146 QLLTLGKQIDVPVFELGSDADPVEIARQGVERAKAEGVNTVIIDTAGRLQIDEDMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E LLVVD+MTGQEAA L TF+ +IGITGAILTK+DGDSRGGAALSV+++S
Sbjct: 206 RIKETVQPHETLLVVDSMTGQEAANLTRTFHEQIGITGAILTKMDGDSRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQ+KI+SA
Sbjct: 266 GAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDLADAEKMQEKILSA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DF+KQ R + MGS+ ++ MIPGMGK++ Q+++ E LK EAMI +MT +ER
Sbjct: 326 KFDFTDFVKQLRMLKNMGSLGGLLKMIPGMGKLSDDQLKQGETQLKRCEAMINSMTIQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P+LLA SP RR+R+A SG E V++LVA +MR M+ +
Sbjct: 386 RDPDLLASSPNRRRRIASGSGYKEADVNKLVADFQKMRSLMQQM 429
>gi|16330898|ref|NP_441626.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
gi|383322640|ref|YP_005383493.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325809|ref|YP_005386662.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491693|ref|YP_005409369.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436960|ref|YP_005651684.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
gi|451815056|ref|YP_007451508.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
gi|2500885|sp|P74214.1|SRP54_SYNY3 RecName: Full=Signal recognition particle protein; AltName:
Full=Fifty-four homolog
gi|1653392|dbj|BAA18306.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
gi|339273992|dbj|BAK50479.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
gi|359271959|dbj|BAL29478.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275129|dbj|BAL32647.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278299|dbj|BAL35816.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407961740|dbj|BAM54980.1| signal recognition particle protein [Bacillus subtilis BEST7613]
gi|451781025|gb|AGF51994.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
Length = 482
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/338 (58%), Positives = 259/338 (76%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A+ PTVIL+AGLQG GKTT +AKLA YL+KQ +S ++VA DVYRPAAID
Sbjct: 86 MGESNVPLAQAEQAPTVILMAGLQGTGKTTATAKLALYLRKQKRSALMVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LG+Q+ VPV+ G++ P +IA+QG+E+AK+ VD V++DTAGRLQID MM EL
Sbjct: 146 QLKTLGQQIDVPVFDLGSDANPVEIARQGVEKAKELGVDTVLIDTAGRLQIDPQMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K+V+ P + LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGD+RGGAALSV+++S
Sbjct: 206 EIKQVVKPDDTLLVVDAMTGQEAANLTHTFHEQIGITGAILTKLDGDTRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E L+PFYPDR+A RIL MGDVL+ VEKAQE + D E++Q KI+ A
Sbjct: 266 GQPIKFVGVGEKVEALQPFYPDRLASRILNMGDVLTLVEKAQEAIDVGDVEKLQNKILEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF+DF+KQ R + MGS+ ++ MIPGM K++ + + EK LK EAMI +MT EER
Sbjct: 326 TFDFDDFIKQMRFMKNMGSLGGLLKMIPGMNKLSSGDIEKGEKELKRTEAMISSMTTEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 338
+ P+LLA+SP RR+R+AQ SG +E VS+L+ +MR
Sbjct: 386 KNPDLLAKSPSRRRRIAQGSGHSETDVSKLITNFTKMR 423
>gi|218441087|ref|YP_002379416.1| signal recognition particle protein [Cyanothece sp. PCC 7424]
gi|218173815|gb|ACK72548.1| signal recognition particle protein [Cyanothece sp. PCC 7424]
Length = 488
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/344 (58%), Positives = 259/344 (75%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A + PTVIL+AGLQG GKTT +AKLA +L+K+ ++C++VA DVYRPAAID
Sbjct: 86 MGESNIPLAKASTPPTVILMAGLQGTGKTTATAKLALFLRKEKRTCLMVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ GT+ P +IA+ G+E+AK+ VD VI+DTAGRLQID+ MM EL
Sbjct: 146 QLITLGQQIEVPVFEMGTDADPVEIARLGVEKAKELGVDTVIIDTAGRLQIDQDMMGELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P + LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGD+RGGAALSV++VS
Sbjct: 206 RIKATVKPDDTLLVVDAMTGQEAATLTHTFHEQIGITGAILTKLDGDTRGGAALSVRQVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E L+PFYP+RMA RIL MGDVL+ VEKAQE + D E+MQ KI+ A
Sbjct: 266 GQPIKFVGVGEKVEALQPFYPERMASRILNMGDVLTLVEKAQEELDLSDVEKMQSKILQA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ R + MGS+ ++ +IPGMGK++ + + + E LK E+MI +MT EER
Sbjct: 326 QFDFNDFLKQMRLLKNMGSLGGLLKLIPGMGKLSGSDIAKGETELKRTESMINSMTKEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P+LLA SP RR+R+A+ SG +E VS L+ +MR MK +
Sbjct: 386 ANPDLLASSPGRRRRIAKGSGHSESDVSNLIKNFTRMRAMMKQM 429
>gi|428200946|ref|YP_007079535.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pleurocapsa
sp. PCC 7327]
gi|427978378|gb|AFY75978.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pleurocapsa
sp. PCC 7327]
Length = 486
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/344 (58%), Positives = 257/344 (74%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A PTVIL+AGLQG GKTT +AKLA YL+KQ ++C++VA DVYRPAAID
Sbjct: 86 MGESNVPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQNQTCLMVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G++ P +IA+ G+E AK+ +D V++DTAGRLQID+ MM EL
Sbjct: 146 QLITLGQQIDVPVFEMGSDADPVEIARAGVERAKEMGIDTVLIDTAGRLQIDRDMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K +NP + LLVVDAMTGQEAA L TF +IGITGAILTKLDGD+RGGAALSV++VS
Sbjct: 206 RIKATVNPHDTLLVVDAMTGQEAANLTRTFQEQIGITGAILTKLDGDTRGGAALSVRQVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E L+PFYPDRMA RIL MGDVL+ VEKAQE + D E+MQ KI+ A
Sbjct: 266 GQPIKFVGVGEKVEALQPFYPDRMASRILNMGDVLTLVEKAQEQIDIADVEKMQSKILEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ R + MGS+ ++ MIPG K++ + + + E LK EAMI +MT EER
Sbjct: 326 KFDFNDFLKQMRLLKNMGSLGGLLKMIPGFNKLSGSDIEKGETELKRTEAMINSMTTEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P+LLA+SP RR+R+A+ SG E V++LV+ +MR M+ +
Sbjct: 386 ANPDLLAKSPNRRRRIARGSGYEESDVTKLVSNFTRMRNMMQQM 429
>gi|119488999|ref|ZP_01621934.1| Signal recognition particle protein [Lyngbya sp. PCC 8106]
gi|119454955|gb|EAW36098.1| Signal recognition particle protein [Lyngbya sp. PCC 8106]
Length = 480
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/344 (58%), Positives = 259/344 (75%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A S PT++L+AGLQG GKTT +AKLA +L+K+ ++ ++VA DVYRPAAID
Sbjct: 86 MGESNVPLATADSPPTIVLMAGLQGTGKTTATAKLALHLRKENRTALMVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LG+Q+ VPV+ G++ P +IA+QG+E AK + VD VI+DTAGRLQID+ MM EL
Sbjct: 146 QLKTLGQQIEVPVFELGSDADPVEIARQGVEYAKTQGVDTVIIDTAGRLQIDQDMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K V+ P + LLVVDAMTGQEAA L TFN +IGI+GAILTKLDGDSRGGAALS++ +S
Sbjct: 206 RIKAVVQPHDTLLVVDAMTGQEAATLTQTFNEQIGISGAILTKLDGDSRGGAALSIRRIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE++E L+PFYP+RMA RILGMGDVL+ VEKAQE DAE+MQ+KIM A
Sbjct: 266 GAPIKFVGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEFDLADAEKMQQKIMEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQTR + MGS+ + +IPGM KI+ Q+ + E+ LK EAMI +MT EER
Sbjct: 326 KFDFTDFLKQTRLMKNMGSLGGLAKLIPGMNKISKEQLEQGEQQLKRSEAMINSMTTEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+ PE+LA SP RR+R+A+ SG +E+ V +LV +MR M+ +
Sbjct: 386 KNPEVLASSPSRRRRIAKGSGHSEKDVMRLVGDFQKMRGMMQQM 429
>gi|428770653|ref|YP_007162443.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cyanobacterium aponinum PCC 10605]
gi|428684932|gb|AFZ54399.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cyanobacterium aponinum PCC 10605]
Length = 480
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/334 (60%), Positives = 250/334 (74%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG + L A P V+L+AGLQG GKTT +AKLA YL+KQ +SC++VA DVYRPAAI
Sbjct: 86 MGESNAPLAEADKPPRVVLMAGLQGAGKTTATAKLALYLQKQKRSCLMVATDVYRPAAIQ 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG Q+ VPV+ GT P IA+QGLEEAK K +D VI+DTAGRLQID+ MM EL
Sbjct: 146 QLITLGTQISVPVFELGTGANPVDIARQGLEEAKNKGIDTVIIDTAGRLQIDQEMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
VK +NP EVLLVVD+MTGQEAA + +F+ EIGITGAILTK+DGDSRGGAALS++ +S
Sbjct: 206 QVKDAVNPDEVLLVVDSMTGQEAANVTRSFHEEIGITGAILTKMDGDSRGGAALSIRTIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK +G GE++E LEPFYPDRMA RIL MGD+++ VEKAQE + D E+MQKK+M A
Sbjct: 266 GQPIKFIGVGEKVEALEPFYPDRMASRILNMGDIVTLVEKAQEELDIADVEKMQKKMMEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ R + MGS + V+ +IPGM K+ + + E LK E MI +MT EER
Sbjct: 326 KFDFNDFLKQMRLLKNMGSFAGVMKLIPGMNKLGAGALEQGEVQLKRTETMINSMTKEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
P+LLA+SP RR+RVA+ SG E+ VS+LV+
Sbjct: 386 ANPQLLAQSPSRRRRVAKGSGHQEKDVSRLVSDF 419
>gi|427733956|ref|YP_007053500.1| signal recognition particle subunit FFH/SRP54 (srp54) [Rivularia
sp. PCC 7116]
gi|427368997|gb|AFY52953.1| signal recognition particle subunit FFH/SRP54 (srp54) [Rivularia
sp. PCC 7116]
Length = 481
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/344 (57%), Positives = 259/344 (75%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG LV A+ PT++L+AGLQG GKTT +AKLA +L+K ++C++VA DVYRPAAID
Sbjct: 86 MGETNVPLVQAEESPTIVLMAGLQGTGKTTATAKLALHLRKLERNCLMVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G++ P +IA+QG+E AK + +D VI+DTAGRLQID+ MM EL
Sbjct: 146 QLITLGKQIDVPVFELGSDANPVEIARQGVERAKAEGIDTVIIDTAGRLQIDEDMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
VK + P E LLVVDAMTGQEAA L TF+ +IGI+GAILTKLDGDSRGGAALSV+ +S
Sbjct: 206 SVKETVQPHETLLVVDAMTGQEAANLTRTFHEKIGISGAILTKLDGDSRGGAALSVRRIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+M +K++SA
Sbjct: 266 GAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDLADAEKMTEKMLSA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQ R + MGS+ ++ MIPGM KI+ Q+ + + L+ EAMI++MT +ER
Sbjct: 326 KFDFTDFLKQLRLLKNMGSLGGIMKMIPGMNKISNEQLEQGQSQLQRCEAMIKSMTKQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P+LLA SP RR+R+A SG E+ VS+L++ +MR M+ +
Sbjct: 386 TDPDLLASSPSRRRRIASGSGYKEKDVSKLISDFQKMRNMMQQM 429
>gi|126658775|ref|ZP_01729919.1| signal recognition particle protein [Cyanothece sp. CCY0110]
gi|126619873|gb|EAZ90598.1| signal recognition particle protein [Cyanothece sp. CCY0110]
Length = 488
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/331 (59%), Positives = 253/331 (76%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A++ PTVIL+AGLQG GKTT +AKLA YL+KQ +S ++VA D+YRPAAID
Sbjct: 86 MGESNVPLAQAENAPTVILMAGLQGTGKTTATAKLALYLRKQQRSALMVATDIYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LGEQ+ VPV+ G + P IA QG+E+AK+ +D VI+DTAGRLQID+ MM EL
Sbjct: 146 QLITLGEQIDVPVFELGNQANPVDIATQGVEKAKEMGIDTVIIDTAGRLQIDEEMMLELS 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
VK+ +NP + LLVVDAMTGQEAA L TF+ +IG+TGAILTK+DGD+RGGAALSV+++S
Sbjct: 206 RVKKAVNPDDTLLVVDAMTGQEAANLTRTFHDQIGVTGAILTKMDGDTRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E L+PFYPDRMA RIL MGDVL+ VEKAQE + D E+MQ KI+ A
Sbjct: 266 GQPIKFVGVGEKVEALQPFYPDRMASRILSMGDVLTLVEKAQEEIDLSDVEQMQSKILEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ R + MGS ++ MIPGM K++ + + E LK EAMI +MT EER
Sbjct: 326 KFDFNDFLKQMRLMKNMGSFGSILKMIPGMNKLSTKDIEKGEGELKRTEAMISSMTLEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLV 331
+ P+LLA+SP RR+R+A+ SG E +VS+L+
Sbjct: 386 KNPDLLAKSPNRRRRIAKGSGHPETEVSKLI 416
>gi|428226672|ref|YP_007110769.1| signal recognition particle subunit FFH/SRP54 (srp54) [Geitlerinema
sp. PCC 7407]
gi|427986573|gb|AFY67717.1| signal recognition particle subunit FFH/SRP54 (srp54) [Geitlerinema
sp. PCC 7407]
Length = 482
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 259/344 (75%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG + L + P V+L+AGLQG GKTT +AKLA YL+K+ + ++VA DVYRPAA+D
Sbjct: 86 MGSANAPLASPDTPPAVVLMAGLQGTGKTTATAKLALYLRKENRKALMVATDVYRPAAVD 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ GT+ P +IA++G+E ++ VDVV++DTAGRLQID++MM EL
Sbjct: 146 QLITLGKQIDVPVFEMGTQANPVEIARRGVERGRELGVDVVLIDTAGRLQIDQSMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGD+RGGAALSV+ +S
Sbjct: 206 QIKETVQPHETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDARGGAALSVRRIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQ+KI+ A
Sbjct: 266 GQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDLADAEKMQEKILEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ R + MGS+ VI +IPG+ KI+ Q+ + E LK E+MI +MT ER
Sbjct: 326 KFDFNDFLKQMRFLKNMGSLGSVIKLIPGLNKISSEQLEQGESQLKRAESMISSMTKAER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P+LL+ SP RR+RVA+ SG +E+ VS+LV+ +MR M+ +
Sbjct: 386 RNPDLLSSSPSRRQRVAKGSGHSERDVSKLVSDFQRMRAMMQQM 429
>gi|172038385|ref|YP_001804886.1| signal recognition particle protein [Cyanothece sp. ATCC 51142]
gi|354554267|ref|ZP_08973572.1| signal recognition particle protein [Cyanothece sp. ATCC 51472]
gi|171699839|gb|ACB52820.1| signal recognition particle protein [Cyanothece sp. ATCC 51142]
gi|353553946|gb|EHC23337.1| signal recognition particle protein [Cyanothece sp. ATCC 51472]
Length = 489
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/331 (59%), Positives = 253/331 (76%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A++ PTVIL+AGLQG GKTT +AKLA YL+KQ ++ ++VA D+YRPAAID
Sbjct: 86 MGESNVPLAQAENAPTVILMAGLQGTGKTTATAKLALYLRKQQRTALMVATDIYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLV LGEQ+ VPV+ G + P IA QG+E+AK+ +D VI+DTAGRLQID+ MM EL
Sbjct: 146 QLVTLGEQIEVPVFELGNQANPVDIATQGVEKAKEMGIDTVIIDTAGRLQIDEEMMLELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
VK+ +NP + LLVVDAMTGQEAA L TF+ +IG+TGAILTK+DGD+RGGAALSV+++S
Sbjct: 206 RVKKAVNPDDTLLVVDAMTGQEAANLTRTFHDQIGVTGAILTKMDGDTRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E L+PFYPDRMA RIL MGDVL+ VEKAQE + D E+MQ KI+ A
Sbjct: 266 GQPIKFVGVGEKVEALQPFYPDRMASRILSMGDVLTLVEKAQEEIDLSDVEQMQSKILEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ R + MGS ++ MIPGM K++ + + E LK EAMI +MT EER
Sbjct: 326 KFDFNDFLKQMRLMKNMGSFGSILKMIPGMNKLSTKDIEKGEGELKRTEAMISSMTLEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLV 331
+ P++LA+SP RR+R+AQ SG E +VS+L+
Sbjct: 386 KNPDILAKSPSRRRRIAQGSGHPEAEVSKLI 416
>gi|428219543|ref|YP_007104008.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Pseudanabaena sp. PCC 7367]
gi|427991325|gb|AFY71580.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Pseudanabaena sp. PCC 7367]
Length = 472
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/352 (59%), Positives = 271/352 (76%), Gaps = 5/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG + L +++ PT+IL+AGLQG GKTT SAKLA L+KQ +S +LVA DVYRPAAID
Sbjct: 86 MGTDNQPLAQSENSPTIILMAGLQGTGKTTASAKLALQLRKQERSALLVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ GT+ P +IAKQG+ +A+ + +D VIVDTAGRLQID+ MM EL
Sbjct: 146 QLITLGKQINVPVFQLGTDANPVEIAKQGVAQAQAEGIDTVIVDTAGRLQIDQDMMAELS 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K ++P EVLLVVDAMTGQEAA L TF+ +IGITGAILTKLDGD+RGGAALSV+E+S
Sbjct: 206 QIKGAIDPDEVLLVVDAMTGQEAANLTQTFHDQIGITGAILTKLDGDTRGGAALSVREIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E L+PFYP+RMA RILGMGDVL+ VEKAQE + DAE++Q+KI+ A
Sbjct: 266 GQPIKFVGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEIDIADAEKLQEKILEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF+DFLKQTR + MGS ++ +IPGM KI+ Q+ +AE LK +E+MI +MT +ER
Sbjct: 326 RFDFDDFLKQTRMMKNMGSFGGIMKLIPGM-KISDDQLNQAETQLKRVESMISSMTKQER 384
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 352
+ P+LLA SP R++RVA+ +G Q V++LV+ FQ RM+ LM M G+
Sbjct: 385 KDPDLLARSPGRKQRVAKGAGYKTQDVTKLVSD-FQ---RMRGLMQQMGQGN 432
>gi|443478735|ref|ZP_21068451.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Pseudanabaena biceps PCC 7429]
gi|443015940|gb|ELS30714.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Pseudanabaena biceps PCC 7429]
Length = 477
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/354 (58%), Positives = 269/354 (75%), Gaps = 5/354 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A + PTVIL+AGLQG GKTT +AKLA +L+K ++ +LVA DVYRPAAID
Sbjct: 86 MGEANVPLAEANNAPTVILMAGLQGTGKTTATAKLALHLRKLDRTALLVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G + P +IA+QGL +AK+ V+ VI+DTAGRLQID+ MMDELK
Sbjct: 146 QLITLGKQINVPVFEMGADADPVEIARQGLAKAKELGVNTVIIDTAGRLQIDRDMMDELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
VK + P EVLLVVDAMTGQEAA L TF+ EIGITGAILTK+DGD+RGGAALSV+++S
Sbjct: 206 RVKDTIKPDEVLLVVDAMTGQEAATLTRTFHDEIGITGAILTKMDGDTRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK +G GE++E L+PFYP+RMA RILGMGDVL+ VEKAQE + DA +Q+KI+ A
Sbjct: 266 GQPIKFIGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEIDFTDAANLQEKILKA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF+DFLK TR + MGS ++ M+PGM KI AQ++EAEK LK E+MI +MT +ER
Sbjct: 326 QFDFDDFLKNTRMMKNMGSFGGMLKMLPGM-KINDAQIQEAEKQLKRCESMISSMTKQER 384
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 354
+ P+L+A+SP R++R+A +G Q V++LVA FQ +M++LM M G +P
Sbjct: 385 KDPDLIAKSPSRKQRIANGAGYKLQDVTKLVAD-FQ---KMRSLMQQMGQGKMP 434
>gi|67924644|ref|ZP_00518055.1| Signal recognition particle protein [Crocosphaera watsonii WH 8501]
gi|416379090|ref|ZP_11683820.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Crocosphaera watsonii WH 0003]
gi|67853517|gb|EAM48865.1| Signal recognition particle protein [Crocosphaera watsonii WH 8501]
gi|357265970|gb|EHJ14666.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Crocosphaera watsonii WH 0003]
Length = 488
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/331 (59%), Positives = 252/331 (76%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A+ PTVIL+AGLQG GKTT +AKL+ YL+KQ ++C++VA D+YRPAAID
Sbjct: 86 MGESNVPLAQAEKSPTVILMAGLQGTGKTTATAKLSLYLRKQERTCLMVATDIYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LGEQ+ VPV+ GT+ P IA QG+ +AK+ +D VI+DTAGRLQID+ MM EL
Sbjct: 146 QLKTLGEQIEVPVFELGTQANPVDIATQGVAKAKEMGIDTVIIDTAGRLQIDEEMMLELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
VK+ +NP + LLVVDAMTGQEAA L TF+ +IG+TGAILTK+DGD+RGGAALSV+++S
Sbjct: 206 RVKKAVNPDDTLLVVDAMTGQEAANLTRTFHEQIGVTGAILTKMDGDTRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E L+PFYPDRMA RIL MGDVL+ VEKAQE + D E+MQ KI+ A
Sbjct: 266 GQPIKFVGVGEKVEALQPFYPDRMASRILSMGDVLTLVEKAQEEIDLSDVEQMQSKILEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ R + MGS ++ MIPGM K++ + + E LK EAMI +MT EER
Sbjct: 326 KFDFNDFLKQMRLMKNMGSFGSILKMIPGMNKLSSTDIEKGEGELKRTEAMISSMTLEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLV 331
+ P+LLA+SP RR+R+A+ SG E +VS+L+
Sbjct: 386 KNPDLLAKSPNRRRRIAKGSGHPEAEVSKLI 416
>gi|423062554|ref|ZP_17051344.1| signal recognition particle subunit SRP54 [Arthrospira platensis
C1]
gi|406715889|gb|EKD11041.1| signal recognition particle subunit SRP54 [Arthrospira platensis
C1]
Length = 471
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/344 (58%), Positives = 255/344 (74%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A+ PT++L+AGLQG GKTT SAKLA +L+K+ +S +LVA DVYRPAAID
Sbjct: 86 MGESNVPLAEAQQPPTIVLMAGLQGTGKTTASAKLALHLQKENRSSLLVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G + P +IA+QG+E K + +D +I+DTAGRLQID+ MM EL
Sbjct: 146 QLMTLGKQINVPVFELGKDADPVEIARQGIEYGKAQGIDTIIIDTAGRLQIDQNMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E LLVVDAMTGQEAA L TFN IGITGAILTK+DGDSRGGAALS++ VS
Sbjct: 206 QIKETVQPHETLLVVDAMTGQEAATLTQTFNDRIGITGAILTKMDGDSRGGAALSIRRVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE++E L+PFYP+RMA RILGMGD+L+ VEKAQE DAE+MQ+KI+ A
Sbjct: 266 GAPIKFVGVGEKVEALQPFYPERMASRILGMGDILTLVEKAQEEFDIADAEKMQEKILEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQTR + MGS+ ++ +IPGM KI+ Q+ E LK EAMI +MT EER
Sbjct: 326 KFDFTDFLKQTRLMKNMGSLGGLVKLIPGMNKISQEQLDAGESQLKRSEAMINSMTIEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+ PELL+ SP RRKRVA+ +G E+ V +LV+ +MR M+ +
Sbjct: 386 KNPELLSNSPSRRKRVAKGAGYAEKDVMRLVSDFQRMRSLMQQM 429
>gi|298490416|ref|YP_003720593.1| signal recognition particle protein ['Nostoc azollae' 0708]
gi|298232334|gb|ADI63470.1| signal recognition particle protein ['Nostoc azollae' 0708]
Length = 485
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 260/344 (75%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG E L + + T++L+AGLQG GKTT +AKLA +L+K +SC+LVA DVYRPAAI+
Sbjct: 86 MGEENIPLAEVEGKTTIVLMAGLQGTGKTTATAKLALHLRKLNRSCLLVATDVYRPAAIE 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G++ P +IA+QG+E A+ + ++ VIVDTAGRLQID+ MM EL
Sbjct: 146 QLLTLGKQIDVPVFELGSDADPVEIARQGVEHARAEGINTVIVDTAGRLQIDQDMMAELS 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E LLVVD+MTGQEAA L TF+ +IGITGAILTKLDGDSRGGAALSV+++S
Sbjct: 206 RIKSTIEPDETLLVVDSMTGQEAANLTRTFHDQIGITGAILTKLDGDSRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE++E L+PFYP+RMA RILGMGDVL+ VEKAQE + DAE+MQ+KI+SA
Sbjct: 266 GAPIKFVGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEIDLADAEQMQEKILSA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQ R + MGS+ ++ +IPGMGK++ Q+++ E LK EAMI +MT +ER
Sbjct: 326 KFDFTDFLKQLRLMKNMGSLGGIMKLIPGMGKLSDDQLKQGETQLKRCEAMINSMTKQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P+LLA SP RR+R+A +G E VS+LV +MR M+ +
Sbjct: 386 RNPDLLASSPSRRRRIASGAGYRESDVSKLVGDFQKMRSLMQQM 429
>gi|428212117|ref|YP_007085261.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oscillatoria
acuminata PCC 6304]
gi|428000498|gb|AFY81341.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oscillatoria
acuminata PCC 6304]
Length = 476
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/334 (60%), Positives = 252/334 (75%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A++ PTV+L+AGLQG GKTT +AKLA +L+KQ ++ +LVA D+YRPAAID
Sbjct: 86 MGESNVPLAQAETAPTVVLMAGLQGTGKTTATAKLALHLRKQNRTTLLVATDIYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ GT+ P +IA+QG++ A VD VIVDTAGRLQID MM EL
Sbjct: 146 QLLTLGKQIDVPVFELGTDADPVEIARQGIQHAVAIGVDTVIVDTAGRLQIDADMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E LLVVDAMTGQEAA L TFN EIGITGAILTKLDGD+RGGAALSV+++S
Sbjct: 206 QIKETIQPHETLLVVDAMTGQEAANLTRTFNDEIGITGAILTKLDGDTRGGAALSVRQLS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VE+A E + DAE+MQ+KI+ A
Sbjct: 266 GQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVERAAEQVDLADAEKMQQKILQA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ R + MGS+ ++ MIPG+GKI+ Q+ + E LK EAMI +MT +ER
Sbjct: 326 QFDFNDFLKQMRLMKNMGSLGGLLKMIPGVGKISDDQLSKGESQLKSAEAMINSMTAQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
P+LLA SP RRKRVA+ SG + V++LV
Sbjct: 386 VNPDLLAGSPSRRKRVARGSGHDDAAVTKLVTDF 419
>gi|170078230|ref|YP_001734868.1| signal recognition particle protein [Synechococcus sp. PCC 7002]
gi|169885899|gb|ACA99612.1| signal recognition particle protein [Synechococcus sp. PCC 7002]
Length = 478
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/339 (58%), Positives = 260/339 (76%), Gaps = 1/339 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A+++P+VIL+AGLQG GKTT +AKL+ YL+KQ K+ ++VA DVYRPAAID
Sbjct: 86 MGESNVPLAEAENKPSVILMAGLQGTGKTTATAKLSLYLRKQNKTALMVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LGEQ+ VPV+ G++ P IAKQG+E+AK+ VDVV+VDTAGRLQID MM ELK
Sbjct: 146 QLKTLGEQIDVPVFDLGSDANPVDIAKQGVEKAKELGVDVVLVDTAGRLQIDADMMAELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K +NP + LLVVD+MTGQEAA+L TF+ EIG+TGAILTK+DGD+RGGAALSV+ +S
Sbjct: 206 QIKESINPDDTLLVVDSMTGQEAASLTRTFHEEIGVTGAILTKMDGDTRGGAALSVRMIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK +G GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + D EEMQ K++ A
Sbjct: 266 GQPIKFIGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEAVDLSDVEEMQAKLLEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDF+DFLKQ R + MGS+ ++ +IPGMG KI + + E LK +E MI +MT EE
Sbjct: 326 RFDFDDFLKQMRLLKNMGSLGGMLKLIPGMGNKIDKNMLEQGEVQLKRVETMINSMTKEE 385
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 338
R+ P++LA++P RR R+A+ SG +E+ VS+L+A +MR
Sbjct: 386 RKNPDVLAQTPKRRTRIAKGSGLSEKDVSKLIADFTRMR 424
>gi|291567513|dbj|BAI89785.1| signal recognition particle protein [Arthrospira platensis NIES-39]
Length = 470
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/344 (58%), Positives = 255/344 (74%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A+ PT++L+AGLQG GKTT SAKLA +L+K+ +S +LVA DVYRPAAID
Sbjct: 86 MGESNVPLAEAQQPPTIVLMAGLQGTGKTTASAKLALHLQKENRSSLLVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G + P +IA+QG+E K + +D +I+DTAGRLQID+ MM EL
Sbjct: 146 QLMTLGKQINVPVFELGKDADPVEIARQGIEYGKAQGIDTIIIDTAGRLQIDQNMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E LLVVDAMTGQEAA L TFN IGITGAILTK+DGDSRGGAALS++ VS
Sbjct: 206 QIKETVQPHETLLVVDAMTGQEAATLTQTFNDRIGITGAILTKMDGDSRGGAALSIRRVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE++E L+PFYP+RMA RILGMGD+L+ VEKA+E DAE+MQ+KI+ A
Sbjct: 266 GAPIKFVGVGEKVEALQPFYPERMASRILGMGDILTLVEKAEEEFDIADAEKMQEKILEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQTR + MGS+ ++ +IPGM KI+ Q+ E LK EAMI +MT EER
Sbjct: 326 KFDFTDFLKQTRLMKNMGSLGGLVKLIPGMNKISQEQLDAGESQLKRSEAMINSMTIEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+ PELL+ SP RRKRVA+ +G E+ V +LV+ +MR M+ +
Sbjct: 386 KNPELLSNSPSRRKRVAKGAGYAEKDVMRLVSDFQRMRSLMQQM 429
>gi|354565512|ref|ZP_08984687.1| signal recognition particle protein [Fischerella sp. JSC-11]
gi|353549471|gb|EHC18913.1| signal recognition particle protein [Fischerella sp. JSC-11]
Length = 486
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/344 (58%), Positives = 258/344 (75%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG LV A++ PT++L+AGLQG GKTT +AKLA +L+K ++C++VA DVYRPAAI+
Sbjct: 86 MGETNVPLVQAQNPPTIVLMAGLQGTGKTTATAKLALHLRKIDRTCLMVATDVYRPAAIE 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLV LG+Q+ VPV+ G++ P +IA+ G+E + + D VI+DTAGRLQID MM EL
Sbjct: 146 QLVTLGKQIDVPVFEMGSDADPVEIARLGVERGRAEKFDTVIIDTAGRLQIDADMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K V+ P E LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGDSRGGAALSV+ +S
Sbjct: 206 RIKEVVQPHETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKLDGDSRGGAALSVRRIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQ+KI++A
Sbjct: 266 GAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDLADAEKMQEKILAA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQ R + MGS+ ++ +IPGM K++ Q+++ E LK EAMI +MT EER
Sbjct: 326 KFDFTDFLKQLRLLKNMGSLGGILKLIPGMNKLSSDQLQQGETQLKRCEAMINSMTQEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+ P+LLA SP RR+R+A SG E VS+LV+ +MR M+ +
Sbjct: 386 KNPDLLASSPSRRRRIAGGSGYKEADVSKLVSDFQKMRSLMQQM 429
>gi|159903874|ref|YP_001551218.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9211]
gi|159889050|gb|ABX09264.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9211]
Length = 485
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 258/344 (75%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGE + L +PTVIL+AGLQG GKTT +AKLA +LK QG+ ++VA DVYRPAAI+
Sbjct: 86 MGGENAPLANVSEKPTVILMAGLQGAGKTTATAKLALHLKDQGRKALMVAADVYRPAAIE 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LG Q+ + V++ G+ +KP QIA GLE+A+ + D ++VDTAGRLQID MMDE+
Sbjct: 146 QLTTLGSQIDIDVFSLGSNLKPEQIAASGLEKARNEGFDTLLVDTAGRLQIDSEMMDEMV 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++ +NP EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+K++S
Sbjct: 206 RIRSAVNPDEVLLVVDSMIGQEAAELTRAFHEKVGITGAVLTKLDGDSRGGAALSIKKIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE++E LEPF+P+RMA RILGMGDVL+ VEKAQ+ ++ DAE+MQKK A
Sbjct: 266 GKPIKFIGTGEKVEALEPFHPERMASRILGMGDVLTLVEKAQKEVEIADAEQMQKKFQEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
+FDF+DF+KQ R + RMGS+ ++ MIPGM KI ++ E+ LK +EAMI +MTP ER
Sbjct: 326 SFDFSDFVKQMRLIKRMGSLGGLMKMIPGMNKIDDGMIKSGEEQLKRIEAMIGSMTPAER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+PELLA P RR+RVA SG T + +++A +MR MK +
Sbjct: 386 TQPELLAAQPSRRRRVALGSGHTPADMDKVLADFQKMRGFMKQM 429
>gi|22299516|ref|NP_682763.1| signal recognition particle protein [Thermosynechococcus elongatus
BP-1]
gi|22295699|dbj|BAC09525.1| signal recognition particle protein [Thermosynechococcus elongatus
BP-1]
Length = 469
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/344 (59%), Positives = 263/344 (76%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S L + PT+IL+AGLQG GKTT +AKLA +L+K+G+S +LVA DVYRPAAID
Sbjct: 86 MGESHSPLAHVEPPPTIILMAGLQGTGKTTATAKLALHLRKEGRSTLLVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+GVPV+ GTEV P +IA+QG+ +AK+ VD VI+DTAGRLQID MM EL
Sbjct: 146 QLMTLGKQIGVPVFEMGTEVSPVEIARQGVAKAKELGVDTVIIDTAGRLQIDAEMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E LLVVDAMTGQEAA L F+ ++GITGAILTKLDGD+RGGAALSV++VS
Sbjct: 206 AIKEGVQPHETLLVVDAMTGQEAANLTRAFHEQVGITGAILTKLDGDTRGGAALSVRQVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK +G GE++E L+PFYPDR+A RILGMGDVL+ VEKAQE + DAE+M +KI+ A
Sbjct: 266 GQPIKFIGVGEKVEALQPFYPDRLASRILGMGDVLTLVEKAQEEVDLADAEKMSRKILEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF+DFLKQ R + MGS++ +I +IPGM KI+ Q+++ E+ LK EAMI +MT EER
Sbjct: 326 QFDFDDFLKQLRLLKNMGSLAGIIKLIPGMNKISTEQLQQGEQQLKRAEAMINSMTREER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
PELLA SP RR+RVA+ SG V++LV+ +MR M+ +
Sbjct: 386 RNPELLASSPSRRERVAKGSGYQVADVTKLVSDFQRMRSLMQQM 429
>gi|384245021|gb|EIE18517.1| signal recognition particle protein [Coccomyxa subellipsoidea
C-169]
Length = 489
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/362 (57%), Positives = 274/362 (75%), Gaps = 1/362 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG+ +L K P VIL+AGLQGVGKTT KLA L+K+ K ++VA DVYRPAAID
Sbjct: 86 MGGQQQDLNDPKDGPQVILMAGLQGVGKTTACGKLALALQKRNKRVLMVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLV LGE++ VPV+ GT+ KP++IA++GL +A+ ++ D +IVDTAGRLQID MM EL+
Sbjct: 146 QLVSLGERINVPVFEMGTDAKPAEIARRGLAKARAEDFDAIIVDTAGRLQIDANMMSELR 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+V+ + P++ LLVVDAMTGQEAA LV FN ITGAILTK+DGDSRGGAALSVK VS
Sbjct: 206 EVQATVQPSDTLLVVDAMTGQEAAGLVKAFNEAAEITGAILTKMDGDSRGGAALSVKAVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GE++E LEPFYPDR+A RILGMGDVL+ VEKA+ +++EDA E+ K+++SA
Sbjct: 266 GKPIKFVGTGEKLEALEPFYPDRIASRILGMGDVLTLVEKAEASIKEEDAAEITKRMLSA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFLKQ + V+ MGSM +++ M+PGM +IT Q+ EAEK K+ EA+I +MTPEER
Sbjct: 326 KFDFNDFLKQYKMVSGMGSMGQIMKMLPGMNQITEKQLNEAEKQFKMFEALINSMTPEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME-GGSLPALSNL 359
P+LLA++ RR+R+A+ +G+ E V+ ++ MR +M++L +M+ GG P + L
Sbjct: 386 TNPDLLAKTASRRRRIARGAGRIEVDVTNMIGTFGGMRAKMQSLSKMMKMGGGAPGMPQL 445
Query: 360 ED 361
D
Sbjct: 446 SD 447
>gi|443316813|ref|ZP_21046243.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leptolyngbya
sp. PCC 6406]
gi|442783601|gb|ELR93511.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leptolyngbya
sp. PCC 6406]
Length = 494
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/345 (60%), Positives = 268/345 (77%), Gaps = 1/345 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S L A S PTV+L+AGLQG GKTT +AKLA +L+K+ ++ +LVA DVYRPAA+D
Sbjct: 86 MGESNSPLAQADSGPTVVLMAGLQGTGKTTAAAKLALHLRKEKRTTLLVATDVYRPAAVD 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ GT+ P IA+QGLE+A++ +VD VIVDTAGRLQID AMM EL
Sbjct: 146 QLITLGKQIDVPVFDLGTDANPVDIARQGLEKARELDVDTVIVDTAGRLQIDPAMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K V+ P EVLLVVDAMTGQEAA L TF+ EIGITGAILTK+DGD+RGGAALSV+++S
Sbjct: 206 QIKAVIQPHEVLLVVDAMTGQEAANLTRTFHEEIGITGAILTKMDGDARGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK +G GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + D E++QKKI+ A
Sbjct: 266 GQPIKFIGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEAVDIADVEKLQKKIIEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDF+KQ R + MGS ++ +IPGM GKI+ Q+++ E LK +EAMI +MT E
Sbjct: 326 KFDFNDFIKQMRLMKTMGSFGGILKLIPGMAGKISDEQLQQGEVQLKRVEAMIGSMTKSE 385
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
R++PELL+ SP RR+R+AQ SG E+ VS+LV+ +MR M+ +
Sbjct: 386 RQQPELLSSSPSRRRRIAQGSGYQEKDVSKLVSDFQKMRSMMQQM 430
>gi|159478459|ref|XP_001697320.1| chloroplast SRP54 subunit of signal recognition particle
[Chlamydomonas reinhardtii]
gi|158274478|gb|EDP00260.1| chloroplast SRP54 subunit of signal recognition particle
[Chlamydomonas reinhardtii]
Length = 549
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/391 (53%), Positives = 278/391 (71%), Gaps = 17/391 (4%)
Query: 19 LLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGT 78
+ G +GVGKTT + KLA YLKK KSC+LVA DVYRPAAIDQLV LG + VPV+ GT
Sbjct: 169 CVHGARGVGKTTAAGKLALYLKKAKKSCLLVATDVYRPAAIDQLVKLGAAIDVPVFEMGT 228
Query: 79 EVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAM 138
+V P +IAK+G+EEA++ VD VI+DTAGRLQ+D+ MM EL+DVK + P++ LLVVDAM
Sbjct: 229 DVSPVEIAKKGVEEARRLGVDAVIIDTAGRLQVDEGMMAELRDVKSAVRPSDTLLVVDAM 288
Query: 139 TGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEP 198
TGQEAA LV +FN + I+GAILTK+DGDSRGGAALSV+EVSGKPIK VG GE+ME LEP
Sbjct: 289 TGQEAANLVRSFNEAVDISGAILTKMDGDSRGGAALSVREVSGKPIKFVGVGEKMEALEP 348
Query: 199 FYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMG 258
FYP+RMA RILGMGDVL+ EKA+ +++EDA++ +++M FDFNDFL Q + + MG
Sbjct: 349 FYPERMASRILGMGDVLTLYEKAEAAIKEEDAQKTMERLMEEKFDFNDFLNQWKAMNNMG 408
Query: 259 SMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQ 318
+ +++ M+PG KI+ Q+ EAEK + EA+I AM EER PE+L ++ RR+RVAQ
Sbjct: 409 GL-QMLKMMPGFNKISEKQLYEAEKQFGVYEAIIGAMDEEERSNPEVLIKNLARRRRVAQ 467
Query: 319 DSGKTEQQVSQLVAQLFQMRVR---MKNLMGVMEGGSLPALSN--LEDALKSE-QKAPPG 372
DSGK+E +V++L+A M+ + M L+ + + G+ P +N L++ + S +K PG
Sbjct: 468 DSGKSEAEVTKLMAAYTSMKAQVGGMSKLLKLQKAGADPQKANSLLQELVASAGKKVAPG 527
Query: 373 TARRKRRSESRRQFVDPASTRPSPRGFGGGS 403
RRK+ E P S RGFG S
Sbjct: 528 KVRRKKEKE-------PLS---KARGFGSSS 548
>gi|220909384|ref|YP_002484695.1| signal recognition particle protein [Cyanothece sp. PCC 7425]
gi|219865995|gb|ACL46334.1| signal recognition particle protein [Cyanothece sp. PCC 7425]
Length = 489
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/344 (58%), Positives = 264/344 (76%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG + L A++ PT++L+AGLQG GKTT +AKLA +L+KQ +S +LVA D+YRPAAID
Sbjct: 86 MGETNAPLAEAETAPTIVLMAGLQGTGKTTAAAKLALHLRKQNRSALLVATDIYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLV LG+Q+ VPV+ GTEV P +IA+QG+E + NVD VIVDTAGRLQID MM EL
Sbjct: 146 QLVTLGKQIDVPVFQLGTEVNPVEIARQGVEHGRSLNVDTVIVDTAGRLQIDPEMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGD+RGGAALSV+++S
Sbjct: 206 QIKTTIAPQETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDTRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK +G GE++E L+PFYPDR+A R+LGMGDVL+ VEKAQE + DAE++ +KI+ A
Sbjct: 266 GQPIKFIGVGEKVEALQPFYPDRLASRVLGMGDVLTLVEKAQEEVDLADAEKLSRKILEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQTR + MGS+ ++ +IPGM KI+ Q+++ E LK E+MI +MTP+ER
Sbjct: 326 KFDFTDFLKQTRLLKNMGSLGGIMKLIPGMNKISADQLQKGEDQLKRAESMINSMTPDER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
PELL+ SP RR+R+A+ SG + + VS+LV+ +MR M+ +
Sbjct: 386 RNPELLSSSPSRRRRIAKGSGHSLEDVSKLVSDFQKMRSLMQQM 429
>gi|2500884|sp|Q55311.1|SRP54_SYNE7 RecName: Full=Signal recognition particle protein; AltName:
Full=Fifty-four homolog
gi|1279743|emb|CAA63054.1| signal sequence binding protein [Synechococcus elongatus PCC 7942]
Length = 485
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/325 (60%), Positives = 253/325 (77%), Gaps = 1/325 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A PTVIL+AGLQG GKTT +AKLA +L+K+G+S +LVA DVYRPAAID
Sbjct: 86 MGETHVPLAQAAKAPTVILMAGLQGAGKTTATAKLALHLRKEGRSTLLVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G++ P +IA+QG+E+A+++ +D VIVDTAGRLQID MM+EL
Sbjct: 146 QLITLGKQIDVPVFELGSDANPVEIARQGVEKARQEGIDTVIVDTAGRLQIDTEMMEELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
VK + P EVLLVVD+M GQEAA+L +F+ IGITGAILTKLDGDSRGGAALS++ VS
Sbjct: 206 QVKEAIAPHEVLLVVDSMIGQEAASLTRSFHERIGITGAILTKLDGDSRGGAALSIRRVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E L+PF+P+RMA RILGMGDVL+ VEKAQE + D E+MQ+KI++A
Sbjct: 266 GQPIKFVGLGEKVEALQPFHPERMASRILGMGDVLTLVEKAQEEIDLADVEKMQEKILAA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDF DFLKQ R + MGS++ I +IPG+ GKI Q+R+ E+ LK +EAMI +MTP+E
Sbjct: 326 KFDFTDFLKQMRLLKNMGSLAGFIKLIPGLGGKINDEQLRQGERQLKRVEAMINSMTPQE 385
Query: 300 REKPELLAESPVRRKRVAQDSGKTE 324
R P+LL+ SP RR R+A+ G+TE
Sbjct: 386 RRDPDLLSNSPSRRHRIAKGCGQTE 410
>gi|434384585|ref|YP_007095196.1| signal recognition particle protein [Chamaesiphon minutus PCC 6605]
gi|428015575|gb|AFY91669.1| signal recognition particle protein [Chamaesiphon minutus PCC 6605]
Length = 466
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/334 (57%), Positives = 254/334 (76%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S L A ++PTVIL+AGLQG GKTT +AKLA +L+K+ ++ ++VA DVYRPAAID
Sbjct: 86 MGETNSPLANASTKPTVILMAGLQGAGKTTATAKLALHLRKENRTALMVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ GT+ P +IA+QG+ +A++ VD VIVDTAGRLQID MM EL
Sbjct: 146 QLITLGKQIDVPVFDMGTDANPVEIARQGIAKARELGVDTVIVDTAGRLQIDDRMMTELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
DVK + P E+LLVVD+ GQEAA + TF+ IGITGAILTKLDGD+RGGAALSV+ +S
Sbjct: 206 DVKAAIQPDEILLVVDSAIGQEAANVTMTFHDRIGITGAILTKLDGDTRGGAALSVRAIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E L+PFYP+RMA RILGMGDVL+ VEKAQE DA ++ +KI+ A
Sbjct: 266 GQPIKFVGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEDFDIADAAKLTEKIIEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDF+KQ R + MGS+ ++ MIPGMGK++ Q+++ E LK EAMI++MT EER
Sbjct: 326 RFDFNDFIKQMRLLKNMGSLGGLLKMIPGMGKLSDGQLKQGEDQLKKAEAMIQSMTKEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
P+LLA +P RR+R+A+ G E VS+L+++
Sbjct: 386 GNPDLLASTPSRRRRIAKGCGYNESDVSKLISEF 419
>gi|81300580|ref|YP_400788.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus elongatus PCC 7942]
gi|2126515|pir||S68160 probable RNA binding protein ffh - Synechococcus sp. (strain PCC
7942)
gi|81169461|gb|ABB57801.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus elongatus PCC 7942]
Length = 496
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/325 (60%), Positives = 253/325 (77%), Gaps = 1/325 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A PTVIL+AGLQG GKTT +AKLA +L+K+G+S +LVA DVYRPAAID
Sbjct: 97 MGETHVPLAQAAKAPTVILMAGLQGAGKTTATAKLALHLRKEGRSTLLVATDVYRPAAID 156
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G++ P +IA+QG+E+A+++ +D VIVDTAGRLQID MM+EL
Sbjct: 157 QLITLGKQIDVPVFELGSDANPVEIARQGVEKARQEGIDTVIVDTAGRLQIDTEMMEELA 216
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
VK + P EVLLVVD+M GQEAA+L +F+ IGITGAILTKLDGDSRGGAALS++ VS
Sbjct: 217 QVKEAIAPHEVLLVVDSMIGQEAASLTRSFHERIGITGAILTKLDGDSRGGAALSIRRVS 276
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E L+PF+P+RMA RILGMGDVL+ VEKAQE + D E+MQ+KI++A
Sbjct: 277 GQPIKFVGLGEKVEALQPFHPERMASRILGMGDVLTLVEKAQEEIDLADVEKMQEKILAA 336
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDF DFLKQ R + MGS++ I +IPG+ GKI Q+R+ E+ LK +EAMI +MTP+E
Sbjct: 337 KFDFTDFLKQMRLLKNMGSLAGFIKLIPGLGGKINDEQLRQGERQLKRVEAMINSMTPQE 396
Query: 300 REKPELLAESPVRRKRVAQDSGKTE 324
R P+LL+ SP RR R+A+ G+TE
Sbjct: 397 RRDPDLLSNSPSRRHRIAKGCGQTE 421
>gi|428312529|ref|YP_007123506.1| signal recognition particle subunit FFH/SRP54 (srp54) [Microcoleus
sp. PCC 7113]
gi|428254141|gb|AFZ20100.1| signal recognition particle subunit FFH/SRP54 (srp54) [Microcoleus
sp. PCC 7113]
Length = 481
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/330 (60%), Positives = 260/330 (78%)
Query: 15 PTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 74
PT++L+AGLQG GKTT +AKLA +L+KQ ++C+LVA DVYRPAAIDQLV LG+Q+ VPV+
Sbjct: 100 PTIVLMAGLQGTGKTTATAKLALHLQKQNRTCLLVATDVYRPAAIDQLVTLGQQINVPVF 159
Query: 75 TAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLV 134
G + P +IA+QG+ AK+ VD VI+DTAGRLQID+ MM EL +K+ + P E LLV
Sbjct: 160 ELGADADPVEIARQGVARAKETGVDTVIIDTAGRLQIDQDMMGELARIKQTVQPHETLLV 219
Query: 135 VDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERME 194
VD+MTGQEAA L TF+ +IGITGAILTKLDGD+RGGAALSV+ VSG+PIK VG GE++E
Sbjct: 220 VDSMTGQEAANLTRTFHDQIGITGAILTKLDGDTRGGAALSVRRVSGQPIKFVGVGEKVE 279
Query: 195 DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTV 254
L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ+K+++A FDF+DFLKQ R +
Sbjct: 280 ALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLADAEKMQEKMLTAKFDFSDFLKQMRLL 339
Query: 255 ARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRK 314
MGS+ ++ MIPGMGK++ Q+++ E LK EA+I +MT EER P+LLA SP RR+
Sbjct: 340 KNMGSLGGLMKMIPGMGKLSADQLQQGETKLKQSEALINSMTAEERRNPDLLASSPSRRR 399
Query: 315 RVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
R+A+ +G TE+ V+ LV++ +MR M+ +
Sbjct: 400 RIARGAGYTERDVTNLVSEFTKMRNLMQQM 429
>gi|434407141|ref|YP_007150026.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cylindrospermum stagnale PCC 7417]
gi|428261396|gb|AFZ27346.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cylindrospermum stagnale PCC 7417]
Length = 484
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/344 (59%), Positives = 261/344 (75%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG E L + + TV+L+AGLQG GKTT SAKLA +L+K +SC+LVA DVYRPAAID
Sbjct: 86 MGEENVPLAETEGQTTVVLMAGLQGTGKTTASAKLALHLRKLNRSCLLVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G++ P +IA+QG+E A+ + V+ VI+DTAGRLQID+ MM EL
Sbjct: 146 QLITLGKQIDVPVFELGSDADPVEIARQGVERARAEGVNTVIIDTAGRLQIDEDMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E LLVVD+MTGQEAA L TF+ +IGITGAILTKLDGDSRGGAALSV+++S
Sbjct: 206 RIKATVQPDETLLVVDSMTGQEAANLTRTFHDQIGITGAILTKLDGDSRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ+KI+SA
Sbjct: 266 GAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLADAEQMQEKILSA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQ R + MGS+ ++ MIPGMGK++ Q+++ E LK EAMI +MT +ER
Sbjct: 326 KFDFTDFLKQMRLLKNMGSLGGIMKMIPGMGKLSDDQLKQGETQLKRCEAMINSMTKQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P+LL+ SP RR+R+A +G E VS+LVA +MR M+ +
Sbjct: 386 RDPDLLSSSPSRRRRIANGAGYRESDVSKLVADFQKMRSLMQQM 429
>gi|56752330|ref|YP_173031.1| signal recognition particle receptor [Synechococcus elongatus PCC
6301]
gi|56687289|dbj|BAD80511.1| signal recognition particle receptor [Synechococcus elongatus PCC
6301]
Length = 496
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/325 (60%), Positives = 251/325 (77%), Gaps = 1/325 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A PTVIL+AGLQG GKTT +AKLA +L+K+G+S +LVA DVYRPAAID
Sbjct: 97 MGETHVPLAQAAKAPTVILMAGLQGAGKTTATAKLALHLRKEGRSTLLVATDVYRPAAID 156
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G++ P +IA+QG+E+A+++ +D VIVDTAGRLQID MM+EL
Sbjct: 157 QLITLGKQIDVPVFELGSDANPVEIARQGVEKARQEGIDTVIVDTAGRLQIDTEMMEELA 216
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
VK + P EVLLVVD+M GQEA +L +F+ IGITGAILTKLDGDSRGGAALS++ VS
Sbjct: 217 QVKEAIAPHEVLLVVDSMIGQEAPSLTRSFHERIGITGAILTKLDGDSRGGAALSIRRVS 276
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE++E L+PF+P+RMA RILGMGDVL+ VEKAQE + D E+MQ+KI++A
Sbjct: 277 GHPIKFVGLGEKVEALQPFHPERMASRILGMGDVLTLVEKAQEEIDLADVEKMQEKILAA 336
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDF DFLKQ R + MGS++ I +IPG+ GKI Q+R+ E+ LK +EAMI +MTP+E
Sbjct: 337 KFDFTDFLKQMRLLKNMGSLAGFIKLIPGLGGKINDEQLRQGERQLKRVEAMINSMTPQE 396
Query: 300 REKPELLAESPVRRKRVAQDSGKTE 324
R P+LL+ SP RR R+A+ G+TE
Sbjct: 397 RRDPDLLSNSPSRRHRIAKGCGQTE 421
>gi|427725123|ref|YP_007072400.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leptolyngbya
sp. PCC 7376]
gi|427356843|gb|AFY39566.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leptolyngbya
sp. PCC 7376]
Length = 481
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/339 (56%), Positives = 257/339 (75%), Gaps = 1/339 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG + L A+++PTVIL+AGLQG GKTT +AKL+ +L+KQ K+ ++VA DVYRPAAID
Sbjct: 86 MGESNAPLAEAENKPTVILMAGLQGTGKTTATAKLSLFLRKQEKTTLMVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LG Q+ VPV+ G++ P +IA+QG+E+ K+ VD VIVDTAGRLQID MM ELK
Sbjct: 146 QLKTLGAQIDVPVFDLGSDANPVEIARQGIEKGKELGVDYVIVDTAGRLQIDADMMGELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P + LLVVDAMTGQEAA+L TF+ EIG+TGAILTK+DGD+RGGAALSV+ +S
Sbjct: 206 QIKDTIQPDDTLLVVDAMTGQEAASLTRTFHTEIGVTGAILTKMDGDTRGGAALSVRTIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK +G GE++E L+PFYPDRMA RIL MGDVL+ VEKAQE + D EEMQ K++ A
Sbjct: 266 GQPIKFIGVGEKVEALDPFYPDRMASRILNMGDVLTLVEKAQEAIDLSDVEEMQSKLLEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDF+DF+KQ R + MGS+ ++ +IPGMG K+ + + E LK +E MI +MT EE
Sbjct: 326 RFDFDDFVKQMRLLKNMGSLGGLMKLIPGMGSKLDSGMLEQGEAQLKRVEIMINSMTKEE 385
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 338
R+ P+LLA++P RR R+A+ SG +++ VS+L+ +MR
Sbjct: 386 RKNPDLLAQTPKRRTRIAKGSGMSDKDVSKLITDFTRMR 424
>gi|428305921|ref|YP_007142746.1| signal recognition particle subunit FFH/SRP54 (srp54) [Crinalium
epipsammum PCC 9333]
gi|428247456|gb|AFZ13236.1| signal recognition particle subunit FFH/SRP54 (srp54) [Crinalium
epipsammum PCC 9333]
Length = 482
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/356 (58%), Positives = 267/356 (75%), Gaps = 4/356 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A++ PTV+L+AGLQG GKTT +AKLA +L+K + +LVA DVYRPAAID
Sbjct: 86 MGETNVPLAKAETSPTVVLMAGLQGTGKTTATAKLALHLQKLERRALLVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLV LG+Q+ VPV+ GT+ P +IA+QG+E+AK+ VD VI+DTAGRLQID+ MM EL
Sbjct: 146 QLVTLGQQINVPVFAMGTDADPVEIARQGVEKAKEMGVDTVIIDTAGRLQIDENMMGELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K ++ P E LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGD+RGGAALSV+ +S
Sbjct: 206 RIKEIVQPHETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKLDGDTRGGAALSVRRIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DA +MQ+K+MSA
Sbjct: 266 GQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLVDAAKMQEKMMSA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQ R + MGS+ ++ MIPGMGK++ Q+ + E LK E+MI +MT EER
Sbjct: 326 KFDFTDFLKQMRLLKNMGSLGGMLKMIPGMGKLSNEQLSQGETQLKRAESMINSMTKEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 356
P+LL+ SP RR+RVA+ G E VS+LV+ +MR +LM M G++P++
Sbjct: 386 GNPDLLSSSPSRRRRVARGCGYGESDVSKLVSDFTKMR----SLMQQMSQGAMPSM 437
>gi|300867755|ref|ZP_07112400.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oscillatoria
sp. PCC 6506]
gi|300334338|emb|CBN57572.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oscillatoria
sp. PCC 6506]
Length = 483
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/344 (59%), Positives = 259/344 (75%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S L A S PT++L+AGLQG GKTT SAKLA L+KQ +S +LVA D+YRPAAID
Sbjct: 86 MGETNSPLAIADSAPTIVLMAGLQGTGKTTASAKLALQLRKQNRSTLLVATDIYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G + P +IA+QG++ A++ VD VIVDTAGRLQID+ MM EL
Sbjct: 146 QLITLGKQIDVPVFELGKDTDPVEIARQGIDRARELGVDTVIVDTAGRLQIDQDMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGDSRGGAALSV+++S
Sbjct: 206 RIKETIQPHETLLVVDAMTGQEAANLTRTFHDQIGITGAILTKMDGDSRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ+KI++A
Sbjct: 266 GAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDITDAEQMQEKILTA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQ R + MGS+ ++ MIPG+ K++ +R+ E L+ EAMI +MT EER
Sbjct: 326 KFDFTDFLKQMRLLKNMGSLGGILKMIPGLNKMSDDDMRKGEVQLRRTEAMINSMTTEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
PELL+ SP RR+R+A+ SG E V++LV+ +MR M+ L
Sbjct: 386 RNPELLSSSPSRRRRIAKGSGFVEADVAKLVSDFQKMRNMMQQL 429
>gi|414078759|ref|YP_006998077.1| signal recognition particle protein SRP [Anabaena sp. 90]
gi|280987222|gb|ADA00385.1| signal recognition particle protein SRP [Anabaena sp. 90]
gi|413972175|gb|AFW96264.1| signal recognition particle protein SRP [Anabaena sp. 90]
Length = 482
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/342 (59%), Positives = 258/342 (75%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG E L + TV+L+AGLQG GKTT +AKLA +L+KQ +SC+LVA D+YRPAAID
Sbjct: 86 MGEENVPLAEVAGKTTVVLMAGLQGTGKTTATAKLALHLRKQDRSCLLVATDIYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G P +IA+QG+E A+ + ++ VI+DTAGRLQID+ MM EL
Sbjct: 146 QLITLGKQIDVPVFELGIAADPVEIARQGVERARAEGINTVIIDTAGRLQIDEDMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K V+ P E LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGDSRGGAALSV+++S
Sbjct: 206 RIKEVVQPDETLLVVDAMTGQEAANLTRTFHNQIGITGAILTKMDGDSRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ+KI+SA
Sbjct: 266 GAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLADAEQMQEKILSA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQ R + MGS+ ++ MIPGM K++ Q+++ E LK EAMI +MT +ER
Sbjct: 326 KFDFTDFLKQMRLLKNMGSLGGIMKMIPGMNKLSEDQLKQGETQLKRCEAMINSMTGKER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
P+LL+ SP RR+R+A SG E VS+LVA +MR M+
Sbjct: 386 RDPDLLSSSPSRRRRIASGSGYREADVSKLVADFQKMRSLMQ 427
>gi|428206885|ref|YP_007091238.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Chroococcidiopsis thermalis PCC 7203]
gi|428008806|gb|AFY87369.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Chroococcidiopsis thermalis PCC 7203]
Length = 487
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/338 (59%), Positives = 258/338 (76%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG L A + PT++L+AGLQG GKTT +AKLA +L+KQ SC++VA DVYRPAAID
Sbjct: 86 MGETNVPLAQADAAPTIVLMAGLQGTGKTTATAKLALHLRKQDLSCLMVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLV LG+Q+ VPV+ G+ P +IA++G+E+AK + VD VI+DTAGRLQID+ MM EL
Sbjct: 146 QLVTLGKQIDVPVFEMGSNADPVEIAREGVEQAKAQGVDTVIIDTAGRLQIDQDMMAELI 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
VK + P E LLVVDAMTGQEAA L TF+ ++GITGAILTKLDGDSRGGAALSV+ +S
Sbjct: 206 RVKEAVQPHETLLVVDAMTGQEAANLTRTFHEQVGITGAILTKLDGDSRGGAALSVRRIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQ+KI+SA
Sbjct: 266 GQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDLADAEKMQEKILSA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQ R + MGS+ ++ +IPGM K++ Q+++ E LK EAMI +MT +ER
Sbjct: 326 KFDFTDFLKQMRLLKNMGSLGGIMKLIPGMNKMSDDQLKQGETQLKRCEAMINSMTKQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 338
+ P+LL+ SP RR+R+A+ SG E VS+LV+ +MR
Sbjct: 386 KDPDLLSSSPSRRRRIARGSGYKESDVSKLVSDFQRMR 423
>gi|409990172|ref|ZP_11273587.1| signal recognition particle protein, partial [Arthrospira platensis
str. Paraca]
gi|409938960|gb|EKN80209.1| signal recognition particle protein, partial [Arthrospira platensis
str. Paraca]
Length = 360
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/324 (59%), Positives = 244/324 (75%)
Query: 21 AGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEV 80
AGLQG GKTT SAKLA +L+K+ +S +LVA DVYRPAAIDQL+ LG+Q+ VPV+ G +
Sbjct: 1 AGLQGTGKTTASAKLALHLQKENRSSLLVATDVYRPAAIDQLMTLGKQINVPVFELGKDA 60
Query: 81 KPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTG 140
P +IA+QG+E K + +D +I+DTAGRLQID+ MM EL +K + P E LLVVDAMTG
Sbjct: 61 DPVEIARQGIEYGKAQGIDTIIIDTAGRLQIDQNMMAELAQIKETVQPHETLLVVDAMTG 120
Query: 141 QEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFY 200
QEAA L TFN IGITGAILTK+DGDSRGGAALS++ VSG PIK VG GE++E L+PFY
Sbjct: 121 QEAATLTQTFNDRIGITGAILTKMDGDSRGGAALSIRRVSGAPIKFVGVGEKVEALQPFY 180
Query: 201 PDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSM 260
P+RMA RILGMGD+L+ VEKA+E DAE+MQ+KI+ A FDF DFLKQTR + MGS+
Sbjct: 181 PERMASRILGMGDILTLVEKAEEEFDIADAEKMQEKILEAKFDFTDFLKQTRLMKNMGSL 240
Query: 261 SRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDS 320
++ +IPGM KI+ Q+ E LK EAMI +MT EER+ PELL+ SP RRKRVA+ +
Sbjct: 241 GGLVKLIPGMNKISQEQLDAGESQLKRSEAMINSMTIEERKNPELLSNSPSRRKRVAKGA 300
Query: 321 GKTEQQVSQLVAQLFQMRVRMKNL 344
G E+ V +LV+ +MR M+ +
Sbjct: 301 GYAEKDVMRLVSDFQRMRSLMQQM 324
>gi|124026411|ref|YP_001015526.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. NATL1A]
gi|123961479|gb|ABM76262.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. NATL1A]
Length = 487
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 255/344 (74%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGE L ++ +PTVIL+AGLQG GKTT +AKL LK++ K +LVA D YRPAAID
Sbjct: 86 MGGENDPLANSEEQPTVILMAGLQGAGKTTATAKLGLLLKEKNKKPLLVAADTYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLV LG+Q+ V V+ + +KP +IAK+GLE+AKK+ D V+VDTAGRLQID MM E+
Sbjct: 146 QLVTLGKQIDVEVFNLSSNLKPEEIAKKGLEKAKKEGFDTVLVDTAGRLQIDTDMMGEMV 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P EVLLVVD+M GQEAA + +F+ ++GITGA+LTKLDGDSRGGAALS++++S
Sbjct: 206 RIKEAVQPDEVLLVVDSMIGQEAADITRSFHEKVGITGAVLTKLDGDSRGGAALSIRKIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE++E L+PFYP+RMA RILGMGDVL+ VEKAQ+ ++ DAE MQKK+ A
Sbjct: 266 GKPIKFIGTGEKVEALQPFYPERMASRILGMGDVLTLVEKAQKEVEIADAEIMQKKLQEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF+DF+KQ R + RMGS+ ++ MIPGM KI ++ E LK +EAMI +M+ EER
Sbjct: 326 TFDFSDFVKQMRMIKRMGSLGGLLKMIPGMNKIDDGMIKSGEDQLKKIEAMIGSMSVEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
KPELLA P RR+RVA SG V +++A +MR MK +
Sbjct: 386 NKPELLAAQPSRRRRVASGSGHKPADVDKVLADFQRMRGLMKQM 429
>gi|87125498|ref|ZP_01081343.1| Signal recognition particle protein [Synechococcus sp. RS9917]
gi|86166798|gb|EAQ68060.1| Signal recognition particle protein [Synechococcus sp. RS9917]
Length = 492
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/344 (54%), Positives = 258/344 (75%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG + L A+ PTV+L+AGLQG GKTT +AKL YLK QG+ ++V DVYRPAAID
Sbjct: 86 MGGGNAPLARAEQAPTVVLMAGLQGAGKTTATAKLGLYLKDQGRRALMVGADVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LGEQ+GV V++ G E KP IA GL +A+++ D ++VDTAGRLQID++MMDE+
Sbjct: 146 QLRTLGEQIGVEVFSLGAEAKPEDIASAGLAKARQEGFDTLLVDTAGRLQIDQSMMDEMV 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++ + P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++VS
Sbjct: 206 RIRSAVQPDEVLLVVDSMIGQEAAELTRAFHEQVGITGAVLTKLDGDSRGGAALSIRKVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQKK+ A
Sbjct: 266 GQPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQKKLQEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
+FDF+DFL+Q R + RMGS+ ++ MIPGM K+ +++ E+ LK +EAMI +MT ER
Sbjct: 326 SFDFSDFLQQMRLIKRMGSLGGLMKMIPGMNKLDDGMLKQGEQQLKKIEAMIGSMTVAER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
++PELLA P RR+R+A SG + V +++A +MR M+ +
Sbjct: 386 QQPELLAAQPSRRRRIASGSGHSPADVDKVLADFQKMRGFMQQM 429
>gi|72382692|ref|YP_292047.1| signal recognition particle protein [Prochlorococcus marinus str.
NATL2A]
gi|72002542|gb|AAZ58344.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Prochlorococcus marinus str. NATL2A]
Length = 487
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 254/344 (73%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGE L ++ +PTVIL+AGLQG GKTT +AKL LK++ K +LVA D YRPAAID
Sbjct: 86 MGGENDPLANSEEQPTVILMAGLQGAGKTTATAKLGLLLKEKNKKPLLVAADTYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLV LG+Q+ V V+ + +KP +IAK+GLE+AK + D V+VDTAGRLQID MM E+
Sbjct: 146 QLVTLGKQIDVEVFNLSSNLKPEEIAKKGLEKAKNEGFDTVLVDTAGRLQIDTDMMGEMV 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P EVLLVVD+M GQEAA + +F+ ++GITGA+LTKLDGDSRGGAALS++++S
Sbjct: 206 RIKEAVQPDEVLLVVDSMIGQEAADITRSFHEKVGITGAVLTKLDGDSRGGAALSIRKIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE++E L+PFYP+RMA RILGMGDVL+ VEKAQ+ ++ DAE MQKK+ A
Sbjct: 266 GKPIKFIGTGEKVEALQPFYPERMASRILGMGDVLTLVEKAQKEVEIADAEIMQKKLQEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF+DF+KQ R + RMGS+ ++ MIPGM KI ++ E LK +EAMI +M+ EER
Sbjct: 326 TFDFSDFVKQMRMIKRMGSLGGLLKMIPGMNKIDDGMIKSGEDQLKKIEAMIGSMSVEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
KPELLA P RR+RVA SG V +++A +MR MK +
Sbjct: 386 NKPELLAAQPSRRRRVASGSGHKPADVDKVLADFQRMRGLMKQM 429
>gi|440681861|ref|YP_007156656.1| signal recognition particle subunit FFH/SRP54 (srp54) [Anabaena
cylindrica PCC 7122]
gi|428678980|gb|AFZ57746.1| signal recognition particle subunit FFH/SRP54 (srp54) [Anabaena
cylindrica PCC 7122]
Length = 482
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/344 (58%), Positives = 259/344 (75%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG E L + + TV+L+AGLQG GKTT +AKLA +L+K +SC+LVA DVYRPAAID
Sbjct: 86 MGEENVPLAEVEGKTTVVLMAGLQGTGKTTATAKLALHLRKLNRSCLLVATDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL+ LG+Q+ VPV+ G++ P +IA+QG+E A+ + ++ VIVDTAGRLQID+ MM EL
Sbjct: 146 QLLTLGKQIDVPVFELGSDADPVEIARQGVERARAEGINTVIVDTAGRLQIDQEMMAELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E LLVVD+MTGQEAA L TF+ +IGITGAILTKLDGDSRGGAALSV+++S
Sbjct: 206 RIKSTIEPDETLLVVDSMTGQEAANLTRTFHDQIGITGAILTKLDGDSRGGAALSVRQIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE++E L+PFYP+RMA RILGMGDVL+ VEKAQE + DAE+MQ KI+SA
Sbjct: 266 GAPIKFVGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEIDLADAEQMQAKILSA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQ R + MGS+ ++ MIPGM K++ Q+++ E LK EAMI +MT +ER
Sbjct: 326 KFDFTDFLKQMRLLKNMGSLGGIMKMIPGMNKLSDDQLKQGETQLKRCEAMINSMTRQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P+LL+ SP RR+R+A +G E VS+LVA +MR M+ +
Sbjct: 386 LDPDLLSSSPSRRRRIASGAGYREADVSKLVADFQKMRSLMQQM 429
>gi|86607761|ref|YP_476523.1| signal recognition particle protein [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86556303|gb|ABD01260.1| signal recognition particle protein [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 487
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/328 (57%), Positives = 252/328 (76%), Gaps = 1/328 (0%)
Query: 11 AKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG 70
A+ PT++L+AGLQG GKTT AKLA YL+KQGK ++VAGD+YRPAAIDQL LG+Q+
Sbjct: 96 AEQPPTIVLMAGLQGSGKTTTCAKLALYLRKQGKKSLMVAGDIYRPAAIDQLKTLGQQIQ 155
Query: 71 VPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTE 130
+PV+ G + P +IA+QG+E A+++ D VI+DTAGRLQID MM EL+ +K + P E
Sbjct: 156 IPVFDLG-KADPVEIARQGVETARQQGYDYVILDTAGRLQIDLEMMAELERIKAAVQPHE 214
Query: 131 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 190
+LLVVDAM GQEAA+L F+ +GITGAILTKLDGD+RGGAALS+++VSG+PIK +G G
Sbjct: 215 ILLVVDAMIGQEAASLTRAFHERLGITGAILTKLDGDTRGGAALSIRQVSGQPIKFIGVG 274
Query: 191 ERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQ 250
E++E L+PFYPDRMA RILGMGD+LS VEKAQE + DA M +K+M+A FDF DFLKQ
Sbjct: 275 EKVEALDPFYPDRMASRILGMGDILSLVEKAQEEIDLGDAASMAEKMMTAQFDFTDFLKQ 334
Query: 251 TRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESP 310
R + RMGS++ ++ ++PGMGKI+ Q+++ + L EAMI +MTPEER P+LLA S
Sbjct: 335 MRLIKRMGSLAGLLRLMPGMGKISEEQLQKGQDQLARAEAMINSMTPEERRNPDLLARSV 394
Query: 311 VRRKRVAQDSGKTEQQVSQLVAQLFQMR 338
R++RVA+ SG + VS+LV+ +MR
Sbjct: 395 SRKRRVARGSGHKLEDVSRLVSDFQRMR 422
>gi|124023656|ref|YP_001017963.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9303]
gi|123963942|gb|ABM78698.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9303]
Length = 494
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/344 (54%), Positives = 262/344 (76%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG+ + + AK PTV+L+AGLQG GKTT +AKL +LK QG+ ++VA DVYRPAAID
Sbjct: 86 MGGDNAPMAEAKDSPTVVLMAGLQGAGKTTATAKLGLHLKDQGQRPLMVAADVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LGEQ+GV V++ G +VKP +IA GL +A+++ D ++VDTAGRLQID MM+E+
Sbjct: 146 QLRTLGEQIGVDVFSLGDDVKPEEIAAAGLAKAREEGFDTLLVDTAGRLQIDTEMMEEMV 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++ + P EVLLVVD+M GQEAA L F+ ++GITG++LTKLDGDSRGGAALS+++VS
Sbjct: 206 RIRSAVEPDEVLLVVDSMIGQEAAELTRAFHDKVGITGSVLTKLDGDSRGGAALSIRKVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQKK+ A
Sbjct: 266 GQPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQKKLQEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
+FDF+DFL+QTR + RMGS+ +I M+PGM K+ +++ E+ LK +EAMI +MT +ER
Sbjct: 326 SFDFSDFLQQTRLIKRMGSLGGLIKMMPGMNKLDDGMLKQGEQQLKRIEAMIGSMTADER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
++PELLA P RR+R+A SG + V +++A +MR M+ +
Sbjct: 386 KQPELLASQPSRRRRIAGGSGHSPADVDKVLADFQKMRGFMQQM 429
>gi|412993787|emb|CCO14298.1| signal recognition particle protein [Bathycoccus prasinos]
Length = 571
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/387 (55%), Positives = 271/387 (70%), Gaps = 13/387 (3%)
Query: 15 PTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 74
PTVIL+AGLQGVGKTT KLA LKKQ K+C+LVA DVYRPAAIDQL LG + VPVY
Sbjct: 172 PTVILMAGLQGVGKTTACGKLALSLKKQNKTCLLVATDVYRPAAIDQLKKLGSDLNVPVY 231
Query: 75 TAGTEVKPSQIAKQGLEEAKKK-NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLL 133
G P IA G+ EAKK+ ++DVVIVDTAGRL ID+A+M+EL K E LL
Sbjct: 232 DEGANASPPSIAANGVAEAKKRGDIDVVIVDTAGRLNIDEALMNELIATKMSTQADETLL 291
Query: 134 VVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERM 193
VVDAMTGQEAA L +F I ITGAILTKLDGD+RGGAALSV+EVSGKPIK G GE+M
Sbjct: 292 VVDAMTGQEAATLTKSFADAIDITGAILTKLDGDTRGGAALSVREVSGKPIKFTGVGEKM 351
Query: 194 EDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRT 253
+ L+PFYP+RM RILGMGDV+SFVEKAQE ++Q DAE+M++KIM A FDF+DFLK
Sbjct: 352 DALDPFYPERMTSRILGMGDVVSFVEKAQEAVKQADAEQMKEKIMKATFDFDDFLKNMDM 411
Query: 254 VARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPV-- 311
+ MGSMS+++ MIPG K++ ++EAEKS KI +++I +MTPEER+ P++L S
Sbjct: 412 MGDMGSMSQLMKMIPGANKLSDKDMQEAEKSFKIAKSLIMSMTPEERKYPDMLVASSTAE 471
Query: 312 -RRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM--EGGSL---PALSNLE-DALK 364
RR R+ + +GKTE+ +++L+ MRV+M+ + M E L P LS+ E L
Sbjct: 472 SRRNRIVKGAGKTEEDLAELIVMFGGMRVKMQQMSAAMGSEAAKLGLQPQLSSDEMTKLA 531
Query: 365 SE---QKAPPGTARRKRRSESRRQFVD 388
SE ++ PG RR + + + V+
Sbjct: 532 SEKVRKRIKPGHVRRNKAKKVPKSLVE 558
>gi|33862622|ref|NP_894182.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9313]
gi|33634538|emb|CAE20524.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9313]
Length = 497
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/344 (54%), Positives = 260/344 (75%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG+ + + A+ PTV+L+AGLQG GKTT +AKL +LK QG+ ++VA DVYRPAAID
Sbjct: 86 MGGDNAPMAEAEDSPTVVLMAGLQGAGKTTATAKLGLHLKDQGQRPLMVAADVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LGEQ+GV V++ G +VKP +IA GL +A+++ D ++VDTAGRLQID MM+E+
Sbjct: 146 QLRTLGEQIGVDVFSLGDDVKPEEIAAAGLAKAREEGFDTLLVDTAGRLQIDTEMMEEMV 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++ + P EVLLVVD+M GQEAA L F+ ++GITG++LTKLDGDSRGGAALS+++VS
Sbjct: 206 RIRSAVEPDEVLLVVDSMIGQEAAELTRAFHDKVGITGSVLTKLDGDSRGGAALSIRKVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQKK+ A
Sbjct: 266 GQPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQKKLQEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
+FDF+DFL+Q R + RMGS+ +I M+PGM K+ +++ E+ LK +EAMI +MT +ER
Sbjct: 326 SFDFSDFLQQMRLIKRMGSLGGLIKMMPGMNKLDDGMLKQGEQQLKRIEAMIGSMTADER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+PELLA P RR+R+A SG + V +++A +MR M+ +
Sbjct: 386 NQPELLASQPSRRRRIAGGSGHSPADVDKVLADFQKMRGFMQQM 429
>gi|33240809|ref|NP_875751.1| signal recognition particle protein [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33238338|gb|AAQ00404.1| Signal recognition particle GTPase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 485
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/344 (55%), Positives = 257/344 (74%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S L + +P+VIL+AGLQG GKTT +AKL YLK +G ++VA DVYRPAAID
Sbjct: 86 MGGANSPLADSTKKPSVILMAGLQGAGKTTAAAKLGLYLKDKGLKPLMVAADVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LG+Q+ V V++ G E KP IA GL++A++++ D +IVDTAGRLQID+ MM+E+
Sbjct: 146 QLNTLGKQINVEVFSLGKESKPEDIAASGLKKAQEEDFDTLIVDTAGRLQIDEEMMNEMV 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++ ++P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++VS
Sbjct: 206 RIRSAVDPDEVLLVVDSMIGQEAADLTRAFHEKVGITGAVLTKLDGDSRGGAALSIRKVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK +G GE++E L+PF+P+RMAGRILGMGDVL+ VEKAQ+ ++ DAE+MQ+K A
Sbjct: 266 GQPIKFIGTGEKVEALQPFHPERMAGRILGMGDVLTLVEKAQKEVEIADAEQMQRKFQEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF+DF+KQ R + RMGS+ ++ MIPGM KI ++ E LK +EAMI +MT E+
Sbjct: 326 TFDFSDFVKQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKSGEDQLKRIEAMIGSMTNAEQ 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+PELLA P RRKRVA SG T +V +++A +MR MK +
Sbjct: 386 TQPELLAAQPSRRKRVAFGSGHTPVEVDKVLADFQKMRGLMKQM 429
>gi|255070283|ref|XP_002507223.1| type II secretory pathway family [Micromonas sp. RCC299]
gi|226522498|gb|ACO68481.1| type II secretory pathway family [Micromonas sp. RCC299]
Length = 568
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/376 (53%), Positives = 274/376 (72%), Gaps = 12/376 (3%)
Query: 15 PTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 74
PTVIL+AGLQGVGKTT KLA YLKKQGK +LVA DVYRPAAI+QL LGEQV PV+
Sbjct: 186 PTVILMAGLQGVGKTTACGKLALYLKKQGKDSLLVATDVYRPAAIEQLKRLGEQVKTPVF 245
Query: 75 TAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLV 134
G V P ++A+ GLE+A+ + +DVVI+DTAGRLQ+D +M+EL+ K E+LLV
Sbjct: 246 DMGVRVDPPEVARLGLEKARAEGIDVVIIDTAGRLQVDVHLMEELRATKIATAADEILLV 305
Query: 135 VDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERME 194
VDAMTGQEAAAL F+ +GITGA+LTK+DGD+RGGAALSV+EVSGKPIK G GE+ME
Sbjct: 306 VDAMTGQEAAALTAAFDEAVGITGAVLTKMDGDTRGGAALSVREVSGKPIKFTGVGEKME 365
Query: 195 DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTV 254
LEPFYP+RMA RILGMGDV++ VE+AQ+V++ E+AE+M+ KI+SA FDFNDF+KQ +
Sbjct: 366 ALEPFYPERMASRILGMGDVVTLVERAQQVVKNEEAEQMRDKILSATFDFNDFIKQMEMM 425
Query: 255 ARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELL---AESPV 311
+MG M + ++PGM ++ +++EA+KSLK+ +++I +MT +ER+ P++L A +
Sbjct: 426 GQMGGMDGFMKLLPGMSGMSEREMQEADKSLKVAKSLILSMTSKERQFPDILVAGASAKS 485
Query: 312 RRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS-----LPALSNLE-DALKS 365
RRKR+ + +G++E+ +SQL+ MRV+M+ + + G S P LS + + L +
Sbjct: 486 RRKRIIEGAGRSEKDLSQLIVLFGSMRVKMQKMTAEITGASAEVGLTPQLSEEDMNTLAN 545
Query: 366 E---QKAPPGTARRKR 378
E + PG RR R
Sbjct: 546 EGLRKNVSPGMVRRLR 561
>gi|33866152|ref|NP_897711.1| signal recognition particle protein (SRP54) [Synechococcus sp. WH
8102]
gi|33639127|emb|CAE08133.1| signal recognition particle protein (SRP54) [Synechococcus sp. WH
8102]
Length = 487
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/344 (54%), Positives = 256/344 (74%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG+ + L A PTV+L+AGLQG GKTT +AKL +LK QG+ ++V DVYRPAAI+
Sbjct: 86 MGGDNAPLAKAAEAPTVVLMAGLQGAGKTTATAKLGLHLKDQGRRALMVGADVYRPAAIE 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LG Q+GV V++ GTE KP +IA GL +AK++ D ++VDTAGRLQID MM+E+
Sbjct: 146 QLKTLGGQIGVEVFSLGTEAKPEEIAAAGLAKAKEEGFDTLLVDTAGRLQIDTEMMEEMV 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++ + P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++VS
Sbjct: 206 RIRTAVQPDEVLLVVDSMIGQEAAELTRAFHDQVGITGAVLTKLDGDSRGGAALSIRKVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQKK+ A
Sbjct: 266 GQPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQKKLQEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF+DF++Q R + RMGS+ ++ MIPGM K+ +++ E+ LK +EAMI +MTP+ER
Sbjct: 326 TFDFSDFVQQMRLIKRMGSLGGLMKMIPGMNKLDDGILKQGEQQLKRIEAMIGSMTPKER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E P+LLA P RR+R+A SG V +++A +MR M+ +
Sbjct: 386 ENPDLLAGQPSRRRRIAAGSGHQPADVDKVLADFQKMRGFMQQM 429
>gi|194476608|ref|YP_002048787.1| signal recognition particle protein (SRP54) [Paulinella
chromatophora]
gi|171191615|gb|ACB42577.1| signal recognition particle protein (SRP54) [Paulinella
chromatophora]
Length = 481
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/344 (54%), Positives = 250/344 (72%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG + L TV+L+AGLQG GKTT +AKLA YLK QG+ ++VA DVYRPAAID
Sbjct: 86 MGANNTPLHKQSHTVTVVLMAGLQGAGKTTAAAKLALYLKNQGEKVLMVAADVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+Q+ V V+T E P IA GL++A ++ D +IVDTAGRLQID AMM E+
Sbjct: 146 QLFVLGKQIDVEVFTLNPESIPEDIAAAGLQKAIREGFDYLIVDTAGRLQIDTAMMQEMV 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++ +NP E+LLVVD+M GQEAA L F+ +IGITGA+LTKLDGD+RGGAALS+++VS
Sbjct: 206 RIRSAVNPNEILLVVDSMIGQEAAELTRAFHEQIGITGAVLTKLDGDARGGAALSIRKVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK +G GE++E L+PF+P+RMA RILGMGD+++ VEKAQE ++ D E+MQ+K+ A
Sbjct: 266 GAPIKFIGTGEKVEALQPFHPERMASRILGMGDIVTLVEKAQEEVELADVEKMQRKLQEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
+FDF+DFL+Q R V RMGS+ ++ MIPGM KI +RE E LK +E+MI +MTP ER
Sbjct: 326 SFDFSDFLQQMRLVKRMGSLGGLMKMIPGMNKIDSTMLREGEAQLKRIESMIGSMTPTER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
EKPELLA P RR R+A+ SG V +++ +MR M+ +
Sbjct: 386 EKPELLASQPSRRGRIAKGSGHKIADVDKMLVDFQKMRGFMQQM 429
>gi|148242807|ref|YP_001227964.1| Signal recognition particle protein [Synechococcus sp. RCC307]
gi|147851117|emb|CAK28611.1| Signal recognition particle protein [Synechococcus sp. RCC307]
Length = 493
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/344 (53%), Positives = 257/344 (74%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG + L A+ PTV+L+AGLQG GKTT +AKL +LK+QG+ +LVA D YRPAAID
Sbjct: 90 MGGANAPLAKAEQSPTVVLMAGLQGAGKTTATAKLGLHLKEQGRRALLVAADTYRPAAID 149
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LG+Q+ V V++ G + KP IA+ GL + +++ D VIVDTAGRLQID +MM+E+
Sbjct: 150 QLQTLGQQIDVEVFSLGADAKPEAIAEAGLAKGREEGFDTVIVDTAGRLQIDTSMMEEMV 209
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++ + P EVLLVVD+M GQEAA L +F+ ++GITGA+LTK+DGDSRGGAALS+++VS
Sbjct: 210 RIRSAVAPDEVLLVVDSMIGQEAADLTRSFHEQVGITGAVLTKMDGDSRGGAALSIRKVS 269
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQ+K+ A
Sbjct: 270 GAPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVEIADVEKMQRKLQEA 329
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
+FDF+DF+KQ R + RMGS+ ++ MIPGM KI +++ E LK +EAMI +MT +ER
Sbjct: 330 SFDFSDFVKQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEAQLKRIEAMIGSMTVQER 389
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E P+LLA P RR+R+A+ SG +V +++A +MR M+ +
Sbjct: 390 ENPDLLASQPSRRRRIAKGSGHQPAEVDKMLADFQKMRGFMQQM 433
>gi|303273580|ref|XP_003056150.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
gi|226462234|gb|EEH59526.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
Length = 559
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/396 (51%), Positives = 278/396 (70%), Gaps = 16/396 (4%)
Query: 1 MGGEVSELVFAKSR--PTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAA 58
GG+ +L+F K PTVIL+AGLQGVGKTT KLA +LK QGK +LVA DVYRPAA
Sbjct: 164 FGGD--KLIFRKEGEGPTVILMAGLQGVGKTTACGKLALFLKAQGKQSLLVATDVYRPAA 221
Query: 59 IDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDE 118
IDQL LGEQ+ VPV+ GT+ P IA+ G+E+AK +N DVVIVDTAGRLQ+D+ +M E
Sbjct: 222 IDQLKKLGEQIDVPVFELGTDFSPPDIARSGVEKAKLENFDVVIVDTAGRLQVDEMLMAE 281
Query: 119 LKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKE 178
L K E LLVVDAMTGQEAA+L FN +GITGA+LTK+DGD+RGGAALSV+E
Sbjct: 282 LLATKAATRADETLLVVDAMTGQEAASLTAAFNDAVGITGAVLTKMDGDTRGGAALSVRE 341
Query: 179 VSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIM 238
VSGKPIK +G GE+++ LEPF+P+RM RILGMGDV+S VE+AQ +++E A M+ KI+
Sbjct: 342 VSGKPIKFIGSGEKLDALEPFFPERMTTRILGMGDVVSLVERAQVAVKEEQANLMRDKIL 401
Query: 239 SANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPE 298
SA FDFNDFL Q + +MG M + M+PGM ++ ++++AEKSL + +++I +MTP
Sbjct: 402 SATFDFNDFLSQLEMMGKMGGMGGLTKMMPGMNTMSDKELQDAEKSLSVAKSLIMSMTPR 461
Query: 299 EREKPELL---AESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG----- 350
ER+ P+LL + + RR RV + SG++++ ++ L+ MRV+M++L M G
Sbjct: 462 ERQFPDLLVAGSSAASRRGRVVEGSGRSDKDLANLIVMFGSMRVKMQSLSAQMNGTAKEV 521
Query: 351 GSLPALSNLE-DALKSE---QKAPPGTARRKRRSES 382
G +P LS ++ + L E ++ PG RR++ + S
Sbjct: 522 GLVPQLSEVDLNKLAFEGVGKRVSPGMVRRRKLNAS 557
>gi|86605764|ref|YP_474527.1| signal recognition particle protein [Synechococcus sp. JA-3-3Ab]
gi|86554306|gb|ABC99264.1| signal recognition particle protein [Synechococcus sp. JA-3-3Ab]
Length = 483
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/346 (56%), Positives = 256/346 (73%), Gaps = 5/346 (1%)
Query: 11 AKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG 70
A+ PT++++ GLQG GKTT AKLA YL+KQGK +LVAGD+YRPAAIDQL LG+Q+
Sbjct: 96 AEQPPTIVVMVGLQGSGKTTTCAKLALYLRKQGKRPLLVAGDIYRPAAIDQLKTLGQQIQ 155
Query: 71 VPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTE 130
+PV+ G + P +IA+QG+ A+++ D VI+DTAGRLQID MM EL+ +K + P E
Sbjct: 156 IPVFDLG-KTDPVEIARQGVAAAREQGYDYVILDTAGRLQIDLEMMAELERIKAAVQPHE 214
Query: 131 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 190
+LLVVDAM GQEAA L F+ +G+TG ILTKLDGDSRGGAALS+++VSG+PIK VG G
Sbjct: 215 ILLVVDAMIGQEAANLTQAFHERLGLTGTILTKLDGDSRGGAALSIRQVSGQPIKFVGVG 274
Query: 191 ERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQ 250
E++E L+PFYPDRMA RILGMGD+LS VEKAQE + DA M +K+M+A FDF DFLKQ
Sbjct: 275 EKVEALDPFYPDRMASRILGMGDILSLVEKAQEEIDLGDAARMAEKMMTAQFDFTDFLKQ 334
Query: 251 TRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESP 310
R + RMGS++ ++ ++PGMGKI+ Q+++ + L EAMI +MTPEER P+LLA S
Sbjct: 335 MRLIKRMGSLAGLLRLMPGMGKISEEQLQKGQDQLARAEAMINSMTPEERRNPDLLARSV 394
Query: 311 VRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 356
R++RVA SG + VS+LV+ FQ RM+++M M G L +
Sbjct: 395 SRKRRVALGSGHKLEDVSRLVSD-FQ---RMRDMMRSMSLGGLAGM 436
>gi|78212426|ref|YP_381205.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus sp. CC9605]
gi|78196885|gb|ABB34650.1| signal recognition particle protein [Synechococcus sp. CC9605]
Length = 492
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/344 (54%), Positives = 252/344 (73%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG+ + L A PTV+L+AGLQG GKTT +AKL +LK QG+ ++V DVYRPAAI+
Sbjct: 86 MGGDNAPLAKAADAPTVVLMAGLQGAGKTTATAKLGLHLKDQGRRALMVGADVYRPAAIE 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LG Q+ V V++ G E KP IA GL +AK++ D ++VDTAGRLQID MM+E+
Sbjct: 146 QLKTLGAQIDVEVFSLGAEAKPEDIAAAGLAKAKEEGFDTLLVDTAGRLQIDTEMMEEMV 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++ + P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++VS
Sbjct: 206 RIRTAVQPDEVLLVVDSMIGQEAAELTRAFHDQVGITGAVLTKLDGDSRGGAALSIRKVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQKK+ A
Sbjct: 266 GQPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQKKLQEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF+DF+KQ R + RMGS+ ++ MIPGM KI +++ E+ LK +EAMI +MT +ER
Sbjct: 326 TFDFSDFVKQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEQQLKRIEAMIGSMTQQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E P+LLA P RR+R+A SG V +++A +MR M+ +
Sbjct: 386 ENPDLLASQPSRRRRIASGSGHQAADVDKVLADFQKMRGFMQQM 429
>gi|123966680|ref|YP_001011761.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9515]
gi|123201046|gb|ABM72654.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9515]
Length = 492
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/345 (55%), Positives = 255/345 (73%), Gaps = 1/345 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG E S L ++ PTVIL+AGLQG GKTT + KL YLK++ K +LVA D+YRPAA++
Sbjct: 86 MGNENSPLFEKETPPTVILMAGLQGAGKTTATGKLGLYLKEKEKKVLLVAADIYRPAAVE 145
Query: 61 QLVILGEQVGVPVYTAG-TEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL +G Q + V++A + KP +IAK L A + NVD +IVDTAGRLQID+ MM E+
Sbjct: 146 QLKTIGNQYDLEVFSAKEKDSKPEEIAKDALIYANENNVDTLIVDTAGRLQIDELMMSEM 205
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K V NP EVLLVVD+M GQEAA L +F+ ++GI+GAILTKLDGDSRGGAALS++++
Sbjct: 206 VRIKEVTNPDEVLLVVDSMIGQEAADLTKSFHEKVGISGAILTKLDGDSRGGAALSIRKI 265
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
SGKPIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ DAE MQKK+
Sbjct: 266 SGKPIKFIGTGEKIEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADAEVMQKKLQE 325
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
A FDFNDF+KQ R + RMGS+ +I +IPGM KI ++ E+ LK +E+MI +MT EE
Sbjct: 326 ATFDFNDFVKQMRLMKRMGSLGGLIKLIPGMNKIDDGMIKNGEEQLKKIESMISSMTLEE 385
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
++KPE+LA P RR+R+AQ SG + V +++A +MR MK +
Sbjct: 386 KQKPEVLAAQPSRRQRIAQGSGYQAKDVDKVLADFQRMRGFMKQM 430
>gi|260435394|ref|ZP_05789364.1| signal recognition particle protein [Synechococcus sp. WH 8109]
gi|260413268|gb|EEX06564.1| signal recognition particle protein [Synechococcus sp. WH 8109]
Length = 486
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/344 (54%), Positives = 252/344 (73%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG+ + L A PTV+L+AGLQG GKTT +AKL +LK QG+ ++V DVYRPAAI+
Sbjct: 86 MGGDNAPLAKAAEAPTVVLMAGLQGAGKTTATAKLGLHLKDQGRRALMVGADVYRPAAIE 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LG Q+ V V++ G E KP IA GL +AK++ D ++VDTAGRLQID MM+E+
Sbjct: 146 QLKTLGAQIDVEVFSLGAEAKPEDIAAAGLAKAKEEGFDTLLVDTAGRLQIDTEMMEEMV 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++ + P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++VS
Sbjct: 206 RIRTAVQPDEVLLVVDSMIGQEAAELTRAFHDQVGITGAVLTKLDGDSRGGAALSIRKVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQKK+ A
Sbjct: 266 GQPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQKKLQEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF+DF+KQ R + RMGS+ ++ MIPGM KI +++ E+ LK +EAMI +MT +ER
Sbjct: 326 TFDFSDFVKQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEQQLKRIEAMIGSMTQQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E P+LLA P RR+R+A SG V +++A +MR M+ +
Sbjct: 386 ENPDLLASQPSRRRRIASGSGHQAADVDKVLADFQKMRGFMQQM 429
>gi|87301099|ref|ZP_01083940.1| signal recognition particle protein (SRP54) [Synechococcus sp. WH
5701]
gi|87284067|gb|EAQ76020.1| signal recognition particle protein (SRP54) [Synechococcus sp. WH
5701]
Length = 492
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/344 (53%), Positives = 254/344 (73%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGE + L A PTVIL+AGLQG GKTT +AKL +LK+QGK ++VA DVYRPAAID
Sbjct: 86 MGGENAPLAVADQAPTVILMAGLQGAGKTTATAKLGLHLKEQGKRALMVAADVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LG+Q+GV V++ G + +P IA G+ AK++ D V+VDTAGRLQID AMM+E+
Sbjct: 146 QLQTLGQQIGVEVFSLGADARPEDIAAAGIARAKEEGFDTVLVDTAGRLQIDTAMMEEMV 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+++ P EVLLVVD+M GQEAA L F+ ++G+TGA+LTKLDGDSRGGAALS+++VS
Sbjct: 206 RIRQAAAPDEVLLVVDSMIGQEAAELTRAFHEQVGLTGAVLTKLDGDSRGGAALSIRKVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKA + ++ D +MQ+K+ A
Sbjct: 266 GAPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKASKEVELADVAKMQQKLQEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
+FDF+DFL+Q R + RMGS+ ++ +IPGM KI +++ E+ L +EAMI +MT ER
Sbjct: 326 SFDFSDFLQQMRMIKRMGSLGGLMKLIPGMNKIDDGMLKQGEEQLGKIEAMIGSMTAAER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E+P+LLA P RR+R+A SG + V +++A +MR M+ +
Sbjct: 386 EQPQLLAAQPSRRRRIAAGSGHSPADVDKVLADFQKMRGFMQQM 429
>gi|126696809|ref|YP_001091695.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9301]
gi|126543852|gb|ABO18094.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9301]
Length = 492
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/345 (54%), Positives = 255/345 (73%), Gaps = 1/345 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG E S L ++ PTVIL+AGLQG GKTT + KL YLK++ K +LVA D+YRPAA++
Sbjct: 86 MGNENSPLNENENSPTVILMAGLQGAGKTTATGKLGLYLKEKDKKVLLVAADIYRPAAVE 145
Query: 61 QLVILGEQVGVPVYTAGTE-VKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG Q + V++A + KP +IAK+ L A + + + +I+DTAGRLQID +MM E+
Sbjct: 146 QLKTLGSQYELEVFSAKEKNSKPEEIAKEALNFANENDFNSIIIDTAGRLQIDDSMMSEM 205
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K V NP EVLLVVD+M GQEAA L +F+ ++GITGAILTKLDGDSRGGAALS++++
Sbjct: 206 VRIKEVSNPDEVLLVVDSMIGQEAADLTKSFHEKVGITGAILTKLDGDSRGGAALSIRKI 265
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
SGKPIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ DAE MQKK+
Sbjct: 266 SGKPIKFIGVGEKIEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADAEAMQKKLQE 325
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
A FDFNDF+KQ R + RMGS+ +I +IPGM KI +++ E LK +E+MI +MT EE
Sbjct: 326 ATFDFNDFVKQMRLIKRMGSLGGLIKLIPGMNKIDDGMIKDGEDQLKKIESMISSMTLEE 385
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
++KPE+LA P RR+R+AQ SG + V +++A +MR MK +
Sbjct: 386 KQKPEVLAAQPSRRQRIAQGSGYEAKDVDKVLADFQRMRGFMKQM 430
>gi|78779766|ref|YP_397878.1| signal recognition particle protein [Prochlorococcus marinus str.
MIT 9312]
gi|78713265|gb|ABB50442.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Prochlorococcus marinus str. MIT 9312]
Length = 489
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/345 (54%), Positives = 253/345 (73%), Gaps = 1/345 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG E S L +S PTVIL+AGLQG GKTT + KL YLK++ K +LVA D+YRPAA++
Sbjct: 86 MGNENSPLNENQSSPTVILMAGLQGAGKTTATGKLGLYLKEKDKKVLLVAADIYRPAAVE 145
Query: 61 QLVILGEQVGVPVYTAGTE-VKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG Q + V++A + KP +I K L A + N + +I+DTAGRLQID +MM E+
Sbjct: 146 QLKTLGSQYDLEVFSAKEKNSKPEEITKDALNYANENNFNSIIIDTAGRLQIDDSMMSEM 205
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K V NP EVLLVVD+M GQEAA L +F+ ++GI+GAILTKLDGDSRGGAALS++++
Sbjct: 206 VRIKEVSNPDEVLLVVDSMIGQEAADLTKSFHEKVGISGAILTKLDGDSRGGAALSIRKI 265
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
SGKPIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ DAE MQKK+
Sbjct: 266 SGKPIKFIGVGEKIEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADAEVMQKKLQE 325
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
A FDFNDF+KQ R + RMGS+ +I +IPGM KI +++ E LK +E+MI +MT EE
Sbjct: 326 ATFDFNDFVKQMRLIKRMGSLGGLIKLIPGMNKIDDGMIKDGEYQLKKIESMISSMTLEE 385
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
++KPE+LA P RR+R+AQ SG + V +++A +MR MK +
Sbjct: 386 KQKPEVLAAQPSRRQRIAQGSGYEAKDVDKVLADFQRMRGFMKQM 430
>gi|123969017|ref|YP_001009875.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. AS9601]
gi|123199127|gb|ABM70768.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. AS9601]
Length = 498
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/345 (54%), Positives = 254/345 (73%), Gaps = 1/345 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG E S L + PTVIL+AGLQG GKTT + KL YLK++ K +LVA D+YRPAA++
Sbjct: 86 MGNENSPLNENEKSPTVILMAGLQGAGKTTATGKLGLYLKEKDKKVLLVAADIYRPAAVE 145
Query: 61 QLVILGEQVGVPVYTAGTE-VKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG Q + V++A + KP +IAK+ L A + + + +I+DTAGRLQID +MM E+
Sbjct: 146 QLKTLGSQYELEVFSAKEKNSKPEEIAKEALNFANENDFNSIIIDTAGRLQIDDSMMSEM 205
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K V NP E+LLVVD+M GQEAA L +F+ ++GITGAILTKLDGDSRGGAALS++++
Sbjct: 206 VRIKEVSNPDEILLVVDSMIGQEAADLTKSFHEKVGITGAILTKLDGDSRGGAALSIRKI 265
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
SGKPIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ DAE MQKK+
Sbjct: 266 SGKPIKFIGVGEKIEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADAEAMQKKLQE 325
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
A FDFNDF+KQ R + RMGS+ +I +IPGM KI +++ E LK +E+MI +MT EE
Sbjct: 326 ATFDFNDFVKQMRLIKRMGSLGGLIKLIPGMNKIDDGMIKDGEDQLKKIESMISSMTLEE 385
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
++KPE+LA P RR+R+AQ SG + V +++A +MR MK +
Sbjct: 386 KQKPEVLAAHPSRRQRIAQGSGYEAKDVDKVLADFQRMRGFMKQM 430
>gi|157413847|ref|YP_001484713.1| signal recognition particle protein [Prochlorococcus marinus str.
MIT 9215]
gi|157388422|gb|ABV51127.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9215]
Length = 492
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/345 (54%), Positives = 254/345 (73%), Gaps = 1/345 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG E S L K+ PTVIL+AGLQG GKTT + KL YLK++ K +LVA D+YRPAA++
Sbjct: 86 MGNENSPLNENKNSPTVILMAGLQGAGKTTATGKLGLYLKEKDKKVLLVAADIYRPAAVE 145
Query: 61 QLVILGEQVGVPVYTAGTE-VKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG Q + V++A + KP IAK L A++ + + +I+DTAGRLQID +MM E+
Sbjct: 146 QLKTLGSQYDLEVFSAKEKNCKPEVIAKDALNFARENDFNSIIIDTAGRLQIDDSMMSEM 205
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K V NP EVLLVVD+M GQEAA L +F+ ++GI+GAILTKLDGDSRGGAALS++++
Sbjct: 206 VRIKEVSNPDEVLLVVDSMIGQEAADLTKSFHEKVGISGAILTKLDGDSRGGAALSIRKI 265
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
SGKPIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ DAE MQ+K+
Sbjct: 266 SGKPIKFIGVGEKIEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADAEAMQRKLQE 325
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
A FDFNDF+KQ R + RMGS+ +I +IPGM KI +++ E LK +E+MI +MT EE
Sbjct: 326 ATFDFNDFVKQMRLIKRMGSLGGLIKLIPGMNKIDDGMIKDGEDQLKKIESMISSMTLEE 385
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
++KPE+LA P RR+R+AQ SG + V +++A +MR MK +
Sbjct: 386 KQKPEVLAAQPSRRQRIAQGSGYEAKDVDKVLADFQRMRGFMKQM 430
>gi|145341290|ref|XP_001415746.1| IISP family transporter: signal recognition particle protein
(SRP54) [Ostreococcus lucimarinus CCE9901]
gi|144575969|gb|ABO94038.1| IISP family transporter: signal recognition particle protein
(SRP54) [Ostreococcus lucimarinus CCE9901]
Length = 498
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/376 (52%), Positives = 265/376 (70%), Gaps = 12/376 (3%)
Query: 15 PTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 74
PTV+L+AGLQGVGKTT KL+ L+KQGKS +LVA DVYRPAAIDQL LG+Q+GVPV+
Sbjct: 107 PTVVLMAGLQGVGKTTACGKLSLALRKQGKSVLLVATDVYRPAAIDQLKTLGKQIGVPVF 166
Query: 75 TAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLV 134
G + P +IA +G+ +AK +++DVVIVDTAGRL ID+ +M ELK K + E LLV
Sbjct: 167 DMGVDGNPPEIAARGVRKAKDEDIDVVIVDTAGRLNIDEKLMGELKATKEATSADETLLV 226
Query: 135 VDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERME 194
VDAMTGQEAA L +FN + ITGAILTK+DGD+RGGAALSV+EVSGKPIK G GE+M+
Sbjct: 227 VDAMTGQEAATLTASFNEAVEITGAILTKMDGDTRGGAALSVREVSGKPIKFTGVGEKMD 286
Query: 195 DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTV 254
LEPFYP+RM RILGMGD++S VEK Q +++E+AE++++KIMSA FDFNDF+ Q +
Sbjct: 287 ALEPFYPERMTSRILGMGDIVSLVEKVQAGVKEEEAEKIKQKIMSATFDFNDFVGQLEMM 346
Query: 255 ARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPV--- 311
MG M +++ M+PG K++ A + A KS+ I +++I +MT EER+ P++L S
Sbjct: 347 NNMGGMKQIMQMMPGTAKLSEADMEAAGKSMTIAKSLINSMTKEERQYPDMLVASTTADS 406
Query: 312 RRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG-----GSLPALSNLEDAL--- 363
RR+R+ + SG+TE ++QL+ MR +M+ + G + G G P LS E +
Sbjct: 407 RRQRIVKGSGRTEADLAQLIMMFGGMRTQMQKMSGQLGGQAGDVGLQPQLSEAELSKLAM 466
Query: 364 -KSEQKAPPGTARRKR 378
K + PG RR++
Sbjct: 467 NKIRKTVKPGMVRRQK 482
>gi|33861842|ref|NP_893403.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
gi|33640210|emb|CAE19745.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
Length = 498
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/345 (54%), Positives = 255/345 (73%), Gaps = 1/345 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG E S L ++ PTVIL+AGLQG GKTT + KL YLK++ + +LVA D+YRPAA++
Sbjct: 86 MGNENSPLNKKETTPTVILMAGLQGAGKTTATGKLGLYLKEKEEKVLLVAADIYRPAAVE 145
Query: 61 QLVILGEQVGVPVYTAGTE-VKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL +G Q + V++A + KP +IA+ L A N+D +IVDTAGRLQID++MM E+
Sbjct: 146 QLKTIGNQYDLEVFSAKEKNSKPEEIARDALSYANANNIDTLIVDTAGRLQIDESMMGEM 205
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K+V P EVLLVVD+M GQEAA L +F+ ++GITGAILTKLDGDSRGGAALS++++
Sbjct: 206 VRIKQVTKPDEVLLVVDSMIGQEAADLTKSFHEKVGITGAILTKLDGDSRGGAALSIRKI 265
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
SGKPIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ DAE MQKK+
Sbjct: 266 SGKPIKFIGTGEKIEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADAEVMQKKLQE 325
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
A FDFNDF+KQ R + RMGS+ +I +IPGM KI ++ E+ LK +E+MI +MT EE
Sbjct: 326 ATFDFNDFVKQMRLMKRMGSLGGLIKLIPGMNKIDDGMIKNGEEQLKKIESMISSMTLEE 385
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
++KPE+LA P RR+R+AQ SG + V +++A +MR MK +
Sbjct: 386 KQKPEVLAAQPSRRQRIAQGSGYQAKDVDKVLADFQRMRGFMKQM 430
>gi|113955128|ref|YP_729980.1| signal recognition particle protein [Synechococcus sp. CC9311]
gi|113882479|gb|ABI47437.1| signal recognition particle protein [Synechococcus sp. CC9311]
Length = 493
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/344 (54%), Positives = 251/344 (72%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG + L A PTV+L+AGLQG GKTT +AKL +LK QG+ ++V DVYRPAAI+
Sbjct: 86 MGGGNAPLAQADQAPTVVLMAGLQGAGKTTATAKLGLHLKDQGRKALMVGADVYRPAAIE 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LG Q+GV V++ G E KP IA GL +AK++ D ++VDTAGRLQID MM+E+
Sbjct: 146 QLKTLGGQIGVDVFSLGIEAKPEDIAAAGLAKAKEEGYDTLLVDTAGRLQIDSEMMEEMV 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++ + P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++VS
Sbjct: 206 RIRSAVQPDEVLLVVDSMIGQEAAELTRAFHDQVGITGAVLTKLDGDSRGGAALSIRKVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQKK+ A
Sbjct: 266 GQPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQKKLQEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
+FDF+DFL+Q R + RMGS+ ++ MIPGM KI +++ E+ LK +EAMI +MT ER
Sbjct: 326 SFDFSDFLQQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEQQLKKIEAMIGSMTAAER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+PELLA P RR+R+A G V +++A +MR M+ +
Sbjct: 386 TQPELLAAQPSRRRRIASGCGYQAADVDKVLADFQKMRGFMQQM 429
>gi|318042117|ref|ZP_07974073.1| signal recognition particle protein [Synechococcus sp. CB0101]
Length = 487
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/346 (53%), Positives = 253/346 (73%), Gaps = 2/346 (0%)
Query: 1 MGGEVSELVFAK--SRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAA 58
MGGE + L P+V+L+AGLQG GKTT +AKL +LK+QG+ +LV DVYRPAA
Sbjct: 86 MGGENAPLAAGGKPGEPSVVLMAGLQGAGKTTATAKLGLHLKEQGRKALLVGADVYRPAA 145
Query: 59 IDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDE 118
IDQL LG Q+GV V++ GT+ KP IA G+E+AK + D V+VDTAGRLQID++MM+E
Sbjct: 146 IDQLKTLGGQIGVEVFSLGTDAKPEAIAAAGIEKAKAEGFDTVLVDTAGRLQIDESMMEE 205
Query: 119 LKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKE 178
+ ++ +P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++
Sbjct: 206 MVRIREACSPDEVLLVVDSMIGQEAAELTRAFHDQVGITGAVLTKLDGDSRGGAALSIRK 265
Query: 179 VSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIM 238
VSG PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D +MQ+K+
Sbjct: 266 VSGAPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVAKMQQKLQ 325
Query: 239 SANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPE 298
A FDF+DF++Q R + RMGS+ ++ +IPGM KI +++ E+ LK +EAMI +MT
Sbjct: 326 EATFDFSDFVQQMRLIKRMGSLGGLMKLIPGMNKIDDGMLKQGEEQLKKIEAMISSMTEA 385
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P+LLA +P RR+R+A SG T V +++ QMR M+ +
Sbjct: 386 ERRDPDLLAANPSRRRRIASGSGHTSADVDKVLQNFQQMRGFMQQM 431
>gi|254525556|ref|ZP_05137608.1| signal recognition particle protein [Prochlorococcus marinus str.
MIT 9202]
gi|221536980|gb|EEE39433.1| signal recognition particle protein [Prochlorococcus marinus str.
MIT 9202]
Length = 486
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/345 (54%), Positives = 253/345 (73%), Gaps = 1/345 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG E S L ++ PTVIL+AGLQG GKTT + KL YLK + K +LVA D+YRPAA++
Sbjct: 86 MGNENSPLNENENSPTVILMAGLQGAGKTTATGKLGLYLKAKDKKVLLVAADIYRPAAVE 145
Query: 61 QLVILGEQVGVPVYTAGTE-VKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG Q + V++A + KP IAK L A++ + + +I+DTAGRLQID +MM E+
Sbjct: 146 QLKTLGSQYDLEVFSAKEKNCKPEVIAKDALNFARENDFNSIIIDTAGRLQIDDSMMSEM 205
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K V NP EVLLVVD+M GQEAA L +F+ ++GI+GAILTKLDGDSRGGAALS++++
Sbjct: 206 VRIKEVSNPDEVLLVVDSMIGQEAADLTKSFHEKVGISGAILTKLDGDSRGGAALSIRKI 265
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
SGKPIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ DAE MQ+K+
Sbjct: 266 SGKPIKFIGVGEKIEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADAEAMQRKLQE 325
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
A FDFNDF+KQ R + RMGS+ +I +IPGM KI +++ E LK +E+MI +MT EE
Sbjct: 326 ATFDFNDFVKQMRLIKRMGSLGGLIKLIPGMNKIDDGMIKDGEDQLKKIESMISSMTLEE 385
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
++KPE+LA P RR+R+AQ SG + V +++A +MR MK +
Sbjct: 386 KQKPEVLAAQPSRRQRIAQGSGYEAKDVDKVLADFQRMRGFMKQM 430
>gi|427702484|ref|YP_007045706.1| signal recognition particle protein [Cyanobium gracile PCC 6307]
gi|427345652|gb|AFY28365.1| signal recognition particle protein [Cyanobium gracile PCC 6307]
Length = 496
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/344 (54%), Positives = 249/344 (72%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG + L A PTVIL+AGLQG GKTT +AKL +LK+QG+ +LVA DVYRPAAID
Sbjct: 86 MGGANAPLARAAEGPTVILMAGLQGAGKTTATAKLGLHLKEQGRRPLLVAADVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LG Q+GV V++ G+E P IA G+ +++ D V+VDTAGRLQID AMM E+
Sbjct: 146 QLQTLGRQIGVEVFSLGSEASPEAIAAAGVARGREEGFDTVLVDTAGRLQIDTAMMGEMV 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++ P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++VS
Sbjct: 206 RIREAAAPDEVLLVVDSMIGQEAADLTRAFHEQVGITGAVLTKLDGDSRGGAALSIRKVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKA + ++ D E+MQ+K+ A
Sbjct: 266 GAPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKATKEVELADVEKMQRKLQEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
+FDF+DF++Q R + RMGS+ ++ +IPGM KI +R+ E LK +EAMI +MT ER
Sbjct: 326 SFDFSDFVQQMRLIKRMGSLGGLMKLIPGMNKIDDGMLRQGESQLKRIEAMIGSMTEAER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+PELLA P RR+R+A SG T V +++A +MR M+ +
Sbjct: 386 RQPELLAAQPSRRRRIAAGSGHTPADVDKVLADFQKMRGFMQQM 429
>gi|352096234|ref|ZP_08957114.1| signal recognition particle protein [Synechococcus sp. WH 8016]
gi|351676928|gb|EHA60079.1| signal recognition particle protein [Synechococcus sp. WH 8016]
Length = 496
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/344 (53%), Positives = 251/344 (72%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG + L A PTV+L+AGLQG GKTT +AKL +LK QG+ ++V DVYRPAAI+
Sbjct: 86 MGGGNAPLAKADQAPTVVLMAGLQGAGKTTATAKLGLHLKDQGRKALMVGADVYRPAAIE 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LG Q+GV V++ G E KP IA GL +AK++ D ++VDTAGRLQID MM+E+
Sbjct: 146 QLKTLGGQIGVDVFSLGIEAKPEDIAAAGLAKAKQEGYDTLLVDTAGRLQIDSEMMEEMV 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++ + P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++VS
Sbjct: 206 RIRGAVQPDEVLLVVDSMIGQEAAELTRAFHDQVGITGAVLTKLDGDSRGGAALSIRKVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQKK+ A
Sbjct: 266 GQPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQKKLQEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
+FDF+DF++Q R + RMGS+ ++ MIPGM KI +++ E+ LK +EAMI +MT ER
Sbjct: 326 SFDFSDFVQQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEQQLKKIEAMIGSMTEAER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+PELLA P RR+R+A G V +++A +MR M+ +
Sbjct: 386 TQPELLAAQPSRRRRIASGCGYQAADVDKVLADFQKMRGVMQQM 429
>gi|116073373|ref|ZP_01470635.1| signal recognition particle protein [Synechococcus sp. RS9916]
gi|116068678|gb|EAU74430.1| signal recognition particle protein [Synechococcus sp. RS9916]
Length = 499
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/344 (53%), Positives = 252/344 (73%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG + L A PTV+L+AGLQG GKTT +AKL +LK QG+ ++V DVYRPAAI+
Sbjct: 86 MGGGNAPLAKADQAPTVVLMAGLQGAGKTTATAKLGLHLKDQGRRALMVGADVYRPAAIE 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LGEQ+ V V++ G E KP IA GL +AK++ D ++VDTAGRLQID +MM+E+
Sbjct: 146 QLRTLGEQIDVEVFSLGAEAKPEDIAAAGLAKAKEEGFDTLLVDTAGRLQIDTSMMEEMV 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++ + P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++VS
Sbjct: 206 RIRTAVQPDEVLLVVDSMIGQEAAELTRAFHEQVGITGAVLTKLDGDSRGGAALSIRKVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQKK+ A
Sbjct: 266 GQPIKFMGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQKKLQEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
+FDF+DFL+Q R + RMGS+ ++ MIPGM K+ +++ E+ LK +EAMI +MT ER
Sbjct: 326 SFDFSDFLQQMRLIKRMGSLGGLMKMIPGMNKLDDGMLKQGEQQLKKIEAMIGSMTAAER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+PELLA P RR+R+A G V +++A +MR M+ +
Sbjct: 386 TQPELLAAQPSRRRRIAAGCGYQPADVDKVLADFQKMRGFMQQM 429
>gi|317969124|ref|ZP_07970514.1| signal recognition particle protein [Synechococcus sp. CB0205]
Length = 488
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 185/346 (53%), Positives = 253/346 (73%), Gaps = 2/346 (0%)
Query: 1 MGGEVSELVFA--KSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAA 58
MGGE + L A + P V+L+AGLQG GKTT +AKL +LK++G+ +LV DVYRPAA
Sbjct: 86 MGGENAPLAPAGKEGAPAVVLMAGLQGAGKTTATAKLGLHLKEKGRRALLVGADVYRPAA 145
Query: 59 IDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDE 118
I+QL LG Q+GV V++ GT+ KP IA G+E+AK + D V+VDTAGRLQID +MM+E
Sbjct: 146 IEQLKTLGGQIGVEVFSLGTDAKPEAIAAAGIEKAKAEGFDTVLVDTAGRLQIDTSMMEE 205
Query: 119 LKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKE 178
+ ++ + P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++
Sbjct: 206 MVRIREAVQPDEVLLVVDSMIGQEAAELTRAFHDQVGITGAVLTKLDGDSRGGAALSIRK 265
Query: 179 VSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIM 238
VSG PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D +MQ+K+
Sbjct: 266 VSGAPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVAKMQQKLQ 325
Query: 239 SANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPE 298
A FDF+DF+KQ R + RMGS+ ++ MIPGM KI +++ E+ LK +EAM+ +MT
Sbjct: 326 EATFDFSDFIKQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEEQLKKIEAMVGSMTEA 385
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P+LLA +P RR+R+A SG T V +++ QMR M+ +
Sbjct: 386 ERCDPDLLAANPSRRRRIASGSGHTPADVDKVLQNFQQMRGFMQQM 431
>gi|254432051|ref|ZP_05045754.1| signal recognition particle protein [Cyanobium sp. PCC 7001]
gi|197626504|gb|EDY39063.1| signal recognition particle protein [Cyanobium sp. PCC 7001]
Length = 494
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 183/346 (52%), Positives = 255/346 (73%), Gaps = 2/346 (0%)
Query: 1 MGGEVSELVFA--KSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAA 58
MGGE + L P+V+L+AGLQG GKTT +AKL +LK+QG+ +LV DVYRPAA
Sbjct: 86 MGGENAPLAAGGKPGEPSVVLMAGLQGAGKTTATAKLGLHLKEQGRRALLVGADVYRPAA 145
Query: 59 IDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDE 118
I+QL LG Q+GV V++ GTE +P IA G+E+A+++ D V+VDTAGRLQID +MM+E
Sbjct: 146 IEQLRTLGGQIGVEVFSLGTEARPEDIAAAGVEKAREEGFDTVLVDTAGRLQIDTSMMEE 205
Query: 119 LKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKE 178
+ ++ + P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++
Sbjct: 206 MVRIREAVQPDEVLLVVDSMIGQEAAELTRAFHEQVGITGAVLTKLDGDSRGGAALSIRK 265
Query: 179 VSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIM 238
VSG PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D MQ+K+
Sbjct: 266 VSGAPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVARMQQKLQ 325
Query: 239 SANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPE 298
A+FDF+DF++Q R + RMGS+ ++ MIPGM KI +++ E+ L +E+MI +MT
Sbjct: 326 EASFDFSDFVQQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEQQLGKIESMISSMTAA 385
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ERE P+LLA P RR+R+A+ SG T +V +++A +MR M+ +
Sbjct: 386 ERENPDLLALMPSRRRRIAKGSGHTPAEVDKVLADFQRMRGFMQQM 431
>gi|78042676|ref|YP_360266.1| signal recognition particle protein [Carboxydothermus
hydrogenoformans Z-2901]
gi|77994791|gb|ABB13690.1| signal recognition particle protein [Carboxydothermus
hydrogenoformans Z-2901]
Length = 446
Score = 367 bits (941), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 190/347 (54%), Positives = 252/347 (72%), Gaps = 3/347 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG ++L A S PT+I+L GLQG GKTT +AKLA LKKQGK +LVA DVYRPAAI
Sbjct: 87 MGKTNAKLNDAGSPPTIIMLVGLQGAGKTTTAAKLAYLLKKQGKKPLLVAADVYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+ + VPV+T G E P IAK + AK + VI+DTAGRL I++ +MDELK
Sbjct: 147 QLQVLGDTIDVPVFTMG-EQSPVDIAKASINFAKSNLKNYVIIDTAGRLHINEELMDELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K V++P E+LLVVDAMTGQ+A + +FN E+G+TG ILTKLDGD++GGAALSVK V+
Sbjct: 206 KIKDVVHPHEILLVVDAMTGQDAVNVAKSFNDELGLTGVILTKLDGDTKGGAALSVKAVT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK G GE++E+LEPFYPDRMA RILGMGDVL+ +EKA+E + E A++MQ+K+ S
Sbjct: 266 GCPIKFAGMGEKIENLEPFYPDRMASRILGMGDVLTLIEKAKEALDAEKAQKMQEKLKSR 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FD DFL + + +MG + +++GMIPGMGK+ EK LK +EA+I +MTPEER
Sbjct: 326 EFDLEDFLDSMQQIKKMGPLEQLLGMIPGMGKVKDIAGMVDEKELKHIEAIIYSMTPEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
KPE++ S R+KR+A+ SG + Q+V++L+ Q QM+ MK G+
Sbjct: 386 RKPEIIDGS--RKKRIAKGSGTSIQEVNRLLKQFEQMKKLMKQFGGM 430
>gi|392529142|ref|ZP_10276279.1| signal recognition particle protein [Carnobacterium maltaromaticum
ATCC 35586]
Length = 474
Score = 366 bits (940), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 182/361 (50%), Positives = 259/361 (71%), Gaps = 8/361 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S + A PTVI++ GLQG GKTT + KLAN+L KKQ + +LVA D+YRPAAI
Sbjct: 87 MGGEQSTIQSAPKSPTVIMMVGLQGAGKTTTAGKLANFLRKKQNRRPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LGEQ+ +PV++ G +V P +IAK G+E+AK++++D VI+DTAGRL ID+ +M EL
Sbjct: 147 QQLETLGEQLDIPVFSMGDQVSPVEIAKMGIEKAKEEHLDFVIIDTAGRLHIDETLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
D+K V NPTE+ LVVDAMTGQ+A + +FN ++ ITG ILTKLDGD+RGGAALS++ V
Sbjct: 207 TDIKAVTNPTEIFLVVDAMTGQDAVNVAESFNEQLDITGVILTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G+GE++EDLEPFYPDRMA RILGMGD+L+ +EKAQ+ ++ AEEM +K+
Sbjct: 267 TGKPIKFTGQGEKLEDLEPFYPDRMASRILGMGDMLTLIEKAQQDFDEKKAEEMTQKMQD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE-KSLKIMEAMIEAMTPE 298
+FDFNDF++Q + MG + ++ MIPGM + + + K M+A++ +MTP+
Sbjct: 327 NSFDFNDFIEQMDQLNNMGPIEDILKMIPGMNNVPGLDKMQIDPKDTARMKAIVLSMTPQ 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSN 358
ERE P+LL++S RR+R+A+ SG+ +V++++ Q + K +M M G+ +
Sbjct: 387 ERENPDLLSQS--RRRRIARGSGRPIAEVNRMIKQFNE----SKKMMSQMSKGNFNGMDG 440
Query: 359 L 359
+
Sbjct: 441 M 441
>gi|414083599|ref|YP_006992307.1| signal recognition particle protein [Carnobacterium maltaromaticum
LMA28]
gi|412997183|emb|CCO10992.1| signal recognition particle protein [Carnobacterium maltaromaticum
LMA28]
Length = 494
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 182/361 (50%), Positives = 259/361 (71%), Gaps = 8/361 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S + A PTVI++ GLQG GKTT + KLAN+L KKQ + +LVA D+YRPAAI
Sbjct: 87 MGGEQSTIQSAPKSPTVIMMVGLQGAGKTTTAGKLANFLRKKQNRRPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LGEQ+ +PV++ G +V P +IAK G+E+AK++++D VI+DTAGRL ID+ +M EL
Sbjct: 147 QQLETLGEQLDIPVFSMGDQVSPVEIAKMGIEKAKEEHLDFVIIDTAGRLHIDETLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
D+K V NPTE+ LVVDAMTGQ+A + +FN ++ ITG ILTKLDGD+RGGAALS++ V
Sbjct: 207 TDIKAVTNPTEIFLVVDAMTGQDAVNVAESFNEQLDITGVILTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G+GE++EDLEPFYPDRMA RILGMGD+L+ +EKAQ+ ++ AEEM +K+
Sbjct: 267 TGKPIKFTGQGEKLEDLEPFYPDRMASRILGMGDMLTLIEKAQQDFDEKKAEEMTQKMQD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE-KSLKIMEAMIEAMTPE 298
+FDFNDF++Q + MG + ++ MIPGM + + + K M+A++ +MTP+
Sbjct: 327 NSFDFNDFIEQMDQLNNMGPIEDILKMIPGMNNVPGLDKMQIDPKDTARMKAIVLSMTPQ 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSN 358
ERE P+LL++S RR+R+A+ SG+ +V++++ Q + K +M M G+ +
Sbjct: 387 ERENPDLLSQS--RRRRIARGSGRPIAEVNRMIKQFNE----SKKMMSQMSKGNFNGMDG 440
Query: 359 L 359
+
Sbjct: 441 M 441
>gi|148240067|ref|YP_001225454.1| Signal recognition particle protein [Synechococcus sp. WH 7803]
gi|147848606|emb|CAK24157.1| Signal recognition particle protein [Synechococcus sp. WH 7803]
Length = 523
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 185/344 (53%), Positives = 255/344 (74%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG + L A++ PTV+L+AGLQG GKTT +AKL +LK QG+ ++V DVYRPAAI+
Sbjct: 115 MGGGNAPLAQAETAPTVVLMAGLQGAGKTTATAKLGLHLKDQGRRALMVGADVYRPAAIE 174
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LG Q+GV V++ G + KP IA GL +AK++ D ++VDTAGRLQID MM+E+
Sbjct: 175 QLKTLGGQIGVEVFSLGADAKPEAIAAAGLAKAKEEGFDTLLVDTAGRLQIDSEMMEEMV 234
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++ + P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++VS
Sbjct: 235 RIRTAVQPDEVLLVVDSMIGQEAAELTRAFHEQVGITGAVLTKLDGDSRGGAALSIRKVS 294
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQKK+ A
Sbjct: 295 GQPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQKKLQEA 354
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF+DF++Q R + RMGS+ ++ MIPGM KI +++ E+ LK +EAMI +MT +ER
Sbjct: 355 TFDFSDFVQQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEQQLKKIEAMIGSMTQQER 414
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E P+LLA P RR+R+A+ SG V +++A +MR M+ +
Sbjct: 415 ENPDLLAGQPSRRRRIARGSGHQPADVDKVLADFQKMRGFMQQM 458
>gi|116072341|ref|ZP_01469608.1| Signal recognition particle protein [Synechococcus sp. BL107]
gi|116064863|gb|EAU70622.1| Signal recognition particle protein [Synechococcus sp. BL107]
Length = 486
Score = 363 bits (933), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 186/344 (54%), Positives = 252/344 (73%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG+ + L A PTV+L+AGLQG GKTT +AKL +LK QG+ ++V DVYRPAAI+
Sbjct: 86 MGGDNAPLARASETPTVVLMAGLQGAGKTTATAKLGLHLKDQGRRSLMVGADVYRPAAIE 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LG Q+GV V++ GT+ KP +IA GL +AK + D ++VDTAGRLQID MM E+
Sbjct: 146 QLKTLGGQIGVDVFSLGTDAKPEEIAAAGLAKAKAEGYDTLLVDTAGRLQIDTEMMGEMV 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++ + P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++VS
Sbjct: 206 RIRSAVQPDEVLLVVDSMIGQEAAELTRAFHEQVGITGAVLTKLDGDSRGGAALSIRKVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQKK+ A
Sbjct: 266 GQPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQKKLQEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
+FDF+DFL+Q R + RMGS+ ++ MIPGM KI +++ E LK +EAMI +MT ER
Sbjct: 326 SFDFSDFLQQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEDQLKRVEAMIGSMTESER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+PELL+ P RR+R+A SG V +++A +MR M+ +
Sbjct: 386 CQPELLSSQPSRRRRIAAGSGHQPADVDKVLADFQKMRGFMQQM 429
>gi|78185084|ref|YP_377519.1| Signal recognition particle protein [Synechococcus sp. CC9902]
gi|78169378|gb|ABB26475.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus sp. CC9902]
Length = 492
Score = 363 bits (932), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 186/344 (54%), Positives = 252/344 (73%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG+ + L A PTV+L+AGLQG GKTT +AKL +LK QG+ ++V DVYRPAAI+
Sbjct: 86 MGGDNAPLARASEAPTVVLMAGLQGAGKTTATAKLGLHLKDQGRRSLMVGADVYRPAAIE 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LG Q+GV V++ GT+ KP +IA GL +AK + D ++VDTAGRLQID MM E+
Sbjct: 146 QLKTLGGQIGVDVFSLGTDAKPEEIAAAGLAKAKAEGYDTLLVDTAGRLQIDTEMMGEMV 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++ + P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++VS
Sbjct: 206 RIRSAVQPDEVLLVVDSMIGQEAAELTRAFHEQVGITGAVLTKLDGDSRGGAALSIRKVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VE+AQ+ ++ D E+MQKK+ A
Sbjct: 266 GQPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVERAQKEVELADVEKMQKKLQEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
+FDF+DFL+Q R + RMGS+ ++ MIPGM KI +++ E LK +EAMI +MT ER
Sbjct: 326 SFDFSDFLQQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEDQLKRVEAMIGSMTESER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+PELLA P RR+R+A SG V +++A +MR M+ +
Sbjct: 386 CQPELLASQPSRRRRIATGSGHQPADVDKVLADFQKMRGFMQQM 429
>gi|124359737|gb|ABN06079.1| Signal peptide binding (SRP54) M-domain [Medicago truncatula]
Length = 210
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 176/209 (84%), Positives = 197/209 (94%), Gaps = 1/209 (0%)
Query: 193 MEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTR 252
MEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAE++QKKIMSA FDFNDFLKQTR
Sbjct: 1 MEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEDLQKKIMSAKFDFNDFLKQTR 60
Query: 253 TVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVR 312
VA+MGS+SRVIGMIPGM K+TPAQ+REAE++L+IME +I+AMTPEEREKPELLAESPVR
Sbjct: 61 AVAQMGSVSRVIGMIPGMAKVTPAQIREAERNLEIMEVIIKAMTPEEREKPELLAESPVR 120
Query: 313 RKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAPPG 372
RKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS+P LSNLE+ALK+E+KAPPG
Sbjct: 121 RKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSMPTLSNLEEALKTEEKAPPG 180
Query: 373 TARRKRRSESRRQFVDPASTRPSPRGFGG 401
TARR++++ESRR F D ++ R PRGFG
Sbjct: 181 TARRRKKAESRRLFAD-STLRQPPRGFGS 208
>gi|88809131|ref|ZP_01124640.1| signal recognition particle protein (SRP54) [Synechococcus sp. WH
7805]
gi|88787073|gb|EAR18231.1| signal recognition particle protein (SRP54) [Synechococcus sp. WH
7805]
Length = 489
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 185/344 (53%), Positives = 254/344 (73%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG + L A+ PTV+L+AGLQG GKTT +AKL +LK QG+ ++V DVYRPAAI+
Sbjct: 86 MGGGNAPLAQAEEAPTVVLMAGLQGAGKTTATAKLGLHLKDQGRRALMVGADVYRPAAIE 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LG Q+GV V++ G + KP IA GL +AK++ D ++VDTAGRLQID MM+E+
Sbjct: 146 QLKTLGGQIGVEVFSLGADAKPEAIAAAGLAKAKEEGFDTLLVDTAGRLQIDTEMMEEMV 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++ + P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++VS
Sbjct: 206 RIRTAVQPDEVLLVVDSMIGQEAAELTRAFHEQVGITGAVLTKLDGDSRGGAALSIRKVS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQKK+ A
Sbjct: 266 GQPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQKKLQEA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF+DF++Q R + RMGS+ ++ MIPGM KI +++ E+ LK +EAMI +MT +ER
Sbjct: 326 TFDFSDFVQQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEQQLKKIEAMIGSMTQQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E P+LLA P RR+R+A+ SG V +++A +MR M+ +
Sbjct: 386 ENPDLLAGQPSRRRRIARGSGHQPADVDKVLADFQKMRGFMQQM 429
>gi|392964046|ref|ZP_10329467.1| signal recognition particle protein [Fibrisoma limi BUZ 3]
gi|387846941|emb|CCH51511.1| signal recognition particle protein [Fibrisoma limi BUZ 3]
Length = 439
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 186/353 (52%), Positives = 248/353 (70%), Gaps = 4/353 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGE ++ + K P V+L+AGLQG GKTT S KLA+YLKKQG++ +LVA D+YRPAAID
Sbjct: 86 MGGE-AQSINIKGEPAVVLIAGLQGSGKTTFSGKLASYLKKQGRNVLLVAADIYRPAAID 144
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQVGV VY QIA+ G+ +A+K VVIVDTAGRL +D+AMM E++
Sbjct: 145 QLKVLGEQVGVEVYAEPENKNAVQIAQNGIAQARKTGKKVVIVDTAGRLAVDEAMMQEIE 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+VKR ++PTE L VVD+MTGQ+A TFN + G +LTKLDGD+RGGAALS+K V
Sbjct: 205 NVKRAISPTETLFVVDSMTGQDAVNTAKTFNDRLNFDGVVLTKLDGDARGGAALSIKTVV 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK + GE+ME L+ FYPDRMA RILGMGDV+S VE+AQ+ +++A+ + K+
Sbjct: 265 NKPIKFISTGEKMEALDVFYPDRMASRILGMGDVISLVERAQQAFDEDEAKRINAKMRKN 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFL Q + + +MG++ ++GMIPGMGK+ + S K +EA+I +MTP+ER
Sbjct: 325 QFDFNDFLSQLQQIKKMGNVKDLLGMIPGMGKMIK-DLDIDNDSFKPIEAIISSMTPKER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 353
E+PEL+ S R+KR+A SG QQV+ L+ Q +MR MK + + G L
Sbjct: 384 ERPELIDGS--RKKRIAAGSGTDIQQVNNLLKQFDEMRKMMKKMNTMQASGKL 434
>gi|326791391|ref|YP_004309212.1| signal recognition particle protein [Clostridium lentocellum DSM
5427]
gi|326542155|gb|ADZ84014.1| signal recognition particle protein [Clostridium lentocellum DSM
5427]
Length = 446
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 183/350 (52%), Positives = 255/350 (72%), Gaps = 4/350 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S++ FA TVI++ GLQG GKTT SAKL++++K QGK +LVA DVYRPAAID
Sbjct: 87 MGSTQSKINFAPRGITVIMMVGLQGAGKTTTSAKLSSHIKSQGKRPLLVACDVYRPAAID 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +G+QV VPV++ G++ P IA+ G+ AK+ N+DVVI+DTAGRL ID+ +MDELK
Sbjct: 147 QLTKVGKQVNVPVFSMGSDKNPVDIAQAGVNYAKENNLDVVIIDTAGRLHIDEVLMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K ++ P E+LLVVDAMTGQ+A + +F+ +G+ G ++TKLDGDSRGGAALSVK V+
Sbjct: 207 NIKALVKPQEILLVVDAMTGQDAVNVAESFDQTLGLDGVVMTKLDGDSRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK VG GE++ DLEPF+P+R+A RILGMGDVL+ +EKAQ+ + ++ A+E++ K A
Sbjct: 267 NKPIKFVGMGEKLNDLEPFHPERIASRILGMGDVLTLIEKAQQNIDEKKAKELEAKFRKA 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPE 298
F+F DFL+Q + + MG +S+++GMIPGM K+ Q + EK + +EA+I +MT
Sbjct: 327 EFNFEDFLEQMQQIKNMGPISQLLGMIPGMNAAKLNEIQGQVDEKQMAHIEAIILSMTKA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 348
ER P LL S R+KR+AQ SG+ Q+V++L+ Q QM+ MK G M
Sbjct: 387 ERLNPSLLNMS--RKKRIAQGSGRDLQEVNRLIKQFEQMQGMMKQFSGAM 434
>gi|335040129|ref|ZP_08533265.1| signal recognition particle protein [Caldalkalibacillus thermarum
TA2.A1]
gi|334179954|gb|EGL82583.1| signal recognition particle protein [Caldalkalibacillus thermarum
TA2.A1]
Length = 449
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 180/345 (52%), Positives = 254/345 (73%), Gaps = 3/345 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGE ++L ++ PTVI++ GLQG GKTT + KLA YL+KQ ++ +LVA D+YRPAAI
Sbjct: 87 MGGENAKLAVSQRPPTVIMMVGLQGAGKTTTTGKLAKYLQKQNRNPLLVAADIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ VPV++ G + P IAK+ +E+AK+++ D V++DTAGRL ID+ +M+EL
Sbjct: 147 QLQVLGEQINVPVFSLGDKESPVVIAKKAIEQAKEQHNDYVLIDTAGRLHIDETLMNELN 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E+LLVVDAMTGQ+A + +FN ++ ITG ILTKLDGD+RGGAALSVK V+
Sbjct: 207 QIKEEVRPDEILLVVDAMTGQDAVNVAQSFNEQLNITGVILTKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE+++ LEPF+PDRMA RILGMGDVL+ +EKAQ + QE A+E+++KI
Sbjct: 267 GQPIKFVGMGEKLDALEPFHPDRMASRILGMGDVLTLIEKAQREVDQEKAKELERKIRKM 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEE 299
F F+DFL+Q V MG + ++ M+PG GK+ + ++ EK LK +EA+I +MT EE
Sbjct: 327 EFTFDDFLEQLEQVRNMGPLDELLSMLPGAGKMKGLKDLKVDEKKLKQVEAIIRSMTKEE 386
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
++ PE++ S RRKR+AQ SG + Q V++L+ Q M+ MK +
Sbjct: 387 KQNPEIINAS--RRKRIAQGSGTSVQDVNRLLKQFQDMKKMMKQM 429
>gi|255529983|ref|YP_003090355.1| signal recognition particle protein [Pedobacter heparinus DSM 2366]
gi|255342967|gb|ACU02293.1| signal recognition particle protein [Pedobacter heparinus DSM 2366]
Length = 446
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 184/344 (53%), Positives = 243/344 (70%), Gaps = 4/344 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEV+EL K+ PT+IL+AGL G GKTT + KLAN+LK +GK +LVAGDVYRPAA+D
Sbjct: 86 MGGEVTELDL-KTNPTIILIAGLNGAGKTTFTGKLANFLKNKGKKPLLVAGDVYRPAAVD 144
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ILGEQ+GVPVY P IA +G+ E KK+ +V+I+DTAGRL ID+ MMDE+
Sbjct: 145 QLQILGEQIGVPVYANTASKDPVGIALEGIAEGKKQQNNVIIIDTAGRLAIDEQMMDEIA 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
VK P E+L VVDAMTGQ+A FN + TG +LTKLDGD+RGGAALS+K V
Sbjct: 205 AVKESTKPHEILFVVDAMTGQDAVNTAKAFNDRLDFTGVVLTKLDGDTRGGAALSIKSVV 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK +G GE+ME L+ FYP+RMA RILGMGDV+S VE+AQ+ +++A E+QKKI
Sbjct: 265 NKPIKFIGTGEKMEALDVFYPERMASRILGMGDVVSLVERAQQQFDEKEAAELQKKIRKN 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDF Q + + +MG+M ++GMIPG+GK+ V + + K +EA+I++MT ER
Sbjct: 325 KFDFNDFYNQIQQIKKMGNMKDLMGMIPGVGKMMK-NVDIEDDAFKNVEAIIQSMTKYER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E P+ + +S RR R+A+ SG ++V++L+ Q MR MK
Sbjct: 384 ENPDSIQQS--RRLRIAKGSGNKIEEVTKLIKQFEDMRKVMKQF 425
>gi|399047100|ref|ZP_10739232.1| signal recognition particle protein [Brevibacillus sp. CF112]
gi|398054933|gb|EJL47031.1| signal recognition particle protein [Brevibacillus sp. CF112]
Length = 471
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 180/347 (51%), Positives = 247/347 (71%), Gaps = 3/347 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG V++L A PTVI++AGLQG GKTT + KLA YL+KQ K +LVA D+YRPAAI
Sbjct: 87 MGGSVAQLTMAHRPPTVIMMAGLQGAGKTTTTGKLAKYLQKQNKKPLLVAADIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ VPV+T G +V P IA+Q +E AK ++DVVI+DTAGRL ID+A+MDELK
Sbjct: 147 QLQVLGEQLNVPVFTLGDQVSPVDIARQAIEHAKANHLDVVILDTAGRLHIDEALMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++ V P E+LLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAALSVK V+
Sbjct: 207 QIREVAKPDEILLVVDAMTGQDAVNVAESFNSQLELTGVVLTKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK GE+++ LEPF+PDRMA RILGMGDVLS +EKAQ + +E A +M++++
Sbjct: 267 GKPIKFAAMGEKLDALEPFHPDRMASRILGMGDVLSLIEKAQASVDEEKARDMERQMRQG 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F F+ FL + + +G ++GM+PGM K+ ++ EK + +EA+ ++MT ER
Sbjct: 327 EFTFDMFLDSMQQLRNLGPFEDILGMLPGMNKMK-GKMNVDEKQIARVEAIAKSMTKAER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
P+LL S RRKR+A SG + Q+V++ + Q +M+ MK GV
Sbjct: 386 ANPDLLNAS--RRKRIASGSGTSIQEVNRFIKQFEEMKKMMKQFTGV 430
>gi|403383367|ref|ZP_10925424.1| signal recognition particle-like (SRP) component [Kurthia sp. JC30]
Length = 455
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 189/368 (51%), Positives = 260/368 (70%), Gaps = 11/368 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S + F+ PTVI++ GLQG GKTT + KLAN L KK K +LVA DVYRPAA+
Sbjct: 87 MGGEQSPVKFSNRPPTVIMMVGLQGAGKTTTTGKLANVLRKKYNKKPLLVAADVYRPAAV 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV+ GTEV P IA+ +E AK+++ DVVI+DTAGRL ID+A+M EL
Sbjct: 147 KQLQTLGKQLSIPVFEKGTEVSPVDIARDAIEFAKEEHHDVVIIDTAGRLHIDEALMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
KD++ + P EV LVVDAMTGQ+A + +FN +GITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KDIRALKEPDEVFLVVDAMTGQDAVNVAESFNDAVGITGVVLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG GE+M+ LEPF+P+RMA RILGMGDVLS +EKAQE + E A+E+++K +
Sbjct: 267 TEKPIKFVGMGEKMDALEPFHPERMAQRILGMGDVLSLIEKAQETVDAEKAKELEEKFKT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
+F F+DFL Q V +MG + +I MIPGM K+ ++ +K + +EA+I++MT
Sbjct: 327 QSFTFDDFLDQMSQVKKMGPLEDIIKMIPGMNKVKGLDKMNFDDKQINHIEAIIQSMTIA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME--GG----- 351
ER PE++ S RRKR+A SG++ Q+V++L+ Q +M+ MK + G+M GG
Sbjct: 387 ERTNPEIITSS--RRKRIALGSGRSVQEVNRLIKQFDEMKKMMKQMSGMMNPAGGKKKKF 444
Query: 352 SLPALSNL 359
LP + +L
Sbjct: 445 KLPGMDSL 452
>gi|433546093|ref|ZP_20502431.1| hypothetical protein D478_20514 [Brevibacillus agri BAB-2500]
gi|432182709|gb|ELK40272.1| hypothetical protein D478_20514 [Brevibacillus agri BAB-2500]
Length = 471
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 180/347 (51%), Positives = 247/347 (71%), Gaps = 3/347 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG V++L A PTVI++AGLQG GKTT + KLA YL+KQ K +LVA D+YRPAAI
Sbjct: 87 MGGSVAQLTMAHRPPTVIMMAGLQGAGKTTTTGKLAKYLQKQNKKPLLVAADIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ VPV+T G +V P IA+Q +E AK ++DVVI+DTAGRL ID+A+MDELK
Sbjct: 147 QLQVLGEQLNVPVFTLGDQVSPVDIARQAIEHAKANHLDVVILDTAGRLHIDEALMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++ V P E+LLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAALSVK V+
Sbjct: 207 QIREVAKPDEILLVVDAMTGQDAVNVAESFNSQLELTGVVLTKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK GE+++ LEPF+PDRMA RILGMGDVLS +EKAQ + +E A +M++++
Sbjct: 267 GKPIKFAAMGEKLDALEPFHPDRMASRILGMGDVLSLIEKAQASVDEEKARDMERQMRQG 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F F+ FL + + +G ++GM+PGM K+ ++ EK + +EA+ ++MT ER
Sbjct: 327 EFTFDMFLDSMQQLRNLGPFEDILGMLPGMNKMK-GKMNVDEKQIARVEAIAKSMTKAER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
P+LL S RRKR+A SG + Q+V++ + Q +M+ MK GV
Sbjct: 386 ANPDLLNAS--RRKRIASGSGTSIQEVNRFIKQFEEMKKMMKQFSGV 430
>gi|226313205|ref|YP_002773099.1| signal recognition particle protein fifty-four homolog
[Brevibacillus brevis NBRC 100599]
gi|226096153|dbj|BAH44595.1| signal recognition particle protein fifty-four homolog
[Brevibacillus brevis NBRC 100599]
Length = 470
Score = 361 bits (927), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 177/346 (51%), Positives = 249/346 (71%), Gaps = 3/346 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG V++L A PTVI++AGLQG GKTT + KLA YL+KQ + +LVAGD+YRPAAI
Sbjct: 87 MGGNVAQLTMAHRPPTVIMMAGLQGAGKTTTTGKLAKYLQKQNRKPLLVAGDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ VPV+T G +V P +IA+Q +E AK ++DVV++DTAGRL ID+A+MDELK
Sbjct: 147 QLQVLGEQLNVPVFTLGDQVSPVEIARQAIEHAKTNHLDVVLIDTAGRLHIDEALMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++ V P E+LLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAALSVK V+
Sbjct: 207 QIREVTKPDEILLVVDAMTGQDAVNVAESFNSQLELTGVVLTKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK GE+++ LEPF+PDRMA RILGMGDVLS +EKAQ + ++ A +M++++
Sbjct: 267 GKPIKFAAMGEKLDALEPFHPDRMASRILGMGDVLSLIEKAQASVDEDKARDMERQMRQG 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F F+ FL + + +G ++GM+PGM K+ ++ EK + +EA+ ++MT +ER
Sbjct: 327 EFTFDMFLDSMQQLRNLGPFEDILGMLPGMNKMK-GKMNVDEKQIARVEAIAKSMTKQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
P+LL S RRKR+A SG + Q+V++ + Q +M+ MK G
Sbjct: 386 ANPDLLNAS--RRKRIASGSGTSIQEVNRFLKQFEEMKKMMKQFSG 429
>gi|374296102|ref|YP_005046293.1| signal recognition particle protein [Clostridium clariflavum DSM
19732]
gi|359825596|gb|AEV68369.1| signal recognition particle protein [Clostridium clariflavum DSM
19732]
Length = 450
Score = 361 bits (926), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 182/344 (52%), Positives = 247/344 (71%), Gaps = 4/344 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S+LVFA PTV ++ GLQG GKTT S KLAN L+KQGK +LVA DVYRPAAI
Sbjct: 87 MGPGQSKLVFAPKPPTVYMMVGLQGSGKTTTSGKLANLLRKQGKKPLLVACDVYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G Q+GV V++ G + P IAK +E AK K D+VI+DTAGRL ID+A+MDELK
Sbjct: 147 QLQVVGGQLGVDVFSMGDKTNPIDIAKAAIEHAKSKQYDLVIIDTAGRLHIDEALMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + PTE+LLVVD+MTGQ+A + TFN ++GI G ILTKLDGD+RGGAALSVK V+
Sbjct: 207 NIKESVRPTEILLVVDSMTGQDAVNVSETFNEKLGIDGVILTKLDGDTRGGAALSVKTVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE++ DLEPF+PDRMA RILGMGDVLS +EKAQE ++ A E+++K+ +
Sbjct: 267 GKPIKFIGMGEKLNDLEPFFPDRMASRILGMGDVLSLIEKAQEAFDEKKALELERKMRTQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPE 298
F DFL+Q + + +MG +++++GMIPG+ + ++EK L EA+I++MT +
Sbjct: 327 QFTLEDFLEQMQQIKKMGPLNKILGMIPGINAEALNAINTADSEKELARFEAIIKSMTKQ 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
ER P ++ S RRKR+A SG Q V++++ +M+ MK
Sbjct: 387 ERNDPSIINGS--RRKRIAAGSGTKVQDVNKVLKSFEEMKKMMK 428
>gi|387219191|gb|AFJ69304.1| signal recognition particle subunit SRP54, partial [Nannochloropsis
gaditana CCMP526]
Length = 604
Score = 360 bits (925), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 188/354 (53%), Positives = 249/354 (70%), Gaps = 10/354 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSC------MLVAGDVY 54
MG E +EL A PTVILLAGLQG GKTT +AKLA Y + + + ++VA DVY
Sbjct: 172 MGAEQAELAQASKPPTVILLAGLQGAGKTTAAAKLALYCQSRAEKAEAFEKILMVAADVY 231
Query: 55 RPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKA 114
RPAAIDQL LGE++ V V++ GT+ P IA++ LE+AK + VIVDTAGR ID+
Sbjct: 232 RPAAIDQLRTLGERIDVEVFSMGTDEDPIVIARKALEKAKAQGFTTVIVDTAGRQVIDEK 291
Query: 115 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 174
+M E+K VK + P EVLLVVDAMTGQEAA + FN EIG+TGAILTKLDGD+RGGAAL
Sbjct: 292 LMKEIKGVKTAVKPDEVLLVVDAMTGQEAATVTARFNDEIGLTGAILTKLDGDTRGGAAL 351
Query: 175 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 234
SV+ VSGKPIK +G GE +E LEPFYPDRMA RILGMGDV+S VEKAQ+ + Q+DA +
Sbjct: 352 SVRGVSGKPIKFIGVGETLEKLEPFYPDRMASRILGMGDVVSLVEKAQDEINQDDAMAIF 411
Query: 235 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 293
KK+M+ FDF+DF+ QTR +++MGS+S ++ MIPGM + P + E EK L + MI
Sbjct: 412 KKMMTGTFDFDDFMTQTRMISKMGSLSGMMKMIPGMAGVLPGDAMYEGEKKLFAYQEMIN 471
Query: 294 AMTPEEREKPELLAESP---VRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
M PEER+ P++L ++P +R KR+ ++SG++ ++ + +R+ M +
Sbjct: 472 VMEPEERKDPKMLLDNPGADLRWKRIVEESGRSMEEAKNFQREFSNLRLMMTRM 525
>gi|149280108|ref|ZP_01886232.1| signal recognition particle protein [Pedobacter sp. BAL39]
gi|149229122|gb|EDM34517.1| signal recognition particle protein [Pedobacter sp. BAL39]
Length = 446
Score = 360 bits (924), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 183/344 (53%), Positives = 242/344 (70%), Gaps = 4/344 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEV+E+ K+ PT+IL+AGL G GKTT + KLANYLK +GK +LVAGDVYRPAA+D
Sbjct: 86 MGGEVTEIDL-KNNPTIILIAGLNGAGKTTFTGKLANYLKSKGKKPLLVAGDVYRPAAVD 144
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ILGEQ+GVPVY P IA +G+ E KK++ +V+I+DTAGRL ID+ MMDE+
Sbjct: 145 QLQILGEQIGVPVYANIESKDPVGIALEGIAEGKKQHNNVIIIDTAGRLAIDEQMMDEIA 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
VK P E+L VVDAMTGQ+A FN + TG +LTKLDGD+RGGAALS+K V
Sbjct: 205 AVKENTKPHEILFVVDAMTGQDAVNTAKAFNDRLDFTGVVLTKLDGDTRGGAALSIKSVV 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK +G GE+ME L+ FYP+RMA RILGMGDV+S VE+AQ+ +++A E+QKKI
Sbjct: 265 NKPIKFIGTGEKMEALDVFYPERMASRILGMGDVVSLVERAQQQFDEKEAAELQKKIRKN 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDF Q + + +MG+M ++GMIPG+ K+ V + + K +EA+I++MT ER
Sbjct: 325 KFDFNDFYSQIQQIKKMGNMKDLMGMIPGVSKMMK-NVEIEDDAFKNVEAIIQSMTKYER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E P+ + +S RR R+A+ SG + V++L+ Q MR MK
Sbjct: 384 ENPDSIQQS--RRARIAKGSGNKVEDVTKLIKQFEDMRKVMKQF 425
>gi|393201748|ref|YP_006463590.1| signal recognition particle GTPase [Solibacillus silvestris
StLB046]
gi|406664625|ref|ZP_11072400.1| Signal recognition particle GTPase [Bacillus isronensis B3W22]
gi|327441079|dbj|BAK17444.1| signal recognition particle GTPase [Solibacillus silvestris
StLB046]
gi|405387473|gb|EKB46897.1| Signal recognition particle GTPase [Bacillus isronensis B3W22]
Length = 452
Score = 360 bits (923), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 179/349 (51%), Positives = 257/349 (73%), Gaps = 4/349 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S + F+ PTVI++ GLQG GKTT + KLAN L KK K +LVA D+YRPAA+
Sbjct: 87 MGGEQSPIKFSNRPPTVIMMVGLQGAGKTTTTGKLANVLRKKYNKKPLLVAADIYRPAAV 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL LG+Q+ +PV++ GT+V P +IA+Q +E AK++++DVV++DTAGRL ID+ +M EL
Sbjct: 147 EQLQTLGKQLSLPVFSLGTDVSPVEIARQAIEHAKEEHLDVVLIDTAGRLHIDEELMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
KD++ + P EV LVVDAMTGQ+A + +FN +GITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KDIRGLKEPDEVFLVVDAMTGQDAVNVAQSFNETVGITGVVLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG GE+M+ LEPF+P+RMA RILGMGDVLS +EKAQ + E A+E+++K M+
Sbjct: 267 TEKPIKFVGMGEKMDALEPFHPERMASRILGMGDVLSLIEKAQANVDMEKAKELEEKFMT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
+F F+DF++Q + V +MG + ++ MIPG K+ V+ EK + +EA+I +MTP
Sbjct: 327 QSFTFDDFIEQLQAVKKMGPLDELLKMIPGANKMKGLDNVKVDEKQMGRIEAIIYSMTPN 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
E+ PE+++ S R+KR+A SG T Q+V++L+ Q +M+ MK + G+
Sbjct: 387 EKTNPEIISAS--RKKRIATGSGTTIQEVNRLLKQFEEMKKMMKQMTGM 433
>gi|37522208|ref|NP_925585.1| signal recognition particle protein SRP54 [Gloeobacter violaceus
PCC 7421]
gi|35213208|dbj|BAC90580.1| signal recognition particle protein SRP54 [Gloeobacter violaceus
PCC 7421]
Length = 497
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 183/321 (57%), Positives = 237/321 (73%), Gaps = 2/321 (0%)
Query: 11 AKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG 70
AK RP V+L+AGLQG GKTT SAKLA YL+K G+ +L A DVYRPAAIDQL LG Q+
Sbjct: 98 AKGRPAVVLMAGLQGTGKTTASAKLALYLQKNGQKPLLAAADVYRPAAIDQLQTLGGQIQ 157
Query: 71 VPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTE 130
VPV+T G E P IA+ LE A DV+IVDTAGRL ID AMM EL+ +K ++P E
Sbjct: 158 VPVFTLGKEADPVDIARASLERAIADRHDVLIVDTAGRLSIDDAMMAELERIKAAIDPEE 217
Query: 131 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 190
+LLVVDAMTGQEAA L F+ +GITGAILTKLDGD+RGGAALSV+++SG+PIK VG G
Sbjct: 218 ILLVVDAMTGQEAANLTRAFHDRLGITGAILTKLDGDTRGGAALSVRKISGQPIKFVGVG 277
Query: 191 ERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQ 250
E++E L+PFYP+RMA RILGMGDVL+ VEKAQE + DA +M++++++ FDF F+KQ
Sbjct: 278 EKVEALQPFYPERMASRILGMGDVLTLVEKAQEEIDFADAAKMEQQLLTGQFDFESFIKQ 337
Query: 251 TRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESP 310
R + MG + V+ MIPGM KI+ Q+R+ E LK EAMI +MT +ER P+L+ S
Sbjct: 338 MRMIKNMGPLGGVLKMIPGMNKISDDQIRQGEVQLKKAEAMIGSMTTQERRNPDLINLS- 396
Query: 311 VRRKRVAQDSGKTEQQVSQLV 331
R++R+++ SG + + V +L+
Sbjct: 397 -RKRRISKGSGVSLEDVGKLL 416
>gi|150390508|ref|YP_001320557.1| signal recognition particle protein [Alkaliphilus metalliredigens
QYMF]
gi|149950370|gb|ABR48898.1| signal recognition particle protein [Alkaliphilus metalliredigens
QYMF]
Length = 447
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 182/344 (52%), Positives = 242/344 (70%), Gaps = 2/344 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S++ F+ PTVI+L GLQG GKTT S KLA YLKKQGK +LVAGD+YRPAAI
Sbjct: 87 MGTTQSKITFSSKPPTVIMLVGLQGAGKTTTSGKLAGYLKKQGKRPLLVAGDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G QV VPV+T G ++ P IAK G+E K DVV++DTAGRL ID +MDELK
Sbjct: 147 QLEVVGSQVDVPVFTLGDQISPVDIAKAGVEHGIKHGNDVVLIDTAGRLHIDDTLMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K + P E+LLVVD+MTGQ+A + F+ ++G+ G ILTKLDGD+RGGAALSV+ V+
Sbjct: 207 DIKTTVKPQEILLVVDSMTGQDAVNVAEHFDTKLGVDGIILTKLDGDTRGGAALSVRAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK VG GE++ DLEPF+PDRMA RILGMGDVLS +EKAQ ++ A+E++ KI +
Sbjct: 267 RKPIKFVGLGEKLNDLEPFHPDRMASRILGMGDVLSLIEKAQVSFDEKKAKELENKIKTQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F F DFL+Q + V MG +S+++ MIPG G + EK L ++A+I++MT ER
Sbjct: 327 QFTFEDFLEQLQQVQSMGPISQLLEMIPGAGGKQMKNLEVDEKELVHIQAIIQSMTTGER 386
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+ P ++ S RRKR+A+ SG + QV++L+ Q Q + MK
Sbjct: 387 KTPTIINGS--RRKRIAKGSGTSVAQVNRLIKQFDQTKKMMKQF 428
>gi|354584950|ref|ZP_09003841.1| signal recognition particle protein [Paenibacillus lactis 154]
gi|353191067|gb|EHB56576.1| signal recognition particle protein [Paenibacillus lactis 154]
Length = 459
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 259/363 (71%), Gaps = 5/363 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S+L + PTVI++AGLQG GKTT S KLA L+KQ +LVAGD+YRPAAI
Sbjct: 87 MGGTQSKLAKSSKPPTVIMMAGLQGAGKTTTSGKLAKLLQKQNSRPLLVAGDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ VPV++ G + P +IAKQGL+ AK D VI+DTAGRL +D+ +M+ELK
Sbjct: 147 QLQVLGEQIKVPVFSLGDKTSPVEIAKQGLQHAKDNGHDYVIIDTAGRLHVDEELMEELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+ +NP EVLLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAALSVK V+
Sbjct: 207 QIHSAVNPDEVLLVVDAMTGQDAVNVAESFNQQLTLTGVVLTKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK GE+++ LEPF+P+RMA RILGMGD+LS +EKAQ + E A+EM++K+ +A
Sbjct: 267 GCPIKFAALGEKIDALEPFHPERMASRILGMGDMLSLIEKAQSNIDAEKAKEMERKMRNA 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEE 299
F F DFL+Q V ++G + +++ MIPGMGK+ A+ ++ EK + +EA++ +MT EE
Sbjct: 327 EFTFEDFLEQMEQVKKLGPLDQLMDMIPGMGKMKQAKDLKVDEKQMGRIEAIVHSMTTEE 386
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM--EGGSLPALS 357
+++P+++ + RRKR+A SG + +V++L+ Q +MR MK +M +GG AL
Sbjct: 387 KQQPDIINHN--RRKRIAAGSGTSLAEVNRLIKQFDEMRRVMKQFSDMMGPKGGKNKALK 444
Query: 358 NLE 360
L+
Sbjct: 445 QLK 447
>gi|328957317|ref|YP_004374703.1| signal recognition particle-like (SRP) GTPase [Carnobacterium sp.
17-4]
gi|328673641|gb|AEB29687.1| signal recognition particle-like (SRP) GTPase [Carnobacterium sp.
17-4]
Length = 475
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 178/361 (49%), Positives = 259/361 (71%), Gaps = 8/361 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAI 59
MGGE + + + PTV+++ GLQG GKTT + KLA+YL+K Q K +L+A D+YRPAAI
Sbjct: 87 MGGEQATIQTSPKAPTVVMMVGLQGAGKTTTAGKLASYLRKNQNKRPLLIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL +G+Q+ VPV++ G +V P +IA+QG+E+AK +++D V++DTAGRLQID+ +M EL
Sbjct: 147 QQLETIGKQLDVPVFSMGDQVSPVEIARQGIEKAKAEHLDFVLIDTAGRLQIDETLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
D+K PTE+ LVVDAMTGQEAA + ++FN ++ ITG ILTKLDGD+RGGAALS++ V
Sbjct: 207 SDIKETSQPTEIFLVVDAMTGQEAANVASSFNEQLDITGVILTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE+++ LEPFYP+RMA RILGMGD+L+ +EKAQE ++ +EEM K+
Sbjct: 267 TGKPIKFTGSGEKLDALEPFYPERMANRILGMGDMLTLIEKAQEDFDEKKSEEMMTKLRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE-KSLKIMEAMIEAMTPE 298
+FDFNDF++Q V+ MG M ++ MIPGM + + + K M+A++ +MTP+
Sbjct: 327 NSFDFNDFIEQMDQVSNMGPMEDILKMIPGMSNVPGLDKLQIDPKDTARMKAIVLSMTPQ 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSN 358
ERE P+LL++S RR+R+A+ S + +V++L+ Q + K +M M G++ + N
Sbjct: 387 ERENPDLLSQS--RRRRIARGSARPIAEVNRLIKQFNE----SKKMMSQMSKGNMNGMEN 440
Query: 359 L 359
L
Sbjct: 441 L 441
>gi|373497899|ref|ZP_09588415.1| signal recognition particle protein [Fusobacterium sp. 12_1B]
gi|404367833|ref|ZP_10973195.1| signal recognition particle protein [Fusobacterium ulcerans ATCC
49185]
gi|371962421|gb|EHO80022.1| signal recognition particle protein [Fusobacterium sp. 12_1B]
gi|404288644|gb|EFS25760.2| signal recognition particle protein [Fusobacterium ulcerans ATCC
49185]
Length = 446
Score = 358 bits (918), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 181/354 (51%), Positives = 251/354 (70%), Gaps = 8/354 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG S L PTV++L+GLQG GKTT +AKLANYLKKQG+S ++V DVYRPAAI
Sbjct: 86 LGGTNSRLTKGVRNPTVLMLSGLQGAGKTTFAAKLANYLKKQGESVLMVGADVYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQV VPVY I + GL +AK+ N +I+DTAGRL ID+ +MDEL+
Sbjct: 146 QLQVLGEQVDVPVYAEEDNKDAVAICEHGLAKAKELNSTYMIIDTAGRLHIDEKLMDELR 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K+ + P E+LLVVDAM GQ+A L +FN + I G +LTKLDGD+RGGAALS+K V
Sbjct: 206 NIKKAVRPQEILLVVDAMIGQDAVNLAESFNNVLSIDGIVLTKLDGDTRGGAALSIKSVV 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GER++D+E F+P+R+ RILGMGDV+S VEKAQ + +EDA+ +++KI +
Sbjct: 266 GKPIKFVGVGERIDDIELFHPERLVSRILGMGDVVSLVEKAQSAIDEEDAKSLEEKIRTQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FD NDFLKQ + + ++GS+ ++ MIPGMG++ + AEK +K +EA+I++MT EER
Sbjct: 326 KFDLNDFLKQLQNIKKLGSLGSILKMIPGMGQV--GDLAPAEKEMKKVEAIIQSMTKEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 354
+KP++L + R+KR+A SG +++L+ Q Q MK +M + GG +P
Sbjct: 384 KKPDILKAN--RKKRIALGSGTEVADINRLLKQFEQ----MKGMMKMFSGGKMP 431
>gi|436835876|ref|YP_007321092.1| signal recognition particle protein [Fibrella aestuarina BUZ 2]
gi|384067289|emb|CCH00499.1| signal recognition particle protein [Fibrella aestuarina BUZ 2]
Length = 439
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 180/356 (50%), Positives = 248/356 (69%), Gaps = 4/356 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGE ++ + K P V+L+AGLQG GKTT S KLA+Y+KKQG++ +LVA D+YRPAAID
Sbjct: 86 MGGE-AQPINLKGDPAVVLIAGLQGSGKTTFSGKLASYIKKQGRNVLLVACDIYRPAAID 144
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQVGV VY+ QIA+ + AKK N +VIVDTAGRL +D+AMM E++
Sbjct: 145 QLKVLGEQVGVEVYSEPDNKNAVQIAQNAISHAKKTNKKIVIVDTAGRLAVDEAMMQEIE 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
VK+ +NP+E L VVD+MTGQ+A TFN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 QVKKAINPSETLFVVDSMTGQDAVNTAKTFNDRLDFDGVVLTKLDGDARGGAALSIRAVV 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK + GE+ME L+ FYPDRMA RILGMGDV+S VE+AQ+ ++A + K+
Sbjct: 265 SKPIKFMSTGEKMEALDVFYPDRMASRILGMGDVISLVERAQQAFDDDEARRINAKMRKN 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFL Q + + +MG++ ++GMIPGMGK+ + S +EA+I +MTP+ER
Sbjct: 325 QFDFNDFLSQLQQIKKMGNIKDLLGMIPGMGKMVK-DLDLDNASFAPIEAIISSMTPKER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 356
E+P+++ +S R++R+A SG +EQQV+ L+ Q +MR MK + + G L +
Sbjct: 384 ERPDMIDKS--RKRRIALGSGTSEQQVTNLLKQFDEMRKMMKKMNQMQASGKLAKM 437
>gi|398814569|ref|ZP_10573250.1| signal recognition particle protein [Brevibacillus sp. BC25]
gi|398036838|gb|EJL30047.1| signal recognition particle protein [Brevibacillus sp. BC25]
Length = 470
Score = 357 bits (917), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 174/346 (50%), Positives = 249/346 (71%), Gaps = 3/346 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG V++L A PTVI++AGLQG GKTT + KLA YL+KQ + +LVAGD+YRPAAI
Sbjct: 87 MGGNVAQLTMAHRPPTVIMMAGLQGAGKTTTTGKLAKYLQKQNRKPLLVAGDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+Q+ VPV+T G +V P +IA+Q +E AK ++DVV++DTAGRL ID+A+MDELK
Sbjct: 147 QLQVLGDQLNVPVFTLGDQVSPVEIARQAIEHAKTNHLDVVLIDTAGRLHIDEALMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++ V P E+LLVVD+MTGQ+A + +FN ++ +TG +LTKLDGD+RGGAALSVK V+
Sbjct: 207 QIREVTKPDEILLVVDSMTGQDAVNVAESFNSQLELTGVVLTKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK GE+++ LEPF+PDRMA RILGMGDVLS +EKAQ + ++ A +M++++
Sbjct: 267 GKPIKFAAMGEKLDALEPFHPDRMASRILGMGDVLSLIEKAQASVDEDKARDMERQMRQG 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F F+ FL + + +G ++GM+PGM K+ ++ EK + +EA+ ++MT +ER
Sbjct: 327 EFTFDMFLDSMQQLRNLGPFEDILGMLPGMNKMK-GKMNVDEKQIARVEAIAKSMTKQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
P+LL + RRKR+A SG + Q+V++ + Q +M+ MK G
Sbjct: 386 ANPDLLNAN--RRKRIASGSGTSIQEVNRFLKQFEEMKKMMKQFSG 429
>gi|373954810|ref|ZP_09614770.1| signal recognition particle protein [Mucilaginibacter paludis DSM
18603]
gi|373891410|gb|EHQ27307.1| signal recognition particle protein [Mucilaginibacter paludis DSM
18603]
Length = 442
Score = 357 bits (917), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 185/345 (53%), Positives = 243/345 (70%), Gaps = 5/345 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAI 59
MGG +EL F + PT+IL+AGL G GKTT + KLAN+LK Q GK +LVAGDVYRPAAI
Sbjct: 86 MGGSTAELNFPAT-PTIILIAGLNGAGKTTFTGKLANFLKTQKGKKPLLVAGDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +LGEQ+GVPVY P IA++G+ AK+ +VVIVDTAGRL ID+AMM E+
Sbjct: 145 EQLKVLGEQIGVPVYANLESKDPIAIAREGVALAKQNGNNVVIVDTAGRLSIDEAMMVEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ VK LNP E+L VVD+MTGQ+A FN + TG +LTKLDGD+RGGAALS+K V
Sbjct: 205 EQVKAALNPHEILFVVDSMTGQDAVNTAKVFNDRLDFTGVVLTKLDGDTRGGAALSIKSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+ME L+ F+PDRMA RILGMGDV+S VE+AQ+ ++ A E+QKKI
Sbjct: 265 VNKPIKFIGTGEKMEALDVFHPDRMASRILGMGDVVSLVERAQQQFDEKQAAELQKKIRK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDF Q + + +MG+M ++GMIPG+GK V + + K +EA+I++MTP E
Sbjct: 325 NKFDFNDFYGQIQQIKKMGNMKDLMGMIPGVGKAMK-DVEIDDNAFKAIEAIIQSMTPFE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+E P+ + +S RR R+A SG Q+V++L+ Q MR MK +
Sbjct: 384 KENPDSINQS--RRNRIANGSGTNLQEVNRLIKQFDDMRKVMKQM 426
>gi|312134783|ref|YP_004002121.1| signal recognition particle protein [Caldicellulosiruptor
owensensis OL]
gi|311774834|gb|ADQ04321.1| signal recognition particle protein [Caldicellulosiruptor
owensensis OL]
Length = 443
Score = 357 bits (916), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 179/344 (52%), Positives = 242/344 (70%), Gaps = 2/344 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG ++L F+ S ++ ++ GLQG GKTT + KLA LKKQGK+ +LVA D+YRPAAI
Sbjct: 86 LGGSDAKLTFSPSGFSIYMMVGLQGSGKTTTAGKLAGLLKKQGKNPLLVACDIYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++ ++VGV Y T +IAK G+E AK DVVI+DTAGRL I++ +MDELK
Sbjct: 146 QLEVVAQKVGVKCYADYTSQDAVKIAKDGIEFAKSNRSDVVIIDTAGRLHINQELMDELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + PTE+LLVVDAMTGQ+A + FN ++GI G I+TKLDGD+RGGAALSVK ++
Sbjct: 206 NIKNAVKPTEILLVVDAMTGQDAVNVAEAFNAQLGIDGIIMTKLDGDTRGGAALSVKAIT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK G GE+MEDLEPFYPDRMA RILGMGD+L+ +EKAQE + Q+ AEE++KK+ S
Sbjct: 266 GKPIKFAGVGEKMEDLEPFYPDRMASRILGMGDILTLIEKAQEAIDQKKAEELEKKLRSM 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F DFL Q + + +MG +S++I MIPG+ EK LK +EA+I +MT EER
Sbjct: 326 QFTLEDFLDQLKQIKKMGPLSQIISMIPGIKLKGDVDFDAGEKELKKIEAIINSMTREER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+ P ++ S R++R+A SG T Q V++L+ Q M+ MK
Sbjct: 386 QDPSIINSS--RKRRIAMGSGTTVQDVNRLLKQFEDMKRMMKQF 427
>gi|392989044|ref|YP_006487637.1| signal recognition particle protein [Enterococcus hirae ATCC 9790]
gi|392336464|gb|AFM70746.1| signal recognition particle protein [Enterococcus hirae ATCC 9790]
Length = 472
Score = 357 bits (916), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 178/346 (51%), Positives = 252/346 (72%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAI 59
+G E EL + PTVI++AGLQG GKTT + KLANYLKK + +L+AGDVYRPAAI
Sbjct: 87 LGAETVELNKSPKIPTVIMMAGLQGAGKTTFTGKLANYLKKNENARPLLIAGDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +LG+Q+ VPV+ GT+V P +I +QG+E AK+K D V++DTAGRL ID+ +MDEL
Sbjct: 147 DQLKVLGQQLDVPVFDMGTDVSPVEIVRQGMELAKEKKNDYVLIDTAGRLHIDETLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K + P E+LLVVDAMTGQ+A + +FN ++GITG ++TKLDGD+RGGAALS++ V
Sbjct: 207 KQIKELTQPNEILLVVDAMTGQDAVNVADSFNQQLGITGVVITKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PIK +G GE++ DLE F+PDRMA RILGMGD+L+ +EKAQ+ ++ AEE+ KK+
Sbjct: 267 TGAPIKFIGSGEKLTDLEVFHPDRMASRILGMGDMLTLIEKAQQDYDEKKAEELAKKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+FDFNDF++Q V MG + +I MIPGM ++ + V+ K ++ +AM+ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVMGMGPLEDLIKMIPGMNQVPGIENVKVDPKDVERKKAMVYSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ERE P+LL +P RR+R+A SG + +V++++ Q + R M+ +
Sbjct: 387 ERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESRKMMQQM 430
>gi|110639137|ref|YP_679346.1| signal recognition particle subunit FFH/SRP54 [Cytophaga
hutchinsonii ATCC 33406]
gi|110281818|gb|ABG60004.1| signal recognition particle subunit FFH/SRP54 (srp54) [Cytophaga
hutchinsonii ATCC 33406]
Length = 443
Score = 357 bits (916), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 186/364 (51%), Positives = 256/364 (70%), Gaps = 7/364 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGE E+ K P+VIL+AGLQG GKTT S KLA Y+KKQ ++ +LVA DVYRPAAID
Sbjct: 86 MGGEKQEISL-KGDPSVILIAGLQGSGKTTFSGKLAAYIKKQNRNVLLVACDVYRPAAID 144
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQVGV VYT KP +I+K +E AKK N VVI+DTAGRL ID+ MM+E+
Sbjct: 145 QLKVLGEQVGVEVYTEPDNKKPVEISKNAIEYAKKNNKKVVIIDTAGRLAIDEQMMNEIA 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+VK+ + P+E L VVD+MTGQ+A FN I G +LTKLDGD+RGGAA+S++ V
Sbjct: 205 EVKKAIQPSETLFVVDSMTGQDAVNTAKAFNDRINFDGVVLTKLDGDTRGGAAISIRAVV 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK + GE+M+ L+ FYP+RMA RILGMGDV+S VE+AQ+V +E+ +++ +K+
Sbjct: 265 EKPIKFISTGEKMDALDVFYPERMASRILGMGDVVSLVERAQQVFDEEETKKLNQKLRKN 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F+F DFL Q + + +MGS+ ++GMIPGMGK+ + + + K +EA+I +MT EER
Sbjct: 325 QFNFEDFLNQIQQIKKMGSIKDLVGMIPGMGKMM-KDLPIDDDAFKPIEAIIFSMTKEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 360
E P+LL+ + RR R+A+ SG + QQV+ L+ Q MR MK+ M M+G +P N++
Sbjct: 384 ENPDLLSGN--RRNRIAKGSGTSIQQVNNLLKQFEDMRKMMKS-MNKMQGKGIPP--NMK 438
Query: 361 DALK 364
+ +K
Sbjct: 439 NLMK 442
>gi|167040350|ref|YP_001663335.1| signal recognition particle protein [Thermoanaerobacter sp. X514]
gi|256750717|ref|ZP_05491602.1| signal recognition particle protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|300914434|ref|ZP_07131750.1| signal recognition particle protein [Thermoanaerobacter sp. X561]
gi|307724330|ref|YP_003904081.1| signal recognition particle protein [Thermoanaerobacter sp. X513]
gi|166854590|gb|ABY92999.1| signal recognition particle protein [Thermoanaerobacter sp. X514]
gi|256750300|gb|EEU63319.1| signal recognition particle protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889369|gb|EFK84515.1| signal recognition particle protein [Thermoanaerobacter sp. X561]
gi|307581391|gb|ADN54790.1| signal recognition particle protein [Thermoanaerobacter sp. X513]
Length = 446
Score = 357 bits (915), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 177/347 (51%), Positives = 244/347 (70%), Gaps = 2/347 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S L P VI++ GLQG GKTT KLAN LKKQGK+ +LVA DV RPAAI
Sbjct: 87 MGSTQSRLNIGNKVPAVIMMVGLQGSGKTTACGKLANLLKKQGKNPLLVACDVVRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G V VPV+T G +V P IAK ++ AK N DV+I+DTAGRL +D+ +M+EL
Sbjct: 147 QLQVVGANVNVPVFTMGDKVNPVDIAKASIDYAKSHNSDVIIIDTAGRLHVDEELMEELV 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K+ + P E+LLVVDAMTGQ+A + ++FN + ITG ILTKLDGD+RGGAALS+K V+
Sbjct: 207 NIKKAVQPDEILLVVDAMTGQDAVNVASSFNARLDITGVILTKLDGDTRGGAALSIKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK +G GE++ DLEPFYPDRMA RILGMGDVL+ +EKAQ + ++ A+E+ +K+++
Sbjct: 267 QKPIKYIGTGEKLTDLEPFYPDRMASRILGMGDVLTLIEKAQAAIDEKKAQELGQKLLTK 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F DFL+Q +++ MG + +++ MIPGM K V +EK LK +EA+I++MT EER
Sbjct: 327 QFTLEDFLEQLQSLKNMGPLDQLLSMIPGMNKNMLKNVDFSEKDLKRIEAIIQSMTKEER 386
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
+ P ++ S R+KR+A+ SG T QQV+ L+ Q + + MK +
Sbjct: 387 QNPSIINGS--RKKRIAKGSGTTIQQVNSLLKQFEETKKMMKKFADI 431
>gi|403667650|ref|ZP_10932950.1| signal recognition particle-like (SRP) component [Kurthia sp. JC8E]
Length = 453
Score = 357 bits (915), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 179/349 (51%), Positives = 253/349 (72%), Gaps = 4/349 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S + F+ PTVI++ GLQG GKTT + KLAN L KK K +LVA DVYRPAA+
Sbjct: 87 MGGEQSPVKFSTRPPTVIMMVGLQGAGKTTTTGKLANVLRKKYNKKPLLVAADVYRPAAV 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG Q+ +PV+ GT+V P +IA++ +E AK+++ DVVI+DTAGRL ID+ +M EL
Sbjct: 147 KQLQTLGNQLSIPVFEKGTDVSPVEIAREAIEFAKEEHHDVVIIDTAGRLHIDETLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
KD++ + P EV LVVDAMTGQ+A + +FN +GITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KDIRAIKEPDEVFLVVDAMTGQDAVNVAESFNEAVGITGVVLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG GE+M+ LEPF+P+RMA RILGMGDVL+ +EKAQ + QE A+E+++K +
Sbjct: 267 TEKPIKFVGMGEKMDALEPFHPERMAQRILGMGDVLTLIEKAQATVDQEKAKELEEKFKT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
+F F+DFL Q V +MG + +I MIPGM K+ ++ +K + +EA+I++MT
Sbjct: 327 QSFTFDDFLDQMSQVKKMGPLEDIIKMIPGMNKMKGLDKMNFDDKQINHIEAIIQSMTVA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
ER PE++ S RRKR+++ SG++ Q+V++L+ Q +M+ MK + G+
Sbjct: 387 ERTNPEIINAS--RRKRISKGSGRSVQEVNRLIKQFDEMKKMMKQMTGL 433
>gi|317133004|ref|YP_004092318.1| signal recognition particle protein [Ethanoligenens harbinense
YUAN-3]
gi|315470983|gb|ADU27587.1| signal recognition particle protein [Ethanoligenens harbinense
YUAN-3]
Length = 443
Score = 357 bits (915), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 184/347 (53%), Positives = 249/347 (71%), Gaps = 4/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGE S + +A PTVILL GLQG GKTT +AKLA +KKQGK +L A DVYRPAAI
Sbjct: 87 MGGEQSRIRYASKPPTVILLCGLQGSGKTTHAAKLALSMKKQGKRPLLAACDVYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++GE+ GVPV+ G + P +IAK L AK DV+I+DTAGRL +D+A+MDELK
Sbjct: 147 QLQVVGEKAGVPVFEQG-QGDPVKIAKAALHHAKDHGSDVLILDTAGRLHVDEALMDELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E+LLVVDAMTGQ+A + ++FN +GI G ILTKLDGD+RGGAALSV+ V+
Sbjct: 206 RIKAAVEPDEILLVVDAMTGQDAVNVASSFNEVLGIDGVILTKLDGDTRGGAALSVRAVT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK G GE+++DLEPF+P+RMA RILGMGD+L+ +EKA++ + Q+ A EM KK+
Sbjct: 266 GKPIKFAGTGEKLDDLEPFHPERMASRILGMGDMLTLIEKAEQEVDQKKAAEMAKKLKHN 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEE 299
DFNDFL+ R + +MGS+S V+ M+PG+ GK++ Q+ + E +K EA+I +MT E
Sbjct: 326 AIDFNDFLESIRQMKKMGSLSSVMNMLPGVRGKVSEEQMDKGEIEMKRTEAIITSMTAYE 385
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
RE+PE + +P R++R+A SG + V++L+ Q R MK + G
Sbjct: 386 RERPESI--NPSRKRRIASGSGTKVEDVNRLLRNFEQTRKMMKQMGG 430
>gi|158320496|ref|YP_001513003.1| signal recognition particle protein [Alkaliphilus oremlandii
OhILAs]
gi|158140695|gb|ABW19007.1| signal recognition particle protein [Alkaliphilus oremlandii
OhILAs]
Length = 448
Score = 356 bits (914), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 178/344 (51%), Positives = 241/344 (70%), Gaps = 2/344 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S++ F+ PT+I+L GLQG GKTT + KLA LKKQGK +L+A D+YRPAAI
Sbjct: 87 MGTSQSKINFSSKPPTIIMLVGLQGAGKTTTTGKLAGMLKKQGKRPLLIACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++GE+VGVPV+T G + P I+K G++ DV+++DTAGRL +D+ +MDELK
Sbjct: 147 QLQVVGEKVGVPVFTMGDKQSPVDISKAGIDHGMSHGNDVILIDTAGRLHVDEELMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K + P E+LLVVD+MTGQ+A + FN ++GI G ILTKLDGD+RGGAALSV+ V+
Sbjct: 207 DIKNDVKPHEILLVVDSMTGQDAVNVAEHFNEKLGIDGVILTKLDGDTRGGAALSVRAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK G GE+++DLEPFYPDRMA RILGMGD+LS +EKAQ + A+E++ KI +
Sbjct: 267 NKPIKFTGLGEKLDDLEPFYPDRMASRILGMGDMLSLIEKAQANFDAKKAKELENKIKTQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F F+DFL Q V +MGS+S+++ MIPGMG + EK L ++A+I++MT ER
Sbjct: 327 QFTFDDFLDQLEQVQKMGSLSQILEMIPGMGGKQLKGMDVDEKELVYVKAIIQSMTKNER 386
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P ++ S RRKR+A SG + QQV++L+ Q Q R MK
Sbjct: 387 HDPSIINGS--RRKRIASGSGTSVQQVNKLLKQFEQTRKMMKQF 428
>gi|90961606|ref|YP_535522.1| signal recognition particle protein [Lactobacillus salivarius
UCC118]
gi|90820800|gb|ABD99439.1| Signal recognition particle protein [Lactobacillus salivarius
UCC118]
Length = 482
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 180/347 (51%), Positives = 247/347 (71%), Gaps = 6/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E + L + PT+I++ GLQG GKTT ++KLAN LKK+ + ++A DVYRPAAI
Sbjct: 90 MGEEAAPLNKSAKIPTIIMMVGLQGAGKTTTASKLANKLKKEKNARPFMIAADVYRPAAI 149
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ILG+ + VPV++ G +V P +I +QGLEEAK K D VI+DTAGRLQID+ +M EL
Sbjct: 150 DQLKILGKDIDVPVFSLGVDVDPVEIVRQGLEEAKDKKNDYVIIDTAGRLQIDEKLMQEL 209
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K + P E+LL VDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAALS++ V
Sbjct: 210 SSIKELAQPDEILLTVDAMTGQNAVEVAKGFNDQLDVTGVVLTKLDGDTRGGAALSIRAV 269
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK +G+GE+M DL+ FYPDRMA RILGMGD+L+ +EKAQ+ Q+ AEE+ +K+
Sbjct: 270 TGKPIKFIGQGEKMTDLDVFYPDRMASRILGMGDMLTLIEKAQQEYDQKQAEELAEKMRE 329
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
NFDFNDFL Q V MG M +I MIPGM PA ++ K ++ +A++ +MTP
Sbjct: 330 NNFDFNDFLIQMEQVQNMGPMEDIIKMIPGMAN-NPALKNLKVDPKDIEHTKAIVYSMTP 388
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+ERE P+LL +P RR+R+A SG+ Q+V++++ Q QM+ MK +
Sbjct: 389 QERENPDLL--NPSRRRRIAAGSGRPIQEVNRMIKQFKQMQDMMKKM 433
>gi|385840301|ref|YP_005863625.1| Signal recognition particle protein [Lactobacillus salivarius CECT
5713]
gi|417810407|ref|ZP_12457086.1| signal recognition particle protein [Lactobacillus salivarius
GJ-24]
gi|300214422|gb|ADJ78838.1| Signal recognition particle protein [Lactobacillus salivarius CECT
5713]
gi|335349203|gb|EGM50703.1| signal recognition particle protein [Lactobacillus salivarius
GJ-24]
Length = 479
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 180/347 (51%), Positives = 247/347 (71%), Gaps = 6/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E + L + PT+I++ GLQG GKTT ++KLAN LKK+ + ++A DVYRPAAI
Sbjct: 87 MGEEAAPLNKSAKIPTIIMMVGLQGAGKTTTASKLANKLKKEKNARPFMIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ILG+ + VPV++ G +V P +I +QGLEEAK K D VI+DTAGRLQID+ +M EL
Sbjct: 147 DQLKILGKDIDVPVFSLGVDVDPVEIVRQGLEEAKDKKNDYVIIDTAGRLQIDEKLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K + P E+LL VDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAALS++ V
Sbjct: 207 SSIKELAQPDEILLTVDAMTGQNAVEVAKGFNDQLDVTGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK +G+GE+M DL+ FYPDRMA RILGMGD+L+ +EKAQ+ Q+ AEE+ +K+
Sbjct: 267 TGKPIKFIGQGEKMTDLDVFYPDRMASRILGMGDMLTLIEKAQQEYDQKQAEELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
NFDFNDFL Q V MG M +I MIPGM PA ++ K ++ +A++ +MTP
Sbjct: 327 NNFDFNDFLIQMEQVQNMGPMEDIIKMIPGMAN-NPALKNLKVDPKDIEHTKAIVYSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+ERE P+LL +P RR+R+A SG+ Q+V++++ Q QM+ MK +
Sbjct: 386 QERENPDLL--NPSRRRRIAAGSGRPIQEVNRMIKQFKQMQDMMKKM 430
>gi|69248474|ref|ZP_00604748.1| Signal recognition particle protein [Enterococcus faecium DO]
gi|257878620|ref|ZP_05658273.1| signal recognition particle protein [Enterococcus faecium
1,230,933]
gi|257883120|ref|ZP_05662773.1| signal recognition particle protein [Enterococcus faecium
1,231,502]
gi|257891867|ref|ZP_05671520.1| signal recognition particle protein [Enterococcus faecium
1,231,410]
gi|257894437|ref|ZP_05674090.1| signal recognition particle protein [Enterococcus faecium
1,231,408]
gi|260559333|ref|ZP_05831515.1| signal recognition particle protein [Enterococcus faecium C68]
gi|261208009|ref|ZP_05922687.1| signal recognition particle protein [Enterococcus faecium TC 6]
gi|289566895|ref|ZP_06447302.1| signal recognition particle protein [Enterococcus faecium D344SRF]
gi|293556478|ref|ZP_06675052.1| signal recognition particle protein [Enterococcus faecium E1039]
gi|293563841|ref|ZP_06678274.1| signal recognition particle protein [Enterococcus faecium E1162]
gi|293567270|ref|ZP_06678624.1| signal recognition particle protein [Enterococcus faecium E1071]
gi|294615586|ref|ZP_06695442.1| signal recognition particle protein [Enterococcus faecium E1636]
gi|294619810|ref|ZP_06699200.1| signal recognition particle protein [Enterococcus faecium E1679]
gi|314938080|ref|ZP_07845388.1| signal recognition particle protein [Enterococcus faecium
TX0133a04]
gi|314943602|ref|ZP_07850359.1| signal recognition particle protein [Enterococcus faecium TX0133C]
gi|314949239|ref|ZP_07852588.1| signal recognition particle protein [Enterococcus faecium TX0082]
gi|314952611|ref|ZP_07855603.1| signal recognition particle protein [Enterococcus faecium TX0133A]
gi|314992459|ref|ZP_07857881.1| signal recognition particle protein [Enterococcus faecium TX0133B]
gi|314997379|ref|ZP_07862334.1| signal recognition particle protein [Enterococcus faecium
TX0133a01]
gi|383329196|ref|YP_005355080.1| signal recognition particle protein [Enterococcus faecium Aus0004]
gi|389869023|ref|YP_006376446.1| Sec family Type I general secretory pathway protein signal
recognition particle protein [Enterococcus faecium DO]
gi|406581072|ref|ZP_11056251.1| signal recognition particle protein [Enterococcus sp. GMD4E]
gi|406583326|ref|ZP_11058408.1| signal recognition particle protein [Enterococcus sp. GMD3E]
gi|406585675|ref|ZP_11060654.1| signal recognition particle protein [Enterococcus sp. GMD2E]
gi|406591244|ref|ZP_11065537.1| signal recognition particle protein [Enterococcus sp. GMD1E]
gi|410936498|ref|ZP_11368363.1| Sec family Type I general secretory pathway protein signal
recognition particle protein [Enterococcus sp. GMD5E]
gi|415894168|ref|ZP_11550289.1| signal recognition particle protein [Enterococcus faecium E4453]
gi|416142609|ref|ZP_11599613.1| signal recognition particle protein [Enterococcus faecium E4452]
gi|424780120|ref|ZP_18207001.1| signal recognition particle protein [Enterococcus faecium V689]
gi|424802491|ref|ZP_18228004.1| signal recognition particle protein [Enterococcus faecium S447]
gi|424850064|ref|ZP_18274479.1| signal recognition particle protein [Enterococcus faecium R501]
gi|424857588|ref|ZP_18281718.1| signal recognition particle protein [Enterococcus faecium R499]
gi|424907911|ref|ZP_18331345.1| signal recognition particle protein [Enterococcus faecium R497]
gi|424951324|ref|ZP_18366439.1| signal recognition particle protein [Enterococcus faecium R496]
gi|424953399|ref|ZP_18368365.1| signal recognition particle protein [Enterococcus faecium R494]
gi|424958870|ref|ZP_18373490.1| signal recognition particle protein [Enterococcus faecium R446]
gi|424962238|ref|ZP_18376608.1| signal recognition particle protein [Enterococcus faecium P1986]
gi|424962648|ref|ZP_18376966.1| signal recognition particle protein [Enterococcus faecium P1190]
gi|424968649|ref|ZP_18382259.1| signal recognition particle protein [Enterococcus faecium P1140]
gi|424972691|ref|ZP_18386013.1| signal recognition particle protein [Enterococcus faecium P1139]
gi|424975462|ref|ZP_18388619.1| signal recognition particle protein [Enterococcus faecium P1137]
gi|424978927|ref|ZP_18391807.1| signal recognition particle protein [Enterococcus faecium P1123]
gi|424980489|ref|ZP_18393283.1| signal recognition particle protein [Enterococcus faecium ERV99]
gi|424985230|ref|ZP_18397718.1| signal recognition particle protein [Enterococcus faecium ERV69]
gi|424988719|ref|ZP_18401022.1| signal recognition particle protein [Enterococcus faecium ERV38]
gi|424992574|ref|ZP_18404627.1| signal recognition particle protein [Enterococcus faecium ERV26]
gi|424996450|ref|ZP_18408257.1| signal recognition particle protein [Enterococcus faecium ERV168]
gi|424999108|ref|ZP_18410749.1| signal recognition particle protein [Enterococcus faecium ERV165]
gi|424999881|ref|ZP_18411474.1| signal recognition particle protein [Enterococcus faecium ERV161]
gi|425006151|ref|ZP_18417344.1| signal recognition particle protein [Enterococcus faecium ERV102]
gi|425009463|ref|ZP_18420482.1| signal recognition particle protein [Enterococcus faecium ERV1]
gi|425012624|ref|ZP_18423426.1| signal recognition particle protein [Enterococcus faecium E422]
gi|425015748|ref|ZP_18426339.1| signal recognition particle protein [Enterococcus faecium E417]
gi|425019469|ref|ZP_18429832.1| signal recognition particle protein [Enterococcus faecium C621]
gi|425020205|ref|ZP_18430524.1| signal recognition particle protein [Enterococcus faecium C497]
gi|425023133|ref|ZP_18433270.1| signal recognition particle protein [Enterococcus faecium C1904]
gi|425035379|ref|ZP_18440220.1| signal recognition particle protein [Enterococcus faecium 514]
gi|425040142|ref|ZP_18444628.1| signal recognition particle protein [Enterococcus faecium 513]
gi|425043894|ref|ZP_18448093.1| signal recognition particle protein [Enterococcus faecium 511]
gi|425045035|ref|ZP_18449158.1| signal recognition particle protein [Enterococcus faecium 510]
gi|425050560|ref|ZP_18454293.1| signal recognition particle protein [Enterococcus faecium 509]
gi|425051000|ref|ZP_18454694.1| signal recognition particle protein [Enterococcus faecium 506]
gi|425055763|ref|ZP_18459232.1| signal recognition particle protein [Enterococcus faecium 505]
gi|425058389|ref|ZP_18461771.1| signal recognition particle protein [Enterococcus faecium 504]
gi|425062030|ref|ZP_18465213.1| signal recognition particle protein [Enterococcus faecium 503]
gi|427396388|ref|ZP_18889147.1| signal recognition particle protein [Enterococcus durans
FB129-CNAB-4]
gi|430819711|ref|ZP_19438357.1| signal recognition particle protein [Enterococcus faecium E0045]
gi|430822757|ref|ZP_19441332.1| signal recognition particle protein [Enterococcus faecium E0120]
gi|430825710|ref|ZP_19443912.1| signal recognition particle protein [Enterococcus faecium E0164]
gi|430827813|ref|ZP_19445944.1| signal recognition particle protein [Enterococcus faecium E0269]
gi|430830914|ref|ZP_19448970.1| signal recognition particle protein [Enterococcus faecium E0333]
gi|430832888|ref|ZP_19450904.1| signal recognition particle protein [Enterococcus faecium E0679]
gi|430837718|ref|ZP_19455678.1| signal recognition particle protein [Enterococcus faecium E0680]
gi|430838321|ref|ZP_19456268.1| signal recognition particle protein [Enterococcus faecium E0688]
gi|430843828|ref|ZP_19461727.1| signal recognition particle protein [Enterococcus faecium E1050]
gi|430848123|ref|ZP_19465953.1| signal recognition particle protein [Enterococcus faecium E1133]
gi|430849397|ref|ZP_19467177.1| signal recognition particle protein [Enterococcus faecium E1185]
gi|430857923|ref|ZP_19475554.1| signal recognition particle protein [Enterococcus faecium E1552]
gi|430860428|ref|ZP_19478028.1| signal recognition particle protein [Enterococcus faecium E1573]
gi|430865375|ref|ZP_19481073.1| signal recognition particle protein [Enterococcus faecium E1574]
gi|430876823|ref|ZP_19483925.1| signal recognition particle protein [Enterococcus faecium E1575]
gi|430948278|ref|ZP_19485867.1| signal recognition particle protein [Enterococcus faecium E1576]
gi|431003805|ref|ZP_19488903.1| signal recognition particle protein [Enterococcus faecium E1578]
gi|431147517|ref|ZP_19499227.1| signal recognition particle protein [Enterococcus faecium E1620]
gi|431230043|ref|ZP_19502246.1| signal recognition particle protein [Enterococcus faecium E1622]
gi|431252112|ref|ZP_19504170.1| signal recognition particle protein [Enterococcus faecium E1623]
gi|431373172|ref|ZP_19510081.1| signal recognition particle protein [Enterococcus faecium E1627]
gi|431413391|ref|ZP_19512150.1| signal recognition particle protein [Enterococcus faecium E1630]
gi|431497436|ref|ZP_19514590.1| signal recognition particle protein [Enterococcus faecium E1634]
gi|431542316|ref|ZP_19518344.1| signal recognition particle protein [Enterococcus faecium E1731]
gi|431730890|ref|ZP_19525566.1| signal recognition particle protein [Enterococcus faecium E1904]
gi|431742899|ref|ZP_19531782.1| signal recognition particle protein [Enterococcus faecium E2071]
gi|431746433|ref|ZP_19535259.1| signal recognition particle protein [Enterococcus faecium E2134]
gi|431750302|ref|ZP_19539022.1| signal recognition particle protein [Enterococcus faecium E2297]
gi|431755033|ref|ZP_19543691.1| signal recognition particle protein [Enterococcus faecium E2883]
gi|431759542|ref|ZP_19548154.1| signal recognition particle protein [Enterococcus faecium E3346]
gi|431764354|ref|ZP_19552897.1| signal recognition particle protein [Enterococcus faecium E4215]
gi|431767459|ref|ZP_19555911.1| signal recognition particle protein [Enterococcus faecium E1321]
gi|431780833|ref|ZP_19568998.1| signal recognition particle protein [Enterococcus faecium E4389]
gi|431781698|ref|ZP_19569842.1| signal recognition particle protein [Enterococcus faecium E6012]
gi|431785919|ref|ZP_19573940.1| signal recognition particle protein [Enterococcus faecium E6045]
gi|447912364|ref|YP_007393776.1| Signal recognition particle, subunit Ffh SRP54 [Enterococcus
faecium NRRL B-2354]
gi|68194411|gb|EAN08916.1| Signal recognition particle protein [Enterococcus faecium DO]
gi|257812848|gb|EEV41606.1| signal recognition particle protein [Enterococcus faecium
1,230,933]
gi|257818778|gb|EEV46106.1| signal recognition particle protein [Enterococcus faecium
1,231,502]
gi|257828227|gb|EEV54853.1| signal recognition particle protein [Enterococcus faecium
1,231,410]
gi|257830816|gb|EEV57423.1| signal recognition particle protein [Enterococcus faecium
1,231,408]
gi|260074693|gb|EEW63013.1| signal recognition particle protein [Enterococcus faecium C68]
gi|260077767|gb|EEW65480.1| signal recognition particle protein [Enterococcus faecium TC 6]
gi|289161301|gb|EFD09194.1| signal recognition particle protein [Enterococcus faecium D344SRF]
gi|291590019|gb|EFF21813.1| signal recognition particle protein [Enterococcus faecium E1071]
gi|291591529|gb|EFF23182.1| signal recognition particle protein [Enterococcus faecium E1636]
gi|291593943|gb|EFF25427.1| signal recognition particle protein [Enterococcus faecium E1679]
gi|291601357|gb|EFF31635.1| signal recognition particle protein [Enterococcus faecium E1039]
gi|291604211|gb|EFF33712.1| signal recognition particle protein [Enterococcus faecium E1162]
gi|313588547|gb|EFR67392.1| signal recognition particle protein [Enterococcus faecium
TX0133a01]
gi|313593001|gb|EFR71846.1| signal recognition particle protein [Enterococcus faecium TX0133B]
gi|313595279|gb|EFR74124.1| signal recognition particle protein [Enterococcus faecium TX0133A]
gi|313597720|gb|EFR76565.1| signal recognition particle protein [Enterococcus faecium TX0133C]
gi|313642569|gb|EFS07149.1| signal recognition particle protein [Enterococcus faecium
TX0133a04]
gi|313644380|gb|EFS08960.1| signal recognition particle protein [Enterococcus faecium TX0082]
gi|364089611|gb|EHM32283.1| signal recognition particle protein [Enterococcus faecium E4452]
gi|364092330|gb|EHM34712.1| signal recognition particle protein [Enterococcus faecium E4453]
gi|378938890|gb|AFC63962.1| signal recognition particle protein [Enterococcus faecium Aus0004]
gi|388534272|gb|AFK59464.1| Sec family Type I general secretory pathway protein signal
recognition particle protein [Enterococcus faecium DO]
gi|402916210|gb|EJX37106.1| signal recognition particle protein [Enterococcus faecium R501]
gi|402919953|gb|EJX40511.1| signal recognition particle protein [Enterococcus faecium S447]
gi|402924607|gb|EJX44804.1| signal recognition particle protein [Enterococcus faecium V689]
gi|402928616|gb|EJX48462.1| signal recognition particle protein [Enterococcus faecium R499]
gi|402929375|gb|EJX49141.1| signal recognition particle protein [Enterococcus faecium R497]
gi|402930680|gb|EJX50312.1| signal recognition particle protein [Enterococcus faecium R496]
gi|402938666|gb|EJX57652.1| signal recognition particle protein [Enterococcus faecium R446]
gi|402939172|gb|EJX58110.1| signal recognition particle protein [Enterococcus faecium R494]
gi|402941446|gb|EJX60175.1| signal recognition particle protein [Enterococcus faecium P1986]
gi|402951133|gb|EJX69084.1| signal recognition particle protein [Enterococcus faecium P1140]
gi|402951484|gb|EJX69407.1| signal recognition particle protein [Enterococcus faecium P1190]
gi|402952859|gb|EJX70629.1| signal recognition particle protein [Enterococcus faecium P1139]
gi|402953431|gb|EJX71149.1| signal recognition particle protein [Enterococcus faecium P1137]
gi|402959911|gb|EJX77113.1| signal recognition particle protein [Enterococcus faecium P1123]
gi|402966338|gb|EJX82977.1| signal recognition particle protein [Enterococcus faecium ERV69]
gi|402966421|gb|EJX83049.1| signal recognition particle protein [Enterococcus faecium ERV99]
gi|402971075|gb|EJX87376.1| signal recognition particle protein [Enterococcus faecium ERV38]
gi|402972744|gb|EJX88923.1| signal recognition particle protein [Enterococcus faecium ERV26]
gi|402973572|gb|EJX89685.1| signal recognition particle protein [Enterococcus faecium ERV168]
gi|402980395|gb|EJX96006.1| signal recognition particle protein [Enterococcus faecium ERV165]
gi|402984170|gb|EJX99494.1| signal recognition particle protein [Enterococcus faecium ERV102]
gi|402989128|gb|EJY04080.1| signal recognition particle protein [Enterococcus faecium ERV1]
gi|402990604|gb|EJY05473.1| signal recognition particle protein [Enterococcus faecium ERV161]
gi|402992577|gb|EJY07267.1| signal recognition particle protein [Enterococcus faecium E422]
gi|402994145|gb|EJY08702.1| signal recognition particle protein [Enterococcus faecium E417]
gi|402997904|gb|EJY12200.1| signal recognition particle protein [Enterococcus faecium C621]
gi|403009720|gb|EJY23146.1| signal recognition particle protein [Enterococcus faecium C497]
gi|403010704|gb|EJY24057.1| signal recognition particle protein [Enterococcus faecium C1904]
gi|403013586|gb|EJY26670.1| signal recognition particle protein [Enterococcus faecium 513]
gi|403017560|gb|EJY30299.1| signal recognition particle protein [Enterococcus faecium 511]
gi|403018194|gb|EJY30891.1| signal recognition particle protein [Enterococcus faecium 514]
gi|403023055|gb|EJY35348.1| signal recognition particle protein [Enterococcus faecium 509]
gi|403028037|gb|EJY39881.1| signal recognition particle protein [Enterococcus faecium 510]
gi|403033144|gb|EJY44663.1| signal recognition particle protein [Enterococcus faecium 505]
gi|403038537|gb|EJY49749.1| signal recognition particle protein [Enterococcus faecium 504]
gi|403039030|gb|EJY50209.1| signal recognition particle protein [Enterococcus faecium 506]
gi|403039670|gb|EJY50804.1| signal recognition particle protein [Enterococcus faecium 503]
gi|404453120|gb|EKA00214.1| signal recognition particle protein [Enterococcus sp. GMD4E]
gi|404456877|gb|EKA03486.1| signal recognition particle protein [Enterococcus sp. GMD3E]
gi|404462274|gb|EKA08055.1| signal recognition particle protein [Enterococcus sp. GMD2E]
gi|404468030|gb|EKA13066.1| signal recognition particle protein [Enterococcus sp. GMD1E]
gi|410735141|gb|EKQ77057.1| Sec family Type I general secretory pathway protein signal
recognition particle protein [Enterococcus sp. GMD5E]
gi|425723058|gb|EKU85949.1| signal recognition particle protein [Enterococcus durans
FB129-CNAB-4]
gi|430440303|gb|ELA50571.1| signal recognition particle protein [Enterococcus faecium E0045]
gi|430442686|gb|ELA52707.1| signal recognition particle protein [Enterococcus faecium E0120]
gi|430445868|gb|ELA55581.1| signal recognition particle protein [Enterococcus faecium E0164]
gi|430482503|gb|ELA59621.1| signal recognition particle protein [Enterococcus faecium E0333]
gi|430484159|gb|ELA61189.1| signal recognition particle protein [Enterococcus faecium E0269]
gi|430486938|gb|ELA63767.1| signal recognition particle protein [Enterococcus faecium E0679]
gi|430487045|gb|ELA63824.1| signal recognition particle protein [Enterococcus faecium E0680]
gi|430491916|gb|ELA68365.1| signal recognition particle protein [Enterococcus faecium E0688]
gi|430497687|gb|ELA73724.1| signal recognition particle protein [Enterococcus faecium E1050]
gi|430535954|gb|ELA76342.1| signal recognition particle protein [Enterococcus faecium E1133]
gi|430537855|gb|ELA78169.1| signal recognition particle protein [Enterococcus faecium E1185]
gi|430546403|gb|ELA86362.1| signal recognition particle protein [Enterococcus faecium E1552]
gi|430552087|gb|ELA91833.1| signal recognition particle protein [Enterococcus faecium E1573]
gi|430553028|gb|ELA92741.1| signal recognition particle protein [Enterococcus faecium E1574]
gi|430557495|gb|ELA96952.1| signal recognition particle protein [Enterococcus faecium E1575]
gi|430558051|gb|ELA97483.1| signal recognition particle protein [Enterococcus faecium E1576]
gi|430561894|gb|ELB01148.1| signal recognition particle protein [Enterococcus faecium E1578]
gi|430574029|gb|ELB12807.1| signal recognition particle protein [Enterococcus faecium E1622]
gi|430575641|gb|ELB14346.1| signal recognition particle protein [Enterococcus faecium E1620]
gi|430578538|gb|ELB17090.1| signal recognition particle protein [Enterococcus faecium E1623]
gi|430583317|gb|ELB21701.1| signal recognition particle protein [Enterococcus faecium E1627]
gi|430588371|gb|ELB26563.1| signal recognition particle protein [Enterococcus faecium E1634]
gi|430589299|gb|ELB27437.1| signal recognition particle protein [Enterococcus faecium E1630]
gi|430592880|gb|ELB30881.1| signal recognition particle protein [Enterococcus faecium E1731]
gi|430595449|gb|ELB33352.1| signal recognition particle protein [Enterococcus faecium E1904]
gi|430607562|gb|ELB44874.1| signal recognition particle protein [Enterococcus faecium E2071]
gi|430608667|gb|ELB45906.1| signal recognition particle protein [Enterococcus faecium E2134]
gi|430609840|gb|ELB47013.1| signal recognition particle protein [Enterococcus faecium E2297]
gi|430618019|gb|ELB54876.1| signal recognition particle protein [Enterococcus faecium E2883]
gi|430625942|gb|ELB62541.1| signal recognition particle protein [Enterococcus faecium E3346]
gi|430630973|gb|ELB67311.1| signal recognition particle protein [Enterococcus faecium E1321]
gi|430631539|gb|ELB67861.1| signal recognition particle protein [Enterococcus faecium E4215]
gi|430638743|gb|ELB74653.1| signal recognition particle protein [Enterococcus faecium E4389]
gi|430646636|gb|ELB82107.1| signal recognition particle protein [Enterococcus faecium E6045]
gi|430648916|gb|ELB84305.1| signal recognition particle protein [Enterococcus faecium E6012]
gi|445188073|gb|AGE29715.1| Signal recognition particle, subunit Ffh SRP54 [Enterococcus
faecium NRRL B-2354]
Length = 472
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 177/346 (51%), Positives = 252/346 (72%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAI 59
+G E +EL + PTVI++AGLQG GKTT + KLANYLKK + +L+AGDVYRPAAI
Sbjct: 87 LGSETAELNKSPKIPTVIMMAGLQGAGKTTFTGKLANYLKKNENARPLLIAGDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +LG+Q+ VPV+ GTEV P +I +QG+E AK+K D V++DTAGRL ID+ +MDEL
Sbjct: 147 DQLKVLGQQLDVPVFDMGTEVSPVEIVRQGMELAKEKKNDYVLIDTAGRLHIDETLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K + P E+LLVVDAMTGQ+A + +FN ++GITG ++TKLDGD+RGGAALS++ V
Sbjct: 207 KQIKELTQPNEILLVVDAMTGQDAVNVADSFNQQLGITGVVITKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PIK +G GE++ DLE F+PDRMA RILGMGD+L+ +EKAQ+ ++ AEE+ +K+
Sbjct: 267 TGAPIKFIGSGEKLTDLEVFHPDRMASRILGMGDMLTLIEKAQQDYDEKKAEELAQKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+FDFNDF++Q V MG + +I MIPGM ++ + V+ K ++ +AM+ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVMGMGPLEDLIKMIPGMNQVPGIENVKVDPKDVERKKAMVYSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P+LL +P RR+R+A SG + +V++++ Q + R M+ +
Sbjct: 387 ERANPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESRKMMQQM 430
>gi|431771034|ref|ZP_19559423.1| signal recognition particle protein [Enterococcus faecium E1644]
gi|431772480|ref|ZP_19560819.1| signal recognition particle protein [Enterococcus faecium E2369]
gi|430634058|gb|ELB70199.1| signal recognition particle protein [Enterococcus faecium E1644]
gi|430637931|gb|ELB73923.1| signal recognition particle protein [Enterococcus faecium E2369]
Length = 472
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 177/346 (51%), Positives = 252/346 (72%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAI 59
+G E +EL + PTVI++AGLQG GKTT + KLANYLKK + +L+AGDVYRPAAI
Sbjct: 87 LGSETAELNKSPKIPTVIMMAGLQGAGKTTFTGKLANYLKKNENARPLLIAGDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +LG+Q+ VPV+ GTEV P +I +QG+E AK+K D V++DTAGRL ID+ +MDEL
Sbjct: 147 DQLKVLGQQLDVPVFDMGTEVSPVEIVRQGMELAKEKKNDYVLIDTAGRLHIDETLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K + P E+LLVVDAMTGQ+A + +FN ++GITG ++TKLDGD+RGGAALS++ V
Sbjct: 207 KQIKELTQPNEILLVVDAMTGQDAVNVADSFNQQLGITGVVITKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PIK +G GE++ DLE F+PDRMA RILGMGD+L+ +EKAQ+ ++ AEE+ +K+
Sbjct: 267 TGAPIKFIGSGEKLTDLEVFHPDRMASRILGMGDMLTLIEKAQQDYDEKKAEELAQKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+FDFNDF++Q V MG + +I MIPGM ++ + V+ K ++ +AM+ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVVGMGPLEDLIKMIPGMNQVPGIENVKVDPKDVERKKAMVYSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P+LL +P RR+R+A SG + +V++++ Q + R M+ +
Sbjct: 387 ERANPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESRKMMQQM 430
>gi|403234825|ref|ZP_10913411.1| signal recognition particle protein [Bacillus sp. 10403023]
Length = 446
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 179/352 (50%), Positives = 257/352 (73%), Gaps = 4/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ AK PTVI++ GLQG GKTT + KLAN L KK + +LVA D+YRPAAI
Sbjct: 87 MGGEQSKIAVAKRPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ +PV++ G ++ P +IAKQ +E+AK+++ D V++DTAGRL ID+ +MDEL
Sbjct: 147 DQLQTLGKQLNMPVFSLGDKISPVEIAKQAIEKAKEEHHDYVLIDTAGRLHIDEELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K VK V P E+ LVVDAMTGQ+A + +FN +G+TG +LTKLDGD+RGGAALSVK V
Sbjct: 207 KQVKEVAQPDEIFLVVDAMTGQDAVNVAQSFNDLLGLTGVVLTKLDGDTRGGAALSVKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK VG GE+++ +E F+P+RMA RILGMGDVLS +EKAQ + ++ A+E++KK S
Sbjct: 267 TNTPIKFVGLGEKLDAIEAFHPERMASRILGMGDVLSLIEKAQASVDEDKAKELEKKFKS 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+F F+DFL+Q V +MG + ++GM+PG K+ + V+ +K + +EA+I +MT
Sbjct: 327 MSFTFDDFLEQLAQVRKMGPLDEILGMLPGANKMKGLKNVQVDDKQIGHVEAIIRSMTKA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE+PE++ S R+KR+A+ SG+T Q+V++L+ Q M+ MK + + +G
Sbjct: 387 EREQPEIINSS--RKKRIAKGSGRTVQEVNRLLKQFEDMKKMMKQMTNMTKG 436
>gi|417788149|ref|ZP_12435832.1| signal recognition particle, subunit Ffh SRP54 [Lactobacillus
salivarius NIAS840]
gi|334308326|gb|EGL99312.1| signal recognition particle, subunit Ffh SRP54 [Lactobacillus
salivarius NIAS840]
Length = 479
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 180/347 (51%), Positives = 247/347 (71%), Gaps = 6/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E + L + PT+I++ GLQG GKTT ++KLAN LKK+ + ++A DVYRPAAI
Sbjct: 87 MGEEAAPLNKSAKIPTIIMMVGLQGAGKTTTASKLANKLKKEKNARPFMIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ILG+ + VPV++ G +V P +I +QGLEEAK K D VI+DTAGRLQID+ +M EL
Sbjct: 147 DQLKILGKDIDVPVFSLGVDVDPVEIVRQGLEEAKDKKNDYVIIDTAGRLQIDEKLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K + P E+LL VDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAALS++ V
Sbjct: 207 SSIKELAQPDEILLTVDAMTGQNAVEVAKGFNDQLDVTGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK +G+GE+M DL+ FYPDRMA RILGMGD+L+ +EKAQ+ Q+ AEE+ +K+
Sbjct: 267 TGKPIKFIGQGEKMTDLDVFYPDRMASRILGMGDMLTLIEKAQQEYDQKQAEELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
NFDFNDFL Q V MG M +I MIPGM PA ++ K ++ +A++ +MTP
Sbjct: 327 NNFDFNDFLIQMEQVQNMGPMEDIIKMIPGMAN-NPALKNLKVDPKDIEHTKAIVYSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+ERE P+LL +P RR+R+A SG+ Q+V++++ Q QM+ MK +
Sbjct: 386 QERENPDLL--NPSRRRRIAAGSGRPIQEVNRMIKQFKQMQDMMKKM 430
>gi|294622904|ref|ZP_06701817.1| signal recognition particle protein [Enterococcus faecium U0317]
gi|425030604|ref|ZP_18435770.1| signal recognition particle protein [Enterococcus faecium 515]
gi|431301266|ref|ZP_19507585.1| signal recognition particle protein [Enterococcus faecium E1626]
gi|431775548|ref|ZP_19563820.1| signal recognition particle protein [Enterococcus faecium E2560]
gi|291597676|gb|EFF28829.1| signal recognition particle protein [Enterococcus faecium U0317]
gi|403017277|gb|EJY30044.1| signal recognition particle protein [Enterococcus faecium 515]
gi|430580456|gb|ELB18923.1| signal recognition particle protein [Enterococcus faecium E1626]
gi|430642817|gb|ELB78583.1| signal recognition particle protein [Enterococcus faecium E2560]
Length = 472
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 177/346 (51%), Positives = 252/346 (72%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAI 59
+G E +EL + PTVI++AGLQG GKTT + KLANYLKK + +L+AGDVYRPAAI
Sbjct: 87 LGSETAELNKSPKIPTVIMMAGLQGAGKTTFTGKLANYLKKNENARPLLIAGDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +LG+Q+ VPV+ GTEV P +I +QG+E AK+K D V++DTAGRL ID+ +MDEL
Sbjct: 147 DQLKVLGQQLDVPVFDMGTEVSPVEIVRQGMELAKEKKNDYVLIDTAGRLHIDETLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K + P E+LLVVDAMTGQ+A + +FN ++GITG ++TKLDGD+RGGAALS++ V
Sbjct: 207 KQIKELTQPNEILLVVDAMTGQDAVNVADSFNQQLGITGVVITKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PIK +G GE++ DLE F+PDRMA RILGMGD+L+ +EKAQ+ ++ AEE+ +K+
Sbjct: 267 TGAPIKFIGSGEKLTDLEVFHPDRMASRILGMGDMLTLIEKAQQDYDEKKAEELAQKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+FDFNDF++Q V MG + +I MIPGM ++ + V+ K ++ +AM+ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVMGMGPLEDLIKMIPGMNQVPGIENVKVDPKDVERKKAMVYSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P+LL +P RR+R+A SG + +V++++ Q + R M+ +
Sbjct: 387 ERANPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESRKMMQQM 430
>gi|315648170|ref|ZP_07901271.1| signal recognition particle protein [Paenibacillus vortex V453]
gi|315276816|gb|EFU40159.1| signal recognition particle protein [Paenibacillus vortex V453]
Length = 460
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 180/363 (49%), Positives = 259/363 (71%), Gaps = 5/363 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG ++LV + PTVI++AGLQG GKTT S KLA L+KQ +LVAGD+YRPAAI
Sbjct: 87 MGGSQAKLVKSNKPPTVIMMAGLQGAGKTTTSGKLAKLLQKQNSRPLLVAGDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ VPV++ G + P +IAKQGL+ AK D VI+DTAGRL +D+ +M+ELK
Sbjct: 147 QLEVLGEQINVPVFSLGDKTSPVEIAKQGLQHAKDNGHDYVIIDTAGRLHVDEELMEELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+ V+NP EVLLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAALSVK V+
Sbjct: 207 QIHSVVNPDEVLLVVDAMTGQDAVNVAESFNQQLTLTGVVLTKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK GE+++ LEPF+P+RMA RILGMGD+LS +EKAQ + + A+EM++K+ +A
Sbjct: 267 GCPIKFAALGEKIDALEPFHPERMASRILGMGDMLSLIEKAQSNIDADKAKEMERKMRNA 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEE 299
F F DFL+Q V ++G + +++ MIPGMGK+ + ++ EK + +EA++ +MT E
Sbjct: 327 EFTFEDFLEQMDQVKKLGPLDQLMDMIPGMGKMKQTKDLKVDEKQMGRIEAIVHSMTTAE 386
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM--EGGSLPALS 357
+++P+++ + RRKR+A SG + +V++L+ Q +MR MK +M +GG A+
Sbjct: 387 KQQPDIINHN--RRKRIAAGSGTSLAEVNRLIKQFDEMRRVMKQFSDMMGPKGGKNKAMK 444
Query: 358 NLE 360
L+
Sbjct: 445 QLK 447
>gi|418961237|ref|ZP_13513124.1| signal recognition particle protein [Lactobacillus salivarius
SMXD51]
gi|380344904|gb|EIA33250.1| signal recognition particle protein [Lactobacillus salivarius
SMXD51]
Length = 479
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 182/362 (50%), Positives = 252/362 (69%), Gaps = 10/362 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E + L + PT+I++ GLQG GKTT ++KLAN LKK+ + ++A DVYRPAAI
Sbjct: 87 MGEEAAPLNKSAKIPTIIMMVGLQGAGKTTTASKLANKLKKEKNARPFMIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ILG+ + VPV++ G +V P +I +QGLEEAK K D VI+DTAGRLQID+ +M EL
Sbjct: 147 DQLKILGKDIDVPVFSLGIDVDPVEIVRQGLEEAKDKKNDYVIIDTAGRLQIDEKLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K + P E+LL VDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAALS++ V
Sbjct: 207 SSIKELAQPDEILLTVDAMTGQNAVEVAKGFNDQLDVTGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK +G+GE+M DL+ FYPDRMA RILGMGD+L+ +EKAQ+ Q+ AEE+ +K+
Sbjct: 267 TGKPIKFIGQGEKMTDLDVFYPDRMASRILGMGDMLTLIEKAQQEYDQKQAEELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
NFDFNDFL Q V MG M +I MIPGM PA ++ K ++ +A++ +MTP
Sbjct: 327 NNFDFNDFLIQMEQVQNMGPMEDIIKMIPGMAN-NPALKNLKVDPKDIEHTKAIVYSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
+ERE P+LL +P RR+R+A SG+ Q+V++++ Q Q M+++M M G+ +
Sbjct: 386 QERENPDLL--NPSRRRRIAAGSGRPIQEVNRMIKQFKQ----MQDMMKKMSNGNFSGME 439
Query: 358 NL 359
L
Sbjct: 440 GL 441
>gi|227890693|ref|ZP_04008498.1| signal recognition particle protein [Lactobacillus salivarius ATCC
11741]
gi|227867631|gb|EEJ75052.1| signal recognition particle protein [Lactobacillus salivarius ATCC
11741]
Length = 482
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 182/362 (50%), Positives = 252/362 (69%), Gaps = 10/362 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E + L + PT+I++ GLQG GKTT ++KLAN LKK+ + ++A DVYRPAAI
Sbjct: 90 MGEEAAPLNKSAKIPTIIMMVGLQGAGKTTTASKLANKLKKEKNARPFMIAADVYRPAAI 149
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ILG+ + VPV++ G +V P +I +QGLEEAK K D VI+DTAGRLQID+ +M EL
Sbjct: 150 DQLKILGKDIDVPVFSLGVDVDPVEIVRQGLEEAKDKKNDYVIIDTAGRLQIDEKLMQEL 209
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K + P E+LL VDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAALS++ V
Sbjct: 210 SSIKELAQPDEILLTVDAMTGQNAVEVAKGFNDQLDVTGVVLTKLDGDTRGGAALSIRAV 269
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK +G+GE+M DL+ FYPDRMA RILGMGD+L+ +EKAQ+ Q+ AEE+ +K+
Sbjct: 270 TGKPIKFIGQGEKMTDLDVFYPDRMASRILGMGDMLTLIEKAQQEYDQKQAEELAEKMRE 329
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
NFDFNDFL Q V MG M +I MIPGM PA ++ K ++ +A++ +MTP
Sbjct: 330 NNFDFNDFLIQMEQVQNMGPMEDIIKMIPGMAN-NPALKNLKVDPKDIEHTKAIVYSMTP 388
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
+ERE P+LL +P RR+R+A SG+ Q+V++++ Q Q M+++M M G+ +
Sbjct: 389 QERENPDLL--NPSRRRRIAAGSGRPIQEVNRMIKQFKQ----MQDMMKKMSNGNFSGME 442
Query: 358 NL 359
L
Sbjct: 443 GL 444
>gi|167037689|ref|YP_001665267.1| signal recognition particle protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116104|ref|YP_004186263.1| signal recognition particle protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|326389503|ref|ZP_08211070.1| signal recognition particle protein [Thermoanaerobacter ethanolicus
JW 200]
gi|392940886|ref|ZP_10306530.1| LOW QUALITY PROTEIN: signal recognition particle protein
[Thermoanaerobacter siderophilus SR4]
gi|166856523|gb|ABY94931.1| signal recognition particle protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929195|gb|ADV79880.1| signal recognition particle protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|325994508|gb|EGD52933.1| signal recognition particle protein [Thermoanaerobacter ethanolicus
JW 200]
gi|392292636|gb|EIW01080.1| LOW QUALITY PROTEIN: signal recognition particle protein
[Thermoanaerobacter siderophilus SR4]
Length = 446
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 178/347 (51%), Positives = 244/347 (70%), Gaps = 2/347 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S L P VI++ GLQG GKTT KLAN LKKQGK+ +LVA DV RPAAI
Sbjct: 87 MGSTQSRLNIGNKVPAVIMMVGLQGSGKTTACGKLANLLKKQGKNPLLVACDVVRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G V VPV+T G +V P IAK ++ A+ N DV+I+DTAGRL ID+ +M+EL
Sbjct: 147 QLQVVGANVNVPVFTMGDKVNPVDIAKASIDYARSHNSDVIIIDTAGRLHIDEELMEELV 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K+ + P E+LLVVDAMTGQ+A + ++FN + ITG ILTKLDGD+RGGAALS+K V+
Sbjct: 207 NIKKAVQPDEILLVVDAMTGQDAVNVASSFNERLDITGVILTKLDGDTRGGAALSIKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK VG GE++ DLEPFYPDRMA RILGMGDVL+ +EKAQ + ++ A+E+ +K+++
Sbjct: 267 QKPIKYVGTGEKLTDLEPFYPDRMASRILGMGDVLTLIEKAQAAIDEKKAQELGQKLLTK 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F DFL+Q +++ MG + +++ MIPGM K V +EK LK +EA+I++MT EER
Sbjct: 327 QFTLEDFLEQLQSLKNMGPLDQLLSMIPGMNKNMLKNVDISEKDLKRIEAIIQSMTKEER 386
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
+ P ++ S R+KR+A+ SG T QQV+ L+ Q + + MK +
Sbjct: 387 QNPSIINGS--RKKRIAKGSGTTIQQVNSLLKQFEETKKMMKKFADI 431
>gi|164688563|ref|ZP_02212591.1| hypothetical protein CLOBAR_02208 [Clostridium bartlettii DSM
16795]
gi|164602976|gb|EDQ96441.1| signal recognition particle protein [Clostridium bartlettii DSM
16795]
Length = 450
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 181/362 (50%), Positives = 248/362 (68%), Gaps = 8/362 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S++ + PT+I++ GLQG GKTT S KL Y KKQGK +LVA DVYRPAAI
Sbjct: 87 MGDVQSKITISSKPPTIIMMVGLQGAGKTTTSGKLGGYFKKQGKKPLLVACDVYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G+ + + V+ G + P IAK GL A K N D+VI+DTAGRL ID+ +MDELK
Sbjct: 147 QLEVVGKSLDIEVFNMGDKENPVNIAKAGLSHAIKNNNDLVIIDTAGRLHIDEELMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E+LLVVD+MTGQ+A + +F+ +GI G +LTKLDGD+RGGAALS++ V+
Sbjct: 207 SIKSEVRPHEILLVVDSMTGQDAVNVAESFDNALGIDGVVLTKLDGDTRGGAALSIRAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK +G GE+++DLEPF+PDRMA RILGMGDVLS +EKAQE M E A+ + K+
Sbjct: 267 QKPIKFIGMGEKLDDLEPFHPDRMASRILGMGDVLSLIEKAQETMDMEKAKALGAKLKKQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPE 298
FDF DFL Q + +MGSM +++GMIPGMG I V K + ++A+I++MT E
Sbjct: 327 EFDFEDFLDQMEQIQKMGSMDKILGMIPGMGDIKNQLGDVDMNGKEMNRIKAIIQSMTVE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK----NLMGVMEGGSLP 354
ER P++L S R++R+A+ SG + Q+V++L+ QL +M+ MK N G+ + G P
Sbjct: 387 ERRNPQILNAS--RKRRIAKGSGTSVQEVNKLIKQLNEMKKMMKMFTSNSKGMKKRGGFP 444
Query: 355 AL 356
L
Sbjct: 445 GL 446
>gi|374603417|ref|ZP_09676397.1| signal recognition particle protein [Paenibacillus dendritiformis
C454]
gi|374391013|gb|EHQ62355.1| signal recognition particle protein [Paenibacillus dendritiformis
C454]
Length = 457
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 177/349 (50%), Positives = 250/349 (71%), Gaps = 3/349 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG ++L A PTVI++AGLQG GKTT S KLA L+KQ +LVA D+YRPAAI
Sbjct: 87 MGGTAAKLAKANKPPTVIMMAGLQGAGKTTTSGKLAKLLQKQNHKPLLVAADIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG Q+ VPV++ G +V P +IA+Q +E A+ ++D VIVDTAGRL ID+A+M+ELK
Sbjct: 147 QLEVLGAQINVPVFSLGDQVSPVEIARQAMEHARANHLDYVIVDTAGRLHIDEALMEELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+ +NP EVLLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAALSVK V+
Sbjct: 207 QIHETVNPDEVLLVVDAMTGQDAVNVAESFNQQLALTGVVLTKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK GE+++ LEPF+P+RMA RILGMGD+LS +EKAQ + + A+EM+ K+ +A
Sbjct: 267 GCPIKFAALGEKIDALEPFHPERMASRILGMGDMLSLIEKAQANIDADKAKEMEMKMRNA 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT-PAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFL+Q + V ++G + +++ MIPGM K+ A ++ E+ + +EA++ +MT EE
Sbjct: 327 AFTFDDFLEQMQQVKQLGPIDQILDMIPGMNKMKQTANLKVDERQMGRIEAIVRSMTNEE 386
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 348
R+ P+L+ S RRKR+A SG + V++L+ Q +MR MK +M
Sbjct: 387 RQDPDLINHS--RRKRIAAGSGTSLADVNRLIKQFDEMRRMMKQFTEMM 433
>gi|295397866|ref|ZP_06807929.1| signal recognition particle protein [Aerococcus viridans ATCC
11563]
gi|294973911|gb|EFG49675.1| signal recognition particle protein [Aerococcus viridans ATCC
11563]
Length = 484
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 181/361 (50%), Positives = 249/361 (68%), Gaps = 8/361 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAI 59
MGGE ++ FA + PTVI++AGLQG GKTT KLA +LKK K +LVAGD+YRPAAI
Sbjct: 87 MGGEHEDIQFATTPPTVIMMAGLQGAGKTTTVGKLAAFLKKNDHKKPLLVAGDIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ +PV+T G +V P +IA Q +E AK D+V +DTAGRLQID+ +M EL
Sbjct: 147 NQLQTIGQQLDLPVFTLGDQVSPVEIATQAIEYAKMNGHDLVFIDTAGRLQIDERLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
KD+K + P E+LL VD+MTGQEAA + F+ E+ ITG +LTKLDGD+RGGAALS+ V
Sbjct: 207 KDIKAAVEPDEILLTVDSMTGQEAANVAKAFDEELDITGVVLTKLDGDTRGGAALSIVSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ ++E FYPDRMA RILGMGD+L+ +EKAQ + +AE M K+
Sbjct: 267 TGKPIKFTGTGEKLNEIERFYPDRMANRILGMGDMLTLIEKAQAEFDENEAEAMAAKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE-KSLKIMEAMIEAMTPE 298
+DFNDF+K + +MGSM ++ MIPGM K+ + K + +AMI++MTP
Sbjct: 327 NTYDFNDFIKNMDQMNKMGSMKDILKMIPGMNKLGNLDDLNIDPKQMAQTKAMIQSMTPY 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSN 358
ERE P+ + +S RR+R+A+ S T Q+V++L+ Q + R LM M G++ AL N
Sbjct: 387 ERENPDSINQS--RRRRIAKGSATTLQEVNRLIKQFNESR----KLMSAMSNGNMGALQN 440
Query: 359 L 359
+
Sbjct: 441 M 441
>gi|345017770|ref|YP_004820123.1| signal recognition particle protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344033113|gb|AEM78839.1| signal recognition particle protein [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 446
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 178/347 (51%), Positives = 244/347 (70%), Gaps = 2/347 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S L P VI++ GLQG GKTT KLAN LKKQGK+ +LVA DV RPAAI
Sbjct: 87 MGSTQSRLNIGNKVPAVIMMVGLQGSGKTTACGKLANLLKKQGKNPLLVACDVVRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G V VPV+T G +V P IAK ++ A+ N DV+I+DTAGRL ID+ +M+EL
Sbjct: 147 QLQVVGANVNVPVFTMGDKVNPVDIAKASIDYARSHNSDVIIIDTAGRLHIDEELMEELV 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K+ + P E+LLVVDAMTGQ+A + ++FN + ITG ILTKLDGD+RGGAALS+K V+
Sbjct: 207 NIKKAVQPDEILLVVDAMTGQDAVNVASSFNERLDITGVILTKLDGDTRGGAALSIKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK VG GE++ DLEPFYPDRMA RILGMGDVL+ +EKAQ + ++ A+E+ +K+++
Sbjct: 267 QKPIKYVGAGEKLTDLEPFYPDRMASRILGMGDVLTLIEKAQAAIDEKKAQELGQKLLTK 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F DFL+Q +++ MG + +++ MIPGM K V +EK LK +EA+I++MT EER
Sbjct: 327 QFTLEDFLEQLQSLKNMGPLDQLLSMIPGMNKNMLKNVDISEKDLKRIEAIIQSMTKEER 386
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
+ P ++ S R+KR+A+ SG T QQV+ L+ Q + + MK +
Sbjct: 387 QNPSIINGS--RKKRIAKGSGTTIQQVNSLLKQFEETKKMMKKFADI 431
>gi|261408023|ref|YP_003244264.1| signal recognition particle protein [Paenibacillus sp. Y412MC10]
gi|261284486|gb|ACX66457.1| signal recognition particle protein [Paenibacillus sp. Y412MC10]
Length = 460
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 180/363 (49%), Positives = 258/363 (71%), Gaps = 5/363 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG ++L + PTVI++AGLQG GKTT S KLA L+KQ +LVAGD+YRPAAI
Sbjct: 87 MGGSQAKLAKSNKPPTVIMMAGLQGAGKTTTSGKLAKLLQKQNSKPLLVAGDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG Q+ VPV++ G + P +IAKQGL+ AK D VI+DTAGRL +D+ +M+ELK
Sbjct: 147 QLEVLGNQINVPVFSLGDKTSPVEIAKQGLQHAKDNGHDYVIIDTAGRLHVDEELMEELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+ V+NP EVLLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAALSVK V+
Sbjct: 207 QIHSVVNPDEVLLVVDAMTGQDAVNVAESFNQQLTLTGVVLTKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK GE+++ LEPF+P+RMA RILGMGD+LS +EKAQ + + A+EM++K+ +A
Sbjct: 267 GCPIKFAALGEKIDALEPFHPERMASRILGMGDMLSLIEKAQSNIDADKAKEMERKMRNA 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEE 299
F F DFL+Q V ++G + +++ MIPGMGK+ A+ ++ EK + +EA++ +MT E
Sbjct: 327 EFTFEDFLEQMDQVKKLGPLDQLMDMIPGMGKMKQAKDLKVDEKQMGRIEAIVHSMTTAE 386
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM--EGGSLPALS 357
+++P+++ + RRKR+A SG + +V++L+ Q +MR MK +M +GG AL
Sbjct: 387 KQQPDIINHN--RRKRIAAGSGTSLAEVNRLIKQFDEMRRVMKQFSDMMGPKGGKNKALK 444
Query: 358 NLE 360
L+
Sbjct: 445 QLK 447
>gi|340758049|ref|ZP_08694641.1| signal recognition particle protein [Fusobacterium varium ATCC
27725]
gi|251836338|gb|EES64875.1| signal recognition particle protein [Fusobacterium varium ATCC
27725]
Length = 446
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 180/354 (50%), Positives = 248/354 (70%), Gaps = 8/354 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG S L PTV++L+GLQG GKTT + KLANYLKKQG+S ++V DVYRPAAI
Sbjct: 86 LGGTNSRLTKGVRNPTVLMLSGLQGAGKTTFAVKLANYLKKQGESVLMVGADVYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ VPVY I + GL +AK+ N +I+DTAGRL ID+ +M+EL+
Sbjct: 146 QLQVLGEQINVPVYAEEDNKDTVAICEHGLAKAKELNSTYMIIDTAGRLHIDEKLMEELR 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K+ + P E+LLVVDAM GQ+A L FN + I G +LTKLDGD+RGGAALS+K V
Sbjct: 206 SIKKAVRPQEILLVVDAMIGQDAVNLAEAFNNVLSIDGIVLTKLDGDTRGGAALSIKSVV 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GER++D+E F+P+R+ RILGMGDV+S VEKAQ + ++DA+ +++KI +
Sbjct: 266 GKPIKFVGVGERIDDIELFHPERLVSRILGMGDVVSLVEKAQSAIDEDDAKSLEEKIRTQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FD NDFLKQ + + ++GS+ ++ MIPGMG+I + AEK +K +EA+I++MT EER
Sbjct: 326 KFDLNDFLKQLQNIKKLGSLGSILKMIPGMGQI--GDIAPAEKEMKKVEAIIQSMTKEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 354
+KP++L S R+KR+A SG V++L+ Q Q MK +M + GG +P
Sbjct: 384 KKPDILKAS--RKKRIALGSGTEVADVNRLLKQFEQ----MKGMMKMFSGGKMP 431
>gi|452995947|emb|CCQ92348.1| signal recognition particle-like (SRP) GTPase [Clostridium
ultunense Esp]
Length = 446
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 177/345 (51%), Positives = 254/345 (73%), Gaps = 5/345 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAI 59
MGGE + L K P VI++ GLQG GKTT + KLA +LKKQ GK +LVA DVYRPAAI
Sbjct: 87 MGGEAARLELGKKPPAVIMMVGLQGAGKTTTTGKLALHLKKQQGKRSLLVACDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL +LGE +G+PV++ GTEV P +IA+QGLE+A+++++DVVI+DTAGRL +D+ +M EL
Sbjct: 147 KQLQVLGESIGLPVFSMGTEVSPVEIARQGLEKAREEHLDVVIIDTAGRLHVDERLMVEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K++K ++P E+LLVVDAMTGQ+A + +F+ ++ +TG +LTKLDGD+RGGAALSVK V
Sbjct: 207 KEIKAQVHPQEILLVVDAMTGQDAVTVAESFHQQLDLTGVVLTKLDGDTRGGAALSVKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PIK GE++E LEPFYPDRMA RILGMGDVL+ +EKAQ + E A+E+++K+
Sbjct: 267 TGCPIKFAAMGEKLEALEPFYPDRMASRILGMGDVLTLIEKAQAEVDAEKAKELERKLRK 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
A F DFL+Q V ++G + ++ MIPGM ++ ++ EK + +EA+I++MT +E
Sbjct: 327 AEFTLEDFLEQMEQVRKLGPLEDLLAMIPGMNRLKDLKI--DEKQIAHVEAIIKSMTRQE 384
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
++ P+++ S RRKR+AQ SG + +V++L+ Q + + MK L
Sbjct: 385 KQNPQIINYS--RRKRIAQGSGTSLTEVNRLLKQFEETKKMMKQL 427
>gi|329929595|ref|ZP_08283302.1| signal recognition particle protein [Paenibacillus sp. HGF5]
gi|328936240|gb|EGG32692.1| signal recognition particle protein [Paenibacillus sp. HGF5]
Length = 460
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 180/363 (49%), Positives = 258/363 (71%), Gaps = 5/363 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG ++L + PTVI++AGLQG GKTT S KLA L+KQ +LVAGD+YRPAAI
Sbjct: 87 MGGSQAKLAKSNKPPTVIMMAGLQGAGKTTTSGKLAKLLQKQNSRPLLVAGDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG Q+ VPV++ G + P +IAKQGL+ AK D VI+DTAGRL +D+ +M+ELK
Sbjct: 147 QLEVLGNQINVPVFSLGDKTSPVEIAKQGLQHAKDNGHDYVIIDTAGRLHVDEELMEELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+ V+NP EVLLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAALSVK V+
Sbjct: 207 QIHSVVNPDEVLLVVDAMTGQDAVNVAESFNQQLTLTGVVLTKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK GE+++ LEPF+P+RMA RILGMGD+LS +EKAQ + + A+EM++K+ +A
Sbjct: 267 GCPIKFAALGEKIDALEPFHPERMASRILGMGDMLSLIEKAQSNIDADKAKEMERKMRNA 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEE 299
F F DFL+Q V ++G + +++ MIPGMGK+ A+ ++ EK + +EA++ +MT E
Sbjct: 327 EFTFEDFLEQMDQVKKLGPLDQLMDMIPGMGKMKQAKDLKVDEKQMGRIEAIVHSMTTAE 386
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM--EGGSLPALS 357
+++P+++ + RRKR+A SG + +V++L+ Q +MR MK +M +GG AL
Sbjct: 387 KQQPDIINHN--RRKRIAAGSGTSLAEVNRLIKQFDEMRRVMKQFSDMMGPKGGKNKALK 444
Query: 358 NLE 360
L+
Sbjct: 445 QLK 447
>gi|304316926|ref|YP_003852071.1| signal recognition particle protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778428|gb|ADL68987.1| signal recognition particle protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 446
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 175/344 (50%), Positives = 244/344 (70%), Gaps = 2/344 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG + S++ F+ PT+I++ GLQG GKTT S KLANYLK +GK+ +LVA D+YRPAAI
Sbjct: 87 MGSKESKINFSDKPPTIIMMVGLQGSGKTTTSGKLANYLKSKGKNPVLVACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G + VPV++ G + P IAK ++ AK N +VVI+DTAGRL ID+ +MDELK
Sbjct: 147 QLQVVGSSINVPVFSMGDKTTPVDIAKGAVDFAKNNNYNVVIIDTAGRLHIDEELMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K +NP E+LLVVDAMTGQ+ + +FN ++ I G ILTKLDGD+RGGAALSVK V+
Sbjct: 207 NIKDAVNPNEILLVVDAMTGQDVVNVAESFNEKLDIDGVILTKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK + GE++ D+E F+PDRMA RILGMGDVLS +EKAQ + ++ A E+QKKI+
Sbjct: 267 HKPIKFIASGEKLTDIEVFHPDRMASRILGMGDVLSLIEKAQSQIDEKKALELQKKILEQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F F+DFL+Q + + MG + ++ MIPG+ V ++K++K +EA+I++MT EER
Sbjct: 327 QFSFDDFLEQLQGLKNMGPIDQLFSMIPGVNMSKLKGVNVSDKAIKRIEAIIQSMTKEER 386
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+ P ++ S R+KR+A SG + QQV+ L+ Q Q R MK
Sbjct: 387 QNPSIINGS--RKKRIAAGSGTSIQQVNSLIKQFEQTRKMMKQF 428
>gi|291542195|emb|CBL15305.1| signal recognition particle subunit FFH/SRP54 (srp54) [Ruminococcus
bromii L2-63]
Length = 469
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 178/344 (51%), Positives = 250/344 (72%), Gaps = 4/344 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGE + + FA PTVI++ GLQG GKTT +AKLA LKKQG++ +L A DVYRPAAID
Sbjct: 87 MGGEDARIEFASKPPTVIMMCGLQGSGKTTHTAKLAKMLKKQGRNPLLAACDVYRPAAID 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++GE+ GVPV+ G + P +IAK+ ++ AK DVVI+DTAGRL ID+A+MDELK
Sbjct: 147 QLKVVGEKAGVPVFEMG-KANPVKIAKEAIKRAKDYGNDVVILDTAGRLHIDEALMDELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K+ + P E+LLV+D+MTGQ+A + +FN + ITG ILTKLDGD+RGGAALSVK V+
Sbjct: 206 NIKKEVEPNEILLVIDSMTGQDAVNVAKSFNELLDITGVILTKLDGDTRGGAALSVKAVT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK G GE+++D+E F+PDRMA RILGMGDVL+ +E AQ M E AEEM +K+MS
Sbjct: 266 GRPIKFAGTGEKLDDIEVFHPDRMASRILGMGDVLTLIEDAQNKMDAEKAEEMAQKMMSN 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFND Q V +MG + ++ IPG+GK V ++ + ++A+I +MTPEER
Sbjct: 326 KFDFNDLYDQFEQVKKMGPLKGILSKIPGVGKQLEG-VDIDDRQIDWVQAIILSMTPEER 384
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P ++ +P R++R+A SG++ ++V++L+ Q+ QM+ M+ +
Sbjct: 385 SHPHIM--NPSRKRRIAAGSGRSIEEVNRLIKQIDQMQKMMRQM 426
>gi|433655070|ref|YP_007298778.1| signal recognition particle protein [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293259|gb|AGB19081.1| signal recognition particle protein [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 446
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 175/344 (50%), Positives = 243/344 (70%), Gaps = 2/344 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG + S++ F+ PT+I++ GLQG GKTT S KLANYLK +GK+ +LVA D+YRPAAI
Sbjct: 87 MGSKESKINFSDKPPTIIMMVGLQGSGKTTTSGKLANYLKSKGKNPILVACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G + VPV++ G + P IAK ++ AK N +VVI+DTAGRL ID+ +MDELK
Sbjct: 147 QLQVVGSSINVPVFSMGDKTTPVDIAKGAVDFAKNNNYNVVIIDTAGRLHIDEELMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K +NP E+LLVVDAMTGQ+ + +FN ++ I G ILTKLDGD+RGGAALSVK V+
Sbjct: 207 NIKDAVNPNEILLVVDAMTGQDVVNVAESFNEKLDIDGVILTKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK + GE++ D+E F+PDRMA RILGMGDVLS +EKAQ + ++ A E+QKKI+
Sbjct: 267 HKPIKFIASGEKLTDIEVFHPDRMASRILGMGDVLSLIEKAQSQIDEKKALELQKKILEQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F F+DFL+Q + + MG + ++ MIPG+ V ++K +K +EA+I++MT EER
Sbjct: 327 QFSFDDFLEQLQGLKNMGPIDQLFSMIPGVNMSKLKGVNVSDKDIKRIEAIIQSMTKEER 386
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+ P ++ S R+KR+A SG + QQV+ L+ Q Q R MK
Sbjct: 387 QNPSIINGS--RKKRIAAGSGTSIQQVNSLIKQFEQTRKMMKQF 428
>gi|229918605|ref|YP_002887251.1| signal recognition particle protein [Exiguobacterium sp. AT1b]
gi|229470034|gb|ACQ71806.1| signal recognition particle protein [Exiguobacterium sp. AT1b]
Length = 446
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 177/352 (50%), Positives = 253/352 (71%), Gaps = 4/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MG +V + F++ PTV+++ GLQG GKTT + KLAN + KK +S +LVA D+YRPAAI
Sbjct: 87 MGSDVVPITFSQKPPTVVMMVGLQGAGKTTTTGKLANLIRKKHNRSPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +VKP +I + LE AK + D V++DTAGRL ID+ +M EL
Sbjct: 147 KQLETLGKQLDLPVFSLGDQVKPEEIVTKALEYAKTNHHDFVLIDTAGRLHIDETLMGEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++VK + P E+ LVVD+MTGQ+A + +FN ++GITG +LTKLDGD+RGGAALS+K V
Sbjct: 207 ENVKTIAKPNEIFLVVDSMTGQDAVNVADSFNEKLGITGVVLTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PIK VG GE+++ LEPF+P+RMA RILGMGDVLS +EKA+ M Q+ A+E++ KI
Sbjct: 267 TGAPIKFVGLGEKLDALEPFHPERMASRILGMGDVLSLIEKAETQMDQDAAKELESKIRD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
A+F F+DF++Q V MG + ++ M+PG GK+ + V+ EK L +EA+I +MT
Sbjct: 327 ASFTFDDFIEQLAQVKNMGPIDELLSMLPGAGKMKGLKNVQIDEKQLDHVEAIIRSMTKH 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ER PE+L S RRKR+A+ SG++ Q+V++L+ Q M+ MK + G M+G
Sbjct: 387 ERANPEVLNAS--RRKRIAKGSGRSIQEVNRLIKQFDDMKKMMKQMSGQMKG 436
>gi|227551902|ref|ZP_03981951.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Enterococcus faecium
TX1330]
gi|257884147|ref|ZP_05663800.1| signal recognition particle protein [Enterococcus faecium
1,231,501]
gi|257886935|ref|ZP_05666588.1| signal recognition particle protein [Enterococcus faecium
1,141,733]
gi|257895507|ref|ZP_05675160.1| signal recognition particle protein [Enterococcus faecium Com12]
gi|257898122|ref|ZP_05677775.1| signal recognition particle protein [Enterococcus faecium Com15]
gi|293378372|ref|ZP_06624541.1| signal recognition particle protein [Enterococcus faecium PC4.1]
gi|293571524|ref|ZP_06682547.1| signal recognition particle protein [Enterococcus faecium E980]
gi|424766376|ref|ZP_18193729.1| signal recognition particle protein [Enterococcus faecium TX1337RF]
gi|430841665|ref|ZP_19459584.1| signal recognition particle protein [Enterococcus faecium E1007]
gi|430851902|ref|ZP_19469637.1| signal recognition particle protein [Enterococcus faecium E1258]
gi|430855109|ref|ZP_19472820.1| signal recognition particle protein [Enterococcus faecium E1392]
gi|431033237|ref|ZP_19491083.1| signal recognition particle protein [Enterococcus faecium E1590]
gi|431076960|ref|ZP_19494996.1| signal recognition particle protein [Enterococcus faecium E1604]
gi|431108321|ref|ZP_19497472.1| signal recognition particle protein [Enterococcus faecium E1613]
gi|431586239|ref|ZP_19520754.1| signal recognition particle protein [Enterococcus faecium E1861]
gi|431737188|ref|ZP_19526142.1| signal recognition particle protein [Enterococcus faecium E1972]
gi|431739675|ref|ZP_19528595.1| signal recognition particle protein [Enterococcus faecium E2039]
gi|431752200|ref|ZP_19540884.1| signal recognition particle protein [Enterococcus faecium E2620]
gi|431757047|ref|ZP_19545678.1| signal recognition particle protein [Enterococcus faecium E3083]
gi|431762305|ref|ZP_19550867.1| signal recognition particle protein [Enterococcus faecium E3548]
gi|227178974|gb|EEI59946.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Enterococcus faecium
TX1330]
gi|257819985|gb|EEV47133.1| signal recognition particle protein [Enterococcus faecium
1,231,501]
gi|257822989|gb|EEV49921.1| signal recognition particle protein [Enterococcus faecium
1,141,733]
gi|257832072|gb|EEV58493.1| signal recognition particle protein [Enterococcus faecium Com12]
gi|257836034|gb|EEV61108.1| signal recognition particle protein [Enterococcus faecium Com15]
gi|291608390|gb|EFF37689.1| signal recognition particle protein [Enterococcus faecium E980]
gi|292643236|gb|EFF61377.1| signal recognition particle protein [Enterococcus faecium PC4.1]
gi|402410897|gb|EJV43285.1| signal recognition particle protein [Enterococcus faecium TX1337RF]
gi|430494441|gb|ELA70691.1| signal recognition particle protein [Enterococcus faecium E1007]
gi|430542484|gb|ELA82592.1| signal recognition particle protein [Enterococcus faecium E1258]
gi|430547647|gb|ELA87570.1| signal recognition particle protein [Enterococcus faecium E1392]
gi|430564338|gb|ELB03522.1| signal recognition particle protein [Enterococcus faecium E1590]
gi|430566415|gb|ELB05528.1| signal recognition particle protein [Enterococcus faecium E1604]
gi|430569445|gb|ELB08449.1| signal recognition particle protein [Enterococcus faecium E1613]
gi|430593417|gb|ELB31403.1| signal recognition particle protein [Enterococcus faecium E1861]
gi|430598845|gb|ELB36561.1| signal recognition particle protein [Enterococcus faecium E1972]
gi|430604291|gb|ELB41782.1| signal recognition particle protein [Enterococcus faecium E2039]
gi|430614124|gb|ELB51117.1| signal recognition particle protein [Enterococcus faecium E2620]
gi|430619336|gb|ELB56163.1| signal recognition particle protein [Enterococcus faecium E3083]
gi|430624997|gb|ELB61647.1| signal recognition particle protein [Enterococcus faecium E3548]
Length = 472
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 176/346 (50%), Positives = 252/346 (72%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAI 59
+G E +EL + PTVI++AGLQG GKTT + KLANYLKK + +L+AGDVYRPAAI
Sbjct: 87 LGSETAELNKSPKIPTVIMMAGLQGAGKTTFTGKLANYLKKNENARPLLIAGDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +LG+Q+ VPV+ GTEV P +I +QG+E A++K D V++DTAGRL ID+ +MDEL
Sbjct: 147 DQLKVLGQQLDVPVFDMGTEVSPVEIVRQGMELAREKKNDYVLIDTAGRLHIDETLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K + P E+LLVVDAMTGQ+A + +FN ++GITG ++TKLDGD+RGGAALS++ V
Sbjct: 207 KQIKELTQPNEILLVVDAMTGQDAVNVADSFNQQLGITGVVITKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PIK +G GE++ DLE F+PDRMA RILGMGD+L+ +EKAQ+ ++ AEE+ +K+
Sbjct: 267 TGAPIKFIGSGEKLTDLEVFHPDRMASRILGMGDMLTLIEKAQQDYDEKKAEELAQKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+FDFNDF++Q V MG + +I MIPGM ++ + V+ K ++ +AM+ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVMGMGPLEDLIKMIPGMNQVPGIENVKVDPKDVERKKAMVYSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P+LL +P RR+R+A SG + +V++++ Q + R M+ +
Sbjct: 387 ERANPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESRKMMQQM 430
>gi|387793034|ref|YP_006258099.1| signal recognition particle protein [Solitalea canadensis DSM 3403]
gi|379655867|gb|AFD08923.1| signal recognition particle protein [Solitalea canadensis DSM 3403]
Length = 444
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 184/343 (53%), Positives = 238/343 (69%), Gaps = 5/343 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAI 59
MGG VSEL K P++IL+AGL G GKTT + KLANYLK Q GK LVA DVYRPAAI
Sbjct: 86 MGGNVSELDI-KQNPSIILIAGLNGAGKTTFTGKLANYLKTQKGKKPFLVAADVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +L EQ+GVPVYT P +IA+ G+ +AK VVI+DTAGRL ID+ MM+E+
Sbjct: 145 DQLKVLSEQIGVPVYTDYESKDPVKIAEAGIAKAKADGNTVVIIDTAGRLAIDEQMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK P E+L VVD+MTGQ+A FN + TG +LTKLDGD+RGGAALS+K V
Sbjct: 205 ADVKAATKPHEILFVVDSMTGQDAVNTAKAFNDRLDFTGVVLTKLDGDTRGGAALSIKSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+M+ ++ FYPDRMA RILGMGDV+S VE+AQ+ ++ A E+QKKI
Sbjct: 265 VNKPIKFIGTGEKMDAIDVFYPDRMASRILGMGDVVSLVERAQQQFDEKQAAELQKKIRK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ ++GMIPG+GK V + + K +EA+I++MTP E
Sbjct: 325 NKFDFNDFLSQLNQIKKMGNIKDLMGMIPGVGKAIK-DVDIDDDAFKHIEAIIQSMTPTE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
RE PEL+ + RR+R+A SG + +V++L+ Q MR MK
Sbjct: 384 RENPELINGN--RRQRIANGSGTSIAEVNKLLKQFEDMRKMMK 424
>gi|121533796|ref|ZP_01665623.1| signal recognition particle protein [Thermosinus carboxydivorans
Nor1]
gi|121307787|gb|EAX48702.1| signal recognition particle protein [Thermosinus carboxydivorans
Nor1]
Length = 444
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 180/352 (51%), Positives = 247/352 (70%), Gaps = 3/352 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S + + PTV++L GLQG GKTT + KLA+ LKKQ K +LVA DVYRPAAI
Sbjct: 85 MGGTQSRITISSRPPTVVMLVGLQGAGKTTTAGKLAHLLKKQNKRPLLVAADVYRPAAIK 144
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGE++G+PV+T G + P +IA++ +E A D+VI+DTAGRL I++ +MDELK
Sbjct: 145 QLQVLGEKLGLPVFTLGDKESPVRIAQKAIEHALSHARDIVIIDTAGRLHINEQLMDELK 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E+LLVVDAMTGQ+A + FN ++GI G ILTKLDGD+RGGAALSV+ V+
Sbjct: 205 AIKNTVKPHEILLVVDAMTGQDAVTVAEAFNEQLGIDGVILTKLDGDARGGAALSVRAVT 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE+++ LEPFYPDRMA RILGMGDVLS +EKA+E + E A EM+KKI
Sbjct: 265 GRPIKYVGMGEKLDALEPFYPDRMASRILGMGDVLSLIEKAEEAINLEQAREMEKKIRKE 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEE 299
F +DFL Q + + ++G + +++ M+PGMG + Q ++ EK LK +EA+I +MT +E
Sbjct: 325 EFTLDDFLDQLQQLKKLGPLDQLLSMLPGMGNLKKLQGLKFDEKELKHVEAIIRSMTKKE 384
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 351
R P ++ S RRKR+A SG Q V++L+ Q + + MK L + + G
Sbjct: 385 RRDPSIINGS--RRKRIAMGSGTKVQDVNRLLKQFAEAKKMMKRLQEMQKTG 434
>gi|13123461|gb|AAK12834.1|AF238499_1 chloroplast SRP54 precursor [Chlamydomonas reinhardtii]
Length = 549
Score = 354 bits (909), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 196/402 (48%), Positives = 278/402 (69%), Gaps = 15/402 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG ++++ +IL+AGLQGVG+ + KLA YL+ + +L+ DVY AA
Sbjct: 151 MGGGNRGKTWSRASRKIILMAGLQGVGRHC-AGKLALYLRARE---LLLLHDVY--AAHR 204
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL G + VPV+ GT+V P +IAK+G+EEA++ VD VI+DTAGRLQ+D+ MM EL+
Sbjct: 205 QLSA-GAAIDVPVFEDGTDVSPVRIAKKGVEEARRLGVDAVIIDTAGRLQVDEGMMAELR 263
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
DVK + P++ LLVVDAMTGQEAA LV +FN + I+GAILTK+DGDSRGGAALSV+EVS
Sbjct: 264 DVKSAVRPSDTLLVVDAMTGQEAANLVRSFNEAVDISGAILTKMDGDSRGGAALSVREVS 323
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GE+ME LEPFYP+RMA RILGMGDVL+ EKA+ +++EDA++ +++M
Sbjct: 324 GKPIKFVGVGEKMEALEPFYPERMASRILGMGDVLTLYEKAEAAIKEEDAQKTMERLMEE 383
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFL Q + + MG + +++ M+PG KI+ + EAEK + EA+I AM EER
Sbjct: 384 KFDFNDFLNQWKAMNNMGGL-QMLKMMPGFNKISEKHLYEAEKQFGVYEAIIGAMDEEER 442
Query: 301 EKPELLAES-PVRRKRVAQDSGKTEQQVSQLVAQLFQMRVR---MKNLMGVMEGGSLPAL 356
PE+L ++ +RR+RVAQDSGK+E +V++L+A M+ + M L+ + + G+ P
Sbjct: 443 SNPEVLIKNLALRRRRVAQDSGKSEAEVTKLMAAYTSMKAQVGGMSKLLKLQKAGADPQK 502
Query: 357 SN--LEDALKSE-QKAPPGTARRKRRSESRRQFVDPASTRPS 395
+N L++ + S +K PG RRK+ ++ Q ++ RP+
Sbjct: 503 ANSLLQELVASAGKKVAPGKVRRKKEKDALSQGSRASAHRPN 544
>gi|340749889|ref|ZP_08686736.1| signal recognition particle protein [Fusobacterium mortiferum ATCC
9817]
gi|229419531|gb|EEO34578.1| signal recognition particle protein [Fusobacterium mortiferum ATCC
9817]
Length = 449
Score = 354 bits (908), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 179/356 (50%), Positives = 252/356 (70%), Gaps = 8/356 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG + L PTV++LAGLQG GKTT +AKL NYLKKQG+ ++V DVYRPAAI
Sbjct: 86 LGGTNARLTKGVRNPTVLMLAGLQGAGKTTFAAKLGNYLKKQGEKVLMVGADVYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ G+ VY+ I ++GL +AK+ +I+DTAGRL ID+ +MDELK
Sbjct: 146 QLQVLGEQTGIEVYSEENHQDAVGICERGLAKAKELGSTYMIIDTAGRLHIDEKLMDELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++KR+ P E+LLVVDAM GQ+A L +FN + I G +LTKLDGD+RGGAALS+K V
Sbjct: 206 EIKRLTRPQEILLVVDAMIGQDAVNLAESFNNVLNIDGVVLTKLDGDTRGGAALSIKAVV 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GE+++D+E F+P+R+ RILGMGDV+S VEKAQ + +EDA+ +++KI +
Sbjct: 266 GKPIKFVGVGEKIDDIELFHPERLVSRILGMGDVVSLVEKAQSAIDEEDAKSLEEKIRTQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FD +DFLKQ + + ++GS+ ++ MIPGMG+I + AEK +K +EA+I++MT EER
Sbjct: 326 KFDLDDFLKQLQNIKKLGSLGSILKMIPGMGQI--GDLAPAEKEMKKVEAIIQSMTKEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 356
+KPE+L S R++R+A+ SG +++L+ Q QM+ MK + GG +P+L
Sbjct: 384 KKPEILKAS--RKQRIAKGSGTEVADINRLLKQFEQMKAMMK----MFSGGKIPSL 433
>gi|297544730|ref|YP_003677032.1| signal recognition particle protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842505|gb|ADH61021.1| signal recognition particle protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 446
Score = 354 bits (908), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 177/347 (51%), Positives = 243/347 (70%), Gaps = 2/347 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S L P VI++ GLQG GKTT KLAN LKKQGK+ +LVA DV RPAAI
Sbjct: 87 MGSTQSRLNIGNKVPAVIMMVGLQGSGKTTACGKLANLLKKQGKNPLLVACDVVRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G V VPV+T G + P IAK ++ A+ N DV+I+DTAGRL ID+ +M+EL
Sbjct: 147 QLQVVGANVNVPVFTMGDKANPVDIAKASIDYARSHNSDVIIIDTAGRLHIDEELMEELV 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++KR + P E+LLVVDAMTGQ+A + ++FN + ITG ILTKLDGD+RGGAALS+K V+
Sbjct: 207 NIKRAVQPDEILLVVDAMTGQDAVNVASSFNERLDITGVILTKLDGDTRGGAALSIKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK VG GE++ DLEPFYP+RMA RILGMGDVL+ +EKAQ + ++ A+E+ +K+++
Sbjct: 267 QKPIKYVGTGEKLTDLEPFYPNRMASRILGMGDVLTLIEKAQAAIDEKKAQELGQKLLTK 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F DFL+Q +++ MG + +++ MIPGM K V +EK LK +EA+I++MT EER
Sbjct: 327 QFTLEDFLEQLQSLKNMGPLDQLLSMIPGMNKNMLKNVDISEKDLKRIEAIIQSMTKEER 386
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
+ P ++ S R+KR+A+ SG T QQV+ L+ Q + + MK +
Sbjct: 387 QNPSIINGS--RKKRIAKGSGTTIQQVNSLLKQFEETKKMMKKFADI 431
>gi|325955366|ref|YP_004239026.1| signal recognition particle protein [Weeksella virosa DSM 16922]
gi|323437984|gb|ADX68448.1| signal recognition particle protein [Weeksella virosa DSM 16922]
Length = 458
Score = 354 bits (908), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 182/343 (53%), Positives = 243/343 (70%), Gaps = 5/343 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE SEL + + PT+IL+AGLQG GKTT S KLANYLK K+ K +LVAGDVYRPAAI
Sbjct: 86 MGGEHSELTIS-ANPTIILIAGLQGSGKTTFSGKLANYLKTKKNKKPLLVAGDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +LGEQ+GV VY P +IA++ + AK+ +V+I+DTAGRL +D+ MMDE+
Sbjct: 145 NQLKVLGEQIGVEVYAEEENKNPVEIAEKAIAYAKQNGNNVIILDTAGRLAVDQEMMDEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ V NPTE L VVD+MTGQ+A FN + +G +LTKLDGD+RGGAAL++K V
Sbjct: 205 RRVHAATNPTETLFVVDSMTGQDAVNTARAFNDVLDYSGVVLTKLDGDTRGGAALTIKTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK + GE+ME L+ FYP RMA RILGMGDV+S VE+AQE +E+A +QKKI
Sbjct: 265 VDKPIKFISTGEKMEALDLFYPSRMADRILGMGDVVSLVERAQEQFDEEEARRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
NFDF+DFLKQ + + RMG+M ++GMIPG GK V + + K +EA+I +MTP+E
Sbjct: 325 NNFDFDDFLKQIQQIKRMGNMKDLVGMIPGAGKALK-DVEINDDAFKGVEAIIHSMTPQE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
R+ P+++ S R+ R+A+ SG + Q+V+QL+ Q +M MK
Sbjct: 384 RKNPKIIDNS--RKNRIAKGSGTSIQEVNQLLKQFSEMGKMMK 424
>gi|392426862|ref|YP_006467856.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfosporosinus acidiphilus SJ4]
gi|391356825|gb|AFM42524.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfosporosinus acidiphilus SJ4]
Length = 452
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 186/346 (53%), Positives = 247/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG +++ A PTVILL GLQG GKTT +AKLAN LKKQGK +LVA D+YRPAAI
Sbjct: 86 MGGATGKILVAPKPPTVILLLGLQGAGKTTHAAKLANMLKKQGKHPLLVACDIYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ VPV++ G E P+ IA L+ A + DVVI+DTAGRL I++ +MDEL+
Sbjct: 146 QLEVLGEQIKVPVFSMGQE-PPADIALASLKHAYQNGQDVVIIDTAGRLHINEELMDELR 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E+LLVVDAMTGQ+A + +F+ EIG+ G ILTKLDGD+RGGAALS+K V+
Sbjct: 205 AIKTTVKPHEILLVVDAMTGQDAVNVAESFHKEIGLDGVILTKLDGDTRGGAALSIKAVT 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G IK G GE+M+ LEPF+PDRMA RILGMGDVL+ +EKAQE Q+ A+EM++K+
Sbjct: 265 GCTIKFAGTGEKMDALEPFHPDRMASRILGMGDVLTLIEKAQESFDQKKAKEMEQKLRKQ 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F +DFL Q + + +MG +S ++ MIPG+GK V+ EK +EA+I +MT EER
Sbjct: 325 EFTLDDFLDQMQQMKKMGPLSSLLEMIPGVGK-QLKDVKIDEKDTAHIEAIIRSMTLEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
KP L+ +S R+KR+A+ SG + Q+V +L+ Q QM+ MK L G
Sbjct: 384 RKPALIKDS--RKKRIAKGSGTSVQEVGRLLKQFEQMQKMMKQLTG 427
>gi|294783942|ref|ZP_06749264.1| signal recognition particle protein [Fusobacterium sp. 1_1_41FAA]
gi|294479754|gb|EFG27533.1| signal recognition particle protein [Fusobacterium sp. 1_1_41FAA]
Length = 444
Score = 353 bits (907), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 184/362 (50%), Positives = 254/362 (70%), Gaps = 12/362 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI
Sbjct: 86 LGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL +D+ +M+ELK
Sbjct: 146 QLQVLGQQIGVDVYSEEDNKDVVGIATRAIEKAKEINATYMIVDTAGRLHVDETLMNELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++KR + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V
Sbjct: 206 ELKRAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVV 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S
Sbjct: 266 GKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FD NDFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++MT EER
Sbjct: 326 KFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQSMTIEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMGVMEGGS 352
+KP++L S R+ R+A+ SG V++L+ Q QM+ MK NL G+ +GG
Sbjct: 384 KKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNLGGMGKGGK 441
Query: 353 LP 354
P
Sbjct: 442 FP 443
>gi|289423976|ref|ZP_06425768.1| signal recognition particle protein [Peptostreptococcus anaerobius
653-L]
gi|429728356|ref|ZP_19263082.1| signal recognition particle protein [Peptostreptococcus anaerobius
VPI 4330]
gi|289155612|gb|EFD04285.1| signal recognition particle protein [Peptostreptococcus anaerobius
653-L]
gi|429149855|gb|EKX92817.1| signal recognition particle protein [Peptostreptococcus anaerobius
VPI 4330]
Length = 452
Score = 353 bits (906), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 185/367 (50%), Positives = 255/367 (69%), Gaps = 11/367 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S++ F+ PTVI++ GLQG GKTT S KLA YLK QGK+ +LVAGDVYRPAAI
Sbjct: 87 MGDVQSKISFSSKSPTVIMMVGLQGAGKTTTSGKLAGYLKGQGKNPLLVAGDVYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++GE++ + V+T G +V P IAK LE A K D+VI+DTAGRL +D+ +M ELK
Sbjct: 147 QLQVVGEKLDIEVFTLGDKVSPVDIAKAALEHANKNKNDLVIIDTAGRLHVDEVLMQELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K V P E+LLVVDAMTGQ+A + +F+ +GI G +LTK+DGD+RGGAALS++ V+
Sbjct: 207 DIKSVARPQEILLVVDAMTGQDAVNVAESFDTALGIDGVVLTKMDGDTRGGAALSIRAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK VG GE+++++EPFYPDRMA RILGMGDVL+ +EKAQ + E A+E++ K+
Sbjct: 267 KKPIKFVGMGEKLDNIEPFYPDRMASRILGMGDVLTLIEKAQSSLDMEKAKELEAKMRKN 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE---KSLKIMEAMIEAMTP 297
DF DFL Q + ++GS+ +++ MIPGMG + AQ+ + E K LK +A+I++MT
Sbjct: 327 EMDFEDFLNQLEQIQKIGSIDKIMDMIPGMGGM-KAQMGDMEKGKKELKKTKAIIQSMTV 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-----NLMGVMEGGS 352
+ER P +L S R+KR+A+ S T V++L+ Q +M+ MK N+MG M+ G
Sbjct: 386 KERRNPSILNAS--RKKRIARGSATTVADVNRLIKQFNEMKKMMKMFQSGNMMGKMKKGG 443
Query: 353 LPALSNL 359
P L L
Sbjct: 444 FPKLPKL 450
>gi|289578454|ref|YP_003477081.1| signal recognition particle protein [Thermoanaerobacter italicus
Ab9]
gi|289528167|gb|ADD02519.1| signal recognition particle protein [Thermoanaerobacter italicus
Ab9]
Length = 446
Score = 353 bits (906), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 176/347 (50%), Positives = 243/347 (70%), Gaps = 2/347 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S L P VI++ GLQG GKTT KLAN LKKQGK+ +LVA DV RPAAI
Sbjct: 87 MGSTQSRLNIGNKVPAVIMMVGLQGSGKTTACGKLANLLKKQGKNPLLVACDVVRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G V VPV+T G + P IAK ++ A+ N DV+I+DTAGRL ID+ +M+EL
Sbjct: 147 QLQVVGANVNVPVFTMGDKANPVDIAKASIDYARSHNSDVIIIDTAGRLHIDEELMEELV 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++KR + P E+LLVVDAMTGQ+A + ++FN + ITG +LTKLDGD+RGGAALS+K V+
Sbjct: 207 NIKRAVQPDEILLVVDAMTGQDAVNVASSFNERLDITGVVLTKLDGDTRGGAALSIKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK VG GE++ DLEPFYP+RMA RILGMGDVL+ +EKAQ + ++ A+E+ +K+++
Sbjct: 267 QKPIKYVGTGEKLTDLEPFYPNRMASRILGMGDVLTLIEKAQAAIDEKKAQELGQKLLTK 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F DFL+Q +++ MG + +++ MIPGM K V +EK LK +EA+I++MT EER
Sbjct: 327 QFTLEDFLEQLQSLKNMGPLDQLLSMIPGMNKNMLKNVDISEKDLKRIEAIIQSMTKEER 386
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
+ P ++ S R+KR+A+ SG T QQV+ L+ Q + + MK +
Sbjct: 387 QNPSIINGS--RKKRIAKGSGTTIQQVNSLLKQFEETKKMMKKFADI 431
>gi|442804649|ref|YP_007372798.1| signal recognition particle protein Ffh [Clostridium stercorarium
subsp. stercorarium DSM 8532]
gi|442740499|gb|AGC68188.1| signal recognition particle protein Ffh [Clostridium stercorarium
subsp. stercorarium DSM 8532]
Length = 447
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 172/342 (50%), Positives = 245/342 (71%), Gaps = 2/342 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG V++L + S PTV ++ GLQG GKTTV KLANYL+KQGK +LVA DVYRPAA+
Sbjct: 87 MGGAVAKLTVSPSPPTVYMMVGLQGAGKTTVCGKLANYLRKQGKRPLLVACDVYRPAAVK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+Q+ +PV+ GT P +IAK+ ++ A+ D VI+DTAGRL ID+ +M EL+
Sbjct: 147 QLQVLGKQIDIPVFEMGTGTSPVEIAKKSVDYARSMQFDTVIIDTAGRLHIDEELMHELE 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + P E+LLVVD+MTGQ+A + +FN + I G ILTKLDGD+RGGAALS K V+
Sbjct: 207 NIKLSVKPHEILLVVDSMTGQDAVNVAESFNNRLDIDGIILTKLDGDTRGGAALSTKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKP+K VG GE++ D EPFYPDRMA RILGMGDVL+ +EKAQ ++ A E++KK+ +
Sbjct: 267 GKPVKFVGIGEKLSDFEPFYPDRMASRILGMGDVLTLIEKAQASFDEKKALELEKKLRTQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F +DFL+Q + + MG +S+ +GM+PG+ ++ EK + +EA+I++MT +ER
Sbjct: 327 QFTLDDFLEQLQQIKNMGPISQFLGMLPGVNSKVLKDIQIDEKQMVYVEAIIQSMTKKER 386
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
E P ++ S R++R+A+ SG + QQV+Q++ Q Q++ MK
Sbjct: 387 ENPSIINSS--RKRRIAEGSGTSIQQVNQVLKQFEQVKKMMK 426
>gi|260583609|ref|ZP_05851357.1| signal recognition particle protein [Granulicatella elegans ATCC
700633]
gi|260158235|gb|EEW93303.1| signal recognition particle protein [Granulicatella elegans ATCC
700633]
Length = 478
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 178/358 (49%), Positives = 251/358 (70%), Gaps = 8/358 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S F+ PTV+++ GLQG GKTT + KLA++L K + K +LVA DVYRPAAI
Sbjct: 87 MGGEQSPFQFSPKPPTVVMMIGLQGAGKTTTAGKLASFLAKHENKRPLLVAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ PV++ GT+V P +IA+Q +E A + D+VI+DTAGRL ID+A+M+EL
Sbjct: 147 DQLQTLGKQLNYPVFSLGTDVNPVEIARQAIERATIEGRDLVIIDTAGRLHIDEALMEEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+++K V NP E+LLVVD MTGQ+A + TFN + ITG ILTKLDGD+RGGAALS++ V
Sbjct: 207 QNIKAVANPNEILLVVDVMTGQDAVNVAETFNERLDITGVILTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK GRGE++ED E FYP+RMA RILGMGD+++ +EKAQ+ + A+EM KI +
Sbjct: 267 TGKPIKFSGRGEKLEDFEIFYPERMASRILGMGDIMTLIEKAQQDFDEAKAQEMADKIKA 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
FDFNDF+ Q V +MG + ++ MIPG+ KI ++ K M+A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVNKMGPLEDILKMIPGLNKIPGLNDLKVDPKDTARMKAIVLSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 356
ERE P++L+++ RRKR+A S + +V++L+ Q + K +M M G++ A+
Sbjct: 387 ERENPDILSQA--RRKRIAAGSARPLAEVNRLIKQFNE----SKKMMNQMSNGNMQAM 438
>gi|392957499|ref|ZP_10323022.1| signal recognition particle protein [Bacillus macauensis ZFHKF-1]
gi|391876462|gb|EIT85059.1| signal recognition particle protein [Bacillus macauensis ZFHKF-1]
Length = 447
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 174/346 (50%), Positives = 255/346 (73%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAI 59
+GGE S+L PTVI++ GLQG GKTT + KLAN+L+K+ + +LVA D+YRPAAI
Sbjct: 87 LGGEQSKLAVGTKPPTVIMMVGLQGAGKTTTTGKLANHLRKKLNRQPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IA + LE+AK ++ D VI+DTAGRL ID+ +M+EL
Sbjct: 147 QQLETLGKQLSLPVFSMGDQVSPVEIATKALEKAKAEHYDYVIIDTAGRLHIDEVLMEEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ VK + NP E+LLVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS+K V
Sbjct: 207 QQVKEIANPHEILLVVDSMTGQDAVNVAESFNEKLGVTGVVLTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+M+ LEPF+PDRM+ RILGMGDVL+ +EKAQ + +E A+E+QKK+
Sbjct: 267 TNLPIKFAGMGEKMDALEPFHPDRMSSRILGMGDVLTLIEKAQTTVDEEKAKELQKKMRD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+F F+DFL+Q V +G + +++GM+PG GK+ + V EK + +EA+I++MT
Sbjct: 327 MSFTFDDFLEQMGQVRNLGPLDQLLGMMPGAGKMKGLKNVSIDEKQISHVEAIIKSMTKL 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ERE+PE+++ S R++R+A SG+T Q+V++L+ Q M+ MK +
Sbjct: 387 EREQPEIISAS--RKRRIANGSGRTVQEVNRLIKQFEDMKKMMKQM 430
>gi|227536075|ref|ZP_03966124.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Sphingobacterium
spiritivorum ATCC 33300]
gi|227243972|gb|EEI93987.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Sphingobacterium
spiritivorum ATCC 33300]
Length = 445
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 187/345 (54%), Positives = 242/345 (70%), Gaps = 5/345 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG V+EL +K+ PTVIL+AGL G GKTT S KLANYLK K+GK +LVAGDVYRPAAI
Sbjct: 86 MGGAVTELDISKN-PTVILIAGLNGAGKTTFSGKLANYLKDKKGKKPLLVAGDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +LG QVGVPV+ P IA+ G+EEAK+ +VVI+DTAGRL ID+A+M E+
Sbjct: 145 DQLEVLGGQVGVPVFVNRESNDPIAIAQAGVEEAKRNGHNVVIIDTAGRLAIDEALMVEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK P E+L VVD+MTGQ+A FN + TG +LTKLDGD+RGGAALS+K V
Sbjct: 205 TAVKEATKPQEILFVVDSMTGQDAVNTAKAFNDRLDFTGVVLTKLDGDTRGGAALSIKSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+ME L+ FYPDRMA RILGMGDV+S VE+AQ+ ++ A E+QKKI
Sbjct: 265 VNKPIKFIGTGEKMEALDVFYPDRMASRILGMGDVVSLVERAQQQFDEKQAAELQKKIRK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDF Q + + +MG+M ++GMIPG+GK V + + K +EA+I++MTP E
Sbjct: 325 NKFDFNDFKSQIQQIKKMGNMKDLMGMIPGVGKAL-KDVEVDDNAFKPIEAIIDSMTPFE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
RE P+ + + RR R+A+ SG +V++L+ Q MR MK +
Sbjct: 384 RENPDAIDQK--RRIRIAKGSGTDINEVNKLMKQFGDMRKVMKQM 426
>gi|315917604|ref|ZP_07913844.1| signal recognition particle protein [Fusobacterium gonidiaformans
ATCC 25563]
gi|313691479|gb|EFS28314.1| signal recognition particle protein [Fusobacterium gonidiaformans
ATCC 25563]
Length = 449
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 176/359 (49%), Positives = 255/359 (71%), Gaps = 8/359 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG + L A PTV++L+GLQG GKTT + KLA +LKKQ + +LVA DVYRPAAI
Sbjct: 86 LGGTNARLTKAPKNPTVLMLSGLQGAGKTTFAGKLAKFLKKQNEKVLLVAADVYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+QV V VY I ++ LE+AK+++ +I+DTAGRL ID+A+M+EL+
Sbjct: 146 QLQVLGQQVDVAVYAEEGHQDVLGICERALEKAKEEHATYMIIDTAGRLHIDEALMEELR 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++KR+ P E+LLVVD+M GQ+A L +FN + I G +LTKLDGD+RGGAALS+K V
Sbjct: 206 NIKRLTRPQEILLVVDSMIGQDAVNLAKSFNESLSIDGVVLTKLDGDTRGGAALSIKSVV 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE+++D+E F+PDR+ RILGMGDV+S VEKAQ +++EDA+ +++KI +
Sbjct: 266 GKPIKFIGVGEKLDDIELFHPDRLVSRILGMGDVVSLVEKAQSAIEEEDAKSLEEKIRTQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FD NDFLKQ + + ++GS+ ++ +IPGMG+I + AEK +K +EA+I++MT +ER
Sbjct: 326 KFDLNDFLKQLQNIKKLGSLGSILKLIPGMGQI--GDLAPAEKEMKKVEAIIQSMTKQER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 359
+KPE+L S R++R+A+ SG +++L+ Q QM+ MK + GG +P NL
Sbjct: 384 KKPEILKAS--RKQRIAKGSGTDVADINRLLKQFDQMKTMMK----MFAGGKMPNFPNL 436
>gi|402818507|ref|ZP_10868090.1| signal recognition particle protein Ffh [Paenibacillus alvei DSM
29]
gi|402503973|gb|EJW14505.1| signal recognition particle protein Ffh [Paenibacillus alvei DSM
29]
Length = 460
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 179/349 (51%), Positives = 248/349 (71%), Gaps = 3/349 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG ++L A PTVI++ GLQG GKTT S KLA L+KQ +LVA D+YRPAAI
Sbjct: 87 MGGTAAKLAKANKPPTVIMMVGLQGAGKTTTSGKLAKMLQKQNHKPLLVAADIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++GEQ+ VPV+ G +V P +IA++GLE AK+ ++D VI+DTAGRL ID+A+M+ELK
Sbjct: 147 QLQVVGEQIKVPVFALGDQVSPVEIARRGLEHAKENHLDYVIIDTAGRLHIDEALMEELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
V P EVLLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAALSVK V+
Sbjct: 207 QVHATAKPDEVLLVVDAMTGQDAVNVADSFNQQLELTGVVLTKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK GE+M+ LEPF+P+RMA RILGMGD+LS +EKAQ + E A+EM+ K+ +A
Sbjct: 267 GCPIKFATLGEKMDALEPFHPERMASRILGMGDMLSLIEKAQANIDTEKAKEMEMKMRNA 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT-PAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFL+Q + V ++G + +++ MIPGM K+ A ++ E+ + +EA++ +MT EE
Sbjct: 327 AFTFDDFLEQMQQVKKLGPIDQILDMIPGMNKMKQNANLKVDERQMGRIEAIVRSMTNEE 386
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 348
R+ P+L+ S RRKR+A SG V++L+ Q +MR MK +M
Sbjct: 387 RQDPDLINHS--RRKRIAAGSGTALADVNRLIKQFDEMRRMMKQFSDMM 433
>gi|172057910|ref|YP_001814370.1| signal recognition particle protein [Exiguobacterium sibiricum
255-15]
gi|171990431|gb|ACB61353.1| signal recognition particle protein [Exiguobacterium sibiricum
255-15]
Length = 450
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 179/354 (50%), Positives = 252/354 (71%), Gaps = 10/354 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MG EVS L + PTVI++ GLQG GKTT KLAN+L KKQ +S +LVA D+YRPAAI
Sbjct: 87 MGSEVSPLTLSNRPPTVIMMTGLQGAGKTTTVGKLANHLRKKQNRSPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +I L+ AK+ + D+V++DTAGRL ID+ +M EL
Sbjct: 147 KQLETLGKQLELPVFSMGDQVSPQEIVTNALDYAKEHHHDIVLIDTAGRLHIDEDLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + P E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS+K V
Sbjct: 207 VDVKEIAKPNEIFLVVDSMTGQDAVNVAQSFNEKLGVTGVVLTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PIK VG GE+++ +EPFYP+RMA RILGMGD+L+ +EKA+ M A+E++ K+
Sbjct: 267 TGAPIKFVGLGEKLDAIEPFYPERMASRILGMGDMLTLIEKAESQMDATRAKELEGKMRD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK-----ITPAQVREAEKSLKIMEAMIEA 294
A+F F+DF++Q + V +MG + ++GMIPG GK + AQ+ EK L +EA+I++
Sbjct: 327 ASFTFDDFIEQLQQVKQMGPLDELLGMIPGAGKGKMKGLKNAQID--EKQLVYVEAIIQS 384
Query: 295 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 348
MT ER +PE+L S RRKR+A+ SG++ Q+V++L+ Q MR MK G M
Sbjct: 385 MTKRERTEPEILNAS--RRKRIARGSGRSIQEVNRLIKQFEDMRKMMKQFSGQM 436
>gi|262065932|ref|ZP_06025544.1| signal recognition particle protein [Fusobacterium periodonticum
ATCC 33693]
gi|291380412|gb|EFE87930.1| signal recognition particle protein [Fusobacterium periodonticum
ATCC 33693]
Length = 444
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 184/362 (50%), Positives = 254/362 (70%), Gaps = 12/362 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI
Sbjct: 86 LGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL ID+ +M+ELK
Sbjct: 146 QLQVLGQQIGVDVYSEEDNKDVVGIATRAIEKAKEINATYMIVDTAGRLHIDETLMNELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K+ + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V
Sbjct: 206 ELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVV 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S
Sbjct: 266 GKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FD NDFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++MT EER
Sbjct: 326 KFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQSMTIEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMGVMEGGS 352
+KP++L S R+ R+A+ SG V++L+ Q QM+ MK NL G+ +GG
Sbjct: 384 KKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNLGGMGKGGK 441
Query: 353 LP 354
P
Sbjct: 442 FP 443
>gi|317059129|ref|ZP_07923614.1| signal recognition particle protein [Fusobacterium sp. 3_1_5R]
gi|313684805|gb|EFS21640.1| signal recognition particle protein [Fusobacterium sp. 3_1_5R]
Length = 449
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 176/359 (49%), Positives = 255/359 (71%), Gaps = 8/359 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG + L A PTV++L+GLQG GKTT + KLA +LKKQ + +LVA DVYRPAAI
Sbjct: 86 LGGTNARLTKAPKNPTVLMLSGLQGAGKTTFAGKLAKFLKKQNEKVLLVAADVYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+QV V VY I ++ LE+AK+++ +I+DTAGRL ID+A+M+EL+
Sbjct: 146 QLQVLGQQVDVAVYAEEGHQDVLGICERALEKAKEEHATYMIIDTAGRLHIDEALMEELR 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++KR+ P E+LLVVD+M GQ+A L +FN + I G +LTKLDGD+RGGAALS+K V
Sbjct: 206 NIKRLTRPQEILLVVDSMIGQDAVNLAKSFNESLSIDGVVLTKLDGDTRGGAALSIKSVV 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE+++D+E F+PDR+ RILGMGDV+S VEKAQ +++EDA+ +++KI +
Sbjct: 266 GKPIKFIGVGEKLDDIELFHPDRLVSRILGMGDVVSLVEKAQSAIEEEDAKSLEEKIRTQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FD NDFLKQ + + ++GS+ ++ +IPGMG+I + AEK +K +EA+I++MT +ER
Sbjct: 326 KFDLNDFLKQLQNIKKLGSLGSILKLIPGMGQI--GDLAPAEKEMKKVEAIIQSMTKQER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 359
+KPE+L S R++R+A+ SG +++L+ Q QM+ MK + GG +P NL
Sbjct: 384 KKPEILKAS--RKQRIARGSGTDVADINRLLKQFDQMKTMMK----MFAGGKMPNFPNL 436
>gi|407477591|ref|YP_006791468.1| Signal recognition particle protein [Exiguobacterium antarcticum
B7]
gi|407061670|gb|AFS70860.1| Signal recognition particle protein [Exiguobacterium antarcticum
B7]
Length = 450
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 180/354 (50%), Positives = 253/354 (71%), Gaps = 10/354 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MG EVS L + PTVI++ GLQG GKTT + KLAN+L KKQ +S +LVA D+YRPAAI
Sbjct: 87 MGSEVSPLTLSNRPPTVIMMTGLQGAGKTTTTGKLANHLRKKQNRSPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +I L+ AK+ + D+V++DTAGRL ID+ +M EL
Sbjct: 147 KQLETLGKQLELPVFSMGDQVSPQEIVTGALDYAKEHHHDIVLIDTAGRLHIDEDLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + P E+ LVVD+MTGQ+A + +FN ++G+TG ILTKLDGD+RGGAALS+K V
Sbjct: 207 VDVKEIAKPNEIFLVVDSMTGQDAVNVAESFNEKLGVTGVILTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PIK VG GE+++ +EPFYP+RMA RILGMGD+L+ +EKA+ M A+E++ K+
Sbjct: 267 TGAPIKFVGLGEKLDAIEPFYPERMASRILGMGDMLTLIEKAEFQMDATRAKELEGKMRD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK-----ITPAQVREAEKSLKIMEAMIEA 294
A+F F+DF++Q + V +MG + ++GMIPG GK + AQ+ EK L +EA+I++
Sbjct: 327 ASFTFDDFIEQLQQVKQMGPLDELLGMIPGAGKGKMKGLKNAQI--DEKQLVYVEAIIQS 384
Query: 295 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 348
MT ER +PE+L S RRKR+A+ SG++ Q+V++L+ Q MR MK G M
Sbjct: 385 MTKRERTEPEILNAS--RRKRIARGSGRSIQEVNRLIKQFEDMRKMMKQFSGQM 436
>gi|410584603|ref|ZP_11321705.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermaerobacter subterraneus DSM 13965]
gi|410504189|gb|EKP93701.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermaerobacter subterraneus DSM 13965]
Length = 445
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 177/345 (51%), Positives = 249/345 (72%), Gaps = 5/345 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG+ + L P V++L GLQG GKTT +AKLA L +QG+ +LVA DVYRPAA++
Sbjct: 87 MGGQHARLDLGGELPAVVMLVGLQGSGKTTTAAKLARLLTRQGRQPLLVAADVYRPAAVE 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLV LG+QV VPVY GT+ P IA++G+ EA+++ DVV++DTAGRL ID A+M+EL+
Sbjct: 147 QLVTLGQQVQVPVYAPGTDRDPVDIAREGVAEARRRGRDVVLIDTAGRLHIDDALMEELE 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+++ + P E+LLVVDAMTGQ+A + TF+ +GI G ILTKLDGD+RGGAALSV+ V+
Sbjct: 207 RIRQAVAPREILLVVDAMTGQDAVNVAETFHRRLGIDGVILTKLDGDARGGAALSVRAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK G GER++ LEPF+P+RMA RILGMGDVLS +EKAQ V + A+ +++K+
Sbjct: 267 GRPIKFAGLGERVDQLEPFHPERMASRILGMGDVLSLIEKAQAVFDAQQAQRLERKLREQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FD DFL+Q R V +MG + +++ MIPG+ G++ V E E L+ +EA+I++MTPEE
Sbjct: 327 AFDLEDFLEQLRQVRKMGPLDQLLAMIPGLGGRLKDVTVDERE--LRRIEAIIQSMTPEE 384
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
R +PE++ S RR+R+A SG Q V++L+ Q + + MK +
Sbjct: 385 RRRPEIINAS--RRRRIAMGSGTRVQDVNRLLKQFAETQRLMKQV 427
>gi|210622533|ref|ZP_03293226.1| hypothetical protein CLOHIR_01174 [Clostridium hiranonis DSM 13275]
gi|210154168|gb|EEA85174.1| hypothetical protein CLOHIR_01174 [Clostridium hiranonis DSM 13275]
Length = 453
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 177/353 (50%), Positives = 249/353 (70%), Gaps = 7/353 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S+++ + PTVI++ GLQG GKTT + KL Y KKQGK +LVA DVYRPAAI
Sbjct: 87 MGDVQSKIMISSKPPTVIMMVGLQGAGKTTTAGKLGGYFKKQGKKPLLVACDVYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++GE++ +PV+ G + P IAK GL A+K D+VI+DTAGRL +D+ +M+ELK
Sbjct: 147 QLQVVGEKLDIPVFAMGDKENPVNIAKAGLSHAQKNGNDMVIIDTAGRLHVDEVLMEELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + P E+LL VDAMTGQ+A + +FN +GI G +LTKLDGD+RGGAALS++ V+
Sbjct: 207 NIKSEVRPHEILLTVDAMTGQDAVNVAESFNDALGIDGVVLTKLDGDTRGGAALSIRAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK +G GE++EDLEPF+PDRMA RILGMGDVLS +EKAQE + E A+E++KK+
Sbjct: 267 KKPIKFIGMGEKLEDLEPFHPDRMASRILGMGDVLSLIEKAQEAVDIEKAKELEKKMRKQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE----KSLKIMEAMIEAMT 296
FDF D L Q + +MGSM +++GM+PGM + Q+ + + K +K A+I++MT
Sbjct: 327 EFDFEDLLDQFEQLKKMGSMDKLLGMMPGMANMK-NQIGDVDLQNNKDMKRSMAIIQSMT 385
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME 349
EER P +L S R+KR+A+ SG + Q+V++L+ QL +M+ MK G+ +
Sbjct: 386 VEERRNPSILNAS--RKKRIAKGSGTSVQEVNRLIKQLNEMKKMMKMFTGMTQ 436
>gi|157692277|ref|YP_001486739.1| signal recognition particle protein Ffh [Bacillus pumilus SAFR-032]
gi|157681035|gb|ABV62179.1| signal recognition particle protein Ffh [Bacillus pumilus SAFR-032]
Length = 446
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 176/352 (50%), Positives = 258/352 (73%), Gaps = 4/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ AK PTVI++ GLQG GKTT + KLAN L KK + M+VA D+YRPAAI
Sbjct: 87 MGGEESKIAVAKKSPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMMVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D VI+DTAGRL ID+ +MDEL
Sbjct: 147 QQLQTLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEEHHDYVILDTAGRLHIDEELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ VK V NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V
Sbjct: 207 QKVKEVANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK GE+++ +EPF+P+RMA RILGMGDVL+ +EKAQ + Q+ A+E+++K+ +
Sbjct: 267 TNTPIKFAALGEKLDAIEPFHPERMASRILGMGDVLTLIEKAQANVDQDKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+F +DFL+Q V MG + +I M+PG GK+ + V+ EK L +EA+I++MT E
Sbjct: 327 MSFTLDDFLEQLGQVRNMGPLDELIQMMPGAGKMKGLKNVQVDEKQLNHIEAIIKSMTTE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
E+E+PE++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 387 EKEQPEVINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|269124183|ref|YP_003306760.1| signal recognition particle protein [Streptobacillus moniliformis
DSM 12112]
gi|268315509|gb|ACZ01883.1| signal recognition particle protein [Streptobacillus moniliformis
DSM 12112]
Length = 443
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 174/359 (48%), Positives = 247/359 (68%), Gaps = 5/359 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG+ + L + S+PT+I+L GLQG GKTT + KLA +LKK+ L+ DVYRPAA
Sbjct: 86 LGGQNTSLNKSTSKPTIIMLVGLQGAGKTTFAGKLAKFLKKEKSKAFLIGADVYRPAAKK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL++L Q+GVP ++ +I GL EAKK++ D V++DTAGRL +D+A+M EL+
Sbjct: 146 QLMVLANQIGVPFFSIEDSNNVLEIVNNGLLEAKKEDADYVLIDTAGRLHVDEALMQELQ 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
DVK +NPTE+LLVVD MTGQ+A + TFN + ITG ++TKLDGD+RGGAALS+KE+S
Sbjct: 206 DVKSSVNPTEILLVVDGMTGQDAVNVAKTFNDVLDITGVVVTKLDGDTRGGAALSIKEIS 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK + GE+++D+ F+P+R+A RILGMGDV+S VEKA+E + +++A EM+ K
Sbjct: 266 GKPIKYISEGEKLDDIAVFHPERLASRILGMGDVVSLVEKAKEAIDEKEAREMEAKFRKN 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQ + + RMGS+ ++ M+PGMG + + AEK +K +EA+I +MT EER
Sbjct: 326 QFDFEDFLKQFKMIKRMGSLGGILKMLPGMGALGDIDLTGAEKEMKKVEAIIYSMTVEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 359
P LL S R+ R+A+ SG QV++L+ Q Q MK +M + G++P +
Sbjct: 386 RNPNLLKVSS-RKIRIAKGSGTDVTQVNKLLKQFEQ----MKQMMKMFNSGNIPGFGQI 439
>gi|421860554|ref|ZP_16292660.1| GTPase [Paenibacillus popilliae ATCC 14706]
gi|410829740|dbj|GAC43097.1| GTPase [Paenibacillus popilliae ATCC 14706]
Length = 457
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 175/349 (50%), Positives = 250/349 (71%), Gaps = 3/349 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG ++L A PTVI++AGLQG GKTT S KLA L+KQ +LVA D+YRPAAI
Sbjct: 87 MGGTAAKLAKANKPPTVIMMAGLQGAGKTTTSGKLAKLLQKQNHKPLLVAADIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG Q+ VPV++ G +V P +IA+Q +E A+ ++D VIVDTAGRL ID+A+M+ELK
Sbjct: 147 QLEVLGAQINVPVFSLGDQVSPVEIARQAMEHARVNHLDYVIVDTAGRLHIDEALMEELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+ +NP EVLLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAALSVK V+
Sbjct: 207 QIHETVNPDEVLLVVDAMTGQDAVNVAESFNQQLALTGVVLTKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK GE+++ LEPF+P+RMA RILGMGD+LS +EKAQ + + A+EM+ K+ +A
Sbjct: 267 GCPIKFAALGEKIDALEPFHPERMASRILGMGDMLSLIEKAQANIDADKAKEMEMKMRNA 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT-PAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFL+Q + V ++G + +++ MIPGM K+ A ++ E+ + +EA++ +MT +E
Sbjct: 327 AFTFDDFLEQMQQVKQLGPIDQILDMIPGMNKMKQTANLKVDERQMGRIEAIVRSMTNKE 386
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 348
R+ P+++ S RRKR+A SG + V++L+ Q +MR MK +M
Sbjct: 387 RQDPDMINHS--RRKRIAAGSGTSLADVNRLIKQFDEMRRMMKQFTEMM 433
>gi|336400339|ref|ZP_08581118.1| signal recognition particle protein [Fusobacterium sp. 21_1A]
gi|336162527|gb|EGN65491.1| signal recognition particle protein [Fusobacterium sp. 21_1A]
Length = 443
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 183/361 (50%), Positives = 254/361 (70%), Gaps = 11/361 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI
Sbjct: 86 LGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL +D+ +M+ELK
Sbjct: 146 QLQVLGQQIGVDVYSEENNKDVVGIATRAIEKAKEINATYMIVDTAGRLHVDETLMEELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K+ + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V
Sbjct: 206 ELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVV 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE++ D+E FYPDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S
Sbjct: 266 GKPIKFIGVGEKLNDIEIFYPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FD NDFLKQ +T+ R+GS+ ++ +IPGM KI + AEK ++ +EA+I++MT EER
Sbjct: 326 KFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMRKVEAIIQSMTKEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL------MGVM-EGGSL 353
+KP++L S R+ R+A+ SG V++L+ Q QM+ MK MG+M +GG
Sbjct: 384 KKPDILKAS--RKIRIAKGSGTEVSDVNKLLKQFDQMKSMMKMFSSGKMPMGLMGKGGKF 441
Query: 354 P 354
P
Sbjct: 442 P 442
>gi|28210935|ref|NP_781879.1| signal recognition particle, subunit ffh/srp54 [Clostridium tetani
E88]
gi|28203374|gb|AAO35816.1| signal recognition particle, subunit ffh/srp54 [Clostridium tetani
E88]
Length = 451
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 169/349 (48%), Positives = 252/349 (72%), Gaps = 2/349 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG + SE+ F ++PTVI+L GLQG GKTT++ KLA L+K+ K +LVA D+YRPAAI
Sbjct: 87 MGSKESEINFEANKPTVIMLVGLQGAGKTTMAGKLALQLRKKNKKPLLVACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G Q+ VPV+T G + P I+K ++ AK+ N++ +I+DTAGRL ID+ +MDELK
Sbjct: 147 QLQVVGSQIDVPVFTLGDKTNPVDISKAAIKHAKENNLNTIIIDTAGRLHIDENLMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P EVLLVVD+MTGQ+A + +FN ++ I+G ILTKLDGD+RGGAALS+K ++
Sbjct: 207 SIKENIEPNEVLLVVDSMTGQDAINVAESFNEKLNISGVILTKLDGDTRGGAALSIKAMT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE+M DLE FYP+RMA RILGMGDVLS +EKA++ + +++AE++ +IM+
Sbjct: 267 GKPIKFIGIGEKMNDLEVFYPERMASRILGMGDVLSLIEKAEQEIDKDEAEKIGSRIMNQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPE 298
F+ DFL + + ++G +++++ M+PG ++ + EK LK +E++I +MT +
Sbjct: 327 EFNLEDFLSAMQQMKKLGPLNKLVEMLPGANSKELKGIDFDKGEKDLKRIESIISSMTIK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
ER+ P L++ SP R+KR+A SG T QQV++++ MR MK + G+
Sbjct: 387 ERKNPSLVSGSPTRKKRIANGSGTTVQQVNKILKDFENMRKMMKQMNGI 435
>gi|340754117|ref|ZP_08690884.1| signal recognition particle protein [Fusobacterium sp. 2_1_31]
gi|358465943|ref|ZP_09175824.1| hypothetical protein HMPREF9093_00284 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|422317421|ref|ZP_16398777.1| signal recognition particle protein [Fusobacterium periodonticum
D10]
gi|229423656|gb|EEO38703.1| signal recognition particle protein [Fusobacterium sp. 2_1_31]
gi|357069550|gb|EHI79447.1| hypothetical protein HMPREF9093_00284 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|404589799|gb|EKA92378.1| signal recognition particle protein [Fusobacterium periodonticum
D10]
Length = 444
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 183/362 (50%), Positives = 254/362 (70%), Gaps = 12/362 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI
Sbjct: 86 LGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL +D+ +M+ELK
Sbjct: 146 QLQVLGQQIGVDVYSEEDNKDVVGIATRAIEKAKEINATYMIVDTAGRLHVDETLMNELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K+ + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V
Sbjct: 206 ELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVV 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S
Sbjct: 266 GKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FD NDFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++MT EER
Sbjct: 326 KFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQSMTIEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMGVMEGGS 352
+KP++L S R+ R+A+ SG V++L+ Q QM+ MK NL G+ +GG
Sbjct: 384 KKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNLGGMGKGGK 441
Query: 353 LP 354
P
Sbjct: 442 FP 443
>gi|299536774|ref|ZP_07050082.1| signal recognition particle-like (SRP) component [Lysinibacillus
fusiformis ZC1]
gi|424737018|ref|ZP_18165474.1| signal recognition particle-like (SRP) component [Lysinibacillus
fusiformis ZB2]
gi|298727786|gb|EFI68353.1| signal recognition particle-like (SRP) component [Lysinibacillus
fusiformis ZC1]
gi|422948850|gb|EKU43226.1| signal recognition particle-like (SRP) component [Lysinibacillus
fusiformis ZB2]
Length = 452
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 256/366 (69%), Gaps = 9/366 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S + F PTVI++ GLQG GKTT + KLAN L KK + +LVA DVYRPAA+
Sbjct: 87 MGGEQSPIKFNTKPPTVIMMVGLQGAGKTTTTGKLANVLRKKYNRKPLLVAADVYRPAAV 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV+ GTEV P +IA+Q +E AK+++ DVVI+DTAGRL ID+ +M EL
Sbjct: 147 QQLQTLGKQLSLPVFALGTEVSPVEIARQAIELAKEEHHDVVIIDTAGRLHIDEDLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
KD++ + P EV LVVDAMTGQ+A + +FN IGITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KDIRSLKEPDEVFLVVDAMTGQDAVNVAESFNEAIGITGVVLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG GE+M+ LEPF+P+RMA RILGMGDVLS +EKAQ + + A+E+++K S
Sbjct: 267 TQKPIKFVGMGEKMDALEPFHPERMASRILGMGDVLSLIEKAQANVDEAKAKELEEKFKS 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
F F+DF++Q + V +MG + ++ M+PG KI V+ +K + +EA+I +MTP
Sbjct: 327 QTFTFDDFVEQLQQVKKMGPLDEILKMLPGANKIKGLDNVKVDDKQMGRVEAIIYSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG-----SL 353
E+ PE++ S R+KR+A+ SG + Q+V++L+ Q +M+ MK + G+ G L
Sbjct: 387 EKTNPEIINGS--RKKRIAKGSGTSIQEVNRLIKQFDEMKKMMKQMTGMASGKGKKKMKL 444
Query: 354 PALSNL 359
P +L
Sbjct: 445 PGFDSL 450
>gi|392394728|ref|YP_006431330.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfitobacterium dehalogenans ATCC 51507]
gi|390525806|gb|AFM01537.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 453
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 179/344 (52%), Positives = 247/344 (71%), Gaps = 4/344 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S++ + PT+I+L GLQG GKTT AKLAN LKKQGK +LVA D+YRPAAI
Sbjct: 86 MGGVSSKINISSKPPTIIMLVGLQGAGKTTHGAKLANMLKKQGKHPLLVACDIYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ VPV++ G E P +IA L+ A + +DVVI+DTAGRL I++ +M EL+
Sbjct: 146 QLQVLGEQIKVPVFSLGQE-NPVEIAAASLQHANSQGLDVVIIDTAGRLHINEELMGELR 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K + P E+LLVVDAMTGQ+A + +F+ E+G+ G ILTKLDGD+RGGAALSVK V+
Sbjct: 205 DIKASVKPHEILLVVDAMTGQDAVNVAESFHNELGVDGIILTKLDGDTRGGAALSVKAVT 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK G GE+M+ +EPF+P+RMA RILGMGDVL+ +EKAQE ++ A EM++K+
Sbjct: 265 GCPIKFAGIGEKMDAIEPFFPERMASRILGMGDVLTLIEKAQEAFDEKQAREMEQKLRKQ 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F +DFL Q + + +MG ++ ++ MIPG+GK V+ EK + +EA+I +MTPEER
Sbjct: 325 EFTLDDFLDQMQQLKKMGPLNSLLEMIPGVGK-QMKDVQVDEKDMAHVEAIIHSMTPEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
KP L+ +S R++R+A+ SG + Q+V +L+ Q QM+ MK
Sbjct: 384 RKPALIKDS--RKRRIAKGSGTSVQEVGRLLKQFEQMQKMMKQF 425
>gi|334135560|ref|ZP_08509044.1| signal recognition particle protein [Paenibacillus sp. HGF7]
gi|333606896|gb|EGL18226.1| signal recognition particle protein [Paenibacillus sp. HGF7]
Length = 453
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 180/365 (49%), Positives = 256/365 (70%), Gaps = 3/365 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG ++L A PTVI++ GLQG GKTT S KLA L+KQ +LVA D+YRPAAI
Sbjct: 87 MGGTHTKLAKANKPPTVIMMVGLQGAGKTTTSGKLAKMLQKQNHKPLLVACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+Q+ VPV++ G +V P +IAK GL+ AK N D VIVDTAGRL ID+A+MDELK
Sbjct: 147 QLQVLGDQLKVPVFSMGDQVSPVEIAKNGLQFAKDNNNDYVIVDTAGRLHIDEALMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+V+ + P E LLVVDAMTGQ+A + +F+ ++ +TG +LTKLDGD+RGGAALSVK V+
Sbjct: 207 NVREAVGPHETLLVVDAMTGQDAVNVAESFHKQLELTGVVLTKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK GE+M+ LEPFYP+RMA RILGMGD+L+ +EKAQ + + A+EM++K+ +A
Sbjct: 267 GCPIKFAAMGEKMDALEPFYPERMASRILGMGDMLTLIEKAQAGIDADKAKEMERKMRNA 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEE 299
F F+DFL+Q V ++G + +++ M+PG GK+ + ++ +K + +EA++++MT EE
Sbjct: 327 EFTFDDFLEQMEQVKKLGPLDQLLDMLPGAGKMKGMKDLKVDDKQMGRVEAIVKSMTKEE 386
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 359
+ KPE++ + RRKR+A SG + Q V++L+ Q MR MK G+M ++ + L
Sbjct: 387 KRKPEIINAN--RRKRIALGSGNSVQDVNRLLKQFEDMRKMMKQFSGMMNPKAMKNMKKL 444
Query: 360 EDALK 364
K
Sbjct: 445 GKGFK 449
>gi|169827098|ref|YP_001697256.1| signal recognition particle-like (SRP) component [Lysinibacillus
sphaericus C3-41]
gi|168991586|gb|ACA39126.1| signal recognition particle-like (SRP) component [Lysinibacillus
sphaericus C3-41]
Length = 452
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 181/366 (49%), Positives = 258/366 (70%), Gaps = 9/366 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S + F PTVI++ GLQG GKTT + KLAN L KK + +LVA DVYRPAA+
Sbjct: 87 MGGEQSPIKFNTKPPTVIMMVGLQGAGKTTTTGKLANVLRKKYNRKPLLVAADVYRPAAV 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ GT++ P +IA+Q +E+AK+ + DVVI+DTAGRL ID+ +M EL
Sbjct: 147 QQLETLGKQLSLPVFSLGTDISPVKIARQAIEKAKEDHHDVVIIDTAGRLHIDEDLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
KD++ + P EV LVVDAMTGQ+A + +FN IGITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KDIRALKEPDEVFLVVDAMTGQDAVNVAESFNEAIGITGVVLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG GE+M+ LEPF+P+RMA RILGMGDVLS +EKAQ + + A+E+++K +
Sbjct: 267 TQKPIKFVGMGEKMDALEPFHPERMASRILGMGDVLSLIEKAQANVDEAKAKELEEKFKT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
+F F+DF++Q + V +MG + ++ M+PG KI V+ +K + +EA+I +MTP
Sbjct: 327 QSFTFDDFVEQLQQVKKMGPLDEILKMLPGANKIKGLDNVKVDDKQMGRVEAIIYSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG-----SL 353
E+ PEL+ S R+KR+A+ SG + Q+V++L+ Q +M+ MK + G+ G L
Sbjct: 387 EKTNPELINGS--RKKRIAKGSGTSIQEVNRLIKQFDEMKKMMKQMTGMASGKGKKKMKL 444
Query: 354 PALSNL 359
P +L
Sbjct: 445 PGFDSL 450
>gi|260437024|ref|ZP_05790840.1| signal recognition particle protein [Butyrivibrio crossotus DSM
2876]
gi|292810333|gb|EFF69538.1| signal recognition particle protein [Butyrivibrio crossotus DSM
2876]
Length = 448
Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 183/356 (51%), Positives = 253/356 (71%), Gaps = 12/356 (3%)
Query: 1 MGGEVSELVFAK-SRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAI 59
MG E +E+ F + PTVI++AGLQG GKTT +AK+A LK++GK +LVA DVYRPAAI
Sbjct: 87 MGSETTEISFVPGAAPTVIMMAGLQGAGKTTTTAKIAGKLKEKGKRPLLVACDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL I GE+ GVPV+ G KP IAK L A+K N +VVI+DTAGRL +D+ MM+EL
Sbjct: 147 KQLQINGEKQGVPVFEMGDNNKPVDIAKAALAHAQKNNNNVVILDTAGRLHVDEDMMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K++K +N + +LVVDAMTGQ+A + +TFN +IGI G +LTKLDGD+RGGAALS+K V
Sbjct: 207 KEIKEAVNVHQTILVVDAMTGQDAVNVASTFNEQIGIDGVVLTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPI +G GE++ DLE FYPDRMA RILGMGDVL+ +EK Q +E A+EM++K+
Sbjct: 267 TGKPILYIGMGEKLSDLEQFYPDRMASRILGMGDVLTLIEKVQADFDEEKAKEMERKLKK 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA-----EKSLKIMEAMIEA 294
+ FDFND+L+ + V ++G + +++ M+PGM +Q++ A EK + +EA+I +
Sbjct: 327 SEFDFNDYLESFKQVKKLGGIGKMLNMMPGMN----SQMKNAADNVDEKQIARVEAIIYS 382
Query: 295 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
MTP ER P+LL +P R+ R+A+ +G +V++LV Q QM+ MK L G+M G
Sbjct: 383 MTPAERANPKLL--NPSRKNRIARGAGVDIAEVNRLVKQQEQMKKMMKQLPGMMGG 436
>gi|312130725|ref|YP_003998065.1| signal recognition particle subunit ffh/srp54 (srp54)
[Leadbetterella byssophila DSM 17132]
gi|311907271|gb|ADQ17712.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Leadbetterella byssophila DSM 17132]
Length = 438
Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 178/351 (50%), Positives = 243/351 (69%), Gaps = 4/351 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG+ +E V K P V+L+AGLQG GKTT S K ANYLKKQGK MLVA DVYRPAAI
Sbjct: 86 MGGK-AETVNLKGSPAVVLIAGLQGSGKTTFSGKFANYLKKQGKQVMLVAADVYRPAAIT 144
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+GV VY IA+ + EAK K +VIVDTAGRL +D+ MM E++
Sbjct: 145 QLQVLGEQIGVDVYAEPENKDAVNIARNAVAEAKSKGKSIVIVDTAGRLAVDEVMMTEVE 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K+ ++P+E+L VVD+MTGQ+A FN + G +LTKLDGDSRGGAALS++ V
Sbjct: 205 NIKKAISPSEILFVVDSMTGQDAVNTAKAFNDRLDFDGVVLTKLDGDSRGGAALSIRAVV 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KP+K + GE+MEDL+ F+PDRMA RILGMGDV+S VE+AQ+ +++A ++ KK+
Sbjct: 265 DKPVKFMSTGEKMEDLDIFHPDRMASRILGMGDVISLVERAQQAFDEDEARKLNKKMREN 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
NFD NDFL Q + +MG++ V+GMIPGMG V + S K +E++I++MTP+ER
Sbjct: 325 NFDLNDFLGQLEQIKKMGNLKDVMGMIPGMGAAIK-DVDISNDSFKPIESIIKSMTPKER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 351
+P+++ S RRKR+A +G++ Q+V+ L+ Q QM+ MK + GG
Sbjct: 384 SQPDIIDGS--RRKRIATGAGRSIQEVNNLLKQFEQMKKMMKKFNAMTPGG 432
>gi|163790804|ref|ZP_02185229.1| signal recognition particle protein [Carnobacterium sp. AT7]
gi|159873872|gb|EDP67951.1| signal recognition particle protein [Carnobacterium sp. AT7]
Length = 437
Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 174/355 (49%), Positives = 255/355 (71%), Gaps = 8/355 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAI 59
MGGE + + A PTV+++ GLQG GKTT + KLA+YL+K Q K +LVA D+YRPAAI
Sbjct: 87 MGGEQATIQTAAKAPTVVMMVGLQGAGKTTTAGKLASYLRKNQNKRPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL +G+Q+ VPV++ G +V P +IA+QG+E+AK +++D V++DTAGRLQID+ +M EL
Sbjct: 147 QQLETIGKQLDVPVFSMGDQVSPVEIARQGIEKAKAEHLDFVLIDTAGRLQIDETLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
D+K PTE+ LVVDAMTGQEAA + +F+ ++ ITG ILTKLDGD+RGGAALS++ V
Sbjct: 207 SDIKETTQPTEIFLVVDAMTGQEAANVAASFDEQLDITGVILTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE+++ LEPFYPDRMA RILGMGD+L+ +EKAQ+ ++ +EEM K+
Sbjct: 267 TGKPIKFTGSGEKLDALEPFYPDRMANRILGMGDMLTLIEKAQQDFDEKKSEEMITKLRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE-KSLKIMEAMIEAMTPE 298
+FDFNDF++Q V+ MG + ++ MIPGM + + + K M+A++ +MTP+
Sbjct: 327 NSFDFNDFIEQMDQVSNMGPIEDILKMIPGMNNVPGLDKLQIDPKDTARMKAIVLSMTPQ 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 353
ERE P++L++S RR+R+A+ S + +V++++ Q + K +M M G++
Sbjct: 387 ERENPDILSQS--RRRRIARGSARPIAEVNRMIKQFNE----SKKMMSQMSKGNM 435
>gi|325105803|ref|YP_004275457.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pedobacter
saltans DSM 12145]
gi|324974651|gb|ADY53635.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pedobacter
saltans DSM 12145]
Length = 448
Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 180/345 (52%), Positives = 238/345 (68%), Gaps = 5/345 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAI 59
MGG V+EL K PT+IL+AGL G GKTT + KLAN+LK Q K +LVAGDVYRPAAI
Sbjct: 86 MGGSVTELDL-KQNPTIILIAGLNGAGKTTFTGKLANFLKTQKNKKPLLVAGDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +L QVG VYT P IA +G+ K+ +V+I+DTAGRL +D A+MDE+
Sbjct: 145 DQLEVLAGQVGAEVYTNRESKDPVAIALEGIAHGKQNGNNVIIIDTAGRLTLDDALMDEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+VK+ NP E+L VVDAMTGQ+A FN + TG +LTKLDGD+RGGAALS+K V
Sbjct: 205 AEVKKATNPQEILFVVDAMTGQDAVNTAKAFNDRLDFTGVVLTKLDGDTRGGAALSIKSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+M+ L+ FYPDRMA RILGMGDV+S VE+AQ+ ++ A E+QKKI
Sbjct: 265 VNKPIKFVGTGEKMDALDVFYPDRMASRILGMGDVVSLVERAQQQFDEKKAAELQKKIRK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + + +MG++ ++GMIPG+GK+ + + + K +EA+I +MTP E
Sbjct: 325 NKFDFNDFLGQIQQIKKMGNIKDLMGMIPGVGKMMK-NIEVDDNAFKGIEAIIHSMTPYE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
RE P+ + +P RR+R+A+ SG +V++L+ Q MR MK
Sbjct: 384 RENPDTI--NPSRRQRIAKGSGTDIAEVNKLIKQFEDMRKVMKQF 426
>gi|300772045|ref|ZP_07081915.1| signal recognition particle protein [Sphingobacterium spiritivorum
ATCC 33861]
gi|300760348|gb|EFK57174.1| signal recognition particle protein [Sphingobacterium spiritivorum
ATCC 33861]
Length = 445
Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 186/345 (53%), Positives = 242/345 (70%), Gaps = 5/345 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG V+EL +K+ PTVIL+AGL G GKTT S KLANYLK K+GK +LVAGDVYRPAAI
Sbjct: 86 MGGAVTELDTSKN-PTVILIAGLNGAGKTTFSGKLANYLKDKKGKKPLLVAGDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +LG QVGVPV+ P I++ G+EEAK+ +VVI+DTAGRL ID+A+M E+
Sbjct: 145 DQLEVLGGQVGVPVFVNRESNDPIAISQAGVEEAKRNGHNVVIIDTAGRLAIDEALMVEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK P E+L VVD+MTGQ+A FN + TG +LTKLDGD+RGGAALS+K V
Sbjct: 205 TAVKEATKPQEILFVVDSMTGQDAVNTAKAFNDRLDFTGVVLTKLDGDTRGGAALSIKSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+ME L+ FYPDRMA RILGMGDV+S VE+AQ+ ++ A E+QKKI
Sbjct: 265 VNKPIKFIGTGEKMEALDVFYPDRMASRILGMGDVVSLVERAQQQFDEKQAAELQKKIRK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDF Q + + +MG+M ++GMIPG+GK V + + K +EA+I++MTP E
Sbjct: 325 NKFDFNDFKSQIQQIKKMGNMKDLMGMIPGVGKAL-KDVEVDDNAFKPIEAIIDSMTPFE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
RE P+ + + RR R+A+ SG +V++L+ Q MR MK +
Sbjct: 384 RENPDAIDQK--RRIRIAKGSGTDINEVNKLMKQFGDMRKVMKQM 426
>gi|404329162|ref|ZP_10969610.1| signal recognition particle protein [Sporolactobacillus vineae DSM
21990 = SL153]
Length = 447
Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 176/348 (50%), Positives = 245/348 (70%), Gaps = 4/348 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAI 59
MGGE ++L FA PTVIL GLQG GKTT +AKLANY++K K +++A D+YRPAAI
Sbjct: 87 MGGEQTKLNFALKPPTVILFVGLQGAGKTTSAAKLANYIRKAHNKKPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG Q+ +PV++ G +V P I +QGLE+A+ + D+V++DTAGRL +D A+M+EL
Sbjct: 147 KQLQTLGRQLDIPVFSLGDQVNPVDIVRQGLEQAQTDHNDLVMIDTAGRLHVDDALMEEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K V +P E+ LVVDAMTGQ+A + FN + ITG I+TKLDGD+RGGAALS++ V
Sbjct: 207 EQIKSVSHPDEIFLVVDAMTGQDAVNVAGAFNDRLDITGVIMTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG GE+M+ LEPF+PDRMA RILGMGDVLS +EKAQ + +E A EM KK+ +
Sbjct: 267 TGKPIKFVGMGEKMDALEPFHPDRMASRILGMGDVLSLIEKAQNTVDEEKAREMAKKLQT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+F +DFL+Q + +MG + ++ M+PG K + ++ EK + +EAMI +MTP
Sbjct: 327 VSFTLDDFLEQIGQIRKMGPLQDLLAMMPGANKFKGMKNMQIDEKKIDQVEAMIRSMTPL 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
E+ P+++ S RRKR+A SG + V++L+ Q M+ MK MG
Sbjct: 387 EKNDPDIINAS--RRKRIALGSGTSIADVNRLLKQFKDMKKMMKQFMG 432
>gi|332667956|ref|YP_004450744.1| signal recognition particle protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332336770|gb|AEE53871.1| signal recognition particle protein [Haliscomenobacter hydrossis
DSM 1100]
Length = 450
Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 184/345 (53%), Positives = 237/345 (68%), Gaps = 5/345 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGK-SCMLVAGDVYRPAAI 59
MGG+ + L A +PTVIL+AGLQG GKTT S KLA++LK Q K S +LVA DVYRPAA+
Sbjct: 87 MGGQAAGLNLA-GKPTVILIAGLQGSGKTTFSGKLAHWLKTQKKKSPLLVACDVYRPAAM 145
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +L EQVGVPVY P QIA + ++ A + DVVIVDTAGRL ID+ MM E+
Sbjct: 146 DQLTVLAEQVGVPVYKEPESKNPVQIALKAIQYAIEHKCDVVIVDTAGRLAIDEEMMAEI 205
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K++K + P E L VVDAMTGQ+A FN I G +LTK+DGD+RGGAALSVK
Sbjct: 206 KNIKEAILPQETLFVVDAMTGQDAVNTAQVFNETINFDGVVLTKMDGDTRGGAALSVKYT 265
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
GKPIK GE+M+ LE FYPDRMA RILGMGD++SFVEKAQE +E A++++KKI
Sbjct: 266 VGKPIKFASTGEKMDALELFYPDRMAQRILGMGDIVSFVEKAQEQFDEELAKKLEKKIQK 325
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDF+ Q + +MG + ++GMIPGM K+T V + K +EA+I++MTP+E
Sbjct: 326 NKFDFNDFMAQINQIKKMGDLKSIMGMIPGMDKLT-RNVEIDNNAFKKVEAIIQSMTPKE 384
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
R P+LL S R++R+A+ G+T V+ + Q QMR M N+
Sbjct: 385 RTNPDLLNMS--RKQRIAKGCGRTLNDVNMFIKQFEQMRKMMHNM 427
>gi|296133550|ref|YP_003640797.1| signal recognition particle protein [Thermincola potens JR]
gi|296032128|gb|ADG82896.1| signal recognition particle protein [Thermincola potens JR]
Length = 450
Score = 351 bits (900), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 172/337 (51%), Positives = 242/337 (71%), Gaps = 3/337 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S++ + PTV++L GLQG GKTT KL N L+KQG+ +LVA DVYRPAAI
Sbjct: 87 MGGTQSKITVSSKPPTVVMLVGLQGAGKTTTVGKLGNQLRKQGRRPLLVAADVYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ +PV++ G + P IAK +E AK D+V++DTAGRL I++ +M+ELK
Sbjct: 147 QLKVLGEQLNIPVFSLGDKTNPVDIAKAAVEHAKSYGNDMVLIDTAGRLHINEELMEELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + P E+L V+DA TGQ+A + TF+ ++GI G I+TKLDGD+RGGAALSVK V+
Sbjct: 207 NIKESVKPHEILFVMDATTGQDAVNVAKTFDEQLGIDGVIITKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GE+++ LEPF+PDRMA RILGMGDVLS +EKAQ + A E+Q+KI S
Sbjct: 267 GKPIKFVGMGEKLDALEPFFPDRMASRILGMGDVLSLIEKAQSTLDANKARELQQKIKSQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEE 299
+++ DFL+Q R V +MG + +++GM+PGMG + + V+ EK + +EA+I++MTPEE
Sbjct: 327 DYNLEDFLEQMRQVRKMGPLDQILGMLPGMGNLKQLKDVQVDEKEMLHIEAIIQSMTPEE 386
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 336
R P ++ +S R+KR+A+ SG V++L+ Q Q
Sbjct: 387 RRNPSIIKDS--RKKRIAKGSGTKVSDVNKLLKQFDQ 421
>gi|260495487|ref|ZP_05815613.1| signal recognition particle protein [Fusobacterium sp. 3_1_33]
gi|260197024|gb|EEW94545.1| signal recognition particle protein [Fusobacterium sp. 3_1_33]
Length = 443
Score = 351 bits (900), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 183/361 (50%), Positives = 254/361 (70%), Gaps = 11/361 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI
Sbjct: 86 LGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL +D+ +M+ELK
Sbjct: 146 QLQVLGQQIGVDVYSEENSKDVVGIATRAIEKAKEINATYMIVDTAGRLHVDETLMEELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K+ + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V
Sbjct: 206 ELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVV 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S
Sbjct: 266 GKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FD NDFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++MT EER
Sbjct: 326 KFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQSMTKEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL------MGVM-EGGSL 353
+KP++L S R+ R+A+ SG V++L+ Q QM+ MK MG+M +GG
Sbjct: 384 KKPDILKAS--RKIRIAKGSGTEVSDVNKLLKQFDQMKSMMKMFSSGKMPMGLMGKGGKF 441
Query: 354 P 354
P
Sbjct: 442 P 442
>gi|389573280|ref|ZP_10163355.1| signal recognition particle protein Ffh [Bacillus sp. M 2-6]
gi|388426977|gb|EIL84787.1| signal recognition particle protein Ffh [Bacillus sp. M 2-6]
Length = 447
Score = 351 bits (900), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 175/346 (50%), Positives = 255/346 (73%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ AK PTVI++ GLQG GKTT + KLAN L KK + M+VA D+YRPAAI
Sbjct: 87 MGGEESKIAVAKKSPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMMVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D VI+DTAGRL ID+ +MDEL
Sbjct: 147 QQLQTLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEEHHDYVILDTAGRLHIDEDLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ VK V NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V
Sbjct: 207 QKVKEVANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK GE+++ +EPF+P+RMA RILGMGDVL+ +EKAQ + Q+ A+E+++K+ +
Sbjct: 267 TNTPIKFAALGEKLDAIEPFHPERMASRILGMGDVLTLIEKAQANVDQDKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+F +DFL+Q V MG + +I M+PG GK+ + V+ EK L +EA+I++MT E
Sbjct: 327 MSFTLDDFLEQLGQVRNMGPLDELIQMMPGAGKMKGLKNVQVDEKQLNHIEAIIKSMTTE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E+E+PE++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK +
Sbjct: 387 EKEQPEVINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQM 430
>gi|421527575|ref|ZP_15974173.1| signal recognition particle protein [Fusobacterium nucleatum ChDC
F128]
gi|402256254|gb|EJU06738.1| signal recognition particle protein [Fusobacterium nucleatum ChDC
F128]
Length = 444
Score = 351 bits (900), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 184/362 (50%), Positives = 254/362 (70%), Gaps = 12/362 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI
Sbjct: 86 LGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL +D+ +M+ELK
Sbjct: 146 QLQVLGKQIGVDVYSEEDNKDVVGIATRAIEKAKEINATYMIVDTAGRLHVDETLMEELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K+V+ P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V
Sbjct: 206 ELKKVIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVV 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S
Sbjct: 266 GKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FD NDFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++MT EER
Sbjct: 326 KFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQSMTKEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL-------MGVM-EGGS 352
+KP++L S R+ R+A+ SG V++L+ Q QM+ MK MG M +GG
Sbjct: 384 KKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNMGAMGKGGK 441
Query: 353 LP 354
P
Sbjct: 442 FP 443
>gi|408356888|ref|YP_006845419.1| signal recognition particle protein [Amphibacillus xylanus NBRC
15112]
gi|407727659|dbj|BAM47657.1| signal recognition particle protein [Amphibacillus xylanus NBRC
15112]
Length = 450
Score = 351 bits (900), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 173/349 (49%), Positives = 253/349 (72%), Gaps = 4/349 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT + KLAN L KK + +LVA DVYRPAA+
Sbjct: 87 MGGEQSKIAVADRPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPLLVAADVYRPAAV 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ +PV+ GT+ P +IA + ++ AK++++D VI+DTAGRL ID +MDEL
Sbjct: 147 DQLKTVGKQLNIPVFEKGTDANPVEIANEAIQYAKEEHLDYVIIDTAGRLHIDTDLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K+ L+P E+ LVVD+MTGQ+A + FN ++ ITG ILTKLDGD+RGGAALS+K V
Sbjct: 207 YQIKQNLSPDEIFLVVDSMTGQDAVNVAENFNEQLDITGVILTKLDGDTRGGAALSIKSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK +G GE+++ LE F+PDRMA RILGMGDVLS +EKA+ + ++ A+E++ K+ S
Sbjct: 267 TNKPIKFIGMGEKLDQLEDFHPDRMASRILGMGDVLSLIEKAEATIDEKKAKELEDKMRS 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
A+FDF+DFL+Q V MG + ++ ++PG K+ + V+ +K L +EA+I++MT +
Sbjct: 327 ASFDFDDFLEQMEQVRSMGPLDELLSLLPGANKMKGLKNVQLDDKQLVHVEAIIKSMTKQ 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
ER+ P L+ +P R+KR+AQ SG+ +V++L+ Q +MR MK + G+
Sbjct: 387 ERKDPSLM--NPSRKKRIAQGSGRPIAEVNRLIKQFNEMRKMMKQMSGM 433
>gi|304404220|ref|ZP_07385882.1| signal recognition particle protein [Paenibacillus curdlanolyticus
YK9]
gi|304347198|gb|EFM13030.1| signal recognition particle protein [Paenibacillus curdlanolyticus
YK9]
Length = 449
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 178/349 (51%), Positives = 247/349 (70%), Gaps = 3/349 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG +++ A PTVIL+AGLQG GKTT +AKLA L K +L+AGD+YRPAAI
Sbjct: 75 MGGSATQIAKASKPPTVILMAGLQGAGKTTTTAKLAKMLMKNNHKPLLIAGDIYRPAAIK 134
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+G V+T G +V P +IA+QGL+ AK + D VIVDTAGRLQID+A+MDE+K
Sbjct: 135 QLQVLGEQIGAQVFTLGNDVSPVEIARQGLQHAKANSFDYVIVDTAGRLQIDEALMDEIK 194
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+ V+ P EVLLVVDAMTGQEA + +F+ ++ +TG +LTKLDGD+RGGAALSVK V+
Sbjct: 195 QIHAVVEPDEVLLVVDAMTGQEAVNVAQSFHEQLELTGVVLTKLDGDTRGGAALSVKAVT 254
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK V GE++E LE F+P+RMA RILGMGD+LS +EKAQ + + A EM++K+ +A
Sbjct: 255 GCPIKFVATGEKIEPLEAFHPERMASRILGMGDMLSLIEKAQSNIDADKAAEMERKMRNA 314
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEE 299
F F DFL Q V ++G + +++ M+PGM K+ + ++ +K + +EA++ +MT +E
Sbjct: 315 EFTFEDFLDQMEQVRKLGPLDQLLDMLPGMNKVKGLKDMKVDDKQIGRVEAIVRSMTTDE 374
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 348
+ P+LL S RR+R+A SG V++L+ Q +MR MK G+M
Sbjct: 375 KRNPDLLNYS--RRRRIAAGSGTQIADVNRLIKQFDEMRKMMKQFSGMM 421
>gi|302872185|ref|YP_003840821.1| signal recognition particle protein [Caldicellulosiruptor
obsidiansis OB47]
gi|302575044|gb|ADL42835.1| signal recognition particle protein [Caldicellulosiruptor
obsidiansis OB47]
Length = 443
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 178/344 (51%), Positives = 240/344 (69%), Gaps = 2/344 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG ++L F+ S ++ ++ GLQG GKTT + KLA LKKQGK+ LVA D+YRPAAI
Sbjct: 86 LGGSDTKLTFSPSGFSIYMMVGLQGSGKTTTAGKLAGLLKKQGKNPSLVACDIYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++ ++VGV Y T +IAK G+E AK DVVI+DTAGRL I++ +MDELK
Sbjct: 146 QLEVVAQKVGVKCYADYTSQDAVKIAKDGIEFAKSNRSDVVIIDTAGRLHINQELMDELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + PTE+LLVVDAMTGQ+A + FN ++GI G I+TKLDGD+RGGAALSVK ++
Sbjct: 206 NIKNAVKPTEILLVVDAMTGQDAVNVAEAFNDQLGIDGIIMTKLDGDTRGGAALSVKAIT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK G GE+MEDLE F+PDRMA RILGMGDVL+ +EKAQE + Q+ AEE++KK+ S
Sbjct: 266 GKPIKFAGVGEKMEDLEVFHPDRMASRILGMGDVLTLIEKAQEAIDQKKAEELEKKLRSM 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F DFL Q + + +MG +S++I MIPG+ EK LK +EA+I +MT EER
Sbjct: 326 QFTLEDFLDQLKQIKKMGPLSQIISMIPGIKLKGDVDFDAGEKELKKIEAIINSMTKEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+ P ++ S R++R+A SG T Q V++L+ Q M+ MK
Sbjct: 386 QDPSIINSS--RKRRIAMGSGTTVQDVNRLLKQFEDMKRMMKQF 427
>gi|19704725|ref|NP_604287.1| Signal recognition particle, subunit FFH/SRP54 [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|296328503|ref|ZP_06871023.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|19715045|gb|AAL95586.1| Signal recognition particle, subunit FFH/SRP54 [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|296154409|gb|EFG95207.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 444
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 180/356 (50%), Positives = 252/356 (70%), Gaps = 8/356 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI
Sbjct: 86 LGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL +D+ +MDELK
Sbjct: 146 QLQVLGQQIGVDVYSEEDNKDVVGIATRAIEKAKEINATYMIVDTAGRLHVDETLMDELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K+ + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V
Sbjct: 206 ELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVV 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S
Sbjct: 266 GKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FD NDFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++MT EER
Sbjct: 326 KFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQSMTKEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 356
+KP++L S R+ R+A+ SG V++L+ Q Q MK++M + G +P +
Sbjct: 384 KKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFDQ----MKSMMKMFSSGKMPNI 433
>gi|381183946|ref|ZP_09892631.1| signal recognition particle protein [Listeriaceae bacterium TTU
M1-001]
gi|380316157|gb|EIA19591.1| signal recognition particle protein [Listeriaceae bacterium TTU
M1-001]
Length = 452
Score = 350 bits (899), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 177/346 (51%), Positives = 255/346 (73%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ ++ PTVI++ GLQG GKTT + KLAN L KKQ + +LVA D+YRPAAI
Sbjct: 87 MGGEESKIAVSEKPPTVIMMVGLQGAGKTTTTGKLANLLRKKQNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ +E+AK++++D VI+DTAGRL ID+ +M EL
Sbjct: 147 KQLETLGKQLNIPVFSLGDQVSPVEIAKQAIEKAKEEHLDYVIIDTAGRLHIDEELMGEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K+VK V NP E+LLVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KEVKEVTNPAEILLVVDSMTGQDAVNVAESFNEQLGVTGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + QE EM++K+
Sbjct: 267 TGKPIKFVGMGEKMEALETFHPDRMASRILGMGDVLSLIEKAQVDVDQEKMREMERKMKE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
+ +DFL+Q V +MG + ++ M+PG GK+ ++ +K L +EA+I++MT
Sbjct: 327 NSMTLDDFLEQLGQVKQMGPLDELLKMLPGAGKMKGLDNMQVDDKQLGHIEAIIKSMTKN 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E++ P+++ S RRKR+A+ SG+ Q+V++L+ Q +M+ MK +
Sbjct: 387 EKDNPDIINAS--RRKRIARGSGRPIQEVNRLLKQFNEMKKMMKQM 430
>gi|375090633|ref|ZP_09736947.1| signal recognition particle protein [Facklamia languida CCUG 37842]
gi|374565394|gb|EHR36665.1| signal recognition particle protein [Facklamia languida CCUG 37842]
Length = 490
Score = 350 bits (899), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 176/368 (47%), Positives = 254/368 (69%), Gaps = 8/368 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQG-KSCMLVAGDVYRPAAI 59
MGGE L A PTVI++AGLQG GKTT KLANYLK+QG K +LVAGDVYRPAAI
Sbjct: 87 MGGEQVPLNLATQPPTVIMMAGLQGAGKTTTVGKLANYLKEQGLKRPLLVAGDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G Q+ V++ GT+V P +IA+Q LE A+ + DVV++DTAGRL +++ +M+EL
Sbjct: 147 DQLETIGRQLNFEVFSQGTDVSPVEIARQALERARIQGNDVVLIDTAGRLHVNEELMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K ++P E+LL VDAMTGQ+A + FN + ITG I+TKLDGD+RGGAALS++ +
Sbjct: 207 KQIKAAVHPDEILLTVDAMTGQDAVNVAQAFNDALDITGVIITKLDGDTRGGAALSIRSI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK G+GE++ LEPF+PDRM+ RILGMGD+++ +EKAQ+ +E+A +M KI
Sbjct: 267 IDKPIKFTGQGEQLNALEPFHPDRMSSRILGMGDMMTLIEKAQQDFDEEEAAKMADKIKD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
A+FDFNDF+ Q V +MG + +I MIPG+ K+ Q +K + + A++++MTP
Sbjct: 327 ASFDFNDFIDQMDQVRKMGPLKDLIKMIPGINKVPGIQDFNIDDKDMNRIRAVVQSMTPY 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSN 358
ER P+ +++S RR+R+A G+T +V+QL+ Q Q R N+M M G + ++
Sbjct: 387 ERTHPDEISQS--RRRRIASGCGQTLNEVNQLIKQFNQSR----NMMAQMSNGKMSGMNK 440
Query: 359 LEDALKSE 366
+ + ++ +
Sbjct: 441 MMNQMQQQ 448
>gi|326803882|ref|YP_004321700.1| signal recognition particle protein [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650579|gb|AEA00762.1| signal recognition particle protein [Aerococcus urinae
ACS-120-V-Col10a]
Length = 491
Score = 350 bits (899), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 172/361 (47%), Positives = 253/361 (70%), Gaps = 8/361 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAI 59
+GGE + + ++ PT+I++AGLQG GKTT KLAN+L+++ + +LVA DVYRPAAI
Sbjct: 87 LGGEQVGINYNEAGPTIIMMAGLQGAGKTTTVGKLANHLREEDHRKPLLVAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G Q+ +PV+ G +V P IA++ + AK+ N D + +DTAGRLQID+ +MDEL
Sbjct: 147 DQLETIGRQLDLPVFQLGNQVSPVDIAQKAVAYAKENNYDTIFIDTAGRLQIDQTLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K+++ ++P E+LL VDAM+GQEAA + TF+ E+ +TG +LTKLDGD+RGGAALS+ +
Sbjct: 207 KNIQAAVHPDEILLTVDAMSGQEAANVAKTFDEELELTGVVLTKLDGDTRGGAALSIASI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ED+E FYPDRM+ RILGMGD+++ +EKAQ+ +++AEEM K+ +
Sbjct: 267 TGKPIKFTGVGEKLEDIETFYPDRMSNRILGMGDMMTLIEKAQKEFDEKEAEEMAAKMQA 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE-KSLKIMEAMIEAMTPE 298
+DFNDF+KQ + +MGS +I MIPG+ KI P + K + +A+I++MT
Sbjct: 327 NTYDFNDFVKQMDQMNKMGSFESIIKMIPGLNKILPVDKLNIDPKDMVRTKAIIQSMTDY 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSN 358
ER P+ + +S RR+R+A+ S T QV+QL+ Q Q R +M M G + +LS+
Sbjct: 387 ERTHPDEINQS--RRRRIAKGSATTVNQVNQLIKQFNQSRT----MMSAMTNGDMSSLSS 440
Query: 359 L 359
L
Sbjct: 441 L 441
>gi|339448384|ref|ZP_08651940.1| signal recognition particle protein [Lactobacillus fructivorans
KCTC 3543]
Length = 481
Score = 350 bits (898), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 181/362 (50%), Positives = 251/362 (69%), Gaps = 10/362 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG + LV + PTVI++ GLQG GKTT + KLA LK + +++A DVYRPAAI
Sbjct: 87 MGKSATPLVKSDKIPTVIMMVGLQGAGKTTSAGKLAKKLKTDDHARPLMIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +GEQVGVPV+ GT+V P QI + GL+EA K N D V++DTAGRLQID+ +MDEL
Sbjct: 147 EQLEKVGEQVGVPVFQEGTDVDPVQIVQDGLKEADKNNNDYVLIDTAGRLQIDENLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K++K+V NP ++LLVVDAMTGQ A FN + ITG ILTKLDGD+RGGAALS++ V
Sbjct: 207 KNIKKVANPNDILLVVDAMTGQNAVDTAVGFNDALDITGVILTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPI VG+GE+++DL+ F+PDRMA RILGMGD+LSF+EK Q+ + A+E+ +KI
Sbjct: 267 TDKPIMFVGQGEKLDDLDVFHPDRMASRILGMGDMLSFIEKTQKEYDENQAKELTEKIKE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
+FDF+DF+ Q + +MG + ++ MIPGM PA + K L ++A+I +MT
Sbjct: 327 NSFDFDDFIDQLEQIQKMGPIQDLVKMIPGMAN-NPALKNLNVNPKDLDHIKAIIYSMTS 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
EER P++L +P RR+R+A+ S + QQV++L+ Q Q MK +M + G++ LS
Sbjct: 386 EERSNPDVL--NPSRRRRIARGSAQPIQQVNRLIKQFDQ----MKKMMNKVSNGNMSGLS 439
Query: 358 NL 359
N+
Sbjct: 440 NM 441
>gi|289764649|ref|ZP_06524027.1| signal recognition particle [Fusobacterium sp. D11]
gi|289716204|gb|EFD80216.1| signal recognition particle [Fusobacterium sp. D11]
Length = 444
Score = 350 bits (898), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 183/362 (50%), Positives = 253/362 (69%), Gaps = 12/362 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI
Sbjct: 86 LGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL +D+ +M+ELK
Sbjct: 146 QLQVLGQQIGVDVYSEENSKDVVGIATRAIEKAKEINATYMIVDTAGRLHVDETLMEELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K+ + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V
Sbjct: 206 ELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVV 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S
Sbjct: 266 GKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FD NDFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++MT EER
Sbjct: 326 KFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQSMTKEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL-------MGVM-EGGS 352
+KP++L S R+ R+A+ SG V++L+ Q QM+ MK MG M +GG
Sbjct: 384 KKPDILKAS--RKIRIAKGSGTEVSDVNKLLKQFDQMKSMMKMFSSGKMPNMGAMGKGGK 441
Query: 353 LP 354
P
Sbjct: 442 FP 443
>gi|336113783|ref|YP_004568550.1| signal recognition particle protein [Bacillus coagulans 2-6]
gi|335367213|gb|AEH53164.1| signal recognition particle protein [Bacillus coagulans 2-6]
Length = 447
Score = 350 bits (898), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 175/353 (49%), Positives = 258/353 (73%), Gaps = 4/353 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGG S++ AK PTVI++ GLQG GKTT S KLAN L KK ++ +LVA D+YRPAAI
Sbjct: 87 MGGSQSKIAVAKRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRTPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+G+PV++ G ++ P +IA+Q +E+AK+++ D VI+DTAGRL ID +M+EL
Sbjct: 147 KQLETLGKQLGMPVFSLGDKISPVEIARQAIEKAKEEHHDTVIIDTAGRLHIDSELMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K++K + +P E+ LVVDAMTGQ+A + +FN ++GITG ILTKLDGD+RGGAALS++ V
Sbjct: 207 KEIKELAHPDEIFLVVDAMTGQDAVNVAQSFNDQLGITGVILTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK G GE+M+ LEPF+P+RMA RILGMGD+LS +EKAQE + +E A ++KK+
Sbjct: 267 TEKPIKFAGMGEKMDALEPFHPERMASRILGMGDILSLIEKAQETVDEEKARALEKKMRD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
+F F DFL+Q V +MG + ++ MIPG ++ ++ EK + +EA+I++MT +
Sbjct: 327 QSFTFEDFLEQLGQVRKMGPLGDILKMIPGANRMKGMDNLQIDEKQIAHVEAIIQSMTKQ 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 351
E+ +P+++ S R+KR+A+ SG+ Q+V++L+ Q +M+ MK L G+ + G
Sbjct: 387 EKIRPDIINAS--RKKRIAKGSGRPVQEVNRLLKQFEEMKKMMKQLQGMNQKG 437
>gi|366162322|ref|ZP_09462077.1| signal recognition particle protein [Acetivibrio cellulolyticus
CD2]
Length = 450
Score = 350 bits (898), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 176/333 (52%), Positives = 240/333 (72%), Gaps = 4/333 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S++VFA PTV ++ GLQG GKTT S KLAN L+KQGK+ +LVA DVYRPAAI
Sbjct: 87 MGPGQSKVVFAPKPPTVYMMVGLQGSGKTTTSGKLANLLRKQGKNPLLVACDVYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G Q+GV V++ G + P IAK +E AK K D+VI+DTAGRL ID+ +MDELK
Sbjct: 147 QLQVVGGQLGVDVFSMGDQTNPVDIAKAAVEHAKIKQYDLVIIDTAGRLHIDEKLMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + P E+LLVVD+MTGQ+A + TFN ++G+ G ILTKLDGD+RGGAALSVK V+
Sbjct: 207 NIKDTVRPHEILLVVDSMTGQDAVNVSETFNEKLGVDGVILTKLDGDTRGGAALSVKTVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE++ DLEPF+PDRMA RILGMGDVLS +EKAQE ++ A EM++K+ +
Sbjct: 267 GKPIKFIGMGEKLSDLEPFFPDRMASRILGMGDVLSLIEKAQEAFDEKAALEMERKMRTQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA--EKSLKIMEAMIEAMTPE 298
F DFL Q + + +MG +++++GM+PG+ ++ A +K L EA+I +MT +
Sbjct: 327 QFTLEDFLDQMQQIKKMGPLNKIVGMLPGVNADALKEINSADSDKELGRFEAIIRSMTKK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 331
ER P ++ S RRKR+A SG T Q V++++
Sbjct: 387 ERNDPSIINGS--RRKRIAAGSGTTVQDVNKVL 417
>gi|259046590|ref|ZP_05736991.1| signal recognition particle protein [Granulicatella adiacens ATCC
49175]
gi|259036755|gb|EEW38010.1| signal recognition particle protein [Granulicatella adiacens ATCC
49175]
Length = 478
Score = 350 bits (897), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 175/358 (48%), Positives = 251/358 (70%), Gaps = 8/358 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + F PTV+++ GLQG GKTT + KLA+++ K + K +LVA DVYRPAAI
Sbjct: 87 MGGEQAPFRFEAKPPTVVMMVGLQGAGKTTTAGKLASFMAKHEKKRPLLVAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ PV++ G +V P +IAKQ +E+AK D+VI+DTAGRL ID+ +M+EL
Sbjct: 147 DQLQTLGKQLNFPVFSLGNQVSPVEIAKQAIEKAKIDGRDLVIIDTAGRLHIDETLMEEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+++K V NP+E+LLVVD+MTGQ+A + TFN + ITG ILTKLDGD+RGGAALS++ V
Sbjct: 207 QNIKAVANPSEILLVVDSMTGQDAVNVAQTFNERLDITGVILTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK GRGE++ED E FYP+RMA RILGMGD+++ +EKAQ+ + A+EM KI +
Sbjct: 267 TGKPIKFTGRGEKLEDFEIFYPERMASRILGMGDMMTLIEKAQQDFDEAKAQEMADKIKA 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
FDFNDF+ Q V +MG + ++ MIPG+ K+ ++ K M+A++ +MTP+
Sbjct: 327 NTFDFNDFIDQLDQVNKMGPLEDILKMIPGLNKMAGLNDLKVDPKDTARMKAIVLSMTPQ 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 356
ERE P++L+++ RRKR+A S + +V++L+ Q + K +M M G++ L
Sbjct: 387 ERENPDILSQA--RRKRIAAGSARPLAEVNRLIKQFNE----SKKMMNQMSNGNMKGL 438
>gi|311030155|ref|ZP_07708245.1| signal recognition particle protein [Bacillus sp. m3-13]
Length = 448
Score = 350 bits (897), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 172/346 (49%), Positives = 254/346 (73%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ + PTVI++ GLQG GKTT + KLAN L KK + +LVA D+YRPAAI
Sbjct: 87 MGGEQSKIAVSSRPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ +++AK ++ D V++DTAGRL +D+ +MDEL
Sbjct: 147 KQLETLGKQLSMPVFSLGDQVSPVEIAKQAIQKAKDEHHDYVLIDTAGRLHVDENLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K VK + NP E+ LVVDAMTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALSVK V
Sbjct: 207 KQVKEISNPDEIFLVVDAMTGQDAVNVAQSFNEQLGLTGVVLTKLDGDTRGGAALSVKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK +G GE+++ +EPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TNTPIKYIGMGEKLDAIEPFHPERMASRILGMGDVLTLIEKAQSNVDEEKAKELEQKLRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
NF F+DFL+Q V MG + ++GMIPG K+ + V+ EK + +EA+I++MT
Sbjct: 327 MNFTFDDFLEQLGQVRNMGPLDEILGMIPGANKMKGLKNVQVDEKQIGHVEAIIQSMTKA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E++ P+L+ S R+KR+A+ SG+ Q+V++L+ Q +M+ MK +
Sbjct: 387 EKDNPDLINAS--RKKRIAKGSGRPIQEVNRLLKQFEEMKKMMKQM 430
>gi|345859708|ref|ZP_08812042.1| signal recognition particle protein [Desulfosporosinus sp. OT]
gi|344327165|gb|EGW38609.1| signal recognition particle protein [Desulfosporosinus sp. OT]
Length = 451
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 181/344 (52%), Positives = 244/344 (70%), Gaps = 4/344 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG ++ A PTVILL GLQG GKTT +AKLAN LKKQGK +LVA DVYRPAAI
Sbjct: 86 MGGATGKIPIASKPPTVILLLGLQGAGKTTHAAKLANMLKKQGKHPLLVACDVYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQV VPV++ G +V P +IA+ ++ A DVVI+DTAGRL I++ +M EL+
Sbjct: 146 QLEVLGEQVKVPVFSMG-QVSPVEIARASIKHANSNGQDVVIIDTAGRLHINEELMTELR 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K + P E+LLVVDAMTGQ+A + +F+ ++G+ G ILTKLDGD+RGGAALS+K V+
Sbjct: 205 DIKNAVKPHEILLVVDAMTGQDAVNVAESFHKDLGLDGVILTKLDGDTRGGAALSIKAVT 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G IK G GE+M+ +EPF+PDRMA RILGMGDVL+ +EKAQE ++ A+EM++K+
Sbjct: 265 GCTIKFAGIGEKMDAIEPFHPDRMASRILGMGDVLTLIEKAQESFDEKKAKEMEQKLRKQ 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F DFL Q + + +MG +S ++ MIPG+GK V+ EK +EA+I +MTPEER
Sbjct: 325 EFTLEDFLDQMQQMKKMGPLSSILEMIPGVGK-QLKDVQIDEKDTAHLEAIIRSMTPEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
KP ++ +S R+KR+A+ SG + Q V +L+ Q QM+ MK
Sbjct: 384 RKPSVIKDS--RKKRIAKGSGTSVQDVGRLLKQFEQMQKMMKQF 425
>gi|194014310|ref|ZP_03052927.1| signal recognition particle protein [Bacillus pumilus ATCC 7061]
gi|194013336|gb|EDW22901.1| signal recognition particle protein [Bacillus pumilus ATCC 7061]
Length = 446
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 175/352 (49%), Positives = 258/352 (73%), Gaps = 4/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ AK PTVI++ GLQG GKTT + KLAN L KK + M+VA D+YRPAAI
Sbjct: 87 MGGEESKIAVAKKSPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRQPMMVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D VI+DTAGRL ID+ +MDEL
Sbjct: 147 QQLQTLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEEHHDYVILDTAGRLHIDEELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ VK V +P E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V
Sbjct: 207 QKVKEVASPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK GE+++ +EPF+P+RMA RILGMGDVL+ +EKAQ + Q+ A+E+++K+ +
Sbjct: 267 TNTPIKFAALGEKLDAIEPFHPERMASRILGMGDVLTLIEKAQANVDQDKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+F +DFL+Q V MG + +I M+PG GK+ + V+ EK L +EA+I++MT E
Sbjct: 327 MSFTLDDFLEQLGQVRNMGPLDELIQMMPGAGKMKGLKNVQVDEKQLNHIEAIIKSMTTE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
E+E+PE++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 387 EKEQPEVINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|423138302|ref|ZP_17125945.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
animalis F0419]
gi|371958340|gb|EHO76059.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
animalis F0419]
Length = 443
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 182/361 (50%), Positives = 254/361 (70%), Gaps = 11/361 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI
Sbjct: 86 LGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL +D+ +M+ELK
Sbjct: 146 QLQVLGQQIGVDVYSEENSKDVVGIATRAIEKAKEINATYMIVDTAGRLHVDETLMEELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K+ + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V
Sbjct: 206 ELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVV 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S
Sbjct: 266 GKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FD NDFLKQ +T+ R+GS+ ++ +IPG+ KI + AEK +K +EA+I++MT EER
Sbjct: 326 KFDLNDFLKQLQTIKRLGSLGGILKLIPGIPKID--DLAPAEKEMKKVEAIIQSMTKEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL------MGVM-EGGSL 353
+KP++L S R+ R+A+ SG V++L+ Q QM+ MK MG+M +GG
Sbjct: 384 KKPDILKAS--RKIRIAKGSGTEVSDVNKLLKQFDQMKSMMKMFSSGKMPMGLMGKGGKF 441
Query: 354 P 354
P
Sbjct: 442 P 442
>gi|422340385|ref|ZP_16421333.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
polymorphum F0401]
gi|355369069|gb|EHG16473.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
polymorphum F0401]
Length = 444
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 183/362 (50%), Positives = 253/362 (69%), Gaps = 12/362 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI
Sbjct: 86 LGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL +D+ +M+ELK
Sbjct: 146 QLEVLGQQIGVDVYSEEDNKDVVGIATRAIEKAKEINATYMIVDTAGRLHVDETLMEELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K+ + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V
Sbjct: 206 ELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVV 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S
Sbjct: 266 GKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FD NDFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++MT EER
Sbjct: 326 KFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQSMTKEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL-------MGVM-EGGS 352
+KP++L S R+ R+A+ SG V++L+ Q QM+ MK MG M +GG
Sbjct: 384 KKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNMGAMGKGGK 441
Query: 353 LP 354
P
Sbjct: 442 FP 443
>gi|435853372|ref|YP_007314691.1| signal recognition particle protein [Halobacteroides halobius DSM
5150]
gi|433669783|gb|AGB40598.1| signal recognition particle protein [Halobacteroides halobius DSM
5150]
Length = 447
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 183/361 (50%), Positives = 246/361 (68%), Gaps = 5/361 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S++ FA + PTVI++AGLQG GKTT KLA LK QGK+ +LVAGD+YRPAAI
Sbjct: 87 MGGTQSKISFASNPPTVIMMAGLQGAGKTTTVGKLAKQLKNQGKNPLLVAGDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+++ PV++ G + P IAK + A+ DVVI+DTAGRL ID+ +MDELK
Sbjct: 147 QLQVLGDRLDQPVFSMGDKQSPVDIAKAAINNAESNGHDVVIIDTAGRLHIDEELMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E+LLVVDAMTGQ+A + F+ +G+ G +LTKLDGD+RGGAALS+ V+
Sbjct: 207 QIKSEVIPHEILLVVDAMTGQDAVNVAEEFDDALGVDGVVLTKLDGDARGGAALSISSVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GE++++LEPF+PDRM+ RILGMGDVLS +EKA+E M +E A+E+++K+
Sbjct: 267 GKPIKFVGTGEKLDNLEPFHPDRMSSRILGMGDVLSLIEKAEEQMDEERAKELEQKLREK 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F DFL Q V MG + ++GMIPG GK + EK L +EA+I +MT EER
Sbjct: 327 KFTLEDFLDQLEQVRNMGPLDEILGMIPGAGK-QLKNLNMDEKQLDYIEAIINSMTIEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG--GSLPALSN 358
PE++ S RR+R+A SG + QQV++L+ Q Q + M L +G G L N
Sbjct: 386 RNPEIINGS--RRRRIAAGSGTSVQQVNRLLKQFKQTKKMMDQLGDAQKGMAGKLKGKMN 443
Query: 359 L 359
L
Sbjct: 444 L 444
>gi|406669313|ref|ZP_11076592.1| signal recognition particle protein [Facklamia ignava CCUG 37419]
gi|405583826|gb|EKB57757.1| signal recognition particle protein [Facklamia ignava CCUG 37419]
Length = 496
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 177/382 (46%), Positives = 260/382 (68%), Gaps = 22/382 (5%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGK--SCMLVAGDVYRPAA 58
MGGE + L +K PTVI++AGLQG GKTT KL NYL K + +LVA DVYRPAA
Sbjct: 87 MGGEQAPLNISKQPPTVIMMAGLQGAGKTTTVGKLTNYLSKHHQLNRPLLVAADVYRPAA 146
Query: 59 IDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDE 118
IDQL +G+Q+G V+ GT+V P Q+A L AK + DVVI+DTAGRL +++ +M+E
Sbjct: 147 IDQLQTIGQQIGAEVFAQGTDVNPVQLATDALAHAKLQGNDVVIIDTAGRLHVNEELMNE 206
Query: 119 LKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKE 178
L+++K ++P E+LL VDAMTGQ+A + FN + ITG I+TKLDGD+RGGAALS++
Sbjct: 207 LRNIKSAVHPDEILLTVDAMTGQDATNVAEAFNDALDITGVIITKLDGDTRGGAALSIRA 266
Query: 179 VSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIM 238
++ KPIK G+GE+++ LEPF+PDRMAGRILGMGD+L+ +EKAQ+ + +AE M +KI
Sbjct: 267 ITEKPIKFTGQGEQLDALEPFHPDRMAGRILGMGDMLTLIEKAQQDFDEAEAERMAEKIK 326
Query: 239 SANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMT 296
A+FDFNDF++Q V +MG + ++ +IPG+ KI P Q ++K + ++ ++ +MT
Sbjct: 327 DASFDFNDFIQQMDQVTKMGPLKDLMKLIPGVNKI-PGFDQFDVSDKDMARLKGIVMSMT 385
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ---------------MRVRM 341
PEERE P+++++S RR+R+A+ SG+ +V+QL+ Q Q MR M
Sbjct: 386 PEERENPDIISQS--RRRRIARGSGRELNEVNQLIKQFNQTRKMMSQMSQGKNGSMRKMM 443
Query: 342 KNLMGVMEGGSLPALSNLEDAL 363
K + + +G +P + +L + +
Sbjct: 444 KQMKNLPKGQGMPDMGDLSNLM 465
>gi|336419495|ref|ZP_08599757.1| signal recognition particle protein [Fusobacterium sp. 11_3_2]
gi|336163626|gb|EGN66544.1| signal recognition particle protein [Fusobacterium sp. 11_3_2]
Length = 443
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 182/361 (50%), Positives = 254/361 (70%), Gaps = 11/361 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI
Sbjct: 86 LGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL +++ +M+ELK
Sbjct: 146 QLQVLGQQIGVDVYSEENSKDVVGIATRAIEKAKEINATYMIVDTAGRLHVNETLMEELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K+ + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V
Sbjct: 206 ELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVV 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S
Sbjct: 266 GKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FD NDFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++MT EER
Sbjct: 326 KFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQSMTKEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL------MGVM-EGGSL 353
+KP++L S R+ R+A+ SG V++L+ Q QM+ MK MG+M +GG
Sbjct: 384 KKPDILKAS--RKIRIAKGSGTEVSDVNKLLKQFDQMKSMMKMFSSGKMPMGLMGKGGKF 441
Query: 354 P 354
P
Sbjct: 442 P 442
>gi|390934862|ref|YP_006392367.1| signal recognition particle protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570363|gb|AFK86768.1| signal recognition particle protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 446
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 172/344 (50%), Positives = 241/344 (70%), Gaps = 2/344 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG + S++ F+ PTVI++ GLQG GKTT S KLANYLK +GKS +LVA D+YRPAAI
Sbjct: 87 MGSKESKINFSDKPPTVIMMVGLQGSGKTTTSGKLANYLKSKGKSPVLVACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G + VPV++ G + P IAK ++ AK N +VVI+DTAGRL +D+ +MDELK
Sbjct: 147 QLQVVGSSINVPVFSMGDKTSPVDIAKASIDFAKNNNYNVVIIDTAGRLHVDEELMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K ++P E+LLVVDAMTGQ+ + +FN ++ + G ILTKLDGD+RGGAALSVK V+
Sbjct: 207 NIKDAVHPDEILLVVDAMTGQDVVNVAESFNEKLDVDGVILTKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK + GE+ D+E F+PDRMA RILGMGDVLS +EKAQ + ++ A E+QKKI+
Sbjct: 267 HKPIKFIASGEKFTDIEVFHPDRMASRILGMGDVLSLIEKAQAQIDEKKALELQKKILEQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F F+DFL Q + + MG + ++ MIPG+ + ++K +K +EA+I++MT EER
Sbjct: 327 QFSFDDFLDQLQGLKNMGPIDQLFSMIPGVNMSKLKGINISDKDIKRIEAIIQSMTKEER 386
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+ P ++ S R+KR+A SG + QQV+ L+ Q Q + MK
Sbjct: 387 QNPSIINGS--RKKRIAAGSGTSIQQVNSLLKQFEQTKKMMKQF 428
>gi|333897182|ref|YP_004471056.1| signal recognition particle protein [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112447|gb|AEF17384.1| signal recognition particle protein [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 446
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 173/344 (50%), Positives = 241/344 (70%), Gaps = 2/344 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG + S++ F+ PTVI++ GLQG GKTT S KLANYL+ +GKS +LVA D+YRPAAI
Sbjct: 87 MGSKESKINFSDKPPTVIMMVGLQGSGKTTTSGKLANYLRSKGKSPVLVACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G + VPV++ G + P IAK ++ A+ N +VVI+DTAGRL +D+ +MDELK
Sbjct: 147 QLQVVGSSINVPVFSMGDKTSPVDIAKASIDFARNNNYNVVIIDTAGRLHVDEELMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K +NP E+LLVVDAMTGQ+ + +FN ++ I G ILTKLDGD+RGGAALSVK V+
Sbjct: 207 NIKDAVNPDEILLVVDAMTGQDVVNVAESFNEKLDIDGVILTKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK + GE+ D+E F+PDRMA RILGMGDVLS +EKAQ + ++ A E+QKKI+
Sbjct: 267 RKPIKFIASGEKFTDIEVFHPDRMASRILGMGDVLSLIEKAQAQIDEKKALELQKKILEQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F F+DFL Q + + MG + ++ MIPG+ V ++K +K +EA+I++MT EER
Sbjct: 327 QFSFDDFLDQLQGLKNMGPIDQLFSMIPGVNMSKLKGVNISDKDIKRIEAIIQSMTKEER 386
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+ P ++ S R+KR+A SG + QQV+ L+ Q Q + MK
Sbjct: 387 QNPSIINGS--RKKRIAAGSGTSIQQVNSLLKQFEQTKKMMKQF 428
>gi|307244407|ref|ZP_07526518.1| signal recognition particle protein [Peptostreptococcus stomatis
DSM 17678]
gi|306492226|gb|EFM64268.1| signal recognition particle protein [Peptostreptococcus stomatis
DSM 17678]
Length = 452
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 175/345 (50%), Positives = 246/345 (71%), Gaps = 6/345 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S+L ++ PTVI++ GLQG GKTT S KL YLKK GKS +LVA DVYRPAAI
Sbjct: 87 MGDVQSKLTYSPQPPTVIMMVGLQGAGKTTTSGKLGGYLKKDGKSPLLVACDVYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++GE++ +PV+ G +V P +IAK+ LE AK + DVVI+DTAGRL +D+ +M ELK
Sbjct: 147 QLQVVGEKLDLPVFAMGDQVSPVEIAKKALEHAKSHSNDVVIIDTAGRLHVDEVLMQELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K +NP E+LLVVD+MTGQ+A + +FN +GI G +LTKLDGD+RGGAALS++ V+
Sbjct: 207 DIKTQVNPQEILLVVDSMTGQDAVNVSESFNEILGIDGVVLTKLDGDTRGGAALSIRAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK +G GE++++LEPFYPDRMA RILGMGDVLS +EKA+ + E A+E+ +K+
Sbjct: 267 QKPIKFIGMGEKLDNLEPFYPDRMASRILGMGDVLSLIEKAESALDMEKAKELGQKLKKN 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE---KSLKIMEAMIEAMTP 297
DF DFL Q V +G + +++ ++PGMG I Q+ + + K + +A+I++MT
Sbjct: 327 EMDFEDFLMQLEQVQNLGPLDKLLELVPGMGNIK-GQIGDLDSKGKEINRTKAIIQSMTL 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
EER P++L S R+KR+A+ SG + Q V++L+ Q +M+ MK
Sbjct: 386 EERRNPQILNAS--RKKRIARGSGTSVQDVNRLIKQFNEMKKMMK 428
>gi|294786046|ref|ZP_06751331.1| signal recognition particle protein [Fusobacterium sp. 3_1_27]
gi|294486268|gb|EFG33633.1| signal recognition particle protein [Fusobacterium sp. 3_1_27]
Length = 444
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 182/362 (50%), Positives = 253/362 (69%), Gaps = 12/362 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI
Sbjct: 86 LGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL ID+ +M+ELK
Sbjct: 146 QLQVLGQQIGVDVYSEEDTKDVVGIATRAIEKAKEINATYMIVDTAGRLHIDETLMEELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++KR + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V
Sbjct: 206 ELKRAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVV 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S
Sbjct: 266 GKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FD NDFLKQ +T+ R+GS+ ++ +IPG+ KI + AEK +K +EA+I++MT EER
Sbjct: 326 KFDLNDFLKQLQTIKRLGSLGGILKLIPGIPKID--DLAPAEKEMKKVEAIIQSMTKEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMGVMEGGS 352
+KP++L S R+ R+A+ SG V++L+ Q QM+ MK N+ + +GG
Sbjct: 384 KKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNIGAMGKGGK 441
Query: 353 LP 354
P
Sbjct: 442 FP 443
>gi|237741085|ref|ZP_04571566.1| signal recognition particle protein [Fusobacterium sp. 4_1_13]
gi|256846224|ref|ZP_05551681.1| signal recognition particle protein [Fusobacterium sp. 3_1_36A2]
gi|229430617|gb|EEO40829.1| signal recognition particle protein [Fusobacterium sp. 4_1_13]
gi|256717993|gb|EEU31549.1| signal recognition particle protein [Fusobacterium sp. 3_1_36A2]
Length = 444
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 182/362 (50%), Positives = 253/362 (69%), Gaps = 12/362 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI
Sbjct: 86 LGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL ID+ +M+ELK
Sbjct: 146 QLQVLGQQIGVDVYSEEDTKDVVGIATRAIEKAKEINATYMIVDTAGRLHIDETLMEELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++KR + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V
Sbjct: 206 ELKRAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVV 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S
Sbjct: 266 GKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FD NDFLKQ +T+ R+GS+ ++ +IPG+ KI + AEK +K +EA+I++MT EER
Sbjct: 326 KFDLNDFLKQLQTIKRLGSLGGILKLIPGIPKID--DLAPAEKEMKKVEAIIQSMTKEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMGVMEGGS 352
+KP++L S R+ R+A+ SG V++L+ Q QM+ MK N+ + +GG
Sbjct: 384 KKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNIGAMGKGGK 441
Query: 353 LP 354
P
Sbjct: 442 FP 443
>gi|365157114|ref|ZP_09353395.1| signal recognition particle protein [Bacillus smithii 7_3_47FAA]
gi|363625848|gb|EHL76859.1| signal recognition particle protein [Bacillus smithii 7_3_47FAA]
Length = 446
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 173/346 (50%), Positives = 253/346 (73%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ AK PTV+++ GLQG GKTT + KLAN L KK + +LVA D+YRPAAI
Sbjct: 87 MGGEQSQIAVAKRPPTVVMMVGLQGAGKTTTTGKLANLLRKKYNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IA++ +E+AK+++ D V++DTAGRL ID+ +M+EL
Sbjct: 147 KQLETLGKQLNMPVFSLGDQVSPVEIAQKAIEKAKEEHYDYVLIDTAGRLHIDENLMEEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K ++ + P E+ LVVDAMTGQ+A + +F+ ++GITG ILTKLDGD+RGGAALS++ V
Sbjct: 207 KQIQSLTKPEEIFLVVDAMTGQDAVNVAQSFDEQLGITGVILTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE+M+ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+++++KI +
Sbjct: 267 TGKPIKFAGMGEKMDALEPFHPERMASRILGMGDVLTLIEKAQASVDEEKAKQLEQKIRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
+F +DFL Q V MG + ++ MIPGM +I ++ EK + +EA+I +MT E
Sbjct: 327 MSFTLDDFLDQLGQVRSMGPLDELLKMIPGMNRIKGLNNIQIDEKQISHVEAIIRSMTKE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E+E PE++ S RRKR+A+ SG T Q+V++L+ Q +M+ MK +
Sbjct: 387 EKEHPEIINSS--RRKRIAKGSGTTIQEVNRLLKQFEEMKKMMKQM 430
>gi|421146007|ref|ZP_15605809.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
gi|395487592|gb|EJG08545.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
Length = 444
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 182/362 (50%), Positives = 253/362 (69%), Gaps = 12/362 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI
Sbjct: 86 LGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL ID+ +M+ELK
Sbjct: 146 QLQVLGQQIGVDVYSEEDTKDVVGIATRAIEKAKEINATYMIVDTAGRLHIDETLMEELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++KR + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V
Sbjct: 206 ELKRAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDARGGAALSIKAVV 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S
Sbjct: 266 GKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FD NDFLKQ +T+ R+GS+ ++ +IPG+ KI + AEK +K +EA+I++MT EER
Sbjct: 326 KFDLNDFLKQLQTIKRLGSLGGILKLIPGIPKID--DLAPAEKEMKKVEAIIQSMTKEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMGVMEGGS 352
+KP++L S R+ R+A+ SG V++L+ Q QM+ MK N+ + +GG
Sbjct: 384 KKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNIGAMGKGGK 441
Query: 353 LP 354
P
Sbjct: 442 FP 443
>gi|296330813|ref|ZP_06873288.1| signal recognition particle protein [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305674331|ref|YP_003866003.1| signal recognition particle protein [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296151818|gb|EFG92692.1| signal recognition particle protein [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305412575|gb|ADM37694.1| signal recognition particle protein [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 446
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 174/352 (49%), Positives = 257/352 (73%), Gaps = 4/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ AK PTVI++ GLQG GKTT S KLAN L KK + MLVA D+YRPAAI
Sbjct: 87 MGGEESKIAVAKKPPTVIMMVGLQGAGKTTTSGKLANLLRKKHNRKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D VI+DTAGRL ID +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEEHYDYVILDTAGRLHIDHELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+VK + NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V
Sbjct: 207 TNVKEIANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + ++ A+E+++K+ +
Sbjct: 267 TNTPIKFAGLGEKLDALEPFHPERMASRILGMGDVLTLIEKAQASVDEDKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+F +DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I++MT
Sbjct: 327 MSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIKSMTVL 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
E+E+P+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 387 EKEQPDIINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|347750524|ref|YP_004858089.1| signal recognition particle protein [Bacillus coagulans 36D1]
gi|347583042|gb|AEO99308.1| signal recognition particle protein [Bacillus coagulans 36D1]
Length = 447
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 174/353 (49%), Positives = 258/353 (73%), Gaps = 4/353 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGG S++ AK PTVI++ GLQG GKTT S KLAN L KK ++ +LVA D+YRPAAI
Sbjct: 87 MGGSQSKIAVAKRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRTPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+G+PV++ G ++ P +IA+Q +E+AK+++ D VI+DTAGRL ID +M+EL
Sbjct: 147 KQLETLGKQLGMPVFSLGDKISPVEIARQAIEKAKEEHHDTVIIDTAGRLHIDSELMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K++K + +P E+ LVVDAMTGQ+A + +FN ++GITG ILTKLDGD+RGGAALS++ V
Sbjct: 207 KEIKELAHPDEIFLVVDAMTGQDAVNVAQSFNDQLGITGVILTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK G GE+M+ LEPF+P+RMA RILGMGD+LS +EKAQE + +E A ++KK+
Sbjct: 267 TEKPIKFAGMGEKMDALEPFHPERMASRILGMGDILSLIEKAQETVDEEKARALEKKMRD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
+F +DFL+Q V +MG + ++ MIPG ++ ++ EK + +EA+I++MT +
Sbjct: 327 QSFTLDDFLEQLGQVRKMGPLGDILKMIPGANRMKGMDNLQIDEKQIAHVEAIIQSMTKQ 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 351
E+ +P+++ S R+KR+A+ SG+ Q+V++L+ Q +M+ MK L G+ + G
Sbjct: 387 EKIRPDIINAS--RKKRIAKGSGRPVQEVNRLLKQFEEMKKMMKQLQGMNQKG 437
>gi|431794557|ref|YP_007221462.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430784783|gb|AGA70066.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 453
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 181/347 (52%), Positives = 247/347 (71%), Gaps = 6/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S++ + PTVI+L GLQG GKTT AKLAN LKKQGK +LVA D+YRPAAI
Sbjct: 86 MGGVSSKINISSKPPTVIMLVGLQGAGKTTHGAKLANMLKKQGKHPLLVACDIYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+Q+ VPV++ G E P +IA LE A + +DVVI+DTAGRL I++ +M ELK
Sbjct: 146 QLEVLGDQIKVPVFSLGQE-NPVKIALASLEHALSQGLDVVIIDTAGRLHINEELMGELK 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K + P E+LLVVDAMTGQ+A + +F+ ++GI G I+TKLDGD+RGGAALSVK V+
Sbjct: 205 DIKAAVKPHEILLVVDAMTGQDAVNVAESFHGDLGIDGIIMTKLDGDTRGGAALSVKAVT 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK G GE+++ +EPF+PDRMA RILGMGDVL+ +EKAQE ++ A EM++K+
Sbjct: 265 GCPIKFAGIGEKLDAIEPFFPDRMASRILGMGDVLTLIEKAQEAFDEKQAREMEQKLRKQ 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK-ITPAQVREAEKSLKIMEAMIEAMTPEE 299
F +DFL Q + + +MG + ++ MIPG GK + AQ+ EK + +EA+I +MT EE
Sbjct: 325 EFTLDDFLDQMQQIKKMGPLGSLLEMIPGAGKQLKDAQID--EKDMSHVEAIIHSMTQEE 382
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R KP L+ +S R++R+A+ SG + Q+V +L+ Q QM+ MK G
Sbjct: 383 RRKPALIKDS--RKRRIAKGSGTSVQEVGRLLKQFEQMQKMMKQFAG 427
>gi|126654295|ref|ZP_01726072.1| signal recognition particle-like (SRP) component [Bacillus sp.
B14905]
gi|126589259|gb|EAZ83420.1| signal recognition particle-like (SRP) component [Bacillus sp.
B14905]
Length = 438
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 177/352 (50%), Positives = 253/352 (71%), Gaps = 4/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S + F PTVI++ GLQG GKTT S KLAN L KK + +LVA DVYRPAA+
Sbjct: 87 MGGEQSPIKFNTKPPTVIMMVGLQGAGKTTTSGKLANVLRKKYNRKPLLVAADVYRPAAV 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ GT++ P +IA+Q +E+AK+++ DVVI+DTAGRL ID+ +M EL
Sbjct: 147 QQLETLGKQLSLPVFSLGTDISPVEIARQAIEKAKEEHHDVVIIDTAGRLHIDEDLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
KD++ + P EV LVVDAMTGQ+A + +FN IGITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KDIRALKEPDEVFLVVDAMTGQDAVNVAESFNEAIGITGVVLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG GE+M+ LEPF+P+RMA RILGMGDVLS +EKAQ + + A+E+++K +
Sbjct: 267 TQKPIKFVGMGEKMDALEPFHPERMASRILGMGDVLSLIEKAQANVDEAKAKELEEKFKT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
F +DF++Q + V +MG + ++ M+PG KI V+ +K + +EA+I +MTP
Sbjct: 327 QTFTLDDFVEQLQQVKKMGPIDEILKMLPGANKIKGLDNVKVDDKQMGRVEAIIYSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
E+ PEL+ S R+KR+++ SG + Q+V++L+ Q +M+ MK + G+ G
Sbjct: 387 EKTNPELINGS--RKKRISKGSGTSIQEVNRLIKQFDEMKKMMKQMTGMASG 436
>gi|386758321|ref|YP_006231537.1| signal recognition particle protein [Bacillus sp. JS]
gi|384931603|gb|AFI28281.1| signal recognition particle protein [Bacillus sp. JS]
Length = 446
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 174/352 (49%), Positives = 257/352 (73%), Gaps = 4/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ AK PTVI++ GLQG GKTT S KLAN L KK + MLVA D+YRPAAI
Sbjct: 87 MGGEESKIAVAKRPPTVIMMVGLQGAGKTTTSGKLANLLRKKHNRKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D VI+DTAGRL ID +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEEHYDYVILDTAGRLHIDHELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+VK + NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V
Sbjct: 207 TNVKEIANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + ++ A+E+++K+ +
Sbjct: 267 TNTPIKFAGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQASVDEDKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+F +DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I++MT
Sbjct: 327 MSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIKSMTVL 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
E+E+P+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 387 EKEQPDIINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|398304074|ref|ZP_10507660.1| signal recognition particle protein [Bacillus vallismortis DV1-F-3]
Length = 446
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 174/352 (49%), Positives = 256/352 (72%), Gaps = 4/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ AK PTVI++ GLQG GKTT S KLAN L KK + MLVA D+YRPAAI
Sbjct: 87 MGGEESKIAAAKKPPTVIMMVGLQGAGKTTTSGKLANLLRKKHNRKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D VI+DTAGRL ID +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEEHYDYVILDTAGRLHIDHELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK + NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V
Sbjct: 207 TSVKEIANPEEIFLVVDSMTGQDAVNVAQSFNEQLGLTGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + ++ A+E+++K+ +
Sbjct: 267 TNTPIKFAGLGEKLDALEPFHPERMASRILGMGDVLTLIEKAQASVDEDKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+F +DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I++MT
Sbjct: 327 MSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIKSMTVR 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
E+E+P+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 387 EKEQPDIINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|407977615|ref|ZP_11158452.1| signal recognition particle protein [Bacillus sp. HYC-10]
gi|407415868|gb|EKF37449.1| signal recognition particle protein [Bacillus sp. HYC-10]
Length = 446
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 176/352 (50%), Positives = 257/352 (73%), Gaps = 4/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ AK PTVI++ GLQG GKTT + KLAN L KK + M+VA D+YRPAAI
Sbjct: 87 MGGEESKIAVAKKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMMVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D VI+DTAGRL ID+ +M EL
Sbjct: 147 QQLQTLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEEHHDYVILDTAGRLHIDEELMGEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ VK V NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V
Sbjct: 207 QKVKEVANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + Q+ A+E+++K+ +
Sbjct: 267 TNTPIKFAALGEKLDALEPFHPERMASRILGMGDVLTLIEKAQANVDQDKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+F +DFL+Q V MG + +I M+PG GK+ + V+ EK L +EA+I++MT E
Sbjct: 327 MSFTLDDFLEQLGQVRNMGPLDELIQMMPGAGKMKGLKNVQVDEKQLNHIEAIIKSMTTE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
E+E+PE++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 387 EKEQPEVINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|428279192|ref|YP_005560927.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. natto BEST195]
gi|430758979|ref|YP_007209700.1| signal recognition particle protein [Bacillus subtilis subsp.
subtilis str. BSP1]
gi|291484149|dbj|BAI85224.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. natto BEST195]
gi|430023499|gb|AGA24105.1| Signal recognition particle protein [Bacillus subtilis subsp.
subtilis str. BSP1]
Length = 446
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 174/352 (49%), Positives = 257/352 (73%), Gaps = 4/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ AK PTVI++ GLQG GKTT S KLAN L KK + MLVA D+YRPAAI
Sbjct: 87 MGGEESKIAVAKRPPTVIMMVGLQGAGKTTTSGKLANLLRKKHNRKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D VI+DTAGRL ID +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEEHYDYVILDTAGRLHIDHELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+VK + NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V
Sbjct: 207 TNVKEIANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + ++ A+E+++K+ +
Sbjct: 267 TNTPIKFAGLGEKLDALEPFHPERMASRILGMGDVLTLIEKAQASVDEDKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+F +DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I++MT
Sbjct: 327 MSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIKSMTVL 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
E+E+P+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 387 EKEQPDIINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|422933064|ref|ZP_16965988.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
gi|339891771|gb|EGQ80711.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
Length = 443
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 182/361 (50%), Positives = 254/361 (70%), Gaps = 11/361 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI
Sbjct: 86 LGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL +D+ +M+ELK
Sbjct: 146 QLQVLGQQIGVDVYSEENSEDVVGIATRAIEKAKEINATYMIVDTAGRLHVDEILMEELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K+ + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V
Sbjct: 206 ELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVV 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S
Sbjct: 266 GKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FD NDFLKQ +T+ R+GS+ ++ +IPG+ KI + AEK +K +EA+I++MT EER
Sbjct: 326 KFDLNDFLKQLQTIKRLGSLGGILKLIPGIPKID--DLAPAEKEMKKVEAIIQSMTKEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL------MGVM-EGGSL 353
+KP++L S R+ R+A+ SG V++L+ Q QM+ MK MG+M +GG
Sbjct: 384 KKPDILKAS--RKIRIAKGSGTEVSDVNKLLKQFDQMKSMMKMFSSGKMPMGLMGKGGKF 441
Query: 354 P 354
P
Sbjct: 442 P 442
>gi|387818670|ref|YP_005679017.1| signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Clostridium botulinum H04402 065]
gi|322806714|emb|CBZ04283.1| signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Clostridium botulinum H04402 065]
Length = 449
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 168/333 (50%), Positives = 244/333 (73%), Gaps = 2/333 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S L + S TVI+L GLQG GKTT++ KLA +L+K+ K +LVA DVYRPAAI
Sbjct: 87 MGSTESTLNSSTSGLTVIMLVGLQGAGKTTMAGKLALHLRKRNKRPLLVACDVYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G+Q+ +PV+T G ++ P I+K +E AK +VVI+DTAGRL ID+ +MDEL
Sbjct: 147 QLQVVGKQIDIPVFTMGDKLNPVDISKAAIEHAKNNKNNVVIIDTAGRLHIDEELMDELH 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K +NP+E+LLVVDAMTGQ+A + FN ++ I+G ILTKLDGD+RGGAALS+K ++
Sbjct: 207 NIKEEVNPSEILLVVDAMTGQDAVNVANNFNDKLDISGVILTKLDGDTRGGAALSIKSMT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GE+M DLE FYPDRMA RILGMGDVLS +EKAQ+ + +E A+E+ +++++
Sbjct: 267 GKPIKFVGLGEKMNDLEVFYPDRMASRILGMGDVLSLIEKAQQSIDEEKAKEIGERMLNQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPE 298
F+F DFL+ + + ++G +++++ MIPGM ++ + +EK +K EA+I +MT +
Sbjct: 327 EFNFEDFLESMQQMKKLGPINKLLEMIPGMNSKELKNIDLSSSEKEMKKTEAIISSMTIK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 331
ER P L++ SP R++R+A+ SG Q V++L+
Sbjct: 387 ERRNPSLISSSPSRKRRIAKGSGTNVQHVNKLL 419
>gi|148380407|ref|YP_001254948.1| signal recognition particle protein [Clostridium botulinum A str.
ATCC 3502]
gi|153933476|ref|YP_001384624.1| signal recognition particle protein [Clostridium botulinum A str.
ATCC 19397]
gi|153935337|ref|YP_001388141.1| signal recognition particle protein [Clostridium botulinum A str.
Hall]
gi|168180670|ref|ZP_02615334.1| signal recognition particle protein [Clostridium botulinum NCTC
2916]
gi|168184655|ref|ZP_02619319.1| signal recognition particle protein [Clostridium botulinum Bf]
gi|226949802|ref|YP_002804893.1| signal recognition particle protein [Clostridium botulinum A2 str.
Kyoto]
gi|237795885|ref|YP_002863437.1| signal recognition particle protein [Clostridium botulinum Ba4 str.
657]
gi|421837788|ref|ZP_16271860.1| signal recognition particle protein [Clostridium botulinum
CFSAN001627]
gi|148289891|emb|CAL83999.1| signal recognition particle protein [Clostridium botulinum A str.
ATCC 3502]
gi|152929520|gb|ABS35020.1| signal recognition particle protein [Clostridium botulinum A str.
ATCC 19397]
gi|152931251|gb|ABS36750.1| signal recognition particle protein [Clostridium botulinum A str.
Hall]
gi|182668381|gb|EDT80360.1| signal recognition particle protein [Clostridium botulinum NCTC
2916]
gi|182672287|gb|EDT84248.1| signal recognition particle protein [Clostridium botulinum Bf]
gi|226841461|gb|ACO84127.1| signal recognition particle protein [Clostridium botulinum A2 str.
Kyoto]
gi|229263878|gb|ACQ54911.1| signal recognition particle protein [Clostridium botulinum Ba4 str.
657]
gi|409739977|gb|EKN40451.1| signal recognition particle protein [Clostridium botulinum
CFSAN001627]
Length = 449
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 170/338 (50%), Positives = 246/338 (72%), Gaps = 3/338 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S L + S TVI+L GLQG GKTT++ KLA +L+K+ K +LVA DVYRPAAI
Sbjct: 87 MGSTESTLNSSTSGLTVIMLVGLQGAGKTTMAGKLALHLRKRNKRPLLVACDVYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G+Q+ +PV+T G ++ P I+K +E AK +VVI+DTAGRL ID+ +MDEL
Sbjct: 147 QLQVVGKQIDIPVFTMGDKLNPVDISKAAIEHAKNNKNNVVIIDTAGRLHIDEELMDELH 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K +NP+E+LLVVDAMTGQ+A + FN ++ I+G ILTKLDGD+RGGAALS+K ++
Sbjct: 207 NIKEEVNPSEILLVVDAMTGQDAVNVANNFNDKLDISGVILTKLDGDTRGGAALSIKSMT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GE+M DLE FYPDRMA RILGMGDVLS +EKAQ+ + +E A+E+ +++++
Sbjct: 267 GKPIKFVGLGEKMNDLEVFYPDRMASRILGMGDVLSLIEKAQQSIDEEKAKEIGERMLNQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPE 298
F+F DFL+ + + ++G +++++ MIPGM ++ + +EK +K EA+I +MT +
Sbjct: 327 EFNFEDFLESMQQMKKLGPINKLLEMIPGMNSKELKNIDLSSSEKEMKKTEAIISSMTIK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 336
ER P L++ SP R++R+A+ SG Q V++L+ FQ
Sbjct: 387 ERRNPSLISSSPSRKRRIAKGSGTNVQHVNKLLKD-FQ 423
>gi|16078661|ref|NP_389480.1| signal recognition particle-like (SRP) GTPase [Bacillus subtilis
subsp. subtilis str. 168]
gi|221309473|ref|ZP_03591320.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. subtilis str. 168]
gi|221313798|ref|ZP_03595603.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. subtilis str. NCIB 3610]
gi|221318722|ref|ZP_03600016.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. subtilis str. JH642]
gi|221322993|ref|ZP_03604287.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. subtilis str. SMY]
gi|321315364|ref|YP_004207651.1| signal recognition particle protein [Bacillus subtilis BSn5]
gi|402775843|ref|YP_006629787.1| signal recognition particle-like (SRP) GTPase [Bacillus subtilis
QB928]
gi|418033256|ref|ZP_12671733.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. subtilis str. SC-8]
gi|452914716|ref|ZP_21963343.1| signal recognition particle protein [Bacillus subtilis MB73/2]
gi|586037|sp|P37105.1|SRP54_BACSU RecName: Full=Signal recognition particle protein; AltName:
Full=Fifty-four homolog
gi|2309080|dbj|BAA21691.1| Ffh [Bacillus subtilis]
gi|2633970|emb|CAB13471.1| signal recognition particle-like (SRP) GTPase [Bacillus subtilis
subsp. subtilis str. 168]
gi|320021638|gb|ADV96624.1| signal recognition particle protein [Bacillus subtilis BSn5]
gi|351469404|gb|EHA29580.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. subtilis str. SC-8]
gi|402481025|gb|AFQ57534.1| Signal recognition particle-like (SRP) GTPase [Bacillus subtilis
QB928]
gi|407959004|dbj|BAM52244.1| signal recognition particle-like (SRP) GTPase [Synechocystis sp.
PCC 6803]
gi|407964581|dbj|BAM57820.1| signal recognition particle-like (SRP) GTPase [Bacillus subtilis
BEST7003]
gi|452117136|gb|EME07531.1| signal recognition particle protein [Bacillus subtilis MB73/2]
Length = 446
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 174/352 (49%), Positives = 257/352 (73%), Gaps = 4/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ AK PTVI++ GLQG GKTT S KLAN L KK + MLVA D+YRPAAI
Sbjct: 87 MGGEESKIAVAKRPPTVIMMVGLQGAGKTTTSGKLANLLRKKHNRKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D VI+DTAGRL ID +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEEHYDYVILDTAGRLHIDHELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+VK + NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V
Sbjct: 207 TNVKEIANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + ++ A+E+++K+ +
Sbjct: 267 TNTPIKFAGLGEKLDALEPFHPERMASRILGMGDVLTLIEKAQASVDEDKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+F +DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I++MT
Sbjct: 327 MSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIKSMTVL 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
E+E+P+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 387 EKEQPDIINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|402836125|ref|ZP_10884675.1| signal recognition particle protein [Mogibacterium sp. CM50]
gi|402272137|gb|EJU21360.1| signal recognition particle protein [Mogibacterium sp. CM50]
Length = 447
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 177/346 (51%), Positives = 239/346 (69%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S+L ++ S TV ++ GLQG GKTT KLA +LK+ GK ML A DVYRPAAID
Sbjct: 87 MGGANSKLTYSPSGFTVYMMVGLQGTGKTTTCGKLAAWLKQNGKKPMLCACDVYRPAAID 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G+ V PV+T +P IAK +EEAK+K +V+IVDTAGRLQID+A+MDEL
Sbjct: 147 QLEVVGKAVNTPVFTMRESNEPLAIAKAAVEEAKRKGCNVLIVDTAGRLQIDEALMDELV 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K+ + P E+LL VDA+TGQ+A + FN +GI G I+TK+DGDSRGGAALS K V+
Sbjct: 207 QLKKGIRPHEILLAVDALTGQDAVNIAAGFNETLGIDGIIMTKMDGDSRGGAALSTKMVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE+ LEPF+PDR+A RILGMGDV+S +E+A+ +E+A M++K
Sbjct: 267 GKPIKFMGTGEKYNALEPFHPDRIASRILGMGDVMSLIEQAENAYSEEEAARMEEKFRKN 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQV--REAEKSLKIMEAMIEAMTPE 298
FD NDFL Q + RMG ++++I MIPG+ Q+ + +K L M+A+I++MT E
Sbjct: 327 QFDLNDFLNQMGQINRMGGIAKLIDMIPGISAADKKQIDFEKGKKDLDRMKAIIQSMTNE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ERE P +L S RRKR+A SG+T Q ++QL+ Q QM+ +K
Sbjct: 387 ERENPNILNAS--RRKRIAAGSGQTVQSINQLIKQFDQMKAMIKQF 430
>gi|323702674|ref|ZP_08114335.1| signal recognition particle protein [Desulfotomaculum nigrificans
DSM 574]
gi|333923302|ref|YP_004496882.1| signal recognition particle protein [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|323532337|gb|EGB22215.1| signal recognition particle protein [Desulfotomaculum nigrificans
DSM 574]
gi|333748863|gb|AEF93970.1| signal recognition particle protein [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 444
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 183/360 (50%), Positives = 252/360 (70%), Gaps = 8/360 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG +++ + PT+I+L GLQG GKTT + KLA L KQG+ +LVAGD+YRPAAI
Sbjct: 86 LGGTQAKINLSPKPPTIIMLVGLQGAGKTTTAGKLAKLLSKQGRRPLLVAGDIYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ +PV++ G E P +IAK +E+A DVVI+DTAGRL I++ +MDEL
Sbjct: 146 QLQVLGEQLNIPVFSLGQE-DPVKIAKAAVEQANSTGRDVVIIDTAGRLHINEELMDELA 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + P E+LLVVDAMTGQEA + TFN ++G+ G I+TKLDGD+RGGAALSV++V+
Sbjct: 205 NIKASVKPHEILLVVDAMTGQEAVNVADTFNQKLGLDGIIMTKLDGDARGGAALSVRKVT 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK G GE+++ LEPF+PDRMA RILGMGDVL+ +EKAQ E A ++ +KI A
Sbjct: 265 GCPIKFAGMGEKLDALEPFHPDRMADRILGMGDVLTLIEKAQANFDAEQAAKLNRKIRQA 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA---EKSLKIMEAMIEAMTP 297
F+ DFL+Q + V +MG + +V+ MIPGM K+T Q+++ EK L +EA+I +MTP
Sbjct: 325 EFNLEDFLEQMQQVKKMGPLEQVLSMIPGMNKLT-KQLKDQQIDEKELAQVEAIIYSMTP 383
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG-SLPAL 356
ER+ PE + S R+KR+A+ SG Q V+QL+ Q Q R MK + + + G LP L
Sbjct: 384 WERQHPERIDGS--RKKRIARGSGTRVQDVNQLLKQFEQTRKMMKQIASMTKSGRKLPKL 441
>gi|350265910|ref|YP_004877217.1| signal recognition particle protein [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|384175339|ref|YP_005556724.1| signal recognition particle protein [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
gi|449094290|ref|YP_007426781.1| signal recognition particle-like (SRP) GTPase [Bacillus subtilis
XF-1]
gi|349594563|gb|AEP90750.1| signal recognition particle protein [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
gi|349598797|gb|AEP86585.1| signal recognition particle protein [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|449028205|gb|AGE63444.1| signal recognition particle-like (SRP) GTPase [Bacillus subtilis
XF-1]
Length = 446
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 174/352 (49%), Positives = 257/352 (73%), Gaps = 4/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ AK PTVI++ GLQG GKTT S KLAN L KK + MLVA D+YRPAAI
Sbjct: 87 MGGEESKIAVAKRPPTVIMMVGLQGAGKTTTSGKLANLLRKKHNRKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D VI+DTAGRL ID +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEEHYDYVILDTAGRLHIDHELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+VK + NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V
Sbjct: 207 TNVKEIANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + ++ A+E+++K+ +
Sbjct: 267 TNTPIKFAGLGEKLDALEPFHPERMASRILGMGDVLTLIEKAQASVDEDKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+F +DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I++MT
Sbjct: 327 MSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIKSMTVL 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
E+E+P+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 387 EKEQPDIINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|452974499|gb|EME74319.1| signal recognition particle protein [Bacillus sonorensis L12]
Length = 446
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 177/352 (50%), Positives = 255/352 (72%), Gaps = 4/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ AK PTVI++ GLQG GKTT + KLAN L KK ++ +LVA D+YRPAAI
Sbjct: 87 MGGEESKIAAAKRPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRNPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG Q+ +PV++ G +V P IAKQ +E+AK+ + D VI+DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGRQLDMPVFSLGDQVSPVDIAKQAIEKAKEDHHDYVIIDTAGRLHIDEELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K VK P E+ LVVD+MTGQ+A + +FN ++G+TG ILTKLDGD+RGGAALS++ V
Sbjct: 207 KKVKETSQPDEIFLVVDSMTGQDAVNVAKSFNEQLGVTGVILTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TNTPIKFAGLGEKLDALEPFHPERMASRILGMGDVLTLIEKAQANVDEEKAKELEQKMKT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+F +DFL+Q V MG + +I M+PG GK+ + V+ EK L +EA+I++MT +
Sbjct: 327 MSFTLDDFLEQLGQVRNMGPLDELIQMMPGAGKMKGLKNVKVDEKQLSHVEAIIKSMTGK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
E+E+PE++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 387 EKEQPEIINAS--RRKRIAKGSGTSVQEVNRLLKQFEEMKKMMKQMTNMTKG 436
>gi|254304380|ref|ZP_04971738.1| IISP Type II signal recognition particle GTPase [Fusobacterium
nucleatum subsp. polymorphum ATCC 10953]
gi|148324572|gb|EDK89822.1| IISP Type II signal recognition particle GTPase [Fusobacterium
nucleatum subsp. polymorphum ATCC 10953]
Length = 444
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 181/362 (50%), Positives = 253/362 (69%), Gaps = 12/362 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI
Sbjct: 86 LGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL +D+ +M+ELK
Sbjct: 146 QLEVLGQQIGVDVYSEEDNKDVVGIATRAIEKAKEINATYMIVDTAGRLHVDETLMEELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K+ + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V
Sbjct: 206 ELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVV 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S
Sbjct: 266 GKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FD NDFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++MT EER
Sbjct: 326 KFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQSMTKEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMGVMEGGS 352
+KP++L S R+ R+A+ SG V++L+ Q QM+ MK N+ + +GG
Sbjct: 384 KKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNIGAMGKGGK 441
Query: 353 LP 354
P
Sbjct: 442 FP 443
>gi|397904685|ref|ZP_10505586.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Caloramator australicus RC3]
gi|397162281|emb|CCJ32920.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Caloramator australicus RC3]
Length = 459
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 180/346 (52%), Positives = 241/346 (69%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S++ + PTVI+L GLQG GKTT++AKLA +L+K K +LVA D+YRPAAI
Sbjct: 87 MGSTESKINISPKPPTVIMLVGLQGAGKTTMAAKLALHLRKNNKHPLLVAADIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ILG Q+ +PV+T G +V P IAK LE AKK D+VI+DTAGRL ID+ +M EL+
Sbjct: 147 QLQILGGQIDIPVFTLGDKVNPVDIAKASLEYAKKNAKDIVIIDTAGRLHIDEELMLELE 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K+ +NP E+LLVVDAMTGQ+A + +FN ++ ITG ILTKLDGD+RGGAALSVK V+
Sbjct: 207 GIKKEVNPDEILLVVDAMTGQDAVNVAQSFNDKLDITGVILTKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK G GE++ DLE FYPDRMA RILGMGD+LS +EKAQ+ + ++ A EMQ+K+
Sbjct: 267 GKPIKYAGVGEKLSDLEIFYPDRMASRILGMGDILSLIEKAQQAIDEKKALEMQQKLERQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGM--GKITPAQVREAEKSLKIMEAMIEAMTPE 298
F DFL Q + + ++G + +I MIPG+ K+ E EK + +EA+I++MT E
Sbjct: 327 EFTLEDFLDQMQQMKKLGPLKDLIKMIPGLDTSKLDDIDFEENEKEMAKIEAIIKSMTKE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P ++ S R+KR+A+ SG T Q V++L+ Q R MK
Sbjct: 387 ERRNPSIINSS--RKKRIAKGSGTTIQDVNKLLNNFEQARKMMKQF 430
>gi|374323436|ref|YP_005076565.1| signal recognition (srp) component [Paenibacillus terrae HPL-003]
gi|357202445|gb|AET60342.1| signal recognition (srp) component [Paenibacillus terrae HPL-003]
Length = 458
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 176/363 (48%), Positives = 252/363 (69%), Gaps = 5/363 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG ++L A PTVI++ GLQG GKTT S KLA L+KQ +LVAGD+YRPAAI
Sbjct: 87 MGGSQAKLAKANKPPTVIMMVGLQGAGKTTTSGKLAKLLQKQNHRPLLVAGDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ PV+T G + P +IAKQGL+ AK D VI+DTAGRL +D+ +M+EL+
Sbjct: 147 QLQVLGEQINAPVFTLGDQTSPVEIAKQGLQHAKDNGNDYVIIDTAGRLHVDEELMEELR 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+ +NP EVLLVVD+MTGQ+A + FN + +TG +LTKLDGD+RGGAALSVK V+
Sbjct: 207 QIHANVNPDEVLLVVDSMTGQDAVNVAEHFNTSLELTGVVLTKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK GE+++ +EPF+P+RMA RILGMGD+LS +EKAQ + + A+EM++K+ +A
Sbjct: 267 GCPIKFATLGEKLDAMEPFHPERMASRILGMGDMLSLIEKAQSNIDADKAKEMERKMRNA 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEE 299
F F DFL+Q V ++G + +++ MIPGMG + + V+ +K + +EA++ +MT +E
Sbjct: 327 EFTFEDFLEQMDQVKKLGPIDQILDMIPGMGNMKQMKDVKVDDKQMGRIEAIVHSMTTQE 386
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM--EGGSLPALS 357
++ P+++ S RRKR+A SG + +V++L+ Q +MR MK +M +GG AL
Sbjct: 387 KQNPDMINHS--RRKRIAVGSGTSLAEVNRLIKQFDEMRRMMKQFSDMMGPKGGKNKALK 444
Query: 358 NLE 360
L+
Sbjct: 445 QLK 447
>gi|187778958|ref|ZP_02995431.1| hypothetical protein CLOSPO_02553 [Clostridium sporogenes ATCC
15579]
gi|187772583|gb|EDU36385.1| signal recognition particle protein [Clostridium sporogenes ATCC
15579]
Length = 449
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 170/338 (50%), Positives = 246/338 (72%), Gaps = 3/338 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S L + S TVI+L GLQG GKTT++ KLA +L+K+ K +LVA DVYRPAAI
Sbjct: 87 MGSTESTLNSSTSGLTVIMLVGLQGAGKTTMAGKLALHLRKRNKRPLLVACDVYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G+Q+ +PV+T G ++ P I+K +E AK +VVI+DTAGRL ID+ +MDEL
Sbjct: 147 QLQVVGKQIDIPVFTMGDKLSPVDISKAAIEHAKNNKNNVVIIDTAGRLHIDEELMDELH 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K +NPTE+LLVVDAMTGQ+A + FN ++ I+G ILTKLDGD+RGGAALS+K ++
Sbjct: 207 NIKEEVNPTEILLVVDAMTGQDAVNVANNFNDKLDISGVILTKLDGDTRGGAALSIKSMT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GE+M DLE FYPDRMA RILGMGDVLS +EKAQ+ + ++ A+E+ +++++
Sbjct: 267 GKPIKFVGLGEKMNDLEVFYPDRMASRILGMGDVLSLIEKAQQSIDEDKAKEIGERMLNQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPE 298
F+F DFL+ + + ++G +++++ MIPGM ++ + +EK +K EA+I +MT +
Sbjct: 327 EFNFEDFLESMQQMKKLGPINKLLEMIPGMNSKELKNIDLSSSEKEMKKTEAIISSMTIK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 336
ER P L++ SP R++R+A+ SG Q V++L+ FQ
Sbjct: 387 ERRNPSLISSSPSRKRRIAKGSGTNVQHVNKLLKD-FQ 423
>gi|237745294|ref|ZP_04575775.1| signal recognition particle, subunit FFH/SRP54 [Fusobacterium sp.
7_1]
gi|229432523|gb|EEO42735.1| signal recognition particle, subunit FFH/SRP54 [Fusobacterium sp.
7_1]
Length = 444
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 182/362 (50%), Positives = 252/362 (69%), Gaps = 12/362 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI
Sbjct: 86 LGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL +D+ +M+ELK
Sbjct: 146 QLQVLGQQIGVDVYSEENSKDVVGIATRAIEKAKEINATYMIVDTAGRLHVDEILMEELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K+ + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+ GGAALS+K V
Sbjct: 206 ELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTHGGAALSIKAVV 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S
Sbjct: 266 GKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FD NDFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++MT EER
Sbjct: 326 KFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQSMTKEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL-------MGVM-EGGS 352
+KP++L S R+ R+A+ SG V++L+ Q QM+ MK MG M +GG
Sbjct: 384 KKPDILKAS--RKIRIAKGSGTEVSDVNKLLKQFDQMKSMMKMFSSGKMPNMGAMGKGGK 441
Query: 353 LP 354
P
Sbjct: 442 FP 443
>gi|253573492|ref|ZP_04850835.1| signal recognition particle protein [Paenibacillus sp. oral taxon
786 str. D14]
gi|251847020|gb|EES75025.1| signal recognition particle protein [Paenibacillus sp. oral taxon
786 str. D14]
Length = 458
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 176/349 (50%), Positives = 246/349 (70%), Gaps = 3/349 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG ++L + PTV+++AGLQG GKTT SAKLA L K+ +LVAGD+YRPAAI
Sbjct: 87 MGGSQAKLARSNRPPTVVMMAGLQGAGKTTTSAKLAKLLLKENHRPLLVAGDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ VPV+T P +IA+Q L+ AK D V++DTAGRL +D+ +M+EL+
Sbjct: 147 QLQVLGEQIKVPVFTLPEGNSPVEIARQALQHAKDNGNDYVLIDTAGRLHVDEELMEELR 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+ V NP EVLLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAALSVK V+
Sbjct: 207 QIHEVTNPDEVLLVVDAMTGQDAVNVAESFNQQLTLTGVVLTKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK GE+++ LEPF+P+RMA RILGMGD+LS +EKAQ + E A+EM++K+ +A
Sbjct: 267 GCPIKFAALGEKIDALEPFHPERMASRILGMGDMLSLIEKAQANIDAEKAKEMERKMRNA 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEE 299
F F DFL+Q V ++G + +++ MIPGMGK+ Q V+ EK + +EA++ +MT EE
Sbjct: 327 EFTFEDFLEQMEQVKKLGPLDQLMDMIPGMGKMKQMQNVKVDEKQMSRVEAIVHSMTKEE 386
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 348
++ P+++ S RRKR+A SG T V++L+ Q +MR MK +M
Sbjct: 387 KQNPDMINHS--RRKRIAAGSGTTLADVNRLIKQFDEMRRVMKQFSDMM 433
>gi|153940237|ref|YP_001391747.1| signal recognition particle protein [Clostridium botulinum F str.
Langeland]
gi|170754416|ref|YP_001781992.1| signal recognition particle protein [Clostridium botulinum B1 str.
Okra]
gi|384462755|ref|YP_005675350.1| signal recognition particle protein [Clostridium botulinum F str.
230613]
gi|429243872|ref|ZP_19207356.1| signal recognition particle protein [Clostridium botulinum
CFSAN001628]
gi|152936133|gb|ABS41631.1| signal recognition particle protein [Clostridium botulinum F str.
Langeland]
gi|169119628|gb|ACA43464.1| signal recognition particle protein [Clostridium botulinum B1 str.
Okra]
gi|295319772|gb|ADG00150.1| signal recognition particle protein [Clostridium botulinum F str.
230613]
gi|428759078|gb|EKX81467.1| signal recognition particle protein [Clostridium botulinum
CFSAN001628]
Length = 449
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 170/338 (50%), Positives = 246/338 (72%), Gaps = 3/338 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S L + S TVI+L GLQG GKTT++ KLA +L+K+ K +LVA DVYRPAAI
Sbjct: 87 MGSTESTLNSSTSGLTVIMLVGLQGAGKTTMAGKLALHLRKRNKRPLLVACDVYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G+Q+ +PV+T G ++ P I+K +E AK +VVI+DTAGRL ID+ +MDEL
Sbjct: 147 QLQVVGKQIDIPVFTMGDKLNPVDISKAAIEHAKNNKNNVVIIDTAGRLHIDEELMDELH 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K +NP+E+LLVVDAMTGQ+A + FN ++ I+G ILTKLDGD+RGGAALS+K ++
Sbjct: 207 NIKEEVNPSEILLVVDAMTGQDAVNVANNFNDKLDISGVILTKLDGDTRGGAALSIKSMT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GE+M DLE FYPDRMA RILGMGDVLS +EKAQ+ + +E A+E+ +++++
Sbjct: 267 GKPIKFVGLGEKMNDLEVFYPDRMASRILGMGDVLSLIEKAQQSIDEEKAKEIGERMLNQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPE 298
F+F DFL+ + + ++G +++++ MIPGM ++ + +EK +K EA+I +MT +
Sbjct: 327 EFNFEDFLESMQQMKKLGPINKLLEMIPGMNSKELKNIDLSSSEKEMKKTEAIISSMTIK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 336
ER P L++ SP R++R+A+ SG Q V++L+ FQ
Sbjct: 387 ERRNPSLISSSPSRKRRIAKGSGTNVQNVNKLLKD-FQ 423
>gi|323141933|ref|ZP_08076793.1| signal recognition particle protein [Phascolarctobacterium
succinatutens YIT 12067]
gi|322413600|gb|EFY04459.1| signal recognition particle protein [Phascolarctobacterium
succinatutens YIT 12067]
Length = 448
Score = 348 bits (892), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 179/355 (50%), Positives = 251/355 (70%), Gaps = 6/355 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG S+L A PTVI+L GLQG GKTT + KLANYLK++ K +LVAGDVYRPAAI
Sbjct: 87 LGGTQSKLTVAPKPPTVIMLVGLQGAGKTTTAGKLANYLKRKHKKPLLVAGDVYRPAAIT 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ VPV+T G +V P +IA++ +E+A D VI+DTAGRL I++ +M+EL+
Sbjct: 147 QLQVLGEQLNVPVFTLGDKVSPVEIAQKAMEKAHSLACDTVIIDTAGRLHINEELMEELR 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K ++P E+LLVVDAMTGQ+A + +F+ E+GI G I+TKLDGD+RGGA LSVK V+
Sbjct: 207 NIKGAVHPQEILLVVDAMTGQDAVTVAESFDKELGIDGLIVTKLDGDARGGAVLSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKP+KL+G GE+++ LEPF+PDRMA RILGMGD+L+ VEK Q A EM+KK+
Sbjct: 267 GKPVKLIGLGEKLDALEPFHPDRMASRILGMGDILTLVEKIQSTTDLAKALEMEKKLRKD 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA---EKSLKIMEAMIEAMTP 297
F FL Q + V ++GS+ ++G+IPGMG I+ +++EA EK +EA+I +MT
Sbjct: 327 EFTLEQFLDQMQQVKKLGSLETILGLIPGMGGIS-QKLKEANVDEKEFDRIEAIIRSMTK 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 352
+ER+KPE++ S RRKR+A G Q V++L+ + + MK + G+ + S
Sbjct: 386 KERQKPEIINGS--RRKRIAAGCGMRVQDVNKLLKNFEESKKMMKRMQGMAKFAS 438
>gi|319790268|ref|YP_004151901.1| signal recognition particle protein [Thermovibrio ammonificans
HB-1]
gi|317114770|gb|ADU97260.1| signal recognition particle protein [Thermovibrio ammonificans
HB-1]
Length = 448
Score = 348 bits (892), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 181/348 (52%), Positives = 251/348 (72%), Gaps = 8/348 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GGE ++L KS+P VILL GLQG GKTT +AKLANYLKKQGK +L + DVYRPAA+
Sbjct: 86 LGGEGAKLEL-KSKPAVILLIGLQGSGKTTTAAKLANYLKKQGKKVLLTSADVYRPAAML 144
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LG+++GVPV+ E +IAK L++AK++N DV+I+DTAGRL ID+ +++E K
Sbjct: 145 QLKKLGDKIGVPVFLEEDEKDAVKIAKDALKKAKEENYDVLIIDTAGRLHIDEELLEEAK 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K NP EVL V+DAMTGQE+ + FN +G+TG +LTK+D D+RGG ALSVK V+
Sbjct: 205 RIKEETNPDEVLFVIDAMTGQESVNIAKAFNEAVGMTGIVLTKMDSDARGGVALSVKGVT 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK G GE++ED +PFYPDR+A RILGMGD++S VEKAQEV+ +++A MQ+K++S
Sbjct: 265 GKPIKFAGVGEKIEDFQPFYPDRVASRILGMGDIVSLVEKAQEVIDEKEALSMQEKLLSG 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREA--EKSLKIMEAMIEAMT 296
F DF KQ + + R+G + +VI MIPG+G KI Q+ E +K LK +EA+I +MT
Sbjct: 325 EFTLEDFRKQLQMIQRLGPLQQVIRMIPGLGSQKILK-QLEEVIDDKKLKRIEAIINSMT 383
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
PEER ++ S R++R+A+ SG + ++V L+ Q QM++ MK +
Sbjct: 384 PEERRNHAIINAS--RKRRIARGSGTSVKEVDALLKQFVQMKMAMKQM 429
>gi|20807909|ref|NP_623080.1| Signal recognition particle GTPase [Thermoanaerobacter
tengcongensis MB4]
gi|20516476|gb|AAM24684.1| Signal recognition particle GTPase [Thermoanaerobacter
tengcongensis MB4]
Length = 447
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 178/347 (51%), Positives = 239/347 (68%), Gaps = 2/347 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S L P VI++ GLQG GKTT KLAN LKKQGK+ +LVA D RPAAI
Sbjct: 88 MGSVESRLNLGSKVPAVIMMVGLQGSGKTTACGKLANLLKKQGKNPLLVACDTVRPAAIK 147
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG + VPV+T G +V + IAK ++ AK NVDVVI+DTAGRL ID +M+EL
Sbjct: 148 QLQVLGANINVPVFTMGDKVDTADIAKASIDYAKSHNVDVVIIDTAGRLHIDDELMEELV 207
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K ++P E+LLV DAMTGQ+A + ++FN + ITG ILTKLDGD+RGGAALS+K V+
Sbjct: 208 RIKEAVHPDEILLVADAMTGQDAVNVASSFNERLDITGVILTKLDGDTRGGAALSIKAVT 267
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK VG GE++ D+EPFYPDRMA RILGMGDVL+ +EKAQ + ++ A EM +KI+S
Sbjct: 268 QKPIKYVGIGEKLGDIEPFYPDRMASRILGMGDVLTLIEKAQAAIDEKKALEMGQKILSK 327
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F DFL+Q R++ MG + +++ MIPG+ K V +EK LK +EA+I +MT EER
Sbjct: 328 QFTLEDFLEQLRSLKNMGPLDQLLAMIPGVNKSVLKNVEVSEKDLKRIEAIILSMTKEER 387
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
+ P ++ S R++R+A+ SG T Q+V+ L+ Q + + MK +
Sbjct: 388 QNPSIINGS--RKRRIARGSGTTIQEVNNLLKQFEETKKMMKRFADI 432
>gi|219669778|ref|YP_002460213.1| signal recognition particle protein [Desulfitobacterium hafniense
DCB-2]
gi|219540038|gb|ACL21777.1| signal recognition particle protein [Desulfitobacterium hafniense
DCB-2]
Length = 453
Score = 347 bits (891), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 178/344 (51%), Positives = 246/344 (71%), Gaps = 4/344 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S++ + PTVI+L GLQG GKTT AKLAN LKKQGK +LVA D+YRPAAI
Sbjct: 86 MGGVSSKINISSKPPTVIMLVGLQGAGKTTHGAKLANMLKKQGKHPLLVACDIYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ VPV++ G E P +IA L+ A + +DVVI+DTAGRL I++ +M EL+
Sbjct: 146 QLEVLGEQIKVPVFSLGQE-NPVKIAAASLQHANSQGLDVVIIDTAGRLHINEELMGELR 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + P E+LLVVDAMTGQ+A + +F+ E+G+ G ILTKLDGD+RGGAALSVK V+
Sbjct: 205 EIKTAVKPHEILLVVDAMTGQDAVNVAESFHNELGVDGIILTKLDGDTRGGAALSVKAVT 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK G GE+M+ +EPF+P+RMA RILGMGDVL+ +EKAQE ++ A EM++K+
Sbjct: 265 GCPIKFAGVGEKMDAIEPFFPERMASRILGMGDVLTLIEKAQEAFDEKQAREMEQKLRKQ 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F +DFL Q + + +MG ++ ++ MIPG+GK V+ EK + +EA+I +MT EER
Sbjct: 325 EFTLDDFLDQMQQLKKMGPLNSLLEMIPGVGK-QMKDVQVDEKDMAHVEAIIHSMTAEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
KP L+ +S R++R+A+ SG + Q+V +L+ Q QM+ MK
Sbjct: 384 RKPALIKDS--RKRRIAKGSGTSVQEVGRLLKQFEQMQKMMKQF 425
>gi|424827553|ref|ZP_18252340.1| signal recognition particle protein [Clostridium sporogenes PA
3679]
gi|365979993|gb|EHN16034.1| signal recognition particle protein [Clostridium sporogenes PA
3679]
Length = 449
Score = 347 bits (891), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 169/338 (50%), Positives = 246/338 (72%), Gaps = 3/338 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S L + S TVI+L GLQG GKTT++ KLA +L+K+ K +LVA DVYRPAAI
Sbjct: 87 MGSTESTLNSSTSGLTVIMLVGLQGAGKTTMAGKLALHLRKRNKRPLLVACDVYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G+Q+ +PV+T G ++ P I+K +E AK +VVI+DTAGRL ID+ +MDEL
Sbjct: 147 QLQVVGKQIDIPVFTMGDKLSPVDISKAAIEHAKNNKNNVVIIDTAGRLHIDEELMDELH 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K +NPTE+LLVVD+MTGQ+A + FN ++ I+G ILTKLDGD+RGGAALS+K ++
Sbjct: 207 NIKEEVNPTEILLVVDSMTGQDAVNVANNFNDKLDISGVILTKLDGDTRGGAALSIKSMT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GE+M DLE FYPDRMA RILGMGDVLS +EKAQ+ + ++ A+E+ +++++
Sbjct: 267 GKPIKFVGLGEKMNDLEVFYPDRMASRILGMGDVLSLIEKAQQSIDEDKAKEIGERMLNQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPE 298
F+F DFL+ + + ++G +++++ MIPGM ++ + +EK +K EA+I +MT +
Sbjct: 327 EFNFEDFLESMQQMKKLGPINKLLEMIPGMNSKELKNIDLSSSEKEMKKTEAIISSMTIK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 336
ER P L++ SP R++R+A+ SG Q V++L+ FQ
Sbjct: 387 ERRNPSLISSSPSRKRRIAKGSGTNVQHVNKLLKD-FQ 423
>gi|221633791|ref|YP_002523017.1| signal recognition particle protein [Thermomicrobium roseum DSM
5159]
gi|221156000|gb|ACM05127.1| signal recognition particle protein [Thermomicrobium roseum DSM
5159]
Length = 488
Score = 347 bits (891), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 176/352 (50%), Positives = 252/352 (71%), Gaps = 4/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+G E L++A PT+I+L GLQG GKTT AKL +L+K+G+ +LVA D+YRPAA++
Sbjct: 86 LGSERVPLLWASQPPTIIMLVGLQGSGKTTQVAKLGYHLRKEGRRPLLVAADIYRPAAVE 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LG+Q +PVY GT+V P + K ++ A+ + + VI+DTAGRLQID+ MM EL+
Sbjct: 146 QLRTLGKQHDLPVYDEGTKVDPVETVKHAVKVARDQGYNPVIIDTAGRLQIDEPMMQELE 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+ + PTE+LLV DAMTGQEA + F+ + +TG ILTKLDGD+RGGAALS++ V
Sbjct: 206 RMAEAVRPTEILLVADAMTGQEAVNVAKEFHRRLSLTGLILTKLDGDARGGAALSIRAVV 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK +G GER++ LEPFYPDR+A RILGMGDVLS +EKAQ+ + QE+ +++Q+K+++
Sbjct: 266 GVPIKFIGTGERVDALEPFYPDRLATRILGMGDVLSLIEKAQQQISQEEGKKLQEKLLAG 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT-PAQVREAEKSLKIMEAMIEAMTPEE 299
FD DFL+Q + V +MG +++++ MIPGMG++ QV+ ++ K +EA+I +MTPEE
Sbjct: 326 TFDLEDFLRQLQQVKKMGPLTQLLEMIPGMGQLLRQQQVQISDDEYKRIEAIILSMTPEE 385
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 351
R P+++ S RR+R+AQ SG T +VSQL+ Q QM+ RM +G + G
Sbjct: 386 RRNPDIINYS--RRRRIAQGSGTTIAEVSQLLTQFKQMQ-RMMAELGQLAAG 434
>gi|270290355|ref|ZP_06196580.1| signal recognition particle protein [Pediococcus acidilactici 7_4]
gi|418069039|ref|ZP_12706319.1| signal recognition particle protein [Pediococcus acidilactici
MA18/5M]
gi|427441885|ref|ZP_18925463.1| signal recognition particle protein [Pediococcus lolii NGRI 0510Q]
gi|270281136|gb|EFA26969.1| signal recognition particle protein [Pediococcus acidilactici 7_4]
gi|357537772|gb|EHJ21795.1| signal recognition particle protein [Pediococcus acidilactici
MA18/5M]
gi|425786911|dbj|GAC46251.1| signal recognition particle protein [Pediococcus lolii NGRI 0510Q]
Length = 477
Score = 347 bits (891), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 182/357 (50%), Positives = 245/357 (68%), Gaps = 10/357 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E S L A PTVI++AGLQG GKTT + KLA LK + K+ +L+A DVYRPAAI
Sbjct: 87 MGTEASPLNQAPKIPTVIMMAGLQGAGKTTTTGKLALKLKNEKKARPLLIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQLV +GEQ+ VPVY GT+V P +I + GLE+A + D V +DTAGRLQID+ +M EL
Sbjct: 147 DQLVQVGEQIDVPVYQEGTDVSPVEIVRHGLEQAAENKNDYVFIDTAGRLQIDEKLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
D+K + +P E+LLVVDAMTGQ A FN ++ +TG ILTKLDGD+RGGAALS++ V
Sbjct: 207 ADIKDLAHPDEILLVVDAMTGQNAVNTAEGFNDKLDVTGVILTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG+GE+MEDL+ F+PDRMA RILGMGD+L+ +EK Q+ ++ A EM +KI
Sbjct: 267 TGKPIKFVGQGEKMEDLDVFHPDRMASRILGMGDMLTLIEKTQKEFDEKQAAEMSQKIRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDFL Q V MG + ++ MIPGM PA + K ++ +A++ +MT
Sbjct: 327 NTFDFNDFLDQMNQVQSMGPIEDIVKMIPGMAN-NPALKNINVDPKDIEHTKAIVYSMTK 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL----MGVMEG 350
+ERE P++L +P RR+R+A SG+ +V++++ Q QM+ M + G MEG
Sbjct: 386 QERENPDIL--NPSRRRRIAAGSGRPVVEVNRMIKQFNQMKKMMNQMSKGNFGPMEG 440
>gi|357014337|ref|ZP_09079336.1| Ffh [Paenibacillus elgii B69]
Length = 455
Score = 347 bits (891), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 176/361 (48%), Positives = 253/361 (70%), Gaps = 3/361 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S+L A PTVI++ GLQG GKTT + KLA L +Q +L AGD+YRPAAI
Sbjct: 87 MGGTQSKLARANKPPTVIMMVGLQGAGKTTTTGKLAKLLLQQNHRPLLAAGDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ VPV++ G +V P +IAKQ L+ AK N D +IVDTAGRL ID+++M+ELK
Sbjct: 147 QLQVLGEQLKVPVFSLGDKVSPVEIAKQALQHAKDHNNDYLIVDTAGRLHIDESLMEELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+ ++P E+LLVVDAMTGQ+A + +F+ ++ +TG +LTKLDGD+RGGAA+SVK V+
Sbjct: 207 QIVEAVSPDEILLVVDAMTGQDAVNVAESFHKQLELTGVVLTKLDGDTRGGAAISVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK GE+++ LEPF+P+RMA RILGMGD+L+ +EKAQ + + A+EM++K+ +A
Sbjct: 267 GCPIKFAAMGEKLDALEPFHPERMASRILGMGDMLTLIEKAQASIDADKAKEMERKLRTA 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEE 299
F F+DFL+Q V ++G + +++ M+PG GKI + V+ +K + + A++++MT EE
Sbjct: 327 EFTFDDFLEQMEQVKKLGPLDQLLDMLPGAGKIKGMKDVKVDDKQMSRVAAIVKSMTKEE 386
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 359
R+ P+LL+ S RRKR+A SG + Q V++ + Q MR MK G+M L NL
Sbjct: 387 RQNPDLLSTS--RRKRLAAGSGNSVQDVNRFIKQFEDMRKMMKQFSGMMGPKGAKQLKNL 444
Query: 360 E 360
+
Sbjct: 445 K 445
>gi|323484786|ref|ZP_08090143.1| hypothetical protein HMPREF9474_01894 [Clostridium symbiosum
WAL-14163]
gi|323691859|ref|ZP_08106113.1| signal recognition particle protein [Clostridium symbiosum
WAL-14673]
gi|355627802|ref|ZP_09049433.1| signal recognition particle protein [Clostridium sp. 7_3_54FAA]
gi|323401892|gb|EGA94233.1| hypothetical protein HMPREF9474_01894 [Clostridium symbiosum
WAL-14163]
gi|323504066|gb|EGB19874.1| signal recognition particle protein [Clostridium symbiosum
WAL-14673]
gi|354820127|gb|EHF04553.1| signal recognition particle protein [Clostridium sp. 7_3_54FAA]
Length = 454
Score = 347 bits (891), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 179/345 (51%), Positives = 245/345 (71%), Gaps = 3/345 (0%)
Query: 1 MGGEVSELVFAKSRP-TVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAI 59
MG E++E+ S TVI++AGLQG GKTT +AK+A LK +G++ +L A DVYRPAA+
Sbjct: 87 MGSEMTEIALKPSNEITVIMMAGLQGAGKTTTTAKIAGKLKAKGRNPLLAACDVYRPAAV 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL GE+ GVPV++ GT KP IAK +E A K +VVI+DTAGRL ID+ MM+EL
Sbjct: 147 EQLQKNGEKQGVPVFSMGTGHKPVNIAKAAIEHASKNGHNVVIIDTAGRLHIDEDMMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++K ++ + LLVVDAMTGQ+A + FN +IGI G ILTK+DGD+RGGAALS+K V
Sbjct: 207 VEIKENVDVYQTLLVVDAMTGQDAVNVAGMFNDKIGIDGVILTKMDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPI VG GE++ DLE FYPDRMA RILGMGDVLS ++KA VM +E A+E+ KKI
Sbjct: 267 TGKPIIYVGMGEKLSDLEQFYPDRMASRILGMGDVLSIIDKAAAVMDEEKAKELSKKIKK 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
A FD+NDFL Q R + +MG MS ++ M+PGM ++ + EK++ +EA+I +MT EE
Sbjct: 327 AEFDYNDFLDQMRQIKQMGGMSSILTMMPGMNQLKGVDLDGNEKAMDRVEAIILSMTDEE 386
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
R P+L+ +P R+KR+A +G +V+++V Q +M+ MK L
Sbjct: 387 RRNPDLI--NPSRKKRIANGAGVDIAEVNRMVKQFGEMKKMMKQL 429
>gi|366053084|ref|ZP_09450806.1| signal recognition particle protein [Lactobacillus suebicus KCTC
3549]
Length = 480
Score = 347 bits (890), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 180/365 (49%), Positives = 260/365 (71%), Gaps = 15/365 (4%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAI 59
MG E +L ++ PT+I++AGLQG GKTT + KLA LK Q M +A D+YRPAAI
Sbjct: 87 MGEEAVDLNKSEKIPTIIMMAGLQGAGKTTTAGKLALKLKNDQNARPMFIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL + E + VPV+ GT+V P +I +QGLE+A+ ++ D VI+DTAGRLQID+ +MDEL
Sbjct: 147 DQLEQVAESIDVPVFQLGTDVDPVEIVRQGLEQARDQHNDYVIIDTAGRLQIDEKLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++K++ +P E+LLVVDAMTGQ A FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 ANIKKLADPDEILLVVDAMTGQNAVETAQGFNDKLDITGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG+GE+M+DL+ F+PDRMA RILGMGD+L+ +EKAQ+ +E A++ +K+
Sbjct: 267 TGKPIKFVGQGEKMDDLDVFHPDRMASRILGMGDMLTLIEKAQKDFDEEQAQKTVEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE---KSLKIMEAMIEAMT 296
+FDFNDFL Q V +MGSM ++ MIPGM PA ++ A K ++ ++A++ +MT
Sbjct: 327 NSFDFNDFLDQMSQVQKMGSMEDIMKMIPGMAN-NPA-LKNANIDPKDMEHIKAIVYSMT 384
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-----NLMGV--ME 349
PEERE P++L +P RR+R+A +G+ +V++++ Q QM+ MK N+ G+ +
Sbjct: 385 PEERENPDVL--NPSRRRRLAAGAGRPVVEVNRMIKQFNQMKKMMKQVSNGNMSGMENLM 442
Query: 350 GGSLP 354
GG++P
Sbjct: 443 GGNMP 447
>gi|312127973|ref|YP_003992847.1| signal recognition particle protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311777992|gb|ADQ07478.1| signal recognition particle protein [Caldicellulosiruptor
hydrothermalis 108]
Length = 443
Score = 347 bits (890), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 174/344 (50%), Positives = 239/344 (69%), Gaps = 2/344 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG ++L F+ S ++ ++ GLQG GKTT + KLA LKKQGK+ +LVA D+YRPAAI
Sbjct: 86 LGGSDTKLTFSPSGFSIYMMVGLQGSGKTTTAGKLAGLLKKQGKNPLLVACDIYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++ ++VGV + +IAK+G+E AK DV IVDTAGRL I++ +MDEL
Sbjct: 146 QLEVVAQKVGVKCFADYNSKDAVKIAKEGIEFAKASRCDVAIVDTAGRLHINQELMDELV 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + PTE+LLV+DAMTGQ+A + T FN ++GI G I+TKLDGD+RGGAALSVK ++
Sbjct: 206 SIKNAIKPTEILLVLDAMTGQDAVNVATAFNEQLGIDGIIMTKLDGDTRGGAALSVKAIT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK G GE+MEDLE F+PDRMA RILGMGD+L+ +EKAQE + Q+ AEE++KK+ S
Sbjct: 266 GKPIKFAGVGEKMEDLEAFHPDRMASRILGMGDILTLIEKAQEAIDQKKAEELEKKLRSM 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F DFL Q + + +MG +S++I MIPG+ EK LK +EA+I +MT EER
Sbjct: 326 QFTLEDFLDQLKQIKKMGPLSQIISMIPGIKLKGDVDFDAGEKELKKIEAIINSMTKEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+ P ++ S R++R+A SG T Q V++L+ Q M+ MK
Sbjct: 386 QDPSIINSS--RKRRIAMGSGTTVQDVNRLLKQFEDMKRMMKQF 427
>gi|409196181|ref|ZP_11224844.1| signal recognition particle protein [Marinilabilia salmonicolor JCM
21150]
Length = 443
Score = 347 bits (890), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 178/343 (51%), Positives = 243/343 (70%), Gaps = 5/343 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG +++ K P VIL++GLQG GKTT + KLAN +K K+GK +LVAGDVYRPAAI
Sbjct: 86 MGGSSTDIEL-KGNPAVILISGLQGSGKTTFTGKLANLIKSKRGKQPLLVAGDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +LGEQ+GVPVYT P ++AK G++EAK K DVVI+DTAGRL ID+ MM+E+
Sbjct: 145 NQLQVLGEQIGVPVYTEEGNTDPVKLAKDGIKEAKSKGHDVVIIDTAGRLAIDEEMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K+ +NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAA+S++ V
Sbjct: 205 SAIKKAVNPHETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAISIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+M+ L+ F+P RMA RILGMGD++S VEKAQE E+A+++QKKI
Sbjct: 265 VDKPIKFVGMGEKMDALDVFHPSRMADRILGMGDIVSLVEKAQEQYDSEEAQKLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F+F+DFL Q + + +MG++ + MIPGMGK+ V + + K +EA+I +MTPEE
Sbjct: 325 NQFNFDDFLSQIKQIKKMGNLKDLAAMIPGMGKMLK-NVDIDDDAFKGVEAIISSMTPEE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
R++P L+ S RRKR+A SG + Q+V++L+ Q R M+
Sbjct: 384 RQQPTLINGS--RRKRIATGSGTSIQEVNRLMKQFEDTRKAMR 424
>gi|265751175|ref|ZP_06087238.1| signal recognition particle protein [Bacteroides sp. 3_1_33FAA]
gi|423228545|ref|ZP_17214951.1| signal recognition particle protein [Bacteroides dorei CL02T00C15]
gi|423243810|ref|ZP_17224886.1| signal recognition particle protein [Bacteroides dorei CL02T12C06]
gi|263238071|gb|EEZ23521.1| signal recognition particle protein [Bacteroides sp. 3_1_33FAA]
gi|392635952|gb|EIY29840.1| signal recognition particle protein [Bacteroides dorei CL02T00C15]
gi|392644176|gb|EIY37919.1| signal recognition particle protein [Bacteroides dorei CL02T12C06]
Length = 440
Score = 347 bits (890), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 181/357 (50%), Positives = 245/357 (68%), Gaps = 5/357 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE +ELV +SRP VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI
Sbjct: 86 MGGETAELVL-ESRPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +LGEQ+ VPVY+ P QIA + EAK K D+VIVDTAGRL ID+ MM+E+
Sbjct: 145 EQLRVLGEQIEVPVYSELDSKNPVQIALNAIHEAKAKGYDLVIVDTAGRLAIDEQMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K+ +NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 EAIKKAINPDETLFVVDSMTGQDAVNTAREFNERLDFNGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP+E
Sbjct: 325 NQFDFNDFLSQIHQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPQE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 356
R PE+L + RR R+A+ SG + Q+V++L+ Q Q R MK + G G +P L
Sbjct: 384 RTNPEIL--NGTRRTRIAKGSGTSIQEVNRLLKQFDQTRKMMKMVTGSKMGKMMPKL 438
>gi|312793157|ref|YP_004026080.1| signal recognition particle protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|344996632|ref|YP_004798975.1| signal recognition particle protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|312180297|gb|ADQ40467.1| signal recognition particle protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|343964851|gb|AEM73998.1| signal recognition particle protein [Caldicellulosiruptor
lactoaceticus 6A]
Length = 443
Score = 347 bits (890), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 174/344 (50%), Positives = 239/344 (69%), Gaps = 2/344 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG ++L F+ S ++ ++ GLQG GKTT + KLA LKKQGK+ +LVA D+YRPAAI
Sbjct: 86 LGGSDTKLTFSPSGFSIYMMVGLQGSGKTTTAGKLAGLLKKQGKNPLLVACDIYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++ ++VGV + +IAK+G+E AK DV IVDTAGRL I++ +MDEL
Sbjct: 146 QLEVVAQKVGVKCFADYNSKDAVKIAKEGIEFAKANRCDVAIVDTAGRLHINQELMDELV 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + PTE+LLV+DAMTGQ+A + T FN ++GI G I+TKLDGD+RGGAALSVK ++
Sbjct: 206 SIKNAIKPTEILLVLDAMTGQDAVNVATAFNEQLGIDGIIMTKLDGDTRGGAALSVKAIT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK G GE+MEDLE F+PDRMA RILGMGD+L+ +EKAQE + Q+ AEE++KK+ S
Sbjct: 266 GKPIKFAGVGEKMEDLEAFHPDRMASRILGMGDILTLIEKAQEAIDQKKAEELEKKLRSM 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F DFL Q + + +MG +S++I MIPG+ EK LK +EA+I +MT EER
Sbjct: 326 QFTLEDFLDQLKQIKKMGPLSQIISMIPGIKLKGDVDFDAGEKELKKIEAIINSMTKEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+ P ++ S R++R+A SG T Q V++L+ Q M+ MK
Sbjct: 386 QDPSIINSS--RKRRIAMGSGTTVQDVNRLLKQFEDMKKMMKQF 427
>gi|219849542|ref|YP_002463975.1| signal recognition particle protein [Chloroflexus aggregans DSM
9485]
gi|219543801|gb|ACL25539.1| signal recognition particle protein [Chloroflexus aggregans DSM
9485]
Length = 450
Score = 347 bits (890), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 176/346 (50%), Positives = 248/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+G E L A+ PTVI+L GLQG GKTT++AKLA +L+K+GK +LVA DVYRPAAI
Sbjct: 86 LGTEHVPLQEARPGPTVIMLVGLQGTGKTTLAAKLALHLRKKGKRVLLVAADVYRPAAIT 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LG Q+ +PVY+ GT+ P IA+ LE A+K+ +VVI+DTAGRLQID+ +M EL+
Sbjct: 146 QLQALGRQLNIPVYSEGTQASPPDIAEHALEHARKELFNVVIIDTAGRLQIDEPLMQELE 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++ ++PTE LLVVDAMTGQEA + TFN + +TG ++TK+DGD+RGGAALSV+ V+
Sbjct: 206 QIEARVHPTERLLVVDAMTGQEAVRVAETFNQRVKLTGVVMTKMDGDARGGAALSVRAVT 265
Query: 181 GKPIKLVGRGERME--DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIM 238
G PIK + GE+++ LE F+PDR+A RILGMGDVLS +E+A+++ E A++MQK++
Sbjct: 266 GVPIKFLSTGEKVDGNTLEIFHPDRLASRILGMGDVLSLIERAEQLYDAEQAKKMQKRLS 325
Query: 239 SANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDF DFL + ++G + ++I MIPG+ ++ + E+ +K +EA+I +MTPE
Sbjct: 326 KGEFDFEDFLNSLHQMRKLGPLQQIIAMIPGLNQLARNEELLDERHVKRVEAIIYSMTPE 385
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER PE++ S RR+R+A+ SG + Q+VSQLV Q QM+ MK L
Sbjct: 386 ERRHPEIIKGS--RRERIARGSGTSVQEVSQLVKQFQQMQRMMKQL 429
>gi|304384767|ref|ZP_07367113.1| signal recognition particle protein [Pediococcus acidilactici DSM
20284]
gi|304328961|gb|EFL96181.1| signal recognition particle protein [Pediococcus acidilactici DSM
20284]
Length = 487
Score = 347 bits (889), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 182/357 (50%), Positives = 245/357 (68%), Gaps = 10/357 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E S L A PTVI++AGLQG GKTT + KLA LK + K+ +L+A DVYRPAAI
Sbjct: 97 MGTEASPLNQAPKIPTVIMMAGLQGAGKTTTTGKLALKLKNEKKARPLLIAADVYRPAAI 156
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQLV +GEQ+ VPVY GT+V P +I + GLE+A + D V +DTAGRLQID+ +M EL
Sbjct: 157 DQLVQVGEQIDVPVYQEGTDVSPVEIVRHGLEQAAENKNDYVFIDTAGRLQIDEKLMQEL 216
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
D+K + +P E+LLVVDAMTGQ A FN ++ +TG ILTKLDGD+RGGAALS++ V
Sbjct: 217 ADIKDLAHPDEILLVVDAMTGQNAVNTAEGFNDKLDVTGVILTKLDGDTRGGAALSIRAV 276
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG+GE+MEDL+ F+PDRMA RILGMGD+L+ +EK Q+ ++ A EM +KI
Sbjct: 277 TGKPIKFVGQGEKMEDLDVFHPDRMASRILGMGDMLTLIEKTQKEFDEKQAAEMSQKIRE 336
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDFL Q V MG + ++ MIPGM PA + K ++ +A++ +MT
Sbjct: 337 NTFDFNDFLDQMNQVQSMGPIEDIVKMIPGMAN-NPALKNINVDPKDIEHTKAIVYSMTK 395
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL----MGVMEG 350
+ERE P++L +P RR+R+A SG+ +V++++ Q QM+ M + G MEG
Sbjct: 396 QERENPDIL--NPSRRRRIAAGSGRPVVEVNRMIKQFNQMKKMMNQMSKGNFGPMEG 450
>gi|335429766|ref|ZP_08556664.1| signal recognition particle protein [Haloplasma contractile
SSD-17B]
gi|334889776|gb|EGM28061.1| signal recognition particle protein [Haloplasma contractile
SSD-17B]
Length = 472
Score = 347 bits (889), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 167/335 (49%), Positives = 243/335 (72%), Gaps = 4/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MG + + F TVI+L GLQG GKTT + KLANY+ KK K ++VA D+YRPAAI
Sbjct: 87 MGEDAHGVAFKGHGTTVIMLVGLQGAGKTTHAGKLANYMRKKHNKKPLMVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ VPV++ GT+V P +IAK+ L++A + D+VI+DTAGRL ID+A+MDEL
Sbjct: 147 DQLETVGKQLNVPVFSMGTDVSPVEIAKKALQQATENKNDLVIIDTAGRLHIDEALMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ VK + P E+LL VDAMTGQ+A + +F+ ++ +TGAILTKLDGD+RGGAALS+++V
Sbjct: 207 QQVKEIAKPDEILLTVDAMTGQDAVTVADSFHKQLNVTGAILTKLDGDTRGGAALSIRKV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PIK +G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ+ + +E+A +M KK
Sbjct: 267 TGVPIKFMGLGEQLDKIEVFHPERMASRILGMGDVLTLIEKAQDAIDEEEAMDMAKKFKE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
A FD+NDF KQ + + R+G++ ++ MIPGMGK V +K +EA+I +MT EE
Sbjct: 327 ATFDYNDFKKQIKQIKRLGNLKGIMKMIPGMGK-QLNNVDIDDKQFNYIEAIINSMTKEE 385
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
R P L++ S RR+R+A+ +G+ +V++++ Q
Sbjct: 386 RRNPNLMSSS--RRRRIAEGAGRNISEVNRIIKQF 418
>gi|227824776|ref|ZP_03989608.1| signal recognition particle protein [Acidaminococcus sp. D21]
gi|226905275|gb|EEH91193.1| signal recognition particle protein [Acidaminococcus sp. D21]
Length = 448
Score = 347 bits (889), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 174/349 (49%), Positives = 247/349 (70%), Gaps = 4/349 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GGE S+L F+ + PTVI+LAGLQG GKTT KLANYL+K GK ++VAGDVYRPAAI
Sbjct: 87 LGGEQSKLQFSSNPPTVIMLAGLQGAGKTTSIGKLANYLRKNGKKPLMVAGDVYRPAAIT 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G+++ +PV++ G+EV P IA++ ++ A D V++DTAGRL ID+ +MDELK
Sbjct: 147 QLEVIGKELDMPVFSMGSEVSPVTIAQEAIKRANALLCDTVLIDTAGRLHIDEKLMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K ++P E+LLVVDAMTGQ+A + FN +GITG I+TKLDGD+RGGA LSVK V+
Sbjct: 207 NIKSAVHPDEILLVVDAMTGQDAVTVAEAFNKALGITGLIVTKLDGDARGGAVLSVKSVA 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
P+K VG GE+++ L+PFYPDRMA RILGMGDVLS +EKAQE + + A+ + + +
Sbjct: 267 DCPVKFVGMGEKLDALQPFYPDRMASRILGMGDVLSLIEKAQEAIDVDSAKRLAESMKHN 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPE 298
F + FL Q + V R+GS+ ++ MIPGMGK + V K ++ +EA+I +MTP+
Sbjct: 327 EFTLDMFLDQMKQVKRLGSLESILSMIPGMGKFSKQFEGVDLDGKEVRRLEAIITSMTPK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
ER+ P ++ S RRKR+A G+ Q V++L+ Q + + MK + G+
Sbjct: 387 ERQNPRIINGS--RRKRIAAGCGQRVQDVNRLLKQFEESKKLMKTMQGM 433
>gi|261419395|ref|YP_003253077.1| signal recognition particle protein [Geobacillus sp. Y412MC61]
gi|261375852|gb|ACX78595.1| signal recognition particle protein [Geobacillus sp. Y412MC61]
Length = 469
Score = 347 bits (889), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 172/336 (51%), Positives = 245/336 (72%), Gaps = 4/336 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAI 59
MGGE S++ AK PTV+++ GLQG GKTT + KLAN L+K + +LVA DVYRPAAI
Sbjct: 87 MGGEQSQIAVAKKPPTVVMMVGLQGAGKTTTTGKLANLLRKRHNRKPLLVAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G P +IAKQ LE AK+++ D V++DTAGRL ID+A+MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGEHANPVEIAKQALERAKEEHYDYVLIDTAGRLHIDEALMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K + P E+ LVVDAMTGQ+A + +F+ ++GITG ILTKLDGD+RGGAALS++ V
Sbjct: 207 KQMKEAVKPDEIFLVVDAMTGQDAVNVAQSFHEQLGITGVILTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PIK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TGAPIKFAGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQAAVDEEKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT-PAQVREAEKSLKIMEAMIEAMTPE 298
A F +DFL+Q V ++G + +I M+PG KI A ++ EK + +EA+I +MT E
Sbjct: 327 ATFTLDDFLEQLGQVRKLGPLDELIKMLPGANKIKGLANIQVDEKQIARVEAIIRSMTKE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
E+ PE++ S R+KR+A+ SG T Q+V++L+ Q
Sbjct: 387 EKTHPEIINAS--RKKRIAKGSGTTVQEVNRLLKQF 420
>gi|283798055|ref|ZP_06347208.1| signal recognition particle protein [Clostridium sp. M62/1]
gi|291074194|gb|EFE11558.1| signal recognition particle protein [Clostridium sp. M62/1]
gi|295091808|emb|CBK77915.1| signal recognition particle protein [Clostridium cf.
saccharolyticum K10]
Length = 452
Score = 347 bits (889), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 178/348 (51%), Positives = 248/348 (71%), Gaps = 9/348 (2%)
Query: 1 MGGEVSELVFAKSRP----TVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRP 56
MG E++E+ RP TVIL+AGLQG GKTT +AK+A LK +G+S +L A D+YRP
Sbjct: 87 MGSEMTEIAL---RPANEITVILMAGLQGAGKTTTTAKIAGKLKAKGRSPLLAACDIYRP 143
Query: 57 AAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMM 116
AAI+QL I GE+ GVPV++ GT KP IAK +E A K +VVI+DTAGRL ID+ MM
Sbjct: 144 AAIEQLKINGEKQGVPVFSMGTGHKPVNIAKAAIEHAAKNGNNVVILDTAGRLHIDEDMM 203
Query: 117 DELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSV 176
+EL ++K ++ + LL+VDAMTGQ+A + FN +IGI G ILTK+DGD+RGGAALS+
Sbjct: 204 NELVEIKENVSVDQTLLIVDAMTGQDAVNVAGMFNDKIGIDGVILTKMDGDTRGGAALSI 263
Query: 177 KEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKK 236
K V+GKPI VG GE++ DLE FYPDRMA RILGMGD++S ++KA V+ +E A+E+ +K
Sbjct: 264 KAVTGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDIMSIIDKATAVIDEEKAKELSQK 323
Query: 237 IMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMT 296
+ A FD+NDFL Q R + +MG M+ ++ M+PGM ++ + EK ++ +EA+I +MT
Sbjct: 324 LKKAEFDYNDFLDQMRQIKKMGGMASILNMMPGMNQLKDVDLDGNEKVMERVEAIILSMT 383
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
EER P+L+ +P R+KR+A+ +G +V++LV Q QM+ MK L
Sbjct: 384 KEERSNPDLI--NPSRKKRIARGAGVDIAEVNRLVKQFEQMKKMMKQL 429
>gi|334340367|ref|YP_004545347.1| signal recognition particle protein [Desulfotomaculum ruminis DSM
2154]
gi|334091721|gb|AEG60061.1| signal recognition particle protein [Desulfotomaculum ruminis DSM
2154]
Length = 451
Score = 346 bits (888), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 178/350 (50%), Positives = 249/350 (71%), Gaps = 7/350 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG S++ A PT+I+L GLQG GKTT + KLA L KQG+ +LVA D+YRPAAI
Sbjct: 86 LGGTQSKINIASKPPTIIMLVGLQGAGKTTTAGKLAKLLSKQGRRPLLVAADIYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ +PV+T G E P +IA+ +E+A D+VI+DTAGRL I++ +MDEL
Sbjct: 146 QLQVLGEQLKMPVFTLGQE-NPVKIAQAAVEDANSTGRDLVIIDTAGRLHINEELMDELA 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + P E+LLVVDAMTGQEA + +FN ++G+ G I+TKLDGD+RGGAALSV++V+
Sbjct: 205 NIKGTVKPHEILLVVDAMTGQEAVNVADSFNQKLGLDGIIMTKLDGDARGGAALSVRKVT 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK G GE+++ LEPF+PDRMA RILGMGD+L+ +EKAQ E A ++ +KI A
Sbjct: 265 GCPIKFAGMGEKLDALEPFHPDRMADRILGMGDMLTLIEKAQANFDAEQAAKLNQKIRKA 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA---EKSLKIMEAMIEAMTP 297
+F+ DFL Q + V ++G + +V+GMIPGMGK+T Q+++ EK L +EA+I +MTP
Sbjct: 325 DFNLEDFLDQMQQVKKLGPLEQVLGMIPGMGKLT-KQLKDQQIDEKELGQVEAIIHSMTP 383
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
ER+ PE + S R+KR+A+ SG Q ++QL+ Q Q + MK L G+
Sbjct: 384 WERQHPERIDGS--RKKRIARGSGNRVQDINQLLKQFEQTKKMMKQLSGL 431
>gi|352683795|ref|YP_004895779.1| signal recognition particle protein [Acidaminococcus intestini
RyC-MR95]
gi|350278449|gb|AEQ21639.1| signal recognition particle protein [Acidaminococcus intestini
RyC-MR95]
Length = 448
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 174/349 (49%), Positives = 247/349 (70%), Gaps = 4/349 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GGE S+L F+ + PTVI+LAGLQG GKTT KLANYL+K GK ++VAGDVYRPAAI
Sbjct: 87 LGGEQSKLQFSSNPPTVIMLAGLQGAGKTTSIGKLANYLRKNGKKPLMVAGDVYRPAAIT 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G+++ +PV++ G+EV P IA++ ++ A D V++DTAGRL ID+ +MDELK
Sbjct: 147 QLEVIGKELDMPVFSMGSEVSPVTIAQEAIKRANALLCDTVLIDTAGRLHIDEKLMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K ++P E+LLVVDAMTGQ+A + FN +GITG I+TKLDGD+RGGA LSVK V+
Sbjct: 207 NIKTAVHPDEILLVVDAMTGQDAVTVAEAFNKALGITGLIVTKLDGDARGGAVLSVKSVA 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
P+K VG GE+++ L+PFYPDRMA RILGMGDVLS +EKAQE + + A+ + + +
Sbjct: 267 DCPVKFVGMGEKLDALQPFYPDRMASRILGMGDVLSLIEKAQEAIDVDSAKRLAESMKHN 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPE 298
F + FL Q + V R+GS+ ++ MIPGMGK + V K ++ +EA+I +MTP+
Sbjct: 327 EFTLDMFLDQMKQVKRLGSLESILSMIPGMGKFSKQFEGVDLDGKEVRRLEAIITSMTPK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
ER+ P ++ S RRKR+A G+ Q V++L+ Q + + MK + G+
Sbjct: 387 ERQNPRIINGS--RRKRIAAGCGQRVQDVNRLLKQFEESKKLMKTMQGM 433
>gi|319646021|ref|ZP_08000251.1| signal recognition particle protein [Bacillus sp. BT1B_CT2]
gi|317391771|gb|EFV72568.1| signal recognition particle protein [Bacillus sp. BT1B_CT2]
Length = 451
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 175/352 (49%), Positives = 257/352 (73%), Gaps = 4/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ AK PTVI++ GLQG GKTT + KLAN L KK ++ +LVA D+YRPAAI
Sbjct: 87 MGGEESKIAAAKRPPTVIMMVGLQGAGKTTSTGKLANLLRKKHNRNPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+ + D V++DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDKVSPVEIAKQAIEKAKEDHHDYVLIDTAGRLHIDEELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ VK P E+ LVVD+MTGQ+A + +FN ++G+TG ILTKLDGD+RGGAALS++ V
Sbjct: 207 EQVKETAQPEEIFLVVDSMTGQDAVNVAKSFNEQLGVTGVILTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TNTPIKFAGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQANVDEEKAKELEQKMKN 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+F +DFL+Q V MG + +I M+PG GK+ + V+ EK L +EA+I++MT +
Sbjct: 327 MSFTLDDFLEQLGQVRNMGPLEDLIQMMPGAGKMKGLKNVKVDEKQLSHIEAIIKSMTGK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
E+E+PE++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 387 EKEQPEIINAS--RRKRIAKGSGTSVQEVNRLLKQFEEMKKMMKQMTNMTKG 436
>gi|258514481|ref|YP_003190703.1| signal recognition particle protein [Desulfotomaculum acetoxidans
DSM 771]
gi|257778186|gb|ACV62080.1| signal recognition particle protein [Desulfotomaculum acetoxidans
DSM 771]
Length = 449
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 180/361 (49%), Positives = 249/361 (68%), Gaps = 7/361 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGE S++ A PTVI++ GL G GKTT SAKLAN+L+KQG+ +LVAGD++RPAAI
Sbjct: 87 MGGEYSKINLAPKPPTVIMMVGLHGAGKTTTSAKLANFLRKQGRRPLLVAGDIHRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ +PV+T G + P+ IA+ +E A D+VI+DTAGRL ID+ +MDEL+
Sbjct: 147 QLQVLGEQLDIPVFTMGDKQAPAVIARAAIENASNSGRDLVIIDTAGRLHIDEELMDELE 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
VK + P E+LLVVDAMTGQ+A + FN + + G I+TKLDGD+RGGAALSVK V+
Sbjct: 207 AVKSEVKPNEILLVVDAMTGQDAVNVAEVFNRRMQLNGVIMTKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK G GE+++ LE F+PDRMA RILGMGDVL+ +EKAQ E E+ KKI S
Sbjct: 267 GCPIKFAGIGEKLDALETFHPDRMADRILGMGDVLTLIEKAQANFDAEKVAELNKKIRSM 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA-EKSLKIMEAMIEAMTPEE 299
F +DFL+Q + V ++G + +V+ M PGMG + + E EK L +EA+I++MT +E
Sbjct: 327 EFTLDDFLEQLQQVKKLGPLEQVLSMFPGMGGLKKIKNLEFDEKELVYVEAIIKSMTHKE 386
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG----VMEGGSLPA 355
REKPE++ S R+R+A+ SG + Q+V++L+ Q Q + MK + +GG +P
Sbjct: 387 REKPEIINGSC--RRRIAKGSGTSVQEVNRLLKQFEQTKKMMKQFSDIDKTIKKGGKMPK 444
Query: 356 L 356
+
Sbjct: 445 I 445
>gi|52080200|ref|YP_078991.1| signal recognition particle-like (SRP) component [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|404489088|ref|YP_006713194.1| signal recognition particle protein [Bacillus licheniformis DSM 13
= ATCC 14580]
gi|423682141|ref|ZP_17656980.1| signal recognition particle-like (SRP) component [Bacillus
licheniformis WX-02]
gi|52003411|gb|AAU23353.1| signal recognition particle-like (SRP) component [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|52348079|gb|AAU40713.1| signal recognition particle protein Ffh [Bacillus licheniformis DSM
13 = ATCC 14580]
gi|383438915|gb|EID46690.1| signal recognition particle-like (SRP) component [Bacillus
licheniformis WX-02]
Length = 446
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 175/352 (49%), Positives = 257/352 (73%), Gaps = 4/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ AK PTVI++ GLQG GKTT + KLAN L KK ++ +LVA D+YRPAAI
Sbjct: 87 MGGEESKIAAAKRPPTVIMMVGLQGAGKTTSTGKLANLLRKKHNRNPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+ + D V++DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDKVSPVEIAKQAIEKAKEDHHDYVLIDTAGRLHIDEELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ VK P E+ LVVD+MTGQ+A + +FN ++G+TG ILTKLDGD+RGGAALS++ V
Sbjct: 207 EQVKETAQPEEIFLVVDSMTGQDAVNVAKSFNEQLGVTGVILTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TNTPIKFAGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQANVDEEKAKELEQKMKN 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+F +DFL+Q V MG + +I M+PG GK+ + V+ EK L +EA+I++MT +
Sbjct: 327 MSFTLDDFLEQLGQVRNMGPLEDLIQMMPGAGKMKGLKNVKVDEKQLSHIEAIIKSMTGK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
E+E+PE++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 387 EKEQPEIINAS--RRKRIAKGSGTSVQEVNRLLKQFEEMKKMMKQMTNMTKG 436
>gi|261880314|ref|ZP_06006741.1| signal recognition particle protein [Prevotella bergensis DSM
17361]
gi|270333004|gb|EFA43790.1| signal recognition particle protein [Prevotella bergensis DSM
17361]
Length = 451
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 183/347 (52%), Positives = 242/347 (69%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE SEL + +P V+L++GLQG GKTT S KLAN LK K+GK+ +LVA DVYRPAAI
Sbjct: 86 MGGEASELHLS-GKPAVVLMSGLQGSGKTTFSGKLANLLKNKRGKNPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL ++GEQVGVPVYT ++IA ++EAK K DVVIVDTAGRL +D+ MM+E+
Sbjct: 145 EQLKVVGEQVGVPVYTEEGNKNVNEIALHAIQEAKAKGNDVVIVDTAGRLAVDEDMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K ++P E L VVD+MTGQ+A FN I G +LTKLDGD+RGGAALS++ V
Sbjct: 205 ASLKEAISPDETLFVVDSMTGQDAVNTAKEFNDRIDFDGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+ME L+ F+PDRMA RILGMGDV+S VE+AQE +E+A +QKKI
Sbjct: 265 VTKPIKFIGTGEKMEALDVFHPDRMADRILGMGDVVSLVERAQEQFDEEEARRLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + +EA+I++MTP E
Sbjct: 325 NKFDFNDFLNQIEQIKKMGNLKDLAAMIPGVGKAIK-DIDIDDNAFVGIEAIIKSMTPRE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R PE+L +S RR R+A+ SG + Q+V++LV Q Q R MK + G
Sbjct: 384 RTNPEVLNQS--RRLRIAKGSGTSIQEVNRLVKQFDQTRKMMKMVTG 428
>gi|372324774|ref|ZP_09519363.1| Ffh-like signal recognition particle subunit [Oenococcus kitaharae
DSM 17330]
gi|366983582|gb|EHN58981.1| Ffh-like signal recognition particle subunit [Oenococcus kitaharae
DSM 17330]
Length = 501
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 195/409 (47%), Positives = 254/409 (62%), Gaps = 28/409 (6%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG + L + PTVI++AGLQG GKTT AKLAN LK + +L+A DVYRPAAI
Sbjct: 87 MGAQAVPLNKSPKIPTVIMMAGLQGAGKTTTVAKLANKLKNDNHARPLLIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL LG Q+ +PV+ GT+V P QI K GL++A ++ D V +DTAGRLQID+ +M EL
Sbjct: 147 EQLQTLGRQLSIPVFDQGTDVDPRQIVKDGLKQADQEKNDYVFIDTAGRLQIDELLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
KD++++ P E+LL VDAMTGQ A FN +GITG +LTKLDGD+RGGAALS++EV
Sbjct: 207 KDIEKIAKPDEILLTVDAMTGQNATETAQGFNDALGITGVVLTKLDGDTRGGAALSIREV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG GE++ DL+ FYPDRMA RILGMGD+LS +EK Q+ + + A +K+
Sbjct: 267 TGKPIKFVGEGEKVTDLDVFYPDRMASRILGMGDILSLIEKTQKDVDAKQAAAQLQKLQE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
+FDFNDFL Q + V MG M ++ MIPGM AQV+ K MEA++ +MTP
Sbjct: 327 NSFDFNDFLDQLKQVQNMGPMEDMLKMIPGMANNAALAQVQVGPKDFAHMEAIVYSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSN 358
ER PELL SP RR+R+A SG+ V++++ Q QMR M G LPA
Sbjct: 387 ERLDPELL--SPARRRRIAAGSGRPVIDVNKMIKQFKQMRQMMYKFTN--GKGGLPA--G 440
Query: 359 LEDALKSEQKAPPGTARRKRRSESRRQFVDPAS------TRPSPRGFGG 401
+ED L + G DPA + P+ GFGG
Sbjct: 441 MEDMLSGVDPSALGA--------------DPAQMGGMMPSFPNQGGFGG 475
>gi|408672491|ref|YP_006872239.1| signal recognition particle protein [Emticicia oligotrophica DSM
17448]
gi|387854115|gb|AFK02212.1| signal recognition particle protein [Emticicia oligotrophica DSM
17448]
Length = 438
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 178/359 (49%), Positives = 244/359 (67%), Gaps = 10/359 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG+ ++ V K P V+L+AGLQG GKTT S K ANYLKKQG+ +LVA DVYRPAAI
Sbjct: 86 MGGQ-AQSVNLKGSPAVVLIAGLQGSGKTTFSGKFANYLKKQGRQVLLVACDVYRPAAIT 144
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+GV V+ +IAK L AK K +VIVDTAGRL +D+ MM E++
Sbjct: 145 QLQVLGEQIGVEVFAEPENKNAVEIAKNALSYAKTKGKSIVIVDTAGRLAVDEVMMKEVE 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K+ + P+E+L VVD+MTGQ+A TFN + G +LTKLDGD+RGGAALS+K V
Sbjct: 205 EIKKAITPSEILFVVDSMTGQDAVNTAKTFNDRLDFDGVVLTKLDGDARGGAALSIKAVV 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK + GE+ME L+ FYPDRMA RILGMGDV+S VE+AQ+ +E++ + KK+
Sbjct: 265 NKPIKFISTGEKMEALDIFYPDRMASRILGMGDVISLVERAQQAFDEEESRRLNKKMREN 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVRE---AEKSLKIMEAMIEAMTP 297
FD NDFL Q + +MG++ ++GMIPG+G +Q+++ + S K +EA+I++MTP
Sbjct: 325 KFDLNDFLTQLEQIKKMGNIKDLMGMIPGVG----SQIKDIDISNDSFKPIEAIIKSMTP 380
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 356
+ER KP+++ S R+KR+A SG QQV+ L+ Q QMR MK + + G + A
Sbjct: 381 KERSKPDIIDGS--RKKRIAAGSGTDIQQVNNLLKQFDQMRSMMKKVNQMQASGKMKAF 437
>gi|423074815|ref|ZP_17063539.1| signal recognition particle protein [Desulfitobacterium hafniense
DP7]
gi|361854318|gb|EHL06402.1| signal recognition particle protein [Desulfitobacterium hafniense
DP7]
Length = 453
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 178/344 (51%), Positives = 246/344 (71%), Gaps = 4/344 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S++ + PTVI+L GLQG GKTT AKLAN LKKQGK +LVA D+YRPAAI
Sbjct: 86 MGGVSSKINISSKPPTVIMLVGLQGAGKTTHGAKLANMLKKQGKHPLLVACDIYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ VPV++ G E P +IA L+ A + +DVVI+DTAGRL I++ +M EL+
Sbjct: 146 QLEVLGEQIKVPVFSLGQE-NPVKIAAASLQHANSQGLDVVIIDTAGRLHINEELMGELR 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + P E+LLVVDAMTGQ+A + +F+ E+G+ G ILTKLDGD+RGGAALSVK V+
Sbjct: 205 EIKVSVKPHEILLVVDAMTGQDAVNVAESFHNELGVDGIILTKLDGDTRGGAALSVKAVT 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK G GE+M+ +EPF+P+RMA RILGMGDVL+ +EKAQE ++ A EM++K+
Sbjct: 265 GCPIKFAGVGEKMDAIEPFFPERMASRILGMGDVLTLIEKAQEAFDEKQAREMEQKLRKQ 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F +DFL Q + + +MG ++ ++ MIPG+GK V+ EK + +EA+I +MT EER
Sbjct: 325 EFTLDDFLDQMQQLKKMGPLNSLLEMIPGVGK-QMKDVQVDEKDMAHVEAIIHSMTAEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
KP L+ +S R++R+A+ SG + Q+V +L+ Q QM+ MK
Sbjct: 384 RKPALIKDS--RKRRIAKGSGTSIQEVGRLLKQFEQMQKMMKQF 425
>gi|256820615|ref|YP_003141894.1| signal recognition particle protein [Capnocytophaga ochracea DSM
7271]
gi|315223725|ref|ZP_07865575.1| signal recognition particle protein [Capnocytophaga ochracea F0287]
gi|420158534|ref|ZP_14665351.1| signal recognition particle protein [Capnocytophaga ochracea str.
Holt 25]
gi|256582198|gb|ACU93333.1| signal recognition particle protein [Capnocytophaga ochracea DSM
7271]
gi|314946300|gb|EFS98299.1| signal recognition particle protein [Capnocytophaga ochracea F0287]
gi|394763650|gb|EJF45731.1| signal recognition particle protein [Capnocytophaga ochracea str.
Holt 25]
Length = 442
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 176/335 (52%), Positives = 240/335 (71%), Gaps = 5/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG+ + + + PTVIL++GLQG GKTT S KLANYLK K+ K +LVA DVYRPAAI
Sbjct: 86 MGGDAAGVNLS-GNPTVILMSGLQGSGKTTFSGKLANYLKNKRNKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL I+GEQVGVPV++ P IAK+G++ AK+ +++VVIVDTAGRL +D+ MM E+
Sbjct: 145 DQLHIVGEQVGVPVFSDKGNNNPVDIAKKGVQYAKENHLNVVIVDTAGRLAVDEQMMTEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++ + LNP E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAA+++K V
Sbjct: 205 SNIHKALNPQETLFVVDAMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAAITIKSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+M+ ++ FYPDRMA RILGMGDV+S VE+AQE +E A ++QKKI
Sbjct: 265 VNKPIKFVGTGEKMDAIDVFYPDRMADRILGMGDVVSLVERAQEQFDEEQARKLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFL+Q + + RMGSM ++GM+PG+GK + + + K +EA+I +MTP+E
Sbjct: 325 NQFGFDDFLEQIQQIKRMGSMKDLLGMLPGVGKAVK-DLDIKDDAFKHIEAIIHSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
R P ++ + R+KR+A+ SG+ Q+V+QL+ Q
Sbjct: 384 RNTPAIIDLN--RKKRIAKGSGRDIQEVNQLMKQF 416
>gi|352516955|ref|YP_004886272.1| signal recognition particle protein [Tetragenococcus halophilus
NBRC 12172]
gi|348601062|dbj|BAK94108.1| signal recognition particle protein [Tetragenococcus halophilus
NBRC 12172]
Length = 475
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 174/366 (47%), Positives = 258/366 (70%), Gaps = 10/366 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E L A PTVI++AGLQG GKTT + KLAN+L K + M++AGDVYRPAA+
Sbjct: 87 LGSEAVGLNKAPKIPTVIMMAGLQGAGKTTFAGKLANHLIKNENARPMMIAGDVYRPAAV 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +LG+Q+ VPV+ GTE P +I +QG+E A +K D V++DTAGRL +D+A+M+EL
Sbjct: 147 DQLKVLGQQLDVPVFEMGTEESPVEIVRQGMELAHEKKNDYVLIDTAGRLHVDEALMEEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + P E+LLVVDAMTGQ+A + +FN ++GI+G ++TKLDGD+RGGAALS++ V
Sbjct: 207 QDIKDIAQPNEILLVVDAMTGQDAVNVAESFNEQLGISGVVITKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEEM +K+
Sbjct: 267 TGAPIKFTGIGEKLTDMEVFHPDRMSSRILGMGDMLTLIEKAQQDYDEQRAEEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF++Q ++ MGSM ++ MIPGM ++ P V+ K ++ +AM+ +MTP
Sbjct: 327 NTFDFNDFIEQMDQLSNMGSMEDIMKMIPGMNQM-PGIDNVQFDPKDMERKKAMVYSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
ERE P+LL +P RR+R+A SG + +V++++ Q + R +M M G++ ++
Sbjct: 386 AEREDPDLL--NPSRRRRIAAGSGNSVIEVNRMIKQFKESR----KMMQQMSKGNMDSIP 439
Query: 358 NLEDAL 363
++ L
Sbjct: 440 GMDQML 445
>gi|89895345|ref|YP_518832.1| hypothetical protein DSY2599 [Desulfitobacterium hafniense Y51]
gi|89334793|dbj|BAE84388.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 457
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 178/344 (51%), Positives = 246/344 (71%), Gaps = 4/344 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S++ + PTVI+L GLQG GKTT AKLAN LKKQGK +LVA D+YRPAAI
Sbjct: 90 MGGVSSKINISSKPPTVIMLVGLQGAGKTTHGAKLANMLKKQGKHPLLVACDIYRPAAIK 149
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ VPV++ G E P +IA L+ A + +DVVI+DTAGRL I++ +M EL+
Sbjct: 150 QLEVLGEQIKVPVFSLGQE-NPVKIAAASLQHANSQGLDVVIIDTAGRLHINEELMGELR 208
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + P E+LLVVDAMTGQ+A + +F+ E+G+ G ILTKLDGD+RGGAALSVK V+
Sbjct: 209 EIKVSVKPHEILLVVDAMTGQDAVNVAESFHNELGVDGIILTKLDGDTRGGAALSVKAVT 268
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK G GE+M+ +EPF+P+RMA RILGMGDVL+ +EKAQE ++ A EM++K+
Sbjct: 269 GCPIKFAGVGEKMDAIEPFFPERMASRILGMGDVLTLIEKAQEAFDEKQAREMEQKLRKQ 328
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F +DFL Q + + +MG ++ ++ MIPG+GK V+ EK + +EA+I +MT EER
Sbjct: 329 EFTLDDFLDQMQQLKKMGPLNSLLEMIPGVGK-QMKDVQVDEKDMAHVEAIIHSMTAEER 387
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
KP L+ +S R++R+A+ SG + Q+V +L+ Q QM+ MK
Sbjct: 388 RKPALIKDS--RKRRIAKGSGTSIQEVGRLLKQFEQMQKMMKQF 429
>gi|393779012|ref|ZP_10367268.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
412 str. F0487]
gi|420150558|ref|ZP_14657715.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
335 str. F0486]
gi|429746642|ref|ZP_19279981.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
380 str. F0488]
gi|429756689|ref|ZP_19289274.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
324 str. F0483]
gi|392611092|gb|EIW93845.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
412 str. F0487]
gi|394751650|gb|EJF35395.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
335 str. F0486]
gi|429165764|gb|EKY07800.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
380 str. F0488]
gi|429170816|gb|EKY12477.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
324 str. F0483]
Length = 443
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 176/335 (52%), Positives = 240/335 (71%), Gaps = 5/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG+ + + + PTVIL++GLQG GKTT S KLANYLK K+ K +LVA DVYRPAAI
Sbjct: 86 MGGDAAGVNLS-GNPTVILMSGLQGSGKTTFSGKLANYLKNKRNKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL I+GEQVGVPV++ P IAK+G++ AK+ +++VVIVDTAGRL +D+ MM E+
Sbjct: 145 DQLHIVGEQVGVPVFSDKGNNNPVDIAKKGVQYAKENHLNVVIVDTAGRLAVDEQMMTEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++ + LNP E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAA+++K V
Sbjct: 205 SNIHKALNPQETLFVVDAMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAAITIKSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+M+ ++ FYPDRMA RILGMGDV+S VE+AQE +E A ++QKKI
Sbjct: 265 VNKPIKFVGTGEKMDAIDVFYPDRMADRILGMGDVVSLVERAQEQFDEEQARKLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFL+Q + + RMGSM ++GM+PG+GK + + + K +EA+I +MTP+E
Sbjct: 325 NQFGFDDFLEQIQQIKRMGSMKDLLGMLPGVGKAVK-DLDIKDDAFKHIEAIIHSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
R P ++ + R+KR+A+ SG+ Q+V+QL+ Q
Sbjct: 384 RNTPAIIDLN--RKKRIAKGSGRDIQEVNQLMKQF 416
>gi|319649591|ref|ZP_08003747.1| signal recognition particle [Bacillus sp. 2_A_57_CT2]
gi|317398753|gb|EFV79435.1| signal recognition particle [Bacillus sp. 2_A_57_CT2]
Length = 450
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 174/351 (49%), Positives = 253/351 (72%), Gaps = 4/351 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ + PTVI++ GLQG GKTT + KLAN L KK ++ MLVA D+YRPAAI
Sbjct: 87 MGGEQSKIAVSNRPPTVIMMVGLQGAGKTTTTGKLANLLRKKYNRNPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL +D+A+MDEL
Sbjct: 147 KQLETLGKQLNMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHVDEALMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K + NP E+ LVVDAMTGQ+A + +FN +G+TG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KQIKELSNPDEIFLVVDAMTGQDAVNVAQSFNDLLGLTGVVLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK VG GE+++ LE F+P+RMA RILGMGDVLS +EKAQ + +E A+E+++K+ +
Sbjct: 267 TNTPIKFVGLGEKLDALEAFHPERMASRILGMGDVLSLIEKAQANVDEEKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
A+F F+DFL Q V MG + ++ M+PG KI ++ EK + +EA+I++MT E
Sbjct: 327 ASFTFDDFLDQLGQVRSMGPLDELLKMMPGANKIKGLNNIQIDEKQITHVEAIIKSMTKE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME 349
E+ PE++ S RRKR+A+ SG+T +V++L+ Q M+ MK + G+ +
Sbjct: 387 EKTHPEIINAS--RRKRIAKGSGRTVPEVNRLLKQFEDMKKMMKQMAGMQQ 435
>gi|56419731|ref|YP_147049.1| signal recognition particle GTPase [Geobacillus kaustophilus
HTA426]
gi|297530628|ref|YP_003671903.1| signal recognition particle protein [Geobacillus sp. C56-T3]
gi|319766210|ref|YP_004131711.1| signal recognition particle protein [Geobacillus sp. Y412MC52]
gi|448237352|ref|YP_007401410.1| signal recognition particle protein [Geobacillus sp. GHH01]
gi|56379573|dbj|BAD75481.1| signal recognition particle GTPase [Geobacillus kaustophilus
HTA426]
gi|297253880|gb|ADI27326.1| signal recognition particle protein [Geobacillus sp. C56-T3]
gi|317111076|gb|ADU93568.1| signal recognition particle protein [Geobacillus sp. Y412MC52]
gi|445206194|gb|AGE21659.1| signal recognition particle protein [Geobacillus sp. GHH01]
Length = 446
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 172/336 (51%), Positives = 245/336 (72%), Gaps = 4/336 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAI 59
MGGE S++ AK PTV+++ GLQG GKTT + KLAN L+K + +LVA DVYRPAAI
Sbjct: 87 MGGEQSQIAVAKKPPTVVMMVGLQGAGKTTTTGKLANLLRKRHNRKPLLVAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G P +IAKQ LE AK+++ D V++DTAGRL ID+A+MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGEHANPVEIAKQALERAKEEHYDYVLIDTAGRLHIDEALMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K + P E+ LVVDAMTGQ+A + +F+ ++GITG ILTKLDGD+RGGAALS++ V
Sbjct: 207 KQMKEAVKPDEIFLVVDAMTGQDAVNVAQSFHEQLGITGVILTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PIK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TGAPIKFAGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQAAVDEEKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
A F +DFL+Q V ++G + +I M+PG KI A ++ EK + +EA+I +MT E
Sbjct: 327 ATFTLDDFLEQLGQVRKLGPLDELIKMLPGANKIKGLANIQVDEKQIARVEAIIRSMTKE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
E+ PE++ S R+KR+A+ SG T Q+V++L+ Q
Sbjct: 387 EKTHPEIINAS--RKKRIAKGSGTTVQEVNRLLKQF 420
>gi|452991209|emb|CCQ97464.1| signal recognition particle-like (SRP) GTPase [Clostridium
ultunense Esp]
Length = 446
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 175/342 (51%), Positives = 237/342 (69%), Gaps = 2/342 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG + S+L FA + PTVIL+ GLQG GKTT + KLAN LK Q K +LV DVYRPAAI
Sbjct: 87 MGEKESKLNFASTPPTVILMCGLQGAGKTTTAGKLANNLKIQSKRPLLVVCDVYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++GE+VGVPV+T G + P IAK +E K+ N D +I+DTAGRL ID +MDEL+
Sbjct: 147 QLEVVGERVGVPVFTMGDKNNPVDIAKAAVEHGKRNNNDCIIIDTAGRLHIDDDLMDELE 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+ +NP E+LLVVDAMTGQ+A + TFN + ITG +LTKLDGD+RGGAALS++ V+
Sbjct: 207 GIYNGVNPQEILLVVDAMTGQDAVNVAETFNERLEITGVVLTKLDGDARGGAALSIRAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK VG GE+++ LEPF+PDRMA RILGMGDVLS +E+AQ + ++ A E++KKI S
Sbjct: 267 EKPIKFVGMGEKLDQLEPFHPDRMASRILGMGDVLSLIERAQSSIDEKKALELEKKIKSQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F +DFL+Q + +G + ++GMIPG+ + EK + ++A+I++MTP+ER
Sbjct: 327 QFTLDDFLEQIDQMKNLGPLDELLGMIPGVNSKALKNLDVNEKDIIKIQAIIQSMTPQER 386
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
P ++ RRKR+A SG T Q V++L+ Q + MK
Sbjct: 387 NDPSIIDSK--RRKRIANGSGTTVQDVNKLLKQFRDTKKMMK 426
>gi|375088729|ref|ZP_09735067.1| signal recognition particle protein [Dolosigranulum pigrum ATCC
51524]
gi|374561694|gb|EHR33033.1| signal recognition particle protein [Dolosigranulum pigrum ATCC
51524]
Length = 512
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 179/359 (49%), Positives = 253/359 (70%), Gaps = 14/359 (3%)
Query: 1 MGGEVSELVFAKSRP---TVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRP 56
MGGE +++ A S P TV ++ GLQG GKTT + KL+NYL+K MLVA D+YRP
Sbjct: 87 MGGERQDIITA-SEPGEITVYMMVGLQGAGKTTTAGKLSNYLRKHENMKPMLVAADIYRP 145
Query: 57 AAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMM 116
AAIDQL +G+++ +PV++ G +V P +IA++G++EAK +N +VVI+DTAGRL ID A+M
Sbjct: 146 AAIDQLQQVGKELNIPVFSMGDDVSPVEIARRGVQEAKDENRNVVIIDTAGRLHIDDALM 205
Query: 117 DELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSV 176
EL D+K +NP E+ LVVDAMTGQ+A + TFN ++ I+ ILTKLDGD+RGGAALS+
Sbjct: 206 TELSDIKSEVNPHEIFLVVDAMTGQDAVNVSDTFNKQLDISSVILTKLDGDTRGGAALSI 265
Query: 177 KEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKK 236
+V+ KPIK G GE+++ LEPFYP+RMA RILGMGD+L+ VE+AQ+ M + AEE+ +K
Sbjct: 266 SKVTNKPIKFTGTGEKLDALEPFYPERMANRILGMGDILTLVERAQQEMDDKRAEELAQK 325
Query: 237 IMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEA 294
+ +DFNDF++Q + MG + +I MIPGM + P Q EK L M+A++ +
Sbjct: 326 MAEQTYDFNDFIEQMDQMRNMGPLEDLIKMIPGMSNL-PGMDQFEVDEKDLDRMKAIVLS 384
Query: 295 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 353
MTPEER+ P++L+++ RRKR+A +G+T V++L+ Q Q K LMG M G +
Sbjct: 385 MTPEERKNPDILSQN--RRKRIADGAGRTLLDVNKLITQFKQ----SKELMGDMSSGKM 437
>gi|373464402|ref|ZP_09555941.1| signal recognition particle protein [Lactobacillus kisonensis
F0435]
gi|371762604|gb|EHO51133.1| signal recognition particle protein [Lactobacillus kisonensis
F0435]
Length = 461
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 179/365 (49%), Positives = 255/365 (69%), Gaps = 10/365 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MG + L ++ PTVI+++GLQG GKTT KLA LK +Q +L+A DVYRPAAI
Sbjct: 70 MGEQAVPLNKSEKIPTVIMMSGLQGAGKTTTVGKLALKLKNEQDARPLLIADDVYRPAAI 129
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ VPV+ GT+V P +IAK+GL++A++ + D VI+DTAGRLQID+ +M EL
Sbjct: 130 EQLQTVGQQIDVPVFQLGTDVDPVEIAKRGLQQAQENHNDYVIIDTAGRLQIDEKLMGEL 189
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K++K ++P E+LLV+DAMTGQ A A FN + +TG +LTKLDGD+RGGAALS++ V
Sbjct: 190 KNIKDAVHPDEILLVIDAMTGQNAVATAEGFNKTLDVTGVVLTKLDGDTRGGAALSIRAV 249
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG+GE+M DL+ FYPDRMA RILGMGD+LS +EK Q+ Q+ AEE+Q+KI
Sbjct: 250 TDKPIKFVGQGEKMSDLDVFYPDRMASRILGMGDMLSLIEKTQKEYDQKQAEELQEKIQE 309
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDFL Q + +MG M ++ MIPGM PA V K + ++A+I +MT
Sbjct: 310 NTFDFNDFLDQLSQIQKMGPMDEIMKMIPGMAN-NPALQNVNMDPKDMDHLKAIIYSMTE 368
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
+ER P++L +P RR+R+A+ SG+ Q+V++++ Q Q MK +M + G++ +
Sbjct: 369 QERTDPDVL--NPSRRRRIAKGSGRPIQEVNRMIKQFGQ----MKTMMNKVSKGNMSGME 422
Query: 358 NLEDA 362
N+ +A
Sbjct: 423 NMMNA 427
>gi|347542415|ref|YP_004857052.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-rat-Yit]
gi|346985451|dbj|BAK81126.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-rat-Yit]
Length = 454
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 165/351 (47%), Positives = 247/351 (70%), Gaps = 4/351 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG + S+L + + TVI+L GLQG GKTT++AKL+ Y +K GKS +++A DVYRPAA+
Sbjct: 87 MGNDQSKLNYNSNSTTVIMLVGLQGAGKTTMAAKLSLYCRKSGKSPLMIACDVYRPAAVK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG Q+ +PV++ P I ++GLE+A+ +VVI+DTAGRL ID +MDEL+
Sbjct: 147 QLEVLGNQIDIPVFSIPDSKDPLNIVRKGLEKAESNMNNVVIIDTAGRLHIDDNLMDELR 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + NP+E+L+V+D+M GQE+ + TFN ++ +TG +LTKLDGD+RGG ALS+KEV
Sbjct: 207 EIKEISNPSEILMVIDSMIGQESVNIAETFNEKLDVTGFVLTKLDGDTRGGVALSIKEVI 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GK IK +G GE++ DLE F+PDRMA RILGMGDVLS +EKAQE + QE+A+++ +++ +
Sbjct: 267 GKNIKFIGVGEKISDLEVFHPDRMASRILGMGDVLSLIEKAQESIDQEEAQKLSERMFAN 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEAMIEAMT 296
F+F DF + ++GS S+++ MIPG+G ++ + ++EK L +EA+I +MT
Sbjct: 327 EFNFEDFKSAMHQMKKLGSFSKILQMIPGIGNAMKELKNINLDDSEKELSKIEAIINSMT 386
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
+ER+ P+LL S R+ R+A+ SG T QV++L+ M MK G+
Sbjct: 387 AKERKNPKLLIGSASRKSRIAKGSGSTTAQVNKLIKDFENMSKMMKQFKGM 437
>gi|126698849|ref|YP_001087746.1| signal recognition particle protein [Clostridium difficile 630]
gi|115250286|emb|CAJ68108.1| Signal recognition particle protein [Clostridium difficile 630]
Length = 450
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 172/348 (49%), Positives = 242/348 (69%), Gaps = 4/348 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S+++ + PT++++ GLQG GKTT + KL Y KKQGK +LVA D+YRPAAI
Sbjct: 87 MGDVQSKVMISSKPPTILMMVGLQGAGKTTTAGKLGGYFKKQGKKPLLVACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++GE++ +PV+ G + P IAK GL A K D+VI+DTAGRL ID+ +MDELK
Sbjct: 147 QLQVVGEKLDIPVFNMGDKENPVNIAKAGLNHAIKNANDLVIIDTAGRLHIDEVLMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E+LLVVD+MTGQ+A + +FN +G+ G +LTKLDGD+RGGAALS++ V+
Sbjct: 207 SIKSEVKPHEILLVVDSMTGQDAVNVAESFNEALGVDGVVLTKLDGDTRGGAALSIRAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK +G GE+++D+EPF+PDRMA RILGMGDVLS +EKAQE + E A+E+++KI
Sbjct: 267 QKPIKFMGMGEKLDDIEPFHPDRMASRILGMGDVLSLIEKAQENIDLEKAKELEQKIKKQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPE 298
DF DFL+Q + MG + +++GMIPGMG + V K +K +A+I++MT
Sbjct: 327 ELDFEDFLQQMEQIQNMGPLDKILGMIPGMGNVKDQLGDVDLNGKEMKRTKAIIQSMTTY 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
ER P +L S R+KR+A+ SG + Q V++L+ QL +M+ MK G
Sbjct: 387 ERRNPGVLNAS--RKKRIAKGSGTSVQDVNRLIKQLNEMKKMMKMFAG 432
>gi|333371175|ref|ZP_08463137.1| signal recognition particle protein [Desmospora sp. 8437]
gi|332976619|gb|EGK13460.1| signal recognition particle protein [Desmospora sp. 8437]
Length = 449
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 175/345 (50%), Positives = 248/345 (71%), Gaps = 4/345 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG +L S+P+VIL+ GLQG GKTT + KL +LKKQ + +LVAGDVYRPAAI
Sbjct: 87 MGGTQEKLNLT-SKPSVILMVGLQGAGKTTTTGKLGRFLKKQNRHPLLVAGDVYRPAAIR 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+QV +PV++ G + P +IA G+ +AK++ D V++DTAGRL ID+ MM ELK
Sbjct: 146 QLEVLGDQVELPVFSMGDQESPVRIAVDGVAKAKEEGHDTVLIDTAGRLHIDETMMGELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++ + P E+LLVVDAMTGQ+A + +FN E+G+TG ILTKLDGD+RGGAALSVK V+
Sbjct: 206 AIREKVQPDEILLVVDAMTGQDAVNVAESFNRELGLTGVILTKLDGDTRGGAALSVKSVT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
P+K VG GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + QE A+++++K+ +
Sbjct: 266 DCPVKFVGMGEKVDALEPFHPERMASRILGMGDVLTLIEKAQASVDQEKAKDLERKLRTQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEE 299
F F+DFL+Q V MG + ++GM+PGMG++ + ++ EK L +EA+I +MT EE
Sbjct: 326 QFTFDDFLEQMEQVRNMGPLDELLGMMPGMGQMKNMKNLQVDEKQLTKVEAIIRSMTREE 385
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
++ PE++ RR+R+A SG T Q V++L+ Q M+ MKN
Sbjct: 386 KQNPEIINAG--RRRRIAAGSGTTVQDVNRLIKQFMDMKKMMKNF 428
>gi|430750342|ref|YP_007213250.1| signal recognition particle protein [Thermobacillus composti KWC4]
gi|430734307|gb|AGA58252.1| signal recognition particle protein [Thermobacillus composti KWC4]
Length = 464
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 178/345 (51%), Positives = 245/345 (71%), Gaps = 3/345 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG ++L A PTVI++AGLQG GKTT SAKLA L+K G +L A D+YRPAAI
Sbjct: 88 MGGTQAKLAKAAKPPTVIMMAGLQGAGKTTASAKLALMLQKGGHKPLLAACDIYRPAAIK 147
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG Q+GVPV++ G +V P IA+Q L+ AK + D +I+DTAGRL ID+A+M+EL+
Sbjct: 148 QLQVLGGQIGVPVFSLGDKVNPVDIARQALQHAKDEGRDYLIIDTAGRLHIDEALMEELR 207
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+ + P EVLLVVDAM GQEA + +F+ ++ +TG +LTKLDGD+RGGAA+SVK V+
Sbjct: 208 QIHEGVKPDEVLLVVDAMIGQEAVNVAQSFHEQLELTGIVLTKLDGDTRGGAAISVKAVT 267
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE++E LEPF+PDRMA RILGMGD+LS +EKAQ + E A EM++K+ +A
Sbjct: 268 GCPIKFVGMGEKIEPLEPFHPDRMASRILGMGDMLSLIEKAQAAIDAEKAAEMERKMRAA 327
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEE 299
F F DFL+Q V ++G + +++ M+PGMGK+ + ++ E+ L +EA++++MT EE
Sbjct: 328 EFTFEDFLEQMAQVRKLGPLDQLLEMLPGMGKLKQLKDIQIDERQLARVEAIVKSMTTEE 387
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+ PE+L S RRKR+A SG T V++L+ Q MR MK
Sbjct: 388 KRNPEILNHS--RRKRIAAGSGTTVADVNRLIKQFDDMRRMMKQF 430
>gi|357038757|ref|ZP_09100554.1| signal recognition particle protein [Desulfotomaculum gibsoniae DSM
7213]
gi|355359549|gb|EHG07311.1| signal recognition particle protein [Desulfotomaculum gibsoniae DSM
7213]
Length = 454
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 171/346 (49%), Positives = 246/346 (71%), Gaps = 3/346 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S++ A S PTV+++ GL G GKTT +AKLAN++++QG+ +LVA D+YRPAAI
Sbjct: 87 MGGTRSKIELAPSPPTVVMMVGLHGAGKTTTTAKLANHMRRQGRRPLLVACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG Q+ VPV+ G V P IA+ +E+A+++ D+VI+DTAGRL ID+ +M EL
Sbjct: 147 QLQVLGGQLDVPVFNMGDSVAPPDIARAAVEKARREGNDLVIIDTAGRLHIDEELMTELH 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++ + P E+LLVVD+MTGQ+A + TFN + +TG +LTKLDGD+RGGAALSVK V+
Sbjct: 207 NIVETVGPNEILLVVDSMTGQDAVNVAKTFNERLSLTGVVLTKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE+++ LE F+PDRMA RILGMGD+L+ +EKAQ QE E++ K+I S
Sbjct: 267 GCPIKFVGMGEKLDALEDFHPDRMADRILGMGDMLTLIEKAQANFDQEQVEKLNKRIRSM 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA-EKSLKIMEAMIEAMTPEE 299
F +DF++Q V +MG + +++GMIPG+G + + E +K L +EA+I +MTP E
Sbjct: 327 EFTLDDFVQQLNQVKKMGPIDQILGMIPGLGGVKKLKDLEVDDKDLVFVEAIINSMTPWE 386
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM 345
R+ P+ + S RR+R+A+ SG + Q+V++L+ Q Q R M+ LM
Sbjct: 387 RQHPQEINGS--RRRRIARGSGTSVQEVNRLLKQFEQTRKMMRQLM 430
>gi|34763935|ref|ZP_00144833.1| SIGNAL RECOGNITION PARTICLE, SUBUNIT FFH/SRP54 [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
gi|27886292|gb|EAA23570.1| SIGNAL RECOGNITION PARTICLE, SUBUNIT FFH/SRP54 [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
Length = 444
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 181/362 (50%), Positives = 252/362 (69%), Gaps = 12/362 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI
Sbjct: 86 LGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL ID+ +M+ELK
Sbjct: 146 QLQVLGQQIGVDVYSEEDTKDVVGIATRAIEKAKEINATYMIVDTAGRLHIDETLMEELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++KR + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V
Sbjct: 206 ELKRAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVV 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE++ D+E F+PDR+ ILGMGDV+S VEKAQEV+ + +A+ +++KI S
Sbjct: 266 GKPIKFIGVGEKLNDIEIFHPDRLVSGILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FD NDFLKQ +T+ R+GS+ ++ +IPG+ KI + AEK +K +EA+I++MT EER
Sbjct: 326 KFDLNDFLKQLQTIKRLGSLGGILKLIPGIPKID--DLAPAEKEMKKVEAIIQSMTKEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMGVMEGGS 352
+KP++L S R+ R+A+ SG V++L+ Q QM+ MK N+ + +GG
Sbjct: 384 KKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNIGAMGKGGK 441
Query: 353 LP 354
P
Sbjct: 442 FP 443
>gi|163847609|ref|YP_001635653.1| signal recognition particle protein [Chloroflexus aurantiacus
J-10-fl]
gi|222525465|ref|YP_002569936.1| signal recognition particle protein [Chloroflexus sp. Y-400-fl]
gi|163668898|gb|ABY35264.1| signal recognition particle protein [Chloroflexus aurantiacus
J-10-fl]
gi|222449344|gb|ACM53610.1| signal recognition particle protein [Chloroflexus sp. Y-400-fl]
Length = 450
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 175/346 (50%), Positives = 248/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+G E L A+ PTVI+L GLQG GKTT++AKLA +L+K+GK +LVA DVYRPAAI
Sbjct: 86 LGTENVPLQEARPGPTVIMLVGLQGTGKTTLAAKLALHLRKKGKRVLLVAADVYRPAAIT 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LG Q+ +PVY+ GT+ P IA+ LE A+K+ +VVI+DTAGRLQID+ +M EL+
Sbjct: 146 QLQALGRQLNIPVYSEGTQASPPDIAEHALEHARKELFNVVIIDTAGRLQIDEPLMQELE 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++ ++P E LLVVDAMTGQEA + TFN + +TG ++TK+DGD+RGGAALSV+ V+
Sbjct: 206 QIENRVHPIERLLVVDAMTGQEAVRVAETFNQRVKLTGVVMTKMDGDARGGAALSVRAVT 265
Query: 181 GKPIKLVGRGERME--DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIM 238
G PIK + GE+++ LE F+PDR+A RILGMGDVLS +E+A+++ E A++MQK++
Sbjct: 266 GVPIKFLSTGEKVDGNTLEVFHPDRLASRILGMGDVLSLIERAEQLYDAEQAKKMQKRLS 325
Query: 239 SANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDF DFL + ++G + ++I MIPG+ ++ + E+ +K +EA+I +MTPE
Sbjct: 326 KGEFDFEDFLNSLHQMRKLGPLQQIIAMIPGLNQLARNEELLDERHVKRVEAIIYSMTPE 385
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER +PE++ S RR+R+A+ SG + Q+VSQLV Q QM+ MK L
Sbjct: 386 ERRRPEIIKGS--RRERIARGSGTSVQEVSQLVKQFQQMQRMMKQL 429
>gi|255100269|ref|ZP_05329246.1| signal recognition particle protein [Clostridium difficile
QCD-63q42]
gi|255306209|ref|ZP_05350381.1| signal recognition particle protein [Clostridium difficile ATCC
43255]
gi|423082359|ref|ZP_17070951.1| signal recognition particle protein [Clostridium difficile
002-P50-2011]
gi|423087751|ref|ZP_17076137.1| signal recognition particle protein [Clostridium difficile
050-P50-2011]
gi|357544065|gb|EHJ26071.1| signal recognition particle protein [Clostridium difficile
050-P50-2011]
gi|357548685|gb|EHJ30545.1| signal recognition particle protein [Clostridium difficile
002-P50-2011]
Length = 450
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 172/348 (49%), Positives = 242/348 (69%), Gaps = 4/348 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S+++ + PT++++ GLQG GKTT + KL Y KKQGK +LVA D+YRPAAI
Sbjct: 87 MGDVQSKVMISSKPPTILMMVGLQGAGKTTTAGKLGGYFKKQGKKPLLVACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++GE++ +PV+ G + P IAK GL A K D+VI+DTAGRL ID+ +MDELK
Sbjct: 147 QLQVVGEKLDIPVFNMGDKENPVNIAKAGLSHAIKNANDLVIIDTAGRLHIDEVLMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E+LLVVD+MTGQ+A + +FN +G+ G +LTKLDGD+RGGAALS++ V+
Sbjct: 207 SIKSEVKPHEILLVVDSMTGQDAVNVAESFNEALGVDGVVLTKLDGDTRGGAALSIRAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK +G GE+++D+EPF+PDRMA RILGMGDVLS +EKAQE + E A+E+++KI
Sbjct: 267 QKPIKFMGMGEKLDDIEPFHPDRMASRILGMGDVLSLIEKAQENIDLEKAKELEQKIKKQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPE 298
DF DFL+Q + MG + +++GMIPGMG + V K +K +A+I++MT
Sbjct: 327 ELDFEDFLQQMEQIQNMGPLDKILGMIPGMGNVKDQLGDVDLNGKEMKRTKAIIQSMTTY 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
ER P +L S R+KR+A+ SG + Q V++L+ QL +M+ MK G
Sbjct: 387 ERRNPGVLNAS--RKKRIAKGSGTSVQDVNRLIKQLNEMKKMMKMFAG 432
>gi|255655263|ref|ZP_05400672.1| signal recognition particle protein [Clostridium difficile
QCD-23m63]
Length = 452
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 176/368 (47%), Positives = 249/368 (67%), Gaps = 11/368 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S+++ + PT++++ GLQG GKTT + KL Y KKQGK +LVA D+YRPAAI
Sbjct: 87 MGDVQSKVMISSKPPTILMMVGLQGAGKTTTAGKLGGYFKKQGKKPLLVACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++GE++ +PV+ G + P IAK GL A K D+VI+DTAGRL ID+ +MDELK
Sbjct: 147 QLQVVGEKLDIPVFNMGDKENPVNIAKAGLSHAIKNANDLVIIDTAGRLHIDEVLMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E+LLVVD+MTGQ+A + +FN +G+ G +LTKLDGD+RGGAALS++ V+
Sbjct: 207 SIKSEVKPHEILLVVDSMTGQDAVNVAESFNEALGVDGVVLTKLDGDTRGGAALSIRAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK +G GE+++D+EPF+PDRMA RILGMGDVLS +EKAQE + E A+E+++KI
Sbjct: 267 QKPIKFMGMGEKLDDIEPFHPDRMASRILGMGDVLSLIEKAQENIDLEKAKELEQKIKKQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPE 298
DF DFL+Q + MG + +++GMIPGMG + V K +K +A+I++MT
Sbjct: 327 ELDFEDFLQQMEQIQNMGPLDKILGMIPGMGNVKDQLGDVDLNGKEMKRTKAIIQSMTTY 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG-------G 351
ER P +L S R+KR+A+ SG + Q V++L+ QL +M+ MK G + G
Sbjct: 387 ERRNPGVLNAS--RKKRIARGSGTSVQDVNRLIKQLNEMKKMMKMFAGSQKSMKKRGGLG 444
Query: 352 SLPALSNL 359
LP L+ +
Sbjct: 445 GLPFLNKI 452
>gi|404370917|ref|ZP_10976232.1| signal recognition particle protein [Clostridium sp. 7_2_43FAA]
gi|226912962|gb|EEH98163.1| signal recognition particle protein [Clostridium sp. 7_2_43FAA]
Length = 450
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 168/349 (48%), Positives = 248/349 (71%), Gaps = 9/349 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S+L F PTVI++ GLQG GKTT+S KLA L+KQ K +LVA D+YRPAAI
Sbjct: 87 MGGSESKLNFNSVGPTVIMMVGLQGAGKTTMSGKLALQLRKQNKKPLLVACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G+Q+ +PV+ G +V P IAK G+ A++ +V+I+DTAGRL ID+ +M+ELK
Sbjct: 147 QLEVVGKQIDIPVFQMGDKVNPVDIAKAGIAHARENGNNVIIIDTAGRLHIDENLMEELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K +NP E+LLVVD+MTGQ+A + +FN + ++G ILTKLDGD+RGGAALS++ V+
Sbjct: 207 SIKEEVNPQEILLVVDSMTGQDAVNVAESFNNSLDVSGVILTKLDGDTRGGAALSIRSVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK +G GE+M D E FYPDRM+ RILGMGDVLS +EKAQ+ ++A+E+ K++
Sbjct: 267 EKPIKFIGVGEKMSDFEVFYPDRMSSRILGMGDVLSLIEKAQQAFDDKEAQELSSKMLEN 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVRE-----AEKSLKIMEAMIEAM 295
+F + D+L + ++GS+S+++ M+PG+ P +V++ EK L ++A+I +M
Sbjct: 327 DFTYEDYLTAMEQMKKLGSLSKIMEMVPGI----PKEVKDIDFDAGEKQLGRVKAIIHSM 382
Query: 296 TPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
TP+ER P+L+A S R+KR+A+ SG + Q+V++L+ MR +MK +
Sbjct: 383 TPKERRNPKLIAGSSSRKKRIAKGSGTSLQEVNKLIKGFDMMRKQMKQM 431
>gi|374708674|ref|ZP_09713108.1| signal recognition particle protein [Sporolactobacillus inulinus
CASD]
Length = 447
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 173/352 (49%), Positives = 247/352 (70%), Gaps = 4/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQG-KSCMLVAGDVYRPAAI 59
MGGE ++L F+ PTV+L GLQG GKTT +AKLAN+++K K +++A D+YRPAAI
Sbjct: 87 MGGEQTKLNFSLKPPTVLLFVGLQGAGKTTSAAKLANHIRKNNNKKPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG Q+ +PV++ G +V P I +QG+++A+ + D+VI+DTAGRL ID+ +M+EL
Sbjct: 147 KQLQTLGSQLNIPVFSLGDQVNPVDIVRQGMDQARADHNDLVIIDTAGRLHIDEGLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K V +P EV LVVDAMTGQ+A + FN + ITG I+TKLDGD+RGGAALS++ V
Sbjct: 207 EQIKEVSHPDEVFLVVDAMTGQDAVNVARAFNDRLDITGVIMTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG GE+M+ LEPF+PDRMA RILGMGDVLS +EKAQ + +E A +MQ+K++S
Sbjct: 267 TGKPIKFVGMGEKMDALEPFHPDRMASRILGMGDVLSLIEKAQATIDEEKARDMQQKLLS 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+F +DFL+Q V MG + ++ M+PG K + ++ EK + EA+I +MT
Sbjct: 327 VSFTLDDFLEQIGQVRTMGPLEDLLAMMPGANKFKGMKNMQIDEKKIDQTEAIIRSMTSH 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
E+ +PE++ S R+KR+A SG + V++L+ Q M+ MK MG +G
Sbjct: 387 EKTEPEIINAS--RKKRIALGSGTSVADVNRLLKQFKDMKKMMKQFMGKAKG 436
>gi|404418469|ref|ZP_11000236.1| signal recognition particle protein [Staphylococcus arlettae
CVD059]
gi|403489062|gb|EJY94640.1| signal recognition particle protein [Staphylococcus arlettae
CVD059]
Length = 454
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 170/346 (49%), Positives = 251/346 (72%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S + A PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI
Sbjct: 87 MGGENSTITMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ VPVY+ G +VKP +I + L+ AK++++D VI+DTAGRL ID+A+MDEL
Sbjct: 147 DQLQTVGKQLDVPVYSEGDQVKPQEIVENALQHAKEEHLDFVIIDTAGRLHIDEALMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E++LVVDAMTGQ+A + +F+ ++ ++G LTKLDGD+RGGAALS++ V
Sbjct: 207 QDVKTIAKPNEIMLVVDAMTGQDAVNVAQSFDEQLEVSGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LEPF+P+RMA RILGMGDVLS +EKAQ+ + Q+ A+++++K+ S
Sbjct: 267 TQKPIKFVGMSEKLDGLEPFHPERMASRILGMGDVLSLIEKAQQDVDQDKAKDLEQKMRS 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ + +EK + ++A+I++MTP
Sbjct: 327 SSFTLDDFLEQLDQVKSLGPLDDIMKMIPGMNKMKGLDNLNMSEKQIDHIKAIIQSMTPN 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P L S R+KR+A+ SG++ Q+V++L+ Q +M+ MK
Sbjct: 387 ERNDPNTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNEMKKMMKQF 430
>gi|296451248|ref|ZP_06892988.1| signal recognition particle protein [Clostridium difficile NAP08]
gi|296880400|ref|ZP_06904363.1| signal recognition particle protein [Clostridium difficile NAP07]
gi|296259854|gb|EFH06709.1| signal recognition particle protein [Clostridium difficile NAP08]
gi|296428641|gb|EFH14525.1| signal recognition particle protein [Clostridium difficile NAP07]
Length = 450
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 172/348 (49%), Positives = 242/348 (69%), Gaps = 4/348 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S+++ + PT++++ GLQG GKTT + KL Y KKQGK +LVA D+YRPAAI
Sbjct: 87 MGDVQSKVMISSKPPTILMMVGLQGAGKTTTAGKLGGYFKKQGKKPLLVACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++GE++ +PV+ G + P IAK GL A K D+VI+DTAGRL ID+ +MDELK
Sbjct: 147 QLQVVGEKLDIPVFNMGDKENPVNIAKAGLSHAIKNANDLVIIDTAGRLHIDEVLMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E+LLVVD+MTGQ+A + +FN +G+ G +LTKLDGD+RGGAALS++ V+
Sbjct: 207 SIKSEVKPHEILLVVDSMTGQDAVNVAESFNEALGVDGVVLTKLDGDTRGGAALSIRAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK +G GE+++D+EPF+PDRMA RILGMGDVLS +EKAQE + E A+E+++KI
Sbjct: 267 QKPIKFMGMGEKLDDIEPFHPDRMASRILGMGDVLSLIEKAQENIDLEKAKELEQKIKKQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPE 298
DF DFL+Q + MG + +++GMIPGMG + V K +K +A+I++MT
Sbjct: 327 ELDFEDFLQQMEQIQNMGPLDKILGMIPGMGNVKDQLGDVDLNGKEMKRTKAIIQSMTTY 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
ER P +L S R+KR+A+ SG + Q V++L+ QL +M+ MK G
Sbjct: 387 ERRNPGVLNAS--RKKRIARGSGTSVQDVNRLIKQLNEMKKMMKMFAG 432
>gi|170758261|ref|YP_001787761.1| signal recognition particle protein [Clostridium botulinum A3 str.
Loch Maree]
gi|169405250|gb|ACA53661.1| signal recognition particle protein [Clostridium botulinum A3 str.
Loch Maree]
Length = 449
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 169/338 (50%), Positives = 246/338 (72%), Gaps = 3/338 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S L + S TVI+L GLQG GKTT++ KLA +L+K+ K +LVA DVYRPAAI
Sbjct: 87 MGSTESTLNSSTSGLTVIMLVGLQGAGKTTMAGKLALHLRKRNKRPLLVACDVYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G+Q+ +PV+T G ++ P I+K +E AK +VVI+DTAGRL ID+ +MDEL
Sbjct: 147 QLQVVGKQIDIPVFTMGDKLNPVDISKAAIEHAKNNKNNVVIIDTAGRLHIDEELMDELH 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K +NP+E+LLVVDAMTGQ+A + FN ++ I+G ILTKLDGD+RGGAALS+K ++
Sbjct: 207 NIKGEVNPSEILLVVDAMTGQDAVNVANNFNDKLDISGVILTKLDGDTRGGAALSIKSMT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GE+M DLE FYPDRMA RILGMGDVLS +EKAQ+ + +E A+E+ +++++
Sbjct: 267 GKPIKFVGLGEKMNDLEVFYPDRMASRILGMGDVLSLIEKAQQSIDEEKAKEIGERMLNQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPE 298
F+F DFL+ + + ++G +++++ M+PGM ++ + +EK +K EA+I +MT +
Sbjct: 327 EFNFEDFLESMQQMKKLGPINKLLEMMPGMNSKELKNIDLSSSEKEMKKTEAIISSMTIK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 336
ER P L++ SP R++R+A+ SG Q V++L+ FQ
Sbjct: 387 ERRNPSLISSSPSRKRRIAKGSGTNVQNVNKLLKD-FQ 423
>gi|288553090|ref|YP_003425025.1| signal recognition particle protein [Bacillus pseudofirmus OF4]
gi|288544250|gb|ADC48133.1| signal recognition particle [Bacillus pseudofirmus OF4]
Length = 452
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 172/346 (49%), Positives = 249/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTV+++ GLQG GKTT +AKLAN+L KKQ ++ MLVA D+YRPAAI
Sbjct: 87 MGGEQSKIAVANKPPTVVMMVGLQGAGKTTTTAKLANHLRKKQNRTPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +M EL
Sbjct: 147 KQLETLGKQLNMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMGEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++VK + P E+LLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAA+SVK V
Sbjct: 207 QEVKEIAKPDEILLVVDAMTGQDAVNVAESFNEQLDVTGVVLTKLDGDTRGGAAISVKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ LEPFYPDRMA RILGMGD+L+ +EKAQ + +E A E++KK+ +
Sbjct: 267 TNTPIKFAGMGEKIDQLEPFYPDRMASRILGMGDMLTLIEKAQSNVDEEKARELEKKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+F F+DFL+Q V MG + ++ M+PGM K + ++ +K L +EA++ +MT
Sbjct: 327 MDFTFDDFLEQLDQVKSMGPLDEILNMMPGMNKAKGLKDLKVDDKQLVRVEAIVRSMTKA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E++ P L+ S RR+R+A+ SG T Q V++L+ Q M+ MK +
Sbjct: 387 EKQDPSLMNAS--RRRRIAKGSGTTIQDVNRLLKQFEDMKKMMKQM 430
>gi|284039605|ref|YP_003389535.1| signal recognition particle protein [Spirosoma linguale DSM 74]
gi|283818898|gb|ADB40736.1| signal recognition particle protein [Spirosoma linguale DSM 74]
Length = 439
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 177/353 (50%), Positives = 241/353 (68%), Gaps = 4/353 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGE + K P +IL+AGLQG GKTT S KLA+YLKKQG++ +LVA D+YRPAAID
Sbjct: 86 MGGEAQNINI-KGDPAIILIAGLQGSGKTTFSGKLASYLKKQGRNVLLVAADIYRPAAID 144
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQVGV VY QIA+ + A+K +VIVDTAGRL +D+AMM E++
Sbjct: 145 QLKVLGEQVGVEVYAEPENKNAVQIAQNAIALARKTGKKIVIVDTAGRLAVDEAMMQEIE 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+KR + P+E L VVD+MTGQ+A TFN + G +LTKLDGD+RGGAALS+K V
Sbjct: 205 ALKRAIAPSETLFVVDSMTGQDAVNTAKTFNERLNFDGVVLTKLDGDARGGAALSIKTVV 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK + GE+ME L+ FYPDRMA RILGMGDV+S VE+AQ+ +++A+ + K+
Sbjct: 265 NKPIKFISTGEKMEALDVFYPDRMASRILGMGDVISLVERAQQAFDEDEAKRINAKMRKN 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF+DFL Q + + +MG++ ++GMIPGMGK+ + S K +EA+I +MTP+ER
Sbjct: 325 QFDFDDFLSQLQQIKKMGNVKDLLGMIPGMGKMIK-DLDIDNDSFKPIEAIISSMTPKER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 353
+P+++ S R+KR+A SG + QV+ L+ Q +MR MK + + G L
Sbjct: 384 SRPDIIDGS--RKKRIATGSGTSITQVNNLLKQFDEMRKMMKKMNTMQSSGKL 434
>gi|375011584|ref|YP_004988572.1| signal recognition particle protein [Owenweeksia hongkongensis DSM
17368]
gi|359347508|gb|AEV31927.1| signal recognition particle protein [Owenweeksia hongkongensis DSM
17368]
Length = 449
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 181/338 (53%), Positives = 238/338 (70%), Gaps = 5/338 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG V+E+ KS P+VIL+AGLQG GKTT S KLAN+LK K+ K +LVA DVYRPAAI
Sbjct: 86 MGGSVAEMDL-KSSPSVILMAGLQGSGKTTHSGKLANFLKRKKTKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL ++GEQ+GV VY+ P IA + AK +VVIVDTAGRL ID+AMM E+
Sbjct: 145 NQLKVVGEQIGVEVYSEEGNNNPVSIATNAVAHAKANGFNVVIVDTAGRLAIDQAMMTEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DV + P E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAAL+++ V
Sbjct: 205 RDVHAAIKPDETLFVVDSMTGQDAVNTAKAFNDVLDYEGVILTKLDGDTRGGAALTIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+M+ L+ FYP+RMA RILGMGDV+S VE+AQE +++A +QKKI S
Sbjct: 265 VEKPIKFIGTGEKMDALDVFYPERMADRILGMGDVVSLVERAQEQFDEDEARRVQKKIAS 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + + +MG++ ++GMIPGMGK+ + + + K +EA+I +MTP E
Sbjct: 325 NKFDFNDFLGQIKQIKKMGNVKDLMGMIPGMGKMMK-NIDIDDDAFKGVEAIIHSMTPAE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQM 337
RE P+L+ S RR+R+A+ SGKT Q V+QL+ Q M
Sbjct: 384 REDPKLINGS--RRQRIAKGSGKTIQDVNQLLKQFADM 419
>gi|383764739|ref|YP_005443721.1| signal recognition particle protein [Caldilinea aerophila DSM 14535
= NBRC 104270]
gi|381385007|dbj|BAM01824.1| signal recognition particle protein [Caldilinea aerophila DSM 14535
= NBRC 104270]
Length = 463
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 180/338 (53%), Positives = 245/338 (72%), Gaps = 10/338 (2%)
Query: 15 PTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 74
P VI+L GLQG GKTT++AKLA LKK G+ +LVA D+YRPAAI QL +LG Q+ VPVY
Sbjct: 99 PHVIMLVGLQGAGKTTMAAKLALRLKKNGQRPLLVAADIYRPAAIKQLEVLGAQIEVPVY 158
Query: 75 TAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLV 134
+AGT+ S IAK L+ A++K +VVI+DTAGRLQID+A+M EL+ V+ V P+++LLV
Sbjct: 159 SAGTQTPASTIAKDALKLAREKAYNVVIIDTAGRLQIDEALMQELEQVRLVTRPSDILLV 218
Query: 135 VDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERME 194
VDAMTGQEA + FN + +TG I+TK+DGD+RGGAALSV++V+G PIK +G GE++
Sbjct: 219 VDAMTGQEAVNVAEGFNARVPLTGLIMTKIDGDARGGAALSVRQVTGVPIKFLGTGEKLP 278
Query: 195 DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTV 254
DLEPF P+R+AGRILGMGDVL+ +E+AQE + + A M+K+++ FDF DFL+Q + V
Sbjct: 279 DLEPFDPERLAGRILGMGDVLTLIERAQENISADAAAAMEKRLVEGQFDFEDFLEQLKQV 338
Query: 255 ARMGSMSRVIGMIPGMGK----ITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESP 310
R+G ++ ++ MIPG+ + I P A+ SLK EA+I +MT +ER P++L S
Sbjct: 339 KRLGPLTEILSMIPGLNRFAKEIDPTM---AQDSLKKTEAIINSMTIQERRNPDILNAS- 394
Query: 311 VRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 348
RR+R+A SG T Q V+ LV Q +M+ MK L GVM
Sbjct: 395 -RRRRIAAGSGTTVQDVNTLVKQFREMQKMMKQL-GVM 430
>gi|167769126|ref|ZP_02441179.1| hypothetical protein ANACOL_00449 [Anaerotruncus colihominis DSM
17241]
gi|167668766|gb|EDS12896.1| signal recognition particle protein [Anaerotruncus colihominis DSM
17241]
Length = 459
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 175/339 (51%), Positives = 245/339 (72%), Gaps = 4/339 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG + L F+ PT++++ GLQG GKTT SAKLA + ++QGK +LVA DVYRPAAI+
Sbjct: 87 MGETGARLNFSSRPPTIVMMCGLQGSGKTTHSAKLALHFREQGKRPLLVACDVYRPAAIE 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++GE+ GVPV+ G + P +IA++ + AK D+VI+DTAGRL ID+A+MDELK
Sbjct: 147 QLKVVGEKAGVPVFDMG-QGDPVEIARRAVMHAKDHGNDLVILDTAGRLHIDEALMDELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++ ++P E+LLVVDAM GQ+A + + F+ +GI+G ILTKLDGD+RGGAALSV+ V+
Sbjct: 206 RIRDEVSPQEILLVVDAMVGQDAVNVASAFDEALGISGVILTKLDGDTRGGAALSVRAVT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKP+K VG GE++ DLEPFYPDRMA RILGMGDVL+ +EKAQ + A EM +K+
Sbjct: 266 GKPVKFVGTGEKLGDLEPFYPDRMASRILGMGDVLTLIEKAQSDFDAKQAAEMAQKMRQN 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F+FND L Q + + +MG +S VI M+PG+ GK+ Q + E+ L+ EA+I++MTP E
Sbjct: 326 TFNFNDMLAQMQQLKKMGPLSSVINMLPGVAGKLDDEQAEQGERELRRTEAIIQSMTPAE 385
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 338
REKP L+ +P R++R+A SG + V++L+ Q QM+
Sbjct: 386 REKPSLI--NPARKRRIAAGSGTRVEDVNRLLRQNEQMQ 422
>gi|402308286|ref|ZP_10827295.1| signal recognition particle protein [Prevotella sp. MSX73]
gi|400375730|gb|EJP28625.1| signal recognition particle protein [Prevotella sp. MSX73]
Length = 447
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 182/347 (52%), Positives = 240/347 (69%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE + LV K+RP +IL++GLQG GKTT S KLAN LK K+ K+ +LVA DVYRPAAI
Sbjct: 86 MGGEDAPLVL-KNRPAIILMSGLQGSGKTTFSGKLANMLKTKEHKNPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ++GEQVGVPVY IA L+EAK KN DVVI+DTAGRL +D+ MM E+
Sbjct: 145 DQLKVVGEQVGVPVYAEPDNKDVIAIAANALKEAKAKNYDVVIIDTAGRLAVDEQMMTEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++K+ +NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 SNLKQAVNPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A +QKKI
Sbjct: 265 VTKPIKFIGTGEKMEAIDVFHPARMADRILGMGDVVSLVERAQEQFDEEEARRLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK V + + K +E++I++MTP+E
Sbjct: 325 NQFDFNDFLNQIEQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIESIIKSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R PE+L S RR+R+A+ SG Q V++L+ Q Q R MK + G
Sbjct: 384 RSNPEILNSS--RRQRIAKGSGTNIQDVNRLIKQFDQTRKMMKMVTG 428
>gi|423090839|ref|ZP_17079125.1| signal recognition particle protein [Clostridium difficile
70-100-2010]
gi|357555954|gb|EHJ37576.1| signal recognition particle protein [Clostridium difficile
70-100-2010]
Length = 450
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 172/348 (49%), Positives = 242/348 (69%), Gaps = 4/348 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S+++ + PT++++ GLQG GKTT + KL Y KKQGK +LVA D+YRPAAI
Sbjct: 87 MGDVQSKVMISSKPPTILMMVGLQGAGKTTTAGKLGGYFKKQGKKPLLVACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++GE++ +PV+ G + P IAK GL A K D+VI+DTAGRL ID+ +MDELK
Sbjct: 147 QLQVVGEKLDIPVFNMGDKENPINIAKAGLSHAIKNANDLVIIDTAGRLHIDEVLMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E+LLVVD+MTGQ+A + +FN +G+ G +LTKLDGD+RGGAALS++ V+
Sbjct: 207 SIKSEVKPHEILLVVDSMTGQDAVNVAESFNEALGVDGVVLTKLDGDTRGGAALSIRAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK +G GE+++D+EPF+PDRMA RILGMGDVLS +EKAQE + E A+E+++KI
Sbjct: 267 QKPIKFMGMGEKLDDIEPFHPDRMASRILGMGDVLSLIEKAQENIDLEKAKELEQKIKKQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPE 298
DF DFL+Q + MG + +++GMIPGMG + V K +K +A+I++MT
Sbjct: 327 ELDFEDFLQQMEQIQNMGPLDKILGMIPGMGNVKDQLGDVDLNGKEMKRTKAIIQSMTTY 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
ER P +L S R+KR+A+ SG + Q V++L+ QL +M+ MK G
Sbjct: 387 ERRNPGVLNAS--RKKRIAKGSGTSVQDVNRLIKQLNEMKKMMKMFAG 432
>gi|223995257|ref|XP_002287312.1| signal recognition particle 54 kDA subunit [Thalassiosira
pseudonana CCMP1335]
gi|220976428|gb|EED94755.1| signal recognition particle 54 kDA subunit [Thalassiosira
pseudonana CCMP1335]
Length = 486
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 179/325 (55%), Positives = 233/325 (71%), Gaps = 9/325 (2%)
Query: 1 MGGEVSE----LVFAKS----RPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGD 52
MGGE +E A S P VILLAGLQG GKTT + KLA L K+ + +LVA D
Sbjct: 86 MGGEANESNTMATLAHSSVANEPAVILLAGLQGAGKTTAAGKLAFRLPKRNRKVLLVAAD 145
Query: 53 VYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQID 112
VYRPAAI+QL ILG+Q+GV V++ G + P+ IAK+ +E+AK++ D V+VDTAGR +D
Sbjct: 146 VYRPAAIEQLQILGKQIGVEVFSMGVDADPADIAKEAVEKAKREGFDTVVVDTAGRQVVD 205
Query: 113 KAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGA 172
+ +M+EL+ VK+ + P E LLVVDAMTGQ AA+L +F+ +GI+GAILTKLDGDSRGGA
Sbjct: 206 EELMEELRRVKKTVEPDETLLVVDAMTGQAAASLTASFDAAVGISGAILTKLDGDSRGGA 265
Query: 173 ALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEE 232
A+S++ VSGKPIK VG GE+ DLEPFYPDRMA RILGMGDV+S VEKA + DA +
Sbjct: 266 AVSIRGVSGKPIKFVGVGEKTNDLEPFYPDRMASRILGMGDVISLVEKASMEVSDADAAK 325
Query: 233 MQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK-ITPAQVREAEKSLKIMEAM 291
MQ+K+ A FDF+DF+ Q+R V++MGSM+ V M+PGMG I +Q+R+ E+ +K EAM
Sbjct: 326 MQEKMAKAEFDFDDFMTQSRMVSKMGSMAGVAKMLPGMGNMIDSSQMRQVEERIKRSEAM 385
Query: 292 IEAMTPEEREKPELLAESPVRRKRV 316
I +M +ER P LL R R+
Sbjct: 386 ICSMNKKERANPGLLLTDKSARSRL 410
>gi|375308192|ref|ZP_09773479.1| signal recognition particle protein [Paenibacillus sp. Aloe-11]
gi|375080523|gb|EHS58744.1| signal recognition particle protein [Paenibacillus sp. Aloe-11]
Length = 458
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 175/363 (48%), Positives = 251/363 (69%), Gaps = 5/363 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG ++L A PTVI++ GLQG GKTT S KLA L+KQ +LVAGD+YRPAAI
Sbjct: 87 MGGSQAKLAKANKPPTVIMMVGLQGAGKTTTSGKLAKLLQKQNHRPLLVAGDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ILGEQ+ PV+T G + P +IAKQGL+ AK D VI+DTAGRL +D+ +M+EL+
Sbjct: 147 QLQILGEQINAPVFTLGDQTSPVEIAKQGLQHAKDNGNDYVIIDTAGRLHVDEELMEELR 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+ + P EVLLVVD+MTGQ+A + FN + +TG +LTKLDGD+RGGAALSVK V+
Sbjct: 207 QIHANVKPDEVLLVVDSMTGQDAVNVAEHFNSSLELTGVVLTKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK GE+++ +EPF+P+RMA RILGMGD+LS +EKAQ + + A+EM++K+ +A
Sbjct: 267 GCPIKFATLGEKLDAMEPFHPERMASRILGMGDMLSLIEKAQSNIDADKAKEMERKMRNA 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEE 299
F F DFL+Q V ++G + +++ MIPGMG + + ++ +K + +EA++ +MT +E
Sbjct: 327 EFTFEDFLEQMDQVKKLGPIDQILDMIPGMGNMKQMKDIKVDDKQMGRIEAIVHSMTTQE 386
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM--EGGSLPALS 357
++ P+++ S RRKR+A SG + +V++L+ Q +MR MK +M +GG AL
Sbjct: 387 KQNPDMINHS--RRKRIAVGSGTSLAEVNRLIKQFDEMRRMMKQFSDMMGPKGGKNKALK 444
Query: 358 NLE 360
L+
Sbjct: 445 QLK 447
>gi|313888484|ref|ZP_07822151.1| signal recognition particle protein [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312845513|gb|EFR32907.1| signal recognition particle protein [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 445
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 175/344 (50%), Positives = 238/344 (69%), Gaps = 3/344 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG ++ F+K +PTVI++ GLQG GKTT S KLAN LKK GK +LVA DVYRPAAI
Sbjct: 87 MGTSEVKIDFSK-KPTVIMMCGLQGAGKTTTSGKLANKLKKDGKRPLLVACDVYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++GE V PV+T G ++ P I+K LE AKK DVVI+DTAGRL ID+A+M EL+
Sbjct: 146 QLQVVGESVDTPVFTMGDKISPVDISKAALEHAKKNGNDVVIIDTAGRLHIDEALMKELQ 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+ L P+EVLLV+DAMTGQ+A + TF+ + +TG ILTKLDGD+RGGAALS++ V+
Sbjct: 206 DIHEALEPSEVLLVLDAMTGQDAVNVADTFDDMLKLTGVILTKLDGDARGGAALSIRSVT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
PIK + GE+M+++E F+PDRMA RILGMGDVLS +EKAQ + + A+E+++K+ +
Sbjct: 266 DVPIKFIASGEKMDNIEVFHPDRMASRILGMGDVLSLIEKAQSAVDDKKAKELEEKLRKS 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F F DFL Q + + MG + +IGMIPGM + + +EA+I +MT +ER
Sbjct: 326 TFTFEDFLDQMQQMKNMGPLEDIIGMIPGMNSKALKGISLPDNEFAKVEAIILSMTKKER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+KPE++ S RRKR+A+ SG + V++L+ Q MR MK
Sbjct: 386 QKPEIIDSS--RRKRIAKGSGTSPADVNKLIKQFKDMRKMMKQF 427
>gi|212693973|ref|ZP_03302101.1| hypothetical protein BACDOR_03497 [Bacteroides dorei DSM 17855]
gi|237710361|ref|ZP_04540842.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|345516836|ref|ZP_08796322.1| signal recognition particle protein [Bacteroides dorei 5_1_36/D4]
gi|423239666|ref|ZP_17220782.1| signal recognition particle protein [Bacteroides dorei CL03T12C01]
gi|212663505|gb|EEB24079.1| signal recognition particle protein [Bacteroides dorei DSM 17855]
gi|229437723|gb|EEO47800.1| signal recognition particle protein [Bacteroides dorei 5_1_36/D4]
gi|229455823|gb|EEO61544.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|392645706|gb|EIY39429.1| signal recognition particle protein [Bacteroides dorei CL03T12C01]
Length = 440
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 180/357 (50%), Positives = 244/357 (68%), Gaps = 5/357 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE +ELV + RP VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI
Sbjct: 86 MGGETAELVL-EGRPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +LGEQ+ VPVY+ P QIA + EAK K D+VIVDTAGRL ID+ MM+E+
Sbjct: 145 EQLRVLGEQIEVPVYSELDSKNPVQIALNAIHEAKAKGYDLVIVDTAGRLAIDEQMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K+ +NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 EAIKKAINPDETLFVVDSMTGQDAVNTAREFNERLDFNGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP+E
Sbjct: 325 NQFDFNDFLSQIHQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPQE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 356
R PE+L + RR R+A+ SG + Q+V++L+ Q Q R MK + G G +P L
Sbjct: 384 RTNPEIL--NGTRRTRIAKGSGTSIQEVNRLLKQFDQTRKMMKMVTGSKMGKMMPKL 438
>gi|310641514|ref|YP_003946272.1| signal recognition (srp) component [Paenibacillus polymyxa SC2]
gi|386040545|ref|YP_005959499.1| signal recognition particle 54 kDa protein 2 SRP54 [Paenibacillus
polymyxa M1]
gi|309246464|gb|ADO56031.1| Signal recognition (SRP) component [Paenibacillus polymyxa SC2]
gi|343096583|emb|CCC84792.1| signal recognition particle 54 kDa protein 2 SRP54 [Paenibacillus
polymyxa M1]
Length = 458
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 175/363 (48%), Positives = 251/363 (69%), Gaps = 5/363 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG ++L A PTVI++ GLQG GKTT S KLA L+KQ +LVAGD+YRPAAI
Sbjct: 87 MGGSQAKLAKANKPPTVIMMVGLQGAGKTTTSGKLAKLLQKQNHRPLLVAGDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ILGEQ+ PV+T G + P +IAKQGL+ AK D VI+DTAGRL +D+ +M+EL+
Sbjct: 147 QLQILGEQINAPVFTLGDQTSPVEIAKQGLQHAKDNGNDYVIIDTAGRLHVDEELMEELR 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+ + P EVLLVVD+MTGQ+A + FN + +TG +LTKLDGD+RGGAALSVK V+
Sbjct: 207 QIHTNVKPDEVLLVVDSMTGQDAVNVAEHFNNSLELTGVVLTKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK GE+++ +EPF+P+RMA RILGMGD+LS +EKAQ + + A+EM++K+ +A
Sbjct: 267 GCPIKFATLGEKLDAMEPFHPERMASRILGMGDMLSLIEKAQSNIDADKAKEMERKMRNA 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEE 299
F F DFL+Q V ++G + +++ MIPGMG + + ++ +K + +EA++ +MT +E
Sbjct: 327 EFTFEDFLEQMDQVKKLGPIDQILDMIPGMGNMKQMKDIKVDDKQMGRIEAIVHSMTKQE 386
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM--EGGSLPALS 357
++ P+++ S RRKR+A SG + +V++L+ Q +MR MK +M +GG AL
Sbjct: 387 KQNPDMINHS--RRKRIAVGSGTSLAEVNRLIKQFDEMRRMMKQFSDMMGPKGGKNKALK 444
Query: 358 NLE 360
L+
Sbjct: 445 QLK 447
>gi|15615047|ref|NP_243350.1| signal recognition particle [Bacillus halodurans C-125]
gi|10175104|dbj|BAB06203.1| signal recognition particle [Bacillus halodurans C-125]
Length = 451
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 172/348 (49%), Positives = 251/348 (72%), Gaps = 8/348 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTV+++ GLQG GKTT +AKLAN+L KK ++ +LVA D+YRPAAI
Sbjct: 87 MGGEQSKIAVASKPPTVVMMVGLQGAGKTTTTAKLANHLRKKHNRNPILVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ +E AK+++ D V++DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLNMPVFSLGDQVSPVEIAKQAIERAKEEHHDYVLIDTAGRLHIDEELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ VK V P E+LLVVDAMTGQ+A + +F+ ++ ++G +LTKLDGD+RGGAALSVK V
Sbjct: 207 QQVKEVAKPDEILLVVDAMTGQDAVNVAESFHEQLDVSGVVLTKLDGDTRGGAALSVKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A E++KK+ +
Sbjct: 267 TNTPIKFAGMGEKIDQLEPFHPERMASRILGMGDVLTLIEKAQSTVDEEKARELEKKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK---ITPAQVREAEKSLKIMEAMIEAMT 296
+F F+DFL+Q V MG + ++GM+PGM K + QV EK + +EA++ +MT
Sbjct: 327 MDFTFDDFLEQLDQVRSMGPLDELLGMMPGMNKAKGLKNLQV--DEKQISRVEAIVRSMT 384
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+E++ P ++ S RR+R+A+ SG Q V++L+ Q +M+ MK +
Sbjct: 385 KQEKQDPSIINAS--RRRRIAKGSGTAIQDVNRLLKQFEEMKKMMKQM 430
>gi|300728157|ref|ZP_07061528.1| signal recognition particle protein [Prevotella bryantii B14]
gi|299774583|gb|EFI71204.1| signal recognition particle protein [Prevotella bryantii B14]
Length = 449
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 186/368 (50%), Positives = 248/368 (67%), Gaps = 19/368 (5%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE + + RP +IL++GLQG GKTT S KLAN LK KQ K+ +LVA DVYRPAAI
Sbjct: 86 MGGESVPMKL-EGRPAIILMSGLQGSGKTTFSGKLANLLKAKQHKNPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ++GE VGVPVY IA L+EAK K+ DVVI+DTAGRL ID+ MM E+
Sbjct: 145 DQLKVVGESVGVPVYCEPENKDVLSIADHALQEAKAKSHDVVIIDTAGRLAIDEQMMTEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++K ++P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 SNLKNHVHPDETLFVVDSMTGQDAVNTAKEFNERLDFDGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+ME L+ F+P RMA RILGMGDV+S VE+AQE +E+A+++QKKI
Sbjct: 265 VDKPIKFIGTGEKMEALDVFHPSRMADRILGMGDVVSLVERAQEQFDEEEAKKLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE---KSLKIMEAMIEAMT 296
FDFNDFL Q + +MG++ + MIPG+GK +R+ E + K +EA+I++MT
Sbjct: 325 NQFDFNDFLNQIEQIKKMGNLKDLASMIPGVGK----AIRDVEIDDNAFKGIEAIIKSMT 380
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMGVM 348
PEER PE+L S RRKR+A+ SG Q+V++L+ Q Q R MK ++M M
Sbjct: 381 PEERSHPEILNSS--RRKRIAKGSGTDIQEVNRLIKQFDQTRKMMKMVTGNKMASMMARM 438
Query: 349 EGGSLPAL 356
+G ++P +
Sbjct: 439 KGMNIPGM 446
>gi|313205775|ref|YP_004044952.1| signal recognition particle subunit ffh/srp54 (srp54) [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|383485092|ref|YP_005394004.1| signal recognition particle subunit ffh/srp54 (srp54) [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|386322241|ref|YP_006018403.1| hypothetical protein RIA_2012 [Riemerella anatipestifer RA-GD]
gi|407452570|ref|YP_006724295.1| Signal recognition particle GTPase [Riemerella anatipestifer
RA-CH-1]
gi|416111226|ref|ZP_11592483.1| signal recognition particle protein [Riemerella anatipestifer
RA-YM]
gi|442315048|ref|YP_007356351.1| Signal recognition particle GTPase [Riemerella anatipestifer
RA-CH-2]
gi|312445091|gb|ADQ81446.1| signal recognition particle subunit FFH/SRP54 (srp54) [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|315022827|gb|EFT35851.1| signal recognition particle protein [Riemerella anatipestifer
RA-YM]
gi|325336784|gb|ADZ13058.1| Ffh [Riemerella anatipestifer RA-GD]
gi|380459777|gb|AFD55461.1| signal recognition particle subunit ffh/srp54 (srp54) [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|403313554|gb|AFR36395.1| Signal recognition particle GTPase [Riemerella anatipestifer
RA-CH-1]
gi|441483971|gb|AGC40657.1| Signal recognition particle GTPase [Riemerella anatipestifer
RA-CH-2]
Length = 454
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 177/335 (52%), Positives = 235/335 (70%), Gaps = 5/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAI 59
MGG E + +PTVIL+AGLQG GKTT S KLANYLKK+ K+ +LVA DVYRPAAI
Sbjct: 86 MGGS-QEGINLSGKPTVILIAGLQGSGKTTFSGKLANYLKKKRAKNPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +LG Q G+PVYT PS IA+ + AK DVVIVDTAGRL ID+ MM+E+
Sbjct: 145 DQLKVLGSQTGIPVYTEEENKNPSTIAENAVNFAKANKHDVVIVDTAGRLAIDEQMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K V + PTE L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL+++ V
Sbjct: 205 KSVHYFIKPTETLFVVDSMTGQDAVNTAKAFNDALNFDGVVLTKLDGDTRGGAALTIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK + GE+ME L+ FYP+RMA RILGMGDV+S VE+AQE +E+A+++QKKI
Sbjct: 265 VNKPIKFISTGEKMEALDLFYPERMADRILGMGDVVSLVERAQEQFDEEEAKKLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFLKQ + + +MG+M ++GM+PG+GK V + S K +EA+I +MTPEE
Sbjct: 325 NEFGFDDFLKQIQQIKKMGNMKDLLGMLPGVGKAIK-DVDIDDNSFKHIEAIIHSMTPEE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
R +P ++ + R+KR+A+ SG+ ++V+QL+ Q
Sbjct: 384 RRRPSIIDVN--RKKRIAKGSGRKLEEVNQLMKQF 416
>gi|188585994|ref|YP_001917539.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Natranaerobius thermophilus JW/NM-WN-LF]
gi|179350681|gb|ACB84951.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Natranaerobius thermophilus JW/NM-WN-LF]
Length = 447
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 177/339 (52%), Positives = 248/339 (73%), Gaps = 7/339 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEVSE+ F+ PTVI+L+GLQG GKTT SAKLA KK GK+ ++VA D RPAAI
Sbjct: 86 MGGEVSEVNFSDQPPTVIMLSGLQGTGKTTASAKLAKKFKKDGKNPLMVACDTQRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ +PV++ G + P+ IAK +E AKK +DVVI+DTAGRL ID+ +M EL+
Sbjct: 146 QLQVLGEQTDIPVFSMGDKQHPADIAKGAVEHAKKNQMDVVILDTAGRLHIDEDLMTELR 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+V+ + P E+LLVVDAMTGQ+A + F+ ++ ++G ++TKLDGD+RGGAALSVK+V+
Sbjct: 206 EVESSVEPHEILLVVDAMTGQDAVNVAERFDQDLDLSGIVMTKLDGDTRGGAALSVKKVT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE++++LE F+PDR+A RILGMGDV+S +EKA+ M Q+ A+E++KKI S
Sbjct: 266 GKPIKFIGTGEKVDELEVFHPDRLASRILGMGDVMSLIEKAETSMDQKKAQELEKKIKSQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG---KITPAQVREAEKSLKIMEAMIEAMTP 297
+F F DFL+Q + + MG + +++ M+PGM K+ V E E L +EA+I++MT
Sbjct: 326 SFTFEDFLEQLQQLKSMGPLDQIMDMMPGMAGNKKMKNFSVDEQE--LVKIEAIIQSMTQ 383
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 336
EER KPE++ S R+KR+A+ SG Q V++L+ Q Q
Sbjct: 384 EERVKPEVINSS--RKKRIAKGSGTRVQDVNKLLKQFEQ 420
>gi|371777551|ref|ZP_09483873.1| signal recognition particle protein [Anaerophaga sp. HS1]
Length = 444
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 183/359 (50%), Positives = 246/359 (68%), Gaps = 8/359 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG +++ K P VIL+AGLQG GKTT S KLAN +K K+GK +LVAGDVYRPAAI
Sbjct: 86 MGGTSTDINL-KGNPAVILIAGLQGSGKTTFSGKLANLIKSKRGKHPVLVAGDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +LGEQ+GVPVYT P +IAK G++EAK K DVVI+DTAGRL ID+ MM+E+
Sbjct: 145 NQLQVLGEQIGVPVYTEEGNTDPVKIAKAGIKEAKAKGHDVVIIDTAGRLAIDEEMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K + P E L VVDAMTGQ+A FN + G +LTKLDGD+RGGAA+S++ V
Sbjct: 205 SAIKEAVKPHETLFVVDAMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAISIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+M+ L+ F+P RMA RILGMGD++S VEKAQE E+A ++QKKI
Sbjct: 265 VDKPIKFVGMGEKMDALDVFHPSRMADRILGMGDIVSLVEKAQEQYDAEEARKLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F+F+DFL Q R + +MG++ + MIPGMGK+ V + + K +EA+I +MTP+E
Sbjct: 325 NQFNFDDFLGQIRQIKKMGNLKDLAAMIPGMGKMLK-NVDIDDDAFKGVEAIISSMTPQE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSN 358
R+ P ++ S RRKR+A SG + Q+V++L+ Q R M+ + +G +L + N
Sbjct: 384 RQNPSIINGS--RRKRIAAGSGTSIQEVNRLIKQFEDTRKAMRMM---TQGKNLSKMMN 437
>gi|125973288|ref|YP_001037198.1| signal recognition particle subunit FFH/SRP54 (srp54) [Clostridium
thermocellum ATCC 27405]
gi|256003768|ref|ZP_05428756.1| signal recognition particle protein [Clostridium thermocellum DSM
2360]
gi|281417492|ref|ZP_06248512.1| signal recognition particle protein [Clostridium thermocellum JW20]
gi|385778800|ref|YP_005687965.1| signal recognition particle protein [Clostridium thermocellum DSM
1313]
gi|419723183|ref|ZP_14250318.1| signal recognition particle protein [Clostridium thermocellum AD2]
gi|419724913|ref|ZP_14251968.1| signal recognition particle protein [Clostridium thermocellum YS]
gi|125713513|gb|ABN52005.1| signal recognition particle protein [Clostridium thermocellum ATCC
27405]
gi|255992329|gb|EEU02423.1| signal recognition particle protein [Clostridium thermocellum DSM
2360]
gi|281408894|gb|EFB39152.1| signal recognition particle protein [Clostridium thermocellum JW20]
gi|316940480|gb|ADU74514.1| signal recognition particle protein [Clostridium thermocellum DSM
1313]
gi|380771533|gb|EIC05398.1| signal recognition particle protein [Clostridium thermocellum YS]
gi|380780950|gb|EIC10613.1| signal recognition particle protein [Clostridium thermocellum AD2]
Length = 446
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 167/331 (50%), Positives = 238/331 (71%), Gaps = 2/331 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S++ F+ PT+ ++ GLQG GKTT S KLAN L+KQGK +LVA DVYRPAAI
Sbjct: 87 MGSANSKVTFSSKPPTIYMMVGLQGSGKTTTSGKLANLLRKQGKKPLLVACDVYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G Q+G+ V++ G + P IAK +E AK + D+VI+DTAGRL I++ +M+EL+
Sbjct: 147 QLQVVGSQLGIEVFSMGDKTNPVDIAKAAVEYAKSRQYDLVIIDTAGRLHINEELMEELQ 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + P E+LLVVD+MTGQ+A + +FN ++G+ G ILTKLDGD+RGGAALSVK V+
Sbjct: 207 NIKEAVRPQEILLVVDSMTGQDAVNVAESFNEKLGVDGIILTKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE++ D+EPF+PDRMA RILGMGDVLS +EKAQE ++ A E++KK+ +
Sbjct: 267 GKPIKFIGMGEKLNDIEPFFPDRMASRILGMGDVLSLIEKAQEAFDEKKALELEKKMRTQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F DFL+Q + + +MG +++++ MIPG + EK + +EA+I++MT EER
Sbjct: 327 QFTLEDFLEQMQQIKKMGPLNQLLAMIPGFNANVMKDIELDEKKMARVEAIIKSMTKEER 386
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLV 331
P ++ S RRKR+A SG T Q+V++L+
Sbjct: 387 NNPSIINGS--RRKRIAAGSGTTVQEVNKLL 415
>gi|315607956|ref|ZP_07882949.1| signal recognition particle protein [Prevotella buccae ATCC 33574]
gi|315250425|gb|EFU30421.1| signal recognition particle protein [Prevotella buccae ATCC 33574]
Length = 447
Score = 344 bits (883), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 182/347 (52%), Positives = 240/347 (69%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE + LV K+RP +IL++GLQG GKTT S KLAN LK K+ K+ +LVA DVYRPAAI
Sbjct: 86 MGGEDAPLVL-KNRPAIILMSGLQGSGKTTFSGKLANMLKTKEHKNPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ++GEQVGVPVY IA L+EAK KN DVVI+DTAGRL +D+ MM E+
Sbjct: 145 DQLKVVGEQVGVPVYAEPDNKDVIAIAANALKEAKAKNYDVVIIDTAGRLAVDEQMMTEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++K+ +NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 SNLKQAVNPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A +QKKI
Sbjct: 265 VTKPIKFIGTGEKMEAIDVFHPARMADRILGMGDVVSLVERAQEQFDEEEARRLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK V + + K +E++I++MTP+E
Sbjct: 325 NQFDFNDFLNQIEQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIESIIKSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R PE+L S RR+R+A+ SG Q V++L+ Q Q R MK + G
Sbjct: 384 RSNPEILNSS--RRQRIAKGSGMNIQDVNRLIKQFDQTRKMMKMVTG 428
>gi|152976211|ref|YP_001375728.1| signal recognition particle protein [Bacillus cytotoxicus NVH
391-98]
gi|152024963|gb|ABS22733.1| signal recognition particle protein [Bacillus cytotoxicus NVH
391-98]
Length = 449
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 172/349 (49%), Positives = 252/349 (72%), Gaps = 4/349 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI
Sbjct: 87 MGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK+++ D V++DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEEHHDYVLIDTAGRLHIDEELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK V NP E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V
Sbjct: 207 AKVKEVANPDEIFLVVDAMTGQDAVNVAKSFHEQLGLTGVVLTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ +EPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TNTPIKFAGMGEKLDAIEPFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+F +DFL+Q V ++G + ++GM+PG KI + + +K + +EA+I +MT
Sbjct: 327 LSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAKVDDKQIGHIEAIIRSMTKL 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK L G+
Sbjct: 387 EREQPEIINAS--RKKRIAKGSGTTVQEINRLLKQFEDMKKMMKTLTGM 433
>gi|150004753|ref|YP_001299497.1| signal recognition protein [Bacteroides vulgatus ATCC 8482]
gi|294775183|ref|ZP_06740709.1| signal recognition particle protein [Bacteroides vulgatus PC510]
gi|319641812|ref|ZP_07996491.1| hypothetical protein HMPREF9011_02089 [Bacteroides sp. 3_1_40A]
gi|345518550|ref|ZP_08797997.1| signal recognition particle protein [Bacteroides sp. 4_3_47FAA]
gi|423312329|ref|ZP_17290266.1| signal recognition particle protein [Bacteroides vulgatus
CL09T03C04]
gi|149933177|gb|ABR39875.1| putative signal recognition protein [Bacteroides vulgatus ATCC
8482]
gi|254835935|gb|EET16244.1| signal recognition particle protein [Bacteroides sp. 4_3_47FAA]
gi|294450995|gb|EFG19469.1| signal recognition particle protein [Bacteroides vulgatus PC510]
gi|317386568|gb|EFV67468.1| hypothetical protein HMPREF9011_02089 [Bacteroides sp. 3_1_40A]
gi|392688813|gb|EIY82097.1| signal recognition particle protein [Bacteroides vulgatus
CL09T03C04]
Length = 440
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 180/357 (50%), Positives = 244/357 (68%), Gaps = 5/357 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE +ELV + RP VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI
Sbjct: 86 MGGETAELVL-EGRPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +LGEQ+ VPVY+ P QIA + EAK K D+VIVDTAGRL ID+ MM+E+
Sbjct: 145 EQLRVLGEQIEVPVYSELDSKNPVQIALNAIHEAKAKGYDLVIVDTAGRLAIDEQMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K+ +NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 EAIKKAVNPDETLFVVDSMTGQDAVNTAREFNERLDFNGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP+E
Sbjct: 325 NQFDFNDFLSQIHQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPQE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 356
R PE+L + RR R+A+ SG + Q+V++L+ Q Q R MK + G G +P L
Sbjct: 384 RTNPEIL--NGTRRTRIAKGSGTSIQEVNRLLKQFDQTRKMMKMVTGSKMGKMMPKL 438
>gi|374582903|ref|ZP_09655997.1| signal recognition particle protein [Desulfosporosinus youngiae DSM
17734]
gi|374418985|gb|EHQ91420.1| signal recognition particle protein [Desulfosporosinus youngiae DSM
17734]
Length = 453
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 177/344 (51%), Positives = 241/344 (70%), Gaps = 4/344 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG +++ + PT+ILL GLQG GKTT +AKLAN LKKQGK +LVA D+YRPAAI
Sbjct: 86 MGGATGKILISSKPPTIILLIGLQGAGKTTHAAKLANMLKKQGKHPLLVACDIYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG Q+ VPV++ G E P IAK + A + DVVI+DTAGRL I++ +M EL+
Sbjct: 146 QLQVLGGQLNVPVFSMGQEA-PRDIAKASIAHANQNGQDVVIIDTAGRLHINEELMGELR 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K + P E+LLVVDAMTGQ+A + +F+ E+G+ G ILTKLDGD+RGG ALS+K V+
Sbjct: 205 DIKSAVKPHEILLVVDAMTGQDAVNVAESFHNELGLDGVILTKLDGDTRGGGALSIKAVT 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G IK VG GE+M+ LEPF+PDRMA RILGMGDVL+ +EKAQE ++ A+EM++K+
Sbjct: 265 GCTIKFVGIGEKMDALEPFHPDRMASRILGMGDVLTLIEKAQESFDEKKAKEMEQKLRKQ 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F +DFL Q + +MG +S ++ MIPG+GK ++ EK +EA+I +MT EER
Sbjct: 325 EFTLDDFLDQMEQMKKMGPLSSILEMIPGVGK-QAKDIKIDEKDTAHVEAIIRSMTTEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
KP ++ +S R+KR+A+ SG + Q V +L+ Q QM+ MK
Sbjct: 384 RKPVIIKDS--RKKRIAKGSGTSVQDVGRLLKQFEQMQKMMKQF 425
>gi|336436408|ref|ZP_08616120.1| signal recognition particle protein [Lachnospiraceae bacterium
1_4_56FAA]
gi|336007273|gb|EGN37298.1| signal recognition particle protein [Lachnospiraceae bacterium
1_4_56FAA]
Length = 449
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 180/351 (51%), Positives = 246/351 (70%), Gaps = 5/351 (1%)
Query: 1 MGGEVSELVFAK-SRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAI 59
MG E +E+ S TVI++AGLQG GKTT +AKLA K +GK +LVA DVYRPAAI
Sbjct: 87 MGSETTEITLQPGSATTVIMMAGLQGAGKTTTTAKLAGKFKLKGKKPLLVACDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL I GE+ GV V++ G + KP+ IAK +E A K + ++VI+DTAGRL ID+ MM EL
Sbjct: 147 KQLQINGEKQGVEVFSMGDKAKPADIAKAAMEHAAKNHNNLVILDTAGRLHIDEDMMAEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+++K +N + +LVVDAMTGQ+A + ++FN +IGI G I+TKLDGD+RGGAALS+K V
Sbjct: 207 QEIKEAVNVHQTILVVDAMTGQDAVNVASSFNEKIGIDGVIVTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PI VG GE++ DLE FYPDRMA RILGMGDVL+ +EKA + +E A +M +K+
Sbjct: 267 TGCPILYVGMGEKLSDLEQFYPDRMASRILGMGDVLTLIEKAGAELDEEKARQMTQKLKK 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTP 297
A FDF D+L+ + +MG +S ++GM+PG+G K+ E EK + MEAMI +MTP
Sbjct: 327 AQFDFEDYLESMSQMKKMGGLSSIMGMMPGIGGKKMPDLDSEENEKKMAQMEAMIYSMTP 386
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 348
EER P+LL +P R+ R+A+ +G +V+++V Q +MR MK L G+M
Sbjct: 387 EERRNPDLL--NPSRKHRIAKGAGVDIAEVNRMVKQFNEMRKMMKKLPGLM 435
>gi|390454100|ref|ZP_10239628.1| signal recognition (srp) component [Paenibacillus peoriae KCTC
3763]
Length = 458
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 175/363 (48%), Positives = 250/363 (68%), Gaps = 5/363 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG ++L A PTVI++ GLQG GKTT S KLA L+KQ +LVAGD+YRPAAI
Sbjct: 87 MGGSQAKLAKANKPPTVIMMVGLQGAGKTTTSGKLAKLLQKQNHRPLLVAGDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ILGEQ+ PV+T G + P IAKQGL+ AK D VI+DTAGRL +D+ +M+EL+
Sbjct: 147 QLQILGEQINAPVFTLGDQTSPVDIAKQGLQHAKDNGNDYVIIDTAGRLHVDEELMEELR 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+ + P EVLLVVD+MTGQ+A + FN + +TG +LTKLDGD+RGGAALSVK V+
Sbjct: 207 QIHANVKPDEVLLVVDSMTGQDAVNVAEHFNSSLELTGVVLTKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK GE+++ +EPF+P+RMA RILGMGD+LS +EKAQ + + A+EM++K+ +A
Sbjct: 267 GCPIKFATLGEKLDAMEPFHPERMASRILGMGDMLSLIEKAQSNIDADKAKEMERKMRNA 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEE 299
F F DFL+Q V ++G + +++ MIPGMG + + ++ +K + +EA++ +MT +E
Sbjct: 327 EFTFEDFLEQMDQVKKLGPIDQILDMIPGMGNMKQMKDIKVDDKQMGRIEAIVHSMTTQE 386
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM--EGGSLPALS 357
++ P+++ S RRKR+A SG + +V++L+ Q +MR MK +M +GG AL
Sbjct: 387 KQNPDMINHS--RRKRIAVGSGTSLAEVNRLIKQFDEMRRMMKQFSDMMGPKGGKNKALK 444
Query: 358 NLE 360
L+
Sbjct: 445 QLK 447
>gi|359404602|ref|ZP_09197435.1| signal recognition particle protein [Prevotella stercorea DSM
18206]
gi|357560144|gb|EHJ41545.1| signal recognition particle protein [Prevotella stercorea DSM
18206]
Length = 450
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 180/347 (51%), Positives = 240/347 (69%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE +EL RP++IL++GLQG GKTT S KLAN LK KQ K+ +LVA DVYRPAAI
Sbjct: 86 MGGEAAELNL-NGRPSIILMSGLQGSGKTTFSGKLANMLKNKQHKNPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL ++GEQ+GVPVY+ IA + EAK K+ DVVIVDTAGRL +D+ MM+E+
Sbjct: 145 EQLKVVGEQIGVPVYSEPESKDVVSIANNAIREAKAKSYDVVIVDTAGRLAVDEEMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K +NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 ETLKNAINPNETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+ME ++ F+P RMA RILGMGD++S VE+AQE +E+A +QKKI
Sbjct: 265 VTKPIKFVGTGEKMEAIDVFHPSRMADRILGMGDIVSLVERAQEQFDEEEARRLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK V + + K +EA+I++MTP+E
Sbjct: 325 NKFDFNDFLGQIEQIKKMGNLKDLAAMIPGVGKAIK-DVDIDDNAFKGIEAIIKSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R PE+L +S RR R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 384 RTNPEILNQS--RRMRIAKGSGTNIQEVNRLIKQFDQTRKMMKMVTG 428
>gi|427394186|ref|ZP_18887688.1| signal recognition particle protein [Alloiococcus otitis ATCC
51267]
gi|425730174|gb|EKU93017.1| signal recognition particle protein [Alloiococcus otitis ATCC
51267]
Length = 499
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 171/357 (47%), Positives = 249/357 (69%), Gaps = 10/357 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGK-SCMLVAGDVYRPAAI 59
MGG+ +++ TV ++ GLQG GKTT + KLANYL+K M+VAGDVYRPAAI
Sbjct: 87 MGGDRQDIITNDQGITVYMMTGLQGAGKTTTAGKLANYLRKHKNMKPMMVAGDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+++ +PV++ G +V P +IA+QG++ AK +N +VVI+DTAGRL +D+A+MDEL
Sbjct: 147 DQLETIGKELNIPVFSMGDQVSPVEIAEQGIQAAKDQNRNVVIIDTAGRLHVDQALMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++K ++P E+ LVVDAMTGQ+A + FN ++ I+ ILTKLDGD+RGGAALS+ ++
Sbjct: 207 ANIKSAVDPEEIFLVVDAMTGQDAVNVADAFNDQLDISSVILTKLDGDTRGGAALSISKI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK G GE+++ L+PFYPDRMA RILGMGD+L+ VEKAQ+ M ++ A E+ K+
Sbjct: 267 TNKPIKFTGTGEKLDALDPFYPDRMANRILGMGDILTLVEKAQQDMDEKRARELADKMAD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
+DFNDF++Q + MG M +I MIPGM ++ P + +K L M+A++++MT
Sbjct: 327 QTYDFNDFIEQMDQMRNMGPMEDIIKMIPGMNQL-PGLDDFQVDDKDLDRMKAIVQSMTM 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 354
EER P++L+++ RR+R+A SG+ V +L+ Q Q R LMG M G +P
Sbjct: 386 EERRNPDMLSQN--RRRRIAAGSGRPLADVHKLIKQFKQSR----ELMGKMSKGKMP 436
>gi|219117644|ref|XP_002179613.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408666|gb|EEC48599.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 448
Score = 344 bits (882), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 182/335 (54%), Positives = 240/335 (71%), Gaps = 9/335 (2%)
Query: 15 PTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 74
P VILLAGLQG GKTT + KLA +LK+Q K +LVA D+YRPAAI QL +LGE +GV V+
Sbjct: 93 PAVILLAGLQGAGKTTAAGKLALFLKEQRK-VLLVAADIYRPAAIKQLQVLGESIGVEVF 151
Query: 75 TAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLV 134
T GT+V P +I G+++A+ + D VIVDTAGR ID +MDEL+ +KR +P E LL+
Sbjct: 152 TKGTDVDPVEIVNAGIQKARDEGYDTVIVDTAGRQVIDTDLMDELQRMKRAASPQETLLI 211
Query: 135 VDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERME 194
VDAMTGQEAA+L F+ IG+TGAILTK+DGDSRGGAA+SV+ VSGKPIK VG GE+
Sbjct: 212 VDAMTGQEAASLTAAFDSAIGLTGAILTKMDGDSRGGAAVSVRGVSGKPIKFVGTGEKTA 271
Query: 195 DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTV 254
DLEPFYPDRMA RILGMGDV+S VEKA + DA +MQ+K++ A+FDF+DF+KQ+ V
Sbjct: 272 DLEPFYPDRMASRILGMGDVVSLVEKAASEVSDADALKMQQKMLDASFDFDDFVKQSELV 331
Query: 255 ARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRR 313
+MGS++ + ++PGM ++ Q+RE E LK ++MI +MT +ER PELL + R
Sbjct: 332 TKMGSVAGIAKLMPGMANQLNMNQIREVEARLKKSKSMISSMTKKERANPELLIKDSSAR 391
Query: 314 K---RVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM 345
R+ + SG + Q +++ FQ RMK +M
Sbjct: 392 SRLIRITKGSGCGLDEGQQFMSE-FQ---RMKTMM 422
>gi|322387559|ref|ZP_08061168.1| signal recognition particle protein [Streptococcus infantis ATCC
700779]
gi|419843114|ref|ZP_14366438.1| signal recognition particle protein [Streptococcus infantis ATCC
700779]
gi|321141426|gb|EFX36922.1| signal recognition particle protein [Streptococcus infantis ATCC
700779]
gi|385703216|gb|EIG40342.1| signal recognition particle protein [Streptococcus infantis ATCC
700779]
Length = 521
Score = 344 bits (882), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 174/353 (49%), Positives = 245/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEDARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKTLAQPNEILLVIDAMIGQEAANVAREFNAQLEVTGIILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRMA RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMASRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDEKQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIAAGSGNTFIDVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|284047845|ref|YP_003398184.1| signal recognition particle protein [Acidaminococcus fermentans DSM
20731]
gi|283952066|gb|ADB46869.1| signal recognition particle protein [Acidaminococcus fermentans DSM
20731]
Length = 448
Score = 344 bits (882), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 173/350 (49%), Positives = 247/350 (70%), Gaps = 6/350 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG S+L A + PTVI+L GLQG GKTT KLANYL+K GK ++VAGDVYRPAAI
Sbjct: 87 LGGTQSKLNVAANPPTVIMLVGLQGAGKTTTVGKLANYLRKNGKKPLMVAGDVYRPAAIT 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G+Q+ +PV++ G +V P +IA++ L+ A D V++DTAGRL +D+ +M+ELK
Sbjct: 147 QLEVIGKQLDMPVFSMGDQVSPVEIARESLKRANALLCDTVLIDTAGRLHVDETLMNELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K +NP E+LLVVDAMTGQ+A + +FN +GITG I+TKLDGD+RGGA LSVK V+
Sbjct: 207 DMKTAVNPDEILLVVDAMTGQDAVTVADSFNKALGITGLIVTKLDGDARGGAVLSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
P+K VG GE+++ L+PFYPDRMA RILGMGDVLS +EKAQE + + A++M + +
Sbjct: 267 NCPVKFVGMGEKLDALQPFYPDRMASRILGMGDVLSLIEKAQEAIDVDSAKKMAESLKKN 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE---KSLKIMEAMIEAMTP 297
F + FL Q + V ++GS+ ++ MIPGMGK Q+ + K ++ +EA+I +MTP
Sbjct: 327 EFTLDMFLDQMKQVKKLGSLESILSMIPGMGKFA-KQLEGVDLDGKEVRRLEAIIYSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
+ER+ P ++ S RRKR+A G+ Q V++L+ Q + + MK + G+
Sbjct: 386 QERQNPRIINGS--RRKRIAAGCGQRVQDVNRLLKQFEESKKLMKTMQGM 433
>gi|138894717|ref|YP_001125170.1| Signal recognition particle subunit Ffh/SRP54 [Geobacillus
thermodenitrificans NG80-2]
gi|134266230|gb|ABO66425.1| Signal recognition particle, subunit Ffh/SRP54 [Geobacillus
thermodenitrificans NG80-2]
Length = 455
Score = 344 bits (882), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 170/336 (50%), Positives = 245/336 (72%), Gaps = 4/336 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAI 59
MGGE S++ AK PTV+++ GLQG GKTT + KLAN L+K + +LVA DVYRPAAI
Sbjct: 96 MGGEQSKIAVAKKPPTVVMMVGLQGAGKTTTTGKLANLLRKRHNRKPLLVAADVYRPAAI 155
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G P +IAKQ LE AK+++ D V++DTAGRL +D+A+MDEL
Sbjct: 156 KQLETLGKQLNMPVFSLGEHANPVEIAKQALERAKEEHHDYVLIDTAGRLHVDEALMDEL 215
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K ++ + P E+ LVVDAMTGQ+A + +F+ ++GITG ILTKLDGD+RGGAALS++ V
Sbjct: 216 KQMREAVKPDEIFLVVDAMTGQDAVNVAQSFHEQLGITGVILTKLDGDTRGGAALSIRAV 275
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PIK VG GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 276 TGAPIKFVGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQAAVDEEKAKELEQKMRT 335
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
A F F+DFL Q V ++G + ++ M+PG KI ++ EK + +EA+I +MT E
Sbjct: 336 ATFTFDDFLDQLGQVRKLGPLDEILKMLPGANKIKGLDNIQVDEKQIARVEAIIRSMTKE 395
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
E+ PE++ S R+KR+A+ SG T Q+V++L+ Q
Sbjct: 396 EKMHPEIINGS--RKKRIAKGSGTTVQEVNRLLKQF 429
>gi|288800175|ref|ZP_06405634.1| signal recognition particle protein [Prevotella sp. oral taxon 299
str. F0039]
gi|288333423|gb|EFC71902.1| signal recognition particle protein [Prevotella sp. oral taxon 299
str. F0039]
Length = 446
Score = 344 bits (882), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 180/365 (49%), Positives = 250/365 (68%), Gaps = 13/365 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE +E+ P++IL++GLQG GKTT + KLAN LK KQ K +LVA DVYRPAAI
Sbjct: 86 MGGETAEVKLT-GHPSIILMSGLQGSGKTTFTGKLANLLKTKQNKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL+++GEQ+GVPVY+ +IA+ G++EAK K DVV++DTAGRL ID+ MM+E+
Sbjct: 145 EQLMVVGEQIGVPVYSEIENKNVVEIAQHGIQEAKAKGYDVVLIDTAGRLAIDEEMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K + PTE L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 SKLKESVQPTETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+ME ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VTKPIKFVGTGEKMEAIDLFHPSRMADRILGMGDIVSLVERAQEQFDEEEAKRLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFLKQ + +MG++ + MIPG+GK + + + K +EA+I++MTP+E
Sbjct: 325 NKFDFNDFLKQIEQIKKMGNLKDLASMIPGVGKAVK-DLDIDDNAFKGVEAIIKSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMGVMEGG 351
R PE++ S RR+R+A+ SG Q+V++L+ Q Q R MK N+M M+G
Sbjct: 384 RTNPEIINTS--RRQRIAKGSGTDIQEVNRLMKQFDQTRKMMKMVTGNGMANMMSRMKGM 441
Query: 352 SLPAL 356
+P +
Sbjct: 442 KMPGM 446
>gi|333979545|ref|YP_004517490.1| signal recognition particle protein [Desulfotomaculum kuznetsovii
DSM 6115]
gi|333823026|gb|AEG15689.1| signal recognition particle protein [Desulfotomaculum kuznetsovii
DSM 6115]
Length = 456
Score = 344 bits (882), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 176/348 (50%), Positives = 245/348 (70%), Gaps = 8/348 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S+L A PT++++ GL G GKTT +AKLAN ++KQG+ MLVAGDVYRPAAI
Sbjct: 87 MGGTQSKLNLAPKPPTIVMMVGLHGAGKTTTAAKLANLMRKQGRRPMLVAGDVYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+G+PV++ G P IA+ +E A K+ D+VI+DTAGRL+I++ MM EL+
Sbjct: 147 QLQVLGEQLGIPVFSMGDRHTPVDIARAAVEHAVKQGRDLVIIDTAGRLEINEEMMAELE 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E+LLVVDAMTGQ A + TFN +G+ G +LTKLDGD+RGGAALS+K V+
Sbjct: 207 TLKAAVRPHEILLVVDAMTGQVAVNIAETFNKRLGLDGVVLTKLDGDTRGGAALSIKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE+++ LEPF+PDRMA RILGMGDVL+ +EKAQ E + KKI SA
Sbjct: 267 GCPIKFVGVGEKLDALEPFHPDRMADRILGMGDVLTLIEKAQANFDAEQVARLNKKIRSA 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA----EKSLKIMEAMIEAMT 296
+F +DFL+Q + V ++G + ++I MIPG+G + +++E ++ L +EA+I++MT
Sbjct: 327 DFTLDDFLEQLQEVKKLGPIQQIISMIPGLGNMK--KLKELGDIDDRELVYVEAIIKSMT 384
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P ER P + S RR+R+A+ SG T Q+V+ ++ Q Q R M+ L
Sbjct: 385 PWERAHPHEINGS--RRRRIARGSGTTVQKVNSVLKQFEQTRKMMRQL 430
>gi|322391775|ref|ZP_08065240.1| signal recognition particle protein [Streptococcus peroris ATCC
700780]
gi|321145255|gb|EFX40651.1| signal recognition particle protein [Streptococcus peroris ATCC
700780]
Length = 521
Score = 344 bits (882), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 174/353 (49%), Positives = 245/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEDARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRMA RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMASRILGMGDMLTLIEKASQEYDEQKAFEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDEKQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIAAGSGNTFIDVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|311068118|ref|YP_003973041.1| signal recognition particle protein [Bacillus atrophaeus 1942]
gi|419823901|ref|ZP_14347434.1| signal recognition particle protein [Bacillus atrophaeus C89]
gi|310868635|gb|ADP32110.1| signal recognition particle protein [Bacillus atrophaeus 1942]
gi|388471938|gb|EIM08728.1| signal recognition particle protein [Bacillus atrophaeus C89]
Length = 446
Score = 344 bits (882), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 172/352 (48%), Positives = 256/352 (72%), Gaps = 4/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ AK PTVI++ GLQG GKTT + KLAN L KK + +LVA D+YRPAAI
Sbjct: 87 MGGEESKIAVAKRPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D VI+DTAGRL ID +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEEHYDYVILDTAGRLHIDHELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+VK + NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V
Sbjct: 207 ANVKEIANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + ++ A+E+++K+ +
Sbjct: 267 TNTPIKFAGLGEKLDALEAFHPERMASRILGMGDVLTLIEKAQASVDEDKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+F +DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I++MT
Sbjct: 327 MSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIKSMTVL 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
E+E+P+L+ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 387 EKEQPDLINAS--RRKRIAKGSGTSVQEVNRLLKQFEEMKKMMKQMTNMSKG 436
>gi|312622773|ref|YP_004024386.1| signal recognition particle protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203240|gb|ADQ46567.1| signal recognition particle protein [Caldicellulosiruptor
kronotskyensis 2002]
Length = 443
Score = 344 bits (882), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 174/344 (50%), Positives = 238/344 (69%), Gaps = 2/344 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG ++L F+ S ++ +L GLQG GKTT + KLA LK+QGK+ +LVA D+YRPAAI
Sbjct: 86 LGGSDTKLAFSPSGFSIYMLVGLQGSGKTTTAGKLAGLLKRQGKNPLLVACDIYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL I+ ++VGV + +IAK+G+E AK DV IVDTAGRL I++ +MDEL
Sbjct: 146 QLEIVAQKVGVKCFADYNSKDAVKIAKEGIEFAKASRCDVAIVDTAGRLHINQELMDELV 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + PTE+LLV+DAMTGQ+A + FN ++GI G I+TKLDGD+RGGAALSVK ++
Sbjct: 206 AIKNAIKPTEILLVLDAMTGQDAVNVAAAFNEQLGIDGIIMTKLDGDTRGGAALSVKAIT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK G GE+MEDLE F+PDRMA RILGMGD+L+ +EKAQE + Q+ AEE++KK+ S
Sbjct: 266 GKPIKFAGVGEKMEDLEAFHPDRMASRILGMGDILTLIEKAQEAIDQKKAEELEKKLRSM 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F DFL Q + + +MG +S++I MIPG+ EK LK +EA+I +MT EER
Sbjct: 326 QFTLEDFLDQLKQIKKMGPLSQIISMIPGVKLKGDVDFDAGEKELKKIEAIINSMTKEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+ P ++ S R++R+A SG T Q V++L+ Q M+ MK
Sbjct: 386 QDPSIINSS--RKRRIAMGSGTTVQDVNRLLRQFEDMKRMMKQF 427
>gi|288928375|ref|ZP_06422222.1| signal recognition particle protein [Prevotella sp. oral taxon 317
str. F0108]
gi|288331209|gb|EFC69793.1| signal recognition particle protein [Prevotella sp. oral taxon 317
str. F0108]
Length = 450
Score = 344 bits (882), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 182/347 (52%), Positives = 241/347 (69%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE L +RP +IL++GLQG GKTT S KLAN LK KQ K+ +LVA DVYRPAAI
Sbjct: 86 MGGETVGLQLT-NRPAIILMSGLQGSGKTTFSGKLANLLKGKQHKNPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL ++ +QVGVPVY+ +IA + EAK K DVVIVDTAGRL +D+ MMDE+
Sbjct: 145 EQLRVVAQQVGVPVYSEPDNKNVVEIANNAIREAKAKGNDVVIVDTAGRLAVDEEMMDEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K+ LNP E L VVD+MTGQ+A FN + I G +LTKLDGD+RGGAALS++ V
Sbjct: 205 YRLKQALNPDETLFVVDSMTGQDAVNTAREFNDRLDIDGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+ME ++ F+P+RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VTKPIKFVGTGEKMEAIDVFHPERMADRILGMGDIVSLVERAQEQFDEEEAKRLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFLKQ + +MG++ + MIPG+GK V + + K +EA+I++MTP+E
Sbjct: 325 NKFDFNDFLKQIEQIKKMGNLKDLASMIPGVGKAIK-DVDIDDNAFKGIEAIIKSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 384 RTNPEILNNS--RRQRIAKGSGTNIQEVNRLIKQFDQTRKMMKMMTG 428
>gi|392390806|ref|YP_006427409.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Ornithobacterium rhinotracheale DSM 15997]
gi|390521884|gb|AFL97615.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Ornithobacterium rhinotracheale DSM 15997]
Length = 446
Score = 344 bits (882), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 181/365 (49%), Positives = 249/365 (68%), Gaps = 12/365 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSC-MLVAGDVYRPAAI 59
MGGE EL + + PT+IL+AGLQG GKTT S KLA +LKK+ +LVAGDVYRPAAI
Sbjct: 86 MGGETQELNVS-ANPTIILIAGLQGSGKTTFSGKLAQFLKKKKSKKPLLVAGDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +LGEQ+ VPVYT P +IA+ L++A++ N +V+IVDTAGRL ID+AMM E+
Sbjct: 145 DQLKVLGEQIDVPVYTEEGNKNPVEIAQNALQQARQNNNNVIIVDTAGRLAIDEAMMQEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++V + + PTE L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL+++ V
Sbjct: 205 RNVHQAIKPTETLFVVDSMTGQDAVNTAKAFNEVLDYDGVVLTKLDGDTRGGAALTIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK + GE+++ L+ F+P RMA RILGMGDV+S VE+AQE +E+A +QKKI
Sbjct: 265 VDKPIKFISTGEKLDKLDVFHPSRMADRILGMGDVVSLVERAQEQFDEEEARRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFLKQ + + RMG+M ++GMIPG GK + + + K +EA+I +MT +E
Sbjct: 325 NKFDFNDFLKQIKQIKRMGNMKDLLGMIPGAGKALKG-IEIDDDAFKHVEAIIYSMTNQE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL-------MGVMEGGS 352
RE P ++ S R++R+A+ G++ Q V+QL+ Q QM MK + M M G
Sbjct: 384 RENPNIIDAS--RKRRIARGCGRSVQDVNQLLKQFSQMGKMMKFMQSSQGKAMMKMMGSK 441
Query: 353 LPALS 357
+P ++
Sbjct: 442 IPGMN 446
>gi|443632733|ref|ZP_21116912.1| signal recognition particle protein [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443347556|gb|ELS61614.1| signal recognition particle protein [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 446
Score = 343 bits (881), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 172/352 (48%), Positives = 256/352 (72%), Gaps = 4/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ AK PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI
Sbjct: 87 MGGEESKIAVAKRPPTVIMMVGLQGAGKTTTSGKLANLLRKKHNRKPILVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D VI+DTAGRL ID +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEEHYDYVILDTAGRLHIDHELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+VK + NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V
Sbjct: 207 TNVKEIANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + ++ A+E+++K+ +
Sbjct: 267 TNTPIKFAGLGEKLDALEAFHPERMASRILGMGDVLTLIEKAQASVDEDKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+F +DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I++MT
Sbjct: 327 MSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIKSMTVL 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
E+E+P+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 387 EKEQPDIINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|414154258|ref|ZP_11410577.1| Signal recognition particle protein [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411454049|emb|CCO08481.1| Signal recognition particle protein [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 446
Score = 343 bits (881), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 178/354 (50%), Positives = 250/354 (70%), Gaps = 7/354 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG +++ A PT+I+L GLQG GKTT + KLA L KQG+ +LVA D+YRPAAI
Sbjct: 86 LGGTQAKINMAAKPPTIIMLVGLQGAGKTTTAGKLAKLLSKQGRRPLLVAADIYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ +PV++ G E P +IA+ +++A DVVI+DTAGRL I++ +M EL
Sbjct: 146 QLQVLGEQLQIPVFSLGQE-NPVKIAQAAVDQAGSTGKDVVIIDTAGRLHINEELMGELA 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + P E+LLVVDAMTGQEA + TFN ++G+ G I+TKLDGD+RGGAALSV++V+
Sbjct: 205 EIKTAVKPHEILLVVDAMTGQEAVNVADTFNRKLGLDGIIMTKLDGDARGGAALSVRKVT 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK G GE+++ LEPF+PDRMA RILGMGDVL+ +EKAQ E A ++ KKI A
Sbjct: 265 GTPIKFAGMGEKLDALEPFHPDRMADRILGMGDVLTLIEKAQANFDAEQAAKLNKKIRQA 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE---KSLKIMEAMIEAMTP 297
+F+ DFL+Q + V ++G + +++GMIPGM K+T Q+++ + K L +EA+I +MTP
Sbjct: 325 DFNLEDFLEQLQQVKKLGPLEQILGMIPGMNKLTK-QLKDQQLDGKELAQVEAIIYSMTP 383
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 351
ER+ PE + S R+KR+A+ SG Q V+QL+ Q Q R MK L + +GG
Sbjct: 384 WERQHPEKIDGS--RKKRIARGSGTRVQDVNQLLKQFEQTRKMMKQLSNMTKGG 435
>gi|410460649|ref|ZP_11314323.1| signal recognition particle protein [Bacillus azotoformans LMG
9581]
gi|409926703|gb|EKN63857.1| signal recognition particle protein [Bacillus azotoformans LMG
9581]
Length = 447
Score = 343 bits (881), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 171/346 (49%), Positives = 252/346 (72%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGG S++ + PTV+++ GLQG GKTT + KL+N L KK + +LVA D+YRPAAI
Sbjct: 87 MGGSQSKIAVSNRPPTVVMMVGLQGAGKTTTTGKLSNLLRKKYNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+ + D V++DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLNIPVFSLGDQVSPVEIAKQAVEKAKEDHHDYVLIDTAGRLHIDETLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K + P E+ LVVDAMTGQ+A + +FN ++G+TG ILTKLDGD+RGGAALS+K V
Sbjct: 207 KQIKELAKPDEIFLVVDAMTGQDAVNVAESFNEQLGLTGTILTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK VG GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + QE A+E+++K+ +
Sbjct: 267 TNIPIKFVGMGEKLDQLEDFHPERMASRILGMGDVLTLIEKAQANVDQEKAKELEEKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+F F+DFL+Q V +MG + +IGM+PG KI + ++ EK +K +EA+I++MT +
Sbjct: 327 MSFTFDDFLEQLAQVRKMGPLDDLIGMLPGANKIKGLKDLKVDEKQIKHVEAIIQSMTKK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E+ PE++ S R+KR+A+ SG+T Q+V++L+ Q M+ K +
Sbjct: 387 EKVNPEIINAS--RKKRIAKGSGRTVQEVNRLLKQFEDMKKMFKQM 430
>gi|322376834|ref|ZP_08051327.1| signal recognition particle protein [Streptococcus sp. M334]
gi|321282641|gb|EFX59648.1| signal recognition particle protein [Streptococcus sp. M334]
Length = 523
Score = 343 bits (881), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 173/353 (49%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNTQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|196247664|ref|ZP_03146366.1| signal recognition particle protein [Geobacillus sp. G11MC16]
gi|196212448|gb|EDY07205.1| signal recognition particle protein [Geobacillus sp. G11MC16]
Length = 433
Score = 343 bits (881), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 170/336 (50%), Positives = 245/336 (72%), Gaps = 4/336 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAI 59
MGGE S++ AK PTV+++ GLQG GKTT + KLAN L+K + +LVA DVYRPAAI
Sbjct: 74 MGGEQSKIAVAKKPPTVVMMVGLQGAGKTTTTGKLANLLRKRHNRKPLLVAADVYRPAAI 133
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G P +IAKQ LE AK+++ D V++DTAGRL +D+A+MDEL
Sbjct: 134 KQLETLGKQLNMPVFSLGEHANPVEIAKQALERAKEEHHDYVLIDTAGRLHVDEALMDEL 193
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K ++ + P E+ LVVDAMTGQ+A + +F+ ++GITG ILTKLDGD+RGGAALS++ V
Sbjct: 194 KQMREAVKPDEIFLVVDAMTGQDAVNVAQSFHEQLGITGVILTKLDGDTRGGAALSIRAV 253
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PIK VG GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 254 TGAPIKFVGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQAAVDEEKAKELEQKMRT 313
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
A F F+DFL Q V ++G + ++ M+PG KI ++ EK + +EA+I +MT E
Sbjct: 314 ATFTFDDFLDQLGQVRKLGPLDEILKMLPGANKIKGLDNIQVDEKQIARVEAIIRSMTKE 373
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
E+ PE++ S R+KR+A+ SG T Q+V++L+ Q
Sbjct: 374 EKMHPEIINGS--RKKRIAKGSGTTVQEVNRLLKQF 407
>gi|134299902|ref|YP_001113398.1| signal recognition particle protein [Desulfotomaculum reducens
MI-1]
gi|134052602|gb|ABO50573.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfotomaculum reducens MI-1]
Length = 446
Score = 343 bits (881), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 175/347 (50%), Positives = 247/347 (71%), Gaps = 7/347 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG +++ + PT+I+L GLQG GKTT + KLA L KQG+ ++VAGD+YRPAAI
Sbjct: 86 LGGTQAKINLSPKPPTIIMLVGLQGAGKTTTAGKLAKLLSKQGRRPLMVAGDIYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+Q+ +PV++ G E P +IA+ +E+A D+VI+DTAGRL I++ +MDEL
Sbjct: 146 QLQVLGDQLNIPVFSMGQE-NPVKIAQSAVEQANSTGRDLVIIDTAGRLHINEELMDELA 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + P E+LLVVDAMTGQEA + TFN ++G+ G ++TKLDGD+RGGAALSV++V+
Sbjct: 205 NIKSTVRPHEILLVVDAMTGQEAVNVADTFNQKLGLDGIVMTKLDGDARGGAALSVRKVT 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK G GE+++ LEPFYPDRMA RILGMGDVL+ +EKAQ E A ++ KKI A
Sbjct: 265 GTPIKFAGMGEKLDALEPFYPDRMADRILGMGDVLTLIEKAQANFDAEQAAKLNKKIRQA 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE---KSLKIMEAMIEAMTP 297
+F+ DFL+Q + V ++G + +V+GMIPGMGK+T Q+++ + K L +EA+I +MT
Sbjct: 325 DFNLEDFLEQMQQVKKLGPLEQVLGMIPGMGKLT-KQLKDQQLDGKELAQVEAIIYSMTV 383
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER PE + S R+KR+A+ SG Q V+QL+ Q Q R MK +
Sbjct: 384 WERHHPEKIDGS--RKKRIARGSGTRVQDVNQLLKQFEQTRKMMKQI 428
>gi|410667373|ref|YP_006919744.1| signal recognition particle GTPase Ffh [Thermacetogenium phaeum DSM
12270]
gi|409105120|gb|AFV11245.1| signal recognition particle GTPase Ffh [Thermacetogenium phaeum DSM
12270]
Length = 451
Score = 343 bits (881), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 178/353 (50%), Positives = 240/353 (67%), Gaps = 5/353 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S + F+ + PT ILL GLQG GKTT + KLA Y KKQGK +LV DVYRPAAI
Sbjct: 87 MGDTRSGINFSATGPTTILLVGLQGGGKTTTAGKLALYYKKQGKRPLLVGADVYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +L Q+ VP ++ G + P +IA++ +E A++++ D+++VDTAGRL ID+ +M EL+
Sbjct: 147 QLEVLAGQIDVPFFSLGADASPVEIARRAVEHAQRQSQDLILVDTAGRLHIDEELMAELR 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P EV+LVVDAMTGQ+A + F E+G+TG ILTKLDGD+RGGAALSVK V+
Sbjct: 207 SMKEAVEPQEVILVVDAMTGQDAVNVARAFQEELGLTGVILTKLDGDTRGGAALSVKSVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE+++ L+PFYPDRMA RILGMGDVLS +E+AQ QE A E++KK+
Sbjct: 267 GCPIKFVGTGEKLDTLQPFYPDRMAARILGMGDVLSLIERAQSTFDQEKAREIEKKLRRQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG---KITPAQVREAEKSLKIMEAMIEAMTP 297
F DFL+Q V MGS+ +++GM+PG+G ++ Q + K +EAMI +MTP
Sbjct: 327 EFTLEDFLEQIERVRSMGSLEQLLGMLPGVGGAKELRKLQAQFDGKEFVRLEAMINSMTP 386
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EER P ++ S RRKR+A+ SG + Q V++L+ Q R K L V G
Sbjct: 387 EERRNPAIINGS--RRKRIARGSGTSVQDVNRLLKHFEQTRKLFKQLSEVGSG 437
>gi|374997111|ref|YP_004972610.1| signal recognition particle protein [Desulfosporosinus orientis DSM
765]
gi|357215477|gb|AET70095.1| signal recognition particle protein [Desulfosporosinus orientis DSM
765]
Length = 453
Score = 343 bits (881), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 178/344 (51%), Positives = 244/344 (70%), Gaps = 4/344 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG +++ A PTVILL GLQG GKTT +AKLAN LKKQGK +LVA D+YRPAAI
Sbjct: 86 MGGASGKILIASKPPTVILLLGLQGAGKTTHAAKLANMLKKQGKHPLLVACDIYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ VPV++ G E P++IA+ + A + DVVI+DTAGRL I++ +M EL+
Sbjct: 146 QLQVLGEQIKVPVFSMGHE-DPTKIAQASIVHANQNGQDVVIIDTAGRLHINEELMTELR 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + P E+LLVVDAMTGQ+A + +F+ E+G+ G ILTKLDGD+RGG ALS+K V+
Sbjct: 205 EIKSAVKPHEILLVVDAMTGQDAVNVAQSFHSELGLDGVILTKLDGDTRGGGALSIKAVT 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G IK VG GE+M+ +E F+PDRMA RILGMGDVL+ +EKAQE Q+ A+EM++K+
Sbjct: 265 GCTIKFVGIGEKMDAIEAFHPDRMASRILGMGDVLTLIEKAQESFDQKKAKEMEEKLRKH 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F +DFL Q + + +MG +S ++ MIPG+GK V+ EK +EA+I +MT EER
Sbjct: 325 EFTLDDFLDQMQQMKKMGPLSSILEMIPGVGK-QLKDVQIDEKDTARVEAIIRSMTKEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
KP ++ +S R+KR+A+ SG + Q V +L+ Q QM+ MK
Sbjct: 384 RKPVIIKDS--RKKRIAKGSGTSVQDVGRLIKQFEQMQKMMKQF 425
>gi|331701481|ref|YP_004398440.1| signal recognition particle protein [Lactobacillus buchneri NRRL
B-30929]
gi|406027042|ref|YP_006725874.1| signal recognition particle protein [Lactobacillus buchneri CD034]
gi|329128824|gb|AEB73377.1| signal recognition particle protein [Lactobacillus buchneri NRRL
B-30929]
gi|405125531|gb|AFS00292.1| signal recognition particle protein [Lactobacillus buchneri CD034]
Length = 479
Score = 343 bits (881), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 173/363 (47%), Positives = 253/363 (69%), Gaps = 12/363 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MG E L A+ PT+I+++GLQG GKTT + KLA LK +Q +L+A D+YRPAAI
Sbjct: 87 MGEEAVPLNKAEKIPTIIMMSGLQGAGKTTTAGKLALKLKNEQNARPLLIADDIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ VPV++ GT+V P +IAK+G+E+AK+ + D VI+DTAGRLQID+ +MDEL
Sbjct: 147 DQLQTVGQQIDVPVFSLGTDVDPVEIAKRGVEQAKQDHNDYVIIDTAGRLQIDEKLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K + P E+LLV+DAMTGQ A A FN + +TG +LTKLDGD+RGGAALS++ V
Sbjct: 207 SHIKDAVEPNEILLVIDAMTGQNAVATAEGFNKTLDVTGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG+GE+M DL+ FYPDRMA RILGMGD+LS +EK Q+ ++ A+E+ +KI
Sbjct: 267 TQKPIKFVGQGEKMSDLDVFYPDRMASRILGMGDMLSLIEKTQKEYDEKQAQELSEKIQE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE---KSLKIMEAMIEAMT 296
FDFNDF+ Q + +MG + ++ MIPGM Q++ A K + ++A++ +MT
Sbjct: 327 NTFDFNDFVDQLNQIQKMGPLDEIMKMIPGMA--NNPQLKNANMDPKDMDHLKAIVYSMT 384
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 356
+ER P++L +P RR+R+A+ SG+ Q+V++++ Q Q MK +M + G++ +
Sbjct: 385 DQERTDPDVL--NPSRRRRIARGSGRPIQEVNRMIKQFGQ----MKTMMNKVSKGNMSGM 438
Query: 357 SNL 359
N+
Sbjct: 439 ENM 441
>gi|385260553|ref|ZP_10038697.1| signal recognition particle protein [Streptococcus sp. SK140]
gi|385191103|gb|EIF38527.1| signal recognition particle protein [Streptococcus sp. SK140]
Length = 521
Score = 343 bits (880), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 174/353 (49%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEDARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRMA RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMASRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDEKQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIAAGSGNTFIEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|421489046|ref|ZP_15936434.1| signal recognition particle protein [Streptococcus oralis SK304]
gi|400368263|gb|EJP21278.1| signal recognition particle protein [Streptococcus oralis SK304]
Length = 523
Score = 343 bits (880), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 168/347 (48%), Positives = 245/347 (70%), Gaps = 4/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN+++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNVQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
FDFNDF+ Q V MG M ++ MIPGM + Q ++ E+ + A++ +MTPE
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMANNSALQNMKVDERQIARKRAIVSSMTPE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM 345
ERE P+LL +P RR+R+A SG T +V++ + Q + M+ +M
Sbjct: 387 ERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQGIM 431
>gi|323344206|ref|ZP_08084432.1| signal recognition particle protein [Prevotella oralis ATCC 33269]
gi|323094935|gb|EFZ37510.1| signal recognition particle protein [Prevotella oralis ATCC 33269]
Length = 449
Score = 343 bits (880), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 185/365 (50%), Positives = 247/365 (67%), Gaps = 13/365 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE +EL + RP ++L++GLQG GKTT S KLAN LK KQ ++ +LVA DVYRPAAI
Sbjct: 86 MGGEAAELKLS-GRPAIVLMSGLQGSGKTTFSGKLANMLKSKQKRNPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ++GEQVGVPVY+ +IA ++EAK K DVVIVDTAGRL ID+ MM E+
Sbjct: 145 DQLKVVGEQVGVPVYSEPDSKNVIEIATHAVKEAKAKGNDVVIVDTAGRLAIDEEMMTEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++K LNP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 SELKNALNPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+ME ++ F+P RMA RILGMGD++S VE+AQE +E+A ++QKKI
Sbjct: 265 VTKPIKFVGTGEKMEAIDVFHPSRMADRILGMGDIVSLVERAQEQFDEEEARKLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + GMIPG+GK + + + K +EA+I +MTP+E
Sbjct: 325 NKFDFNDFLNQIEQIKKMGNLKDLAGMIPGVGK-AIKDIDIDDDAFKGVEAIIRSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMGVMEGG 351
R PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK +M M+G
Sbjct: 384 RSNPEMLNTS--RRQRIAKGSGTNIQEVNRLIKQFDQTRKMMKMVTGNQMAGMMSRMKGM 441
Query: 352 SLPAL 356
+P +
Sbjct: 442 KMPGM 446
>gi|147678059|ref|YP_001212274.1| signal recognition particle GTPase [Pelotomaculum thermopropionicum
SI]
gi|146274156|dbj|BAF59905.1| signal recognition particle GTPase [Pelotomaculum thermopropionicum
SI]
Length = 450
Score = 343 bits (880), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 184/371 (49%), Positives = 246/371 (66%), Gaps = 14/371 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S++ A PTVI++ GL G GKTT SAKLANYL+KQG+ +LVA DVYRPAA+
Sbjct: 87 MGGSNSKINMAPKPPTVIMMVGLNGAGKTTTSAKLANYLRKQGRRPLLVAADVYRPAAVK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+G+PV+ GT +P I E A DVVI+DTAGR ++++ +M EL+
Sbjct: 147 QLQVLGEQLGIPVFADGTGKEPVSIGLAAAESAVTGGRDVVIIDTAGRQEVNEELMAELE 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P EVLLVVDAMTGQ A + TFN +G+ G ILTKLDGD+RGGAALSV+ V+
Sbjct: 207 AMKEAIRPHEVLLVVDAMTGQAAVGVAETFNSRLGLDGVILTKLDGDTRGGAALSVRAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK G GE+++ LEPF+PDRMA RILGMGDVL+ +EKAQE E MQKKI S
Sbjct: 267 GKPIKFAGLGEKLDALEPFHPDRMAERILGMGDVLTLIEKAQENFNAEQMARMQKKIRSM 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEE 299
F DFL+Q V ++G + +++ MIPG+G I + ++ EK L +EA+I +MTPEE
Sbjct: 327 EFTLEDFLEQLTQVKKLGPLEQILSMIPGLGGIKKLKDIQVDEKELVYVEAIIRSMTPEE 386
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 359
R PE + R++R+A+ SG + Q+V++L+ Q Q + MK + ++
Sbjct: 387 RRDPERVLNGS-RKRRIAKGSGTSVQEVNRLLKQFEQTKKMMKQFV------------DM 433
Query: 360 EDALKSEQKAP 370
E ALK K P
Sbjct: 434 EKALKKSGKMP 444
>gi|251797472|ref|YP_003012203.1| signal recognition particle protein [Paenibacillus sp. JDR-2]
gi|247545098|gb|ACT02117.1| signal recognition particle protein [Paenibacillus sp. JDR-2]
Length = 462
Score = 343 bits (880), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 174/346 (50%), Positives = 242/346 (69%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S+L A PTVI++ GLQG GKTT +AKLA L+K +LVA D+YRPAAI
Sbjct: 88 MGGTQSKLAKANKPPTVIMMVGLQGAGKTTTTAKLAKLLQKGNSKPLLVACDIYRPAAIK 147
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ PV++ G + P +IAK GL A++ + D VI DTAGRL ID+A+M+ELK
Sbjct: 148 QLQVLGEQINAPVFSLGDQTSPVEIAKAGLAHARENHNDYVIFDTAGRLHIDEALMEELK 207
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+ + + P EVLLVVDAMTGQ+A + +F+ ++ +TG +LTKLDGD+RGGAALSVK V+
Sbjct: 208 QIHQNVKPDEVLLVVDAMTGQDAVNVAQSFHEQLELTGVVLTKLDGDTRGGAALSVKAVT 267
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK GE+++ LEPF+PDRMA RILGMGD+LS +EKAQ + + A EM++K+ +A
Sbjct: 268 GKPIKFAAMGEKIDALEPFHPDRMASRILGMGDMLSLIEKAQANIDADKAAEMERKMRTA 327
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI--TPAQVREAEKSLKIMEAMIEAMTPE 298
F F+DFL+Q + +G + +++ M+PGM K+ ++ EK + +EA++ +MT
Sbjct: 328 EFTFDDFLEQMAQIRNLGPLDQLMDMLPGMNKMKGNMKDMKVDEKQINRVEAIVRSMTKA 387
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E++KPELL S RRKRVA SG + +V++L+ Q MR MK
Sbjct: 388 EKQKPELLNHS--RRKRVAAGSGTSITEVNRLIKQFEDMRKMMKQF 431
>gi|421277208|ref|ZP_15728028.1| signal recognition particle protein [Streptococcus mitis SPAR10]
gi|395876489|gb|EJG87565.1| signal recognition particle protein [Streptococcus mitis SPAR10]
Length = 521
Score = 343 bits (880), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 174/353 (49%), Positives = 245/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEDARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVIDAMIGQEAANVAREFNDQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRMA RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMASRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDEKQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIAAGSGNTFIDVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|375008167|ref|YP_004981800.1| Signal recognition particle [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|359287016|gb|AEV18700.1| Signal recognition particle [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 446
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 170/336 (50%), Positives = 244/336 (72%), Gaps = 4/336 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAI 59
MGGE S++ AK PTV+++ GLQG GKTT + KLAN L+K + +LVA DVYRPAAI
Sbjct: 87 MGGEQSKIAVAKKPPTVVMMVGLQGAGKTTTTGKLANLLRKRHNRKPLLVAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ VPV++ G + P +IAKQ LE AK+++ D V++DTAGRL ID+A+MDEL
Sbjct: 147 KQLETLGKQLNVPVFSLGEDANPVEIAKQALERAKEEHYDYVLIDTAGRLHIDEALMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K + P E+ LVVDAMTGQ+A + +F+ ++GITG ILTKLDGD+RGGAALS++ V
Sbjct: 207 KQMKEAVKPDEIFLVVDAMTGQDAVNVAQSFHEQLGITGVILTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PIK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TGAPIKFAGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQAAVDEEKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
A F +DFL Q V ++G + ++ M+PG KI + ++ EK + +EA+I +MT E
Sbjct: 327 ATFTLDDFLDQLGQVRKLGPLDEILKMLPGANKIKGLSNIQVDEKQIARVEAIIRSMTKE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
E+ PE++ S R++R+A+ SG T Q V++L+ Q
Sbjct: 387 EKMHPEIINAS--RKRRIAKGSGTTVQDVNRLLKQF 420
>gi|419815224|ref|ZP_14339869.1| signal recognition particle protein, partial [Streptococcus sp.
GMD2S]
gi|404468938|gb|EKA13791.1| signal recognition particle protein, partial [Streptococcus sp.
GMD2S]
Length = 412
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + SE++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 47 LGSDTSEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 106
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 107 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNEL 166
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 167 RDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 226
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 227 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 286
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 287 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 345
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 346 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 393
>gi|417935776|ref|ZP_12579093.1| signal recognition particle protein [Streptococcus infantis X]
gi|343402685|gb|EGV15190.1| signal recognition particle protein [Streptococcus infantis X]
Length = 476
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 174/353 (49%), Positives = 245/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 42 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEDARPLMIAADIYRPAAI 101
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL
Sbjct: 102 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDELLMNEL 161
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 162 RDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 221
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRMA RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 222 TGKPIKFTGTGEKITDIETFHPDRMASRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 281
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ EK + A++ +MTP
Sbjct: 282 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDEKQIARKRAIVSSMTP 340
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T V++ + Q + M+ GVM G
Sbjct: 341 EERENPDLL--TPSRRRRIAAGSGNTFIDVNKFIKDFNQAKQLMQ---GVMSG 388
>gi|340355026|ref|ZP_08677720.1| signal recognition particle protein [Sporosarcina newyorkensis
2681]
gi|339622823|gb|EGQ27336.1| signal recognition particle protein [Sporosarcina newyorkensis
2681]
Length = 451
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 174/348 (50%), Positives = 254/348 (72%), Gaps = 8/348 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + FA+ PTVI++ GLQG GKTT + KLA L KK K+ +LVA D+YRPAAI
Sbjct: 87 MGGEQNPIQFARKSPTVIMMVGLQGAGKTTTTGKLATVLRKKHNKNPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ GT+ P +IA++ +EEA+K++ DVVI+DTAGRL +D+ +M EL
Sbjct: 147 QQLETLGKQISIPVFSMGTDQSPVEIARRAMEEAEKEHNDVVIIDTAGRLHVDEKLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
KD++ + P EV LVVDAMTGQ+A + +F+ IGITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KDIRELTKPDEVFLVVDAMTGQDAVNVAKSFDEMIGITGVVLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG GE+M+ LEPF+P+RMA RILGMGDV+S +EKAQE + +E A+E+++K+ +
Sbjct: 267 TEKPIKFVGMGEKMDALEPFHPERMASRILGMGDVMSLIEKAQENVDEEKAKELEQKLRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMT 296
+F +DFL Q + V +MG + ++ M+PG KI A+V E + + +EA+I +MT
Sbjct: 327 QSFTLDDFLDQLQQVKKMGPLDEILKMMPGANKIKGLDNAKVDEGQ--MGRVEAVIYSMT 384
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ERE P+++ S R+KR+A SG + Q+V++L+ Q +M+ +K +
Sbjct: 385 LAERESPDIINAS--RKKRIAVGSGTSIQEVNRLLKQFEEMKKMVKQM 430
>gi|222528961|ref|YP_002572843.1| signal recognition particle protein [Caldicellulosiruptor bescii
DSM 6725]
gi|222455808|gb|ACM60070.1| signal recognition particle protein [Caldicellulosiruptor bescii
DSM 6725]
Length = 443
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 173/344 (50%), Positives = 238/344 (69%), Gaps = 2/344 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG ++L F+ S + ++ GLQG GKTT + KLA LK+QGK+ +LVA D+YRPAAI
Sbjct: 86 LGGSDTKLTFSPSGFSTYMMVGLQGSGKTTTAGKLAGLLKRQGKNPLLVACDIYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++ ++VGV + +IAK+G+E AK DV IVDTAGRL I++ +MDEL
Sbjct: 146 QLEVVAQKVGVKCFADYNSKDAVKIAKEGIEFAKVSRCDVAIVDTAGRLHINQELMDELV 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + PTE+LLV+DAMTGQ+A + FN ++GI G I+TKLDGD+RGGAALSVK ++
Sbjct: 206 AIKNAIKPTEILLVLDAMTGQDAVNVAAAFNEQLGIDGIIMTKLDGDTRGGAALSVKAIT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK G GE+MEDLE F+PDRMA RILGMGD+L+ +EKAQE + Q+ AEE++KK+ S
Sbjct: 266 GKPIKFAGVGEKMEDLEAFHPDRMASRILGMGDILTLIEKAQEAIDQKKAEELEKKLRSM 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F DFL Q + + +MGS+S++I MIPG+ EK LK +EA+I +MT EER
Sbjct: 326 QFTLEDFLDQLKQIKKMGSLSQIISMIPGVKLKGDVDFDAGEKELKKIEAIINSMTKEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+ P ++ S R++R+A SG T Q V++L+ Q M+ MK
Sbjct: 386 QDPSIINSS--RKRRIAMGSGTTVQDVNRLLRQFEDMKRMMKQF 427
>gi|325680130|ref|ZP_08159696.1| signal recognition particle protein [Ruminococcus albus 8]
gi|324108205|gb|EGC02455.1| signal recognition particle protein [Ruminococcus albus 8]
Length = 457
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 171/347 (49%), Positives = 243/347 (70%), Gaps = 4/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S++ F P VI++ GLQG GKTT +AKLA K+QG +L+A DVYRPAAID
Sbjct: 87 MGEANSKINFPSKPPCVIMMCGLQGSGKTTHAAKLAKMFKRQGNRPLLIAADVYRPAAID 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL I+ E+ VPV+ G ++ P +I KQGL++AK D+VI+DTAGRL ID+ +MDELK
Sbjct: 147 QLKIVAEKADVPVFEMG-QIDPRKIVKQGLKQAKDYGNDLVIIDTAGRLHIDEELMDELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K++ P+E++LVVDAM GQ+A + ++F+ +GI ILTKLD D+RGGAALSV V+
Sbjct: 206 DIKKIAEPSEIMLVVDAMIGQDAVKVASSFDEALGIDSVILTKLDSDTRGGAALSVLAVT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GE++++ EPF+P+RMA RILGMGD+L+ +E+A + + +E+AE++ KK+ S
Sbjct: 266 GKPIKFVGMGEKLDEFEPFHPERMASRILGMGDMLTLIERATQTVDEEEAEKLAKKLQSE 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FD ND L Q + + +MGS+ +I M+PG KIT + E +L+ EAMI +MT ER
Sbjct: 326 GFDLNDLLDQMKQIQKMGSVKSIIQMLPGANKITDEDLESGEAALRKTEAMINSMTKAER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
+P+++ P R++R+A SG V+QL+ Q M+ MK MG+
Sbjct: 386 ARPQII--DPKRKRRIAAGSGTQVSDVNQLLKQYDAMKKMMKE-MGI 429
>gi|260912277|ref|ZP_05918828.1| signal recognition particle protein Ffh [Prevotella sp. oral taxon
472 str. F0295]
gi|260633578|gb|EEX51717.1| signal recognition particle protein Ffh [Prevotella sp. oral taxon
472 str. F0295]
Length = 450
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 182/347 (52%), Positives = 241/347 (69%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE L K+RP +IL++GLQG GKTT S KLAN LK KQ K+ +LVA DVYRPAAI
Sbjct: 86 MGGESVGLQL-KNRPAIILMSGLQGSGKTTFSGKLANLLKSKQHKNPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL ++ +QVGV VY+ +IA + EAK K DVVIVDTAGRL +D+ MMDE+
Sbjct: 145 EQLKVVAQQVGVSVYSEPDNKNVVEIANNAIREAKSKGNDVVIVDTAGRLAVDEEMMDEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K+ LNP E L VVD+MTGQ+A FN + I G +LTKLDGD+RGGAALS++ V
Sbjct: 205 YRLKQALNPDETLFVVDSMTGQDAVNTAREFNDRLDIDGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+ME ++ F+P+RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VTKPIKFVGTGEKMEAIDVFHPERMADRILGMGDIVSLVERAQEQFDEEEAKRLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFLKQ + +MG++ + MIPG+GK V + + K +EA+I++MTP+E
Sbjct: 325 NKFDFNDFLKQIEQIKKMGNLKDLASMIPGVGKAIK-DVDIDDNAFKGIEAIIKSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 384 RTNPEILNNS--RRQRIAKGSGTNIQEVNKLIKQFDQTRKMMKMMTG 428
>gi|339009345|ref|ZP_08641917.1| signal recognition particle protein [Brevibacillus laterosporus LMG
15441]
gi|338773823|gb|EGP33354.1| signal recognition particle protein [Brevibacillus laterosporus LMG
15441]
Length = 480
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 176/368 (47%), Positives = 250/368 (67%), Gaps = 12/368 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG VS+L + PTVI++ GLQG GKTT + KLA L+KQ + MLVA D+YRPAAI
Sbjct: 87 MGGNVSKLAVSNRPPTVIMMVGLQGAGKTTTTGKLAKLLQKQNRKPMLVACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ PV+ G +V P +IA + +E AK+ + D VI+DTAGRL ID+ +M+EL+
Sbjct: 147 QLQVLGEQLSAPVFAMGDQVSPVEIATKAIEHAKENHYDYVILDTAGRLHIDETLMEELQ 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
V+ V P E+LLVVDAMTGQ+A + +FN ++ +TG ILTKLDGD+RGGAALSVK V+
Sbjct: 207 QVREVAKPDEILLVVDAMTGQDAVNVAESFNNQLELTGVILTKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK GE+++ LEPF+PDRMA RILGMGDVLS +EKAQE + + A+EM++++
Sbjct: 267 GKPIKFAAMGEKLDALEPFHPDRMASRILGMGDVLSLIEKAQESVDVDKAKEMERQMRQG 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEE 299
F F+ FL + + ++G + ++GM+PGM K+ + ++ EK + EA++++MT EE
Sbjct: 327 EFTFDMFLDSMQQMRQLGPLEDLLGMLPGMNKMKGMKDLKVDEKQIARTEAIVKSMTKEE 386
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME---------G 350
R P+++ + RRKR+A SG T Q+V++ + Q M+ MK G+ + G
Sbjct: 387 RANPDIMNAN--RRKRIAAGSGTTIQEVNRFIKQFEDMKKMMKQFTGMTDKMKKKSKKKG 444
Query: 351 GSLPALSN 358
G P N
Sbjct: 445 GFFPFKGN 452
>gi|421872835|ref|ZP_16304452.1| signal recognition particle protein [Brevibacillus laterosporus
GI-9]
gi|372458250|emb|CCF14001.1| signal recognition particle protein [Brevibacillus laterosporus
GI-9]
Length = 480
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 176/368 (47%), Positives = 250/368 (67%), Gaps = 12/368 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG VS+L + PTVI++ GLQG GKTT + KLA L+KQ + MLVA D+YRPAAI
Sbjct: 87 MGGNVSKLAVSNRPPTVIMMVGLQGAGKTTTTGKLAKLLQKQNRKPMLVACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ PV+ G +V P +IA + +E AK+ + D VI+DTAGRL ID+ +M+EL+
Sbjct: 147 QLQVLGEQLSAPVFAMGDQVSPVEIATKAIEHAKENHYDYVILDTAGRLHIDETLMEELQ 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
V+ V P E+LLVVDAMTGQ+A + +FN ++ +TG ILTKLDGD+RGGAALSVK V+
Sbjct: 207 QVREVAKPDEILLVVDAMTGQDAVNVAESFNNQLELTGVILTKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK GE+++ LEPF+PDRMA RILGMGDVLS +EKAQE + + A+EM++++
Sbjct: 267 GKPIKFAAMGEKLDALEPFHPDRMASRILGMGDVLSLIEKAQESVDVDKAKEMERQMRQG 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEE 299
F F+ FL + + ++G + ++GM+PGM K+ + ++ EK + EA++++MT EE
Sbjct: 327 EFTFDMFLDSMQQMRQLGPLEDLLGMLPGMNKMKGMKDLKVDEKQIARTEAIVKSMTKEE 386
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME---------G 350
R P+++ + RRKR+A SG T Q+V++ + Q M+ MK G+ + G
Sbjct: 387 RANPDIMNAN--RRKRIAAGSGTTIQEVNRFIKQFEDMKKMMKQFTGMTDKMKKKSKKKG 444
Query: 351 GSLPALSN 358
G P N
Sbjct: 445 GFFPFKGN 452
>gi|383812645|ref|ZP_09968078.1| signal recognition particle protein [Prevotella sp. oral taxon 306
str. F0472]
gi|383354702|gb|EID32253.1| signal recognition particle protein [Prevotella sp. oral taxon 306
str. F0472]
Length = 451
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 180/347 (51%), Positives = 240/347 (69%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE L SRP +IL++GLQG GKTT S KLAN LK K+ K+ +LVA DVYRPAAI
Sbjct: 86 MGGESVGLNLT-SRPAIILMSGLQGSGKTTFSGKLANMLKTKEHKNPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ++GEQVGVPVY+ ++IA L EAK K DVVI+DTAGRL +D+ MM+E+
Sbjct: 145 DQLKVVGEQVGVPVYSEPESKNVNEIADHALAEAKAKGYDVVIIDTAGRLAVDEEMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K +NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 ESLKNHVNPDETLFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A+ +QKKI
Sbjct: 265 VTKPIKFIGTGEKMEAIDVFHPGRMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP E
Sbjct: 325 NQFDFNDFYNQIQQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIEAIIQSMTPRE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R PE+L S RR+R+A+ SG + Q+V++L+ Q Q R MK + G
Sbjct: 384 RTNPEVLNNS--RRQRIAKGSGTSLQEVNRLIKQFDQTRKMMKMVTG 428
>gi|441499573|ref|ZP_20981753.1| Signal recognition particle, subunit Ffh SRP54 [Fulvivirga
imtechensis AK7]
gi|441436656|gb|ELR70020.1| Signal recognition particle, subunit Ffh SRP54 [Fulvivirga
imtechensis AK7]
Length = 458
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 181/359 (50%), Positives = 239/359 (66%), Gaps = 7/359 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG E + + P VIL++GLQG GKTT S KLANYLK QG+ +L A D+YRPAAID
Sbjct: 101 MGGR-HEDIDIEGNPAVILISGLQGSGKTTFSGKLANYLKGQGRQVLLTACDIYRPAAID 159
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ V VY +IA ++ AK N +VIVDTAGRL +D+ MMDE+
Sbjct: 160 QLKVLGEQIKVDVYAEPENKDAVKIANNAIKYAKDNNKKIVIVDTAGRLAVDEEMMDEIT 219
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K+ LNP+E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAA+S++ V
Sbjct: 220 RLKQALNPSETLFVVDSMTGQDAVNTAKAFNDRLNFDGVVLTKLDGDTRGGAAISIRRVV 279
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK + GE+M+ ++ F+PDRMA RILGMGDV+S VEKAQ+ +E+A + KKI
Sbjct: 280 DKPIKFISTGEKMDAIDKFHPDRMANRILGMGDVVSLVEKAQQTFDEEEARRLNKKIRKN 339
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDFL Q + +MG++ ++GMIPGMGK + + S K +EA+I +MT EER
Sbjct: 340 QFDFNDFLSQLEQIKKMGNIKDLMGMIPGMGKALKG-IDVDDDSFKPIEAIIRSMTNEER 398
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS--LPALS 357
E+PEL+ S RRKR+A SG + Q+V+ L+ Q M+ MK M M GG L AL+
Sbjct: 399 EQPELINGS--RRKRIATGSGTSVQEVNNLLKQFNDMKKLMKT-MNKMGGGKKGLAALN 454
>gi|260591562|ref|ZP_05857020.1| signal recognition particle protein [Prevotella veroralis F0319]
gi|260536593|gb|EEX19210.1| signal recognition particle protein [Prevotella veroralis F0319]
Length = 451
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 179/347 (51%), Positives = 241/347 (69%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE L +RP +IL++GLQG GKTT S KLAN LK K+ K+ +LVA DVYRPAAI
Sbjct: 86 MGGEAVGLNLT-NRPAIILMSGLQGSGKTTFSGKLANMLKTKEHKNPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ++GEQVGVPVY+ ++IA L EAK K DVVI+DTAGRL +D+ MM+E+
Sbjct: 145 DQLKVVGEQVGVPVYSELENKNVNEIADHALAEAKAKGCDVVIIDTAGRLAVDEEMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K +NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 ESLKNHVNPDETLFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A+ +QKKI
Sbjct: 265 VTKPIKFIGTGEKMEAIDVFHPGRMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP+E
Sbjct: 325 NQFDFNDFYNQIQQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIEAIIQSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R PE+L S RR+R+A+ SG + Q+V++L+ Q Q R MK + G
Sbjct: 384 RTNPEVLNNS--RRQRIAKGSGTSLQEVNRLIKQFDQTRKMMKMVTG 428
>gi|308068626|ref|YP_003870231.1| signal recognition particle protein [Paenibacillus polymyxa E681]
gi|305857905|gb|ADM69693.1| Signal recognition particle protein [Paenibacillus polymyxa E681]
Length = 458
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 172/363 (47%), Positives = 251/363 (69%), Gaps = 5/363 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG ++L A PTVI++ GLQG GKTT S KLA L+KQ +LVAGD+YRPAAI
Sbjct: 87 MGGSQAKLAKANKPPTVIMMVGLQGAGKTTTSGKLAKLLQKQNHRPLLVAGDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ PV+T G + P +IAKQGL+ AK D VI+DTAGRL +D+ +M+EL+
Sbjct: 147 QLQVLGEQINTPVFTLGDQTSPVEIAKQGLQHAKDNGNDYVIIDTAGRLHVDEELMEELR 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+ + P EVLLVVD+MTGQ+A + FN + +TG +LTKLDGD+RGGAALSVK V+
Sbjct: 207 QIHTNVKPDEVLLVVDSMTGQDAVNVAEHFNSSLELTGVVLTKLDGDTRGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK GE+++ +EPF+P+RMA RILGMGD+LS +EKAQ + + A+EM++K+ +A
Sbjct: 267 GCPIKFATLGEKLDAMEPFHPERMASRILGMGDMLSLIEKAQSNIDADKAKEMERKMRNA 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEE 299
F F DFL+Q V ++G + +++ MIPGMG + + ++ +K + +EA++ +MT +E
Sbjct: 327 EFTFEDFLEQMDQVKKLGPIDQILDMIPGMGNMKQMKDIKVDDKQMGRIEAIVHSMTTQE 386
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM--EGGSLPALS 357
++ P+++ S RRKR++ SG + +V++L+ Q +MR MK +M +GG A+
Sbjct: 387 KQNPDMINHS--RRKRISVGSGTSLAEVNRLIKQFDEMRRMMKQFSDMMGPKGGKNKAMK 444
Query: 358 NLE 360
L+
Sbjct: 445 QLK 447
>gi|332981635|ref|YP_004463076.1| signal recognition particle subunit FFH/SRP54 (srp54) [Mahella
australiensis 50-1 BON]
gi|332699313|gb|AEE96254.1| signal recognition particle subunit FFH/SRP54 (srp54) [Mahella
australiensis 50-1 BON]
Length = 438
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 172/351 (49%), Positives = 248/351 (70%), Gaps = 3/351 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S++ +A + PTVI++ GLQG GKTT SAKLA YL KQGK+ +LVA D+YRPAA+
Sbjct: 82 MGSSQSKIKWASAPPTVIMMVGLQGSGKTTTSAKLAGYLAKQGKNPLLVACDIYRPAAVK 141
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL I+G++V +PV++ P I++Q LE AKK + DVVI+DTAGRL ID MM EL+
Sbjct: 142 QLQIVGQKVNIPVFSL-EGANPVAISQQALEYAKKHSNDVVILDTAGRLHIDDEMMQELE 200
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K ++P E+LLVVDAMTGQ+A + FN + I G +LTKLDGD+RGGAALSVK V+
Sbjct: 201 DIKSSVHPDEILLVVDAMTGQDAVNVAKNFNERLAIDGVVLTKLDGDTRGGAALSVKAVT 260
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GE+++DLEPF+PDR+A RILGMGDVL+ +EKAQ + ++ A E++ K+ +
Sbjct: 261 GKPIKFVGMGEKLDDLEPFHPDRIASRILGMGDVLTLIEKAQAAVDEKKAMELENKLRNQ 320
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F DFL Q + +MG +S+++ M+PG+ +++ +K L +EA+I +MT +ER
Sbjct: 321 QFTLEDFLDQLHEIKKMGPLSQIMDMLPGINAKKMGKIQVDDKELGRIEAIINSMTKQER 380
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 351
+P ++ S RR+R+A+ SG T Q+V++L+ Q + + M+ + + G
Sbjct: 381 REPAIINGS--RRRRIAKGSGTTIQEVNRLLKQFEETKRLMRQFTSMEKSG 429
>gi|326204801|ref|ZP_08194655.1| signal recognition particle protein [Clostridium papyrosolvens DSM
2782]
gi|325985013|gb|EGD45855.1| signal recognition particle protein [Clostridium papyrosolvens DSM
2782]
Length = 436
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 172/336 (51%), Positives = 237/336 (70%), Gaps = 2/336 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+G E S++ FA PT+ ++AGLQG GKTT + KLAN L+KQGK+ +LVA DVYRPAAI
Sbjct: 88 LGREQSKVTFASKPPTIFMMAGLQGAGKTTTAGKLANLLRKQGKNPLLVACDVYRPAAIK 147
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG Q+ +PV+T P QIAK+ + A+KK D+VI+DTAGRL ID+ +MDEL
Sbjct: 148 QLQVLGNQLNIPVFTLEDNQNPVQIAKEAVSFAEKKQHDLVIIDTAGRLHIDEKLMDELL 207
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + P E+LLVVD+MTGQ+A + TFN ++GI G +LTKLDGD+RGGAALSVK V+
Sbjct: 208 NIKNSVKPHEILLVVDSMTGQDAVNVSETFNKKLGIDGVVLTKLDGDTRGGAALSVKSVT 267
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK GE++ D+EPF+PDRMA RILGMGDVLS +EKAQE ++ A E++KK+ +
Sbjct: 268 GKPIKFAAMGEKLNDIEPFFPDRMASRILGMGDVLSLIEKAQEAYDEKKAIELEKKMRTM 327
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F DFL Q + + +MG + ++GM+PG+ + EK + EA+I++MT +ER
Sbjct: 328 TFTLEDFLDQMQQIKKMGPIGDLLGMMPGVDSKALKDIDIDEKQMGRTEAIIQSMTRKER 387
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 336
P ++ S RRKR++ SG T Q+V+ L+ Q Q
Sbjct: 388 LDPSIINGS--RRKRISAGSGTTIQEVNALLKQFEQ 421
>gi|288924926|ref|ZP_06418862.1| signal recognition particle protein [Prevotella buccae D17]
gi|288338116|gb|EFC76466.1| signal recognition particle protein [Prevotella buccae D17]
Length = 447
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 181/347 (52%), Positives = 240/347 (69%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE + LV K+RP +IL++GLQG GKTT S KLAN LK K+ K+ +LVA DVYRPAAI
Sbjct: 86 MGGEDAPLVL-KNRPAIILMSGLQGSGKTTFSGKLANMLKTKEHKNPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ++GEQVGVPVY IA L+EAK KN DVVI+DTAGRL +D+ MM E+
Sbjct: 145 DQLKVVGEQVGVPVYAEPDNKDVIAIAANALKEAKAKNYDVVIIDTAGRLAVDEQMMTEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++K+ ++P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 SNLKQAVSPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A +QKKI
Sbjct: 265 VTKPIKFIGTGEKMEAIDVFHPARMADRILGMGDVVSLVERAQEQFDEEEARRLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK V + + K +E++I++MTP+E
Sbjct: 325 NQFDFNDFLNQIEQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIESIIKSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R PE+L S RR+R+A+ SG Q V++L+ Q Q R MK + G
Sbjct: 384 RSNPEILNSS--RRQRIAKGSGTNIQDVNRLIKQFDQTRKMMKMVTG 428
>gi|317129234|ref|YP_004095516.1| signal recognition particle protein [Bacillus cellulosilyticus DSM
2522]
gi|315474182|gb|ADU30785.1| signal recognition particle protein [Bacillus cellulosilyticus DSM
2522]
Length = 449
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 167/349 (47%), Positives = 254/349 (72%), Gaps = 4/349 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTV+++ GLQG GKTT + KLAN+L KK + ++VA D+YRPAAI
Sbjct: 87 MGGEQSKIAVASKPPTVVMMVGLQGAGKTTTTGKLANHLRKKHNRKPLMVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAK +E+AK+++ D V++DTAGRL +D+ +M EL
Sbjct: 147 KQLETLGKQLDMPVFSMGDQVSPVEIAKNAMEKAKEEHHDYVLIDTAGRLHVDEELMGEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+++K + +P E+LLVVDAMTGQ+A + +FN +GITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 EEIKALTSPDEILLVVDAMTGQDAVNVAESFNERLGITGVVLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ LEPF+PDRMA RILGMGDVL+ +EKAQ + ++ A E++KK++S
Sbjct: 267 TDTPIKFAGMGEKVDALEPFHPDRMASRILGMGDVLTLIEKAQTNVDEKKARELEKKMLS 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+ F+DFL+Q V MG + ++ M+PG GK+ + ++ +K L +EA++++MT
Sbjct: 327 NDITFDDFLEQLNQVKSMGPLDEILSMMPGAGKMKGLKNIQVDDKQLGHIEAIVQSMTKA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
E+E P +L S RR+R+A+ SG + Q+V++L+ Q +M+ MK + G+
Sbjct: 387 EKEDPSILNAS--RRRRIAKGSGTSIQEVNRLIKQFGEMKKMMKQMAGM 433
>gi|313885163|ref|ZP_07818915.1| signal recognition particle protein [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619854|gb|EFR31291.1| signal recognition particle protein [Eremococcus coleocola
ACS-139-V-Col8]
Length = 489
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 175/363 (48%), Positives = 251/363 (69%), Gaps = 11/363 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ--GKSCMLVAGDVYRPAA 58
MGGE L A PTV+++ GLQG GKTT KLA Y+ ++ K +LVAGDVYRPAA
Sbjct: 87 MGGEREPLNMASQPPTVMMMVGLQGAGKTTTVGKLAKYITEELGKKKPLLVAGDVYRPAA 146
Query: 59 IDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDE 118
+DQL +G+Q+G VY GT+V P +IAK+ L++AK VVI+DTAGRL +++ +MDE
Sbjct: 147 VDQLKTIGQQLGFEVYDEGTQVSPVEIAKRALDQAKLNGNQVVIIDTAGRLHVNEELMDE 206
Query: 119 LKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKE 178
L+++K +NP E+LL VDAMTGQ+A + FN + ITG ++TKLDGD+RGGAALS++
Sbjct: 207 LRNIKAAVNPDEILLTVDAMTGQDAVNVADAFNEALDITGVVITKLDGDTRGGAALSIRS 266
Query: 179 VSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIM 238
+ KPIK G+GE+++ LEPFYPDRM+ RILGMGD+++ +EKAQ+ + +AE+M KI
Sbjct: 267 IIDKPIKFTGQGEKLDALEPFYPDRMSSRILGMGDMMTLIEKAQKDFDEAEAEKMAGKIK 326
Query: 239 SANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMT 296
A+FDFNDF+ Q V +MGS+ +I MIPGM KI P + +EK + ++A++++MT
Sbjct: 327 DASFDFNDFVAQMDQVNKMGSIKDIIKMIPGMNKI-PGLDEFDVSEKEMLRVKAIVQSMT 385
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 356
P ERE P+ +++S RR+R+A+ G Q V+QL+ Q Q R +M M G + +
Sbjct: 386 PYERENPDEISQS--RRRRIAKGCGLDLQAVNQLIKQFNQTR----QVMSQMSNGKMSGM 439
Query: 357 SNL 359
+ +
Sbjct: 440 NKM 442
>gi|365853514|ref|ZP_09393781.1| signal recognition particle protein [Lactobacillus parafarraginis
F0439]
gi|363712139|gb|EHL95838.1| signal recognition particle protein [Lactobacillus parafarraginis
F0439]
Length = 478
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 175/362 (48%), Positives = 254/362 (70%), Gaps = 10/362 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MG E L A PT+I+++GLQG GKTT KLA LK +Q +L+A DVYRPAAI
Sbjct: 87 MGEEAVGLNKAPKIPTIIMMSGLQGAGKTTTVGKLALKLKNEQNARPLLIADDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ VPV+ GT+V P +IAKQGL++A++ + D VI+DTAGRLQID+ +MDEL
Sbjct: 147 EQLQTVGQQIDVPVFEMGTDVDPVEIAKQGLKKAQEDHNDYVIIDTAGRLQIDEKLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K++K ++P E+LLV+DAMTGQ A A F+ + +TG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KNIKEAVHPNEILLVIDAMTGQNAVATAEGFDKTLDVTGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG+GE+M DL+ F+PDRMA RILGMGD+LS +EK Q+ ++ A+E+ +KI
Sbjct: 267 TGKPIKFVGQGEKMTDLDVFHPDRMASRILGMGDMLSLIEKTQKEYDEKQAQELSEKIKE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
+FDFNDFL Q + +MG + ++ MIPGM PA V K + ++A+I +MT
Sbjct: 327 NSFDFNDFLDQLDQIQKMGPLDEIMKMIPGMAN-NPAMKNVNMDPKDMDHLKAIIYSMTE 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
+ER P+++ +P RR+R+A+ SG+ Q+V++++ Q Q MK +M + G++ +
Sbjct: 386 QERTDPDIM--NPSRRRRIARGSGRPIQEVNRMIKQFNQ----MKTMMNKVSKGNMSGME 439
Query: 358 NL 359
N+
Sbjct: 440 NM 441
>gi|354559586|ref|ZP_08978833.1| signal recognition particle protein [Desulfitobacterium
metallireducens DSM 15288]
gi|353541223|gb|EHC10692.1| signal recognition particle protein [Desulfitobacterium
metallireducens DSM 15288]
Length = 465
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 175/344 (50%), Positives = 242/344 (70%), Gaps = 4/344 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S++ + PTVILL GLQG GKTT +AKLA LKKQGK ++VA D+YRPAA+
Sbjct: 86 MGSVSSKINISSKPPTVILLVGLQGAGKTTHAAKLATLLKKQGKHPLMVACDIYRPAAVK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ VPV++ E P +IA++ + A + DVVI+DTAGRL I++ +M EL+
Sbjct: 146 QLQVLGEQIKVPVFSIDGE-NPVKIAQESIRHANSQGQDVVIIDTAGRLHINEELMGELR 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K + P E+LLVVDAMTGQ+A + +F+ E+G+ G ILTKLDGD+RGGAALS+K V+
Sbjct: 205 DIKATVRPHEILLVVDAMTGQDAVNVAESFHSELGVDGIILTKLDGDTRGGAALSIKAVT 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK G GE+ME LEPFYP+RMA RILGMGDVL+ +EKAQ ++ A EM++K+
Sbjct: 265 GCPIKFAGIGEKMEALEPFYPERMASRILGMGDVLTLIEKAQSAFDEKQAREMEQKLRKQ 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F +DFL Q + + +MG +S ++ MIPG+GK V+ EK +EA+I +MT EER
Sbjct: 325 EFTLDDFLDQMQQIKKMGPLSSILEMIPGVGK-QLKDVQIDEKDTAHVEAIIRSMTTEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
KP ++ +S R++R+A+ SG + Q+V +L+ Q QM+ MK
Sbjct: 384 RKPAIIKDS--RKRRIAKGSGTSIQEVGRLIKQFEQMQKMMKQF 425
>gi|254974797|ref|ZP_05271269.1| signal recognition particle protein [Clostridium difficile
QCD-66c26]
gi|255092185|ref|ZP_05321663.1| signal recognition particle protein [Clostridium difficile CIP
107932]
gi|260682859|ref|YP_003214144.1| signal recognition particle protein [Clostridium difficile CD196]
gi|260209022|emb|CBA62118.1| signal recognition particle protein [Clostridium difficile CD196]
Length = 452
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 175/368 (47%), Positives = 248/368 (67%), Gaps = 11/368 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S+++ + PT++++ GLQG GKTT + KL Y KKQGK +LVA D+YRPAAI
Sbjct: 87 MGDVQSKVMISSKPPTILMMVGLQGAGKTTTAGKLGGYFKKQGKKPLLVACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++GE++ +PV+ G + P IAK GL A K D+VI+DTAGRL ID+ +M ELK
Sbjct: 147 QLQVVGEKLDIPVFNMGDKENPVNIAKAGLSHAIKNANDLVIIDTAGRLHIDEVLMAELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E+LLVVD+MTGQ+A + +FN +G+ G +LTKLDGD+RGGAALS++ V+
Sbjct: 207 SIKSEVKPHEILLVVDSMTGQDAVNVAESFNEALGVDGVVLTKLDGDTRGGAALSIRAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK +G GE+++D+EPF+PDRMA RILGMGDVLS +EKAQE + E A+E+++KI
Sbjct: 267 QKPIKFMGMGEKLDDIEPFHPDRMASRILGMGDVLSLIEKAQENIDLEKAKELEQKIKKQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPE 298
DF DFL+Q + MG + +++GMIPGMG + V K +K +A+I++MT
Sbjct: 327 ELDFEDFLQQMEQIQNMGPLDKILGMIPGMGNVKDQLGDVDLNGKEMKRTKAIIQSMTTY 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG-------G 351
ER P +L S R+KR+A+ SG + Q V++L+ QL +M+ MK G + G
Sbjct: 387 ERRNPGVLNAS--RKKRIAKGSGTSVQDVNRLIKQLNEMKKMMKMFAGSQKSMKKRGGLG 444
Query: 352 SLPALSNL 359
LP L+ +
Sbjct: 445 GLPFLNKI 452
>gi|335357213|ref|ZP_08549083.1| Signal recognition particle protein [Lactobacillus animalis KCTC
3501]
Length = 475
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 176/362 (48%), Positives = 249/362 (68%), Gaps = 10/362 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MG E + L + PTVI++ GLQG GKTT + K+A LK +Q +++A DVYRPAA+
Sbjct: 87 MGEEATPLNKSPKIPTVIMMVGLQGAGKTTTAGKMAKRLKDEQNARPLMIAADVYRPAAV 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G ++ VPV+ GT+V P QI KQG+E AK+K D VI+DTAGRLQID+ +MDEL
Sbjct: 147 DQLKTIGRELDVPVFEMGTDVDPVQIVKQGMELAKEKKNDYVIIDTAGRLQIDERLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++K + P E+LL VDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAALS++ V
Sbjct: 207 VNIKELAQPNEILLTVDAMTGQNAVEVAQGFNDQLDVTGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK +G+GE+M L+ FYPDRMA RILGMGD+L+ +EKAQ+ ++ AEE+ K+
Sbjct: 267 TGKPIKFIGQGEKMTALDVFYPDRMASRILGMGDMLTLIEKAQKDFDEKKAEELADKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
+FDFNDFL Q V MG + ++ MIPGM PA ++ K ++ +A++ +MTP
Sbjct: 327 NSFDFNDFLDQLEQVQNMGPIEDIMKMIPGMAN-NPALKNIKVDPKDMEHTKAIVYSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
+ERE P+LL +P RR+R+A SG+ Q+V++++ Q QMR ++M M G+ +
Sbjct: 386 QEREDPDLL--NPSRRRRIAAGSGRPIQEVNRMIKQFKQMR----DMMQKMSKGNFSGME 439
Query: 358 NL 359
L
Sbjct: 440 GL 441
>gi|255313924|ref|ZP_05355507.1| signal recognition particle protein [Clostridium difficile
QCD-76w55]
gi|255516603|ref|ZP_05384279.1| signal recognition particle protein [Clostridium difficile
QCD-97b34]
gi|255649703|ref|ZP_05396605.1| signal recognition particle protein [Clostridium difficile
QCD-37x79]
gi|260686457|ref|YP_003217590.1| signal recognition particle protein [Clostridium difficile R20291]
gi|384360448|ref|YP_006198300.1| signal recognition particle protein [Clostridium difficile BI1]
gi|260212473|emb|CBE03380.1| signal recognition particle protein [Clostridium difficile R20291]
Length = 450
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 171/348 (49%), Positives = 241/348 (69%), Gaps = 4/348 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S+++ + PT++++ GLQG GKTT + KL Y KKQGK +LVA D+YRPAAI
Sbjct: 87 MGDVQSKVMISSKPPTILMMVGLQGAGKTTTAGKLGGYFKKQGKKPLLVACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++GE++ +PV+ G + P IAK GL A K D+VI+DTAGRL ID+ +M ELK
Sbjct: 147 QLQVVGEKLDIPVFNMGDKENPVNIAKAGLSHAIKNANDLVIIDTAGRLHIDEVLMAELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E+LLVVD+MTGQ+A + +FN +G+ G +LTKLDGD+RGGAALS++ V+
Sbjct: 207 SIKSEVKPHEILLVVDSMTGQDAVNVAESFNEALGVDGVVLTKLDGDTRGGAALSIRAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK +G GE+++D+EPF+PDRMA RILGMGDVLS +EKAQE + E A+E+++KI
Sbjct: 267 QKPIKFMGMGEKLDDIEPFHPDRMASRILGMGDVLSLIEKAQENIDLEKAKELEQKIKKQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPE 298
DF DFL+Q + MG + +++GMIPGMG + V K +K +A+I++MT
Sbjct: 327 ELDFEDFLQQMEQIQNMGPLDKILGMIPGMGNVKDQLGDVDLNGKEMKRTKAIIQSMTTY 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
ER P +L S R+KR+A+ SG + Q V++L+ QL +M+ MK G
Sbjct: 387 ERRNPGVLNAS--RKKRIAKGSGTSVQDVNRLIKQLNEMKKMMKMFAG 432
>gi|417849418|ref|ZP_12495339.1| signal recognition particle protein [Streptococcus mitis SK1080]
gi|339456296|gb|EGP68888.1| signal recognition particle protein [Streptococcus mitis SK1080]
Length = 523
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVNERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|332877610|ref|ZP_08445354.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|332684459|gb|EGJ57312.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
329 str. F0087]
Length = 442
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 175/335 (52%), Positives = 238/335 (71%), Gaps = 5/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG+ + + + PTVIL++GLQG GKTT S KLANYLK K+ K +LVA DVYRPAAI
Sbjct: 86 MGGDAAGVNLS-GNPTVILMSGLQGSGKTTFSGKLANYLKTKKNKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL I+GEQVGVPV++ P IA +GL AK+ +++VVIVDTAGRL +D+ MM+E+
Sbjct: 145 DQLHIVGEQVGVPVFSDKGNNNPVDIALKGLAYAKENHLNVVIVDTAGRLAVDEQMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++ + + P E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAA+++K V
Sbjct: 205 SNIHQAIKPHETLFVVDAMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAAITIKSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+M+ ++ FYPDRMA RILGMGDV+S VE+AQE +E A ++QKKI
Sbjct: 265 VNKPIKFVGTGEKMDAIDVFYPDRMADRILGMGDVVSLVERAQEQFDEEQARKLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFL+Q + + RMGSM ++GM+PG+GK + + + K +EA+I +MTP+E
Sbjct: 325 NQFGFDDFLEQIQQIKRMGSMKDLLGMLPGVGKAVK-DLDIKDDAFKHIEAIIHSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
R P ++ S R+KR+A+ SG+ Q+V+QL+ Q
Sbjct: 384 RSNPAIIDMS--RKKRIAKGSGRELQEVNQLMKQF 416
>gi|422419418|ref|ZP_16496373.1| signal recognition particle protein, partial [Listeria seeligeri
FSL N1-067]
gi|313632786|gb|EFR99746.1| signal recognition particle protein [Listeria seeligeri FSL N1-067]
Length = 427
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 174/346 (50%), Positives = 250/346 (72%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI
Sbjct: 64 MGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAI 123
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+ ++D VI+DTAGRL ID+ +MDEL
Sbjct: 124 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEDHLDYVIIDTAGRLHIDETLMDEL 183
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K VK + NPTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 184 KQVKEIANPTEILLVVDSMTGQDAVNVAESFNEQLEITGVVLTKLDGDTRGGAALSIRSV 243
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK V GE+ME +E F+PDRMA RILGMGDVLS +EKAQ + E + M++K+
Sbjct: 244 TGKPIKFVATGEKMEAIETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAMEQKMKD 303
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
+ +DFL Q + V +MG + ++ M+PG GK+ ++ +K L +EA+I++MT
Sbjct: 304 NSMTLDDFLDQLQQVKQMGPLDELLKMMPGAGKMKGLDNMQVDDKQLGHIEAIIKSMTKN 363
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E++ P+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 364 EKDNPDIINAS--RRKRIARGSGRPIQEINRLLKQFTEMKKMMKQM 407
>gi|409098690|ref|ZP_11218714.1| signal recognition particle protein [Pedobacter agri PB92]
Length = 446
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 175/344 (50%), Positives = 238/344 (69%), Gaps = 4/344 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGEV+EL K+ PT+IL+AGL G GKTT + KLA +LK +GK +LVAGD+YRPAA+D
Sbjct: 86 MGGEVTELE-TKANPTIILIAGLNGAGKTTFAGKLALHLKGKGKKPLLVAGDMYRPAAVD 144
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG VGV VY P IA +G+ K+ +V+I+DTAGRL ID+++M+E+
Sbjct: 145 QLEVLGTSVGVSVYANRESNDPVGIALEGIAHGKQNGNNVIIIDTAGRLAIDESLMNEIS 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+VK P E+L VVD+MTGQ+A FN + TG +LTKLDGD+RGGAALS+K V
Sbjct: 205 EVKAKTQPHEILFVVDSMTGQDAVNTAKVFNDRLDFTGVVLTKLDGDTRGGAALSIKSVV 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK +G GE+ME L+ FYPDRMA RILGMGDV+S VE+AQ +++A E+QKKI
Sbjct: 265 NKPIKFIGTGEKMEALDVFYPDRMASRILGMGDVVSLVERAQMQFDEKEAAELQKKIRKN 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDFNDF Q + + +MG+M ++GMIPG+GK+ V + + K +EA+I +MTP E+
Sbjct: 325 KFDFNDFYSQIQQIKKMGNMKDLMGMIPGVGKMMK-NVDIQDDAFKSIEAIINSMTPFEK 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E P+ + +S RR R+A+ SG ++V++L+ Q MR MK
Sbjct: 384 ENPDAIQQS--RRLRIAKGSGSKVEEVTKLIKQFEDMRKMMKQF 425
>gi|418094094|ref|ZP_12731221.1| signal recognition particle protein [Streptococcus pneumoniae
GA49138]
gi|353764590|gb|EHD45138.1| signal recognition particle protein [Streptococcus pneumoniae
GA49138]
Length = 523
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|149007045|ref|ZP_01830714.1| signal recognition particle protein [Streptococcus pneumoniae
SP18-BS74]
gi|168484497|ref|ZP_02709449.1| signal recognition particle protein [Streptococcus pneumoniae
CDC1873-00]
gi|307127122|ref|YP_003879153.1| signal recognition particle protein [Streptococcus pneumoniae
670-6B]
gi|417677022|ref|ZP_12326431.1| signal recognition particle protein [Streptococcus pneumoniae
GA17545]
gi|417696476|ref|ZP_12345655.1| signal recognition particle protein [Streptococcus pneumoniae
GA47368]
gi|418091914|ref|ZP_12729056.1| signal recognition particle protein [Streptococcus pneumoniae
GA44452]
gi|418110258|ref|ZP_12747281.1| signal recognition particle protein [Streptococcus pneumoniae
GA49447]
gi|418112633|ref|ZP_12749633.1| signal recognition particle protein [Streptococcus pneumoniae
GA41538]
gi|418132098|ref|ZP_12768973.1| signal recognition particle protein [Streptococcus pneumoniae
GA11304]
gi|418155278|ref|ZP_12792007.1| signal recognition particle protein [Streptococcus pneumoniae
GA16242]
gi|418162345|ref|ZP_12799029.1| signal recognition particle protein [Streptococcus pneumoniae
GA17328]
gi|418166925|ref|ZP_12803581.1| signal recognition particle protein [Streptococcus pneumoniae
GA17971]
gi|418169309|ref|ZP_12805952.1| signal recognition particle protein [Streptococcus pneumoniae
GA19077]
gi|418219027|ref|ZP_12845694.1| signal recognition particle protein [Streptococcus pneumoniae
NP127]
gi|418221339|ref|ZP_12847992.1| signal recognition particle protein [Streptococcus pneumoniae
GA47751]
gi|418225677|ref|ZP_12852305.1| signal recognition particle protein [Streptococcus pneumoniae
NP112]
gi|418238848|ref|ZP_12865401.1| signal recognition particle protein [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|419422864|ref|ZP_13963079.1| signal recognition particle protein [Streptococcus pneumoniae
GA43264]
gi|419460118|ref|ZP_14000047.1| signal recognition particle protein [Streptococcus pneumoniae
GA02270]
gi|419462451|ref|ZP_14002357.1| signal recognition particle protein [Streptococcus pneumoniae
GA02714]
gi|419466686|ref|ZP_14006569.1| signal recognition particle protein [Streptococcus pneumoniae
GA05248]
gi|419488363|ref|ZP_14028116.1| signal recognition particle protein [Streptococcus pneumoniae
GA44386]
gi|419512634|ref|ZP_14052268.1| signal recognition particle protein [Streptococcus pneumoniae
GA05578]
gi|419516909|ref|ZP_14056525.1| signal recognition particle protein [Streptococcus pneumoniae
GA02506]
gi|419526022|ref|ZP_14065584.1| signal recognition particle protein [Streptococcus pneumoniae
GA14373]
gi|421272862|ref|ZP_15723704.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR55]
gi|421283435|ref|ZP_15734222.1| signal recognition particle protein [Streptococcus pneumoniae
GA04216]
gi|147761349|gb|EDK68315.1| signal recognition particle protein [Streptococcus pneumoniae
SP18-BS74]
gi|172042260|gb|EDT50306.1| signal recognition particle protein [Streptococcus pneumoniae
CDC1873-00]
gi|306484184|gb|ADM91053.1| signal recognition particle protein [Streptococcus pneumoniae
670-6B]
gi|332074621|gb|EGI85095.1| signal recognition particle protein [Streptococcus pneumoniae
GA17545]
gi|332201751|gb|EGJ15821.1| signal recognition particle protein [Streptococcus pneumoniae
GA47368]
gi|353764014|gb|EHD44564.1| signal recognition particle protein [Streptococcus pneumoniae
GA44452]
gi|353782461|gb|EHD62895.1| signal recognition particle protein [Streptococcus pneumoniae
GA49447]
gi|353782995|gb|EHD63424.1| signal recognition particle protein [Streptococcus pneumoniae
GA41538]
gi|353807764|gb|EHD88033.1| signal recognition particle protein [Streptococcus pneumoniae
GA11304]
gi|353820656|gb|EHE00839.1| signal recognition particle protein [Streptococcus pneumoniae
GA16242]
gi|353827774|gb|EHE07923.1| signal recognition particle protein [Streptococcus pneumoniae
GA17328]
gi|353830521|gb|EHE10651.1| signal recognition particle protein [Streptococcus pneumoniae
GA17971]
gi|353834494|gb|EHE14595.1| signal recognition particle protein [Streptococcus pneumoniae
GA19077]
gi|353874649|gb|EHE54503.1| signal recognition particle protein [Streptococcus pneumoniae
GA47751]
gi|353875682|gb|EHE55534.1| signal recognition particle protein [Streptococcus pneumoniae
NP127]
gi|353880874|gb|EHE60688.1| signal recognition particle protein [Streptococcus pneumoniae
NP112]
gi|353893250|gb|EHE72996.1| signal recognition particle protein [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|379531123|gb|EHY96358.1| signal recognition particle protein [Streptococcus pneumoniae
GA02270]
gi|379531922|gb|EHY97155.1| signal recognition particle protein [Streptococcus pneumoniae
GA02714]
gi|379544809|gb|EHZ09953.1| signal recognition particle protein [Streptococcus pneumoniae
GA05248]
gi|379558282|gb|EHZ23318.1| signal recognition particle protein [Streptococcus pneumoniae
GA14373]
gi|379587390|gb|EHZ52238.1| signal recognition particle protein [Streptococcus pneumoniae
GA43264]
gi|379590478|gb|EHZ55316.1| signal recognition particle protein [Streptococcus pneumoniae
GA44386]
gi|379637104|gb|EIA01662.1| signal recognition particle protein [Streptococcus pneumoniae
GA05578]
gi|379638982|gb|EIA03526.1| signal recognition particle protein [Streptococcus pneumoniae
GA02506]
gi|395874516|gb|EJG85599.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR55]
gi|395881398|gb|EJG92447.1| signal recognition particle protein [Streptococcus pneumoniae
GA04216]
Length = 523
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKTLAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|23098986|ref|NP_692452.1| signal recognition particle protein [Oceanobacillus iheyensis
HTE831]
gi|22777214|dbj|BAC13487.1| signal recognition particle [Oceanobacillus iheyensis HTE831]
Length = 448
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 174/348 (50%), Positives = 250/348 (71%), Gaps = 8/348 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT + KLAN+L KK ++ +LVA DVYRPAAI
Sbjct: 87 MGGEQSKIAVADRSPTVIMMVGLQGAGKTTTTGKLANHLRKKHNRNPLLVACDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG Q+ +PV++ GTE P IA Q +E AK+++ D VI+DTAGRL +D+ +MDEL
Sbjct: 147 KQLETLGTQLDMPVFSMGTEANPVDIAHQAIEHAKEEHRDYVIIDTAGRLHVDENLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K + P E+ LVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS+K V
Sbjct: 207 QSIKNDVKPDEIFLVVDSMTGQDAVNVAESFNEQLDITGVVLTKLDGDTRGGAALSIKSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK G GE+++ LE F+P+RMA RILGMGDVLS +EKAQ + ++ A+E+++K+ +
Sbjct: 267 TDKPIKFAGMGEKLDQLEAFHPERMASRILGMGDVLSLIEKAQTNVDEKQAKELEEKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK---ITPAQVREAEKSLKIMEAMIEAMT 296
+F F+DFL+Q V +MG + ++ MIPG GK + AQ EK L +EA+I++MT
Sbjct: 327 MSFTFDDFLEQMGQVKQMGPLDELMDMIPGAGKMKGLKNAQFD--EKQLGQVEAIIQSMT 384
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+ER++P ++ S RRKR+A+ SG + QV++L+ Q +M+ MK +
Sbjct: 385 KKERQEPSIINGS--RRKRIAKGSGTSVAQVNRLLKQFNEMKKMMKQM 430
>gi|15903209|ref|NP_358759.1| signal recognition particle protein [Streptococcus pneumoniae R6]
gi|116515651|ref|YP_816611.1| signal recognition particle protein [Streptococcus pneumoniae D39]
gi|421266304|ref|ZP_15717185.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR27]
gi|15458797|gb|AAK99969.1| Signal recognition particle (Fifty four homolog) [Streptococcus
pneumoniae R6]
gi|116076227|gb|ABJ53947.1| signal recognition particle protein [Streptococcus pneumoniae D39]
gi|395867520|gb|EJG78643.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR27]
Length = 523
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 173/353 (49%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + ++VA D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|422731615|ref|ZP_16787973.1| signal recognition particle protein [Enterococcus faecalis TX0645]
gi|422739135|ref|ZP_16794318.1| signal recognition particle protein [Enterococcus faecalis TX2141]
gi|315144939|gb|EFT88955.1| signal recognition particle protein [Enterococcus faecalis TX2141]
gi|315162383|gb|EFU06400.1| signal recognition particle protein [Enterococcus faecalis TX0645]
Length = 472
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 171/346 (49%), Positives = 246/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E EL + PTVI++ GLQG GKTT + KLA +L K + +L+AGDVYRPAAI
Sbjct: 87 LGSETVELNKSSKIPTVIMMTGLQGAGKTTFTGKLAKHLMKTENARPLLIAGDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +LG+Q+ VPV+ GT+ P +I +QGL AK+K D V++DTAGRL ID+A+MDEL
Sbjct: 147 DQLKVLGQQLEVPVFDMGTDANPVEIVRQGLALAKEKKNDYVLIDTAGRLHIDEALMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K + NP E+LLVVDAMTGQ+A + +FN ++GITG ++TK+DGD+RGGAALS++ V
Sbjct: 207 KQIKELANPNEILLVVDAMTGQDAVNVADSFNEQLGITGVVITKMDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PIK VG GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+ +K+
Sbjct: 267 TGAPIKFVGSGEKLTDLEIFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELAQKMKE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+FDFNDF++Q V MG + ++ MIPGM + + V+ K + AM+ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVMGMGPIEDLLKMIPGMSNMPGIENVKVDPKDVARKRAMVLSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ERE P+LL +P RR+R+A SG + +V++++ Q + + M+ +
Sbjct: 387 ERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESKKMMQQM 430
>gi|422692890|ref|ZP_16750905.1| signal recognition particle protein [Enterococcus faecalis TX0031]
gi|315152349|gb|EFT96365.1| signal recognition particle protein [Enterococcus faecalis TX0031]
Length = 472
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 171/346 (49%), Positives = 246/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E EL + PTVI++ GLQG GKTT + KLA +L K + +L+AGDVYRPAAI
Sbjct: 87 LGSETVELNKSPKIPTVIMMTGLQGAGKTTFTGKLAKHLMKTENARPLLIAGDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +LG+Q+ VPV+ GT+ P +I +QGL AK+K D V++DTAGRL ID+A+MDEL
Sbjct: 147 DQLKVLGQQLEVPVFDMGTDANPVEIVRQGLALAKEKKNDYVLIDTAGRLHIDEALMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K + NP E+LLVVDAMTGQ+A + +FN ++GITG ++TK+DGD+RGGAALS++ V
Sbjct: 207 KQIKELTNPNEILLVVDAMTGQDAVNVAVSFNEQLGITGVVITKMDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PIK VG GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+ +K+
Sbjct: 267 TGAPIKFVGSGEKLTDLEIFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELAQKMKE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+FDFNDF++Q V MG + ++ MIPGM + + V+ K + AM+ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVMGMGPIEDLLKMIPGMSNMPGIENVKVDPKDVARKRAMVLSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ERE P+LL +P RR+R+A SG + +V++++ Q + + M+ +
Sbjct: 387 ERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESKKMMQQM 430
>gi|405760752|ref|YP_006701348.1| signal recognition particle protein [Streptococcus pneumoniae
SPNA45]
gi|404277641|emb|CCM08183.1| signal recognition particle protein [Streptococcus pneumoniae
SPNA45]
Length = 523
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|385261944|ref|ZP_10040059.1| signal recognition particle protein [Streptococcus sp. SK643]
gi|385191685|gb|EIF39097.1| signal recognition particle protein [Streptococcus sp. SK643]
Length = 523
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQVNHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + Q+ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDQQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAVGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|270292853|ref|ZP_06199064.1| signal recognition particle protein [Streptococcus sp. M143]
gi|270278832|gb|EFA24678.1| signal recognition particle protein [Streptococcus sp. M143]
Length = 523
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKTLAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFIEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|269836377|ref|YP_003318605.1| signal recognition particle protein [Sphaerobacter thermophilus DSM
20745]
gi|269785640|gb|ACZ37783.1| signal recognition particle protein [Sphaerobacter thermophilus DSM
20745]
Length = 504
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 169/345 (48%), Positives = 244/345 (70%), Gaps = 3/345 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+G E L A+ PT++++ GLQG GKTT AK+AN LKK+G+ ++VA DVYRPAAID
Sbjct: 86 LGEERVPLQLAQVPPTIVMVVGLQGSGKTTHVAKIANLLKKEGRRPLMVAADVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LG Q+ VPVY+ GT+ P IAK ++ A+ + VV++DTAGRLQID+ MM E++
Sbjct: 146 QLQTLGGQIDVPVYSEGTKANPVDIAKNAVKLARDRGYTVVLIDTAGRLQIDEPMMQEVE 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+ + P E+LLV DAMTGQEA + F+ + +TG +LTK+DGD+RGGAALS++ V
Sbjct: 206 RIAEAVKPHEILLVADAMTGQEAVNVAQEFHRRLALTGLVLTKMDGDARGGAALSIRSVV 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK +G GER++ +EPFYPDR+A RILGMGDVL+ +E+AQ + +E++ +++K+++
Sbjct: 266 GVPIKYIGTGERIDAVEPFYPDRLASRILGMGDVLTLIERAQAEITEEESRALEEKVLAG 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK-ITPAQVREAEKSLKIMEAMIEAMTPEE 299
F+F DFL Q + + RMG +++++ MIPG+G+ + QV+ ++ K +EAMI +MTPEE
Sbjct: 326 QFNFEDFLNQLQQIKRMGPLTQLLEMIPGIGQALRQQQVQISDDEFKHIEAMIFSMTPEE 385
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
R P++L P RRKR+A SG + QV+QLV Q QM+ M
Sbjct: 386 RRNPDIL--KPSRRKRIAAGSGTSVAQVNQLVNQFKQMQKMMAQF 428
>gi|154686014|ref|YP_001421175.1| hypothetical protein RBAM_015810 [Bacillus amyloliquefaciens FZB42]
gi|385264724|ref|ZP_10042811.1| signal recognition particle protein [Bacillus sp. 5B6]
gi|394993936|ref|ZP_10386675.1| signal recognition particle protein [Bacillus sp. 916]
gi|429505149|ref|YP_007186333.1| signal recognition particle protein [Bacillus amyloliquefaciens
subsp. plantarum AS43.3]
gi|154351865|gb|ABS73944.1| Ffh [Bacillus amyloliquefaciens FZB42]
gi|385149220|gb|EIF13157.1| signal recognition particle protein [Bacillus sp. 5B6]
gi|393805260|gb|EJD66640.1| signal recognition particle protein [Bacillus sp. 916]
gi|429486739|gb|AFZ90663.1| signal recognition particle protein [Bacillus amyloliquefaciens
subsp. plantarum AS43.3]
Length = 446
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 172/352 (48%), Positives = 255/352 (72%), Gaps = 4/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ AK PTVI++ GLQG GKTT + KLAN L KK + +LVA D+YRPAAI
Sbjct: 87 MGGEESKIAVAKRPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IA+Q +E+AK+++ D VI+DTAGRL ID +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIARQAIEKAKEEHHDYVILDTAGRLHIDHELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK V NP E+ LVVD+MTGQ+A + +FN ++G+TG ILTKLDGD+RGGAALS++ V
Sbjct: 207 SGVKEVANPEEIFLVVDSMTGQDAVNVAKSFNDQLGLTGVILTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + ++ A+E+++K+ +
Sbjct: 267 TETPIKFAGMGEKLDALEAFHPERMASRILGMGDVLTLIEKAQATVDEDKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+F +DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I++MT
Sbjct: 327 MSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIKSMTVL 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
E+E+P+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 387 EKEQPDIINAS--RRKRIAKGSGTSVQEVNRLLKQFEEMKKMMKQMTNMTKG 436
>gi|317121794|ref|YP_004101797.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermaerobacter marianensis DSM 12885]
gi|315591774|gb|ADU51070.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermaerobacter marianensis DSM 12885]
Length = 445
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 178/360 (49%), Positives = 254/360 (70%), Gaps = 6/360 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG+ + L + P ++L GLQG GKTT +AKLA L +QG+ +LVA DVYRPAA++
Sbjct: 87 MGGQQARLDLGGAPPVPVMLVGLQGSGKTTTAAKLARLLARQGRQPLLVAADVYRPAAVE 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLV LG+Q+ +PV+ GT+ P IA++G+ EA+++ DVVI+DTAGRL ID A+M+EL+
Sbjct: 147 QLVTLGQQIQLPVHAPGTDRDPVDIAREGVAEARRRGRDVVIIDTAGRLHIDDALMEELE 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+++ + P E+LLVVDAMTGQ+A + TF+ +GI G +LTKLDGD+RGGAALSV+ V+
Sbjct: 207 RIRQAVAPREILLVVDAMTGQDAVNVAETFHRRLGIDGVVLTKLDGDARGGAALSVRAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GER++ LEPF+P+RMA RILGMGDVLS +EKAQ + A+ +++K+
Sbjct: 267 GRPIKFVGLGERVDQLEPFHPERMASRILGMGDVLSLIEKAQAAFDAQQAQRLERKLREQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIEAMTPEE 299
FD DFL+Q R V +MG + +++ MIPG+G ++ V E E L+ +EA+I++MTPEE
Sbjct: 327 TFDLEDFLEQLRQVRKMGPLDQLLAMIPGLGPRLKDVTVDEGE--LRRIEAIIQSMTPEE 384
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 359
R PE++ S RR+R+A+ SG Q V++L+ Q + + MK + G G L NL
Sbjct: 385 RRHPEIINAS--RRRRIARGSGTRVQDVNRLLKQFAETQRLMKQVTGAARRGR-RGLGNL 441
>gi|419442690|ref|ZP_13982718.1| signal recognition particle protein [Streptococcus pneumoniae
GA13224]
gi|379551991|gb|EHZ17082.1| signal recognition particle protein [Streptococcus pneumoniae
GA13224]
Length = 523
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|194398377|ref|YP_002037890.1| signal recognition particle protein [Streptococcus pneumoniae G54]
gi|194358044|gb|ACF56492.1| signal recognition particle protein [Streptococcus pneumoniae G54]
Length = 523
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEXLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|307706752|ref|ZP_07643557.1| signal recognition particle protein [Streptococcus mitis SK321]
gi|307617837|gb|EFN96999.1| signal recognition particle protein [Streptococcus mitis SK321]
Length = 523
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|331269654|ref|YP_004396146.1| signal recognition particle protein [Clostridium botulinum
BKT015925]
gi|329126204|gb|AEB76149.1| signal recognition particle protein [Clostridium botulinum
BKT015925]
Length = 451
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 168/333 (50%), Positives = 241/333 (72%), Gaps = 2/333 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S++ F+ + TVI+L GLQG GKTT++ KLA L+K K +LVA D+YRPAAI
Sbjct: 87 MGSTESKIEFSSTGLTVIMLVGLQGAGKTTMAGKLALQLRKNNKKPLLVACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G Q+ +PV++ G +V P IAK +E AK +VVI+DTAGRL ID+A+MDEL+
Sbjct: 147 QLQVVGNQIDIPVFSMGDKVNPVDIAKASIEHAKNNKNNVVIIDTAGRLHIDEALMDELE 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + P E+LLVVD+MTGQ+A + TFN ++ I+G ILTKLDGD+RGGAALS+K V+
Sbjct: 207 NIKTSVEPNEILLVVDSMTGQDAVNVSETFNNKLDISGVILTKLDGDTRGGAALSIKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GE+M DLE F+PDRMA RILGMGDVLS +EKAQE + +E A+E+ K+++
Sbjct: 267 GKPIKYVGLGEKMNDLEVFHPDRMASRILGMGDVLSLIEKAQEAIDEEKAKELGDKMLNL 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPE 298
F+ DF + + +MG ++++I M+PG+ ++ + EK L +EAMI++MT +
Sbjct: 327 EFNLEDFKESMAQMKKMGPLTKLIEMMPGVNSKQLQGLDLSNGEKELTKIEAMIDSMTLK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 331
ER+ P +++ SP R++R+A SG QQV++L+
Sbjct: 387 ERKDPSVVSNSPSRKRRIANGSGCNVQQVNKLL 419
>gi|342732348|ref|YP_004771187.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|384455751|ref|YP_005668346.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|417962271|ref|ZP_12604520.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-2]
gi|417962397|ref|ZP_12604607.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-3]
gi|417965566|ref|ZP_12607074.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-4]
gi|417968297|ref|ZP_12609330.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-co]
gi|418016250|ref|ZP_12655815.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|418372604|ref|ZP_12964696.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-SU]
gi|342329803|dbj|BAK56445.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|345506585|gb|EGX28879.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|346984094|dbj|BAK79770.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|380330716|gb|EIA21901.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-2]
gi|380336378|gb|EIA26396.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-4]
gi|380337762|gb|EIA26772.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-3]
gi|380339962|gb|EIA28617.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-co]
gi|380342273|gb|EIA30718.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-SU]
Length = 454
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 165/351 (47%), Positives = 250/351 (71%), Gaps = 4/351 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG + S+L + + T+I+L GLQG GKTT++AKL+ Y +K GK+ +++A DVYRPAA+
Sbjct: 87 MGNDQSKLNYNVNGTTIIMLVGLQGAGKTTMAAKLSLYCRKSGKTPLMIACDVYRPAAVK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG Q+ +PV++ P I K+GLEEA+K +VVI+DTAGRL ID A+M+ELK
Sbjct: 147 QLEVLGNQINIPVFSIPDSKDPLYIVKKGLEEAEKNMNNVVIIDTAGRLHIDDALMNELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + +P+E+L+V+D+M GQE+ + TFN ++ +TG +LTKLDGD+RGG ALS+KEV
Sbjct: 207 EIKELSDPSEILMVIDSMIGQESVNIAETFNDKLDVTGFVLTKLDGDTRGGVALSIKEVI 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GK IK +G GE++ DLE F+PDRMA RILGMGDVLS +EKAQE + Q++A+++ +++++
Sbjct: 267 GKNIKFIGVGEKIGDLEVFHPDRMASRILGMGDVLSLIEKAQEAIDQDEAQKLSERMLAN 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEAMIEAMT 296
F+F DF + + ++GS S+++ MIPG G ++ + ++EK L +EA+I +MT
Sbjct: 327 EFNFEDFKSAMQQMKKIGSFSKILQMIPGFGNSMKELKNINLDDSEKELCKIEAIINSMT 386
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
+ER+ P+LL S R+ R+A+ SG T QV++L+ M MK G+
Sbjct: 387 IKERKNPKLLMGSASRKSRIAKGSGSTVNQVNKLIKDFENMSKMMKQFKGM 437
>gi|225860882|ref|YP_002742391.1| signal recognition particle protein [Streptococcus pneumoniae
Taiwan19F-14]
gi|298230784|ref|ZP_06964465.1| signal recognition particle protein [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|298254274|ref|ZP_06977860.1| signal recognition particle protein [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|298502715|ref|YP_003724655.1| signal recognition particle protein [Streptococcus pneumoniae
TCH8431/19A]
gi|387788081|ref|YP_006253149.1| signal recognition particle protein [Streptococcus pneumoniae
ST556]
gi|418083186|ref|ZP_12720385.1| signal recognition particle protein [Streptococcus pneumoniae
GA44288]
gi|418085327|ref|ZP_12722509.1| signal recognition particle protein [Streptococcus pneumoniae
GA47281]
gi|418100317|ref|ZP_12737405.1| signal recognition particle protein [Streptococcus pneumoniae
7286-06]
gi|418119991|ref|ZP_12756942.1| signal recognition particle protein [Streptococcus pneumoniae
GA18523]
gi|418141847|ref|ZP_12778660.1| signal recognition particle protein [Streptococcus pneumoniae
GA13455]
gi|418150745|ref|ZP_12787492.1| signal recognition particle protein [Streptococcus pneumoniae
GA14798]
gi|418153004|ref|ZP_12789743.1| signal recognition particle protein [Streptococcus pneumoniae
GA16121]
gi|418157241|ref|ZP_12793957.1| signal recognition particle protein [Streptococcus pneumoniae
GA16833]
gi|418171136|ref|ZP_12807763.1| signal recognition particle protein [Streptococcus pneumoniae
GA19451]
gi|418195493|ref|ZP_12831973.1| signal recognition particle protein [Streptococcus pneumoniae
GA47688]
gi|418198091|ref|ZP_12834551.1| signal recognition particle protein [Streptococcus pneumoniae
GA47778]
gi|418223322|ref|ZP_12849963.1| signal recognition particle protein [Streptococcus pneumoniae
5185-06]
gi|419425283|ref|ZP_13965480.1| signal recognition particle protein [Streptococcus pneumoniae
7533-05]
gi|419427233|ref|ZP_13967416.1| signal recognition particle protein [Streptococcus pneumoniae
5652-06]
gi|419429411|ref|ZP_13969578.1| signal recognition particle protein [Streptococcus pneumoniae
GA11856]
gi|419436128|ref|ZP_13976218.1| signal recognition particle protein [Streptococcus pneumoniae
8190-05]
gi|419444532|ref|ZP_13984547.1| signal recognition particle protein [Streptococcus pneumoniae
GA19923]
gi|419446663|ref|ZP_13986668.1| signal recognition particle protein [Streptococcus pneumoniae
7879-04]
gi|419448892|ref|ZP_13988889.1| signal recognition particle protein [Streptococcus pneumoniae
4075-00]
gi|419451595|ref|ZP_13991581.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP02]
gi|419501991|ref|ZP_14041675.1| signal recognition particle protein [Streptococcus pneumoniae
GA47628]
gi|419519049|ref|ZP_14058655.1| signal recognition particle protein [Streptococcus pneumoniae
GA08825]
gi|419528669|ref|ZP_14068211.1| signal recognition particle protein [Streptococcus pneumoniae
GA17719]
gi|421287407|ref|ZP_15738173.1| signal recognition particle protein [Streptococcus pneumoniae
GA58771]
gi|225728379|gb|ACO24230.1| signal recognition particle protein [Streptococcus pneumoniae
Taiwan19F-14]
gi|298238310|gb|ADI69441.1| signal recognition particle protein [Streptococcus pneumoniae
TCH8431/19A]
gi|353755262|gb|EHD35867.1| signal recognition particle protein [Streptococcus pneumoniae
GA44288]
gi|353757282|gb|EHD37876.1| signal recognition particle protein [Streptococcus pneumoniae
GA47281]
gi|353773026|gb|EHD53525.1| signal recognition particle protein [Streptococcus pneumoniae
7286-06]
gi|353789104|gb|EHD69500.1| signal recognition particle protein [Streptococcus pneumoniae
GA18523]
gi|353806098|gb|EHD86372.1| signal recognition particle protein [Streptococcus pneumoniae
GA13455]
gi|353814628|gb|EHD94851.1| signal recognition particle protein [Streptococcus pneumoniae
GA14798]
gi|353817555|gb|EHD97757.1| signal recognition particle protein [Streptococcus pneumoniae
GA16121]
gi|353823689|gb|EHE03863.1| signal recognition particle protein [Streptococcus pneumoniae
GA16833]
gi|353837306|gb|EHE17392.1| signal recognition particle protein [Streptococcus pneumoniae
GA19451]
gi|353862020|gb|EHE41953.1| signal recognition particle protein [Streptococcus pneumoniae
GA47688]
gi|353862729|gb|EHE42659.1| signal recognition particle protein [Streptococcus pneumoniae
GA47778]
gi|353879448|gb|EHE59274.1| signal recognition particle protein [Streptococcus pneumoniae
5185-06]
gi|379137823|gb|AFC94614.1| signal recognition particle protein [Streptococcus pneumoniae
ST556]
gi|379551359|gb|EHZ16454.1| signal recognition particle protein [Streptococcus pneumoniae
GA11856]
gi|379564692|gb|EHZ29688.1| signal recognition particle protein [Streptococcus pneumoniae
GA17719]
gi|379572225|gb|EHZ37182.1| signal recognition particle protein [Streptococcus pneumoniae
GA19923]
gi|379600204|gb|EHZ64985.1| signal recognition particle protein [Streptococcus pneumoniae
GA47628]
gi|379614203|gb|EHZ78913.1| signal recognition particle protein [Streptococcus pneumoniae
7879-04]
gi|379615148|gb|EHZ79857.1| signal recognition particle protein [Streptococcus pneumoniae
8190-05]
gi|379618686|gb|EHZ83361.1| signal recognition particle protein [Streptococcus pneumoniae
5652-06]
gi|379619720|gb|EHZ84390.1| signal recognition particle protein [Streptococcus pneumoniae
7533-05]
gi|379623300|gb|EHZ87934.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP02]
gi|379623950|gb|EHZ88583.1| signal recognition particle protein [Streptococcus pneumoniae
4075-00]
gi|379640886|gb|EIA05424.1| signal recognition particle protein [Streptococcus pneumoniae
GA08825]
gi|395889816|gb|EJH00823.1| signal recognition particle protein [Streptococcus pneumoniae
GA58771]
Length = 523
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPNRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|149012344|ref|ZP_01833413.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP19-BS75]
gi|169832782|ref|YP_001694736.1| signal recognition particle protein [Streptococcus pneumoniae
Hungary19A-6]
gi|225854751|ref|YP_002736263.1| signal recognition particle protein [Streptococcus pneumoniae JJA]
gi|303261607|ref|ZP_07347554.1| signal recognition particle protein [Streptococcus pneumoniae
SP14-BS292]
gi|303267279|ref|ZP_07353142.1| signal recognition particle protein [Streptococcus pneumoniae
BS457]
gi|303268434|ref|ZP_07354229.1| signal recognition particle protein [Streptococcus pneumoniae
BS458]
gi|387759487|ref|YP_006066465.1| signal recognition particle protein [Streptococcus pneumoniae
INV200]
gi|418096377|ref|ZP_12733490.1| signal recognition particle protein [Streptococcus pneumoniae
GA16531]
gi|418139654|ref|ZP_12776480.1| signal recognition particle protein [Streptococcus pneumoniae
GA13338]
gi|418148686|ref|ZP_12785451.1| signal recognition particle protein [Streptococcus pneumoniae
GA13856]
gi|418160014|ref|ZP_12796713.1| signal recognition particle protein [Streptococcus pneumoniae
GA17227]
gi|418180682|ref|ZP_12817252.1| signal recognition particle protein [Streptococcus pneumoniae
GA41688]
gi|418182902|ref|ZP_12819462.1| signal recognition particle protein [Streptococcus pneumoniae
GA43380]
gi|418200008|ref|ZP_12836453.1| signal recognition particle protein [Streptococcus pneumoniae
GA47976]
gi|419514852|ref|ZP_14054477.1| signal recognition particle protein [Streptococcus pneumoniae
England14-9]
gi|419521248|ref|ZP_14060843.1| signal recognition particle protein [Streptococcus pneumoniae
GA05245]
gi|421220436|ref|ZP_15677280.1| signal recognition particle protein [Streptococcus pneumoniae
2070425]
gi|421222746|ref|ZP_15679532.1| signal recognition particle protein [Streptococcus pneumoniae
2070531]
gi|421296167|ref|ZP_15746878.1| signal recognition particle protein [Streptococcus pneumoniae
GA58581]
gi|147763670|gb|EDK70605.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP19-BS75]
gi|168995284|gb|ACA35896.1| signal recognition particle protein [Streptococcus pneumoniae
Hungary19A-6]
gi|225723340|gb|ACO19193.1| signal recognition particle protein [Streptococcus pneumoniae JJA]
gi|301802076|emb|CBW34809.1| signal recognition particle protein [Streptococcus pneumoniae
INV200]
gi|302637187|gb|EFL67675.1| signal recognition particle protein [Streptococcus pneumoniae
SP14-BS292]
gi|302642040|gb|EFL72392.1| signal recognition particle protein [Streptococcus pneumoniae
BS458]
gi|302643206|gb|EFL73490.1| signal recognition particle protein [Streptococcus pneumoniae
BS457]
gi|353769381|gb|EHD49899.1| signal recognition particle protein [Streptococcus pneumoniae
GA16531]
gi|353813361|gb|EHD93594.1| signal recognition particle protein [Streptococcus pneumoniae
GA13856]
gi|353821747|gb|EHE01923.1| signal recognition particle protein [Streptococcus pneumoniae
GA17227]
gi|353845384|gb|EHE25426.1| signal recognition particle protein [Streptococcus pneumoniae
GA41688]
gi|353849043|gb|EHE29053.1| signal recognition particle protein [Streptococcus pneumoniae
GA43380]
gi|353865055|gb|EHE44964.1| signal recognition particle protein [Streptococcus pneumoniae
GA47976]
gi|353905127|gb|EHE80566.1| signal recognition particle protein [Streptococcus pneumoniae
GA13338]
gi|379538548|gb|EHZ03728.1| signal recognition particle protein [Streptococcus pneumoniae
GA05245]
gi|379635401|gb|EHZ99959.1| signal recognition particle protein [Streptococcus pneumoniae
England14-9]
gi|395587552|gb|EJG47899.1| signal recognition particle protein [Streptococcus pneumoniae
2070425]
gi|395587808|gb|EJG48150.1| signal recognition particle protein [Streptococcus pneumoniae
2070531]
gi|395896040|gb|EJH07008.1| signal recognition particle protein [Streptococcus pneumoniae
GA58581]
Length = 523
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|70726678|ref|YP_253592.1| hypothetical protein SH1677 [Staphylococcus haemolyticus JCSC1435]
gi|68447402|dbj|BAE04986.1| ffh [Staphylococcus haemolyticus JCSC1435]
Length = 456
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 176/366 (48%), Positives = 258/366 (70%), Gaps = 4/366 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S + A PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI
Sbjct: 87 MGGENSTIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ VPVY+ G +VKP QI + L+ AK++++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 NQLQTVGKQLDVPVYSEGDQVKPQQIVENALKHAKEEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++VK + P E++LVVDAMTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V
Sbjct: 207 QEVKEISKPNEIMLVVDAMTGQDAVNVAQSFDDQLDVTGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+M+ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A+++++K+ +
Sbjct: 267 TQKPIKFVGMSEKMDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEQKMRN 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
+ F +DFL+Q V +G + ++ MIPGM K+ ++ EK + ++A+I++MTP
Sbjct: 327 STFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGMDKLNMDEKQIDHIKAIIQSMTPS 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSN 358
ERE P +L S R+KR+A+ SG++ Q+V++L+ Q M+ MK G G S
Sbjct: 387 ERENPAVLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQFSGAGRKGKKGKRSQ 444
Query: 359 LEDALK 364
+E+ LK
Sbjct: 445 MENMLK 450
>gi|289435144|ref|YP_003465016.1| signal recognition particle protein [Listeria seeligeri serovar
1/2b str. SLCC3954]
gi|289171388|emb|CBH27932.1| signal recognition particle protein [Listeria seeligeri serovar
1/2b str. SLCC3954]
Length = 450
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 174/346 (50%), Positives = 250/346 (72%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI
Sbjct: 87 MGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+ ++D VI+DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEDHLDYVIIDTAGRLHIDETLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K VK + NPTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KQVKEIANPTEILLVVDSMTGQDAVNVAESFNEQLEITGVVLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK V GE+ME +E F+PDRMA RILGMGDVLS +EKAQ + E + M++K+
Sbjct: 267 TGKPIKFVATGEKMEAIETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAMEQKMKD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
+ +DFL Q + V +MG + ++ M+PG GK+ ++ +K L +EA+I++MT
Sbjct: 327 NSMTLDDFLDQLQQVKQMGPLDELLKMMPGAGKMKGLDNMQVDDKQLGHIEAIIKSMTKN 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E++ P+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 387 EKDNPDIINAS--RRKRIARGSGRPIQEINRLLKQFNEMKKMMKQM 430
>gi|418974258|ref|ZP_13522176.1| signal recognition particle protein [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383345430|gb|EID23554.1| signal recognition particle protein [Streptococcus pseudopneumoniae
ATCC BAA-960]
Length = 523
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKVLAQPNEILLVVDAMIGQEAANVAHEFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIAQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|15901147|ref|NP_345751.1| signal recognition particle protein [Streptococcus pneumoniae
TIGR4]
gi|111658514|ref|ZP_01409180.1| hypothetical protein SpneT_02000341 [Streptococcus pneumoniae
TIGR4]
gi|148989312|ref|ZP_01820692.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP6-BS73]
gi|148998927|ref|ZP_01826362.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP11-BS70]
gi|149002661|ref|ZP_01827593.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP14-BS69]
gi|168487456|ref|ZP_02711964.1| signal recognition particle protein [Streptococcus pneumoniae
CDC1087-00]
gi|168491206|ref|ZP_02715349.1| signal recognition particle protein [Streptococcus pneumoniae
CDC0288-04]
gi|168493207|ref|ZP_02717350.1| signal recognition particle protein [Streptococcus pneumoniae
CDC3059-06]
gi|168575742|ref|ZP_02721657.1| signal recognition particle protein [Streptococcus pneumoniae
MLV-016]
gi|221231975|ref|YP_002511127.1| signal recognition particle protein [Streptococcus pneumoniae ATCC
700669]
gi|225859083|ref|YP_002740593.1| signal recognition particle protein [Streptococcus pneumoniae
70585]
gi|237649986|ref|ZP_04524238.1| signal recognition particle protein [Streptococcus pneumoniae CCRI
1974]
gi|237821108|ref|ZP_04596953.1| signal recognition particle protein [Streptococcus pneumoniae CCRI
1974M2]
gi|307067936|ref|YP_003876902.1| signal recognition particle GTPase [Streptococcus pneumoniae AP200]
gi|387626577|ref|YP_006062752.1| signal recognition particle protein [Streptococcus pneumoniae
INV104]
gi|415698973|ref|ZP_11457370.1| signal recognition particle protein [Streptococcus pneumoniae
459-5]
gi|415749643|ref|ZP_11477587.1| signal recognition particle protein [Streptococcus pneumoniae SV35]
gi|415752329|ref|ZP_11479440.1| signal recognition particle protein [Streptococcus pneumoniae SV36]
gi|417679247|ref|ZP_12328644.1| signal recognition particle protein [Streptococcus pneumoniae
GA17570]
gi|417694199|ref|ZP_12343387.1| signal recognition particle protein [Streptococcus pneumoniae
GA47901]
gi|418074059|ref|ZP_12711315.1| signal recognition particle protein [Streptococcus pneumoniae
GA11184]
gi|418076430|ref|ZP_12713666.1| signal recognition particle protein [Streptococcus pneumoniae
GA47502]
gi|418078752|ref|ZP_12715975.1| signal recognition particle protein [Streptococcus pneumoniae
4027-06]
gi|418080725|ref|ZP_12717937.1| signal recognition particle protein [Streptococcus pneumoniae
6735-05]
gi|418086987|ref|ZP_12724157.1| signal recognition particle protein [Streptococcus pneumoniae
GA47033]
gi|418089661|ref|ZP_12726817.1| signal recognition particle protein [Streptococcus pneumoniae
GA43265]
gi|418098634|ref|ZP_12735733.1| signal recognition particle protein [Streptococcus pneumoniae
6901-05]
gi|418105354|ref|ZP_12742412.1| signal recognition particle protein [Streptococcus pneumoniae
GA44500]
gi|418114832|ref|ZP_12751820.1| signal recognition particle protein [Streptococcus pneumoniae
5787-06]
gi|418116996|ref|ZP_12753966.1| signal recognition particle protein [Streptococcus pneumoniae
6963-05]
gi|418121327|ref|ZP_12758271.1| signal recognition particle protein [Streptococcus pneumoniae
GA44194]
gi|418123542|ref|ZP_12760475.1| signal recognition particle protein [Streptococcus pneumoniae
GA44378]
gi|418128127|ref|ZP_12765022.1| signal recognition particle protein [Streptococcus pneumoniae
NP170]
gi|418130445|ref|ZP_12767328.1| signal recognition particle protein [Streptococcus pneumoniae
GA07643]
gi|418135326|ref|ZP_12772182.1| signal recognition particle protein [Streptococcus pneumoniae
GA11426]
gi|418137312|ref|ZP_12774152.1| signal recognition particle protein [Streptococcus pneumoniae
GA11663]
gi|418144126|ref|ZP_12780926.1| signal recognition particle protein [Streptococcus pneumoniae
GA13494]
gi|418173647|ref|ZP_12810260.1| signal recognition particle protein [Streptococcus pneumoniae
GA41277]
gi|418178302|ref|ZP_12814886.1| signal recognition particle protein [Streptococcus pneumoniae
GA41565]
gi|418185094|ref|ZP_12821638.1| signal recognition particle protein [Streptococcus pneumoniae
GA47283]
gi|418187293|ref|ZP_12823819.1| signal recognition particle protein [Streptococcus pneumoniae
GA47360]
gi|418189519|ref|ZP_12826034.1| signal recognition particle protein [Streptococcus pneumoniae
GA47373]
gi|418193898|ref|ZP_12830389.1| signal recognition particle protein [Streptococcus pneumoniae
GA47439]
gi|418202524|ref|ZP_12838954.1| signal recognition particle protein [Streptococcus pneumoniae
GA52306]
gi|418216716|ref|ZP_12843439.1| signal recognition particle protein [Streptococcus pneumoniae
Netherlands15B-37]
gi|418230027|ref|ZP_12856630.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP01]
gi|419434387|ref|ZP_13974504.1| signal recognition particle protein [Streptococcus pneumoniae
GA40183]
gi|419440491|ref|ZP_13980539.1| signal recognition particle protein [Streptococcus pneumoniae
GA40410]
gi|419455667|ref|ZP_13995625.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP04]
gi|419457671|ref|ZP_13997615.1| signal recognition particle protein [Streptococcus pneumoniae
GA02254]
gi|419464590|ref|ZP_14004482.1| signal recognition particle protein [Streptococcus pneumoniae
GA04175]
gi|419469124|ref|ZP_14008995.1| signal recognition particle protein [Streptococcus pneumoniae
GA06083]
gi|419471210|ref|ZP_14011069.1| signal recognition particle protein [Streptococcus pneumoniae
GA07914]
gi|419473327|ref|ZP_14013178.1| signal recognition particle protein [Streptococcus pneumoniae
GA13430]
gi|419477943|ref|ZP_14017767.1| signal recognition particle protein [Streptococcus pneumoniae
GA18068]
gi|419482318|ref|ZP_14022109.1| signal recognition particle protein [Streptococcus pneumoniae
GA40563]
gi|419491172|ref|ZP_14030911.1| signal recognition particle protein [Streptococcus pneumoniae
GA47179]
gi|419504064|ref|ZP_14043733.1| signal recognition particle protein [Streptococcus pneumoniae
GA47760]
gi|419509866|ref|ZP_14049510.1| signal recognition particle protein [Streptococcus pneumoniae
NP141]
gi|419530027|ref|ZP_14069558.1| signal recognition particle protein [Streptococcus pneumoniae
GA40028]
gi|419532478|ref|ZP_14071994.1| signal recognition particle protein [Streptococcus pneumoniae
GA47794]
gi|419534761|ref|ZP_14074262.1| signal recognition particle protein [Streptococcus pneumoniae
GA17457]
gi|421211352|ref|ZP_15668335.1| signal recognition particle protein [Streptococcus pneumoniae
2070035]
gi|421213342|ref|ZP_15670299.1| signal recognition particle protein [Streptococcus pneumoniae
2070108]
gi|421215585|ref|ZP_15672506.1| signal recognition particle protein [Streptococcus pneumoniae
2070109]
gi|421232027|ref|ZP_15688670.1| signal recognition particle protein [Streptococcus pneumoniae
2080076]
gi|421234261|ref|ZP_15690881.1| signal recognition particle protein [Streptococcus pneumoniae
2061617]
gi|421243217|ref|ZP_15699736.1| signal recognition particle protein [Streptococcus pneumoniae
2081074]
gi|421247544|ref|ZP_15704030.1| signal recognition particle protein [Streptococcus pneumoniae
2082170]
gi|421249572|ref|ZP_15706030.1| signal recognition particle protein [Streptococcus pneumoniae
2082239]
gi|421270711|ref|ZP_15721566.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR48]
gi|421275004|ref|ZP_15725834.1| signal recognition particle protein [Streptococcus pneumoniae
GA52612]
gi|421279062|ref|ZP_15729869.1| signal recognition particle protein [Streptococcus pneumoniae
GA17301]
gi|421281247|ref|ZP_15732045.1| signal recognition particle protein [Streptococcus pneumoniae
GA04672]
gi|421285241|ref|ZP_15736018.1| signal recognition particle protein [Streptococcus pneumoniae
GA60190]
gi|421289884|ref|ZP_15740635.1| signal recognition particle protein [Streptococcus pneumoniae
GA54354]
gi|421298726|ref|ZP_15749414.1| signal recognition particle protein [Streptococcus pneumoniae
GA60080]
gi|421305204|ref|ZP_15755860.1| signal recognition particle protein [Streptococcus pneumoniae
GA62331]
gi|421307600|ref|ZP_15758243.1| signal recognition particle protein [Streptococcus pneumoniae
GA60132]
gi|421313744|ref|ZP_15764334.1| signal recognition particle protein [Streptococcus pneumoniae
GA47562]
gi|444382017|ref|ZP_21180222.1| signal recognition particle protein [Streptococcus pneumoniae
PCS8106]
gi|444384538|ref|ZP_21182632.1| signal recognition particle protein [Streptococcus pneumoniae
PCS8203]
gi|14972772|gb|AAK75391.1| signal recognition particle protein [Streptococcus pneumoniae
TIGR4]
gi|147755237|gb|EDK62289.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP11-BS70]
gi|147759272|gb|EDK66265.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP14-BS69]
gi|147925290|gb|EDK76369.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP6-BS73]
gi|183569731|gb|EDT90259.1| signal recognition particle protein [Streptococcus pneumoniae
CDC1087-00]
gi|183574503|gb|EDT95031.1| signal recognition particle protein [Streptococcus pneumoniae
CDC0288-04]
gi|183576649|gb|EDT97177.1| signal recognition particle protein [Streptococcus pneumoniae
CDC3059-06]
gi|183578377|gb|EDT98905.1| signal recognition particle protein [Streptococcus pneumoniae
MLV-016]
gi|220674435|emb|CAR68988.1| signal recognition particle protein [Streptococcus pneumoniae ATCC
700669]
gi|225720844|gb|ACO16698.1| signal recognition particle protein [Streptococcus pneumoniae
70585]
gi|301794362|emb|CBW36790.1| signal recognition particle protein [Streptococcus pneumoniae
INV104]
gi|306409473|gb|ADM84900.1| Signal recognition particle GTPase [Streptococcus pneumoniae AP200]
gi|332073626|gb|EGI84105.1| signal recognition particle protein [Streptococcus pneumoniae
GA17570]
gi|332203136|gb|EGJ17204.1| signal recognition particle protein [Streptococcus pneumoniae
GA47901]
gi|353747943|gb|EHD28599.1| signal recognition particle protein [Streptococcus pneumoniae
4027-06]
gi|353749131|gb|EHD29781.1| signal recognition particle protein [Streptococcus pneumoniae
GA47502]
gi|353749559|gb|EHD30203.1| signal recognition particle protein [Streptococcus pneumoniae
GA11184]
gi|353753265|gb|EHD33889.1| signal recognition particle protein [Streptococcus pneumoniae
6735-05]
gi|353759248|gb|EHD39834.1| signal recognition particle protein [Streptococcus pneumoniae
GA47033]
gi|353761659|gb|EHD42225.1| signal recognition particle protein [Streptococcus pneumoniae
GA43265]
gi|353769994|gb|EHD50510.1| signal recognition particle protein [Streptococcus pneumoniae
6901-05]
gi|353777419|gb|EHD57892.1| signal recognition particle protein [Streptococcus pneumoniae
GA44500]
gi|353786345|gb|EHD66758.1| signal recognition particle protein [Streptococcus pneumoniae
5787-06]
gi|353789357|gb|EHD69752.1| signal recognition particle protein [Streptococcus pneumoniae
6963-05]
gi|353793229|gb|EHD73598.1| signal recognition particle protein [Streptococcus pneumoniae
GA44194]
gi|353796888|gb|EHD77226.1| signal recognition particle protein [Streptococcus pneumoniae
GA44378]
gi|353799558|gb|EHD79876.1| signal recognition particle protein [Streptococcus pneumoniae
NP170]
gi|353801769|gb|EHD82069.1| signal recognition particle protein [Streptococcus pneumoniae
GA07643]
gi|353809867|gb|EHD90127.1| signal recognition particle protein [Streptococcus pneumoniae
GA13494]
gi|353838464|gb|EHE18542.1| signal recognition particle protein [Streptococcus pneumoniae
GA41277]
gi|353845076|gb|EHE25119.1| signal recognition particle protein [Streptococcus pneumoniae
GA41565]
gi|353849413|gb|EHE29419.1| signal recognition particle protein [Streptococcus pneumoniae
GA47283]
gi|353851449|gb|EHE31444.1| signal recognition particle protein [Streptococcus pneumoniae
GA47360]
gi|353856661|gb|EHE36630.1| signal recognition particle protein [Streptococcus pneumoniae
GA47373]
gi|353859118|gb|EHE39073.1| signal recognition particle protein [Streptococcus pneumoniae
GA47439]
gi|353868327|gb|EHE48217.1| signal recognition particle protein [Streptococcus pneumoniae
GA52306]
gi|353872308|gb|EHE52174.1| signal recognition particle protein [Streptococcus pneumoniae
Netherlands15B-37]
gi|353887549|gb|EHE67327.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP01]
gi|353901303|gb|EHE76847.1| signal recognition particle protein [Streptococcus pneumoniae
GA11663]
gi|353901474|gb|EHE77016.1| signal recognition particle protein [Streptococcus pneumoniae
GA11426]
gi|379531544|gb|EHY96778.1| signal recognition particle protein [Streptococcus pneumoniae
GA02254]
gi|379537624|gb|EHZ02806.1| signal recognition particle protein [Streptococcus pneumoniae
GA04175]
gi|379545926|gb|EHZ11065.1| signal recognition particle protein [Streptococcus pneumoniae
GA07914]
gi|379547227|gb|EHZ12365.1| signal recognition particle protein [Streptococcus pneumoniae
GA06083]
gi|379552834|gb|EHZ17923.1| signal recognition particle protein [Streptococcus pneumoniae
GA13430]
gi|379564109|gb|EHZ29106.1| signal recognition particle protein [Streptococcus pneumoniae
GA17457]
gi|379565379|gb|EHZ30371.1| signal recognition particle protein [Streptococcus pneumoniae
GA18068]
gi|379574767|gb|EHZ39705.1| signal recognition particle protein [Streptococcus pneumoniae
GA40028]
gi|379575771|gb|EHZ40701.1| signal recognition particle protein [Streptococcus pneumoniae
GA40183]
gi|379578631|gb|EHZ43540.1| signal recognition particle protein [Streptococcus pneumoniae
GA40410]
gi|379579858|gb|EHZ44755.1| signal recognition particle protein [Streptococcus pneumoniae
GA40563]
gi|379593308|gb|EHZ58121.1| signal recognition particle protein [Streptococcus pneumoniae
GA47179]
gi|379606262|gb|EHZ71011.1| signal recognition particle protein [Streptococcus pneumoniae
GA47794]
gi|379606741|gb|EHZ71488.1| signal recognition particle protein [Streptococcus pneumoniae
GA47760]
gi|379628801|gb|EHZ93403.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP04]
gi|379633059|gb|EHZ97628.1| signal recognition particle protein [Streptococcus pneumoniae
NP141]
gi|381310025|gb|EIC50858.1| signal recognition particle protein [Streptococcus pneumoniae SV36]
gi|381316497|gb|EIC57245.1| signal recognition particle protein [Streptococcus pneumoniae
459-5]
gi|381317937|gb|EIC58662.1| signal recognition particle protein [Streptococcus pneumoniae SV35]
gi|395573310|gb|EJG33901.1| signal recognition particle protein [Streptococcus pneumoniae
2070035]
gi|395579574|gb|EJG40072.1| signal recognition particle protein [Streptococcus pneumoniae
2070108]
gi|395579792|gb|EJG40287.1| signal recognition particle protein [Streptococcus pneumoniae
2070109]
gi|395595656|gb|EJG55886.1| signal recognition particle protein [Streptococcus pneumoniae
2080076]
gi|395601209|gb|EJG61358.1| signal recognition particle protein [Streptococcus pneumoniae
2061617]
gi|395608805|gb|EJG68897.1| signal recognition particle protein [Streptococcus pneumoniae
2081074]
gi|395613916|gb|EJG73941.1| signal recognition particle protein [Streptococcus pneumoniae
2082239]
gi|395614365|gb|EJG74386.1| signal recognition particle protein [Streptococcus pneumoniae
2082170]
gi|395867840|gb|EJG78960.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR48]
gi|395874115|gb|EJG85203.1| signal recognition particle protein [Streptococcus pneumoniae
GA52612]
gi|395879674|gb|EJG90731.1| signal recognition particle protein [Streptococcus pneumoniae
GA17301]
gi|395882408|gb|EJG93455.1| signal recognition particle protein [Streptococcus pneumoniae
GA04672]
gi|395887220|gb|EJG98235.1| signal recognition particle protein [Streptococcus pneumoniae
GA60190]
gi|395889125|gb|EJH00136.1| signal recognition particle protein [Streptococcus pneumoniae
GA54354]
gi|395902682|gb|EJH13615.1| signal recognition particle protein [Streptococcus pneumoniae
GA60080]
gi|395905866|gb|EJH16771.1| signal recognition particle protein [Streptococcus pneumoniae
GA62331]
gi|395907513|gb|EJH18404.1| signal recognition particle protein [Streptococcus pneumoniae
GA60132]
gi|395914244|gb|EJH25088.1| signal recognition particle protein [Streptococcus pneumoniae
GA47562]
gi|444252298|gb|ELU58762.1| signal recognition particle protein [Streptococcus pneumoniae
PCS8203]
gi|444253616|gb|ELU60071.1| signal recognition particle protein [Streptococcus pneumoniae
PCS8106]
Length = 523
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|421238897|ref|ZP_15695463.1| signal recognition particle protein [Streptococcus pneumoniae
2071247]
gi|421245173|ref|ZP_15701672.1| signal recognition particle protein [Streptococcus pneumoniae
2081685]
gi|395601334|gb|EJG61482.1| signal recognition particle protein [Streptococcus pneumoniae
2071247]
gi|395608609|gb|EJG68702.1| signal recognition particle protein [Streptococcus pneumoniae
2081685]
Length = 523
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKMDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|307277934|ref|ZP_07559018.1| signal recognition particle protein [Enterococcus faecalis TX0860]
gi|306505331|gb|EFM74517.1| signal recognition particle protein [Enterococcus faecalis TX0860]
Length = 472
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 171/346 (49%), Positives = 246/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E EL + PTVI++ GLQG GKTT + KLA +L K + +L+AGDVYRPAAI
Sbjct: 87 LGSETVELNKSPKIPTVIMMTGLQGAGKTTFTGKLAKHLMKTENARPLLIAGDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +LG+Q+ VPV+ GT+ P +I +QGL AK+K D V++DTAGRL ID+A+MDEL
Sbjct: 147 DQLKVLGQQLEVPVFDMGTDANPVEIVRQGLALAKEKKNDYVLIDTAGRLHIDEALMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K + NP E+LLVVDAMTGQ+A + +FN ++GITG ++TK+DGD+RGGAALS++ V
Sbjct: 207 KQIKELANPNEILLVVDAMTGQDAVNVADSFNEQLGITGVVITKMDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PIK VG GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+ +K+
Sbjct: 267 TGAPIKFVGSGEKLTDLEIFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELAQKMKE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+FDFNDF++Q V MG + ++ MIPGM + + V+ K + AM+ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVMGMGPIEDLLKMIPGMSNMPGIENVKVDPKDVARKRAMVLSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ERE P+LL +P RR+R+A SG + +V++++ Q + + M+ +
Sbjct: 387 ERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESKKMMQQM 430
>gi|229549880|ref|ZP_04438605.1| signal recognition particle protein [Enterococcus faecalis ATCC
29200]
gi|255972664|ref|ZP_05423250.1| signal recognition particle protein [Enterococcus faecalis T1]
gi|256959109|ref|ZP_05563280.1| signal recognition particle protein [Enterococcus faecalis DS5]
gi|257079141|ref|ZP_05573502.1| signal recognition particle protein [Enterococcus faecalis JH1]
gi|294781588|ref|ZP_06746924.1| signal recognition particle protein [Enterococcus faecalis PC1.1]
gi|307269511|ref|ZP_07550850.1| signal recognition particle protein [Enterococcus faecalis TX4248]
gi|312951630|ref|ZP_07770525.1| signal recognition particle protein [Enterococcus faecalis TX0102]
gi|384518726|ref|YP_005706031.1| signal recognition particle protein [Enterococcus faecalis 62]
gi|397700009|ref|YP_006537797.1| signal recognition particle protein [Enterococcus faecalis D32]
gi|422708604|ref|ZP_16766132.1| signal recognition particle protein [Enterococcus faecalis TX0027]
gi|422727183|ref|ZP_16783626.1| signal recognition particle protein [Enterococcus faecalis TX0312]
gi|422734180|ref|ZP_16790474.1| signal recognition particle protein [Enterococcus faecalis TX1341]
gi|422869223|ref|ZP_16915743.1| signal recognition particle protein [Enterococcus faecalis TX1467]
gi|229304953|gb|EEN70949.1| signal recognition particle protein [Enterococcus faecalis ATCC
29200]
gi|255963682|gb|EET96158.1| signal recognition particle protein [Enterococcus faecalis T1]
gi|256949605|gb|EEU66237.1| signal recognition particle protein [Enterococcus faecalis DS5]
gi|256987171|gb|EEU74473.1| signal recognition particle protein [Enterococcus faecalis JH1]
gi|294451284|gb|EFG19750.1| signal recognition particle protein [Enterococcus faecalis PC1.1]
gi|306514131|gb|EFM82707.1| signal recognition particle protein [Enterococcus faecalis TX4248]
gi|310630347|gb|EFQ13630.1| signal recognition particle protein [Enterococcus faecalis TX0102]
gi|315037112|gb|EFT49044.1| signal recognition particle protein [Enterococcus faecalis TX0027]
gi|315158208|gb|EFU02225.1| signal recognition particle protein [Enterococcus faecalis TX0312]
gi|315168902|gb|EFU12919.1| signal recognition particle protein [Enterococcus faecalis TX1341]
gi|323480859|gb|ADX80298.1| signal recognition particle protein [Enterococcus faecalis 62]
gi|329571907|gb|EGG53585.1| signal recognition particle protein [Enterococcus faecalis TX1467]
gi|397336648|gb|AFO44320.1| signal recognition particle protein [Enterococcus faecalis D32]
Length = 472
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 171/346 (49%), Positives = 246/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E EL + PTVI++ GLQG GKTT + KLA +L K + +L+AGDVYRPAAI
Sbjct: 87 LGSETVELNKSPKIPTVIMMTGLQGAGKTTFTGKLAKHLMKTENARPLLIAGDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +LG+Q+ VPV+ GT+ P +I +QGL AK+K D V++DTAGRL ID+A+MDEL
Sbjct: 147 DQLKVLGQQLEVPVFDMGTDANPVEIVRQGLALAKEKKNDYVLIDTAGRLHIDEALMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K + NP E+LLVVDAMTGQ+A + +FN ++GITG ++TK+DGD+RGGAALS++ V
Sbjct: 207 KQIKELTNPNEILLVVDAMTGQDAVNVADSFNEQLGITGVVITKMDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PIK VG GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+ +K+
Sbjct: 267 TGAPIKFVGSGEKLTDLEIFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELAQKMKE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+FDFNDF++Q V MG + ++ MIPGM + + V+ K + AM+ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVMGMGPIEDLLKMIPGMSNMPGIENVKVDPKDVARKRAMVLSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ERE P+LL +P RR+R+A SG + +V++++ Q + + M+ +
Sbjct: 387 ERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESKKMMQQM 430
>gi|34540847|ref|NP_905326.1| signal recognition particle protein [Porphyromonas gingivalis W83]
gi|334146894|ref|YP_004509823.1| signal recognition particle protein [Porphyromonas gingivalis
TDC60]
gi|419969944|ref|ZP_14485463.1| signal recognition particle protein [Porphyromonas gingivalis W50]
gi|34397161|gb|AAQ66225.1| signal recognition particle protein [Porphyromonas gingivalis W83]
gi|333804050|dbj|BAK25257.1| signal recognition particle protein [Porphyromonas gingivalis
TDC60]
gi|392611883|gb|EIW94605.1| signal recognition particle protein [Porphyromonas gingivalis W50]
Length = 445
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 181/357 (50%), Positives = 242/357 (67%), Gaps = 6/357 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG ++ K P VIL++GLQG GKTT S KLAN LK KQGK +LVA DVYRPAAI
Sbjct: 86 MGGHSVDINL-KGSPAVILMSGLQGSGKTTFSGKLANMLKSKQGKRPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL+ILGEQ+GVPVY+ KP +IA+ + EAK K DVVI+DTAGRL ID+ MM E+
Sbjct: 145 QQLMILGEQLGVPVYSEPDSKKPVEIARHAIAEAKTKGNDVVIIDTAGRLAIDEEMMREI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K + P EVL VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 EAIKAAIQPNEVLFVVDSMTGQDAVNTAKEFNTRLDFDGVVLTKLDGDTRGGAALSIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+ME ++ F+P+RMA RILGMGD++S VE+AQE + +A ++++KI
Sbjct: 265 VNKPIKFVGTGEKMEAIDAFHPERMADRILGMGDIVSLVERAQEQYDEREARKLEEKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP E
Sbjct: 325 NQFDFNDFLAQIHQIKKMGNLKELASMIPGVGKAI-KDIDIDDDAFKSIEAIIYSMTPHE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 356
R P +L + RRKR+A SG + Q V++L+ Q Q R MK + G +GG +P +
Sbjct: 384 RTHPSIL--NGQRRKRIAMGSGTSIQDVNKLITQFDQTRKMMKTIQG-FKGGKMPKM 437
>gi|306825356|ref|ZP_07458696.1| signal recognition particle protein [Streptococcus sp. oral taxon
071 str. 73H25AP]
gi|304432294|gb|EFM35270.1| signal recognition particle protein [Streptococcus sp. oral taxon
071 str. 73H25AP]
Length = 523
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|414158376|ref|ZP_11414670.1| signal recognition particle protein [Streptococcus sp. F0441]
gi|417794291|ref|ZP_12441549.1| signal recognition particle protein [Streptococcus oralis SK255]
gi|334270135|gb|EGL88542.1| signal recognition particle protein [Streptococcus oralis SK255]
gi|410870921|gb|EKS18878.1| signal recognition particle protein [Streptococcus sp. F0441]
Length = 523
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|315222974|ref|ZP_07864853.1| signal recognition particle protein [Streptococcus anginosus F0211]
gi|315187924|gb|EFU21660.1| signal recognition particle protein [Streptococcus anginosus F0211]
Length = 516
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 174/355 (49%), Positives = 248/355 (69%), Gaps = 13/355 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ G +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEGARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV++ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLTTLGQQIDVPVFSLGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAM 295
FDFNDF+ Q V MG M ++ MIPGM PA +V E E + K A++ +M
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPAMKNFKVDENEIARK--RAIVSSM 383
Query: 296 TPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
TP ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 384 TPTERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQVMQ---GVMSG 433
>gi|289168093|ref|YP_003446362.1| signal recognition particle protein Ffh [Streptococcus mitis B6]
gi|288907660|emb|CBJ22497.1| signal recognition particle protein Ffh [Streptococcus mitis B6]
Length = 523
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFAGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|423720622|ref|ZP_17694804.1| signal recognition particle protein [Geobacillus thermoglucosidans
TNO-09.020]
gi|383365975|gb|EID43266.1| signal recognition particle protein [Geobacillus thermoglucosidans
TNO-09.020]
Length = 446
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 169/336 (50%), Positives = 247/336 (73%), Gaps = 4/336 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT + KLAN L+K+ ++ MLVA D+YRPAAI
Sbjct: 87 MGGEQSKIAVASRPPTVIMMVGLQGAGKTTTTGKLANLLRKRYNRNPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D V++DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLNMPVFSLGDQVSPVEIAKQAIEKAKEEHYDYVLIDTAGRLHIDETLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K + P E+ LVVDAMTGQ+A + +F+ ++GITG ILTKLDGD+RGGAALS++ V
Sbjct: 207 KQMKEIAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGITGVILTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK VG GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TNTPIKFVGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQAAVDEEKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT-PAQVREAEKSLKIMEAMIEAMTPE 298
A F +DFL+Q V ++G + ++ MIPG KI ++ EK + +EA+I +MT E
Sbjct: 327 ATFTLDDFLEQLGQVRKLGPLDEILKMIPGFHKIKGLNNLQIEEKQISRVEAIIRSMTKE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
E+ PE++ S R+KR+A+ SG + Q+V++L+ Q
Sbjct: 387 EKMHPEIINGS--RKKRIAKGSGTSVQEVNRLLKQF 420
>gi|228928893|ref|ZP_04091925.1| Signal recognition particle protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228830700|gb|EEM76305.1| Signal recognition particle protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 449
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 174/351 (49%), Positives = 250/351 (71%), Gaps = 8/351 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI
Sbjct: 87 MGGEQSKIAIANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V
Sbjct: 207 AKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TNTPIKFAGMGEKLDALEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMT 296
+F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT
Sbjct: 327 LSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMT 384
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 385 KLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|417940238|ref|ZP_12583526.1| signal recognition particle protein [Streptococcus oralis SK313]
gi|343389119|gb|EGV01704.1| signal recognition particle protein [Streptococcus oralis SK313]
Length = 523
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|417312813|ref|ZP_12099525.1| signal recognition particle protein [Streptococcus pneumoniae
GA04375]
gi|418227845|ref|ZP_12854463.1| signal recognition particle protein [Streptococcus pneumoniae
3063-00]
gi|419438363|ref|ZP_13978433.1| signal recognition particle protein [Streptococcus pneumoniae
GA13499]
gi|421236406|ref|ZP_15693004.1| signal recognition particle protein [Streptococcus pneumoniae
2071004]
gi|327389521|gb|EGE87866.1| signal recognition particle protein [Streptococcus pneumoniae
GA04375]
gi|353882073|gb|EHE61885.1| signal recognition particle protein [Streptococcus pneumoniae
3063-00]
gi|379538368|gb|EHZ03549.1| signal recognition particle protein [Streptococcus pneumoniae
GA13499]
gi|395602251|gb|EJG62394.1| signal recognition particle protein [Streptococcus pneumoniae
2071004]
Length = 523
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPNRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|307704985|ref|ZP_07641872.1| signal recognition particle protein [Streptococcus mitis SK597]
gi|307621436|gb|EFO00486.1| signal recognition particle protein [Streptococcus mitis SK597]
Length = 523
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|384265181|ref|YP_005420888.1| Signal recognition 54 kDa protein SRP54 [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
gi|387898177|ref|YP_006328473.1| signal recognition particle, subunit [Bacillus amyloliquefaciens
Y2]
gi|452855544|ref|YP_007497227.1| signal recognition particle-like (SRP) GTPase [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|380498534|emb|CCG49572.1| Signal recognition 54 kDa protein SRP54 [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
gi|387172287|gb|AFJ61748.1| signal recognition particle, subunit [Bacillus amyloliquefaciens
Y2]
gi|452079804|emb|CCP21562.1| signal recognition particle-like (SRP) GTPase [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 446
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/352 (48%), Positives = 255/352 (72%), Gaps = 4/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ AK PTVI++ GLQG GKTT + KLAN L KK + +LVA D+YRPAAI
Sbjct: 87 MGGEESKIAVAKRPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IA+Q +E+AK+++ D VI+DTAGRL ID +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIARQAIEKAKEEHHDYVILDTAGRLHIDHELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK V NP E+ LVVD+MTGQ+A + +FN ++G+TG ILTKLDGD+RGGAALS++ V
Sbjct: 207 SGVKEVANPEEIFLVVDSMTGQDAVNVAKSFNDQLGLTGVILTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + ++ A+E+++K+ +
Sbjct: 267 TETPIKFAGMGEKLDALEAFHPERMASRILGMGDVLTLIEKAQATVDEDKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+F +DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I++MT
Sbjct: 327 MSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIKSMTVL 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
E+E+P+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 387 EKEQPDIINAS--RRKRIAKGSGTSVQEVNRLLKQFEEMKKMMKQMTNMSKG 436
>gi|225856949|ref|YP_002738460.1| signal recognition particle protein [Streptococcus pneumoniae
P1031]
gi|444388157|ref|ZP_21186147.1| signal recognition particle protein [Streptococcus pneumoniae
PCS125219]
gi|444389599|ref|ZP_21187514.1| signal recognition particle protein [Streptococcus pneumoniae
PCS70012]
gi|444391435|ref|ZP_21189266.1| signal recognition particle protein [Streptococcus pneumoniae
PCS81218]
gi|444395136|ref|ZP_21192682.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0002]
gi|444397742|ref|ZP_21195225.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0006]
gi|444400272|ref|ZP_21197683.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0007]
gi|444402805|ref|ZP_21199956.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0008]
gi|444405746|ref|ZP_21202601.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0009]
gi|444407359|ref|ZP_21204026.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0010]
gi|444410666|ref|ZP_21207190.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0076]
gi|444413067|ref|ZP_21209383.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0153]
gi|444414317|ref|ZP_21210599.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0199]
gi|444417461|ref|ZP_21213498.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0360]
gi|444419251|ref|ZP_21215129.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0427]
gi|444422413|ref|ZP_21218069.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0446]
gi|225725114|gb|ACO20966.1| signal recognition particle protein [Streptococcus pneumoniae
P1031]
gi|444250307|gb|ELU56788.1| signal recognition particle protein [Streptococcus pneumoniae
PCS125219]
gi|444256062|gb|ELU62400.1| signal recognition particle protein [Streptococcus pneumoniae
PCS70012]
gi|444258455|gb|ELU64777.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0002]
gi|444260399|gb|ELU66707.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0006]
gi|444265804|gb|ELU71793.1| signal recognition particle protein [Streptococcus pneumoniae
PCS81218]
gi|444265854|gb|ELU71840.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0008]
gi|444266821|gb|ELU72753.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0007]
gi|444270955|gb|ELU76706.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0010]
gi|444272373|gb|ELU78090.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0009]
gi|444273226|gb|ELU78899.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0153]
gi|444276885|gb|ELU82417.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0076]
gi|444282616|gb|ELU87869.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0199]
gi|444283732|gb|ELU88918.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0360]
gi|444287298|gb|ELU92231.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0427]
gi|444288242|gb|ELU93140.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0446]
Length = 523
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 245/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPNLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|229545688|ref|ZP_04434413.1| signal recognition particle protein [Enterococcus faecalis TX1322]
gi|255975716|ref|ZP_05426302.1| signal recognition particle protein [Enterococcus faecalis T2]
gi|256619193|ref|ZP_05476039.1| signal recognition particle protein [Enterococcus faecalis ATCC
4200]
gi|256853255|ref|ZP_05558625.1| signal recognition particle protein [Enterococcus faecalis T8]
gi|257082423|ref|ZP_05576784.1| signal recognition particle protein [Enterococcus faecalis E1Sol]
gi|257085055|ref|ZP_05579416.1| signal recognition particle protein [Enterococcus faecalis Fly1]
gi|257090014|ref|ZP_05584375.1| signal recognition particle protein [Enterococcus faecalis CH188]
gi|257416220|ref|ZP_05593214.1| signal recognition particle protein [Enterococcus faecalis ARO1/DG]
gi|257422483|ref|ZP_05599473.1| signal recognition particle protein [Enterococcus faecalis X98]
gi|300860172|ref|ZP_07106259.1| signal recognition particle protein [Enterococcus faecalis TUSoD
Ef11]
gi|307275840|ref|ZP_07556979.1| signal recognition particle protein [Enterococcus faecalis TX2134]
gi|307289238|ref|ZP_07569194.1| signal recognition particle protein [Enterococcus faecalis TX0109]
gi|307291863|ref|ZP_07571734.1| signal recognition particle protein [Enterococcus faecalis TX0411]
gi|312901896|ref|ZP_07761161.1| signal recognition particle protein [Enterococcus faecalis TX0470]
gi|422685856|ref|ZP_16744069.1| signal recognition particle protein, partial [Enterococcus faecalis
TX4000]
gi|422689235|ref|ZP_16747347.1| signal recognition particle protein [Enterococcus faecalis TX0630]
gi|422695111|ref|ZP_16753099.1| signal recognition particle protein [Enterococcus faecalis TX4244]
gi|422699083|ref|ZP_16756956.1| signal recognition particle protein [Enterococcus faecalis TX1346]
gi|422701890|ref|ZP_16759730.1| signal recognition particle protein [Enterococcus faecalis TX1342]
gi|422704606|ref|ZP_16762416.1| signal recognition particle protein [Enterococcus faecalis TX1302]
gi|422706535|ref|ZP_16764233.1| signal recognition particle protein [Enterococcus faecalis TX0043]
gi|422720786|ref|ZP_16777395.1| signal recognition particle protein [Enterococcus faecalis TX0017]
gi|422728773|ref|ZP_16785179.1| signal recognition particle protein [Enterococcus faecalis TX0012]
gi|424761189|ref|ZP_18188771.1| signal recognition particle protein [Enterococcus faecalis R508]
gi|428767136|ref|YP_007153247.1| signal recognition particle protein [Enterococcus faecalis str.
Symbioflor 1]
gi|229309138|gb|EEN75125.1| signal recognition particle protein [Enterococcus faecalis TX1322]
gi|255968588|gb|EET99210.1| signal recognition particle protein [Enterococcus faecalis T2]
gi|256598720|gb|EEU17896.1| signal recognition particle protein [Enterococcus faecalis ATCC
4200]
gi|256711714|gb|EEU26752.1| signal recognition particle protein [Enterococcus faecalis T8]
gi|256990453|gb|EEU77755.1| signal recognition particle protein [Enterococcus faecalis E1Sol]
gi|256993085|gb|EEU80387.1| signal recognition particle protein [Enterococcus faecalis Fly1]
gi|256998826|gb|EEU85346.1| signal recognition particle protein [Enterococcus faecalis CH188]
gi|257158048|gb|EEU88008.1| signal recognition particle protein [Enterococcus faecalis ARO1/DG]
gi|257164307|gb|EEU94267.1| signal recognition particle protein [Enterococcus faecalis X98]
gi|295113085|emb|CBL31722.1| signal recognition particle subunit FFH/SRP54 (srp54) [Enterococcus
sp. 7L76]
gi|300849211|gb|EFK76961.1| signal recognition particle protein [Enterococcus faecalis TUSoD
Ef11]
gi|306497129|gb|EFM66675.1| signal recognition particle protein [Enterococcus faecalis TX0411]
gi|306499947|gb|EFM69308.1| signal recognition particle protein [Enterococcus faecalis TX0109]
gi|306507532|gb|EFM76663.1| signal recognition particle protein [Enterococcus faecalis TX2134]
gi|311291089|gb|EFQ69645.1| signal recognition particle protein [Enterococcus faecalis TX0470]
gi|315029568|gb|EFT41500.1| signal recognition particle protein [Enterococcus faecalis TX4000]
gi|315032040|gb|EFT43972.1| signal recognition particle protein [Enterococcus faecalis TX0017]
gi|315147394|gb|EFT91410.1| signal recognition particle protein [Enterococcus faecalis TX4244]
gi|315150780|gb|EFT94796.1| signal recognition particle protein [Enterococcus faecalis TX0012]
gi|315156150|gb|EFU00167.1| signal recognition particle protein [Enterococcus faecalis TX0043]
gi|315163852|gb|EFU07869.1| signal recognition particle protein [Enterococcus faecalis TX1302]
gi|315169591|gb|EFU13608.1| signal recognition particle protein [Enterococcus faecalis TX1342]
gi|315172461|gb|EFU16478.1| signal recognition particle protein [Enterococcus faecalis TX1346]
gi|315577856|gb|EFU90047.1| signal recognition particle protein [Enterococcus faecalis TX0630]
gi|402402452|gb|EJV35168.1| signal recognition particle protein [Enterococcus faecalis R508]
gi|427185309|emb|CCO72533.1| signal recognition particle protein [Enterococcus faecalis str.
Symbioflor 1]
Length = 472
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 171/346 (49%), Positives = 246/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E EL + PTVI++ GLQG GKTT + KLA +L K + +L+AGDVYRPAAI
Sbjct: 87 LGSETVELNKSPKIPTVIMMTGLQGAGKTTFTGKLAKHLMKTENARPLLIAGDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +LG+Q+ VPV+ GT+ P +I +QGL AK+K D V++DTAGRL ID+A+MDEL
Sbjct: 147 DQLKVLGQQLEVPVFDMGTDANPVEIVRQGLALAKEKKNDYVLIDTAGRLHIDEALMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K + NP E+LLVVDAMTGQ+A + +FN ++GITG ++TK+DGD+RGGAALS++ V
Sbjct: 207 KQIKELANPNEILLVVDAMTGQDAVNVADSFNEQLGITGVVITKMDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PIK VG GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+ +K+
Sbjct: 267 TGAPIKFVGSGEKLTDLEIFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELAQKMKE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+FDFNDF++Q V MG + ++ MIPGM + + V+ K + AM+ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVMGMGPIEDLLKMIPGMSNMPGIENVKVDPKDVARKRAMVLSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ERE P+LL +P RR+R+A SG + +V++++ Q + + M+ +
Sbjct: 387 ERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESKKMMQQM 430
>gi|365904203|ref|ZP_09441962.1| signal recognition particle protein [Lactobacillus versmoldensis
KCTC 3814]
Length = 479
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 173/354 (48%), Positives = 249/354 (70%), Gaps = 7/354 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L A PT+I++ GLQG GKTT + KLA +L + K+ + +AGDVYRPAAI
Sbjct: 87 MGTEAVPLNKAPHIPTIIMMVGLQGAGKTTTAGKLAKHLMENDKARPLFIAGDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +GEQ+ VPVY GT+ P +I K GL +A +K D VI+DTAGRL+ID+ +MDEL
Sbjct: 147 EQLKTIGEQLDVPVYDEGTDQDPVEIVKSGLAQAHEKKNDYVIIDTAGRLEIDEKLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K + P E+L V D+MTGQ AA + F+ ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KRIKELAQPNEILFVADSMTGQVAAKVAAGFDEQLDITGVVLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK +G+GE+++ L+ F+PDRMA RILGMGD+L+ +EKAQ+ Q+ A++M +KI
Sbjct: 267 TGKPIKFIGQGEKLDQLDVFHPDRMANRILGMGDMLTLIEKAQQDYDQKQAQDMAQKIKE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
+FDFNDF+ Q + +MG + ++ MIPGM P A V EK + ++A++ +MTP
Sbjct: 327 NSFDFNDFIDQMDQIQKMGPLDEIMKMIPGMAN-NPALANVNIDEKDISHLKAIVYSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM-GVMEG 350
+ERE P+LL +P RR+R+A SG++ Q+V++++ Q Q + MK + G M+G
Sbjct: 386 QEREDPKLL--NPSRRRRIASGSGRSVQEVNRMIKQFKQSQDMMKQMSKGNMKG 437
>gi|419495553|ref|ZP_14035271.1| signal recognition particle protein [Streptococcus pneumoniae
GA47461]
gi|421206749|ref|ZP_15663804.1| signal recognition particle protein [Streptococcus pneumoniae
2090008]
gi|421229925|ref|ZP_15686592.1| signal recognition particle protein [Streptococcus pneumoniae
2061376]
gi|421292199|ref|ZP_15742934.1| signal recognition particle protein [Streptococcus pneumoniae
GA56348]
gi|421303453|ref|ZP_15754117.1| signal recognition particle protein [Streptococcus pneumoniae
GA17484]
gi|421312131|ref|ZP_15762734.1| signal recognition particle protein [Streptococcus pneumoniae
GA58981]
gi|379595635|gb|EHZ60443.1| signal recognition particle protein [Streptococcus pneumoniae
GA47461]
gi|395575546|gb|EJG36114.1| signal recognition particle protein [Streptococcus pneumoniae
2090008]
gi|395594457|gb|EJG54693.1| signal recognition particle protein [Streptococcus pneumoniae
2061376]
gi|395892327|gb|EJH03318.1| signal recognition particle protein [Streptococcus pneumoniae
GA56348]
gi|395902075|gb|EJH13011.1| signal recognition particle protein [Streptococcus pneumoniae
GA17484]
gi|395910560|gb|EJH21432.1| signal recognition particle protein [Streptococcus pneumoniae
GA58981]
Length = 523
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKVLAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|338811281|ref|ZP_08623506.1| signal recognition particle protein [Acetonema longum DSM 6540]
gi|337276750|gb|EGO65162.1| signal recognition particle protein [Acetonema longum DSM 6540]
Length = 449
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 182/362 (50%), Positives = 246/362 (67%), Gaps = 6/362 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S L + PTVI+L GLQG GKTT + KLAN L++Q K +LVA DVYRPAAI
Sbjct: 87 MGGTQSRLNISSRPPTVIMLVGLQGAGKTTTAGKLANLLQRQNKRPLLVAADVYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+Q+ +PV+T G + P IA++ +++A DVVI+DTAGRL I++ +M EL+
Sbjct: 147 QLQVLGQQLDIPVFTLGDQESPVTIAQKSIDQANALLRDVVIIDTAGRLHINEELMQELR 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K P E+LLVVDAMTGQ+A + FN ++G+ G ILTKLDGD+RGGAALS+K V+
Sbjct: 207 LIKGQAKPHEILLVVDAMTGQDAVGVAEAFNGQLGLDGVILTKLDGDARGGAALSIKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK G GE+++ LEPFYPDRMA RILGMGDVL +EKAQ + + A E++KK+
Sbjct: 267 GCPIKFAGMGEKLDALEPFYPDRMASRILGMGDVLGLIEKAQASLDLDKARELEKKLRKD 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA---EKSLKIMEAMIEAMTP 297
+F F+DFL+Q + V ++GSM +++ MIPGMG Q++ A EK LK EA+I +MT
Sbjct: 327 SFTFDDFLEQLQQVRKLGSMEQILSMIPGMGS-QLKQLKNAELDEKDLKRTEAIIRSMTK 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
+ER+ P L+ S RRKR+A SG Q V++L+ Q + R MK + + G P
Sbjct: 386 KERQDPALINGS--RRKRIASGSGTKVQDVNRLLKQFEETRKMMKRFQLMQKSGRKPKGF 443
Query: 358 NL 359
NL
Sbjct: 444 NL 445
>gi|306829387|ref|ZP_07462577.1| signal recognition particle protein [Streptococcus mitis ATCC 6249]
gi|304428473|gb|EFM31563.1| signal recognition particle protein [Streptococcus mitis ATCC 6249]
Length = 523
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|417848493|ref|ZP_12494438.1| signal recognition particle protein [Streptococcus mitis SK1073]
gi|339452707|gb|EGP65330.1| signal recognition particle protein [Streptococcus mitis SK1073]
Length = 523
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|418977558|ref|ZP_13525374.1| signal recognition particle protein [Streptococcus mitis SK575]
gi|383349745|gb|EID27667.1| signal recognition particle protein [Streptococcus mitis SK575]
Length = 523
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|222097290|ref|YP_002531347.1| signal recognition particle protein [Bacillus cereus Q1]
gi|221241348|gb|ACM14058.1| signal recognition particle protein [Bacillus cereus Q1]
Length = 449
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 174/351 (49%), Positives = 250/351 (71%), Gaps = 8/351 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI
Sbjct: 87 MGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V
Sbjct: 207 AQVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TNTPIKFAGMGEKLDALEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMT 296
+F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT
Sbjct: 327 LSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMT 384
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 385 KLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|358464807|ref|ZP_09174765.1| signal recognition particle protein [Streptococcus sp. oral taxon
058 str. F0407]
gi|357066336|gb|EHI76486.1| signal recognition particle protein [Streptococcus sp. oral taxon
058 str. F0407]
Length = 523
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFIEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|418107712|ref|ZP_12744750.1| signal recognition particle protein [Streptococcus pneumoniae
GA41410]
gi|418176100|ref|ZP_12812694.1| signal recognition particle protein [Streptococcus pneumoniae
GA41437]
gi|353779895|gb|EHD60359.1| signal recognition particle protein [Streptococcus pneumoniae
GA41410]
gi|353841539|gb|EHE21594.1| signal recognition particle protein [Streptococcus pneumoniae
GA41437]
Length = 487
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 51 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 110
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 111 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 170
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 171 RDVKTLAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 230
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 231 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 290
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 291 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 349
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 350 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 397
>gi|417923660|ref|ZP_12567119.1| signal recognition particle protein [Streptococcus mitis SK569]
gi|418966824|ref|ZP_13518531.1| signal recognition particle protein [Streptococcus mitis SK616]
gi|342836725|gb|EGU70934.1| signal recognition particle protein [Streptococcus mitis SK569]
gi|383346269|gb|EID24329.1| signal recognition particle protein [Streptococcus mitis SK616]
Length = 523
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|260893271|ref|YP_003239368.1| signal recognition particle protein [Ammonifex degensii KC4]
gi|260865412|gb|ACX52518.1| signal recognition particle protein [Ammonifex degensii KC4]
Length = 445
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 174/348 (50%), Positives = 243/348 (69%), Gaps = 6/348 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG+ + L A PTV++L GLQG GKTT +AKLA LKKQG+ +LVA DVYRPAA+
Sbjct: 88 MGGQSARLNLAPKPPTVVMLVGLQGSGKTTTAAKLALSLKKQGRRPLLVAADVYRPAAVK 147
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ VPV++ P +IA + EA K DVVI+DTAGRL I++ +M EL+
Sbjct: 148 QLQVLGEQIQVPVWSRPG--NPVEIAASAMHEANHKGYDVVIIDTAGRLHINEELMQELE 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + P EVLLVVDAMTGQ+A + TF+ +G+ G +LTKLDGD+RGGAALS++ V+
Sbjct: 206 EIKARVKPHEVLLVVDAMTGQDAVTVAETFHQRLGLDGVVLTKLDGDTRGGAALSIRAVT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE+++ LEPF+PDRMA RILGMGDVL+ +EKAQ + E A MQK+++S
Sbjct: 266 GCPIKFVGVGEKLDMLEPFHPDRMADRILGMGDVLTLIEKAQSTIDAEQAAAMQKRLLSD 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPE 298
+F+ DFL+ R +MG + ++ ++PG G K +++ EK L +EA+I +MTPE
Sbjct: 326 DFNLEDFLEHLRQFRKMGPLEHILSLLPGFGGVKKLKEELQFDEKELIRVEAIINSMTPE 385
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
ER PE++ S R++R+A+ SG T Q V++L+ Q Q + ++ MG
Sbjct: 386 ERRHPEIIDGS--RKRRIARGSGTTVQDVNRLLKQFEQTKKLIRQFMG 431
>gi|417934365|ref|ZP_12577685.1| signal recognition particle protein [Streptococcus mitis bv. 2 str.
F0392]
gi|340770935|gb|EGR93450.1| signal recognition particle protein [Streptococcus mitis bv. 2 str.
F0392]
Length = 523
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFIEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|422422505|ref|ZP_16499458.1| signal recognition particle protein [Listeria seeligeri FSL S4-171]
gi|313637361|gb|EFS02841.1| signal recognition particle protein [Listeria seeligeri FSL S4-171]
Length = 450
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 174/346 (50%), Positives = 250/346 (72%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI
Sbjct: 87 MGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+ ++D VI+DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEDHLDYVIIDTAGRLHIDETLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K VK + NPTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KQVKEIANPTEILLVVDSMTGQDAVNVAESFNEQLEITGVVLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK V GE+ME +E F+PDRMA RILGMGDVLS +EKAQ + E + M++K+
Sbjct: 267 TGKPIKFVATGEKMEAIETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAMEQKMKD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
+ +DFL Q + V +MG + ++ M+PG GK+ ++ +K L +EA+I++MT
Sbjct: 327 NSMTLDDFLDQLQQVKQMGPLDELLKMMPGAGKMKGLDNMQVDDKQLGHIEAIIKSMTKN 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E++ P+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 387 EKDYPDIINAS--RRKRIARGSGRPIQEINRLLKQFTEMKKMMKQM 430
>gi|229552446|ref|ZP_04441171.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus rhamnosus
LMS2-1]
gi|258539816|ref|YP_003174315.1| signal recognition particle protein [Lactobacillus rhamnosus Lc
705]
gi|385835468|ref|YP_005873242.1| signal recognition particle protein [Lactobacillus rhamnosus ATCC
8530]
gi|418070818|ref|ZP_12708093.1| signal recognition particle protein [Lactobacillus rhamnosus R0011]
gi|421768780|ref|ZP_16205490.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
rhamnosus LRHMDP2]
gi|421771068|ref|ZP_16207729.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
rhamnosus LRHMDP3]
gi|423078848|ref|ZP_17067525.1| signal recognition particle protein [Lactobacillus rhamnosus ATCC
21052]
gi|229314183|gb|EEN80156.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus rhamnosus
LMS2-1]
gi|257151492|emb|CAR90464.1| Signal recognition particle protein [Lactobacillus rhamnosus Lc
705]
gi|355394959|gb|AER64389.1| signal recognition particle protein [Lactobacillus rhamnosus ATCC
8530]
gi|357540238|gb|EHJ24255.1| signal recognition particle protein [Lactobacillus rhamnosus R0011]
gi|357549136|gb|EHJ30984.1| signal recognition particle protein [Lactobacillus rhamnosus ATCC
21052]
gi|411185629|gb|EKS52756.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
rhamnosus LRHMDP2]
gi|411186503|gb|EKS53627.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
rhamnosus LRHMDP3]
Length = 478
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 175/361 (48%), Positives = 249/361 (68%), Gaps = 8/361 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG L A PTVI++AGLQG GKTT KL+ YL + K+ +L+A DVYRPAAI
Sbjct: 87 MGEAAVPLNKAPHIPTVIMMAGLQGAGKTTTVGKLSKYLMENEKARPLLIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ VPV+ GT+ P +I +QGL AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLQTIGKQLNVPVFEMGTDTDPVEIVRQGLATAKENKNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K++K + +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KNIKELAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A+EM +KI
Sbjct: 267 TGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKTYDEKQAQEMAEKIRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
+FDFNDFL Q +++MG + ++ MIPGM A V+ K + M+A++ +MTP+
Sbjct: 327 NSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVYSMTPK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSN 358
ERE P+LL +P RR+R+A SG+ +V++++ Q Q K +M M G++ L
Sbjct: 387 EREDPDLL--NPSRRRRIAAGSGRPVVEVNRMIKQFNQ----SKQMMNQMSKGNMKGLDG 440
Query: 359 L 359
L
Sbjct: 441 L 441
>gi|417686764|ref|ZP_12336040.1| signal recognition particle protein [Streptococcus pneumoniae
GA41301]
gi|419523741|ref|ZP_14063318.1| signal recognition particle protein [Streptococcus pneumoniae
GA13723]
gi|332074900|gb|EGI85372.1| signal recognition particle protein [Streptococcus pneumoniae
GA41301]
gi|379556916|gb|EHZ21964.1| signal recognition particle protein [Streptococcus pneumoniae
GA13723]
Length = 487
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 51 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 110
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 111 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 170
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 171 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 230
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 231 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 290
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 291 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 349
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 350 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 397
>gi|307708829|ref|ZP_07645291.1| signal recognition particle protein [Streptococcus mitis NCTC
12261]
gi|307615195|gb|EFN94406.1| signal recognition particle protein [Streptococcus mitis NCTC
12261]
Length = 523
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 245/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVDIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNTQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|312903448|ref|ZP_07762628.1| signal recognition particle protein [Enterococcus faecalis TX0635]
gi|310633324|gb|EFQ16607.1| signal recognition particle protein [Enterococcus faecalis TX0635]
Length = 472
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 170/336 (50%), Positives = 241/336 (71%), Gaps = 4/336 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E EL + PTVI++ GLQG GKTT + KLA +L K + +L+AGDVYRPAAI
Sbjct: 87 LGSETVELNKSPKIPTVIMMTGLQGAGKTTFTGKLAKHLMKTENARPLLIAGDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +LG+Q+ VPV+ GT+ P +I +QGL AK+K D V++DTAGRL ID+A+MDEL
Sbjct: 147 DQLKVLGQQLEVPVFDMGTDANPVEIVRQGLALAKEKKNDYVLIDTAGRLHIDEALMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K + NP E+LLVVDAMTGQ+A + +FN ++GITG ++TK+DGD+RGGAALS++ V
Sbjct: 207 KQIKELANPNEILLVVDAMTGQDAVNVADSFNEQLGITGVVITKMDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PIK VG GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+ +K+
Sbjct: 267 TGAPIKFVGSGEKLTDLEIFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELAQKMKE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+FDFNDF++Q V MG + ++ MIPGM + + V+ K + AM+ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVMGMGPIEDLLKMIPGMSNMPGIENVKVDPKDVARKRAMVLSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
ERE P+LL +P RR+R+A SG + +V++++ Q
Sbjct: 387 ERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQF 420
>gi|418164597|ref|ZP_12801267.1| signal recognition particle protein [Streptococcus pneumoniae
GA17371]
gi|353829458|gb|EHE09589.1| signal recognition particle protein [Streptococcus pneumoniae
GA17371]
Length = 487
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 51 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 110
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 111 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 170
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 171 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 230
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 231 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 290
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 291 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 349
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 350 EERENPDLL--NPNRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 397
>gi|317055139|ref|YP_004103606.1| signal recognition particle protein [Ruminococcus albus 7]
gi|315447408|gb|ADU20972.1| signal recognition particle protein [Ruminococcus albus 7]
Length = 458
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 168/344 (48%), Positives = 240/344 (69%), Gaps = 3/344 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S++ F P VI++ GLQG GKTT +AKLA K+QG +L+A DVYRPAAID
Sbjct: 87 MGEANSKINFPSKPPCVIMMCGLQGSGKTTHAAKLAKMFKRQGSRPLLIAADVYRPAAID 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL I+ E+ VPV+ G ++ P +I K+GL++AK D+VI+DTAGRL ID+ +MDELK
Sbjct: 147 QLKIVAEKAQVPVFEMG-QIDPRKIVKEGLKQAKDYGNDMVIIDTAGRLHIDEELMDELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K++ P+E++LVVDAM GQ+A + ++F+ +GI ILTKLD D+RGGAALSV V+
Sbjct: 206 DIKKIAEPSEIMLVVDAMIGQDAVKVASSFDEALGIDSVILTKLDSDTRGGAALSVLAVT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GE++++ EPF+P+RMA RILGMGD+L+ +EKA + + +E+AE++ KK+
Sbjct: 266 GKPIKFVGMGEKLDEFEPFHPERMASRILGMGDMLTLIEKASQTVDEEEAEKLAKKMQEE 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FD ND L+Q + + +MGS+ +I M+PG K++ + E +LK EAMI +MT ER
Sbjct: 326 GFDLNDLLEQMKQIHKMGSIKNIISMLPGANKVSDEDLEMGEAALKKTEAMIHSMTKAER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+KP ++ P R++R+A SG V+QL+ Q M+ MK
Sbjct: 386 KKPAII--DPKRKRRIAAGSGTQVSDVNQLLKQYEDMKKMMKQF 427
>gi|327404872|ref|YP_004345710.1| signal recognition particle subunit FFH/SRP54 (srp54) [Fluviicola
taffensis DSM 16823]
gi|327320380|gb|AEA44872.1| signal recognition particle subunit FFH/SRP54 (srp54) [Fluviicola
taffensis DSM 16823]
Length = 449
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 179/343 (52%), Positives = 237/343 (69%), Gaps = 5/343 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG SE+ + P VIL++GLQG GKTT S KLANYL+ K+ K +LVA DVYRPAAI
Sbjct: 86 MGGNESEIQI-QGTPGVILMSGLQGSGKTTFSGKLANYLQTKKNKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +LGEQ+G+ VY+ E P +IA + A+ K +VVIVDTAGRL +D+AMMDE+
Sbjct: 145 DQLHVLGEQLGIEVYSNKEEKDPVKIATDAVIYARSKGFNVVIVDTAGRLAVDEAMMDEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK+ +NPTE L VVD+MTGQ+A FN I G +LTKLDGD+RGGAALS+K +
Sbjct: 205 ARVKKAINPTETLFVVDSMTGQDAVNTAKAFNDRINFDGVVLTKLDGDTRGGAALSIKSI 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+M+ L+ FYP RMA RILGMGDV+S VE+AQE +E+A ++QK+I
Sbjct: 265 VDKPIKFVGTGEKMDALDVFYPKRMADRILGMGDVVSLVERAQEQFNEEEARKLQKRIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + + +MG++ ++GMIPGMGK V + + K +EA+I +MTP+E
Sbjct: 325 DQFDFNDFLGQIQQIKKMGNVKDLMGMIPGMGKAVK-DVDIQDDAFKHIEAIIFSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
R P L+ + R+ R+A SG Q+V++L+ Q + MK
Sbjct: 384 RANPSLM--NGTRKTRIANGSGTNIQEVNKLLKQFEDTKKMMK 424
>gi|312111704|ref|YP_003990020.1| signal recognition particle protein [Geobacillus sp. Y4.1MC1]
gi|336236079|ref|YP_004588695.1| signal recognition particle protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|311216805|gb|ADP75409.1| signal recognition particle protein [Geobacillus sp. Y4.1MC1]
gi|335362934|gb|AEH48614.1| signal recognition particle protein [Geobacillus
thermoglucosidasius C56-YS93]
Length = 446
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 169/336 (50%), Positives = 247/336 (73%), Gaps = 4/336 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT + KLAN L+K+ ++ MLVA D+YRPAAI
Sbjct: 87 MGGEQSKIAVASRPPTVIMMVGLQGAGKTTTTGKLANLLRKRYNRNPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D V++DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLNMPVFSLGDQVSPVEIAKQAIEKAKEEHYDYVLIDTAGRLHIDETLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K + P E+ LVVDAMTGQ+A + +F+ ++GITG ILTKLDGD+RGGAALS++ V
Sbjct: 207 KQMKEIAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGITGVILTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK VG GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TNTPIKFVGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQAAVDEEKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT-PAQVREAEKSLKIMEAMIEAMTPE 298
A F +DFL+Q V ++G + ++ MIPG KI ++ EK + +EA+I +MT E
Sbjct: 327 ATFTLDDFLEQLGQVRKLGPLDEILKMIPGFHKIKGLNNLQIDEKQISRVEAIIRSMTKE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
E+ PE++ S R+KR+A+ SG + Q+V++L+ Q
Sbjct: 387 EKMHPEIINGS--RKKRIAKGSGTSVQEVNRLLKQF 420
>gi|229098314|ref|ZP_04229261.1| Signal recognition particle protein [Bacillus cereus Rock3-29]
gi|229104407|ref|ZP_04235076.1| Signal recognition particle protein [Bacillus cereus Rock3-28]
gi|229117331|ref|ZP_04246709.1| Signal recognition particle protein [Bacillus cereus Rock1-3]
gi|407706304|ref|YP_006829889.1| hypothetical protein MC28_3068 [Bacillus thuringiensis MC28]
gi|423378316|ref|ZP_17355600.1| signal recognition particle protein [Bacillus cereus BAG1O-2]
gi|423441424|ref|ZP_17418330.1| signal recognition particle protein [Bacillus cereus BAG4X2-1]
gi|423448350|ref|ZP_17425229.1| signal recognition particle protein [Bacillus cereus BAG5O-1]
gi|423464498|ref|ZP_17441266.1| signal recognition particle protein [Bacillus cereus BAG6O-1]
gi|423533840|ref|ZP_17510258.1| signal recognition particle protein [Bacillus cereus HuB2-9]
gi|423540891|ref|ZP_17517282.1| signal recognition particle protein [Bacillus cereus HuB4-10]
gi|423547129|ref|ZP_17523487.1| signal recognition particle protein [Bacillus cereus HuB5-5]
gi|423615894|ref|ZP_17591728.1| signal recognition particle protein [Bacillus cereus VD115]
gi|423623079|ref|ZP_17598857.1| signal recognition particle protein [Bacillus cereus VD148]
gi|228666231|gb|EEL21695.1| Signal recognition particle protein [Bacillus cereus Rock1-3]
gi|228679105|gb|EEL33313.1| Signal recognition particle protein [Bacillus cereus Rock3-28]
gi|228685212|gb|EEL39143.1| Signal recognition particle protein [Bacillus cereus Rock3-29]
gi|401128944|gb|EJQ36627.1| signal recognition particle protein [Bacillus cereus BAG5O-1]
gi|401172079|gb|EJQ79300.1| signal recognition particle protein [Bacillus cereus HuB4-10]
gi|401178850|gb|EJQ86023.1| signal recognition particle protein [Bacillus cereus HuB5-5]
gi|401259852|gb|EJR66026.1| signal recognition particle protein [Bacillus cereus VD148]
gi|401260431|gb|EJR66604.1| signal recognition particle protein [Bacillus cereus VD115]
gi|401636582|gb|EJS54336.1| signal recognition particle protein [Bacillus cereus BAG1O-2]
gi|402418085|gb|EJV50385.1| signal recognition particle protein [Bacillus cereus BAG4X2-1]
gi|402420765|gb|EJV53036.1| signal recognition particle protein [Bacillus cereus BAG6O-1]
gi|402464059|gb|EJV95759.1| signal recognition particle protein [Bacillus cereus HuB2-9]
gi|407383989|gb|AFU14490.1| Signal recognition particle protein [Bacillus thuringiensis MC28]
Length = 449
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 173/348 (49%), Positives = 249/348 (71%), Gaps = 8/348 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI
Sbjct: 87 MGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK V NP E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V
Sbjct: 207 AKVKEVANPDEIFLVVDAMTGQDAVNVAQSFHDQLGLTGVVLTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMT 296
+F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT
Sbjct: 327 LSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMT 384
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK +
Sbjct: 385 KLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTM 430
>gi|419780220|ref|ZP_14306070.1| signal recognition particle protein [Streptococcus oralis SK100]
gi|383185379|gb|EIC77875.1| signal recognition particle protein [Streptococcus oralis SK100]
Length = 523
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|116492613|ref|YP_804348.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pediococcus
pentosaceus ATCC 25745]
gi|421894393|ref|ZP_16324882.1| signal recognition particle protein [Pediococcus pentosaceus IE-3]
gi|116102763|gb|ABJ67906.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pediococcus
pentosaceus ATCC 25745]
gi|385272697|emb|CCG90254.1| signal recognition particle protein [Pediococcus pentosaceus IE-3]
Length = 476
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 180/359 (50%), Positives = 243/359 (67%), Gaps = 10/359 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E + L + PT+I+++GLQG GKTT + KLA LK + K+ +L+A DVYRPAAI
Sbjct: 87 MGTEDAPLNKSPKIPTIIMMSGLQGAGKTTTTGKLALKLKNEQKARPLLIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQLV +G+Q+ VPVY GT+V P I + GLE+A + D V +DTAGRLQID+ +M EL
Sbjct: 147 DQLVQVGQQIDVPVYQEGTDVNPVDIVRHGLEQAAENKNDYVFIDTAGRLQIDEKLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
D+K + +P E+LLVVDAMTGQ A FN ++ ITG ILTKLDGD+RGGAALS++ V
Sbjct: 207 ADIKALAHPDEILLVVDAMTGQNAVNTAEGFNEKLDITGVILTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG+GE+MEDL+ F+PDRMA RILGMGD+L+ +EK Q+ Q+ A EM +KI
Sbjct: 267 TGKPIKFVGQGEKMEDLDVFHPDRMASRILGMGDMLTLIEKTQKDFDQKQAAEMTQKIRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG + ++ MIPGM PA V K L+ +A++ +MT
Sbjct: 327 NTFDFNDFVDQLNQVQNMGPIEDIMKMIPGMAN-NPAMQNVNVDPKDLEHTKAIVYSMTK 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 356
ERE P+LL +P RR+R+A SG+ +V++++ Q Q MK +M M G+ +
Sbjct: 386 AERENPDLL--NPSRRRRIAAGSGRPVVEVNRMIKQFNQ----MKKMMNQMSKGNFNGM 438
>gi|42782937|ref|NP_980184.1| signal recognition particle protein [Bacillus cereus ATCC 10987]
gi|49478411|ref|YP_037906.1| signal recognition particle protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52141643|ref|YP_085186.1| signal recognition particle protein [Bacillus cereus E33L]
gi|118479067|ref|YP_896218.1| signal recognition particle subunit FFH/SRP54 (srp54) [Bacillus
thuringiensis str. Al Hakam]
gi|217961265|ref|YP_002339833.1| signal recognition particle protein [Bacillus cereus AH187]
gi|218904975|ref|YP_002452809.1| signal recognition particle protein [Bacillus cereus AH820]
gi|225865826|ref|YP_002751204.1| signal recognition particle protein [Bacillus cereus 03BB102]
gi|228916482|ref|ZP_04080048.1| Signal recognition particle protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228935159|ref|ZP_04097986.1| Signal recognition particle protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228947564|ref|ZP_04109854.1| Signal recognition particle protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228986988|ref|ZP_04147114.1| Signal recognition particle protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229092887|ref|ZP_04224021.1| Signal recognition particle protein [Bacillus cereus Rock3-42]
gi|229123359|ref|ZP_04252563.1| Signal recognition particle protein [Bacillus cereus 95/8201]
gi|229157421|ref|ZP_04285499.1| Signal recognition particle protein [Bacillus cereus ATCC 4342]
gi|229186085|ref|ZP_04313254.1| Signal recognition particle protein [Bacillus cereus BGSC 6E1]
gi|229197955|ref|ZP_04324670.1| Signal recognition particle protein [Bacillus cereus m1293]
gi|301055335|ref|YP_003793546.1| signal recognition particle protein [Bacillus cereus biovar
anthracis str. CI]
gi|375285768|ref|YP_005106207.1| signal recognition particle protein [Bacillus cereus NC7401]
gi|376267740|ref|YP_005120452.1| Signal recognition particle, subunit Ffh [Bacillus cereus F837/76]
gi|384181658|ref|YP_005567420.1| signal recognition particle protein [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|402556034|ref|YP_006597305.1| signal recognition particle protein [Bacillus cereus FRI-35]
gi|423353547|ref|ZP_17331174.1| signal recognition particle protein [Bacillus cereus IS075]
gi|423374358|ref|ZP_17351696.1| signal recognition particle protein [Bacillus cereus AND1407]
gi|423550406|ref|ZP_17526733.1| signal recognition particle protein [Bacillus cereus ISP3191]
gi|423567260|ref|ZP_17543507.1| signal recognition particle protein [Bacillus cereus MSX-A12]
gi|423574549|ref|ZP_17550668.1| signal recognition particle protein [Bacillus cereus MSX-D12]
gi|423604528|ref|ZP_17580421.1| signal recognition particle protein [Bacillus cereus VD102]
gi|42738864|gb|AAS42792.1| signal recognition particle protein [Bacillus cereus ATCC 10987]
gi|49329967|gb|AAT60613.1| signal recognition particle protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51975112|gb|AAU16662.1| signal recognition particle protein [Bacillus cereus E33L]
gi|118418292|gb|ABK86711.1| signal recognition particle subunit FFH/SRP54 (srp54) [Bacillus
thuringiensis str. Al Hakam]
gi|217066657|gb|ACJ80907.1| signal recognition particle protein [Bacillus cereus AH187]
gi|218538723|gb|ACK91121.1| signal recognition particle protein [Bacillus cereus AH820]
gi|225787793|gb|ACO28010.1| signal recognition particle protein [Bacillus cereus 03BB102]
gi|228585534|gb|EEK43637.1| Signal recognition particle protein [Bacillus cereus m1293]
gi|228597261|gb|EEK54912.1| Signal recognition particle protein [Bacillus cereus BGSC 6E1]
gi|228626148|gb|EEK82897.1| Signal recognition particle protein [Bacillus cereus ATCC 4342]
gi|228660135|gb|EEL15771.1| Signal recognition particle protein [Bacillus cereus 95/8201]
gi|228690509|gb|EEL44292.1| Signal recognition particle protein [Bacillus cereus Rock3-42]
gi|228772766|gb|EEM21206.1| Signal recognition particle protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228812084|gb|EEM58415.1| Signal recognition particle protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228824524|gb|EEM70329.1| Signal recognition particle protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228843061|gb|EEM88143.1| Signal recognition particle protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|300377504|gb|ADK06408.1| signal recognition particle protein [Bacillus cereus biovar
anthracis str. CI]
gi|324327742|gb|ADY23002.1| signal recognition particle protein [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|358354295|dbj|BAL19467.1| signal recognition particle protein [Bacillus cereus NC7401]
gi|364513540|gb|AEW56939.1| Signal recognition particle, subunit Ffh [Bacillus cereus F837/76]
gi|401089360|gb|EJP97531.1| signal recognition particle protein [Bacillus cereus IS075]
gi|401094270|gb|EJQ02352.1| signal recognition particle protein [Bacillus cereus AND1407]
gi|401190022|gb|EJQ97072.1| signal recognition particle protein [Bacillus cereus ISP3191]
gi|401212074|gb|EJR18820.1| signal recognition particle protein [Bacillus cereus MSX-D12]
gi|401214348|gb|EJR21078.1| signal recognition particle protein [Bacillus cereus MSX-A12]
gi|401245148|gb|EJR51506.1| signal recognition particle protein [Bacillus cereus VD102]
gi|401797244|gb|AFQ11103.1| signal recognition particle protein [Bacillus cereus FRI-35]
Length = 449
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 174/351 (49%), Positives = 250/351 (71%), Gaps = 8/351 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI
Sbjct: 87 MGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V
Sbjct: 207 AKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TNTPIKFAGMGEKLDALEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMT 296
+F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT
Sbjct: 327 LSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMT 384
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 385 KLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|342163605|ref|YP_004768244.1| signal recognition particle protein [Streptococcus pseudopneumoniae
IS7493]
gi|341933487|gb|AEL10384.1| signal recognition particle protein [Streptococcus pseudopneumoniae
IS7493]
Length = 523
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNDQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|322374427|ref|ZP_08048941.1| signal recognition particle protein [Streptococcus sp. C300]
gi|331266505|ref|YP_004326135.1| signal recognition particle protein [Streptococcus oralis Uo5]
gi|406577203|ref|ZP_11052819.1| signal recognition particle protein [Streptococcus sp. GMD6S]
gi|419778920|ref|ZP_14304801.1| signal recognition particle protein [Streptococcus oralis SK10]
gi|321279927|gb|EFX56966.1| signal recognition particle protein [Streptococcus sp. C300]
gi|326683177|emb|CBZ00795.1| signal recognition particle protein [Streptococcus oralis Uo5]
gi|383186684|gb|EIC79149.1| signal recognition particle protein [Streptococcus oralis SK10]
gi|404460210|gb|EKA06486.1| signal recognition particle protein [Streptococcus sp. GMD6S]
Length = 523
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|239636284|ref|ZP_04677286.1| signal recognition particle protein [Staphylococcus warneri L37603]
gi|417643578|ref|ZP_12293620.1| signal recognition particle protein [Staphylococcus warneri VCU121]
gi|445059843|ref|YP_007385247.1| signal recognition particle protein [Staphylococcus warneri SG1]
gi|239597639|gb|EEQ80134.1| signal recognition particle protein [Staphylococcus warneri L37603]
gi|330685685|gb|EGG97326.1| signal recognition particle protein [Staphylococcus epidermidis
VCU121]
gi|443425900|gb|AGC90803.1| signal recognition particle protein [Staphylococcus warneri SG1]
Length = 455
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 170/346 (49%), Positives = 250/346 (72%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S + A PTV+++ GLQG GKTT + KLA + KK K MLVAGD+YRPAAI
Sbjct: 87 MGGENSTIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAGDIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ VPVY+ G +VKP QI + L AK++++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 DQLQTVGKQLDVPVYSEGDQVKPQQIVQNALAHAKEEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++VK + P E++LVVDAMTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V
Sbjct: 207 QEVKEIAKPDEIMLVVDAMTGQDAVNVAQSFDEQLDVTGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + Q+ A++++KK+
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQDKAKDLEKKMRD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ Q+ ++K + ++A+I++MTP
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDQLNMSDKQIDHIKAIIQSMTPS 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P +L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERANPAMLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|282859593|ref|ZP_06268697.1| signal recognition particle protein [Prevotella bivia JCVIHMP010]
gi|424899550|ref|ZP_18323092.1| signal recognition particle protein [Prevotella bivia DSM 20514]
gi|282587644|gb|EFB92845.1| signal recognition particle protein [Prevotella bivia JCVIHMP010]
gi|388591750|gb|EIM31989.1| signal recognition particle protein [Prevotella bivia DSM 20514]
Length = 453
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 179/362 (49%), Positives = 248/362 (68%), Gaps = 5/362 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE L SRP +IL++GLQG GKTT + KLAN LK K+ K+ +LVA DVYRPAAI
Sbjct: 86 MGGEAVGLKLT-SRPAIILMSGLQGSGKTTFTGKLANMLKAKEHKTPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL ++GEQV VPVY+ ++IA + EAK K DVVI+DTAGRL ID+ MM+E+
Sbjct: 145 EQLKVVGEQVNVPVYSEPENKNVNEIATHAIAEAKAKGNDVVIIDTAGRLAIDEDMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K +NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 ESLKNHVNPDETLFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+ME ++ F+P+RMA RILGMGDV+S VE+AQE +E+A+ +QKKI
Sbjct: 265 VTKPIKFIGTGEKMEAIDVFHPERMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP+E
Sbjct: 325 NKFDFNDFYNQIQQIKKMGNLKDLAAMIPGVGKAI-RDVDIDDNAFKGIEAIIQSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 359
R PE+L + VR++R+A+ SG Q+V++LV Q Q R MK + G G + + +L
Sbjct: 384 RTNPEIL--NNVRKQRIAKGSGTNLQEVNRLVKQFDQTRKMMKMVTGSKMAGMMSKMKDL 441
Query: 360 ED 361
++
Sbjct: 442 KN 443
>gi|188995069|ref|YP_001929321.1| signal recognition particle protein [Porphyromonas gingivalis ATCC
33277]
gi|188594749|dbj|BAG33724.1| signal recognition particle protein [Porphyromonas gingivalis ATCC
33277]
Length = 445
Score = 341 bits (874), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 180/357 (50%), Positives = 242/357 (67%), Gaps = 6/357 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG ++ K P VIL++GLQG GKTT S KLAN LK KQGK +LVA DVYRPAAI
Sbjct: 86 MGGHSVDINL-KGSPAVILMSGLQGSGKTTFSGKLANMLKSKQGKRPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL+ILGEQ+GVPVY+ KP +IA+ + EAK K DVVI+DTAGRL ID+ MM E+
Sbjct: 145 QQLMILGEQLGVPVYSEPDSKKPVEIARHAIAEAKTKGNDVVIIDTAGRLAIDEEMMREI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K + P EVL VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ +
Sbjct: 205 EAIKAAIQPNEVLFVVDSMTGQDAVNTAKEFNTRLDFDGVVLTKLDGDTRGGAALSIRSI 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+ME ++ F+P+RMA RILGMGD++S VE+AQE + +A ++++KI
Sbjct: 265 VNKPIKFVGTGEKMEAIDAFHPERMADRILGMGDIVSLVERAQEQYDEREARKLEEKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP E
Sbjct: 325 NQFDFNDFLAQIHQIKKMGNLKELASMIPGVGKAI-KDIDIDDDAFKSIEAIIYSMTPHE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 356
R P +L + RRKR+A SG + Q V++L+ Q Q R MK + G +GG +P +
Sbjct: 384 RTHPSIL--NGQRRKRIAMGSGTSIQDVNKLITQFDQTRKMMKTIQG-FKGGKMPKM 437
>gi|375362242|ref|YP_005130281.1| Signal recognition 54 kDa protein SRP54 [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
gi|421731732|ref|ZP_16170855.1| signal recognition particle protein [Bacillus amyloliquefaciens
subsp. plantarum M27]
gi|451347031|ref|YP_007445662.1| signal recognition particle protein [Bacillus amyloliquefaciens
IT-45]
gi|371568236|emb|CCF05086.1| Signal recognition 54 kDa protein SRP54 [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
gi|407073945|gb|EKE46935.1| signal recognition particle protein [Bacillus amyloliquefaciens
subsp. plantarum M27]
gi|449850789|gb|AGF27781.1| signal recognition particle protein [Bacillus amyloliquefaciens
IT-45]
Length = 446
Score = 341 bits (874), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 172/352 (48%), Positives = 255/352 (72%), Gaps = 4/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ AK PTVI++ GLQG GKTT + KLAN L KK + +LVA D+YRPAAI
Sbjct: 87 MGGEESKIAAAKRPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IA+Q +E+AK+++ D VI+DTAGRL ID +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIARQAIEKAKEEHHDYVILDTAGRLHIDHELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK V NP E+ LVVD+MTGQ+A + +FN ++G+TG ILTKLDGD+RGGAALS++ V
Sbjct: 207 SGVKEVANPEEIFLVVDSMTGQDAVNVAKSFNDQLGLTGVILTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + ++ A+E+++K+ +
Sbjct: 267 TETPIKFAGMGEKLDALEAFHPERMASRILGMGDVLTLIEKAQATVDEDKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+F +DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I++MT
Sbjct: 327 MSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIKSMTVL 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
E+E+P+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 387 EKEQPDIINAS--RRKRIAKGSGTSVQEVNRLLKQFEEMKKMMKQMTNMSKG 436
>gi|325290414|ref|YP_004266595.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Syntrophobotulus glycolicus DSM 8271]
gi|324965815|gb|ADY56594.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Syntrophobotulus glycolicus DSM 8271]
Length = 461
Score = 341 bits (874), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 178/347 (51%), Positives = 243/347 (70%), Gaps = 4/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S+L + PTV++L GLQG GKTT AKLAN LKKQGK +LVA D+YRPAAI
Sbjct: 88 MGGSESKLAISSKPPTVVMLVGLQGAGKTTHGAKLANMLKKQGKHPLLVACDIYRPAAIK 147
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+ VPV++ G E P +IA + L+ A K D VI+DTAGRL I++ +M EL+
Sbjct: 148 QLQVLGEQIKVPVFSLGQE-NPVKIAGESLDYAGKNGHDTVIIDTAGRLHINEELMGELE 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K V+ P E+LLVVDAMTGQ+A + TFN ++ ++G IL+KLDGD+RGGAA+SV+ V+
Sbjct: 207 DIKAVVQPHEILLVVDAMTGQDAVNVAETFNSKLALSGVILSKLDGDTRGGAAISVRSVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK G GE+M+ LE FYPDRM RILGMGDVL+ +EKAQ + A+E+++KI
Sbjct: 267 GCPIKYAGVGEKMDALEVFYPDRMVSRILGMGDVLTLIEKAQNAFDDKKAKELEEKIRKQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
+DFL Q + +MGS+S V+ MIPG+GK V+ +K +EAMI++MT EER
Sbjct: 327 ELTLDDFLDQINQLRKMGSLSSVLEMIPGIGK-QLKDVQIDDKEFARVEAMIQSMTVEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
+P ++ +S R+KR+A+ SG + Q V +L+ Q Q + MK + G+
Sbjct: 386 TRPAVIKDS--RKKRIARGSGTSVQDVGKLIKQYEQTKKMMKQMSGL 430
>gi|421490816|ref|ZP_15938183.1| signal recognition particle protein [Streptococcus anginosus
SK1138]
gi|400371813|gb|EJP24762.1| signal recognition particle protein [Streptococcus anginosus
SK1138]
Length = 516
Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 174/355 (49%), Positives = 248/355 (69%), Gaps = 13/355 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ G +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEGARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV++ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLTTLGQQIDVPVFSLGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAM 295
FDFNDF+ Q V MG M ++ MIPGM PA +V E E + K A++ +M
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPAMKNFKVDENEIARK--RAIVLSM 383
Query: 296 TPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
TP ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 384 TPTERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQVMQ---GVMSG 433
>gi|383939522|ref|ZP_09992681.1| signal recognition particle protein [Streptococcus pseudopneumoniae
SK674]
gi|383712576|gb|EID69623.1| signal recognition particle protein [Streptococcus pseudopneumoniae
SK674]
Length = 523
Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 245/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFACKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVDIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNDQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|418146492|ref|ZP_12783272.1| signal recognition particle protein [Streptococcus pneumoniae
GA13637]
gi|353813700|gb|EHD93928.1| signal recognition particle protein [Streptococcus pneumoniae
GA13637]
Length = 523
Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKVLAQPNEILLVVDAMIGQEAADVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|385799827|ref|YP_005836231.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Halanaerobium praevalens DSM 2228]
gi|309389191|gb|ADO77071.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Halanaerobium praevalens DSM 2228]
Length = 446
Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 170/347 (48%), Positives = 241/347 (69%), Gaps = 7/347 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG ++ + PT+I++ GLQG GKTT + KLA L K GK+ +LVAGDVYRPAAI
Sbjct: 87 MGGSKEDIAISSEPPTIIMMVGLQGSGKTTSAGKLARKLDKDGKNPLLVAGDVYRPAAIR 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGE++ +PV++ G + P IAK + A N D +I+DTAGRL ID+ MM+EL+
Sbjct: 147 QLQVLGERLDLPVFSMGDDSNPVDIAKGSINYASSHNCDTIILDTAGRLHIDQEMMEELE 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K ++P E+LLVVDAMTGQ+A + F+ + + G +LTK+DGD+RGGAALS+K ++
Sbjct: 207 SIKAAVDPDEILLVVDAMTGQDAVNVAKNFDQRLDVDGIVLTKMDGDARGGAALSIKAIT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK G GE++ DLE F+PDRM+ RILGMGDVLS +EKA++ + QE A+++++K+
Sbjct: 267 GKPIKFAGTGEKLADLETFHPDRMSSRILGMGDVLSLIEKAEQSIDQEKAKKLEEKLRKN 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG---KITPAQVREAEKSLKIMEAMIEAMTP 297
F DF++Q V MG M ++GMIPG+G ++ QV +K L +EA+I +MTP
Sbjct: 327 EFTLEDFMEQMEQVRNMGPMDEILGMIPGLGGAKQLKNMQVD--DKHLDYIEAIISSMTP 384
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
EER PE++ S RRKR+AQ SG + Q+V++L+ Q Q + MK L
Sbjct: 385 EERRDPEVINGS--RRKRIAQGSGTSIQEVNRLLKQFRQTKKMMKQL 429
>gi|418002277|ref|ZP_12642398.1| signal recognition particle, subunit Ffh [Lactobacillus casei
UCD174]
gi|410544439|gb|EKQ18765.1| signal recognition particle, subunit Ffh [Lactobacillus casei
UCD174]
Length = 478
Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 175/361 (48%), Positives = 248/361 (68%), Gaps = 8/361 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG L A PTVI++AGLQG GKTT KL+ YL + +L+A DVYRPAAI
Sbjct: 87 MGEAAVPLNKAPHIPTVIMMAGLQGAGKTTTVGKLSKYLMDNDSARLLLIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ VPV+ GT+V P +I +QGL AK+ D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLQTIGKQLNVPVFEMGTDVDPVEIVRQGLATAKENKNDYVLIDTAGRLQIDEKLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K++K + +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KNIKELAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A EM +KI
Sbjct: 267 TGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKNYDEKQAMEMAEKIRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
+FDFNDFL Q +++MG + ++ MIPGM A V+ K + M+A++ +MTP+
Sbjct: 327 NSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVYSMTPQ 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSN 358
ERE P+LL +P RR+R+A SG+ +V++++ Q Q K +M M G++ L
Sbjct: 387 EREDPDLL--NPSRRRRLAAGSGRPVVEVNRMIKQFNQ----SKQMMNQMSKGNMKGLDG 440
Query: 359 L 359
L
Sbjct: 441 L 441
>gi|357042601|ref|ZP_09104305.1| signal recognition particle protein [Prevotella histicola F0411]
gi|355369252|gb|EHG16650.1| signal recognition particle protein [Prevotella histicola F0411]
Length = 447
Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 179/347 (51%), Positives = 241/347 (69%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE L A +RP +IL++GLQG GKTT + KLA+ LK K+ K+ +LVA DVYRPAAI
Sbjct: 86 MGGESVGLNLA-NRPAIILMSGLQGSGKTTFTGKLAHLLKTKEHKNPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ++GEQVGVPVY+ ++IA L EAK K DVVI+DTAGRL +D+ MM+E+
Sbjct: 145 DQLKVVGEQVGVPVYSEPDNKNVNEIADHALAEAKAKGNDVVIIDTAGRLAVDEEMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K +NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 ESLKNHVNPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A+ +QKKI
Sbjct: 265 VTKPIKFIGTGEKMEAIDVFHPGRMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP+E
Sbjct: 325 NQFDFNDFYNQIQQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIEAIIQSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R PELL S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 384 RTNPELLNNS--RRQRIAKGSGTNIQEVNRLIKQFDQTRKMMKMVTG 428
>gi|402574098|ref|YP_006623441.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfosporosinus meridiei DSM 13257]
gi|402255295|gb|AFQ45570.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfosporosinus meridiei DSM 13257]
Length = 452
Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 177/344 (51%), Positives = 241/344 (70%), Gaps = 4/344 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG +++ A PTVI+L GLQG GKTT +AKLAN LKKQGK +LVA D+YRPAAI
Sbjct: 86 MGGASGKILIASKPPTVIMLVGLQGAGKTTHAAKLANMLKKQGKHPLLVACDIYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG Q+ VPV++ G E P IAK + A + DVVI+DTAGRL I++ +M EL+
Sbjct: 146 QLQVLGAQLNVPVFSMGEE-NPRDIAKASITHANQNGQDVVIIDTAGRLHINEELMGELR 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K + P E+LLVVDAMTGQ+A + +F+ ++G+ G ILTKLDGD+RGGAALS+K V+
Sbjct: 205 DIKGSVKPHEILLVVDAMTGQDAVNVAESFHGDLGLDGVILTKLDGDTRGGAALSIKAVT 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G IK +G GE+M+ LE F+PDRMA RILGMGDVL+ +EKAQE ++ A+EM++K+
Sbjct: 265 GCTIKFIGLGEKMDALEAFHPDRMASRILGMGDVLTLIEKAQESFDEKKAKEMEQKLRKQ 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F +DFL Q + + +MG +S ++ MIPG+GK V EK +EA+I +MT EER
Sbjct: 325 EFTLDDFLDQMQQMKKMGPLSSILEMIPGVGK-QLKDVNIDEKDTAHIEAIIRSMTTEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
KP ++ +S R+KR+A+ SG + Q V +L+ Q QM+ MK
Sbjct: 384 RKPAIIKDS--RKKRIAKGSGTSVQDVGRLLKQFEQMQKMMKQF 425
>gi|410476692|ref|YP_006743451.1| signal recognition particle protein [Streptococcus pneumoniae
gamPNI0373]
gi|406369637|gb|AFS43327.1| signal recognition particle protein [Streptococcus pneumoniae
gamPNI0373]
Length = 487
Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 245/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 51 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 110
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 111 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 170
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 171 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 230
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 231 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 290
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 291 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 349
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 350 EERENPNLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 397
>gi|308173560|ref|YP_003920265.1| signal recognition particle-like (SRP) GTPase [Bacillus
amyloliquefaciens DSM 7]
gi|384159419|ref|YP_005541492.1| signal recognition particle protein [Bacillus amyloliquefaciens
TA208]
gi|384164146|ref|YP_005545525.1| signal recognition particle-like (SRP) GTPase [Bacillus
amyloliquefaciens LL3]
gi|384168466|ref|YP_005549844.1| signal recognition particle-like (SRP) GTPase [Bacillus
amyloliquefaciens XH7]
gi|307606424|emb|CBI42795.1| signal recognition particle-like (SRP) GTPase [Bacillus
amyloliquefaciens DSM 7]
gi|328553507|gb|AEB23999.1| signal recognition particle protein [Bacillus amyloliquefaciens
TA208]
gi|328911701|gb|AEB63297.1| signal recognition particle-like (SRP) GTPase [Bacillus
amyloliquefaciens LL3]
gi|341827745|gb|AEK88996.1| signal recognition particle-like (SRP) GTPase [Bacillus
amyloliquefaciens XH7]
Length = 446
Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 171/352 (48%), Positives = 255/352 (72%), Gaps = 4/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ AK PTVI++ GLQG GKTT + KLAN L KK + +LVA D+YRPAAI
Sbjct: 87 MGGEESKIAVAKRPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IA+Q +E+AK+++ D VI+DTAGRL ID +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIARQAIEKAKEEHHDYVILDTAGRLHIDHELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK V NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V
Sbjct: 207 SGVKEVANPEEIFLVVDSMTGQDAVNVAKSFNDQLGLTGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + ++ A+E+++K+ +
Sbjct: 267 TETPIKFAGMGEKLDALEAFHPERMASRILGMGDVLTLIEKAQATVDEDKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+F +DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I++MT
Sbjct: 327 MSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIKSMTVL 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
E+E+P+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 387 EKEQPDIINAS--RRKRIAKGSGTSVQEVNRLLKQFEEMKKMMKQMTNMSKG 436
>gi|293365278|ref|ZP_06611995.1| signal recognition particle protein [Streptococcus oralis ATCC
35037]
gi|307703819|ref|ZP_07640760.1| signal recognition particle protein [Streptococcus oralis ATCC
35037]
gi|291316728|gb|EFE57164.1| signal recognition particle protein [Streptococcus oralis ATCC
35037]
gi|307622654|gb|EFO01650.1| signal recognition particle protein [Streptococcus oralis ATCC
35037]
Length = 523
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|347549198|ref|YP_004855526.1| putative signal recognition particle protein Ffh [Listeria ivanovii
subsp. ivanovii PAM 55]
gi|346982269|emb|CBW86263.1| Putative signal recognition particle protein Ffh [Listeria ivanovii
subsp. ivanovii PAM 55]
Length = 450
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 173/346 (50%), Positives = 251/346 (72%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI
Sbjct: 87 MGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+ ++D VI+DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEDHLDYVIIDTAGRLHIDETLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K VK + +PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KQVKEIASPTEILLVVDSMTGQDAVNVAESFNEQLEITGVVLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK + GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + E + M++K+
Sbjct: 267 TGKPIKFIATGEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAMEQKMKD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
+ +DFL+Q + V +MG + ++ M+PG GK+ ++ +K L +EA+I++MT
Sbjct: 327 NSMTLDDFLEQLQQVKQMGPLDELLKMMPGAGKMKGLDNMQVDDKQLGHIEAIIKSMTKN 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E++ P+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 387 EKDNPDIINAS--RRKRIARGSGRPIQEINRLLKQFTEMKKMMKQM 430
>gi|429765776|ref|ZP_19298056.1| signal recognition particle protein [Clostridium celatum DSM 1785]
gi|429185629|gb|EKY26603.1| signal recognition particle protein [Clostridium celatum DSM 1785]
Length = 449
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 169/346 (48%), Positives = 250/346 (72%), Gaps = 2/346 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAI 59
MGG S++ F+ PTVI+L GLQG GKTT+ KLA L+K + K +LVA D+YRPAAI
Sbjct: 87 MGGSESKINFSSVGPTVIMLVGLQGAGKTTMCGKLALQLRKDKNKKPLLVACDIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL ++G+Q+ +PV+ G ++ P QIAK+G++ A++ +VVI+DTAGRL ID+ +M EL
Sbjct: 147 KQLEVVGKQIDIPVFQKGDKINPVQIAKEGIQYARENGNNVVIIDTAGRLHIDEELMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
KDVK +NP+E+LLVVD+MTGQ+A + TFN + I+G ILTKLDGD+RGGAALS++ +
Sbjct: 207 KDVKAEVNPSEILLVVDSMTGQDAVNVAETFNEALDISGVILTKLDGDTRGGAALSIRHM 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KP+K +G GE+M D E F+PDRM+ RILGMGDVLS +EKAQE + +++A+E+ +K+M
Sbjct: 267 TQKPVKFIGVGEKMNDFEVFHPDRMSSRILGMGDVLSLIEKAQEAIDEKEAKELGQKMME 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK-ITPAQVREAEKSLKIMEAMIEAMTPE 298
+F ++D+L + ++GS+S+++ MIPG+ K + EK L + ++I +MTP+
Sbjct: 327 NDFTYDDYLTAMDQMKKLGSISKLMEMIPGIPKELKDVDFDAGEKELAKVRSIIYSMTPK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P+L+ S R+KR+A+ SG T Q V++L+ MR +MK +
Sbjct: 387 ERRNPKLIVGSSSRKKRIAKGSGTTLQDVNKLIKGHEVMRKQMKQM 432
>gi|253681736|ref|ZP_04862533.1| signal recognition particle protein [Clostridium botulinum D str.
1873]
gi|253561448|gb|EES90900.1| signal recognition particle protein [Clostridium botulinum D str.
1873]
Length = 451
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 168/333 (50%), Positives = 241/333 (72%), Gaps = 2/333 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S++ F+ + TVI+L GLQG GKTT++ KLA L+K K +LVA D+YRPAAI
Sbjct: 87 MGSTESKIEFSSTGLTVIMLVGLQGAGKTTMAGKLALQLRKNNKKPLLVACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G Q+ +PV++ G +V P IAK +E AK +VVI+DTAGRL ID+A+MDEL+
Sbjct: 147 QLQVVGSQIDIPVFSMGDKVNPVDIAKASIEHAKNNKNNVVIIDTAGRLHIDEALMDELE 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + P E+LLVVD+MTGQ+A + TFN ++ I+G ILTKLDGD+RGGAALS+K V+
Sbjct: 207 NIKTSVKPNEILLVVDSMTGQDAVNVSETFNDKLDISGVILTKLDGDTRGGAALSIKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GE+M DLE F+PDRMA RILGMGDVLS +EKAQE + +E A+E+ K+++
Sbjct: 267 GKPIKYVGLGEKMNDLEVFHPDRMASRILGMGDVLSLIEKAQEAIDEEKAKELGDKMLNL 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPE 298
F+ DF + + +MG ++++I M+PG+ ++ + + EK L +EAMI++MT +
Sbjct: 327 EFNLEDFKESMAQMKKMGPLTKLIEMMPGVNSKQLQGLDLSKGEKELTKIEAMIDSMTLK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 331
ER P +++ SP R++R+A SG QQV++L+
Sbjct: 387 ERRDPSVVSNSPSRKRRIANGSGCNVQQVNKLL 419
>gi|307709396|ref|ZP_07645854.1| signal recognition particle protein [Streptococcus mitis SK564]
gi|307619979|gb|EFN99097.1| signal recognition particle protein [Streptococcus mitis SK564]
Length = 523
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 245/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVDIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|418975192|ref|ZP_13523101.1| signal recognition particle protein [Streptococcus oralis SK1074]
gi|383348563|gb|EID26522.1| signal recognition particle protein [Streptococcus oralis SK1074]
Length = 523
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEMLLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|319939112|ref|ZP_08013476.1| signal recognition particle GTPase [Streptococcus anginosus
1_2_62CV]
gi|319812162|gb|EFW08428.1| signal recognition particle GTPase [Streptococcus anginosus
1_2_62CV]
Length = 516
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 174/355 (49%), Positives = 248/355 (69%), Gaps = 13/355 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ G +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEGARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV++ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFSLGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAM 295
FDFNDF+ Q V MG M ++ MIPGM PA +V E E + K A++ +M
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPAMKNFKVDENEIARK--RAIVSSM 383
Query: 296 TPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
TP ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 384 TPTERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQVMQ---GVMSG 433
>gi|160892009|ref|ZP_02073012.1| hypothetical protein BACUNI_04468 [Bacteroides uniformis ATCC 8492]
gi|270296343|ref|ZP_06202543.1| signal recognition particle protein [Bacteroides sp. D20]
gi|317480461|ref|ZP_07939556.1| signal recognition particle protein [Bacteroides sp. 4_1_36]
gi|423303310|ref|ZP_17281309.1| signal recognition particle protein [Bacteroides uniformis
CL03T00C23]
gi|423307968|ref|ZP_17285958.1| signal recognition particle protein [Bacteroides uniformis
CL03T12C37]
gi|156858487|gb|EDO51918.1| signal recognition particle protein [Bacteroides uniformis ATCC
8492]
gi|270273747|gb|EFA19609.1| signal recognition particle protein [Bacteroides sp. D20]
gi|316903376|gb|EFV25235.1| signal recognition particle protein [Bacteroides sp. 4_1_36]
gi|392688540|gb|EIY81825.1| signal recognition particle protein [Bacteroides uniformis
CL03T00C23]
gi|392688953|gb|EIY82236.1| signal recognition particle protein [Bacteroides uniformis
CL03T12C37]
Length = 440
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 176/357 (49%), Positives = 242/357 (67%), Gaps = 5/357 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE SE+ S+P +IL++GLQG GKTT S KLA LK K+ K +LVA DVYRPAAI
Sbjct: 86 MGGETSEINL-DSKPAIILMSGLQGSGKTTFSGKLARMLKSKKNKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +L EQ+ VP+Y+ P IA+ ++EAK K D+VIVDTAGRL +D+ MM+E+
Sbjct: 145 EQLRVLAEQIDVPMYSEPDSKNPVAIAQNAIQEAKAKGYDLVIVDTAGRLAVDEEMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K+ +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 AAIKKAINPDEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAALSIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VNKPIKFVGTGEKLDAIDQFHPSRMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTPEE
Sbjct: 325 NQFDFNDFLSQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPEE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 356
R P +L S RR+R+A+ SG Q+V++L+ Q Q R MK + G G +P L
Sbjct: 384 RSNPAILNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTGSKMGKMMPKL 438
>gi|401683368|ref|ZP_10815254.1| signal recognition particle protein [Streptococcus sp. BS35b]
gi|400187446|gb|EJO21640.1| signal recognition particle protein [Streptococcus sp. BS35b]
Length = 523
Score = 340 bits (872), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEMLLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|182684220|ref|YP_001835967.1| signal recognition particle protein [Streptococcus pneumoniae
CGSP14]
gi|182629554|gb|ACB90502.1| signal recognition particle protein [Streptococcus pneumoniae
CGSP14]
Length = 523
Score = 340 bits (872), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN L+K+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLQKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|225419757|ref|ZP_03762060.1| hypothetical protein CLOSTASPAR_06095 [Clostridium asparagiforme
DSM 15981]
gi|225041594|gb|EEG51840.1| hypothetical protein CLOSTASPAR_06095 [Clostridium asparagiforme
DSM 15981]
Length = 459
Score = 340 bits (872), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 179/350 (51%), Positives = 250/350 (71%), Gaps = 5/350 (1%)
Query: 1 MGGEVSELVFAK-SRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAA 58
MG E +E+ + TVI++ GLQG GKTT +AKLA LK K+G+ +LVA DVYRPAA
Sbjct: 87 MGSETTEVDLKPGNEITVIMMTGLQGAGKTTTTAKLAAQLKAKKGRKPLLVACDVYRPAA 146
Query: 59 IDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDE 118
I QL I GE+VGVPV+ G + KP IAK +E A K +++VI+DTAGRL ID+AMMDE
Sbjct: 147 IKQLQINGEKVGVPVFAMGDKHKPVDIAKAAMEHAAKNGMNLVILDTAGRLHIDEAMMDE 206
Query: 119 LKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKE 178
L ++K L+ + +LVVDAMTGQ+A + TFN +IGI G +LTKLDGD+RGGAALS++
Sbjct: 207 LVEIKDQLDVHQTILVVDAMTGQDAVNVSETFNNKIGIDGVVLTKLDGDTRGGAALSIRA 266
Query: 179 VSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIM 238
V+GKPI VG GE++ DLE FYPDRMA RILGMGD++S +EKA + +E A EM +K+
Sbjct: 267 VTGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDIMSLIEKATAEIDEEQAREMTQKLR 326
Query: 239 SANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIEAMTP 297
A FD+NDFL Q + + ++G M ++ M+PG+G +++ + E EKS+K +E++I +MT
Sbjct: 327 KAEFDYNDFLAQMQQIKKIGGMGSILSMLPGVGNQLSGVDMDEGEKSMKRVESIILSMTK 386
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
+ER P L+ +P R+KR+A+ +G +V++LV Q QM+ MK + G+
Sbjct: 387 DERANPGLI--NPSRKKRIARGAGVDISEVNRLVKQFDQMKKMMKQMPGM 434
>gi|229047532|ref|ZP_04193122.1| Signal recognition particle protein [Bacillus cereus AH676]
gi|229081100|ref|ZP_04213610.1| Signal recognition particle protein [Bacillus cereus Rock4-2]
gi|229146416|ref|ZP_04274787.1| Signal recognition particle protein [Bacillus cereus BDRD-ST24]
gi|229192014|ref|ZP_04318984.1| Signal recognition particle protein [Bacillus cereus ATCC 10876]
gi|228591565|gb|EEK49414.1| Signal recognition particle protein [Bacillus cereus ATCC 10876]
gi|228637049|gb|EEK93508.1| Signal recognition particle protein [Bacillus cereus BDRD-ST24]
gi|228702144|gb|EEL54620.1| Signal recognition particle protein [Bacillus cereus Rock4-2]
gi|228723779|gb|EEL75134.1| Signal recognition particle protein [Bacillus cereus AH676]
Length = 436
Score = 340 bits (872), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 173/351 (49%), Positives = 250/351 (71%), Gaps = 8/351 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI
Sbjct: 74 MGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAI 133
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +MDEL
Sbjct: 134 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMDEL 193
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V
Sbjct: 194 AKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAV 253
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 254 TNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRT 313
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMT 296
+F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT
Sbjct: 314 LSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMT 371
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 372 KLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 420
>gi|366085823|ref|ZP_09452308.1| signal recognition particle protein [Lactobacillus zeae KCTC 3804]
Length = 478
Score = 340 bits (872), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 175/361 (48%), Positives = 249/361 (68%), Gaps = 8/361 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG L A PTVI++AGLQG GKTT KLA YL K+ +L+A DVYRPAAI
Sbjct: 87 MGEAAVPLNKAPHIPTVIMMAGLQGAGKTTTVGKLAKYLMDNEKARPLLIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ VPV+ GT+ P +I +QGL AK+ D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLQTIGKQLNVPVFEMGTDTDPVEIVRQGLATAKENKNDYVLIDTAGRLQIDEKLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K++K + +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KNIKALAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A+E+ +KI
Sbjct: 267 TGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKNYDEKQAQEVAEKIRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
+FDFNDFL Q +++MG + ++ MIPGM A V+ K + M+A++ +MTP+
Sbjct: 327 NSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVYSMTPQ 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSN 358
ERE P+LL +P RR+R+A SG+ +V++++ Q Q K +M M G++ L
Sbjct: 387 ERENPDLL--NPSRRRRIAGGSGRPVVEVNRMIKQFNQ----SKQMMNQMSKGNMKGLDG 440
Query: 359 L 359
L
Sbjct: 441 L 441
>gi|315303701|ref|ZP_07874216.1| signal recognition particle protein [Listeria ivanovii FSL F6-596]
gi|313627928|gb|EFR96546.1| signal recognition particle protein [Listeria ivanovii FSL F6-596]
Length = 450
Score = 340 bits (872), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 173/346 (50%), Positives = 250/346 (72%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI
Sbjct: 87 MGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+ ++D VI+DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEDHLDYVIIDTAGRLHIDETLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K VK + PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KQVKEIATPTEILLVVDSMTGQDAVNVAESFNEQLEITGVVLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK + GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + E + M++K+
Sbjct: 267 TGKPIKFIATGEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAMEQKMKD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
+ +DFL+Q + V +MG + ++ M+PG GK+ ++ +K L +EA+I++MT
Sbjct: 327 NSMTLDDFLEQLQQVKQMGPLDELLKMMPGAGKMKGLDNMQVDDKQLGHIEAIIKSMTKN 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E++ P+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 387 EKDNPDIINAS--RRKRIARGSGRPIQEINRLLKQFTEMKKMMKQM 430
>gi|419766060|ref|ZP_14292277.1| signal recognition particle protein [Streptococcus mitis SK579]
gi|383354438|gb|EID32001.1| signal recognition particle protein [Streptococcus mitis SK579]
Length = 523
Score = 340 bits (872), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|114567018|ref|YP_754172.1| signal recognition particle protein [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
gi|114337953|gb|ABI68801.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 448
Score = 340 bits (872), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 179/345 (51%), Positives = 242/345 (70%), Gaps = 4/345 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S+L A P++ +L GLQG GKTT AKL L +QG+ +LVAGD+YRPAAI
Sbjct: 87 MGGSESKLTLAAKPPSIYMLVGLQGAGKTTTVAKLGRNLLRQGRRPVLVAGDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQVG+PV++ G + P IA+ LE A+ +N D+VI+DTAGRL I++ +MDELK
Sbjct: 147 QLQVLGEQVGIPVFSMG-QSNPVDIARASLEYARSQNRDIVILDTAGRLHINEELMDELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K +NP E+LLVVDAMTGQ+A + +FN ++G+TG ILTKLDGD+RGGAALSVK V+
Sbjct: 206 QIKSAINPHEILLVVDAMTGQDAVNVAESFNRDLGLTGVILTKLDGDTRGGAALSVKAVT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE+++ LE F+PDRMA RILGMGD+LS VEKAQ + QE A EM++KI
Sbjct: 266 GCPIKYVGMGEKLDALETFFPDRMASRILGMGDILSLVEKAQANIDQEKAREMERKIRKQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA-EKSLKIMEAMIEAMTPEE 299
F DFL+Q + V MG + ++GMIPG+GK E E+ + +EA+I++MT +E
Sbjct: 326 EFTLEDFLEQMQQVRSMGPLDELLGMIPGIGKQMKGFKGEFDEREILRIEAIIKSMTLQE 385
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
R ++ S R+KR+A+ SG Q+V++L+ Q + R MK
Sbjct: 386 RRDTSIINGS--RKKRIARGSGTKVQEVNRLLKQFEESRKLMKQF 428
>gi|212639591|ref|YP_002316111.1| signal recognition particle GTPase [Anoxybacillus flavithermus WK1]
gi|212561071|gb|ACJ34126.1| Signal recognition particle GTPase [Anoxybacillus flavithermus WK1]
Length = 446
Score = 340 bits (872), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 167/336 (49%), Positives = 245/336 (72%), Gaps = 4/336 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ + PTV+++ GLQG GKTT + KLAN L KK + +LVA D+YRPAAI
Sbjct: 87 MGGENSKIAVSNRPPTVVMMVGLQGAGKTTTTGKLANLLRKKHNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK+++ D V++DTAGRL ID+A+MDEL
Sbjct: 147 KQLETLGKQLNIPVFSLGDQVSPVEIAKQAIAKAKEEHYDYVLIDTAGRLHIDEALMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K V P E+ LVVDAMTGQ+A + +FN ++G+TG ILTKLDGD+RGGAALS+K V
Sbjct: 207 KQIKEVTKPDEIFLVVDAMTGQDAVNVAQSFNEQLGLTGVILTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK VG GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TNTPIKFVGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQAAVDEEKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
A+F +DFL+Q V ++G + ++ M+PG K+ ++ EK + +EA+I +MT E
Sbjct: 327 ASFTLDDFLEQLGQVRKLGPLDELLKMLPGANKVKGLNNLQIDEKQISRVEAIIRSMTKE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
E+ P+++ S R+KR+A+ SG T Q V++L+ Q
Sbjct: 387 EKMNPDIINSS--RKKRIAKGSGTTVQDVNRLLKQF 420
>gi|419431672|ref|ZP_13971812.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP05]
gi|419497447|ref|ZP_14037156.1| signal recognition particle protein [Streptococcus pneumoniae
GA47522]
gi|421309699|ref|ZP_15760326.1| signal recognition particle protein [Streptococcus pneumoniae
GA62681]
gi|379600916|gb|EHZ65695.1| signal recognition particle protein [Streptococcus pneumoniae
GA47522]
gi|379630239|gb|EHZ94829.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP05]
gi|395911120|gb|EJH21989.1| signal recognition particle protein [Streptococcus pneumoniae
GA62681]
Length = 523
Score = 340 bits (872), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 245/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQTDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAVGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|335031105|ref|ZP_08524560.1| signal recognition particle protein [Streptococcus anginosus SK52 =
DSM 20563]
gi|333770419|gb|EGL47456.1| signal recognition particle protein [Streptococcus anginosus SK52 =
DSM 20563]
Length = 516
Score = 340 bits (872), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 174/355 (49%), Positives = 247/355 (69%), Gaps = 13/355 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEAARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV++ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFSLGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +KI
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKSLEMAEKIRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAM 295
FDFNDF+ Q V MG M ++ MIPGM PA +V E E + K A++ +M
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPAMKNFKVDENEIARK--RAIVSSM 383
Query: 296 TPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
TP ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 384 TPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQVMQ---GVMSG 433
>gi|257870294|ref|ZP_05649947.1| signal recognition particle protein [Enterococcus gallinarum EG2]
gi|357050559|ref|ZP_09111757.1| signal recognition particle protein [Enterococcus saccharolyticus
30_1]
gi|257804458|gb|EEV33280.1| signal recognition particle protein [Enterococcus gallinarum EG2]
gi|355381212|gb|EHG28339.1| signal recognition particle protein [Enterococcus saccharolyticus
30_1]
Length = 472
Score = 340 bits (872), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 166/332 (50%), Positives = 243/332 (73%), Gaps = 4/332 (1%)
Query: 15 PTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPV 73
PTVI++AGLQG GKTT + KLAN+L K + +++AGDVYRPAAIDQL +LG+Q+ VPV
Sbjct: 101 PTVIMMAGLQGAGKTTFAGKLANHLIKTENARPLMIAGDVYRPAAIDQLKVLGQQLDVPV 160
Query: 74 YTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLL 133
+ GT+V P +I +QG+ A++K D V++DTAGRL ID+ +MDELK +K + P E+LL
Sbjct: 161 FDMGTDVSPVEIVRQGMALAREKKNDYVLIDTAGRLHIDETLMDELKQIKELAQPNEILL 220
Query: 134 VVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERM 193
VVDAMTGQ+A + +FN ++GITG ++TKLDGD+RGGAALS+++V+G PIK G GE++
Sbjct: 221 VVDAMTGQDAVNVADSFNQQLGITGVVITKLDGDTRGGAALSIRQVTGAPIKFTGTGEKL 280
Query: 194 EDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRT 253
DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+ +K+ +FDFNDF++Q
Sbjct: 281 TDLEVFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELAQKMKENSFDFNDFVEQIDQ 340
Query: 254 VARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVR 312
V MG + ++ MIPGM ++ + V+ K + +AM+ +MTP ERE P+LL +P R
Sbjct: 341 VMGMGPIEDLLKMIPGMSQMPGIENVKVDPKQIARQKAMVYSMTPAERENPDLL--NPSR 398
Query: 313 RKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
R+R+A SG + +V++++ Q + R M+ +
Sbjct: 399 RRRIAAGSGNSVVEVNRMIKQFKESRKMMQQM 430
>gi|433446055|ref|ZP_20410186.1| signal recognition particle GTPase [Anoxybacillus flavithermus
TNO-09.006]
gi|432000800|gb|ELK21692.1| signal recognition particle GTPase [Anoxybacillus flavithermus
TNO-09.006]
Length = 446
Score = 340 bits (872), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 168/336 (50%), Positives = 245/336 (72%), Gaps = 4/336 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTV+++ GLQG GKTT + KLAN L KK + +LVA D+YRPAAI
Sbjct: 87 MGGENSKIAVASRPPTVVMMVGLQGAGKTTTTGKLANLLRKKHNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK+++ D V++DTAGRL ID+A+MDEL
Sbjct: 147 KQLETLGKQLDIPVFSLGDQVSPVEIAKQAIVKAKEEHYDYVLIDTAGRLHIDEALMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K V P E+ LVVDAMTGQ+A + +FN ++G+TG ILTKLDGD+RGGAALS+K V
Sbjct: 207 KQIKEVTKPDEIFLVVDAMTGQDAVNVAQSFNEQLGLTGVILTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK VG GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TNTPIKFVGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQTAVDEEKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
A+F +DFL+Q V ++G + ++ M+PG K+ ++ EK + +EA+I +MT E
Sbjct: 327 ASFTLDDFLEQLGQVRKLGPLDELLKMLPGANKVKGLNNLQIDEKQISRVEAIIRSMTKE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
E+ P+++ S R+KR+A+ SG T Q V++L+ Q
Sbjct: 387 EKMNPDIINSS--RKKRIAKGSGTTVQDVNRLLKQF 420
>gi|417915214|ref|ZP_12558835.1| signal recognition particle protein [Streptococcus mitis bv. 2 str.
SK95]
gi|342835328|gb|EGU69579.1| signal recognition particle protein [Streptococcus mitis bv. 2 str.
SK95]
Length = 523
Score = 340 bits (872), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGL++A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLDQAQANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|418008198|ref|ZP_12648066.1| signal recognition particle subunit [Lactobacillus casei UW4]
gi|410547142|gb|EKQ21380.1| signal recognition particle subunit [Lactobacillus casei UW4]
Length = 478
Score = 340 bits (872), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 175/361 (48%), Positives = 248/361 (68%), Gaps = 8/361 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG L A PTVI++AGLQG GKTT KL+ YL + +L+A DVYRPAAI
Sbjct: 87 MGEAAVPLNKAPHIPTVIMMAGLQGAGKTTTVGKLSKYLMDNDSARPLLIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ VPV+ GT+V P +I +QGL AK+ D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLQTIGKQLNVPVFEMGTDVDPVEIVRQGLATAKENKNDYVLIDTAGRLQIDEKLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K++K + +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KNIKELAHPNDILLVVDAMTGQAAVDIAKGFNEQLDITGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A EM +KI
Sbjct: 267 TGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKNYDEKQAMEMAEKIRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
+FDFNDFL Q +++MG + ++ MIPGM A V+ K + M+A++ +MTP+
Sbjct: 327 NSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVYSMTPQ 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSN 358
ERE P+LL +P RR+R+A SG+ +V++++ Q Q K +M M G++ L
Sbjct: 387 EREDPDLL--NPSRRRRLAAGSGRPVVEVNRMIKQFNQ----SKQMMNQMSKGNMKGLDG 440
Query: 359 L 359
L
Sbjct: 441 L 441
>gi|423612062|ref|ZP_17587923.1| signal recognition particle protein [Bacillus cereus VD107]
gi|401247069|gb|EJR53413.1| signal recognition particle protein [Bacillus cereus VD107]
Length = 449
Score = 340 bits (872), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 173/351 (49%), Positives = 250/351 (71%), Gaps = 8/351 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI
Sbjct: 87 MGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V
Sbjct: 207 AKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMT 296
+F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT
Sbjct: 327 LSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMT 384
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 385 KLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|423452854|ref|ZP_17429707.1| signal recognition particle protein [Bacillus cereus BAG5X1-1]
gi|423470059|ref|ZP_17446803.1| signal recognition particle protein [Bacillus cereus BAG6O-2]
gi|423483435|ref|ZP_17460125.1| signal recognition particle protein [Bacillus cereus BAG6X1-2]
gi|423522325|ref|ZP_17498798.1| signal recognition particle protein [Bacillus cereus HuA4-10]
gi|423558592|ref|ZP_17534894.1| signal recognition particle protein [Bacillus cereus MC67]
gi|401139413|gb|EJQ46975.1| signal recognition particle protein [Bacillus cereus BAG5X1-1]
gi|401140986|gb|EJQ48541.1| signal recognition particle protein [Bacillus cereus BAG6X1-2]
gi|401175019|gb|EJQ82222.1| signal recognition particle protein [Bacillus cereus HuA4-10]
gi|401191860|gb|EJQ98882.1| signal recognition particle protein [Bacillus cereus MC67]
gi|402437311|gb|EJV69335.1| signal recognition particle protein [Bacillus cereus BAG6O-2]
Length = 449
Score = 340 bits (872), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 173/351 (49%), Positives = 250/351 (71%), Gaps = 8/351 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI
Sbjct: 87 MGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V
Sbjct: 207 AKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMT 296
+F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT
Sbjct: 327 LSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMT 384
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 385 KVEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|1850607|gb|AAB48050.1|AAB48050 Ffh [Streptococcus mutans]
Length = 516
Score = 340 bits (871), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 171/354 (48%), Positives = 245/354 (69%), Gaps = 11/354 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ILG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKILGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK---ITPAQVREAEKSLKIMEAMIEAMT 296
+FDFNDF++Q V MGSM ++ MIPGM + +V E E + K A++ +MT
Sbjct: 327 NSFDFNDFIEQLDQVQNMGSMEDILKMIPGMANNPALANVEVDEGEIARK--RAIVSSMT 384
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
PEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 385 PEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|340754763|ref|ZP_08691499.1| signal recognition particle protein [Fusobacterium sp. D12]
gi|421499991|ref|ZP_15947014.1| signal recognition particle protein [Fusobacterium necrophorum
subsp. funduliforme Fnf 1007]
gi|313685772|gb|EFS22607.1| signal recognition particle protein [Fusobacterium sp. D12]
gi|402269092|gb|EJU18438.1| signal recognition particle protein [Fusobacterium necrophorum
subsp. funduliforme Fnf 1007]
Length = 449
Score = 340 bits (871), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 176/359 (49%), Positives = 254/359 (70%), Gaps = 8/359 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG + L A PTV++L+GLQG GKTT + KLA +LKKQ + +LVA DVYRPAAI
Sbjct: 86 LGGTNARLTKASKNPTVLMLSGLQGAGKTTFAGKLAKFLKKQNERVLLVAADVYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQV V VY I ++ LE+AK+++ +I+DTAGRL ID+ +M+ELK
Sbjct: 146 QLQVLGEQVEVSVYAEEGHQDVLGICERALEKAKEEHDTYMIIDTAGRLHIDETLMEELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++KR+ P E+LLVVD+M GQ+A L +FN + I G +LTKLDGD+RGGAALS+K V
Sbjct: 206 NIKRLTRPQEILLVVDSMIGQDAVNLAKSFNENLSIDGVVLTKLDGDTRGGAALSIKSVV 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE+++D+E F+PDR+ RILGMGDV+S VEKAQ +++E+A+ +++KI +
Sbjct: 266 GKPIKFIGVGEKLDDIELFHPDRLVSRILGMGDVVSLVEKAQSAIEEEEAKSLEEKIRTQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FD NDFLKQ + + ++GS+ ++ +IPGMG+I + AEK +K +EA+I++MT +ER
Sbjct: 326 KFDLNDFLKQLQNIKKLGSLGSILKLIPGMGQI--GDLAPAEKEMKKVEAIIQSMTKQER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 359
+KPE+L S R++R+A+ SG +++L+ Q QM+ MK + GG +P NL
Sbjct: 384 KKPEILKAS--RKQRIAKGSGTDVADINRLLKQFDQMKTMMK----MFAGGKMPNFPNL 436
>gi|148994098|ref|ZP_01823438.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP9-BS68]
gi|168489114|ref|ZP_02713313.1| signal recognition particle protein [Streptococcus pneumoniae
SP195]
gi|418125923|ref|ZP_12762831.1| signal recognition particle protein [Streptococcus pneumoniae
GA44511]
gi|418191839|ref|ZP_12828342.1| signal recognition particle protein [Streptococcus pneumoniae
GA47388]
gi|418214472|ref|ZP_12841207.1| signal recognition particle protein [Streptococcus pneumoniae
GA54644]
gi|418234483|ref|ZP_12861061.1| signal recognition particle protein [Streptococcus pneumoniae
GA08780]
gi|419484511|ref|ZP_14024287.1| signal recognition particle protein [Streptococcus pneumoniae
GA43257]
gi|419508354|ref|ZP_14048007.1| signal recognition particle protein [Streptococcus pneumoniae
GA49542]
gi|421294078|ref|ZP_15744801.1| signal recognition particle protein [Streptococcus pneumoniae
GA56113]
gi|421301149|ref|ZP_15751819.1| signal recognition particle protein [Streptococcus pneumoniae
GA19998]
gi|147927451|gb|EDK78480.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP9-BS68]
gi|183572579|gb|EDT93107.1| signal recognition particle protein [Streptococcus pneumoniae
SP195]
gi|353796704|gb|EHD77043.1| signal recognition particle protein [Streptococcus pneumoniae
GA44511]
gi|353856912|gb|EHE36879.1| signal recognition particle protein [Streptococcus pneumoniae
GA47388]
gi|353871755|gb|EHE51626.1| signal recognition particle protein [Streptococcus pneumoniae
GA54644]
gi|353887774|gb|EHE67551.1| signal recognition particle protein [Streptococcus pneumoniae
GA08780]
gi|379584022|gb|EHZ48899.1| signal recognition particle protein [Streptococcus pneumoniae
GA43257]
gi|379612072|gb|EHZ76794.1| signal recognition particle protein [Streptococcus pneumoniae
GA49542]
gi|395894368|gb|EJH05348.1| signal recognition particle protein [Streptococcus pneumoniae
GA56113]
gi|395898709|gb|EJH09653.1| signal recognition particle protein [Streptococcus pneumoniae
GA19998]
Length = 523
Score = 340 bits (871), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 245/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVCHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|30021933|ref|NP_833564.1| signal recognition particle protein [Bacillus cereus ATCC 14579]
gi|218235010|ref|YP_002368646.1| signal recognition particle protein [Bacillus cereus B4264]
gi|218898998|ref|YP_002447409.1| signal recognition particle protein [Bacillus cereus G9842]
gi|228902348|ref|ZP_04066505.1| Signal recognition particle protein [Bacillus thuringiensis IBL
4222]
gi|228909670|ref|ZP_04073493.1| Signal recognition particle protein [Bacillus thuringiensis IBL
200]
gi|228922599|ref|ZP_04085899.1| Signal recognition particle protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228940933|ref|ZP_04103492.1| Signal recognition particle protein [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228954121|ref|ZP_04116150.1| Signal recognition particle protein [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228960061|ref|ZP_04121725.1| Signal recognition particle protein [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228973862|ref|ZP_04134438.1| Signal recognition particle protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980452|ref|ZP_04140762.1| Signal recognition particle protein [Bacillus thuringiensis Bt407]
gi|229071343|ref|ZP_04204566.1| Signal recognition particle protein [Bacillus cereus F65185]
gi|229111316|ref|ZP_04240869.1| Signal recognition particle protein [Bacillus cereus Rock1-15]
gi|229129121|ref|ZP_04258094.1| Signal recognition particle protein [Bacillus cereus BDRD-Cer4]
gi|229152044|ref|ZP_04280239.1| Signal recognition particle protein [Bacillus cereus m1550]
gi|229162781|ref|ZP_04290738.1| Signal recognition particle protein [Bacillus cereus R309803]
gi|229180121|ref|ZP_04307465.1| Signal recognition particle protein [Bacillus cereus 172560W]
gi|365159378|ref|ZP_09355559.1| signal recognition particle protein [Bacillus sp. 7_6_55CFAA_CT2]
gi|384187905|ref|YP_005573801.1| signal recognition particle protein [Bacillus thuringiensis serovar
chinensis CT-43]
gi|402558829|ref|YP_006601553.1| signal recognition particle protein [Bacillus thuringiensis HD-771]
gi|410676219|ref|YP_006928590.1| signal recognition particle protein Ffh [Bacillus thuringiensis
Bt407]
gi|423359119|ref|ZP_17336622.1| signal recognition particle protein [Bacillus cereus VD022]
gi|423385348|ref|ZP_17362604.1| signal recognition particle protein [Bacillus cereus BAG1X1-2]
gi|423412350|ref|ZP_17389470.1| signal recognition particle protein [Bacillus cereus BAG3O-2]
gi|423425981|ref|ZP_17403012.1| signal recognition particle protein [Bacillus cereus BAG3X2-2]
gi|423431865|ref|ZP_17408869.1| signal recognition particle protein [Bacillus cereus BAG4O-1]
gi|423437300|ref|ZP_17414281.1| signal recognition particle protein [Bacillus cereus BAG4X12-1]
gi|423503478|ref|ZP_17480070.1| signal recognition particle protein [Bacillus cereus HD73]
gi|423528294|ref|ZP_17504739.1| signal recognition particle protein [Bacillus cereus HuB1-1]
gi|423561749|ref|ZP_17538025.1| signal recognition particle protein [Bacillus cereus MSX-A1]
gi|423582055|ref|ZP_17558166.1| signal recognition particle protein [Bacillus cereus VD014]
gi|423585746|ref|ZP_17561833.1| signal recognition particle protein [Bacillus cereus VD045]
gi|423628938|ref|ZP_17604687.1| signal recognition particle protein [Bacillus cereus VD154]
gi|423635384|ref|ZP_17611037.1| signal recognition particle protein [Bacillus cereus VD156]
gi|423641074|ref|ZP_17616692.1| signal recognition particle protein [Bacillus cereus VD166]
gi|423649708|ref|ZP_17625278.1| signal recognition particle protein [Bacillus cereus VD169]
gi|423656704|ref|ZP_17632003.1| signal recognition particle protein [Bacillus cereus VD200]
gi|434376948|ref|YP_006611592.1| signal recognition particle protein [Bacillus thuringiensis HD-789]
gi|449090786|ref|YP_007423227.1| signal recognition particle protein [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452200284|ref|YP_007480365.1| Signal recognition particle, subunit Ffh SRP54 [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
gi|29897489|gb|AAP10765.1| Signal recognition particle, subunit Ffh/SRP54 [Bacillus cereus
ATCC 14579]
gi|218162967|gb|ACK62959.1| signal recognition particle protein [Bacillus cereus B4264]
gi|218540894|gb|ACK93288.1| signal recognition particle protein [Bacillus cereus G9842]
gi|228603330|gb|EEK60807.1| Signal recognition particle protein [Bacillus cereus 172560W]
gi|228620663|gb|EEK77532.1| Signal recognition particle protein [Bacillus cereus R309803]
gi|228631393|gb|EEK88027.1| Signal recognition particle protein [Bacillus cereus m1550]
gi|228654358|gb|EEL10223.1| Signal recognition particle protein [Bacillus cereus BDRD-Cer4]
gi|228672092|gb|EEL27383.1| Signal recognition particle protein [Bacillus cereus Rock1-15]
gi|228711797|gb|EEL63749.1| Signal recognition particle protein [Bacillus cereus F65185]
gi|228779272|gb|EEM27529.1| Signal recognition particle protein [Bacillus thuringiensis Bt407]
gi|228785887|gb|EEM33890.1| Signal recognition particle protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228799577|gb|EEM46530.1| Signal recognition particle protein [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228805687|gb|EEM52277.1| Signal recognition particle protein [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228818769|gb|EEM64835.1| Signal recognition particle protein [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228837028|gb|EEM82369.1| Signal recognition particle protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228849959|gb|EEM94790.1| Signal recognition particle protein [Bacillus thuringiensis IBL
200]
gi|228857317|gb|EEN01820.1| Signal recognition particle protein [Bacillus thuringiensis IBL
4222]
gi|326941614|gb|AEA17510.1| signal recognition particle protein [Bacillus thuringiensis serovar
chinensis CT-43]
gi|363625376|gb|EHL76417.1| signal recognition particle protein [Bacillus sp. 7_6_55CFAA_CT2]
gi|401084991|gb|EJP93237.1| signal recognition particle protein [Bacillus cereus VD022]
gi|401104418|gb|EJQ12395.1| signal recognition particle protein [Bacillus cereus BAG3O-2]
gi|401110728|gb|EJQ18627.1| signal recognition particle protein [Bacillus cereus BAG3X2-2]
gi|401116621|gb|EJQ24459.1| signal recognition particle protein [Bacillus cereus BAG4O-1]
gi|401120455|gb|EJQ28251.1| signal recognition particle protein [Bacillus cereus BAG4X12-1]
gi|401202006|gb|EJR08871.1| signal recognition particle protein [Bacillus cereus MSX-A1]
gi|401212934|gb|EJR19675.1| signal recognition particle protein [Bacillus cereus VD014]
gi|401233092|gb|EJR39588.1| signal recognition particle protein [Bacillus cereus VD045]
gi|401268483|gb|EJR74531.1| signal recognition particle protein [Bacillus cereus VD154]
gi|401278135|gb|EJR84071.1| signal recognition particle protein [Bacillus cereus VD156]
gi|401280135|gb|EJR86057.1| signal recognition particle protein [Bacillus cereus VD166]
gi|401282988|gb|EJR88885.1| signal recognition particle protein [Bacillus cereus VD169]
gi|401290445|gb|EJR96139.1| signal recognition particle protein [Bacillus cereus VD200]
gi|401635404|gb|EJS53159.1| signal recognition particle protein [Bacillus cereus BAG1X1-2]
gi|401787481|gb|AFQ13520.1| signal recognition particle protein [Bacillus thuringiensis HD-771]
gi|401875505|gb|AFQ27672.1| signal recognition particle protein [Bacillus thuringiensis HD-789]
gi|402451957|gb|EJV83776.1| signal recognition particle protein [Bacillus cereus HuB1-1]
gi|402458832|gb|EJV90572.1| signal recognition particle protein [Bacillus cereus HD73]
gi|409175348|gb|AFV19653.1| signal recognition particle protein Ffh [Bacillus thuringiensis
Bt407]
gi|449024543|gb|AGE79706.1| signal recognition particle protein [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452105677|gb|AGG02617.1| Signal recognition particle, subunit Ffh SRP54 [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
Length = 449
Score = 340 bits (871), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 173/351 (49%), Positives = 250/351 (71%), Gaps = 8/351 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI
Sbjct: 87 MGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V
Sbjct: 207 AKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMT 296
+F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT
Sbjct: 327 LSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMT 384
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 385 KLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|220928159|ref|YP_002505068.1| signal recognition particle protein [Clostridium cellulolyticum
H10]
gi|219998487|gb|ACL75088.1| signal recognition particle protein [Clostridium cellulolyticum
H10]
Length = 448
Score = 340 bits (871), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 172/336 (51%), Positives = 237/336 (70%), Gaps = 2/336 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+G E S++ FA PTV ++AGLQG GKTT + KLAN L+KQGK+ +LVA DVYRPAAI
Sbjct: 88 LGREQSKVTFAPKPPTVFMMAGLQGAGKTTTAGKLANLLRKQGKNPLLVACDVYRPAAIK 147
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG Q+ +PV+T P QIAK+ ++ A+ K D+VI+DTAGRL ID+ +MDEL
Sbjct: 148 QLQVLGNQLNIPVFTLENNQNPVQIAKEAVKFAEMKQNDLVILDTAGRLHIDEKLMDELL 207
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + P E+LLVVD+MTGQ+A + TFN ++GI G +LTKLDGD+RGGAALSVK V+
Sbjct: 208 NIKNTVKPHEILLVVDSMTGQDAVNVSKTFNEKLGIDGVVLTKLDGDTRGGAALSVKSVT 267
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK GE++ D+EPF+PDRMA RILGMGDVLS +EKAQE ++ A E++KK+ +
Sbjct: 268 GKPIKFAAMGEKLNDIEPFFPDRMASRILGMGDVLSLIEKAQEAYDEKKAIELEKKMRTM 327
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F DFL Q + + +MG + ++GM+PG+ + EK + EA+I++MT +ER
Sbjct: 328 TFTLEDFLDQMQQIKKMGPIGDLLGMMPGVDSKALKDIDIDEKQMGRTEAIIQSMTRKER 387
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 336
P ++ S RRKR++ SG T Q+V+ L+ Q Q
Sbjct: 388 LDPSIINGS--RRKRISAGSGTTIQEVNALLKQFEQ 421
>gi|376261083|ref|YP_005147803.1| signal recognition particle protein [Clostridium sp. BNL1100]
gi|373945077|gb|AEY65998.1| signal recognition particle protein [Clostridium sp. BNL1100]
Length = 448
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 171/336 (50%), Positives = 236/336 (70%), Gaps = 2/336 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+G E S++ FA PT+ ++AGLQG GKTT + KLAN L+KQGK+ +LVA DVYRPAAI
Sbjct: 88 LGREQSKVTFAPKPPTIFMMAGLQGAGKTTTAGKLANLLRKQGKNPLLVACDVYRPAAIK 147
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG Q+ +PV+T P QIAK+ + A+ K D+VI+DTAGRL ID+ +MDEL
Sbjct: 148 QLQVLGNQLNIPVFTLENNQNPVQIAKEAVSFAEMKQHDLVIIDTAGRLHIDEKLMDELL 207
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + P E+LLVVD+MTGQ+A + TFN ++GI G +LTKLDGD+RGGAALSVK V+
Sbjct: 208 NIKNSVKPHEILLVVDSMTGQDAVNVSETFNEKLGIDGVVLTKLDGDTRGGAALSVKSVT 267
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK GE++ D+EPF+PDRMA RILGMGDVLS +EKAQE ++ A E++KK+ +
Sbjct: 268 GKPIKFAAMGEKLNDIEPFFPDRMASRILGMGDVLSLIEKAQEAYDEKKAIELEKKMRTM 327
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F DFL Q + + +MG + ++GM+PG+ + EK + EA+I++MT +ER
Sbjct: 328 TFTLEDFLDQMQQIKKMGPIGDLLGMMPGVDSKALKDIDIDEKQMGRTEAIIQSMTRKER 387
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 336
P ++ S RRKR++ SG T Q+V+ L+ Q Q
Sbjct: 388 LDPSIINGS--RRKRISAGSGTTIQEVNALLKQFEQ 421
>gi|326798855|ref|YP_004316674.1| signal recognition particle protein [Sphingobacterium sp. 21]
gi|326549619|gb|ADZ78004.1| signal recognition particle protein [Sphingobacterium sp. 21]
Length = 446
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 179/345 (51%), Positives = 238/345 (68%), Gaps = 5/345 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG ++L K+ PTVIL+AGL G GKTT + KLA YLK K+GK +LVAGDVYRPAAI
Sbjct: 86 MGGTATDLELGKN-PTVILIAGLNGAGKTTFTGKLAKYLKEKRGKKPLLVAGDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +L +QV VPVYT P IA++G+ AK+ +VVIVDTAGRL ID+A+M+E+
Sbjct: 145 DQLEVLAQQVDVPVYTNRESKDPIAIAEEGVAAAKRNGQNVVIVDTAGRLAIDEALMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK NP E+L VVD+MTGQ+A FN + TG +LTKLDGD+RGGAALS+K V
Sbjct: 205 SAVKEATNPHEILFVVDSMTGQDAVNTAKVFNDRLDFTGVVLTKLDGDTRGGAALSIKSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+M+ L+ F+PDRMA RILGMGDV+S VE+AQ+ +++A +QKKI
Sbjct: 265 VNKPIKFIGTGEKMDALDVFHPDRMASRILGMGDVVSLVERAQQQFDEKEAAALQKKIRK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDF+ Q + + +MG+M ++GMIPG+GK + + + K +EA+I +MTP E
Sbjct: 325 NKFDFNDFISQIQQIKKMGNMKDLMGMIPGVGKAI-KDIDIDDDAFKPIEAIIGSMTPYE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
RE P+ + + RR R+A+ SG V++L+ Q MR MK
Sbjct: 384 RENPDAIDQK--RRMRIAKGSGTDINDVNKLMKQFSDMRKMMKQF 426
>gi|191638588|ref|YP_001987754.1| Signal recognition particle protein Ffh [Lactobacillus casei BL23]
gi|227534903|ref|ZP_03964952.1| signal recognition particle protein Ffh [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
gi|239631962|ref|ZP_04674993.1| signal recognition particle GTPase [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|301066648|ref|YP_003788671.1| signal recognition particle GTPase [Lactobacillus casei str. Zhang]
gi|385820302|ref|YP_005856689.1| Signal recognition particle protein [Lactobacillus casei LC2W]
gi|385823497|ref|YP_005859839.1| Signal recognition particle protein [Lactobacillus casei BD-II]
gi|417980376|ref|ZP_12621056.1| signal recognition particle, subunit Ffh [Lactobacillus casei 12A]
gi|417983618|ref|ZP_12624254.1| signal recognition particle, subunit Ffh [Lactobacillus casei 21/1]
gi|417986977|ref|ZP_12627539.1| signal recognition particle, subunit Ffh [Lactobacillus casei 32G]
gi|417993117|ref|ZP_12633467.1| signal recognition particle, subunit Ffh [Lactobacillus casei
CRF28]
gi|417996469|ref|ZP_12636748.1| signal recognition particle, subunit Ffh [Lactobacillus casei M36]
gi|417999336|ref|ZP_12639546.1| signal recognition particle, subunit Ffh [Lactobacillus casei
T71499]
gi|418011036|ref|ZP_12650805.1| signal recognition particle, subunit Ffh [Lactobacillus casei
Lc-10]
gi|190712890|emb|CAQ66896.1| Signal recognition particle protein Ffh [Lactobacillus casei BL23]
gi|227187659|gb|EEI67726.1| signal recognition particle protein Ffh [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
gi|239526427|gb|EEQ65428.1| signal recognition particle GTPase [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|300439055|gb|ADK18821.1| Signal recognition particle GTPase [Lactobacillus casei str. Zhang]
gi|327382629|gb|AEA54105.1| Signal recognition particle protein [Lactobacillus casei LC2W]
gi|327385824|gb|AEA57298.1| Signal recognition particle protein [Lactobacillus casei BD-II]
gi|410524041|gb|EKP98958.1| signal recognition particle, subunit Ffh [Lactobacillus casei 32G]
gi|410524699|gb|EKP99606.1| signal recognition particle, subunit Ffh [Lactobacillus casei 12A]
gi|410527887|gb|EKQ02749.1| signal recognition particle, subunit Ffh [Lactobacillus casei 21/1]
gi|410532029|gb|EKQ06740.1| signal recognition particle, subunit Ffh [Lactobacillus casei
CRF28]
gi|410535315|gb|EKQ09940.1| signal recognition particle, subunit Ffh [Lactobacillus casei M36]
gi|410539356|gb|EKQ13889.1| signal recognition particle, subunit Ffh [Lactobacillus casei
T71499]
gi|410553084|gb|EKQ27092.1| signal recognition particle, subunit Ffh [Lactobacillus casei
Lc-10]
Length = 478
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 175/361 (48%), Positives = 248/361 (68%), Gaps = 8/361 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG L A PTVI++AGLQG GKTT KL+ YL + +L+A DVYRPAAI
Sbjct: 87 MGEAAVPLNKAPHIPTVIMMAGLQGAGKTTTVGKLSKYLMDNDSARPLLIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ VPV+ GT+V P +I +QGL AK+ D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLQTIGKQLNVPVFEMGTDVDPVEIVRQGLATAKENKNDYVLIDTAGRLQIDEKLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K++K + +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KNIKELAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A EM +KI
Sbjct: 267 TGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKNYDEKQAMEMAEKIRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
+FDFNDFL Q +++MG + ++ MIPGM A V+ K + M+A++ +MTP+
Sbjct: 327 NSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVYSMTPQ 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSN 358
ERE P+LL +P RR+R+A SG+ +V++++ Q Q K +M M G++ L
Sbjct: 387 EREDPDLL--NPSRRRRLAAGSGRPVVEVNRMIKQFNQ----SKQMMNQMSKGNMKGLDG 440
Query: 359 L 359
L
Sbjct: 441 L 441
>gi|373111972|ref|ZP_09526207.1| signal recognition particle protein [Fusobacterium necrophorum
subsp. funduliforme 1_1_36S]
gi|419840623|ref|ZP_14364011.1| signal recognition particle protein [Fusobacterium necrophorum
subsp. funduliforme ATCC 51357]
gi|371656540|gb|EHO21865.1| signal recognition particle protein [Fusobacterium necrophorum
subsp. funduliforme 1_1_36S]
gi|386907566|gb|EIJ72273.1| signal recognition particle protein [Fusobacterium necrophorum
subsp. funduliforme ATCC 51357]
Length = 449
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 176/359 (49%), Positives = 254/359 (70%), Gaps = 8/359 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG + L A PTV++L+GLQG GKTT + KLA +LKKQ + +LVA DVYRPAAI
Sbjct: 86 LGGTNARLTKASKNPTVLMLSGLQGAGKTTFAGKLAKFLKKQNERVLLVAADVYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQV V VY I ++ LE+AK+++ +I+DTAGRL ID+ +M+ELK
Sbjct: 146 QLQVLGEQVEVSVYAEEGHQDVLGICERALEKAKEEHDTYMIIDTAGRLHIDETLMEELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++KR+ P E+LLVVD+M GQ+A L +FN + I G +LTKLDGD+RGGAALS+K V
Sbjct: 206 NIKRLTRPQEILLVVDSMIGQDAVNLAKSFNENLSIDGVVLTKLDGDTRGGAALSIKSVV 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE+++D+E F+PDR+ RILGMGDV+S VEKAQ +++E+A+ +++KI +
Sbjct: 266 GKPIKFIGVGEKLDDIELFHPDRLVSRILGMGDVVSLVEKAQSAIEEEEAKSLEEKIRTQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FD NDFLKQ + + ++GS+ ++ +IPGMG+I + AEK +K +EA+I++MT +ER
Sbjct: 326 KFDLNDFLKQLQNIKKLGSLGSILKLIPGMGQI--GDLAPAEKEMKKVEAIIQSMTKQER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 359
+KPE+L S R++R+A+ SG +++L+ Q QM+ MK + GG +P NL
Sbjct: 384 KKPEILKAS--RKQRIAKGSGTDVADINRLLKQFDQMKTMMK----MFAGGKMPNFPNL 436
>gi|330996193|ref|ZP_08320083.1| signal recognition particle protein [Paraprevotella xylaniphila YIT
11841]
gi|329573697|gb|EGG55288.1| signal recognition particle protein [Paraprevotella xylaniphila YIT
11841]
Length = 451
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 178/347 (51%), Positives = 238/347 (68%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE +EL + P+VIL+AGL G GKTT+S KLA LK K+ K+ +L A D+YRPAAI
Sbjct: 86 MGGETAELNL-QGHPSVILMAGLNGAGKTTLSGKLALMLKSKKRKNPLLAACDIYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +LGEQ+G+PVY+ QIA+ ++EAK K DVVIVDTAGRL +D+ MM E+
Sbjct: 145 EQLKVLGEQIGIPVYSEPDNKDAVQIAQNAVKEAKAKGYDVVIVDTAGRLAVDEQMMQEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K +NP E L VVDAMTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 AAIKHGINPDETLFVVDAMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+ME ++ F+P RMA RILGMGD++S VEKAQE +E+A +QKKI
Sbjct: 265 VNKPIKFVGTGEKMEAIDQFHPSRMADRILGMGDIVSLVEKAQEQYDEEEARRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDF+ Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP E
Sbjct: 325 NQFDFNDFMSQIQQIKKMGNLKDLASMIPGVGKAL-KDVEIDDNAFKSIEAIIQSMTPRE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 384 RTNPEILNTS--RRQRIAKGSGTNIQEVNRLIKQFDQTRKMMKMVTG 428
>gi|418014537|ref|ZP_12654133.1| signal recognition particle, subunit Ffh [Lactobacillus casei
Lpc-37]
gi|410553585|gb|EKQ27587.1| signal recognition particle, subunit Ffh [Lactobacillus casei
Lpc-37]
Length = 478
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 175/361 (48%), Positives = 247/361 (68%), Gaps = 8/361 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG L A PTVI++AGLQG GKTT KL+ YL + +L+A DVYRPAAI
Sbjct: 87 MGEAAVPLNKAPHIPTVIMMAGLQGAGKTTTVGKLSKYLMDNDSARPLLIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ VPV+ GT+V P +I +QGL AK+ D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLQTIGKQLNVPVFEMGTDVDPVEIVRQGLATAKENKNDYVLIDTAGRLQIDEKLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K++K + +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KNIKELAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ ++ A EM +KI
Sbjct: 267 TGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQNNYDEKQAMEMAEKIRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
+FDFNDFL Q +++MG + ++ MIPGM A V+ K + M+A++ +MTP+
Sbjct: 327 NSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVYSMTPQ 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSN 358
ERE P+LL +P RR+R+A SG+ +V++++ Q Q K +M M G++ L
Sbjct: 387 EREDPDLL--NPSRRRRLAAGSGRPVVEVNRMIKQFNQ----SKQMMNQMSKGNMKGLDG 440
Query: 359 L 359
L
Sbjct: 441 L 441
>gi|229031475|ref|ZP_04187475.1| Signal recognition particle protein [Bacillus cereus AH1271]
gi|229174511|ref|ZP_04302043.1| Signal recognition particle protein [Bacillus cereus MM3]
gi|423401313|ref|ZP_17378486.1| signal recognition particle protein [Bacillus cereus BAG2X1-2]
gi|423457972|ref|ZP_17434769.1| signal recognition particle protein [Bacillus cereus BAG5X2-1]
gi|423477983|ref|ZP_17454698.1| signal recognition particle protein [Bacillus cereus BAG6X1-1]
gi|228609071|gb|EEK66361.1| Signal recognition particle protein [Bacillus cereus MM3]
gi|228729764|gb|EEL80744.1| Signal recognition particle protein [Bacillus cereus AH1271]
gi|401148356|gb|EJQ55849.1| signal recognition particle protein [Bacillus cereus BAG5X2-1]
gi|401654303|gb|EJS71846.1| signal recognition particle protein [Bacillus cereus BAG2X1-2]
gi|402428145|gb|EJV60242.1| signal recognition particle protein [Bacillus cereus BAG6X1-1]
Length = 449
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 173/351 (49%), Positives = 250/351 (71%), Gaps = 8/351 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI
Sbjct: 87 MGGEQSKIAVANRPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V
Sbjct: 207 AKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMT 296
+F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT
Sbjct: 327 LSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMT 384
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 385 KLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|409997447|ref|YP_006751848.1| signal recognition particle protein [Lactobacillus casei W56]
gi|406358459|emb|CCK22729.1| Signal recognition particle protein [Lactobacillus casei W56]
Length = 479
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 175/361 (48%), Positives = 248/361 (68%), Gaps = 8/361 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG L A PTVI++AGLQG GKTT KL+ YL + +L+A DVYRPAAI
Sbjct: 88 MGEAAVPLNKAPHIPTVIMMAGLQGAGKTTTVGKLSKYLMDNDSARPLLIAADVYRPAAI 147
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ VPV+ GT+V P +I +QGL AK+ D V++DTAGRLQID+ +M+EL
Sbjct: 148 DQLQTIGKQLNVPVFEMGTDVDPVEIVRQGLATAKENKNDYVLIDTAGRLQIDEKLMNEL 207
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K++K + +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 208 KNIKELAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAALSIRAV 267
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A EM +KI
Sbjct: 268 TGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKNYDEKQAMEMAEKIRE 327
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
+FDFNDFL Q +++MG + ++ MIPGM A V+ K + M+A++ +MTP+
Sbjct: 328 NSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVYSMTPQ 387
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSN 358
ERE P+LL +P RR+R+A SG+ +V++++ Q Q K +M M G++ L
Sbjct: 388 EREDPDLL--NPSRRRRLAAGSGRPVVEVNRMIKQFNQ----SKQMMNQMSKGNMKGLDG 441
Query: 359 L 359
L
Sbjct: 442 L 442
>gi|30263848|ref|NP_846225.1| signal recognition particle protein [Bacillus anthracis str. Ames]
gi|47529273|ref|YP_020622.1| signal recognition particle protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49186695|ref|YP_029947.1| signal recognition particle protein [Bacillus anthracis str.
Sterne]
gi|227813247|ref|YP_002813256.1| signal recognition particle protein [Bacillus anthracis str. CDC
684]
gi|229602210|ref|YP_002868082.1| signal recognition particle protein [Bacillus anthracis str. A0248]
gi|254683447|ref|ZP_05147307.1| signal recognition particle protein [Bacillus anthracis str.
CNEVA-9066]
gi|254721376|ref|ZP_05183165.1| signal recognition particle protein [Bacillus anthracis str. A1055]
gi|254735883|ref|ZP_05193589.1| signal recognition particle protein [Bacillus anthracis str.
Western North America USA6153]
gi|254739516|ref|ZP_05197213.1| signal recognition particle protein [Bacillus anthracis str. Kruger
B]
gi|254751176|ref|ZP_05203215.1| signal recognition particle protein [Bacillus anthracis str.
Vollum]
gi|254756724|ref|ZP_05208753.1| signal recognition particle protein [Bacillus anthracis str.
Australia 94]
gi|386737667|ref|YP_006210848.1| Signal recognition particle protein [Bacillus anthracis str. H9401]
gi|421639600|ref|ZP_16080191.1| signal recognition particle protein [Bacillus anthracis str. BF1]
gi|30258492|gb|AAP27711.1| signal recognition particle protein [Bacillus anthracis str. Ames]
gi|47504421|gb|AAT33097.1| signal recognition particle protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49180622|gb|AAT55998.1| signal recognition particle protein [Bacillus anthracis str.
Sterne]
gi|227003495|gb|ACP13238.1| signal recognition particle protein [Bacillus anthracis str. CDC
684]
gi|229266618|gb|ACQ48255.1| signal recognition particle protein [Bacillus anthracis str. A0248]
gi|384387519|gb|AFH85180.1| Signal recognition particle protein [Bacillus anthracis str. H9401]
gi|403393265|gb|EJY90510.1| signal recognition particle protein [Bacillus anthracis str. BF1]
Length = 449
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 173/351 (49%), Positives = 249/351 (70%), Gaps = 8/351 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI
Sbjct: 87 MGGEQSKIAIANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAG L ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGHLHIDEELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V
Sbjct: 207 AKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TNTPIKFAGMGEKLDALEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMT 296
+F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT
Sbjct: 327 LSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMT 384
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 385 KLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|381209995|ref|ZP_09917066.1| signal recognition particle protein [Lentibacillus sp. Grbi]
Length = 447
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 169/354 (47%), Positives = 255/354 (72%), Gaps = 8/354 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ + PTVI++AGLQG GKTT S KLA++L KK + +LVA D+YRPAAI
Sbjct: 87 MGGEQSKIAVSDRPPTVIMMAGLQGAGKTTTSGKLASHLRKKHNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G Q+G+PV++ GT+ P IAK+ +E+AK+++ D VI+DTAGRL +D+ +M EL
Sbjct: 147 DQLETVGHQLGMPVFSKGTDANPVDIAKEAVEQAKEEHNDYVIIDTAGRLHVDEDLMGEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K +NP E+ LVVDAMTGQ+A + +FN ++ ++G +LTKLDGD+RGGAALS++ V
Sbjct: 207 EQIKAAVNPDEIFLVVDAMTGQDAVNVAESFNEQLELSGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PIK G GE+++ LEPF P+ MA RILGMGDVLS ++KA+ + ++ A+E+++K+ +
Sbjct: 267 TGTPIKFAGMGEKLDQLEPFRPESMASRILGMGDVLSLIDKAETNVNEQQAKELEEKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK---ITPAQVREAEKSLKIMEAMIEAMT 296
+F F+DFL+Q V +MG + ++ MIPG K + AQ+ EK L +EA+I++MT
Sbjct: 327 MSFTFDDFLEQMGQVKKMGPLEDLMNMIPGANKMKGLKNAQID--EKQLVYVEAIIQSMT 384
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
+ER+ P L+ S R+KR+A+ SG + QV++L+ Q +M+ MK + + +G
Sbjct: 385 KDERQDPSLMNAS--RKKRIAKGSGTSVSQVNRLLKQFNEMKKMMKQMTNMQKG 436
>gi|423335535|ref|ZP_17313310.1| signal recognition particle protein [Lactobacillus reuteri ATCC
53608]
gi|337728765|emb|CCC03884.1| signal recognition particle protein [Lactobacillus reuteri ATCC
53608]
Length = 481
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 177/364 (48%), Positives = 245/364 (67%), Gaps = 13/364 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L A PTVI++ GLQG GKTT + KLA LK + + M +A DVYRPAAI
Sbjct: 87 MGEEAVPLNKAPHIPTVIMMVGLQGAGKTTTAGKLALRLKNENHARPMFIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL + +Q+ VPV+ GT+V P +I ++G+E AKK + D VI+DTAGRLQID+ +MDEL
Sbjct: 147 TQLQQVADQIDVPVFEKGTDVDPVEIVREGMEVAKKNHNDYVIIDTAGRLQIDEQLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++K ++NP E+LLV+D+MTGQ A F+ ++ ITG ILTKLDGD+RGGAA+S++ V
Sbjct: 207 ANIKELVNPNEILLVIDSMTGQNAVNTAQGFDDKLNITGVILTKLDGDTRGGAAMSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG GE+MEDL+ F+PDRMA RILGMGD+++ +EKAQ+ +E A+E K+
Sbjct: 267 TGKPIKFVGEGEKMEDLDVFHPDRMASRILGMGDMMTLIEKAQKNFDEEQAQETMDKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FD+NDFL Q V +MG + +I M+PGM PA + K + A++ +MTP
Sbjct: 327 NTFDYNDFLAQMDQVTKMGPLENIIKMMPGMAN-NPALKNLNLDPKQFAHIRAIVLSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-------NLMGVMEG 350
EERE P+L+ +P RR+R+A +G+ +V++++ Q QMR MK N M M G
Sbjct: 386 EERENPDLM--NPSRRRRLAAGAGRPIVEVNRMIKQFNQMRKMMKQVTNGNFNGMQNMFG 443
Query: 351 GSLP 354
G +P
Sbjct: 444 GQMP 447
>gi|223043736|ref|ZP_03613779.1| signal recognition particle protein [Staphylococcus capitis SK14]
gi|417907136|ref|ZP_12550912.1| signal recognition particle protein [Staphylococcus capitis VCU116]
gi|222442833|gb|EEE48935.1| signal recognition particle protein [Staphylococcus capitis SK14]
gi|341596767|gb|EGS39358.1| signal recognition particle protein [Staphylococcus capitis VCU116]
Length = 455
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 167/346 (48%), Positives = 252/346 (72%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + A PTV+++ GLQG GKTT + KLA + KK K MLVAGD+YRPAAI
Sbjct: 87 MGGENTSIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAGDIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ +PVY+ G +V+P QI + L+ AK++++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 DQLQTVGKQIDIPVYSEGDQVQPQQIVENALKHAKEEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++VK + P E++LVVDAMTGQ+A + +F+ ++ ++G LTKLDGD+RGGAALS++ V
Sbjct: 207 QEVKEISKPDEIMLVVDAMTGQDAVNVAQSFDDQLDVSGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ ++K + ++A+I++MTP+
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER PE L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERSNPETLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|220931573|ref|YP_002508481.1| signal recognition particle protein [Halothermothrix orenii H 168]
gi|219992883|gb|ACL69486.1| signal recognition particle protein [Halothermothrix orenii H 168]
Length = 444
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 183/352 (51%), Positives = 251/352 (71%), Gaps = 5/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S+L + PT+I+L GLQG GKTT +AKLA +LKK+GK +LVAGD+YRPAAI
Sbjct: 87 MGGNKSDLSISSKPPTIIMLVGLQGAGKTTSAAKLARFLKKKGKKPLLVAGDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+++ +PV++ G + P I+K G+ +A+ DVVI+DTAGRL ID+ MMDELK
Sbjct: 147 QLQVLGDRLDIPVFSMGDKNSPVDISKAGISKAESNGNDVVIIDTAGRLHIDEEMMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E+LLVVDAMTGQ+A + F+ +GI G ILTKLDGD+RGGAALS+K V+
Sbjct: 207 SIKSNVRPHEILLVVDAMTGQDAVNVAENFSESLGIDGIILTKLDGDARGGAALSIKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GE+++ LE F+PDRM+ RILGMGDVLS +EKA+ + + AEE++KKI
Sbjct: 267 GKPIKFVGMGEKLDALESFHPDRMSSRILGMGDVLSLIEKAEASIDAKKAEELEKKIRQN 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F DFL+Q + V MG + +++GMIPG+ G++ QV EK L +EA+I +MT EE
Sbjct: 327 EFSLEDFLEQLQQVRNMGPLDQILGMIPGVSGQLKNLQV--DEKQLDRIEAIINSMTIEE 384
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 351
R+ PE++ S RR+R+A+ SG Q V++L+ Q Q + MK L G+ + G
Sbjct: 385 RKNPEIINGS--RRRRIARGSGTKIQDVNRLLKQFKQTKKMMKQLNGMQKSG 434
>gi|418005311|ref|ZP_12645306.1| signal recognition particle, subunit Ffh [Lactobacillus casei UW1]
gi|410547240|gb|EKQ21477.1| signal recognition particle, subunit Ffh [Lactobacillus casei UW1]
Length = 478
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 175/361 (48%), Positives = 248/361 (68%), Gaps = 8/361 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG L A PTVI++AGLQG GKTT KL+ YL + +L+A DVYRPAAI
Sbjct: 87 MGEAAVPLNKAPHIPTVIMMAGLQGAGKTTTVGKLSKYLMDNDSARPLLIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ VPV+ GT+V P +I +QGL AK+ D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLQTIGKQLNVPVFEMGTDVDPVEIVRQGLATAKENKNDYVLIDTAGRLQIDEKLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K++K + +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KNIKELAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A EM +KI
Sbjct: 267 TGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKNYDEKQAMEMAEKIRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
+FDFNDFL Q +++MG + ++ MIPGM A V+ K + M+A++ +MTP+
Sbjct: 327 NSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVYSMTPQ 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSN 358
ERE P+LL +P RR+R+A SG+ +V++++ Q Q K +M M G++ L
Sbjct: 387 EREDPDLL--NPSRRRRLAAGSGRPVVEVNRMIKQFNQ----SKQMMNQMSKGNMKGLDG 440
Query: 359 L 359
L
Sbjct: 441 L 441
>gi|73662841|ref|YP_301622.1| signal recognition particle [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72495356|dbj|BAE18677.1| signal recognition particle [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 455
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 166/346 (47%), Positives = 249/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S + A PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI
Sbjct: 87 MGGENSTITMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ +PVY+ G +VKP QI + ++ AK++++D VI+DTAGRL +D+A+M EL
Sbjct: 147 DQLQTVGKQIDIPVYSEGDQVKPQQIVENAIKHAKEEHLDFVIIDTAGRLHVDEALMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + P E++LVVDAMTGQ+A + +F+ ++ ++G LTKLDGD+RGGAALS++ V
Sbjct: 207 SDVKEITKPDEIMLVVDAMTGQDAVNVAQSFDEQLEVSGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LEPF+P+RMA RILGMGDVLS +EKAQ+ + ++ A++++KK+ +
Sbjct: 267 TQKPIKFVGMSEKLDGLEPFHPERMASRILGMGDVLSLIEKAQQDVDEDKAKDLEKKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ EK + ++A+I++MTP
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGIDKLNMNEKQIDHIKAIIQSMTPS 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERNDPDTLNVS--RKKRIAKGSGRSVQEVNRLMKQFNDMKKMMKQF 430
>gi|261367302|ref|ZP_05980185.1| signal recognition particle protein [Subdoligranulum variabile DSM
15176]
gi|282570905|gb|EFB76440.1| signal recognition particle protein [Subdoligranulum variabile DSM
15176]
Length = 451
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 180/345 (52%), Positives = 239/345 (69%), Gaps = 6/345 (1%)
Query: 1 MGGEVSELVFAKSR-PTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAI 59
MGG+ + + K++ TV+++ GLQG GKTT +AKL Y + QG+ +LVA DVYRPAAI
Sbjct: 87 MGGDEPQYLHIKNKGQTVLMMCGLQGNGKTTHAAKLGKYYRSQGRRPLLVACDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL I+GEQ GVPV+T GTE KP IA+Q + A+ D+VI+DTAGRLQID A+MDEL
Sbjct: 147 QQLQIVGEQAGVPVFTMGTE-KPEHIAQQAMAHARDHGNDIVILDTAGRLQIDDALMDEL 205
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K + E LLVVDAM GQEA + TFN +IGITG +LTK DGD+RGGAALSV V
Sbjct: 206 VRIKEAVEVDETLLVVDAMAGQEAVNVAKTFNEKIGITGVVLTKTDGDTRGGAALSVLAV 265
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPI G GE++EDLEPFYP RMA RILGMGDVLS +EKAQ V ++AE +++M
Sbjct: 266 TGKPIYFQGTGEKLEDLEPFYPSRMASRILGMGDVLSLIEKAQSVQNDKEAEAAARRMME 325
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FD ND L Q + V +MG S ++ M+PG +I + +K L +EA+I +MTP E
Sbjct: 326 NKFDMNDLLAQFQQVKKMGGASALLAMMPGGNQIDADALD--DKMLPRIEAIIYSMTPAE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
R KPE++ +P R++R+A SG+T + V++L+ Q M+ MK +
Sbjct: 384 RAKPEII--NPKRKRRIAAGSGQTVEAVNKLLRQYEMMQKMMKKV 426
>gi|423395854|ref|ZP_17373055.1| signal recognition particle protein [Bacillus cereus BAG2X1-1]
gi|423406730|ref|ZP_17383879.1| signal recognition particle protein [Bacillus cereus BAG2X1-3]
gi|401653596|gb|EJS71140.1| signal recognition particle protein [Bacillus cereus BAG2X1-1]
gi|401660020|gb|EJS77503.1| signal recognition particle protein [Bacillus cereus BAG2X1-3]
Length = 449
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 172/351 (49%), Positives = 250/351 (71%), Gaps = 8/351 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI
Sbjct: 87 MGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK + P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V
Sbjct: 207 AKVKEIAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMT 296
+F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT
Sbjct: 327 LSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMT 384
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 385 KLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|374376095|ref|ZP_09633753.1| signal recognition particle protein [Niabella soli DSM 19437]
gi|373232935|gb|EHP52730.1| signal recognition particle protein [Niabella soli DSM 19437]
Length = 446
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 179/347 (51%), Positives = 240/347 (69%), Gaps = 9/347 (2%)
Query: 1 MGGEVSELVF-AKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAA 58
MGGE E VF AK P VIL+AGLQG GKTT S KLANYLK K+G S +LVA D+YRPAA
Sbjct: 86 MGGE--EAVFNAKGNPAVILIAGLQGSGKTTFSGKLANYLKSKKGLSPLLVAADIYRPAA 143
Query: 59 IDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDE 118
++QL +LGEQ+GV VY IAK + E+K +N +V+I+DTAGRL +D+ MM E
Sbjct: 144 MEQLRVLGEQIGVEVYIEPENKDAVSIAKNAIAESKSRNKNVIIIDTAGRLAVDEQMMTE 203
Query: 119 LKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKE 178
+ D+K +NP E+L VVD+MTGQ+A FN + +G +LTKLDGD+RGGAALS+K
Sbjct: 204 VADIKNAVNPQEILFVVDSMTGQDAVNTAKAFNERLDFSGVVLTKLDGDTRGGAALSIKY 263
Query: 179 VSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIM 238
KPIK V GE+M+ L+ FYP+RMA RILGMGD+ + VE+AQ+ +E A++++ KI
Sbjct: 264 TVNKPIKFVSNGEKMDALDVFYPERMAQRILGMGDITTLVERAQQQFDEEQAKKLESKIR 323
Query: 239 SANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIEAMTP 297
FDF DF Q + +MG+M ++GMIPG+G KI + +++S K +EAMI++MTP
Sbjct: 324 KNKFDFADFKAQLDQIKKMGNMKDLLGMIPGVGAKIKDLDI--SDESFKGIEAMIDSMTP 381
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
EER P+++ S RRKR+A SGK +V+ + Q QMR MKN+
Sbjct: 382 EERSNPDIINGS--RRKRIATGSGKDIAEVNAFMKQFEQMRDMMKNM 426
>gi|418962676|ref|ZP_13514530.1| signal recognition particle protein [Streptococcus anginosus subsp.
whileyi CCUG 39159]
gi|383345211|gb|EID23344.1| signal recognition particle protein [Streptococcus anginosus subsp.
whileyi CCUG 39159]
Length = 516
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 174/355 (49%), Positives = 246/355 (69%), Gaps = 13/355 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ G +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEGARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV++ GTEV +I QGLE+AK + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFSLGTEVPAVEIVHQGLEQAKANHNDYVLIDTAGRLQIDERLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDVKTLAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKTLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAM 295
FDFNDF+ Q V MG M ++ MIPGM PA +V E E + K A++ +M
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPAMKNFKVDENEIARK--RAIVSSM 383
Query: 296 TPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
TP ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 384 TPVERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSVMQ---GVMSG 433
>gi|18310695|ref|NP_562629.1| signal recognition particle protein [Clostridium perfringens str.
13]
gi|110800465|ref|YP_696400.1| signal recognition particle protein [Clostridium perfringens ATCC
13124]
gi|110802935|ref|YP_699000.1| signal recognition particle protein [Clostridium perfringens SM101]
gi|168207936|ref|ZP_02633941.1| signal recognition particle protein [Clostridium perfringens E str.
JGS1987]
gi|168210654|ref|ZP_02636279.1| signal recognition particle protein [Clostridium perfringens B str.
ATCC 3626]
gi|168214190|ref|ZP_02639815.1| signal recognition particle protein [Clostridium perfringens CPE
str. F4969]
gi|182625861|ref|ZP_02953627.1| signal recognition particle protein [Clostridium perfringens D str.
JGS1721]
gi|422874634|ref|ZP_16921119.1| signal recognition particle protein [Clostridium perfringens F262]
gi|18145376|dbj|BAB81419.1| signal recognition particle protein [Clostridium perfringens str.
13]
gi|110675112|gb|ABG84099.1| signal recognition particle protein [Clostridium perfringens ATCC
13124]
gi|110683436|gb|ABG86806.1| signal recognition particle protein [Clostridium perfringens SM101]
gi|170660749|gb|EDT13432.1| signal recognition particle protein [Clostridium perfringens E str.
JGS1987]
gi|170711297|gb|EDT23479.1| signal recognition particle protein [Clostridium perfringens B str.
ATCC 3626]
gi|170714291|gb|EDT26473.1| signal recognition particle protein [Clostridium perfringens CPE
str. F4969]
gi|177908895|gb|EDT71387.1| signal recognition particle protein [Clostridium perfringens D str.
JGS1721]
gi|380304275|gb|EIA16564.1| signal recognition particle protein [Clostridium perfringens F262]
Length = 452
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 162/333 (48%), Positives = 248/333 (74%), Gaps = 2/333 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S+L ++ + PTV +L GLQG GKTT++ KLA +L+K+ K +LVA D+YRPAAI
Sbjct: 87 MGETESKLKYSDNGPTVFMLVGLQGAGKTTMAGKLALHLRKKNKKPLLVACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G+Q+ +PV++ G +VK IAK +E AK +VVI+DTAGRL ID+ +M ELK
Sbjct: 147 QLQVVGKQIDIPVFSMGDKVKAVDIAKAAIEHAKDNGNNVVIIDTAGRLHIDEDLMQELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
DVK V NP+E+LLVVDAMTGQ+A + TFN + ++G ILTKLDGD+RGGAALS+++++
Sbjct: 207 DVKEVSNPSEILLVVDAMTGQDAVNVAETFNNSLDLSGIILTKLDGDTRGGAALSIRDIT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GE+M D+E F+PDRMA RILGMGDVLS +EKAQ+ + Q++A ++ +K+++
Sbjct: 267 GKPIKFVGVGEKMSDIEVFHPDRMASRILGMGDVLSLIEKAQQAIDQDEASKLSEKMLNQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPE 298
F+F+D+L + ++G ++++I MIPG+ ++ + EK + ++A+I++MT +
Sbjct: 327 EFNFDDYLSAMDQMKKLGPINKLIEMIPGVNTKELEGIDFSQGEKQMATVKAIIQSMTAK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 331
ER++P L+ + R++R+A+ SG T Q+V++++
Sbjct: 387 ERKQPSLVIGNGSRKRRIAKGSGTTVQEVNKVL 419
>gi|146297160|ref|YP_001180931.1| signal recognition particle protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410736|gb|ABP67740.1| signal recognition particle protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 443
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 171/344 (49%), Positives = 236/344 (68%), Gaps = 2/344 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG ++L F+ S ++ ++ GLQG GKTT + KLA LKKQGK +L+A D+YRPAAI
Sbjct: 86 LGGNDTKLTFSPSGFSIYMMVGLQGSGKTTTAGKLAALLKKQGKKPLLIACDIYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++ E+VGV Y + +IA +G+ AK D+ IVDTAGRL I++ +M+EL
Sbjct: 146 QLEVVAEKVGVSCYADYDKKDAVKIAVEGVNFAKSNRFDIAIVDTAGRLHINEELMNELV 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + PTE+LLV+DAMTGQ+A + FN ++GI G I+TKLDGD+RGGAALSVK ++
Sbjct: 206 AIKSAIKPTEILLVLDAMTGQDAVNVAEAFNNQLGIDGIIMTKLDGDTRGGAALSVKAIT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK G GE+MEDLE FYPDRMA RILGMGD+L+ +EKAQE + Q+ AEE++KK+ S
Sbjct: 266 GKPIKFAGMGEKMEDLEVFYPDRMASRILGMGDILTLIEKAQEAIDQKKAEELEKKLRSM 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F DFL Q + + +MG +S++I MIPG+ EK LK +EA+I +MT EER
Sbjct: 326 QFTLEDFLDQLKQIKKMGPLSQIISMIPGIKLKGDVDFDAGEKELKKIEAIINSMTKEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+ P ++ S R++R+A SG T Q V++L+ Q M+ MK
Sbjct: 386 QDPSIINSS--RKRRIAMGSGTTVQDVNRLLKQFEDMKRMMKQF 427
>gi|402298804|ref|ZP_10818465.1| signal recognition particle protein [Bacillus alcalophilus ATCC
27647]
gi|401726012|gb|EJS99267.1| signal recognition particle protein [Bacillus alcalophilus ATCC
27647]
Length = 452
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 166/346 (47%), Positives = 250/346 (72%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ PTV+++ GLQG GKTT +AKLAN+L KK ++ MLVA D+YRPAAI
Sbjct: 87 MGGEQSKIAVNNKPPTVVMMVGLQGAGKTTTTAKLANHLRKKHNRNPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK+++ D V++DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLSMPVFSLGDQVSPVEIAKQAIAKAKEEHHDYVLIDTAGRLHIDEKLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ VK + P E+LLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAA+SVK V
Sbjct: 207 QQVKEIAKPDEILLVVDAMTGQDAVNVAESFNEQLDVTGVVLTKLDGDTRGGAAISVKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A E++KK+ +
Sbjct: 267 TNTPIKFAGMGEKIDQLEPFHPERMASRILGMGDVLTLIEKAQMNVDEEKARELEKKMKN 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+ F+DFL Q V MG + ++ M+PGM K+ + ++ +K + +EA++ +MTP
Sbjct: 327 MDITFDDFLDQLDQVRNMGPLDELLNMMPGMNKMKGMKDLKVDDKQIGHVEAIVRSMTPM 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E++ P ++ S R++R+A+ SG + Q+V++L+ Q +M+ MK +
Sbjct: 387 EKQDPSIMNAS--RKRRIAKGSGTSIQEVNRLLKQFDEMKKMMKQM 430
>gi|387784255|ref|YP_006070338.1| signal recognition particle subunit FFH/SRP54 (Srp54)
[Streptococcus salivarius JIM8777]
gi|338745137|emb|CCB95503.1| signal recognition particle subunit FFH/SRP54 (Srp54)
[Streptococcus salivarius JIM8777]
Length = 520
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 241/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E SE+ + PT+I++ GLQG GKTT + KLAN L K+Q M++A D+YRPAAI
Sbjct: 87 LGSETSEIEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEQEARPMMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE+ +I K GLE+A+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTEIPAVEIVKNGLEQARANKNDYVLIDTAGRLQIDETLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
D+K +P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E+
Sbjct: 207 HDIKDFAHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAALSIREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ M+PGM P A V+ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NPALANVKVDEKQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|358051766|ref|ZP_09145874.1| signal recognition particle protein [Staphylococcus simiae CCM
7213]
gi|357258737|gb|EHJ08686.1| signal recognition particle protein [Staphylococcus simiae CCM
7213]
Length = 455
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 168/346 (48%), Positives = 248/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + A PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI
Sbjct: 87 MGGENTSITMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 DQLQTVGKQIDIPVYSEGDQVKPQQIVTNALQHAKEEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++VK + P E++LVVDAMTGQ+A + +F+ ++ ITG LTKLDGD+RGGAALS++ V
Sbjct: 207 QEVKEIAQPNEIMLVVDAMTGQDAVNVAESFDNQLDITGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ +K + ++A+I++MT E
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMNDKQIDHIKAIIQSMTKE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERHNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|315613041|ref|ZP_07887952.1| signal recognition particle protein [Streptococcus sanguinis ATCC
49296]
gi|315315151|gb|EFU63192.1| signal recognition particle protein [Streptococcus sanguinis ATCC
49296]
Length = 523
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 170/353 (48%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GT+V +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTKVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|29376252|ref|NP_815406.1| signal recognition particle protein [Enterococcus faecalis V583]
gi|227518889|ref|ZP_03948938.1| signal recognition particle protein [Enterococcus faecalis TX0104]
gi|256762629|ref|ZP_05503209.1| signal recognition particle protein [Enterococcus faecalis T3]
gi|256961798|ref|ZP_05565969.1| signal recognition particle protein [Enterococcus faecalis Merz96]
gi|256964995|ref|ZP_05569166.1| signal recognition particle protein [Enterococcus faecalis
HIP11704]
gi|257419425|ref|ZP_05596419.1| signal recognition particle protein [Enterococcus faecalis T11]
gi|293382861|ref|ZP_06628779.1| signal recognition particle protein [Enterococcus faecalis R712]
gi|293389652|ref|ZP_06634107.1| signal recognition particle protein [Enterococcus faecalis S613]
gi|307273091|ref|ZP_07554337.1| signal recognition particle protein [Enterococcus faecalis TX0855]
gi|312907668|ref|ZP_07766659.1| signal recognition particle protein [Enterococcus faecalis DAPTO
512]
gi|312910285|ref|ZP_07769132.1| signal recognition particle protein [Enterococcus faecalis DAPTO
516]
gi|384513375|ref|YP_005708468.1| signal recognition particle protein [Enterococcus faecalis OG1RF]
gi|422714488|ref|ZP_16771214.1| signal recognition particle protein [Enterococcus faecalis TX0309A]
gi|422715746|ref|ZP_16772462.1| signal recognition particle protein [Enterococcus faecalis TX0309B]
gi|424676631|ref|ZP_18113502.1| signal recognition particle protein [Enterococcus faecalis ERV103]
gi|424681553|ref|ZP_18118340.1| signal recognition particle protein [Enterococcus faecalis ERV116]
gi|424683743|ref|ZP_18120493.1| signal recognition particle protein [Enterococcus faecalis ERV129]
gi|424686353|ref|ZP_18123021.1| signal recognition particle protein [Enterococcus faecalis ERV25]
gi|424690375|ref|ZP_18126910.1| signal recognition particle protein [Enterococcus faecalis ERV31]
gi|424695468|ref|ZP_18131851.1| signal recognition particle protein [Enterococcus faecalis ERV37]
gi|424696793|ref|ZP_18133134.1| signal recognition particle protein [Enterococcus faecalis ERV41]
gi|424699821|ref|ZP_18136032.1| signal recognition particle protein [Enterococcus faecalis ERV62]
gi|424703166|ref|ZP_18139300.1| signal recognition particle protein [Enterococcus faecalis ERV63]
gi|424707337|ref|ZP_18143321.1| signal recognition particle protein [Enterococcus faecalis ERV65]
gi|424717003|ref|ZP_18146301.1| signal recognition particle protein [Enterococcus faecalis ERV68]
gi|424720581|ref|ZP_18149682.1| signal recognition particle protein [Enterococcus faecalis ERV72]
gi|424724129|ref|ZP_18153078.1| signal recognition particle protein [Enterococcus faecalis ERV73]
gi|424733720|ref|ZP_18162275.1| signal recognition particle protein [Enterococcus faecalis ERV81]
gi|424743981|ref|ZP_18172286.1| signal recognition particle protein [Enterococcus faecalis ERV85]
gi|424750511|ref|ZP_18178575.1| signal recognition particle protein [Enterococcus faecalis ERV93]
gi|430360637|ref|ZP_19426358.1| signal recognition particle protein [Enterococcus faecalis OG1X]
gi|430370543|ref|ZP_19429068.1| signal recognition particle protein [Enterococcus faecalis M7]
gi|29343715|gb|AAO81476.1| signal recognition particle protein [Enterococcus faecalis V583]
gi|227073680|gb|EEI11643.1| signal recognition particle protein [Enterococcus faecalis TX0104]
gi|256683880|gb|EEU23575.1| signal recognition particle protein [Enterococcus faecalis T3]
gi|256952294|gb|EEU68926.1| signal recognition particle protein [Enterococcus faecalis Merz96]
gi|256955491|gb|EEU72123.1| signal recognition particle protein [Enterococcus faecalis
HIP11704]
gi|257161253|gb|EEU91213.1| signal recognition particle protein [Enterococcus faecalis T11]
gi|291079526|gb|EFE16890.1| signal recognition particle protein [Enterococcus faecalis R712]
gi|291081045|gb|EFE18008.1| signal recognition particle protein [Enterococcus faecalis S613]
gi|306510076|gb|EFM79100.1| signal recognition particle protein [Enterococcus faecalis TX0855]
gi|310626696|gb|EFQ09979.1| signal recognition particle protein [Enterococcus faecalis DAPTO
512]
gi|311289558|gb|EFQ68114.1| signal recognition particle protein [Enterococcus faecalis DAPTO
516]
gi|315576091|gb|EFU88282.1| signal recognition particle protein [Enterococcus faecalis TX0309B]
gi|315580665|gb|EFU92856.1| signal recognition particle protein [Enterococcus faecalis TX0309A]
gi|327535264|gb|AEA94098.1| signal recognition particle protein [Enterococcus faecalis OG1RF]
gi|402351260|gb|EJU86152.1| signal recognition particle protein [Enterococcus faecalis ERV116]
gi|402356251|gb|EJU90985.1| signal recognition particle protein [Enterococcus faecalis ERV103]
gi|402364502|gb|EJU98938.1| signal recognition particle protein [Enterococcus faecalis ERV31]
gi|402364741|gb|EJU99176.1| signal recognition particle protein [Enterococcus faecalis ERV129]
gi|402367207|gb|EJV01548.1| signal recognition particle protein [Enterococcus faecalis ERV25]
gi|402368406|gb|EJV02722.1| signal recognition particle protein [Enterococcus faecalis ERV37]
gi|402375750|gb|EJV09730.1| signal recognition particle protein [Enterococcus faecalis ERV62]
gi|402377122|gb|EJV11033.1| signal recognition particle protein [Enterococcus faecalis ERV41]
gi|402384935|gb|EJV18476.1| signal recognition particle protein [Enterococcus faecalis ERV65]
gi|402385171|gb|EJV18711.1| signal recognition particle protein [Enterococcus faecalis ERV63]
gi|402386351|gb|EJV19857.1| signal recognition particle protein [Enterococcus faecalis ERV68]
gi|402391050|gb|EJV24366.1| signal recognition particle protein [Enterococcus faecalis ERV81]
gi|402393052|gb|EJV26282.1| signal recognition particle protein [Enterococcus faecalis ERV72]
gi|402395863|gb|EJV28944.1| signal recognition particle protein [Enterococcus faecalis ERV73]
gi|402399657|gb|EJV32523.1| signal recognition particle protein [Enterococcus faecalis ERV85]
gi|402406489|gb|EJV39039.1| signal recognition particle protein [Enterococcus faecalis ERV93]
gi|429512752|gb|ELA02349.1| signal recognition particle protein [Enterococcus faecalis OG1X]
gi|429515307|gb|ELA04823.1| signal recognition particle protein [Enterococcus faecalis M7]
Length = 472
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 170/346 (49%), Positives = 246/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E EL + PTVI++ GLQG GKTT + KLA +L K + +L+AGDVYRPAAI
Sbjct: 87 LGSETVELNKSPKIPTVIMMTGLQGAGKTTFTGKLAKHLMKTENARPLLIAGDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +LG+Q+ VPV+ GT+ P +I +QGL AK+K D V++DTAGRL ID+A+MDEL
Sbjct: 147 DQLKVLGQQLEVPVFDMGTDANPVEIVRQGLALAKEKKNDYVLIDTAGRLHIDEALMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K + +P E+LLVVDAMTGQ+A + +FN ++GITG ++TK+DGD+RGGAALS++ V
Sbjct: 207 KQIKELADPNEILLVVDAMTGQDAVNVADSFNEQLGITGVVITKMDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PIK VG GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+ +K+
Sbjct: 267 TGAPIKFVGSGEKLTDLEIFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELAQKMKE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+FDFNDF++Q V MG + ++ MIPGM + + V+ K + AM+ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVMGMGPIEDLLKMIPGMSNMPGIENVKVDPKDVARKRAMVLSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ERE P+LL +P RR+R+A SG + +V++++ Q + + M+ +
Sbjct: 387 ERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESKKMMQQM 430
>gi|169342711|ref|ZP_02863752.1| signal recognition particle protein [Clostridium perfringens C str.
JGS1495]
gi|169299217|gb|EDS81287.1| signal recognition particle protein [Clostridium perfringens C str.
JGS1495]
Length = 452
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 162/333 (48%), Positives = 248/333 (74%), Gaps = 2/333 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S+L ++ + PTV +L GLQG GKTT++ KLA +L+K+ K +LVA D+YRPAAI
Sbjct: 87 MGETESKLKYSDNGPTVFMLVGLQGAGKTTMAGKLALHLRKKNKKPLLVACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G+Q+ +PV++ G +VK IAK +E AK +VVI+DTAGRL ID+ +M ELK
Sbjct: 147 QLQVVGKQIDIPVFSMGDKVKAVDIAKAAIEHAKDNGNNVVIIDTAGRLHIDEDLMQELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
DVK V NP+E+LLVVDAMTGQ+A + TFN + ++G ILTKLDGD+RGGAALS+++++
Sbjct: 207 DVKEVSNPSEILLVVDAMTGQDAVNVAETFNNSLDLSGIILTKLDGDTRGGAALSIRDIT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GE+M D+E F+PDRMA RILGMGDVLS +EKAQ+ + Q++A ++ +K+++
Sbjct: 267 GKPIKFVGVGEKMSDIEVFHPDRMASRILGMGDVLSLIEKAQQAIDQDEASKLSEKMLNQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPE 298
F+F+D+L + ++G ++++I MIPG+ ++ + EK + ++A+I++MT +
Sbjct: 327 EFNFDDYLSAMDQMKKLGPINKLIEMIPGVNTKELEGIDFSQGEKQMATVKAIIQSMTAK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 331
ER++P L+ + R++R+A+ SG T Q+V++++
Sbjct: 387 ERKQPSLVIGNGSRKRRIAKGSGTTVQEVNKVL 419
>gi|419784925|ref|ZP_14310683.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-M]
gi|383363526|gb|EID40858.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-M]
Length = 447
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 169/358 (47%), Positives = 255/358 (71%), Gaps = 4/358 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI
Sbjct: 87 MGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 NQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K+VK + P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V
Sbjct: 207 KEVKEIAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 356
ER P+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK G +G + A+
Sbjct: 387 ERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQFTGGGKGKKVNAI 442
>gi|422865505|ref|ZP_16912130.1| signal recognition particle protein [Streptococcus sanguinis
SK1058]
gi|327489572|gb|EGF21364.1| signal recognition particle protein [Streptococcus sanguinis
SK1058]
Length = 524
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 245/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ K+ +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEKARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 SDVKALANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M +I M+PGM PA + E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQGMGPMEDLIKMLPGMAN-NPALKNFKVDEREIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 386 EERENPDLL--TPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|157150208|ref|YP_001450412.1| signal recognition particle protein [Streptococcus gordonii str.
Challis substr. CH1]
gi|157075002|gb|ABV09685.1| signal recognition particle protein [Streptococcus gordonii str.
Challis substr. CH1]
Length = 524
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 177/386 (45%), Positives = 255/386 (66%), Gaps = 26/386 (6%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKTNHNDYVLIDTAGRLQIDEKLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 SDVKALANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M +I M+PGM PA + EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQGMGPMEDLIKMLPGMAS-NPALKNFKVDEKEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM-GVME------- 349
EERE P+LL +P RR+R+A SG + V++ + Q + M+ ++ G M
Sbjct: 386 EERENPDLL--TPSRRRRIANGSGNSFVDVNKFIKDFNQSKQLMQGVLSGDMSKMMKQMG 443
Query: 350 ------------GGSLPALSNLEDAL 363
GG++P +S L+D +
Sbjct: 444 LNPNNMPKNMPGGGAMPDMSALQDMM 469
>gi|227553504|ref|ZP_03983553.1| signal recognition particle protein [Enterococcus faecalis HH22]
gi|227177374|gb|EEI58346.1| signal recognition particle protein [Enterococcus faecalis HH22]
Length = 442
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/346 (49%), Positives = 246/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E EL + PTVI++ GLQG GKTT + KLA +L K + +L+AGDVYRPAAI
Sbjct: 57 LGSETVELNKSPKIPTVIMMTGLQGAGKTTFTGKLAKHLMKTENARPLLIAGDVYRPAAI 116
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +LG+Q+ VPV+ GT+ P +I +QGL AK+K D V++DTAGRL ID+A+MDEL
Sbjct: 117 DQLKVLGQQLEVPVFDMGTDANPVEIVRQGLALAKEKKNDYVLIDTAGRLHIDEALMDEL 176
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K + +P E+LLVVDAMTGQ+A + +FN ++GITG ++TK+DGD+RGGAALS++ V
Sbjct: 177 KQIKELADPNEILLVVDAMTGQDAVNVADSFNEQLGITGVVITKMDGDTRGGAALSIRAV 236
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PIK VG GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+ +K+
Sbjct: 237 TGAPIKFVGSGEKLTDLEIFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELAQKMKE 296
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+FDFNDF++Q V MG + ++ MIPGM + + V+ K + AM+ +MTP
Sbjct: 297 NSFDFNDFIEQLDQVMGMGPIEDLLKMIPGMSNMPGIENVKVDPKDVARKRAMVLSMTPA 356
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ERE P+LL +P RR+R+A SG + +V++++ Q + + M+ +
Sbjct: 357 ERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESKKMMQQM 400
>gi|228992573|ref|ZP_04152500.1| Signal recognition particle protein [Bacillus pseudomycoides DSM
12442]
gi|228998621|ref|ZP_04158208.1| Signal recognition particle protein [Bacillus mycoides Rock3-17]
gi|229006121|ref|ZP_04163809.1| Signal recognition particle protein [Bacillus mycoides Rock1-4]
gi|228755197|gb|EEM04554.1| Signal recognition particle protein [Bacillus mycoides Rock1-4]
gi|228761089|gb|EEM10048.1| Signal recognition particle protein [Bacillus mycoides Rock3-17]
gi|228767207|gb|EEM15843.1| Signal recognition particle protein [Bacillus pseudomycoides DSM
12442]
Length = 449
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/351 (49%), Positives = 249/351 (70%), Gaps = 8/351 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI
Sbjct: 87 MGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V
Sbjct: 207 AKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMT 296
+F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT
Sbjct: 327 LSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMT 384
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
ERE PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 385 KVEREHPEIINAS--RKKRIAKGSGTTVQEINRLLKQFEDMKKMMKTMTGM 433
>gi|335030020|ref|ZP_08523519.1| signal recognition particle protein [Streptococcus infantis SK1076]
gi|334267482|gb|EGL85942.1| signal recognition particle protein [Streptococcus infantis SK1076]
Length = 521
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 245/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLA+ LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLAHKLKKEEDARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVIDAMIGQEAANVAREFNDQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRMA RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMASRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ EK + A++ +MT
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDEKQIARKRAIVSSMTS 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIAAGSGNTFIEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|322373056|ref|ZP_08047592.1| signal recognition particle protein [Streptococcus sp. C150]
gi|321278098|gb|EFX55167.1| signal recognition particle protein [Streptococcus sp. C150]
Length = 520
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 242/353 (68%), Gaps = 7/353 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E SE+ + PT+I++ GLQG GKTT + KLAN L K+Q M++A D+YRPAAI
Sbjct: 87 LGSETSEIEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEQEARPMMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I K GLE+A+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTETPAVEIVKNGLEQARANKNDYVLIDTAGRLQIDETLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
D+K +P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E+
Sbjct: 207 HDIKNFAHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAALSIREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ M+PGM P A V+ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NPALANVKVDEKQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM-GVME 349
EERE P+LL +P RR+R+A SG T +V++ + Q + M+++M G ME
Sbjct: 386 EERENPDLL--TPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQSVMSGDME 436
>gi|336324196|ref|YP_004604163.1| signal recognition particle protein [Flexistipes sinusarabici DSM
4947]
gi|336107777|gb|AEI15595.1| signal recognition particle protein [Flexistipes sinusarabici DSM
4947]
Length = 449
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 166/341 (48%), Positives = 241/341 (70%), Gaps = 7/341 (2%)
Query: 1 MGGE---VSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPA 57
+GGE S++ + + PT+I+L GLQG GKTT + KLA + +K K ++VA D+YRPA
Sbjct: 86 LGGEDPSASKITLSSTPPTIIMLVGLQGSGKTTTAGKLAKHFQKNDKRVLMVADDIYRPA 145
Query: 58 AIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMD 117
AIDQL +LG+Q+GV VY+ IA++ E AKK D+VI+DTAGRL ++ +MD
Sbjct: 146 AIDQLEVLGKQLGVDVYSDKDNKNAVDIAQKSYEYAKKSAKDIVIIDTAGRLHVNNELMD 205
Query: 118 ELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVK 177
EL ++K+ ++P E+L V DAMTGQ+A + T FN ++ I+G ILTKLDGD+RGGAALS++
Sbjct: 206 ELFNIKKAVSPDEILFVADAMTGQDAVNVATKFNNDLDISGVILTKLDGDARGGAALSIR 265
Query: 178 EVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKI 237
EV+GKP+K VG GE+++ EPFYPDRMA RILGMGDV+S VE AQ+ +++++AE++ K+
Sbjct: 266 EVTGKPLKYVGVGEKLDAFEPFYPDRMASRILGMGDVVSLVEMAQDAIEEDEAEKLADKV 325
Query: 238 MSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTP 297
DFND L Q + + +MGS ++ ++PGMG + A V E + +K +EA+I +MTP
Sbjct: 326 SKGGMDFNDMLSQFKMIRKMGSFESIMKLMPGMGNMKKADVDEDQ--IKKIEAIINSMTP 383
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 338
ER +LL S R+KR+A+ SG + V++L++QL QM
Sbjct: 384 RERRYYKLLNGS--RKKRIARGSGTSVSDVNKLISQLQQMN 422
>gi|346226274|ref|ZP_08847416.1| signal recognition particle protein [Anaerophaga thermohalophila
DSM 12881]
Length = 443
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 178/341 (52%), Positives = 236/341 (69%), Gaps = 4/341 (1%)
Query: 3 GEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQ 61
G S + K P VIL+AGLQG GKTT S KLA +K K+GK ML+AGDVYRPAAI+Q
Sbjct: 87 GSSSTDINLKGNPAVILVAGLQGSGKTTFSGKLAYLIKNKRGKHPMLIAGDVYRPAAINQ 146
Query: 62 LVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKD 121
L +LG Q+ VPVYT P +IAK G++EAK K DVVI+DTAGRL ID+ MMDE+
Sbjct: 147 LQVLGGQISVPVYTEEGNTDPVKIAKAGIKEAKAKGHDVVIIDTAGRLAIDEQMMDEIAA 206
Query: 122 VKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSG 181
+K + P E L VVDAMTGQ+A FN + G +LTKLDGD+RGGAA+S++ V
Sbjct: 207 IKDAVKPHETLFVVDAMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAISIRSVVD 266
Query: 182 KPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSAN 241
KPIK VG GE+M+ L+ F+P RMA RILGMGD++S VEKAQE E+A+++QKKI
Sbjct: 267 KPIKFVGMGEKMDALDVFHPSRMADRILGMGDIVSLVEKAQEQYDAEEAKKLQKKIAKNQ 326
Query: 242 FDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEERE 301
F+F+DF+ Q R + +MG++ + GMIPGMGK+ V + + K +EA+I +MTPEER+
Sbjct: 327 FNFDDFIGQIRQIKKMGNLKDLAGMIPGMGKMLK-NVDIDDDAFKGVEAIISSMTPEERQ 385
Query: 302 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
+P ++ S RRKR+A SG + Q+V++L+ Q R M+
Sbjct: 386 QPSIINGS--RRKRIAAGSGTSIQEVNRLMKQFEDTRKAMR 424
>gi|229025286|ref|ZP_04181706.1| Signal recognition particle protein [Bacillus cereus AH1272]
gi|423389848|ref|ZP_17367074.1| signal recognition particle protein [Bacillus cereus BAG1X1-3]
gi|423418248|ref|ZP_17395337.1| signal recognition particle protein [Bacillus cereus BAG3X2-1]
gi|228736039|gb|EEL86614.1| Signal recognition particle protein [Bacillus cereus AH1272]
gi|401106521|gb|EJQ14482.1| signal recognition particle protein [Bacillus cereus BAG3X2-1]
gi|401641939|gb|EJS59656.1| signal recognition particle protein [Bacillus cereus BAG1X1-3]
Length = 449
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/351 (49%), Positives = 251/351 (71%), Gaps = 8/351 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI
Sbjct: 87 MGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKYNRKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V
Sbjct: 207 AKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMT 296
+F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT
Sbjct: 327 LSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMT 384
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK++ G+
Sbjct: 385 KLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKSMTGM 433
>gi|365118236|ref|ZP_09336957.1| signal recognition particle protein [Tannerella sp. 6_1_58FAA_CT1]
gi|363649905|gb|EHL88998.1| signal recognition particle protein [Tannerella sp. 6_1_58FAA_CT1]
Length = 440
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 178/355 (50%), Positives = 246/355 (69%), Gaps = 5/355 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG+ ++ S P VIL++GLQG GKTT S KLA LK K+GK +LVA DVYRPAAI
Sbjct: 86 MGGDSVDVNITGS-PAVILMSGLQGSGKTTFSGKLAQLLKGKRGKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +LGEQ+G+PVY+ P QIA+ +++A++ D+VIVDTAGRL +D+ MM E+
Sbjct: 145 EQLKVLGEQIGIPVYSEPDCKNPVQIAQNAIKQARQDGQDLVIVDTAGRLAVDEEMMREI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K +NP E+L VVD+MTGQ+A FN + TG +LTKLDGD+RGGAALS++ V
Sbjct: 205 KAIKDAINPNEILFVVDSMTGQDAVNTAKEFNDRLDFTGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+M+ L+ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VNKPIKFVGTGEKMDALDVFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDF+ Q + + +MG++ + MIPG+GK + + + K +EA+I +MTP+E
Sbjct: 325 NQFDFNDFISQIQQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSVEAIIYSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 354
R PELL S RR+R+A+ SG + Q+V++L+ Q Q R MK + G G +P
Sbjct: 384 RSNPELLNGS--RRQRIAKGSGTSIQEVNRLIKQFDQTRKMMKMVAGGKMGKMMP 436
>gi|257086986|ref|ZP_05581347.1| signal recognition particle protein [Enterococcus faecalis D6]
gi|422721959|ref|ZP_16778536.1| signal recognition particle protein [Enterococcus faecalis TX2137]
gi|424673086|ref|ZP_18110029.1| signal recognition particle protein [Enterococcus faecalis 599]
gi|256995016|gb|EEU82318.1| signal recognition particle protein [Enterococcus faecalis D6]
gi|315027856|gb|EFT39788.1| signal recognition particle protein [Enterococcus faecalis TX2137]
gi|402352896|gb|EJU87732.1| signal recognition particle protein [Enterococcus faecalis 599]
Length = 472
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/346 (49%), Positives = 245/346 (70%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E EL + PTVI++ GLQG GKTT + KLA +L K + +L+AGDVYRPAAI
Sbjct: 87 LGSETVELNKSPKIPTVIMMTGLQGAGKTTFTGKLAKHLMKTENARPLLIAGDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +LG+Q+ VPV+ GT+ P +I +QGL AK+K D V++DTAGRL ID+A+MDEL
Sbjct: 147 DQLKVLGQQLEVPVFDMGTDANPVEIVRQGLALAKEKKNDYVLIDTAGRLHIDEALMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K + NP E+LLVVDAMTGQ+A + +FN ++GITG ++TK+DGD+RGGAALS++ V
Sbjct: 207 KQIKELANPNEILLVVDAMTGQDAVNVADSFNEQLGITGVVITKMDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK VG GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+ +K+
Sbjct: 267 TSAPIKFVGSGEKLTDLEIFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELAQKMKE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+FDFNDF++Q V MG + ++ MIPGM + + V+ K + AM+ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVMGMGPIEDLLKMIPGMSNMPGIENVKVDPKDVARKRAMVLSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ERE P+LL +P RR+R+A SG + +V++++ Q + + M+ +
Sbjct: 387 ERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESKKMMQQM 430
>gi|229086398|ref|ZP_04218574.1| Signal recognition particle protein [Bacillus cereus Rock3-44]
gi|228696914|gb|EEL49723.1| Signal recognition particle protein [Bacillus cereus Rock3-44]
Length = 449
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/351 (49%), Positives = 250/351 (71%), Gaps = 8/351 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI
Sbjct: 87 MGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V
Sbjct: 207 AKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMT 296
+F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT
Sbjct: 327 LSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMT 384
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 385 KIEREQPEIINAS--RKKRIAKGSGTTVQEINRLLKQFEDMKKMMKTMTGM 433
>gi|418964864|ref|ZP_13516652.1| signal recognition particle protein [Streptococcus constellatus
subsp. constellatus SK53]
gi|383344265|gb|EID22434.1| signal recognition particle protein [Streptococcus constellatus
subsp. constellatus SK53]
Length = 524
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 174/355 (49%), Positives = 247/355 (69%), Gaps = 13/355 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEAARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV++ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFSLGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDVKVLAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAM 295
FDFNDF+ Q V MGSM ++ MIPGM PA +V E E + K A++ +M
Sbjct: 327 NTFDFNDFIDQLDQVQNMGSMEDLLKMIPGMAN-NPAMKNFKVDENEIARK--RAIVSSM 383
Query: 296 TPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
TP ERE P LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 384 TPAERENPNLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSVMQ---GVMSG 433
>gi|417698687|ref|ZP_12347859.1| signal recognition particle protein [Streptococcus pneumoniae
GA41317]
gi|419493436|ref|ZP_14033162.1| signal recognition particle protein [Streptococcus pneumoniae
GA47210]
gi|419506198|ref|ZP_14045859.1| signal recognition particle protein [Streptococcus pneumoniae
GA49194]
gi|421227494|ref|ZP_15684198.1| signal recognition particle protein [Streptococcus pneumoniae
2072047]
gi|421268335|ref|ZP_15719205.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR95]
gi|332200732|gb|EGJ14804.1| signal recognition particle protein [Streptococcus pneumoniae
GA41317]
gi|379593611|gb|EHZ58423.1| signal recognition particle protein [Streptococcus pneumoniae
GA47210]
gi|379608112|gb|EHZ72858.1| signal recognition particle protein [Streptococcus pneumoniae
GA49194]
gi|395595196|gb|EJG55430.1| signal recognition particle protein [Streptococcus pneumoniae
2072047]
gi|395869830|gb|EJG80944.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR95]
Length = 523
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 245/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MT
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTS 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|148655435|ref|YP_001275640.1| signal recognition particle protein [Roseiflexus sp. RS-1]
gi|148567545|gb|ABQ89690.1| signal recognition particle subunit FFH/SRP54 (srp54) [Roseiflexus
sp. RS-1]
Length = 444
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 176/349 (50%), Positives = 248/349 (71%), Gaps = 7/349 (2%)
Query: 8 LVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGE 67
L A+ PTVI+L GLQG GKTT +AKLA +L+K+GK +LVA D+YRPAAI QL LG
Sbjct: 93 LAEARPGPTVIMLIGLQGSGKTTTAAKLALWLRKKGKRPLLVAADIYRPAAITQLESLGR 152
Query: 68 QVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLN 127
Q+G+PV+ GT+V P +IA+ L A+ +N+ VI+DTAGRLQID+ +M EL+ + ++
Sbjct: 153 QLGIPVHAEGTQVSPPEIARHALRRARDENLTHVIIDTAGRLQIDEPLMAELEQINAAVD 212
Query: 128 PTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLV 187
P E LLVVDAM GQEA + FN +G+TG I TK+DGD+RGGAALSV+ V+G PIK +
Sbjct: 213 PVERLLVVDAMIGQEAVRVAEEFNRRVGLTGVIFTKVDGDARGGAALSVRAVTGVPIKFL 272
Query: 188 GRGERME--DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 245
G GE++E +EPF+PDR+A RILGMGDVLS +E+A+ + +E A +MQKK++ +FDF
Sbjct: 273 GSGEKVEASTIEPFHPDRLASRILGMGDVLSLIERAEAIYDEEQARKMQKKLVKGSFDFE 332
Query: 246 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 305
DFL + + ++G + +++GMIPG+ K+ ++ EK LK +EA+I +MT EER P+L
Sbjct: 333 DFLVSMQQMRKLGPLQQILGMIPGLDKLAREEI-ITEKDLKKIEAIIFSMTKEERRNPDL 391
Query: 306 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 354
+ R++R+A+ SG Q+V+QLV Q QM+ MK + G +GG P
Sbjct: 392 IKGR--RKERIARGSGTQVQEVTQLVNQFRQMQRMMKRMGG--KGGIDP 436
>gi|224024147|ref|ZP_03642513.1| hypothetical protein BACCOPRO_00869 [Bacteroides coprophilus DSM
18228]
gi|224017369|gb|EEF75381.1| hypothetical protein BACCOPRO_00869 [Bacteroides coprophilus DSM
18228]
Length = 443
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 177/347 (51%), Positives = 240/347 (69%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG+ +E+ K+RP VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI
Sbjct: 86 MGGDTAEIEL-KNRPAVILMSGLQGSGKTTFSGKLARMLKMKKNRKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +LG+QV VPVY+ P QIA ++EAK K D+VIVDTAGRL ID+ MM+E+
Sbjct: 145 EQLKVLGQQVEVPVYSEPESKNPVQIALNAIQEAKAKGYDLVIVDTAGRLAIDEQMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K +NP E L VVDAMTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 EAIKNAINPDETLFVVDAMTGQDAVNTAREFNERLDFNGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VNKPIKFVGTGEKLDAVDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + + +MG++ + MIPG+GK + + + K +EA+I +MTP+E
Sbjct: 325 NQFDFNDFLTQIQQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPQE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R PE+L S RR R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 384 RTHPEILNGS--RRTRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|332880672|ref|ZP_08448345.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|357045958|ref|ZP_09107588.1| signal recognition particle protein [Paraprevotella clara YIT
11840]
gi|332681306|gb|EGJ54230.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|355530964|gb|EHH00367.1| signal recognition particle protein [Paraprevotella clara YIT
11840]
Length = 450
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 178/347 (51%), Positives = 238/347 (68%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE +EL + P+VIL+AGL G GKTT+S KLA LK K+ K+ +L A D+YRPAAI
Sbjct: 86 MGGETAELNL-QGHPSVILMAGLNGAGKTTLSGKLALMLKTKKRKNPLLAACDIYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +LGEQ+G+PVY+ QIA+ ++EAK K DVVIVDTAGRL +D+ MM E+
Sbjct: 145 EQLKVLGEQIGIPVYSEPDNKDAVQIAQNAVKEAKAKGYDVVIVDTAGRLAVDEQMMQEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K +NP E L VVDAMTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 AAIKHGINPDETLFVVDAMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+ME ++ F+P RMA RILGMGD++S VEKAQE +E+A +QKKI
Sbjct: 265 VNKPIKFVGTGEKMEAIDQFHPSRMADRILGMGDIVSLVEKAQEQYDEEEARRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDF+ Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP E
Sbjct: 325 NQFDFNDFMSQIQQIKKMGNLKDLASMIPGVGKAL-KDVEIDDNAFKGIEAIIQSMTPRE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 384 RTNPEILNTS--RRQRIAKGSGTNIQEVNRLIKQFDQTRKMMKMVTG 428
>gi|421452536|ref|ZP_15901897.1| signal recognition particle, subunit FFH/SRP54 [Streptococcus
salivarius K12]
gi|400182967|gb|EJO17229.1| signal recognition particle, subunit FFH/SRP54 [Streptococcus
salivarius K12]
Length = 520
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 240/353 (67%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E SE+ + PT+I++ GLQG GKTT + KLAN L K+Q M++A D+YRPAAI
Sbjct: 87 LGSETSEIEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEQEARPMMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I K GLE+A+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTETPAVEIVKNGLEQARANKNDYVLIDTAGRLQIDETLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
D+K +P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E+
Sbjct: 207 HDIKNFAHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAALSIREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ M+PGM P A V+ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NPALANVKVDEKQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|418645795|ref|ZP_13207913.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-55]
gi|375022328|gb|EHS15811.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-55]
Length = 447
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 169/358 (47%), Positives = 255/358 (71%), Gaps = 4/358 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI
Sbjct: 87 MGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 NQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K+VK + P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V
Sbjct: 207 KEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 356
ER P+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK G +G + A+
Sbjct: 387 ERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQFTGGGKGKKVNAI 442
>gi|146318530|ref|YP_001198242.1| Signal recognition particle GTPase [Streptococcus suis 05ZYH33]
gi|146320726|ref|YP_001200437.1| Signal recognition particle GTPase [Streptococcus suis 98HAH33]
gi|253751657|ref|YP_003024798.1| signal recognition particle protein [Streptococcus suis SC84]
gi|253753559|ref|YP_003026700.1| signal recognition particle protein [Streptococcus suis P1/7]
gi|386577837|ref|YP_006074243.1| Signal recognition particle protein [Streptococcus suis GZ1]
gi|386579891|ref|YP_006076296.1| Signal recognition particle GTPase [Streptococcus suis JS14]
gi|386581850|ref|YP_006078254.1| Signal recognition particle GTPase [Streptococcus suis SS12]
gi|386588081|ref|YP_006084482.1| Signal recognition particle GTPase [Streptococcus suis A7]
gi|145689336|gb|ABP89842.1| Signal recognition particle GTPase [Streptococcus suis 05ZYH33]
gi|145691532|gb|ABP92037.1| Signal recognition particle GTPase [Streptococcus suis 98HAH33]
gi|251815946|emb|CAZ51560.1| signal recognition particle protein [Streptococcus suis SC84]
gi|251819805|emb|CAR45741.1| signal recognition particle protein [Streptococcus suis P1/7]
gi|292558300|gb|ADE31301.1| Signal recognition particle protein [Streptococcus suis GZ1]
gi|319758083|gb|ADV70025.1| Signal recognition particle GTPase [Streptococcus suis JS14]
gi|353733996|gb|AER15006.1| Signal recognition particle GTPase [Streptococcus suis SS12]
gi|354985242|gb|AER44140.1| Signal recognition particle GTPase [Streptococcus suis A7]
Length = 512
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 169/352 (48%), Positives = 244/352 (69%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G E SE++ + PT+I++AGLQG GKTT + KLAN LK++ + +L+A D+YRPAAI
Sbjct: 87 LGSETSEIIKSPKIPTIIMMAGLQGAGKTTFTGKLANKLKQEENARPLLIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ G +V +I +QGLE+AK + D V++DTAGRLQID+A+M EL
Sbjct: 147 DQLKTLGQQIDVPVFELGNQVPALEIVRQGLEQAKANHNDYVLIDTAGRLQIDQALMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+++K P E+LLVVDAM GQEAA + FN ++ ITG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 REIKEFAQPNEILLVVDAMIGQEAANVAREFNDQLAITGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G+PIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGQPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASKEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF+ Q V MG M ++ MIPGM G A ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAGNPALANLKVDEREIARKRAIVSSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 387 ERENPDLL--TPSRRRRIANGSGNSFVEVNKFIKDFNQAKTMMQ---GVMSG 433
>gi|337750082|ref|YP_004644244.1| hypothetical protein KNP414_05850 [Paenibacillus mucilaginosus
KNP414]
gi|386725707|ref|YP_006192033.1| hypothetical protein B2K_26860 [Paenibacillus mucilaginosus K02]
gi|336301271|gb|AEI44374.1| Ffh [Paenibacillus mucilaginosus KNP414]
gi|384092832|gb|AFH64268.1| Ffh [Paenibacillus mucilaginosus K02]
Length = 457
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 168/349 (48%), Positives = 244/349 (69%), Gaps = 3/349 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S+L A PTVI++AGLQG GKTT + KLA L +Q ++ A D+YRPAAI
Sbjct: 88 MGGSQSKLARANKPPTVIMMAGLQGAGKTTSTGKLAKMLLQQNHRPLVAAADIYRPAAIK 147
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++GEQ+ VPV++ G +V P +IAKQ L+ AK N D +I+DTAGRL ID+ +M+ELK
Sbjct: 148 QLQVIGEQLKVPVFSLGDQVSPVEIAKQALQHAKDHNNDYLIIDTAGRLHIDENLMEELK 207
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+ + P E+LLVVDAMTGQ+A + F+ ++ +TG +LTKLDGD+RGGAA+SVK V+
Sbjct: 208 QIVEAVTPHEILLVVDAMTGQDAVNVAENFHKQLPLTGVVLTKLDGDTRGGAAISVKAVT 267
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK GE+M+ LEPF+P+RMA RILGMGD+L+ +EKAQ + + A+EM++K+ +A
Sbjct: 268 GCPIKFAATGEKMDALEPFHPERMASRILGMGDMLTLIEKAQAGIDADKAKEMERKLRTA 327
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEE 299
F F+DFL Q V ++G + +++ M+PG GK+ + ++ ++ ++ + A++++MT EE
Sbjct: 328 EFTFDDFLDQMEQVKKLGPLDQILDMLPGAGKMKGMKDLKVDDRQMQRIAAIVKSMTKEE 387
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 348
R P+LL SP RRKR+A SG + Q V++ + Q MR MK +M
Sbjct: 388 RANPDLL--SPSRRKRLAAGSGNSVQDVNRFIKQFDDMRKMMKQFSSMM 434
>gi|253755628|ref|YP_003028768.1| signal recognition particle protein [Streptococcus suis BM407]
gi|251818092|emb|CAZ55886.1| signal recognition particle protein [Streptococcus suis BM407]
Length = 512
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 169/352 (48%), Positives = 244/352 (69%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G E SE++ + PT+I++AGLQG GKTT + KLAN LK++ + +L+A D+YRPAAI
Sbjct: 87 LGSETSEIIKSPKIPTIIMMAGLQGAGKTTFTGKLANKLKQEENARPLLIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ G +V +I +QGLE+AK + D V++DTAGRLQID+A+M EL
Sbjct: 147 DQLKTLGQQIDVPVFELGNQVPALEIVRQGLEQAKANHNDYVLIDTAGRLQIDQALMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+++K P E+LLVVDAM GQEAA + FN ++ ITG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 REIKEFAQPNEILLVVDAMIGQEAANVAREFNDQLAITGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G+PIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGQPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASKEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF+ Q V MG M ++ MIPGM G A ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAGNPALANLKVDEREIARKRAIVSSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 387 ERENPDLL--TPSRRRRIANGSGNSFVEVNKFIKDFNQAKTMMQ---GVMSG 433
>gi|314933415|ref|ZP_07840780.1| signal recognition particle protein [Staphylococcus caprae C87]
gi|313653565|gb|EFS17322.1| signal recognition particle protein [Staphylococcus caprae C87]
Length = 455
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 167/346 (48%), Positives = 251/346 (72%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + A PTV+++ GLQG GKTT + KLA + KK K MLVAGD+YRPAAI
Sbjct: 87 MGGENTSIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAGDIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ +PVY+ G +V P QI + L+ AK++++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 DQLQTVGKQIDIPVYSEGDQVPPQQIVENALQHAKEEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++VK + P E++LVVDAMTGQ+A + +F+ ++ ++G LTKLDGD+RGGAALS++ V
Sbjct: 207 QEVKEISKPDEIMLVVDAMTGQDAVNVAQSFDDQLDVSGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ ++K + ++A+I++MTP+
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER PE L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERSNPETLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|403061474|ref|YP_006649690.1| signal recognition particle protein [Streptococcus suis S735]
gi|402808800|gb|AFR00292.1| signal recognition particle protein [Streptococcus suis S735]
Length = 512
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 169/352 (48%), Positives = 244/352 (69%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G E SE++ + PT+I++AGLQG GKTT + KLAN LK++ + +L+A D+YRPAAI
Sbjct: 87 LGSETSEIIKSPKIPTIIMMAGLQGAGKTTFTGKLANKLKQEENARPLLIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ G +V +I +QGLE+AK + D V++DTAGRLQID+A+M EL
Sbjct: 147 DQLKTLGQQIDVPVFELGNQVPALEIVRQGLEQAKANHNDYVLIDTAGRLQIDQALMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+++K P E+LLVVDAM GQEAA + FN ++ ITG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 REIKEFAQPNEILLVVDAMIGQEAANVAREFNDQLAITGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G+PIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGQPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASKEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF+ Q V MG M ++ MIPGM G A ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAGNPALANLKVDEREIARKRAIVSSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 387 ERENPDLL--TPSRRRRIANGSGNSFVEVNKFIKDFNQAKTMMQ---GVMSG 433
>gi|379722928|ref|YP_005315059.1| hypothetical protein PM3016_5192 [Paenibacillus mucilaginosus 3016]
gi|378571600|gb|AFC31910.1| Ffh [Paenibacillus mucilaginosus 3016]
Length = 470
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 168/349 (48%), Positives = 244/349 (69%), Gaps = 3/349 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S+L A PTVI++AGLQG GKTT + KLA L +Q ++ A D+YRPAAI
Sbjct: 88 MGGSQSKLARANKPPTVIMMAGLQGAGKTTSTGKLAKMLLQQNHRPLVAAADIYRPAAIK 147
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++GEQ+ VPV++ G +V P +IAKQ L+ AK N D +I+DTAGRL ID+ +M+ELK
Sbjct: 148 QLQVIGEQLKVPVFSLGDQVSPVEIAKQALQHAKDHNNDYLIIDTAGRLHIDENLMEELK 207
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+ + P E+LLVVDAMTGQ+A + F+ ++ +TG +LTKLDGD+RGGAA+SVK V+
Sbjct: 208 QIVEAVTPHEILLVVDAMTGQDAVNVAENFHKQLPLTGVVLTKLDGDTRGGAAISVKAVT 267
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK GE+M+ LEPF+P+RMA RILGMGD+L+ +EKAQ + + A+EM++K+ +A
Sbjct: 268 GCPIKFAATGEKMDALEPFHPERMASRILGMGDMLTLIEKAQAGIDADKAKEMERKLRTA 327
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEE 299
F F+DFL Q V ++G + +++ M+PG GK+ + ++ ++ ++ + A++++MT EE
Sbjct: 328 EFTFDDFLDQMEQVKKLGPLDQILDMLPGAGKMKGMKDLKVDDRQMQRIAAIVKSMTKEE 387
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 348
R P+LL SP RRKR+A SG + Q V++ + Q MR MK +M
Sbjct: 388 RANPDLL--SPSRRKRLAAGSGNSVQDVNRFIKQFDDMRKMMKQFSSMM 434
>gi|193216162|ref|YP_001997361.1| signal recognition particle protein [Chloroherpeton thalassium ATCC
35110]
gi|193089639|gb|ACF14914.1| signal recognition particle protein [Chloroherpeton thalassium ATCC
35110]
Length = 449
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 175/352 (49%), Positives = 250/352 (71%), Gaps = 5/352 (1%)
Query: 1 MGGEVSELVFAKSR-PTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAI 59
MGGE ++ SR P VI++AGLQG GKTT +AKLAN LKK+G++ +L+A DVYRPAAI
Sbjct: 86 MGGEQKDINLKTSRMPAVIMVAGLQGSGKTTFTAKLANLLKKKGRAPLLIAADVYRPAAI 145
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL LG Q+GVPV++ E + AKQG+E AK+ + +V IVDTAGRLQID+ MM E
Sbjct: 146 EQLKTLGAQIGVPVFSI-EEKDALKAAKQGIEFAKQNSKNVAIVDTAGRLQIDEEMMAEA 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +KR L+P E+L VVD+M GQEA FN + G +LTK+DGD+RGGAALS+K V
Sbjct: 205 ERLKRELSPEEILFVVDSMIGQEAVNTAKVFNDRLDFDGVVLTKMDGDTRGGAALSIKTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK + +GE+++DL+ FYP+RMA RILGMGD++SFVEKAQE + E +++QK+++
Sbjct: 265 VDKPIKFLSQGEKVDDLDIFYPERMAQRILGMGDIVSFVEKAQETLDLEKTQKLQKRLIE 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F+ DF +Q + + +MGS+ +I MIPG+ K+ P Q + E +LK++EA+I +MT +E
Sbjct: 325 NEFNLEDFYEQLQELKKMGSLQNLIDMIPGLSKVVPKQEID-ESNLKVIEAIINSMTKDE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 351
R+KP ++ S RR R+A+ SG Q V+ L+ Q +M+ MK++ + + G
Sbjct: 384 RQKPGIINGS--RRSRIAKGSGTRVQDVNMLLKQFMEMKKMMKSVTKMAKSG 433
>gi|389856624|ref|YP_006358867.1| signal recognition particle protein [Streptococcus suis ST1]
gi|353740342|gb|AER21349.1| signal recognition particle protein [Streptococcus suis ST1]
Length = 524
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 169/352 (48%), Positives = 244/352 (69%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G E SE++ + PT+I++AGLQG GKTT + KLAN LK++ + +L+A D+YRPAAI
Sbjct: 87 LGSETSEIIKSPKIPTIIMMAGLQGAGKTTFTGKLANKLKQEENARPLLIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ G +V +I +QGLE+AK + D V++DTAGRLQID+A+M EL
Sbjct: 147 DQLKTLGQQIDVPVFELGNQVPALEIVRQGLEQAKANHNDYVLIDTAGRLQIDQALMAEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+++K P E+LLVVDAM GQEAA + FN ++ ITG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 REIKEFAQPNEILLVVDAMIGQEAANVAREFNDQLAITGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G+PIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGQPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASKEYDEKKSLELTEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF+ Q V MG M ++ MIPGM G A ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAGNPALANLKVDEREIARKRAIVSSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 387 ERENPDLL--TPSRRRRIANGSGNSFVEVNKFIKDFNQAKTMMQ---GVMSG 433
>gi|315639588|ref|ZP_07894728.1| signal recognition particle protein [Enterococcus italicus DSM
15952]
gi|315484549|gb|EFU75005.1| signal recognition particle protein [Enterococcus italicus DSM
15952]
Length = 472
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 166/332 (50%), Positives = 239/332 (71%), Gaps = 4/332 (1%)
Query: 15 PTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAIDQLVILGEQVGVPV 73
PT+I++ GLQG GKTT + KLAN LKK + +++AGDVYRPAAIDQL +LG+Q+ VPV
Sbjct: 101 PTIIMMVGLQGAGKTTFAGKLANRLKKTENARPLMIAGDVYRPAAIDQLKVLGQQLDVPV 160
Query: 74 YTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLL 133
+ GT V P +I +QGL A +K D V++DTAGRL +D+A+M+ELK +K + P E+LL
Sbjct: 161 FDMGTTVSPVEIVRQGLAVAAEKKNDYVLIDTAGRLHVDEALMEELKQIKELAQPNEILL 220
Query: 134 VVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERM 193
VVDAMTGQ+A + +FN ++GITG ++TKLDGD+RGGAALS++ V+G PIK G GE++
Sbjct: 221 VVDAMTGQDAVTVADSFNQQLGITGVVITKLDGDTRGGAALSIRSVTGAPIKFTGTGEKL 280
Query: 194 EDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRT 253
DLE F+PDRMA RILGMGD+L+ +EKAQ+ ++ AEE+ KK+ +FDFNDF++Q
Sbjct: 281 TDLEIFHPDRMASRILGMGDMLTLIEKAQQDYDEKKAEELAKKMKENSFDFNDFIEQLDQ 340
Query: 254 VARMGSMSRVIGMIPGMGKITPAQVREAE-KSLKIMEAMIEAMTPEEREKPELLAESPVR 312
V MG + ++ MIPGM ++ + + K + +A++ +MTPEERE P+LL +P R
Sbjct: 341 VMSMGPLEDLMKMIPGMSQVPGMDNFKVDPKDIARKKAIVFSMTPEERENPDLL--NPSR 398
Query: 313 RKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
R+R+A SG +V++++ Q + R M+ +
Sbjct: 399 RRRIAAGSGNNVVEVNRMIKQFKEARTMMQKM 430
>gi|419707043|ref|ZP_14234549.1| Signal recognition particle protein [Streptococcus salivarius PS4]
gi|383283283|gb|EIC81241.1| Signal recognition particle protein [Streptococcus salivarius PS4]
Length = 520
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 241/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E SE+ + PT+I++ GLQG GKTT + KLAN L K+Q M++A D+YRPAAI
Sbjct: 87 LGSETSEIEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEQEARPMMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I K GLE+A+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTETPALEIVKNGLEQARANKNDYVLIDTAGRLQIDETLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K +P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E+
Sbjct: 207 RDIKDFAHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAALSIREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ M+PGM P A V+ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NPALANVKVDEKQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|423222601|ref|ZP_17209071.1| signal recognition particle protein [Bacteroides cellulosilyticus
CL02T12C19]
gi|392641888|gb|EIY35661.1| signal recognition particle protein [Bacteroides cellulosilyticus
CL02T12C19]
Length = 439
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/347 (49%), Positives = 239/347 (68%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE +E+ + +P VIL++GLQG GKTT S KLA LK K+ K +LVA DVYRPAAI
Sbjct: 86 MGGETAEIDL-EGKPAVILMSGLQGSGKTTFSGKLARMLKTKKNKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +L EQ+GVP+Y+ P +IA+ ++EAK K DVVIVDTAGRL +D+ MM+E+
Sbjct: 145 EQLCVLAEQIGVPIYSEPDSKNPVKIAENAIQEAKAKGYDVVIVDTAGRLAVDEEMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K+ +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 AAIKKAINPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAALSIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+++ ++ F+P RM+ RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VNKPIKFVGTGEKLDAIDQFHPSRMSDRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP E
Sbjct: 325 NQFDFNDFLSQIAQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPAE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R P LL S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 384 RSNPALLNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|419782775|ref|ZP_14308573.1| signal recognition particle protein [Streptococcus oralis SK610]
gi|383182988|gb|EIC75536.1| signal recognition particle protein [Streptococcus oralis SK610]
Length = 523
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/353 (48%), Positives = 245/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGL +A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLAQAQANHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|422876404|ref|ZP_16922874.1| signal recognition particle protein [Streptococcus sanguinis
SK1056]
gi|332361212|gb|EGJ39016.1| signal recognition particle protein [Streptococcus sanguinis
SK1056]
Length = 524
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 244/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT S KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFSGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 SDVKALANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 386 AERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|422823584|ref|ZP_16871772.1| signal recognition particle protein [Streptococcus sanguinis SK405]
gi|324992911|gb|EGC24831.1| signal recognition particle protein [Streptococcus sanguinis SK405]
Length = 524
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 244/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ A PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKAPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 SDVKALANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 386 AERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|205373346|ref|ZP_03226150.1| signal recognition particle protein [Bacillus coahuilensis m4-4]
Length = 382
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 169/346 (48%), Positives = 250/346 (72%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ + PTV+++ GLQG GKTT + KL+N L KK + +LVA D+YRPAAI
Sbjct: 22 MGGEQSKIAVSNKPPTVVMMVGLQGAGKTTTTGKLSNLLRKKYNRKPLLVAADIYRPAAI 81
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAK+G+E+AK+ + D V++DTAGRL +D+ +MDEL
Sbjct: 82 KQLETLGKQLNLPVFSMGDQVSPVEIAKKGIEKAKEDHQDYVLIDTAGRLHVDENLMDEL 141
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K + P E+ LVVDAMTGQ+A + +F+ +GITG +LTKLDGD+RGGAALS++ V
Sbjct: 142 KQIKELSKPDEIFLVVDAMTGQDAVNVAKSFDDALGITGVVLTKLDGDTRGGAALSIRSV 201
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG GE+M+ LEPF+P+RMA RILGMGDVLS +EKAQ + +E A+E++ K+ +
Sbjct: 202 TEKPIKFVGLGEKMDALEPFHPERMAQRILGMGDVLSLIEKAQSNIDEEKAKELENKMRT 261
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
A+F F+DFL Q V +MG + +I M+PG K+ ++ +K L +EA+I++MT
Sbjct: 262 ASFTFDDFLDQLGQVKQMGPLDELIKMMPGANKMKGLDNLKIDDKQLAHVEAIIQSMTKA 321
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E+ +PE++ + R+KR+A SG+ Q+V++L+ Q M+ MK +
Sbjct: 322 EKTQPEIINAN--RKKRIAAGSGRPVQEVNRLLKQFEDMKKMMKQM 365
>gi|323489558|ref|ZP_08094785.1| signal recognition particle-like (SRP) component [Planococcus
donghaensis MPA1U2]
gi|323396689|gb|EGA89508.1| signal recognition particle-like (SRP) component [Planococcus
donghaensis MPA1U2]
Length = 452
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 168/349 (48%), Positives = 250/349 (71%), Gaps = 4/349 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE ++ F+ +PTVI++ GLQG GKTT S KLAN L+ K + +LVA DVYRPAAI
Sbjct: 87 MGGEERKIEFSTKQPTVIMMVGLQGAGKTTTSGKLANLLRRKHNRKPLLVAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL +G+Q+ +PV++ GT++ P +IA+Q +E AK +++D VI+DTAGRL +D+A+M EL
Sbjct: 147 QQLETIGKQLSLPVFSKGTDMSPVEIARQAIEHAKAEHLDTVIIDTAGRLHVDEALMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
KD++ + P E+ LVVD+MTGQ+A + F+ IGITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KDIRALKEPDEIFLVVDSMTGQDAVNVAQNFDEAIGITGVVLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG GE+M+ LE F+P+RMA RILGMGD+LS +EKAQ + + A+E+++K +
Sbjct: 267 TQKPIKFVGMGEKMDALEAFHPERMASRILGMGDMLSLIEKAQSSVDEVKAKELEEKFRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKS-LKIMEAMIEAMTPE 298
+ F F+DFL+Q V +MG + ++ M+PG KI + + ++S + +EA+I +MT +
Sbjct: 327 STFTFDDFLEQMSQVKQMGPLDEILKMLPGANKIKGLENAKVDESQMDRVEAIIYSMTKK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
E+ PE++ S R+KR+A+ SG Q V++L+ Q M+ MK + G+
Sbjct: 387 EKTTPEIINAS--RKKRIAKGSGTNIQDVNRLLKQFEDMKKMMKQMSGM 433
>gi|449015603|dbj|BAM79005.1| signal recognition particle SRP54 homolog ffh [Cyanidioschyzon
merolae strain 10D]
Length = 608
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 176/350 (50%), Positives = 245/350 (70%), Gaps = 11/350 (3%)
Query: 13 SRPTVILLAGLQGVGKTTVSAKLANYL---KKQGKSCMLVAGDVYRPAAIDQLVILGEQ- 68
++PTVIL+AGLQG GKTT SAKLA L K+ K +LVA DV RPAA++QL LG+Q
Sbjct: 200 TKPTVILMAGLQGAGKTTQSAKLARLLQTEKRSRKKVLLVAADVQRPAAVEQLQTLGQQI 259
Query: 69 ---VGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 125
V +P V ++A + L+ AK+K D +IVDTAGR ID+ +M+EL+ +KRV
Sbjct: 260 ETEVFIPAMVGTGSVTALEVATRALDYAKQKAFDFMIVDTAGRQVIDERLMEELQQIKRV 319
Query: 126 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 185
L+P E+LLVVD M GQEAA + F+ IGITGAILTK+DGD+RGGAALS+K++SG PIK
Sbjct: 320 LSPAEILLVVDGMIGQEAANITRAFHERIGITGAILTKMDGDTRGGAALSIKQISGAPIK 379
Query: 186 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 245
+G GE+++ LE FYPDRMA RILGMGD+++ VE+AQE + +++AE++ +K++ A FDFN
Sbjct: 380 FIGVGEKLDKLEKFYPDRMASRILGMGDIITLVERAQEAVDEKEAEQLARKMLEARFDFN 439
Query: 246 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 304
DFL+QTR V MGS + V+ ++PG+ G + Q+R EK L++ E++I +MTP ER P+
Sbjct: 440 DFLRQTRFVRSMGSFAGVLKLLPGVSGMLKEDQLRAGEKRLRLAESVINSMTPRERANPD 499
Query: 305 LLA---ESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 351
LL + R +R+A+ SG++ +QV L+ MR M + M GG
Sbjct: 500 LLTVDKTAASRMRRIARGSGRSLEQVESLMRDFVNMRNVMAQMSRRMMGG 549
>gi|227544363|ref|ZP_03974412.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus reuteri
CF48-3A]
gi|338202518|ref|YP_004648663.1| signal recognition particle protein [Lactobacillus reuteri SD2112]
gi|227185626|gb|EEI65697.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus reuteri
CF48-3A]
gi|336447758|gb|AEI56373.1| signal recognition particle protein [Lactobacillus reuteri SD2112]
Length = 481
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 176/364 (48%), Positives = 245/364 (67%), Gaps = 13/364 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L A PTVI++ GLQG GKTT + KLA LK + + M +A DVYRPAAI
Sbjct: 87 MGEEAVPLNKAPHIPTVIMMVGLQGAGKTTTAGKLALRLKNENHARPMFIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL + +Q+ VPV+ GT+V P +I ++G+E AKK + D VI+DTAGRLQID+ +MDEL
Sbjct: 147 TQLQQVADQIDVPVFEKGTDVDPVEIVREGMEVAKKNHNDYVIIDTAGRLQIDEQLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++K ++NP E+LLV+D+MTGQ A F+ ++ ITG +LTKLDGD+RGGAA+S++ V
Sbjct: 207 ANIKELVNPNEILLVIDSMTGQNAVNTAQGFDDKLDITGVVLTKLDGDTRGGAAMSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG GE+MEDL+ F+PDRMA RILGMGD+++ +EKAQ+ +E A+E K+
Sbjct: 267 TGKPIKFVGEGEKMEDLDVFHPDRMASRILGMGDMMTLIEKAQKNFDEEQAQETMDKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FD+NDFL Q V +MG + +I M+PGM PA + K + A++ +MTP
Sbjct: 327 NTFDYNDFLAQMDQVTKMGPLENIIKMMPGMAN-NPALKNLNLDPKQFAHIRAIVLSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-------NLMGVMEG 350
EERE P+L+ +P RR+R+A +G+ +V++++ Q QMR MK N M M G
Sbjct: 386 EERENPDLM--NPSRRRRLAAGAGRPIVEVNRMIKQFNQMRKMMKQVTNGNFNGMQNMFG 443
Query: 351 GSLP 354
G +P
Sbjct: 444 GQMP 447
>gi|419453246|ref|ZP_13993219.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP03]
gi|379626955|gb|EHZ91571.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP03]
Length = 514
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 245/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 78 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 137
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 138 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 197
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 198 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 257
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 258 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 317
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MT
Sbjct: 318 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTS 376
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 377 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 424
>gi|302345690|ref|YP_003814043.1| signal recognition particle protein [Prevotella melaninogenica ATCC
25845]
gi|302150218|gb|ADK96480.1| signal recognition particle protein [Prevotella melaninogenica ATCC
25845]
Length = 450
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 178/347 (51%), Positives = 240/347 (69%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE L + RP++IL++GLQG GKTT S KLAN LK K+ K+ +LVA DVYRPAAI
Sbjct: 86 MGGEAVGLNLS-GRPSIILMSGLQGSGKTTFSGKLANMLKTKEHKNPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ++GEQVGV VY+ ++IA L EAK K DVVI+DTAGRL +D+ MM+E+
Sbjct: 145 DQLKVVGEQVGVAVYSEPENKNVNEIADHALAEAKAKGHDVVIIDTAGRLAVDEEMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K ++P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 ESLKNHVHPDETLFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A+ +QKKI
Sbjct: 265 VTKPIKFIGTGEKMEAIDVFHPGRMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP+E
Sbjct: 325 NQFDFNDFYNQIQQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIEAIIQSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R PELL S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 384 RTNPELLNNS--RRQRIAKGSGTNIQEVNRLIKQFDQTRKMMKMVTG 428
>gi|199597126|ref|ZP_03210558.1| Signal recognition particle GTPase [Lactobacillus rhamnosus HN001]
gi|258508639|ref|YP_003171390.1| signal recognition particle protein [Lactobacillus rhamnosus GG]
gi|385828300|ref|YP_005866072.1| signal recognition particle protein [Lactobacillus rhamnosus GG]
gi|199591930|gb|EDZ00005.1| Signal recognition particle GTPase [Lactobacillus rhamnosus HN001]
gi|257148566|emb|CAR87539.1| Signal recognition particle protein [Lactobacillus rhamnosus GG]
gi|259649945|dbj|BAI42107.1| signal recognition particle protein [Lactobacillus rhamnosus GG]
Length = 478
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 174/361 (48%), Positives = 248/361 (68%), Gaps = 8/361 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG L A PTVI++AGLQG GKTT KL+ YL + K+ +L+A DVYRPAAI
Sbjct: 87 MGEAAVPLNKAPHIPTVIMMAGLQGAGKTTTVGKLSKYLMENEKARPLLIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ VPV+ GT+ P +I +QGL AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLQTIGKQLNVPVFEMGTDTDPVEIVRQGLATAKENKNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K++K + +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KNIKELAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A+EM +KI
Sbjct: 267 TGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKTYDEKQAQEMAEKIRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
+FDFNDFL Q +++MG + ++ MIPGM A V+ K + M+A++ +MTP+
Sbjct: 327 NSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVYSMTPK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSN 358
ERE P+ L +P RR+R+A SG+ +V++++ Q Q K +M M G++ L
Sbjct: 387 EREDPDSL--NPSRRRRIAAGSGRPVVEVNRMIKQFNQ----SKQMMNQMSKGNMKGLDG 440
Query: 359 L 359
L
Sbjct: 441 L 441
>gi|194466489|ref|ZP_03072476.1| signal recognition particle protein [Lactobacillus reuteri 100-23]
gi|194453525|gb|EDX42422.1| signal recognition particle protein [Lactobacillus reuteri 100-23]
Length = 481
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 176/364 (48%), Positives = 245/364 (67%), Gaps = 13/364 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L A PTVI++ GLQG GKTT + KLA LK + + M +A DVYRPAAI
Sbjct: 87 MGEEAVPLNKAPHIPTVIMMVGLQGAGKTTTAGKLALRLKNENHARPMFIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL + +Q+ VPV+ GT+V P +I ++G+E AKK + D VI+DTAGRLQID+ +MDEL
Sbjct: 147 TQLQQVADQIDVPVFEKGTDVDPVEIVREGMEVAKKNHNDYVIIDTAGRLQIDEQLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++K ++NP E+LLV+D+MTGQ A F+ ++ ITG ILTKLDGD+RGGAA+S++ V
Sbjct: 207 ANIKELVNPNEILLVIDSMTGQNAVNTAQGFDDKLNITGVILTKLDGDTRGGAAMSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG GE+MEDL+ F+PDRMA RILGMGD+++ +EKAQ+ +E A+E K+
Sbjct: 267 TGKPIKFVGEGEKMEDLDVFHPDRMASRILGMGDMMTLIEKAQKNFDEEQAQETMDKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FD+NDFL Q V +MG + +I M+PGM PA + K + A++ +MTP
Sbjct: 327 NTFDYNDFLAQMDQVTKMGPLENIIKMMPGMAN-NPALKNLNLDPKQFAHIRAIVLSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-------NLMGVMEG 350
EERE P+++ +P RR+R+A +G+ +V++++ Q QMR MK N M M G
Sbjct: 386 EERESPDIM--NPSRRRRLAAGAGRPIVEVNRMIKQFNQMRKMMKQVTNGNFNGMQNMFG 443
Query: 351 GSLP 354
G +P
Sbjct: 444 GQMP 447
>gi|299821777|ref|ZP_07053665.1| signal recognition particle protein [Listeria grayi DSM 20601]
gi|299817442|gb|EFI84678.1| signal recognition particle protein [Listeria grayi DSM 20601]
Length = 453
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 173/346 (50%), Positives = 250/346 (72%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTV+++ GLQG GKTT + KLAN L KK + +LVA D+YRPAAI
Sbjct: 87 MGGEESKIAVADKPPTVLMMVGLQGAGKTTTTGKLANLLRKKYNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK+ ++D VI+DTAGRL ID A+MDEL
Sbjct: 147 QQLETLGKQLSMPVFSLGDQVSPVEIAKQAIAKAKEDHLDYVIIDTAGRLHIDDALMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K VK V +P E+ LVVD+MTGQ+A + +FN ++ ++G ILTKLDGD+RGGAALS++ V
Sbjct: 207 KQVKEVASPDEIFLVVDSMTGQDAVNVAESFNEQLEVSGVILTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIKLV GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + E A+EM++K+
Sbjct: 267 TGKPIKLVATGEKMEALETFHPDRMASRILGMGDVLSLIEKAQVDIDTEKAKEMEQKLKD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
+ +DFL+Q + V +MG + ++ M+PG GK+ ++ +K L +EA+I++MT
Sbjct: 327 NSMTLDDFLEQLQQVKQMGPLDELMKMLPGAGKMKGMDNMQVDDKQLGHIEAIIKSMTKM 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E++ P+++ RRKR+A+ SG+ Q+V++L+ Q +M+ MK +
Sbjct: 387 EKDNPDIINAG--RRKRIARGSGRPIQEVNRLLKQFNEMKKMMKQM 430
>gi|418576380|ref|ZP_13140526.1| signal recognition particle [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379325442|gb|EHY92574.1| signal recognition particle [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 455
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 165/346 (47%), Positives = 248/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S + A PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI
Sbjct: 87 MGGENSTITMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ +PVY+ G +VKP QI + ++ AK++++D VI+DTAGRL +D+ +M EL
Sbjct: 147 DQLQTVGKQIDIPVYSEGDQVKPQQIVENAIKHAKEEHLDFVIIDTAGRLHVDETLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + P E++LVVDAMTGQ+A + +F+ ++ ++G LTKLDGD+RGGAALS++ V
Sbjct: 207 SDVKEITKPHEIMLVVDAMTGQDAVNVAQSFDEQLEVSGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LEPF+P+RMA RILGMGDVLS +EKAQ+ + ++ A++++KK+ +
Sbjct: 267 TQKPIKFVGMSEKLDGLEPFHPERMASRILGMGDVLSLIEKAQQDVDEDKAKDLEKKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ EK + ++A+I++MTP
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGIDKLNMNEKQIDHIKAIIQSMTPS 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERNDPDTLNVS--RKKRIAKGSGRSVQEVNRLMKQFNDMKKMMKQF 430
>gi|365902815|ref|ZP_09440638.1| signal recognition particle protein [Lactobacillus malefermentans
KCTC 3548]
Length = 478
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 176/364 (48%), Positives = 251/364 (68%), Gaps = 13/364 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L + PT+I+++GLQG GKTT KLAN LK K+ +++A D+YRPAAI
Sbjct: 87 MGEEAVPLNKSDKIPTIIMMSGLQGAGKTTTVGKLANKLKTDEKARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQLV +GEQ+ VPV+ GT+V P +I ++GLE+A + + D V +DTAGRLQID+ +M EL
Sbjct: 147 DQLVQVGEQIDVPVFEMGTDVNPVEIVRKGLEKAAEDHNDYVFIDTAGRLQIDEQLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
D+K + +P E+LLV+DAMTGQ A A F+ ++ ITG +LTKLDGD+RGGAALS++
Sbjct: 207 SDIKELAHPDEILLVIDAMTGQNAVATAEGFDKKLDITGVVLTKLDGDTRGGAALSIRAA 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG+GE+M DL+ F+PDRMA RILGMGD+LS +EK Q+ + A+E+ +K+
Sbjct: 267 TGKPIKFVGQGEKMADLDVFHPDRMASRILGMGDMLSLIEKTQKKFDDKQAQELTEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDFL Q + MG M +I MIPGM PA V+ K ++ +A++ +MT
Sbjct: 327 NTFDFNDFLDQMTQIQSMGPMEDLIKMIPGMAN-NPALKNVQMDPKDIEHTKAVVYSMTT 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-----NLMGV--MEG 350
ERE+PE+L +P RR+R+A SG+ +V++++ Q +M+ M+ N+ G+ + G
Sbjct: 386 AERERPEIL--NPSRRRRIAAGSGRPIHEVNRMIKQFGEMKKMMQQASNGNMSGMEGLMG 443
Query: 351 GSLP 354
GS+P
Sbjct: 444 GSMP 447
>gi|315282799|ref|ZP_07871124.1| signal recognition particle protein [Listeria marthii FSL S4-120]
gi|313613554|gb|EFR87373.1| signal recognition particle protein [Listeria marthii FSL S4-120]
Length = 450
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 172/346 (49%), Positives = 248/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI
Sbjct: 87 MGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ +E+AK++++D VI+DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEEHLDYVIIDTAGRLHIDETLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K VK + PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KQVKEIAKPTEILLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK + GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + E + M++K+
Sbjct: 267 TGKPIKFIATGEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAMEQKMKD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
+ +DFL Q + V +MG + ++ M+PG K+ + +K L +EA+I++MT
Sbjct: 327 NSMTLDDFLDQLQQVKQMGPLDELLKMMPGANKMKGLDNMNVDDKQLGHIEAIIKSMTKN 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E++ P+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 387 EKDNPDIINAS--RRKRIARGSGRPVQEINRLLKQFAEMKKMMKQM 430
>gi|228476757|ref|ZP_04061423.1| signal recognition particle protein [Streptococcus salivarius
SK126]
gi|340398712|ref|YP_004727737.1| signal recognition particle subunit FFH/SRP54 (Srp54)
[Streptococcus salivarius CCHSS3]
gi|387761204|ref|YP_006068181.1| signal recognition particle protein [Streptococcus salivarius 57.I]
gi|228251628|gb|EEK10729.1| signal recognition particle protein [Streptococcus salivarius
SK126]
gi|338742705|emb|CCB93210.1| signal recognition particle subunit FFH/SRP54 (Srp54)
[Streptococcus salivarius CCHSS3]
gi|339291971|gb|AEJ53318.1| signal recognition particle protein [Streptococcus salivarius 57.I]
Length = 520
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 240/353 (67%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E SE+ + PT+I++ GLQG GKTT + KLAN L K+Q M++A D+YRPAAI
Sbjct: 87 LGSETSEIEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEQEARPMMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I K GLE+A+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTETPAVEIVKNGLEQARANKNDYVLIDTAGRLQIDETLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
D+K +P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E+
Sbjct: 207 HDIKDFAHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAALSIREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ M+PGM P A V+ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NPALANVKVDEKQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|116490535|ref|YP_810079.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni PSU-1]
gi|290889938|ref|ZP_06553024.1| hypothetical protein AWRIB429_0414 [Oenococcus oeni AWRIB429]
gi|419757833|ref|ZP_14284158.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB304]
gi|419857504|ref|ZP_14380210.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB202]
gi|419858985|ref|ZP_14381642.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni DSM 20252 = AWRIB129]
gi|421184274|ref|ZP_15641698.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB318]
gi|421187982|ref|ZP_15645323.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB419]
gi|421193206|ref|ZP_15650457.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB553]
gi|421194499|ref|ZP_15651719.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB568]
gi|421197348|ref|ZP_15654525.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB576]
gi|116091260|gb|ABJ56414.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni PSU-1]
gi|290480380|gb|EFD89018.1| hypothetical protein AWRIB429_0414 [Oenococcus oeni AWRIB429]
gi|399905342|gb|EJN92785.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB304]
gi|399966655|gb|EJO01175.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB419]
gi|399967558|gb|EJO02031.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB318]
gi|399973188|gb|EJO07374.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB553]
gi|399975576|gb|EJO09627.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB576]
gi|399977917|gb|EJO11888.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB568]
gi|410497346|gb|EKP88820.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni DSM 20252 = AWRIB129]
gi|410497768|gb|EKP89237.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB202]
Length = 507
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 242/366 (66%), Gaps = 10/366 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG + L + PTVI++AGLQG GKTT AKLAN LK + + +L+A DVYRPAAI
Sbjct: 87 MGEKAVPLNKSSKIPTVIMMAGLQGAGKTTTVAKLANRLKDENHARPLLIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL LG+Q+ +PV+ G P +I + GL++A++ D V +DTAGRLQID+ +M EL
Sbjct: 147 EQLKSLGDQLSIPVFDEGVGENPRKIVEDGLKQARENKNDYVFIDTAGRLQIDQVLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
KD++++ P E+LL VDAMTGQ A FN +GITG +LTKLDGD+RGGAALS++EV
Sbjct: 207 KDIEKMAEPDEILLTVDAMTGQNATETARGFNDALGITGVVLTKLDGDTRGGAALSIREV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG GE++ DL+ FYPDRMA RILGMGDVLS +EK Q+ ++ A E +K+
Sbjct: 267 TGKPIKFVGEGEKVTDLDVFYPDRMASRILGMGDVLSLIEKTQKDFDEKQASEQLQKLQE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
FDFNDFL+Q + + MG M ++ MIPGM P AQ + K MEA++ +MTP
Sbjct: 327 NTFDFNDFLEQLKQIQNMGPMEDMLKMIPGMAN-NPAMAQAQIGPKDFSHMEAIVYSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
ER PELL +P RR+R+A SG+ V++L+ Q QMR M G LPA
Sbjct: 386 GERVDPELL--TPARRRRIAAGSGRPVVDVNRLIKQFKQMRQMMYKFTN--GKGGLPA-- 439
Query: 358 NLEDAL 363
+ED L
Sbjct: 440 GMEDML 445
>gi|242373529|ref|ZP_04819103.1| signal recognition particle protein Ffh [Staphylococcus epidermidis
M23864:W1]
gi|242348892|gb|EES40494.1| signal recognition particle protein Ffh [Staphylococcus epidermidis
M23864:W1]
Length = 455
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 167/346 (48%), Positives = 251/346 (72%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + A PTV+++ GLQG GKTT + KLA + KK K MLVAGD+YRPAAI
Sbjct: 87 MGGENTSIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAGDIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ +PVY+ G +V P QI + L+ AK++++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 DQLQTVGKQIDIPVYSEGDQVPPQQIVENALKHAKEEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++VK + P E++LVVDAMTGQ+A + +F+ ++ ++G LTKLDGD+RGGAALS++ V
Sbjct: 207 QEVKEISKPDEIMLVVDAMTGQDAVNVAQSFDDQLDVSGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ ++K + ++A+I++MTP+
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER PE L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERSNPETLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|148985187|ref|ZP_01818426.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP3-BS71]
gi|387757611|ref|YP_006064590.1| signal recognition particle protein [Streptococcus pneumoniae
OXC141]
gi|418232322|ref|ZP_12858909.1| signal recognition particle protein [Streptococcus pneumoniae
GA07228]
gi|418236782|ref|ZP_12863350.1| signal recognition particle protein [Streptococcus pneumoniae
GA19690]
gi|419480169|ref|ZP_14019975.1| signal recognition particle protein [Streptococcus pneumoniae
GA19101]
gi|419499865|ref|ZP_14039559.1| signal recognition particle protein [Streptococcus pneumoniae
GA47597]
gi|147922632|gb|EDK73750.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP3-BS71]
gi|301800200|emb|CBW32808.1| signal recognition particle protein [Streptococcus pneumoniae
OXC141]
gi|353887049|gb|EHE66829.1| signal recognition particle protein [Streptococcus pneumoniae
GA07228]
gi|353893014|gb|EHE72762.1| signal recognition particle protein [Streptococcus pneumoniae
GA19690]
gi|379570740|gb|EHZ35701.1| signal recognition particle protein [Streptococcus pneumoniae
GA19101]
gi|379599173|gb|EHZ63956.1| signal recognition particle protein [Streptococcus pneumoniae
GA47597]
gi|429316237|emb|CCP35909.1| signal recognition particle protein [Streptococcus pneumoniae
SPN034156]
gi|429319579|emb|CCP32862.1| signal recognition particle protein [Streptococcus pneumoniae
SPN034183]
gi|429321396|emb|CCP34836.1| signal recognition particle protein [Streptococcus pneumoniae
SPN994039]
gi|429323216|emb|CCP30877.1| signal recognition particle protein [Streptococcus pneumoniae
SPN994038]
Length = 523
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 245/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKVLAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MT
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTS 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|450002251|ref|ZP_21825979.1| signal recognition particle protein [Streptococcus mutans N29]
gi|449183368|gb|EMB85352.1| signal recognition particle protein [Streptococcus mutans N29]
Length = 516
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 170/354 (48%), Positives = 243/354 (68%), Gaps = 9/354 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQIKVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
+FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEDEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 351
EERE P+LL +P RR+R+A SG T V++ + Q + K + GVM GG
Sbjct: 386 EERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSGG 434
>gi|288802708|ref|ZP_06408146.1| signal recognition particle protein [Prevotella melaninogenica D18]
gi|288334858|gb|EFC73295.1| signal recognition particle protein [Prevotella melaninogenica D18]
Length = 450
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 177/347 (51%), Positives = 240/347 (69%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE L + RP++IL++GLQG GKTT S KLAN LK K+ K+ +LVA DVYRPAAI
Sbjct: 86 MGGEAVGLNLS-GRPSIILMSGLQGSGKTTFSGKLANMLKTKEHKNPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ++GEQVGV VY+ ++IA L EAK K D+VI+DTAGRL +D+ MM+E+
Sbjct: 145 DQLKVVGEQVGVAVYSEPENKNVNEIADHALAEAKAKGHDIVIIDTAGRLAVDEEMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K ++P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 ESLKNHVHPDETLFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A+ +QKKI
Sbjct: 265 VTKPIKFIGTGEKMEAIDVFHPGRMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP+E
Sbjct: 325 NQFDFNDFYNQIQQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIEAIIQSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R PELL S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 384 RTNPELLNNS--RRQRIAKGSGTNIQEVNRLIKQFDQTRKMMKMVTG 428
>gi|24379497|ref|NP_721452.1| signal recognition particle protein [Streptococcus mutans UA159]
gi|449864523|ref|ZP_21778423.1| signal recognition particle protein [Streptococcus mutans U2B]
gi|449870470|ref|ZP_21780642.1| signal recognition particle protein [Streptococcus mutans 8ID3]
gi|449984811|ref|ZP_21819282.1| signal recognition particle protein [Streptococcus mutans NFSM2]
gi|450081930|ref|ZP_21852033.1| signal recognition particle protein [Streptococcus mutans N66]
gi|26007034|sp|Q54431.3|SRP54_STRMU RecName: Full=Signal recognition particle protein; AltName:
Full=Fifty-four homolog
gi|24377436|gb|AAN58758.1|AE014944_8 signal recognition particle protein subunit, Ffh [Streptococcus
mutans UA159]
gi|449156378|gb|EMB59847.1| signal recognition particle protein [Streptococcus mutans 8ID3]
gi|449179745|gb|EMB81936.1| signal recognition particle protein [Streptococcus mutans NFSM2]
gi|449214694|gb|EMC14933.1| signal recognition particle protein [Streptococcus mutans N66]
gi|449264947|gb|EMC62280.1| signal recognition particle protein [Streptococcus mutans U2B]
Length = 516
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 170/353 (48%), Positives = 243/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
+FDFNDF++Q V MGSM ++ MIPGM P A V+ E + A++ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVQNMGSMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|386586085|ref|YP_006082487.1| signal recognition particle protein [Streptococcus suis D12]
gi|353738231|gb|AER19239.1| signal recognition particle protein [Streptococcus suis D12]
Length = 524
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 169/352 (48%), Positives = 244/352 (69%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G E SE++ + PT+I++AGLQG GKTT + KLAN LK++ + +L+A D+YRPAAI
Sbjct: 87 LGSETSEIIKSPKIPTIIMMAGLQGAGKTTFTGKLANKLKQEENARPLLIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ G +V +I +QGLE+AK + D V++DTAGRLQID+A+M EL
Sbjct: 147 DQLKTLGQQIDVPVFELGNQVPALEIVRQGLEQAKANHNDYVLIDTAGRLQIDQALMAEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+++K P E+LLVVDAM GQEAA + FN ++ ITG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 REIKEFAQPNEILLVVDAMIGQEAANVAREFNDQLAITGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G+PIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGQPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASKEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF+ Q V MG M ++ MIPGM G A ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAGNPALANLKVDEREIARKRAIVSSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 387 ERENPDLL--TPSRRRRIANGSGNSFVEVNKFIKDFNQAKTMMQ---GVMSG 433
>gi|387786156|ref|YP_006251252.1| signal recognition particle protein subunit Ffh [Streptococcus
mutans LJ23]
gi|449908233|ref|ZP_21793580.1| signal recognition particle protein [Streptococcus mutans OMZ175]
gi|379132557|dbj|BAL69309.1| signal recognition particle protein subunit Ffh [Streptococcus
mutans LJ23]
gi|449263047|gb|EMC60481.1| signal recognition particle protein [Streptococcus mutans OMZ175]
Length = 516
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 168/352 (47%), Positives = 242/352 (68%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
+FDFNDF++Q V MG M ++ MIPGM + A V+ E + A++ +MTPE
Sbjct: 327 NSFDFNDFIEQLDQVQNMGPMEDILKMIPGMANNSALANVKVNEDEIARKRAIVSSMTPE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 387 ERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|449899617|ref|ZP_21791113.1| signal recognition particle protein [Streptococcus mutans R221]
gi|449258112|gb|EMC55708.1| signal recognition particle protein [Streptococcus mutans R221]
Length = 516
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 170/353 (48%), Positives = 243/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
+FDFNDF++Q V MGSM ++ MIPGM P A V+ E + A++ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVQNMGSMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|408789950|ref|ZP_11201587.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
florum 2F]
gi|408520791|gb|EKK20821.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
florum 2F]
Length = 479
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 179/356 (50%), Positives = 245/356 (68%), Gaps = 10/356 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MGG +EL A PT++++AGLQG GKTT KLA LK++ ++ +L+A DVYRPAAI
Sbjct: 87 MGGATTELTTAPKIPTIVMMAGLQGAGKTTTVGKLARKLKQEKQARPLLIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G Q+ VPV+ GT+V P QIA G++ A+ + D V +DTAGRLQID ++MDEL
Sbjct: 147 EQLQQVGAQIDVPVFAEGTDVDPVQIAIDGVKAAQANHNDYVFIDTAGRLQIDDSLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K ++PT+ LLVVDAMTGQ A FN + ITG ILTKLDGD+RGGAALS+K V
Sbjct: 207 KKIKAAVHPTDTLLVVDAMTGQNAVQTAEGFNDALDITGVILTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPI G+GE++ DL+ F+PDRMA RILGMGDVLS VEK Q+ + ++ A ++ +KI
Sbjct: 267 TGKPILYTGQGEKLADLDVFHPDRMASRILGMGDVLSLVEKTQQTIDEKKARQLNEKIKE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
+FDF+DF+ Q + RMGS+ +IGMIPGM PA V L ++A+I +MT
Sbjct: 327 NSFDFDDFVDQLEQLQRMGSIKDLIGMIPGMAN-NPALKNVDMDPHELDKIKAIIYSMTN 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL----MGVME 349
+ERE P+LL +P RR+R+A+ S + Q V++L+ Q +M+ M + MG ME
Sbjct: 386 QERENPDLL--NPSRRRRIARGSAQPIQTVNRLIKQFNEMKKMMNQVSNGNMGGME 439
>gi|377831263|ref|ZP_09814244.1| sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus mucosae LM1]
gi|377554941|gb|EHT16639.1| sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus mucosae LM1]
Length = 483
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 175/354 (49%), Positives = 241/354 (68%), Gaps = 6/354 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L A PTVI++ GLQG GKTT + KLA LK + + M +A DVYRPAAI
Sbjct: 87 MGEEAVPLNKAPHIPTVIMMVGLQGAGKTTTAGKLALRLKNEENARPMFIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL + +Q+GVPV+ GTE P I + G+E+AK+ + D VI+DTAGRLQID+ +MDEL
Sbjct: 147 TQLQQVADQIGVPVFEEGTEKDPVDIVRDGMEQAKQNHNDYVIIDTAGRLQIDEQLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++K + P E+LLVVDAMTGQ A FN ++ ITG +LTKLDGD+RGGAA+S++ V
Sbjct: 207 VNIKNLTQPNEILLVVDAMTGQNAVKTAQGFNDKLDITGVVLTKLDGDTRGGAAMSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG GE+MEDL+ F+PDRMA RILGMGD+++ +EKAQ+ +E A+E K+ +
Sbjct: 267 TGKPIKFVGEGEKMEDLDVFHPDRMASRILGMGDMMTLIEKAQKNFDEEKAQETMDKMRA 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FD+NDFL+Q V +MG + ++ M+PGM PA + K ++A+I +MTP
Sbjct: 327 NEFDYNDFLEQMDQVTKMGPLENILKMMPGMAN-NPALKNINIDPKQFAHIKAIILSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 351
EERE P+L+ +P RR+R+A SG+ +V++++ Q QMR MK + GG
Sbjct: 386 EERENPDLM--NPSRRRRLAAGSGRPIVEVNRMIKQFNQMRKMMKQVTNGNFGG 437
>gi|223932139|ref|ZP_03624143.1| signal recognition particle protein [Streptococcus suis 89/1591]
gi|302023761|ref|ZP_07248972.1| signal recognition particle protein [Streptococcus suis 05HAS68]
gi|330832793|ref|YP_004401618.1| signal recognition particle protein [Streptococcus suis ST3]
gi|386584059|ref|YP_006080462.1| signal recognition particle protein [Streptococcus suis D9]
gi|223899120|gb|EEF65477.1| signal recognition particle protein [Streptococcus suis 89/1591]
gi|329307016|gb|AEB81432.1| signal recognition particle protein [Streptococcus suis ST3]
gi|353736205|gb|AER17214.1| signal recognition particle protein [Streptococcus suis D9]
Length = 524
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 169/352 (48%), Positives = 244/352 (69%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G E SE++ + PT+I++AGLQG GKTT + KLAN LK++ + +L+A D+YRPAAI
Sbjct: 87 LGSETSEIIKSPKIPTIIMMAGLQGAGKTTFTGKLANKLKQEENARPLLIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ G +V +I +QGLE+AK + D V++DTAGRLQID+A+M EL
Sbjct: 147 DQLKTLGQQIDVPVFELGNQVPALEIVRQGLEQAKANHNDYVLIDTAGRLQIDQALMAEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+++K P E+LLVVDAM GQEAA + FN ++ ITG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 REIKEFAQPNEILLVVDAMIGQEAANVAREFNDQLAITGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G+PIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGQPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASKEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF+ Q V MG M ++ MIPGM G A ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAGNPALANLKVDEREIARKRAIVSSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 387 ERENPDLL--TPSRRRRIANGSGNSFVEVNKFIKDFNQAKTMMQ---GVMSG 433
>gi|386830772|ref|YP_006237426.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|417797950|ref|ZP_12445136.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21310]
gi|334277072|gb|EGL95311.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21310]
gi|385196164|emb|CCG15785.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus HO 5096 0412]
Length = 455
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 167/346 (48%), Positives = 249/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI
Sbjct: 87 MGGENSSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 NQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K+VK + P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V
Sbjct: 207 KEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|209360587|gb|ACI42964.1| signal recognition particle protein [Lactobacillus casei]
Length = 478
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 175/361 (48%), Positives = 248/361 (68%), Gaps = 8/361 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG L A PTVI++AGLQGVGKTT KL+ YL + +L+A DVYRPAAI
Sbjct: 87 MGEAAVPLNKAPHIPTVIMMAGLQGVGKTTTVGKLSKYLMDNDSARPLLIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ VPV+ GT+V P +I +QGL AK+ D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLQTIGKQLNVPVFEMGTDVDPVEIVRQGLATAKENKNDYVLIDTAGRLQIDEKLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K++K + +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KNIKELAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A EM +KI
Sbjct: 267 TGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKNYDEKQAMEMAEKIRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
+FDFNDFL Q +++MG + ++ MIPGM A V+ K + M+A++ +MTP+
Sbjct: 327 NSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVYSMTPQ 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSN 358
ER P+LL +P RR+R+A SG+ +V++++ Q Q K +M M G++ L
Sbjct: 387 ERGDPDLL--NPSRRRRLAAGSGRPVVEVNRMIKQFNQ----SKQMMNQMSKGNMKGLDG 440
Query: 359 L 359
L
Sbjct: 441 L 441
>gi|365925209|ref|ZP_09447972.1| signal recognition particle protein [Lactobacillus mali KCTC 3596 =
DSM 20444]
gi|420266516|ref|ZP_14768978.1| signal recognition particle protein [Lactobacillus mali KCTC 3596 =
DSM 20444]
gi|394425212|gb|EJE98212.1| signal recognition particle protein [Lactobacillus mali KCTC 3596 =
DSM 20444]
Length = 477
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 171/362 (47%), Positives = 249/362 (68%), Gaps = 10/362 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E EL + PT+I++ GLQG GKTT KLA LK + + +++A D+YRPAAI
Sbjct: 87 MGEEAVELNKSDKIPTIIMMVGLQGAGKTTTLGKLALKLKNEKNARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ILG+ + VPV++ GT+V P +I ++GLE A +K D V++DTAGRLQID+ +MDEL
Sbjct: 147 DQLEILGKSIDVPVFSMGTDVSPVEIVRKGLELAAEKKNDYVLIDTAGRLQIDELLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K + P E+LL VDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAALS++ V
Sbjct: 207 AQIKTLAQPDEILLTVDAMTGQNAVEVAKGFNEQLDVTGVVLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK +G+GE+M DL+ FYPDRM+ RILGMGD+L+ +EKAQ+ ++ A++MQ+K+
Sbjct: 267 TGKPIKFIGQGEKMTDLDVFYPDRMSSRILGMGDMLTLIEKAQQDFDEKKAQQMQEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
+FDFNDF+ Q V +MG M +I MIPGM PA ++ K + ++A++ +MT
Sbjct: 327 NSFDFNDFIDQMEQVQKMGPMEDIIKMIPGMAN-NPAIKNLKVNPKDIDHLKAVVYSMTN 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
EERE P+L +P RR+R+A SG+ +V++++ Q + MK +MG + G+ +
Sbjct: 386 EERENPDLF--NPSRRRRIAAGSGRPIHEVNRMIKQFNE----MKKMMGKVSKGNFEGME 439
Query: 358 NL 359
+
Sbjct: 440 GM 441
>gi|422858480|ref|ZP_16905130.1| signal recognition particle protein [Streptococcus sanguinis
SK1057]
gi|327460366|gb|EGF06703.1| signal recognition particle protein [Streptococcus sanguinis
SK1057]
Length = 524
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 170/353 (48%), Positives = 244/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARLLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE+ +I +QGLE+AK + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEIPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 SDVKALANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 386 AERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|421186068|ref|ZP_15643463.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB418]
gi|399967712|gb|EJO02178.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB418]
Length = 507
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 242/366 (66%), Gaps = 10/366 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG + L + PTVI++AGLQG GKTT AKLAN LK + + +L+A DVYRPAAI
Sbjct: 87 MGEKAVPLNKSSKIPTVIMMAGLQGAGKTTTVAKLANRLKDENHARPLLIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL LG+Q+ +PV+ G P +I + GL++A++ D V +DTAGRLQID+ +M EL
Sbjct: 147 EQLKSLGDQLSIPVFDEGVGENPRKIIEDGLKQARENKNDYVFIDTAGRLQIDQVLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
KD++++ P E+LL VDAMTGQ A FN +GITG +LTKLDGD+RGGAALS++EV
Sbjct: 207 KDIEKMAEPDEILLTVDAMTGQNATETARGFNDALGITGVVLTKLDGDTRGGAALSIREV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG GE++ DL+ FYPDRMA RILGMGDVLS +EK Q+ ++ A E +K+
Sbjct: 267 TGKPIKFVGEGEKVTDLDVFYPDRMASRILGMGDVLSLIEKTQKDFDEKQASEQLQKLQE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
FDFNDFL+Q + + MG M ++ MIPGM P AQ + K MEA++ +MTP
Sbjct: 327 NTFDFNDFLEQLKQIQNMGPMEDMLKMIPGMAN-NPAMAQAQIGPKDFSHMEAIVYSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
ER PELL +P RR+R+A SG+ V++L+ Q QMR M G LPA
Sbjct: 386 GERVDPELL--TPARRRRIAAGSGRPVVDVNRLIKQFKQMRQMMYKFTN--GKGGLPA-- 439
Query: 358 NLEDAL 363
+ED L
Sbjct: 440 GMEDML 445
>gi|422854257|ref|ZP_16900921.1| signal recognition particle protein [Streptococcus sanguinis SK160]
gi|325696493|gb|EGD38383.1| signal recognition particle protein [Streptococcus sanguinis SK160]
Length = 524
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 244/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEDNARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 SDVKALANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 386 AERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|297584012|ref|YP_003699792.1| signal recognition particle protein [Bacillus selenitireducens
MLS10]
gi|297142469|gb|ADH99226.1| signal recognition particle protein [Bacillus selenitireducens
MLS10]
Length = 449
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/349 (48%), Positives = 252/349 (72%), Gaps = 4/349 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTV+++ GLQG GKTT + KLANYL+K + +LVA D+YRPAAI
Sbjct: 87 MGGEQSKINTASKPPTVVMMVGLQGAGKTTTTGKLANYLRKNHNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IA++ +E AK+++ D V++DTAGRL ID +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIARKAVEHAKEEHHDYVLIDTAGRLHIDNELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ VK + P EVLLVVDAMTGQ+A + +FN ++ ++G +LTKLDGD+RGGAA+SVK V
Sbjct: 207 QQVKAEVKPDEVLLVVDAMTGQDAVNVAESFNEQLELSGVVLTKLDGDTRGGAAISVKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ LEPF+P+RMA RILGMGDVLS +EKAQ + ++ A E+++K+ +
Sbjct: 267 TDTPIKFAGMGEKIDQLEPFHPERMASRILGMGDVLSLIEKAQTGVDEDKARELERKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+ F+DFL+Q V MG + ++ M+PG GK+ + V+ +K L +EA++++MT
Sbjct: 327 NDLSFDDFLEQLAQVKEMGPLDEILNMMPGAGKMKGLKNVQVDDKQLAHIEAIVKSMTKY 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
ERE P ++ S R+KR+A+ SG++ Q+V++L+ Q +M+ MK + G+
Sbjct: 387 ERENPSVMNAS--RKKRIAKGSGRSIQEVNRLLKQFEEMKKMMKQMTGM 433
>gi|421190065|ref|ZP_15647369.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB422]
gi|421192045|ref|ZP_15649314.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB548]
gi|399969992|gb|EJO04298.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB548]
gi|399970865|gb|EJO05155.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB422]
Length = 507
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 242/366 (66%), Gaps = 10/366 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG + L + PTVI++AGLQG GKTT AKLAN LK + + +L+A DVYRPAAI
Sbjct: 87 MGEKAVPLNKSSKIPTVIMMAGLQGAGKTTTVAKLANRLKDENHARPLLIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL LG+Q+ +PV+ G P +I + GL++A++ D V +DTAGRLQID+ +M EL
Sbjct: 147 EQLKSLGDQLSIPVFDEGVGENPRKIVEDGLKQARENKNDYVFIDTAGRLQIDQVLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
KD++++ P E+LL VDAMTGQ A FN +GITG +LTKLDGD+RGGAALS++EV
Sbjct: 207 KDIEKMAEPDEILLTVDAMTGQNATETARGFNDALGITGVVLTKLDGDTRGGAALSIREV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG GE++ DL+ FYPDRMA RILGMGDVLS +EK Q+ ++ A E +K+
Sbjct: 267 TGKPIKFVGEGEKVTDLDVFYPDRMASRILGMGDVLSLIEKTQKDFDEKQASEQLQKLQE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
FDFNDFL+Q + + MG M ++ MIPGM P AQ + K MEA++ +MTP
Sbjct: 327 NTFDFNDFLEQLKQIQNMGPMEDMLKMIPGMAN-NPAMAQAQIGPKDFSHMEAIVYSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
ER PELL +P RR+R+A SG+ V++L+ Q QMR M G LPA
Sbjct: 386 GERVDPELL--TPARRRRIAAGSGRPVVDVNRLIKQFKQMRQMMYKFTN--GKGGLPA-- 439
Query: 358 NLEDAL 363
+ED L
Sbjct: 440 GMEDML 445
>gi|149019283|ref|ZP_01834645.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP23-BS72]
gi|418103002|ref|ZP_12740076.1| signal recognition particle protein [Streptococcus pneumoniae
NP070]
gi|419475661|ref|ZP_14015501.1| signal recognition particle protein [Streptococcus pneumoniae
GA14688]
gi|419486818|ref|ZP_14026582.1| signal recognition particle protein [Streptococcus pneumoniae
GA44128]
gi|421209124|ref|ZP_15666138.1| signal recognition particle protein [Streptococcus pneumoniae
2070005]
gi|421225165|ref|ZP_15681904.1| signal recognition particle protein [Streptococcus pneumoniae
2070768]
gi|421240816|ref|ZP_15697361.1| signal recognition particle protein [Streptococcus pneumoniae
2080913]
gi|147931153|gb|EDK82132.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP23-BS72]
gi|353775635|gb|EHD56115.1| signal recognition particle protein [Streptococcus pneumoniae
NP070]
gi|379561206|gb|EHZ26227.1| signal recognition particle protein [Streptococcus pneumoniae
GA14688]
gi|379586527|gb|EHZ51378.1| signal recognition particle protein [Streptococcus pneumoniae
GA44128]
gi|395573833|gb|EJG34419.1| signal recognition particle protein [Streptococcus pneumoniae
2070005]
gi|395589217|gb|EJG49536.1| signal recognition particle protein [Streptococcus pneumoniae
2070768]
gi|395607194|gb|EJG67291.1| signal recognition particle protein [Streptococcus pneumoniae
2080913]
Length = 523
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 245/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YR AAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRLAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|404485667|ref|ZP_11020864.1| signal recognition particle protein [Barnesiella intestinihominis
YIT 11860]
gi|404338355|gb|EJZ64802.1| signal recognition particle protein [Barnesiella intestinihominis
YIT 11860]
Length = 440
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 174/343 (50%), Positives = 241/343 (70%), Gaps = 5/343 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE +E+ +++ P++IL++GLQG GKTT S KLA LK K+GK +LVA DVYRPAAI
Sbjct: 86 MGGETAEVNLSQN-PSIILMSGLQGSGKTTFSGKLAKMLKSKKGKRPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +LGEQ+ VPVYT P I+ ++ AK+ + D+VIVDTAGRL ID+ MM+E+
Sbjct: 145 EQLKVLGEQIDVPVYTEEDSKDPVSISANAVKYAKENHFDLVIVDTAGRLAIDEQMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K+ +NPTE L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 EAIKKKINPTETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE++E ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VDKPIKFVGTGEKLEAIDYFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP+E
Sbjct: 325 NQFDFNDFLSQIHQIKKMGNLKDLASMIPGVGKAIK-DMDIDDNAFKSIEAIIYSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
R PELL S RR+R+A SG + Q+V++L+ Q Q R M+
Sbjct: 384 RSNPELLNGS--RRQRIAAGSGTSIQEVNRLIKQFDQTRKMMR 424
>gi|450063749|ref|ZP_21845104.1| signal recognition particle protein [Streptococcus mutans NLML5]
gi|449204410|gb|EMC05207.1| signal recognition particle protein [Streptococcus mutans NLML5]
Length = 516
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 170/353 (48%), Positives = 243/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++AGLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMAGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
+FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|417093101|ref|ZP_11957490.1| signal recognition particle protein [Streptococcus suis R61]
gi|353531997|gb|EHC01674.1| signal recognition particle protein [Streptococcus suis R61]
Length = 524
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 169/352 (48%), Positives = 244/352 (69%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G E SE++ + PT+I++AGLQG GKTT + KLAN LK++ + +L+A D+YRPAAI
Sbjct: 87 LGSETSEIIKSPKIPTIIMMAGLQGAGKTTFTGKLANKLKQEENARPLLIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ G +V +I +QGLE+AK + D V++DTAGRLQID+A+M EL
Sbjct: 147 DQLKTLGQQIDVPVFELGNQVPALEIVRQGLEQAKANHNDYVLIDTAGRLQIDQALMAEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+++K P E+LLVVDAM GQEAA + FN ++ ITG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 REIKEFAQPNEILLVVDAMIGQEAANVAREFNDQLAITGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G+PIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGQPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASKEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF+ Q V MG M ++ MIPGM G A ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAGNPALANLKVDEREIARKRAIVSSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 387 ERENPDLL--TPSRRRRIANGSGNSFVEVNKFIKDFNQAKTMMQ---GVMSG 433
>gi|312143704|ref|YP_003995150.1| signal recognition particle protein [Halanaerobium
hydrogeniformans]
gi|311904355|gb|ADQ14796.1| signal recognition particle protein [Halanaerobium
hydrogeniformans]
Length = 445
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 173/347 (49%), Positives = 239/347 (68%), Gaps = 7/347 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG E+ + PT+I++ GLQG GKTT + KLA L +GK+ +LVA DVYRPAAI
Sbjct: 87 MGGSQEEINISPDPPTIIMMVGLQGSGKTTSAGKLARMLSNKGKNPLLVAADVYRPAAIR 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGE++ +PV++ G + P IAK + A N D +I+DTAGRL ID+ MM+EL+
Sbjct: 147 QLQVLGERLDLPVFSMGEDSDPVDIAKGSINFASTHNCDTIILDTAGRLHIDQEMMEELE 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K ++P E+LLVVDAMTGQ+A + F+ + I G +LTK+DGD+RGGAALS+KE++
Sbjct: 207 GIKGAVDPDEILLVVDAMTGQDAVNVAQNFDKRLDIDGILLTKMDGDARGGAALSIKEIT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK G GE++ DLEPF+PDRMA RILGMGDVL +EKA++ + +E A+ +++KI
Sbjct: 267 GKPIKFAGTGEKLADLEPFHPDRMASRILGMGDVLGLIEKAEKSIDKEKAKALEEKIRKN 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG---KITPAQVREAEKSLKIMEAMIEAMTP 297
F DF++Q V MG M ++GMIPGMG ++ QV +K L +EA+I +MTP
Sbjct: 327 EFTLEDFMEQMSQVRNMGPMDELLGMIPGMGGAKQLKNLQV--DDKQLDHIEAIISSMTP 384
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
EER KP+++ S RRKR+AQ SG Q V++L+ Q Q + MK L
Sbjct: 385 EERRKPDIINGS--RRKRIAQGSGTKIQDVNRLLKQFRQTKKMMKKL 429
>gi|449931990|ref|ZP_21802581.1| signal recognition particle protein [Streptococcus mutans 3SN1]
gi|449161857|gb|EMB65027.1| signal recognition particle protein [Streptococcus mutans 3SN1]
Length = 516
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 170/353 (48%), Positives = 242/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQIKVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
+FDFNDF+KQ V MG M ++ MIPGM P A V+ E + A++ +MTP
Sbjct: 327 NSFDFNDFIKQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEDEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|418655398|ref|ZP_13217261.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-105]
gi|375037268|gb|EHS30313.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-105]
Length = 455
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 167/346 (48%), Positives = 249/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI
Sbjct: 87 MGGENSSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 NQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K+VK + P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V
Sbjct: 207 KEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERNNPDTLNIS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|379795602|ref|YP_005325600.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MSHR1132]
gi|356872592|emb|CCE58931.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MSHR1132]
Length = 455
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 166/346 (47%), Positives = 248/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI
Sbjct: 87 MGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ +PVY+ G +VKP QI L+ AK +++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 NQLQTVGKQIDIPVYSEGDQVKPQQIVTNALQHAKDEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K+VK + P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V
Sbjct: 207 KEVKEIAKPNEIMLVVDSMTGQDAVNVAESFDNQLDVTGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|422860148|ref|ZP_16906792.1| signal recognition particle protein [Streptococcus sanguinis SK330]
gi|327470046|gb|EGF15510.1| signal recognition particle protein [Streptococcus sanguinis SK330]
Length = 524
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 244/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 SDVKSLANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 386 AERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|422884204|ref|ZP_16930653.1| signal recognition particle protein [Streptococcus sanguinis SK49]
gi|332360637|gb|EGJ38446.1| signal recognition particle protein [Streptococcus sanguinis SK49]
Length = 524
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 244/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 SDVKTLANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 386 AERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|403745347|ref|ZP_10954285.1| signal recognition particle protein [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121575|gb|EJY55868.1| signal recognition particle protein [Alicyclobacillus hesperidum
URH17-3-68]
Length = 467
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 171/348 (49%), Positives = 240/348 (68%), Gaps = 3/348 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG + + A PTV++L GLQG GKTT AKL ++ +LVA DVYRPAAID
Sbjct: 65 MGGAQARIQMAPKPPTVVMLVGLQGAGKTTAIAKLGLAFRQHQHRPLLVAADVYRPAAID 124
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+Q+ +PV+ G + P IAK L EA+K D+V++DTAGRL ID +M+EL+
Sbjct: 125 QLKVLGKQIDIPVFDQGADANPVAIAKASLAEAEKAGADIVLIDTAGRLHIDDQLMEELE 184
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + PTE+LLVVDAMTGQ+A + TF+ +G+TG ILTKLDGD+RGGAAL+V+ V+
Sbjct: 185 GMKAAVQPTEILLVVDAMTGQDAVHVAETFHQRLGVTGVILTKLDGDARGGAALTVRAVT 244
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE++E LEPF+PDR+A RILGMGDVLS +E+AQE + E A+EM+ ++ ++
Sbjct: 245 GCPIKYVGLGEKIEPLEPFHPDRLASRILGMGDVLSLIERAQERIDLEKAKEMEARMRTS 304
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEE 299
+F NDF + R V +G + +V+ MIPGM ++ + + ++ M+A+I +MTP E
Sbjct: 305 SFTLNDFQEMFRQVRNLGPLDQVLKMIPGMNRMKGLENIDLNDRRFLRMDAIISSMTPAE 364
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
RE P ++ S RR+R+A SG T ++V+QL+ Q Q R MK G+
Sbjct: 365 REDPSVMNAS--RRRRIANGSGTTVREVNQLLNQFEQTREMMKRFTGM 410
>gi|345884305|ref|ZP_08835714.1| signal recognition particle protein [Prevotella sp. C561]
gi|345042866|gb|EGW46957.1| signal recognition particle protein [Prevotella sp. C561]
Length = 515
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 178/347 (51%), Positives = 240/347 (69%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE L + RP++IL++GLQG GKTT S KLAN LK K+ K+ +LVA DVYRPAAI
Sbjct: 151 MGGEAVGLNLS-GRPSIILMSGLQGSGKTTFSGKLANMLKTKEHKNPLLVACDVYRPAAI 209
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ++GEQVGV VY+ ++IA L EAK K DVVI+DTAGRL +D+ MM+E+
Sbjct: 210 DQLKVVGEQVGVAVYSEPENKNVNEIADHALAEAKAKGNDVVIIDTAGRLAVDEEMMNEI 269
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K ++P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 270 ESLKNHVHPDETLFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAALSIRTV 329
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A+ +QKKI
Sbjct: 330 VTKPIKFIGTGEKMEAIDVFHPGRMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQK 389
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP+E
Sbjct: 390 NQFDFNDFYNQIQQIKKMGNLKDLASMIPGVGK-AIRDVDIDDNAFKGIEAIIQSMTPKE 448
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R PELL S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 449 RTNPELLNNS--RRQRIAKGSGTNIQEVNRLIKQFDQTRKMMKMVTG 493
>gi|422862537|ref|ZP_16909169.1| signal recognition particle protein [Streptococcus sanguinis SK408]
gi|327474237|gb|EGF19644.1| signal recognition particle protein [Streptococcus sanguinis SK408]
Length = 524
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 244/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 SDVKALANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 386 AERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|228474956|ref|ZP_04059684.1| signal recognition particle protein [Staphylococcus hominis SK119]
gi|314936601|ref|ZP_07843948.1| signal recognition particle protein [Staphylococcus hominis subsp.
hominis C80]
gi|418620446|ref|ZP_13183250.1| signal recognition particle protein [Staphylococcus hominis VCU122]
gi|228270941|gb|EEK12329.1| signal recognition particle protein [Staphylococcus hominis SK119]
gi|313655220|gb|EFS18965.1| signal recognition particle protein [Staphylococcus hominis subsp.
hominis C80]
gi|374822576|gb|EHR86596.1| signal recognition particle protein [Staphylococcus hominis VCU122]
Length = 456
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 174/366 (47%), Positives = 255/366 (69%), Gaps = 4/366 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + A PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI
Sbjct: 87 MGGENTSIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ VPVY+ G +VKP QI L AK++++D VI+DTAGRL ID+ +M+EL
Sbjct: 147 NQLQTVGKQLDVPVYSEGDQVKPQQIVDNALRYAKEEHLDFVIIDTAGRLHIDETLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + P E++LVVDAMTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V
Sbjct: 207 ADVKEISKPDEIMLVVDAMTGQDAVNVAQSFDEQLDVTGVTLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+M+ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 THKPIKFVGMSEKMDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ ++K + ++A+I++MTP
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPN 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSN 358
ER+ P +L S R+KR+A+ SG++ Q+V++L+ Q M+ MK G G S
Sbjct: 387 ERQDPAILNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQFTGNGRKGKKGKRSQ 444
Query: 359 LEDALK 364
+E+ LK
Sbjct: 445 MENMLK 450
>gi|323351581|ref|ZP_08087235.1| signal recognition particle protein [Streptococcus sanguinis VMC66]
gi|322122067|gb|EFX93793.1| signal recognition particle protein [Streptococcus sanguinis VMC66]
Length = 524
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 244/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 SDVKALANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 386 AERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|302392419|ref|YP_003828239.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Acetohalobium arabaticum DSM 5501]
gi|302204496|gb|ADL13174.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Acetohalobium arabaticum DSM 5501]
Length = 453
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 176/345 (51%), Positives = 240/345 (69%), Gaps = 3/345 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S+L A PTVI+L GLQG GKTT KLA +L K G+ +LVAGDVYRPAAI
Sbjct: 87 MGGTQSKLSIASDPPTVIMLVGLQGAGKTTTVGKLAKHLHKNGRRPLLVAGDVYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGE++ PV++ G + P IAK G+ A+ DVVI+DTAGRL ID+ +M ELK
Sbjct: 147 QLQVLGERLDQPVFSMGDKQDPVDIAKAGVSHAESNGRDVVIIDTAGRLHIDEELMGELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K +NP E+LLVVDAMTGQ+A + +F+ +G+ G LTKLDGD+RGGAALS+++V+
Sbjct: 207 DIKAAVNPQEILLVVDAMTGQDAVNVAESFDDALGVDGITLTKLDGDARGGAALSIRKVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE+++DLEPF+PDRMA RILGMGD+LS +EKA+E + E A+E+++K+
Sbjct: 267 GRPIKFVGTGEKLDDLEPFHPDRMASRILGMGDMLSLIEKAEENIDAEKAKELEEKLRKE 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEE 299
F +DFL Q + MG + +++ MIPGMGKI + E+ L +EA+I +MT EE
Sbjct: 327 EFTLDDFLDQMSQIRNMGPLDQIMDMIPGMGKIKQLDNLDMGEEHLDQIEAIISSMTTEE 386
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+ P ++ S RR+R+A SG Q V++L+ Q Q + MK L
Sbjct: 387 KRDPSIINGS--RRRRIANGSGTEVQDVNRLLKQFKQAQKMMKQL 429
>gi|297617092|ref|YP_003702251.1| signal recognition particle protein [Syntrophothermus lipocalidus
DSM 12680]
gi|297144929|gb|ADI01686.1| signal recognition particle protein [Syntrophothermus lipocalidus
DSM 12680]
Length = 447
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 174/338 (51%), Positives = 233/338 (68%), Gaps = 7/338 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG+ ++L A PTV+++ GLQG GKTT AKLA L QG+ +LVA D+YRPAAI
Sbjct: 87 MGGDQTKLNLAAKPPTVVMMVGLQGTGKTTTCAKLARSLLAQGRRPLLVAADIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGE+ PV++ G E P IA+ LE A+ D+VI+DTAGRL I++ +M+ELK
Sbjct: 147 QLQVLGEKCNCPVFSMGQE-NPVNIARAALEYARSNGRDIVILDTAGRLHINEELMNELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K LNP E+LLVVDAMTGQ+A + ++FN ++G+TG +LTKLDGD+RGGAALSVK V+
Sbjct: 206 DLKSSLNPHEILLVVDAMTGQDAVNVASSFNEQLGLTGVVLTKLDGDTRGGAALSVKAVA 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK G GE++EDLEPFYP+RMA RILGMGDV S VEKAQ + ++ A E+ KKI
Sbjct: 266 GCPIKFAGVGEKLEDLEPFYPNRMASRILGMGDVQSLVEKAQASIDEKKARELGKKIRQQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA----EKSLKIMEAMIEAMT 296
F DFL Q + V MG + ++ MIPG G + + + EK + +EA+I++MT
Sbjct: 326 EFTLEDFLDQIQQVRSMGPLEDLLAMIPGFGNLKQLKGFKTADIDEKEISRIEAIIKSMT 385
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
PEER P +L S R+KR+A+ SG Q V++L+
Sbjct: 386 PEERLNPTMLNSS--RKKRIAKGSGTRVQDVNRLLKHF 421
>gi|422821249|ref|ZP_16869442.1| signal recognition particle protein [Streptococcus sanguinis SK353]
gi|324991163|gb|EGC23097.1| signal recognition particle protein [Streptococcus sanguinis SK353]
Length = 524
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 244/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 SDVKALANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NPAFKNIKVDEKEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 386 AERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|422848695|ref|ZP_16895371.1| signal recognition particle protein [Streptococcus sanguinis SK115]
gi|325689716|gb|EGD31720.1| signal recognition particle protein [Streptococcus sanguinis SK115]
Length = 524
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 244/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 SDVKALANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 386 AERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|343525152|ref|ZP_08762108.1| signal recognition particle protein [Streptococcus constellatus
subsp. pharyngis SK1060 = CCUG 46377]
gi|343397024|gb|EGV09560.1| signal recognition particle protein [Streptococcus constellatus
subsp. pharyngis SK1060 = CCUG 46377]
Length = 524
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 173/355 (48%), Positives = 246/355 (69%), Gaps = 13/355 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEAARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV++ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFSLGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAM 295
FDFNDF+ Q V MG M ++ MIPGM PA +V E E + K A++ +M
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPAMKNFKVDENEIARK--RAIVSSM 383
Query: 296 TPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
TP ERE P LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 384 TPAERENPNLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSVMQ---GVMSG 433
>gi|422870940|ref|ZP_16917433.1| signal recognition particle protein [Streptococcus sanguinis
SK1087]
gi|328946321|gb|EGG40465.1| signal recognition particle protein [Streptococcus sanguinis
SK1087]
Length = 524
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 244/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 SDVKALANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 386 AERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|253731855|ref|ZP_04866020.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|253724407|gb|EES93136.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus USA300_TCH959]
Length = 455
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 166/346 (47%), Positives = 249/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI
Sbjct: 87 MGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 NQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K+VK + P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V
Sbjct: 207 KEVKEIAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|227530556|ref|ZP_03960605.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus vaginalis
ATCC 49540]
gi|227349562|gb|EEJ39853.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus vaginalis
ATCC 49540]
Length = 484
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 173/362 (47%), Positives = 246/362 (67%), Gaps = 10/362 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L + PTVI++ GLQG GKTT + KLA LK + K+ + +A DVYRPAAI
Sbjct: 87 MGEEAVPLNKSSHIPTVIMMVGLQGAGKTTTAGKLALRLKNEDKARPLFIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL + +Q+ VPV+ GT+V P +I +QG+E AK+ + D VI+DTAGRLQID+ +MDEL
Sbjct: 147 TQLKQVADQIDVPVFEKGTDVDPVEIVRQGMEVAKQNHNDYVIIDTAGRLQIDEQLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++K+++NP E+LLV+D+MTGQ A F+ ++ ITG +LTKLDGD+RGGAA+S++ V
Sbjct: 207 ANIKQLVNPDEILLVIDSMTGQNAVNTAQGFDDKLDITGVVLTKLDGDTRGGAAMSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG GE+MEDL+ F+PDRMA RILGMGD+++ +EKAQ+ +E A+ K+
Sbjct: 267 TGKPIKFVGEGEKMEDLDVFHPDRMASRILGMGDMMTLIEKAQKDFDEEQAQATMDKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDFL Q V +MG + +I M+PGM PA + K L + A+I +MTP
Sbjct: 327 NTFDFNDFLSQMDQVTKMGPLENIIKMMPGMAN-NPALKNLNLDPKQLDHIRAIIYSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
EERE P+L+ +P RR+R+A +G+ +V++++ Q QMR MK + G+ +
Sbjct: 386 EERENPDLM--NPSRRRRLAAGAGRPIVEVNRMIKQFNQMRKMMKQV----TNGNFNGMQ 439
Query: 358 NL 359
N+
Sbjct: 440 NM 441
>gi|125717990|ref|YP_001035123.1| SRP54, signal recognition particle GTPase protein [Streptococcus
sanguinis SK36]
gi|125497907|gb|ABN44573.1| SRP54, signal recognition particle GTPase protein, putative
[Streptococcus sanguinis SK36]
Length = 524
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 244/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 SDVKALANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 386 AERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|298386283|ref|ZP_06995839.1| signal recognition particle protein [Bacteroides sp. 1_1_14]
gi|298260660|gb|EFI03528.1| signal recognition particle protein [Bacteroides sp. 1_1_14]
Length = 440
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 173/343 (50%), Positives = 237/343 (69%), Gaps = 5/343 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE E+ +SRP VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI
Sbjct: 86 MGGETVEINL-ESRPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +L EQ+ VP+Y+ P +IA+ ++EAK K D+VIVDTAGRL +D+ MM+E+
Sbjct: 145 EQLRVLAEQIEVPMYSELDSKNPVEIAQHAIQEAKAKGYDLVIVDTAGRLAVDEQMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K +NP E+L VVD+MTGQ+A FN+ + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 TAIKEAINPDEILFVVDSMTGQDAVNTAKEFNVRLDFNGVVLTKLDGDTRGGAALSIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP E
Sbjct: 325 NQFDFNDFLSQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPAE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
R PE+L S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 384 RSNPEILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|401682905|ref|ZP_10814794.1| signal recognition particle protein [Streptococcus sp. AS14]
gi|422851624|ref|ZP_16898294.1| signal recognition particle protein [Streptococcus sanguinis SK150]
gi|325694512|gb|EGD36421.1| signal recognition particle protein [Streptococcus sanguinis SK150]
gi|400183587|gb|EJO17838.1| signal recognition particle protein [Streptococcus sp. AS14]
Length = 524
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 244/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 SDVKALANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 386 AERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|377556838|ref|ZP_09786517.1| Signal recognition particle protein [Lactobacillus gastricus PS3]
gi|376167268|gb|EHS86121.1| Signal recognition particle protein [Lactobacillus gastricus PS3]
Length = 483
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 175/361 (48%), Positives = 248/361 (68%), Gaps = 10/361 (2%)
Query: 15 PTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPV 73
PTVI++ GLQG GKTT + KLA LK + K+ M +A D+YRPAAI QL + + + VPV
Sbjct: 101 PTVIMMVGLQGAGKTTTAGKLALRLKNEEKARPMFIAADIYRPAAITQLKQVADSIDVPV 160
Query: 74 YTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLL 133
+ GT+V P +I +QG+E AK+ + D VI+DTAGRLQID+A+MDEL ++K + +P E+LL
Sbjct: 161 FDLGTDVDPVEIVRQGMEVAKEHHNDYVIIDTAGRLQIDEALMDELANIKALAHPDEILL 220
Query: 134 VVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERM 193
VVDAMTGQ A F+ ++ ITG +LTKLDGD+RGGAA+S++ V+GKPIK VG GE+M
Sbjct: 221 VVDAMTGQNAVNTAEGFDEKLDITGVVLTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKM 280
Query: 194 EDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRT 253
E+L+ FYPDRM+ RILGMGD+L+ +EKAQ+ +E A E +K+ NFD+NDFL Q
Sbjct: 281 ENLDVFYPDRMSSRILGMGDMLTLIEKAQKNFDEEQAAETMRKMQENNFDYNDFLDQMDQ 340
Query: 254 VARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPV 311
V++MG + +I M+PGM PA + K ++A+I++MTPEERE P+L+ +P
Sbjct: 341 VSKMGPLEDLIKMMPGMAN-NPALKNINIDPKQFLHIKAIIQSMTPEERENPDLM--NPS 397
Query: 312 RRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAPP 371
RR+R+A SG+ +V++++ Q QMR MK + G+L + N+ L + P
Sbjct: 398 RRRRLAAGSGRPIVEVNRMIKQFDQMRKMMKQV----TNGNLNGMENMMGGLGNMPGMPG 453
Query: 372 G 372
G
Sbjct: 454 G 454
>gi|27467830|ref|NP_764467.1| ffh protein [Staphylococcus epidermidis ATCC 12228]
gi|251810667|ref|ZP_04825140.1| signal recognition particle protein Ffh [Staphylococcus epidermidis
BCM-HMP0060]
gi|282876331|ref|ZP_06285198.1| signal recognition particle protein [Staphylococcus epidermidis
SK135]
gi|293366798|ref|ZP_06613474.1| signal recognition particle protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417647383|ref|ZP_12297223.1| signal recognition particle protein [Staphylococcus epidermidis
VCU144]
gi|417656653|ref|ZP_12306336.1| signal recognition particle protein [Staphylococcus epidermidis
VCU028]
gi|417658957|ref|ZP_12308570.1| signal recognition particle protein [Staphylococcus epidermidis
VCU045]
gi|417909837|ref|ZP_12553570.1| signal recognition particle protein [Staphylococcus epidermidis
VCU037]
gi|417910876|ref|ZP_12554592.1| signal recognition particle protein [Staphylococcus epidermidis
VCU105]
gi|417913396|ref|ZP_12557063.1| signal recognition particle protein [Staphylococcus epidermidis
VCU109]
gi|418325071|ref|ZP_12936281.1| signal recognition particle protein [Staphylococcus epidermidis
VCU071]
gi|418411657|ref|ZP_12984923.1| signal recognition particle protein [Staphylococcus epidermidis
BVS058A4]
gi|418605396|ref|ZP_13168721.1| signal recognition particle protein [Staphylococcus epidermidis
VCU041]
gi|418606372|ref|ZP_13169653.1| signal recognition particle protein [Staphylococcus epidermidis
VCU057]
gi|418609835|ref|ZP_13172969.1| signal recognition particle protein [Staphylococcus epidermidis
VCU065]
gi|418616590|ref|ZP_13179514.1| signal recognition particle protein [Staphylococcus epidermidis
VCU120]
gi|418622035|ref|ZP_13184791.1| signal recognition particle protein [Staphylococcus epidermidis
VCU123]
gi|418624485|ref|ZP_13187160.1| signal recognition particle protein [Staphylococcus epidermidis
VCU125]
gi|418628905|ref|ZP_13191421.1| signal recognition particle protein [Staphylococcus epidermidis
VCU127]
gi|418664755|ref|ZP_13226221.1| signal recognition particle protein [Staphylococcus epidermidis
VCU081]
gi|419768646|ref|ZP_14294762.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-250]
gi|419772629|ref|ZP_14298660.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-K]
gi|420163425|ref|ZP_14670172.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM095]
gi|420165227|ref|ZP_14671931.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM088]
gi|420167593|ref|ZP_14674245.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM087]
gi|420169780|ref|ZP_14676358.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM070]
gi|420172763|ref|ZP_14679261.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM067]
gi|420182907|ref|ZP_14689040.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM049]
gi|420187558|ref|ZP_14693578.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM039]
gi|420194025|ref|ZP_14699854.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM021]
gi|420197128|ref|ZP_14702852.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM020]
gi|420202049|ref|ZP_14707644.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM018]
gi|420206443|ref|ZP_14711953.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM008]
gi|420209484|ref|ZP_14714921.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM003]
gi|420211872|ref|ZP_14717228.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM001]
gi|420214283|ref|ZP_14719562.1| signal recognition particle protein [Staphylococcus epidermidis
NIH05005]
gi|420216113|ref|ZP_14721335.1| signal recognition particle protein [Staphylococcus epidermidis
NIH05001]
gi|420220018|ref|ZP_14725008.1| signal recognition particle protein [Staphylococcus epidermidis
NIH04008]
gi|420221971|ref|ZP_14726896.1| signal recognition particle protein [Staphylococcus epidermidis
NIH08001]
gi|420224834|ref|ZP_14729672.1| signal recognition particle protein [Staphylococcus epidermidis
NIH06004]
gi|420227028|ref|ZP_14731801.1| signal recognition particle protein [Staphylococcus epidermidis
NIH05003]
gi|420229350|ref|ZP_14734056.1| signal recognition particle protein [Staphylococcus epidermidis
NIH04003]
gi|420231709|ref|ZP_14736354.1| signal recognition particle protein [Staphylococcus epidermidis
NIH051668]
gi|421607261|ref|ZP_16048507.1| signal recognition particle protein [Staphylococcus epidermidis
AU12-03]
gi|27315375|gb|AAO04509.1|AE016747_6 ffh protein [Staphylococcus epidermidis ATCC 12228]
gi|251805827|gb|EES58484.1| signal recognition particle protein Ffh [Staphylococcus epidermidis
BCM-HMP0060]
gi|281295356|gb|EFA87883.1| signal recognition particle protein [Staphylococcus epidermidis
SK135]
gi|291319099|gb|EFE59469.1| signal recognition particle protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329724304|gb|EGG60816.1| signal recognition particle protein [Staphylococcus epidermidis
VCU144]
gi|329736314|gb|EGG72586.1| signal recognition particle protein [Staphylococcus epidermidis
VCU028]
gi|329736596|gb|EGG72862.1| signal recognition particle protein [Staphylococcus epidermidis
VCU045]
gi|341652446|gb|EGS76234.1| signal recognition particle protein [Staphylococcus epidermidis
VCU037]
gi|341655064|gb|EGS78800.1| signal recognition particle protein [Staphylococcus epidermidis
VCU105]
gi|341655678|gb|EGS79402.1| signal recognition particle protein [Staphylococcus epidermidis
VCU109]
gi|365228977|gb|EHM70149.1| signal recognition particle protein [Staphylococcus epidermidis
VCU071]
gi|374402493|gb|EHQ73518.1| signal recognition particle protein [Staphylococcus epidermidis
VCU041]
gi|374406171|gb|EHQ77074.1| signal recognition particle protein [Staphylococcus epidermidis
VCU065]
gi|374408325|gb|EHQ79156.1| signal recognition particle protein [Staphylococcus epidermidis
VCU057]
gi|374410201|gb|EHQ80962.1| signal recognition particle protein [Staphylococcus epidermidis
VCU081]
gi|374820668|gb|EHR84744.1| signal recognition particle protein [Staphylococcus epidermidis
VCU120]
gi|374827410|gb|EHR91272.1| signal recognition particle protein [Staphylococcus epidermidis
VCU123]
gi|374827714|gb|EHR91575.1| signal recognition particle protein [Staphylococcus epidermidis
VCU125]
gi|374834899|gb|EHR98530.1| signal recognition particle protein [Staphylococcus epidermidis
VCU127]
gi|383359256|gb|EID36686.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-K]
gi|383359472|gb|EID36895.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-250]
gi|394235114|gb|EJD80688.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM095]
gi|394236394|gb|EJD81928.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM088]
gi|394237621|gb|EJD83107.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM087]
gi|394241440|gb|EJD86854.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM067]
gi|394243080|gb|EJD88454.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM070]
gi|394249370|gb|EJD94583.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM049]
gi|394256000|gb|EJE00936.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM039]
gi|394265935|gb|EJE10581.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM020]
gi|394266723|gb|EJE11348.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM021]
gi|394270022|gb|EJE14545.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM018]
gi|394278282|gb|EJE22599.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM008]
gi|394278931|gb|EJE23243.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM003]
gi|394280382|gb|EJE24663.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM001]
gi|394283648|gb|EJE27813.1| signal recognition particle protein [Staphylococcus epidermidis
NIH05005]
gi|394287025|gb|EJE30999.1| signal recognition particle protein [Staphylococcus epidermidis
NIH04008]
gi|394290002|gb|EJE33872.1| signal recognition particle protein [Staphylococcus epidermidis
NIH08001]
gi|394292563|gb|EJE36305.1| signal recognition particle protein [Staphylococcus epidermidis
NIH05001]
gi|394294237|gb|EJE37923.1| signal recognition particle protein [Staphylococcus epidermidis
NIH06004]
gi|394297529|gb|EJE41126.1| signal recognition particle protein [Staphylococcus epidermidis
NIH05003]
gi|394299116|gb|EJE42667.1| signal recognition particle protein [Staphylococcus epidermidis
NIH04003]
gi|394302251|gb|EJE45699.1| signal recognition particle protein [Staphylococcus epidermidis
NIH051668]
gi|406657053|gb|EKC83446.1| signal recognition particle protein [Staphylococcus epidermidis
AU12-03]
gi|410891240|gb|EKS39037.1| signal recognition particle protein [Staphylococcus epidermidis
BVS058A4]
Length = 455
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 166/346 (47%), Positives = 251/346 (72%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + A PTV+++ GLQG GKTT + KLA + KK K +LVAGD+YRPAAI
Sbjct: 87 MGGENTSIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPLLVAGDIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ +PVY+ G +V P QI + L+ AK++++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 DQLQTVGKQIDIPVYSEGDQVSPQQIVENALKHAKEEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++VK + P E++LVVDAMTGQ+A + +F+ ++ ++G LTKLDGD+RGGAALS++ V
Sbjct: 207 QEVKEISKPDEIMLVVDAMTGQDAVNVAQSFDEQLDVSGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ ++K + ++A+I++MTP+
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER PE L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERSNPETLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|422346384|ref|ZP_16427298.1| signal recognition particle protein [Clostridium perfringens
WAL-14572]
gi|373225929|gb|EHP48256.1| signal recognition particle protein [Clostridium perfringens
WAL-14572]
Length = 452
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 161/333 (48%), Positives = 247/333 (74%), Gaps = 2/333 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S+L ++ + PTV +L GLQG GKTT++ KLA +L+K+ K +LVA D+YRPAAI
Sbjct: 87 MGETESKLKYSDNGPTVFMLVGLQGAGKTTMAGKLALHLRKKNKKPLLVACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G+Q+ +PV++ G +VK IAK +E AK +VVI+DTAGRL ID+ +M ELK
Sbjct: 147 QLQVVGKQIDIPVFSMGDKVKAVDIAKAAIEHAKDNGNNVVIIDTAGRLHIDEDLMQELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
DVK V NP+E+LLVVDAMTGQ+A + TFN + ++G ILTKLDGD+RGGAALS+++++
Sbjct: 207 DVKEVSNPSEILLVVDAMTGQDAVNVAETFNNSLDLSGIILTKLDGDTRGGAALSIRDIT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK VG GE+M D+E F+PDRMA RILGMGDVLS +EKAQ+ + Q++A ++ +K+++
Sbjct: 267 SKPIKFVGVGEKMSDIEVFHPDRMASRILGMGDVLSLIEKAQQAIDQDEASKLSEKMLNQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPE 298
F+F+D+L + ++G ++++I MIPG+ ++ + EK + ++A+I++MT +
Sbjct: 327 EFNFDDYLSAMDQMKKLGPINKLIEMIPGVNTKELEGIDFSQGEKQMATVKAIIQSMTAK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 331
ER++P L+ + R++R+A+ SG T Q+V++++
Sbjct: 387 ERKQPSLVIGNGSRKRRIAKGSGTTVQEVNKVL 419
>gi|313674513|ref|YP_004052509.1| signal recognition particle subunit ffh/srp54 (srp54) [Marivirga
tractuosa DSM 4126]
gi|312941211|gb|ADR20401.1| signal recognition particle subunit FFH/SRP54 (srp54) [Marivirga
tractuosa DSM 4126]
Length = 443
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 174/347 (50%), Positives = 234/347 (67%), Gaps = 9/347 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
M GE + + P+ IL++GLQG GKTT S KLAN LKKQGK +L A D+YRPAAID
Sbjct: 85 MMGEKQVDISTEGSPSTILISGLQGSGKTTFSGKLANRLKKQGKQVLLAACDIYRPAAID 144
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+GV VY +IAK ++ AK +VIVDTAGRL +D+ MM E+
Sbjct: 145 QLKVLGEQIGVEVYAEPENKDAVKIAKNAIKFAKDNGKSIVIVDTAGRLAVDEVMMKEIS 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K+ LNP+E L VVD+MTGQ+A TFN ++ G +LTKLDGD+RGGAALS++ V
Sbjct: 205 SLKKELNPSETLFVVDSMTGQDAVNTAKTFNEQLDFDGVVLTKLDGDTRGGAALSIRTVV 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK + GE+ME ++ FYPDRMA RILGMGDV+S VEKAQE QE+ + KKI
Sbjct: 265 EKPIKFISSGEKMEAIDLFYPDRMAQRILGMGDVVSLVEKAQETFDQEETNRLSKKIRKN 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA---EKSLKIMEAMIEAMTP 297
FDF DFL Q + + +MG++ ++GM+PGMGK Q+++ + + K +EA+I +MT
Sbjct: 325 QFDFEDFLSQLQQIKKMGNVKDLLGMLPGMGK----QIKDLDIDDDAFKPVEAIIRSMTY 380
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
EER PEL+ S R+KR+A+ SG + Q+++ L+ Q MR MK +
Sbjct: 381 EERSNPELMNAS--RKKRIAEGSGTSVQEINNLLKQFKDMRKMMKTM 425
>gi|15924227|ref|NP_371761.1| signal recognition particle-like protein [Staphylococcus aureus
subsp. aureus Mu50]
gi|15926820|ref|NP_374353.1| hypothetical protein SA1080 [Staphylococcus aureus subsp. aureus
N315]
gi|148267728|ref|YP_001246671.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus JH9]
gi|150393786|ref|YP_001316461.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus JH1]
gi|156979558|ref|YP_001441817.1| signal recognition particle-like protein [Staphylococcus aureus
subsp. aureus Mu3]
gi|253315595|ref|ZP_04838808.1| signal recognition particle-like protein [Staphylococcus aureus
subsp. aureus str. CF-Marseille]
gi|255006024|ref|ZP_05144625.2| signal recognition particle-like protein [Staphylococcus aureus
subsp. aureus Mu50-omega]
gi|257795707|ref|ZP_05644686.1| signal recognition particle protein [Staphylococcus aureus A9781]
gi|258415931|ref|ZP_05682201.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A9763]
gi|258419678|ref|ZP_05682645.1| signal recognition particle protein [Staphylococcus aureus A9719]
gi|258434849|ref|ZP_05688923.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A9299]
gi|258444575|ref|ZP_05692904.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A8115]
gi|258447592|ref|ZP_05695736.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A6300]
gi|258449434|ref|ZP_05697537.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A6224]
gi|258454813|ref|ZP_05702777.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A5937]
gi|269202853|ref|YP_003282122.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ED98]
gi|282892724|ref|ZP_06300959.1| signal recognition particle protein [Staphylococcus aureus A8117]
gi|282927578|ref|ZP_06335194.1| signal recognition particle protein [Staphylococcus aureus A10102]
gi|295407176|ref|ZP_06816977.1| signal recognition particle protein [Staphylococcus aureus A8819]
gi|296274794|ref|ZP_06857301.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MR1]
gi|297245937|ref|ZP_06929796.1| signal recognition particle protein [Staphylococcus aureus A8796]
gi|384864464|ref|YP_005749823.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|387150380|ref|YP_005741944.1| Signal recognition particle, subunit Ffh SRP54 [Staphylococcus
aureus 04-02981]
gi|417651392|ref|ZP_12301155.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21172]
gi|417802688|ref|ZP_12449745.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21318]
gi|417892215|ref|ZP_12536269.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21201]
gi|418424377|ref|ZP_12997499.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS1]
gi|418427372|ref|ZP_13000384.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS2]
gi|418430213|ref|ZP_13003129.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS3a]
gi|418433178|ref|ZP_13005955.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS4]
gi|418436849|ref|ZP_13008651.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS5]
gi|418439721|ref|ZP_13011428.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS6]
gi|418442773|ref|ZP_13014375.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS7]
gi|418445832|ref|ZP_13017308.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS8]
gi|418448776|ref|ZP_13020168.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS9]
gi|418451600|ref|ZP_13022934.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS10]
gi|418454656|ref|ZP_13025918.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS11a]
gi|418457532|ref|ZP_13028735.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS11b]
gi|418569106|ref|ZP_13133446.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21272]
gi|418638085|ref|ZP_13200388.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-3]
gi|418654726|ref|ZP_13216622.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-99]
gi|418661552|ref|ZP_13223137.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-122]
gi|418878086|ref|ZP_13432321.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1165]
gi|418880914|ref|ZP_13435133.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1213]
gi|418883843|ref|ZP_13438038.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1769]
gi|418886498|ref|ZP_13440646.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1150]
gi|418894936|ref|ZP_13449031.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1057]
gi|418914335|ref|ZP_13468307.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|418920314|ref|ZP_13474247.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC348]
gi|418931307|ref|ZP_13485148.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1750]
gi|418991099|ref|ZP_13538760.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1096]
gi|424768079|ref|ZP_18195372.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CM05]
gi|443636824|ref|ZP_21120917.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21236]
gi|13701037|dbj|BAB42332.1| ffh [Staphylococcus aureus subsp. aureus N315]
gi|14247007|dbj|BAB57399.1| signal recognition particle homolog [Staphylococcus aureus subsp.
aureus Mu50]
gi|147740797|gb|ABQ49095.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Staphylococcus aureus subsp. aureus JH9]
gi|149946238|gb|ABR52174.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus JH1]
gi|156721693|dbj|BAF78110.1| signal recognition particle homolog [Staphylococcus aureus subsp.
aureus Mu3]
gi|257789679|gb|EEV28019.1| signal recognition particle protein [Staphylococcus aureus A9781]
gi|257839267|gb|EEV63741.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A9763]
gi|257844263|gb|EEV68645.1| signal recognition particle protein [Staphylococcus aureus A9719]
gi|257849210|gb|EEV73192.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A9299]
gi|257850068|gb|EEV74021.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A8115]
gi|257853783|gb|EEV76742.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A6300]
gi|257857422|gb|EEV80320.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A6224]
gi|257863196|gb|EEV85960.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A5937]
gi|262075143|gb|ACY11116.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ED98]
gi|282590581|gb|EFB95658.1| signal recognition particle protein [Staphylococcus aureus A10102]
gi|282764721|gb|EFC04846.1| signal recognition particle protein [Staphylococcus aureus A8117]
gi|285816919|gb|ADC37406.1| Signal recognition particle, subunit Ffh SRP54 [Staphylococcus
aureus 04-02981]
gi|294968029|gb|EFG44057.1| signal recognition particle protein [Staphylococcus aureus A8819]
gi|297177101|gb|EFH36355.1| signal recognition particle protein [Staphylococcus aureus A8796]
gi|312829631|emb|CBX34473.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|329727576|gb|EGG64032.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21172]
gi|334274324|gb|EGL92646.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21318]
gi|341858182|gb|EGS98983.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21201]
gi|371978291|gb|EHO95541.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21272]
gi|375014551|gb|EHS08232.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-99]
gi|375023309|gb|EHS16772.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-3]
gi|375038734|gb|EHS31695.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-122]
gi|377694208|gb|EHT18573.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1165]
gi|377694742|gb|EHT19106.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1057]
gi|377714589|gb|EHT38788.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1750]
gi|377714930|gb|EHT39128.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1769]
gi|377723221|gb|EHT47346.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1096]
gi|377725451|gb|EHT49564.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1150]
gi|377731807|gb|EHT55860.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1213]
gi|377757837|gb|EHT81725.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|377765673|gb|EHT89522.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC348]
gi|387718608|gb|EIK06566.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS3a]
gi|387718959|gb|EIK06915.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS2]
gi|387720284|gb|EIK08196.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS1]
gi|387725618|gb|EIK13222.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS4]
gi|387727953|gb|EIK15453.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS5]
gi|387730683|gb|EIK18044.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS6]
gi|387735760|gb|EIK22870.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS8]
gi|387737438|gb|EIK24504.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS7]
gi|387737992|gb|EIK25046.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS9]
gi|387744481|gb|EIK31245.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS10]
gi|387745771|gb|EIK32521.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS11a]
gi|387747264|gb|EIK33973.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS11b]
gi|402348716|gb|EJU83695.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CM05]
gi|408423431|emb|CCJ10842.1| Signal recognition particle homolog [Staphylococcus aureus subsp.
aureus ST228]
gi|408425421|emb|CCJ12808.1| Signal recognition particle homolog [Staphylococcus aureus subsp.
aureus ST228]
gi|408427409|emb|CCJ14772.1| Signal recognition particle homolog [Staphylococcus aureus subsp.
aureus ST228]
gi|408429396|emb|CCJ26561.1| Signal recognition particle homolog [Staphylococcus aureus subsp.
aureus ST228]
gi|408431384|emb|CCJ18699.1| Signal recognition particle homolog [Staphylococcus aureus subsp.
aureus ST228]
gi|408433378|emb|CCJ20663.1| Signal recognition particle homolog [Staphylococcus aureus subsp.
aureus ST228]
gi|408435369|emb|CCJ22629.1| Signal recognition particle homolog [Staphylococcus aureus subsp.
aureus ST228]
gi|408437354|emb|CCJ24597.1| Signal recognition particle homolog [Staphylococcus aureus subsp.
aureus ST228]
gi|443406801|gb|ELS65371.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21236]
Length = 455
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 166/346 (47%), Positives = 249/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI
Sbjct: 87 MGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 NQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K+VK + P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V
Sbjct: 207 KEVKEIAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|420185458|ref|ZP_14691550.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM040]
gi|394254444|gb|EJD99413.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM040]
Length = 455
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 166/346 (47%), Positives = 251/346 (72%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + A PTV+++ GLQG GKTT + KLA + KK K +LVAGD+YRPAAI
Sbjct: 87 MGGENTSIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPLLVAGDIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ +PVY+ G +V P QI + L+ AK++++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 DQLQTVGKQIDIPVYSEGDQVSPQQIVENALKHAKEEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++VK + P E++LVVDAMTGQ+A + +F+ ++ ++G LTKLDGD+RGGAALS++ V
Sbjct: 207 QEVKEISKPDEIMLVVDAMTGQDAVNVAQSFDEQLDVSGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ ++K + ++A+I++MTP+
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER PE L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERSNPETLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|257867539|ref|ZP_05647192.1| signal recognition particle protein [Enterococcus casseliflavus
EC30]
gi|257873868|ref|ZP_05653521.1| signal recognition particle protein [Enterococcus casseliflavus
EC10]
gi|257877619|ref|ZP_05657272.1| signal recognition particle protein [Enterococcus casseliflavus
EC20]
gi|325571330|ref|ZP_08146830.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Enterococcus casseliflavus
ATCC 12755]
gi|420262069|ref|ZP_14764712.1| signal recognition particle protein [Enterococcus sp. C1]
gi|257801595|gb|EEV30525.1| signal recognition particle protein [Enterococcus casseliflavus
EC30]
gi|257808032|gb|EEV36854.1| signal recognition particle protein [Enterococcus casseliflavus
EC10]
gi|257811785|gb|EEV40605.1| signal recognition particle protein [Enterococcus casseliflavus
EC20]
gi|325155806|gb|EGC68002.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Enterococcus casseliflavus
ATCC 12755]
gi|394771091|gb|EJF50875.1| signal recognition particle protein [Enterococcus sp. C1]
Length = 472
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 165/332 (49%), Positives = 243/332 (73%), Gaps = 4/332 (1%)
Query: 15 PTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPV 73
PT+I++AGLQG GKTT + KLAN+L K + +++AGDVYRPAAIDQL +LG+Q+ VPV
Sbjct: 101 PTIIMMAGLQGAGKTTFAGKLANHLIKTENARPLMIAGDVYRPAAIDQLKVLGQQLDVPV 160
Query: 74 YTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLL 133
+ GT+V P +I +QGL A++K D V++DTAGRL ID+ +M+ELK +K + P E+LL
Sbjct: 161 FDMGTDVSPVEIVRQGLALAREKKNDYVLIDTAGRLHIDENLMEELKQIKDLAQPNEILL 220
Query: 134 VVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERM 193
VVDAMTGQ+A + +FN ++GITG ++TKLDGD+RGGAALS+++V+G PIK G GE++
Sbjct: 221 VVDAMTGQDAVNVAESFNQQLGITGVVITKLDGDTRGGAALSIRQVTGAPIKFTGTGEKL 280
Query: 194 EDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRT 253
DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+ +K+ +FDFNDF++Q
Sbjct: 281 TDLEVFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELAQKMKENSFDFNDFVEQIDQ 340
Query: 254 VARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVR 312
V MG + ++ MIPGM ++ + V+ K + +AM+ +MTP ERE P+LL +P R
Sbjct: 341 VMGMGPIEDLLKMIPGMSQMPGIENVKVDPKQIARQKAMVYSMTPAERENPDLL--NPSR 398
Query: 313 RKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
R+R+A SG + +V++++ Q + R M+ +
Sbjct: 399 RRRIAAGSGNSVVEVNRMIKQFKESRKMMQQM 430
>gi|224539094|ref|ZP_03679633.1| hypothetical protein BACCELL_03995 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519284|gb|EEF88389.1| hypothetical protein BACCELL_03995 [Bacteroides cellulosilyticus
DSM 14838]
Length = 439
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 173/347 (49%), Positives = 239/347 (68%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE +E+ + +P VIL++GLQG GKTT S KLA LK K+ K +LVA DVYRPAAI
Sbjct: 86 MGGETAEIDL-EGKPAVILMSGLQGSGKTTFSGKLARMLKTKKNKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +L EQ+GVP+Y+ P +IA+ ++EAK K DVVIVDTAGRL +D+ MM+E+
Sbjct: 145 EQLRVLAEQIGVPIYSEPDSKNPVKIAENAIQEAKAKGYDVVIVDTAGRLAVDEEMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K+ +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 AAIKKAINPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAALSIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+++ ++ F+P RM+ RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VNKPIKFVGTGEKLDAIDQFHPSRMSDRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP E
Sbjct: 325 NQFDFNDFLSQIAQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPAE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R P LL S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 384 RSNPALLNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|449982402|ref|ZP_21818256.1| signal recognition particle protein [Streptococcus mutans 5SM3]
gi|450004868|ref|ZP_21826331.1| signal recognition particle protein [Streptococcus mutans NMT4863]
gi|449174874|gb|EMB77332.1| signal recognition particle protein [Streptococcus mutans 5SM3]
gi|449189437|gb|EMB91104.1| signal recognition particle protein [Streptococcus mutans NMT4863]
Length = 516
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 169/353 (47%), Positives = 242/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
+FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEDEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|418642709|ref|ZP_13204895.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-24]
gi|375015822|gb|EHS09466.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-24]
Length = 455
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 166/346 (47%), Positives = 249/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI
Sbjct: 87 MGGENTSMNMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 NQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K+VK + P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V
Sbjct: 207 KEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|169824222|ref|YP_001691833.1| signal recognition particle [Finegoldia magna ATCC 29328]
gi|302380887|ref|ZP_07269349.1| signal recognition particle protein [Finegoldia magna
ACS-171-V-Col3]
gi|303234951|ref|ZP_07321576.1| signal recognition particle protein [Finegoldia magna BVS033A4]
gi|417925858|ref|ZP_12569273.1| signal recognition particle protein [Finegoldia magna
SY403409CC001050417]
gi|167831027|dbj|BAG07943.1| signal recognition particle [Finegoldia magna ATCC 29328]
gi|302311265|gb|EFK93284.1| signal recognition particle protein [Finegoldia magna
ACS-171-V-Col3]
gi|302494069|gb|EFL53850.1| signal recognition particle protein [Finegoldia magna BVS033A4]
gi|341590783|gb|EGS34014.1| signal recognition particle protein [Finegoldia magna
SY403409CC001050417]
Length = 446
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 180/349 (51%), Positives = 258/349 (73%), Gaps = 4/349 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG + +L + +PTVI+L GLQG GKTT + KLA LK + KS +LVA D+YRPAAI
Sbjct: 87 MGEKEEKLNVSPMKPTVIMLCGLQGAGKTTHAGKLALNLKNKNKSVLLVACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G +VGV V+ G ++ P +I+K+ +EEAK+KN+D VI+DTAGRL ID +MDELK
Sbjct: 147 QLQVVGGKVGVEVFEMG-QINPVEISKKAIEEAKRKNIDYVIIDTAGRLHIDDTLMDELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K+ +NP+++LLVVDAMTGQ+A + FN ++ ITG ILTKLDGD+RGGAALS+++V+
Sbjct: 206 NIKQEVNPSDILLVVDAMTGQDAVNVAAKFNEDLDITGIILTKLDGDARGGAALSIRQVA 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK +G GE++ DLEPF+PDRMA RILGMGDVLS +EKAQ ++ A+E+++KI +
Sbjct: 266 DKPIKFIGVGEKLGDLEPFHPDRMASRILGMGDVLSLIEKAQNQFDEKKAKELEEKIKAQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
+FDFNDFL Q + + +MG M ++ MIPG+ QV K +EA+I++MT +ER
Sbjct: 326 SFDFNDFLDQMQQIKKMGPMQDILAMIPGVDSKMLKQVNFDNKEFDKIEAIIKSMTKQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME 349
E P++++ S RRKR+A+ G+ + V++L+ Q +M+V MKN MG ++
Sbjct: 386 ENPDIISIS--RRKRIAKGCGQDQVAVNKLLKQFKEMKVMMKN-MGALQ 431
>gi|338214863|ref|YP_004658926.1| signal recognition particle protein [Runella slithyformis DSM
19594]
gi|336308692|gb|AEI51794.1| signal recognition particle protein [Runella slithyformis DSM
19594]
Length = 437
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 175/352 (49%), Positives = 243/352 (69%), Gaps = 11/352 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG+ +E + K P VIL+AGLQG GKTT S KLA LK+QG+ +L A D+YRPAAID
Sbjct: 86 MGGQ-AEAINIKGDPAVILIAGLQGSGKTTFSGKLAYMLKRQGRQVLLAACDIYRPAAID 144
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+GV VY+ IA+ + AKK +VIVDTAGRL +D+ MM E++
Sbjct: 145 QLKVLGEQIGVEVYSEPDSRDAVAIAQNAVAHAKKSGKKIVIVDTAGRLAVDEVMMKEVE 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + P+E+L VVD+MTGQ+A TFN + G +LTKLDGD+RGGAALS++++
Sbjct: 205 NIKSSIKPSEILFVVDSMTGQDAVNTAKTFNERLNFDGVVLTKLDGDARGGAALSIRQIV 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK + GE+ME L+ FYPDRMA RILGMGDVLS VE+AQ+ +++A+ + K+ +
Sbjct: 265 EKPIKYISTGEKMEALDSFYPDRMASRILGMGDVLSLVERAQQAFDEDEAKRINAKMRAN 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE---KSLKIMEAMIEAMTP 297
FDFNDFL Q + + +MG++ ++GMIPGMG + +++ E S K +EA+I +MTP
Sbjct: 325 KFDFNDFLGQLQQIKKMGNVKDLLGMIPGMG----SAMKDMEIDNDSFKPIEAIIHSMTP 380
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME 349
+ERE P+++ S R+KR+A SG + QQV+ L+ Q +MR MK M ME
Sbjct: 381 KERENPDVIDGS--RKKRIAGGSGTSLQQVNNLLKQFDEMRKMMKK-MNTME 429
>gi|325860535|ref|ZP_08173639.1| signal recognition particle protein [Prevotella denticola CRIS
18C-A]
gi|325481920|gb|EGC84949.1| signal recognition particle protein [Prevotella denticola CRIS
18C-A]
Length = 456
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 177/347 (51%), Positives = 240/347 (69%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE L +RPT+IL++GLQG GKTT S KLAN LK K+ K +LVA DVYRPAAI
Sbjct: 86 MGGEAVGLNLV-NRPTIILMSGLQGSGKTTFSGKLANMLKTKEHKHPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL ++GEQVGVPVY+ ++IA + EAK K DVVI+DTAGRL +D+ MM+E+
Sbjct: 145 EQLKVVGEQVGVPVYSEPDNKTVNEIADHAIAEAKAKGNDVVIIDTAGRLAVDEDMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K+ + P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 ESLKKHVTPDETLFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A+ +QKKI
Sbjct: 265 VTKPIKFIGTGEKMEAVDVFHPGRMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP+E
Sbjct: 325 NQFDFNDFYNQIQQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIEAIIQSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 384 RTNPEVLNNS--RRQRIAKGSGTNLQEVNRLIKQFDQTRKMMKMVTG 428
>gi|21282849|ref|NP_645937.1| hypothetical protein MW1120 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486076|ref|YP_043297.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57651806|ref|YP_186112.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus COL]
gi|87161356|ref|YP_493827.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88194944|ref|YP_499744.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151221359|ref|YP_001332181.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus str. Newman]
gi|221142027|ref|ZP_03566520.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|253733525|ref|ZP_04867690.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus TCH130]
gi|258452535|ref|ZP_05700541.1| signal recognition particle protein [Staphylococcus aureus A5948]
gi|262048135|ref|ZP_06021022.1| hypothetical protein SAD30_1911 [Staphylococcus aureus D30]
gi|262051866|ref|ZP_06024082.1| hypothetical protein SA930_1416 [Staphylococcus aureus 930918-3]
gi|284024161|ref|ZP_06378559.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 132]
gi|294848231|ref|ZP_06788978.1| signal recognition particle protein [Staphylococcus aureus A9754]
gi|297208119|ref|ZP_06924550.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300912199|ref|ZP_07129642.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus TCH70]
gi|304381199|ref|ZP_07363852.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|379014428|ref|YP_005290664.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VC40]
gi|384861831|ref|YP_005744551.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|384869771|ref|YP_005752485.1| Signal recognition particle protein [Staphylococcus aureus subsp.
aureus T0131]
gi|385781465|ref|YP_005757636.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 11819-97]
gi|387142846|ref|YP_005731239.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus TW20]
gi|415686426|ref|ZP_11450515.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CGS01]
gi|417650106|ref|ZP_12299883.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21189]
gi|417653191|ref|ZP_12302925.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21193]
gi|417797221|ref|ZP_12444419.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21305]
gi|417899954|ref|ZP_12543853.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21259]
gi|418281348|ref|ZP_12894159.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21178]
gi|418312566|ref|ZP_12924075.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21334]
gi|418316118|ref|ZP_12927562.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21340]
gi|418317672|ref|ZP_12929088.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21232]
gi|418321833|ref|ZP_12933172.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VCU006]
gi|418570822|ref|ZP_13135083.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21283]
gi|418572240|ref|ZP_13136452.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21333]
gi|418647521|ref|ZP_13209585.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-88]
gi|418649610|ref|ZP_13211638.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-91]
gi|418658938|ref|ZP_13220635.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-111]
gi|418873564|ref|ZP_13427859.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-125]
gi|418875172|ref|ZP_13429432.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC93]
gi|418911844|ref|ZP_13465827.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG547]
gi|418934139|ref|ZP_13487962.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC128]
gi|418946951|ref|ZP_13499350.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-157]
gi|418955426|ref|ZP_13507366.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-189]
gi|418988058|ref|ZP_13535731.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1835]
gi|419774283|ref|ZP_14300253.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CO-23]
gi|421150123|ref|ZP_15609779.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus str. Newbould 305]
gi|422742354|ref|ZP_16796360.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MRSA177]
gi|422745532|ref|ZP_16799471.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MRSA131]
gi|424785067|ref|ZP_18211870.1| SRP54 subunit [Staphylococcus aureus CN79]
gi|440705976|ref|ZP_20886725.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21282]
gi|440734683|ref|ZP_20914295.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|443639581|ref|ZP_21123587.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21196]
gi|448742257|ref|ZP_21724207.1| signal recognition particle protein [Staphylococcus aureus
KT/314250]
gi|448744055|ref|ZP_21725959.1| signal recognition particle protein [Staphylococcus aureus KT/Y21]
gi|21204288|dbj|BAB94985.1| ffh [Staphylococcus aureus subsp. aureus MW2]
gi|49244519|emb|CAG42948.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57285992|gb|AAW38086.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus COL]
gi|87127330|gb|ABD21844.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87202502|gb|ABD30312.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|150374159|dbj|BAF67419.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus str. Newman]
gi|253728579|gb|EES97308.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus TCH130]
gi|257859753|gb|EEV82595.1| signal recognition particle protein [Staphylococcus aureus A5948]
gi|259160267|gb|EEW45295.1| hypothetical protein SA930_1416 [Staphylococcus aureus 930918-3]
gi|259163701|gb|EEW48256.1| hypothetical protein SAD30_1911 [Staphylococcus aureus D30]
gi|269940729|emb|CBI49110.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus TW20]
gi|294825031|gb|EFG41453.1| signal recognition particle protein [Staphylococcus aureus A9754]
gi|296887362|gb|EFH26264.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300886445|gb|EFK81647.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus TCH70]
gi|302751060|gb|ADL65237.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304340182|gb|EFM06123.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|315198476|gb|EFU28805.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CGS01]
gi|320140947|gb|EFW32794.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320144338|gb|EFW36104.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MRSA177]
gi|329313906|gb|AEB88319.1| Signal recognition particle protein [Staphylococcus aureus subsp.
aureus T0131]
gi|329724762|gb|EGG61267.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21189]
gi|329733573|gb|EGG69901.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21193]
gi|334267269|gb|EGL85733.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21305]
gi|341843562|gb|EGS84785.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21259]
gi|364522454|gb|AEW65204.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 11819-97]
gi|365165170|gb|EHM56998.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21178]
gi|365224448|gb|EHM65713.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VCU006]
gi|365238211|gb|EHM79048.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21334]
gi|365241789|gb|EHM82524.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21340]
gi|365244940|gb|EHM85592.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21232]
gi|371983002|gb|EHP00150.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21283]
gi|371984724|gb|EHP01833.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21333]
gi|374363125|gb|AEZ37230.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VC40]
gi|375029487|gb|EHS22814.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-88]
gi|375029983|gb|EHS23308.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-91]
gi|375037200|gb|EHS30252.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-111]
gi|375366101|gb|EHS70113.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-125]
gi|375370909|gb|EHS74701.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-189]
gi|375377148|gb|EHS80638.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-157]
gi|377719846|gb|EHT44016.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1835]
gi|377725222|gb|EHT49337.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG547]
gi|377770232|gb|EHT93994.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC93]
gi|377770882|gb|EHT94641.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC128]
gi|383971809|gb|EID87871.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CO-23]
gi|394329513|gb|EJE55615.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus str. Newbould 305]
gi|421956477|gb|EKU08806.1| SRP54 subunit [Staphylococcus aureus CN79]
gi|436431711|gb|ELP29064.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|436507507|gb|ELP43187.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21282]
gi|443406788|gb|ELS65359.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21196]
gi|445546972|gb|ELY15248.1| signal recognition particle protein [Staphylococcus aureus
KT/314250]
gi|445562651|gb|ELY18818.1| signal recognition particle protein [Staphylococcus aureus KT/Y21]
Length = 455
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 166/346 (47%), Positives = 249/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI
Sbjct: 87 MGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 NQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K+VK + P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V
Sbjct: 207 KEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|82750841|ref|YP_416582.1| signal recognition particle protein [Staphylococcus aureus RF122]
gi|82656372|emb|CAI80790.1| signal recognition particle protein [Staphylococcus aureus RF122]
Length = 455
Score = 337 bits (863), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 166/346 (47%), Positives = 249/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI
Sbjct: 87 MGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 NQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K+VK + P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V
Sbjct: 207 KEVKDIAKPNEIILVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|49483400|ref|YP_040624.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MRSA252]
gi|258423922|ref|ZP_05686807.1| signal recognition particle protein [Staphylococcus aureus A9635]
gi|282903791|ref|ZP_06311679.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus C160]
gi|282905555|ref|ZP_06313410.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282908530|ref|ZP_06316360.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282910809|ref|ZP_06318612.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282916487|ref|ZP_06324249.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus D139]
gi|282918935|ref|ZP_06326670.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus C427]
gi|283770299|ref|ZP_06343191.1| signal recognition particle subunit SRP54 [Staphylococcus aureus
subsp. aureus H19]
gi|283957979|ref|ZP_06375430.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus A017934/97]
gi|295427723|ref|ZP_06820355.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297591318|ref|ZP_06949956.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MN8]
gi|379020946|ref|YP_005297608.1| Signal recognition particle subunit Ffh SRP54 [Staphylococcus
aureus subsp. aureus M013]
gi|384547481|ref|YP_005736734.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ED133]
gi|384549992|ref|YP_005739244.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus JKD6159]
gi|384867880|ref|YP_005748076.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus TCH60]
gi|387602512|ref|YP_005734033.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ST398]
gi|404478577|ref|YP_006710007.1| signal recognition particle protein [Staphylococcus aureus
08BA02176]
gi|415683827|ref|ZP_11449029.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CGS00]
gi|416839281|ref|ZP_11902675.1| signal recognition particle protein [Staphylococcus aureus O11]
gi|416847445|ref|ZP_11907167.1| signal recognition particle protein [Staphylococcus aureus O46]
gi|417891836|ref|ZP_12535893.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21200]
gi|417896155|ref|ZP_12540122.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21235]
gi|417901448|ref|ZP_12545324.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21266]
gi|418283091|ref|ZP_12895848.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21202]
gi|418308706|ref|ZP_12920312.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21194]
gi|418309899|ref|ZP_12921450.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21331]
gi|418559164|ref|ZP_13123710.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21252]
gi|418561380|ref|ZP_13125871.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21262]
gi|418566688|ref|ZP_13131061.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21264]
gi|418582071|ref|ZP_13146149.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1605]
gi|418597679|ref|ZP_13161201.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21342]
gi|418599631|ref|ZP_13163111.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21343]
gi|418603153|ref|ZP_13166544.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21345]
gi|418889028|ref|ZP_13443164.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1524]
gi|418891870|ref|ZP_13445985.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1176]
gi|418897774|ref|ZP_13451844.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|418900644|ref|ZP_13454701.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1214]
gi|418908948|ref|ZP_13462951.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG149]
gi|418917032|ref|ZP_13470991.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1267]
gi|418922819|ref|ZP_13476736.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1233]
gi|418950562|ref|ZP_13502726.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-160]
gi|418982150|ref|ZP_13529858.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1242]
gi|418985818|ref|ZP_13533504.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1500]
gi|418993856|ref|ZP_13541492.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG290]
gi|49241529|emb|CAG40215.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MRSA252]
gi|257845951|gb|EEV69980.1| signal recognition particle protein [Staphylococcus aureus A9635]
gi|282316745|gb|EFB47119.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus C427]
gi|282319927|gb|EFB50275.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus D139]
gi|282325414|gb|EFB55723.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282327592|gb|EFB57875.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282330847|gb|EFB60361.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282595409|gb|EFC00373.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus C160]
gi|283460446|gb|EFC07536.1| signal recognition particle subunit SRP54 [Staphylococcus aureus
subsp. aureus H19]
gi|283470450|emb|CAQ49661.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ST398]
gi|283790128|gb|EFC28945.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus A017934/97]
gi|295128081|gb|EFG57715.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297576204|gb|EFH94920.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MN8]
gi|298694530|gb|ADI97752.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ED133]
gi|302332841|gb|ADL23034.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus JKD6159]
gi|312438385|gb|ADQ77456.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus TCH60]
gi|315194125|gb|EFU24518.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CGS00]
gi|323441012|gb|EGA98719.1| signal recognition particle protein [Staphylococcus aureus O11]
gi|323442329|gb|EGA99959.1| signal recognition particle protein [Staphylococcus aureus O46]
gi|341841056|gb|EGS82528.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21235]
gi|341845287|gb|EGS86489.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21266]
gi|341851122|gb|EGS92051.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21200]
gi|359830255|gb|AEV78233.1| Signal recognition particle, subunit Ffh SRP54 [Staphylococcus
aureus subsp. aureus M013]
gi|365168688|gb|EHM60026.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21202]
gi|365237732|gb|EHM78575.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21194]
gi|365238022|gb|EHM78861.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21331]
gi|371969958|gb|EHO87396.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21264]
gi|371975455|gb|EHO92749.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21252]
gi|371977591|gb|EHO94855.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21262]
gi|374393741|gb|EHQ65045.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21342]
gi|374393882|gb|EHQ65185.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21345]
gi|374396289|gb|EHQ67530.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21343]
gi|375376734|gb|EHS80253.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-160]
gi|377703112|gb|EHT27428.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1214]
gi|377704431|gb|EHT28740.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1242]
gi|377705636|gb|EHT29940.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1500]
gi|377710481|gb|EHT34719.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1605]
gi|377731202|gb|EHT55259.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1176]
gi|377736142|gb|EHT60172.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1233]
gi|377745906|gb|EHT69881.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG290]
gi|377750206|gb|EHT74144.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1267]
gi|377753986|gb|EHT77896.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG149]
gi|377754538|gb|EHT78447.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1524]
gi|377760809|gb|EHT84685.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|404440066|gb|AFR73259.1| signal recognition particle protein [Staphylococcus aureus
08BA02176]
Length = 455
Score = 337 bits (863), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 166/346 (47%), Positives = 249/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI
Sbjct: 87 MGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 NQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K+VK + P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V
Sbjct: 207 KEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|417903373|ref|ZP_12547220.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21269]
gi|341849994|gb|EGS91127.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21269]
Length = 455
Score = 337 bits (863), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 166/346 (47%), Positives = 249/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI
Sbjct: 87 MGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 NQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K+VK + P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V
Sbjct: 207 KEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|423070367|ref|ZP_17059143.1| signal recognition particle protein [Streptococcus intermedius
F0413]
gi|355365728|gb|EHG13448.1| signal recognition particle protein [Streptococcus intermedius
F0413]
Length = 524
Score = 337 bits (863), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 173/355 (48%), Positives = 246/355 (69%), Gaps = 13/355 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEAARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV++ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFSLGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNNQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAM 295
FDFNDF+ Q V MG M ++ MIPGM PA +V E E + K A++ +M
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPAMKNFKVDENEIARK--RAIVSSM 383
Query: 296 TPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
TP ERE P LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 384 TPAERENPNLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSVMQ---GVMSG 433
>gi|343083145|ref|YP_004772440.1| signal recognition particle protein [Cyclobacterium marinum DSM
745]
gi|342351679|gb|AEL24209.1| signal recognition particle protein [Cyclobacterium marinum DSM
745]
Length = 445
Score = 337 bits (863), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 178/359 (49%), Positives = 240/359 (66%), Gaps = 6/359 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG E+ K P+V+L++GLQG GKTT S KL YLKKQG+ +LVA D+YRPAAI+
Sbjct: 86 MGGAKEEINL-KGDPSVVLISGLQGSGKTTFSGKLGTYLKKQGRQVLLVACDIYRPAAIE 144
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LGEQ+G+ VY +IA +E AKK VIVDTAGRL +D+ MMDE+
Sbjct: 145 QLKTLGEQIGIEVYAEPGNQNALEIASNAIEYAKKSGKKTVIVDTAGRLAVDEVMMDEIS 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K+ LNP+E L VVD+MTGQ+A TF+ + G +LTKLDGDSRGGAA+S++ V
Sbjct: 205 ALKQSLNPSETLFVVDSMTGQDAVNTAKTFDERLDFDGVVLTKLDGDSRGGAAISIRHVV 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK + GE+ME+L+ FYPDRMA RILGMGDV+S VEKAQ+ +++A+ + KI
Sbjct: 265 NKPIKFISTGEKMENLDLFYPDRMAQRILGMGDVVSLVEKAQQSFDEDEAKRLNAKIRKN 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF+DFL Q + +MG++ ++GMIPGMGK + E + I EA+I +MTP+ER
Sbjct: 325 QFDFDDFLSQLDQIKKMGNIKDLLGMIPGMGKAIKGLDIDDESFIPI-EAIIRSMTPDER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 359
P ++ S RR+R+A+ SG+T Q+V+ L+ Q MR MK + + GG+ AL L
Sbjct: 384 GNPSIIDGS--RRRRIAKGSGRTIQEVNNLMKQFADMRKMMKQMNKM--GGAQKALGAL 438
>gi|422878857|ref|ZP_16925323.1| signal recognition particle protein [Streptococcus sanguinis
SK1059]
gi|422928706|ref|ZP_16961648.1| signal recognition particle protein [Streptococcus sanguinis ATCC
29667]
gi|422931680|ref|ZP_16964611.1| signal recognition particle protein [Streptococcus sanguinis SK340]
gi|332366910|gb|EGJ44651.1| signal recognition particle protein [Streptococcus sanguinis
SK1059]
gi|339616120|gb|EGQ20775.1| signal recognition particle protein [Streptococcus sanguinis ATCC
29667]
gi|339619980|gb|EGQ24555.1| signal recognition particle protein [Streptococcus sanguinis SK340]
Length = 534
Score = 337 bits (863), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 244/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 97 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 156
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL
Sbjct: 157 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQEL 216
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 217 SDVKALANPNEILLVVDAMIGQEAANVAREFNSQLEVTGIILTKIDGDTRGGAALSVRQI 276
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 277 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRE 336
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP
Sbjct: 337 NTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTP 395
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 396 AERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 443
>gi|262282312|ref|ZP_06060080.1| signal recognition particle protein [Streptococcus sp. 2_1_36FAA]
gi|262261603|gb|EEY80301.1| signal recognition particle protein [Streptococcus sp. 2_1_36FAA]
Length = 524
Score = 337 bits (863), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 176/386 (45%), Positives = 255/386 (66%), Gaps = 26/386 (6%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKVNHNDYVLIDTAGRLQIDEKLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 SDVKALANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M +I M+PGM PA + E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQGMGPMEDLIKMLPGMAS-NPALKNFKVDEREIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM-GVME------- 349
EERE P+LL +P RR+R+A SG + V++ + Q + M+ ++ G M
Sbjct: 386 EERENPDLL--TPSRRRRIANGSGNSFVDVNKFIKDFNQSKQLMQGVLSGDMSKMMKQMG 443
Query: 350 ------------GGSLPALSNLEDAL 363
GG++P +S L+D +
Sbjct: 444 LNPNNMPKNMPGGGAMPDMSALQDMM 469
>gi|116495084|ref|YP_806818.1| Signal recognition particle GTPase [Lactobacillus casei ATCC 334]
gi|116105234|gb|ABJ70376.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Lactobacillus casei ATCC 334]
Length = 478
Score = 337 bits (863), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 174/361 (48%), Positives = 247/361 (68%), Gaps = 8/361 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG L A PTVI++AGLQG GKTT KL+ YL + +L+A DVYRPAAI
Sbjct: 87 MGEAAVPLNKAPHIPTVIMMAGLQGAGKTTTVGKLSKYLMDNDSARPLLIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ VPV+ GT+V P +I +QGL AK+ D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLQTIGKQLNVPVFEMGTDVDPVEIVRQGLATAKENKNDYVLIDTAGRLQIDEKLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K++K + +P ++LLV DAMTGQ A + FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KNIKELAHPNDILLVDDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A EM +KI
Sbjct: 267 TGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKNYDEKQAMEMAEKIRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
+FDFNDFL Q +++MG + ++ MIPGM A V+ K + M+A++ +MTP+
Sbjct: 327 NSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVYSMTPQ 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSN 358
ERE P+LL +P RR+R+A SG+ +V++++ Q Q K +M M G++ L
Sbjct: 387 EREDPDLL--NPSRRRRLAAGSGRPVVEVNRMIKQFNQ----SKQMMNQMSKGNMKGLDG 440
Query: 359 L 359
L
Sbjct: 441 L 441
>gi|418323809|ref|ZP_12935071.1| signal recognition particle protein [Staphylococcus pettenkoferi
VCU012]
gi|365229155|gb|EHM70318.1| signal recognition particle protein [Staphylococcus pettenkoferi
VCU012]
Length = 455
Score = 337 bits (863), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 164/346 (47%), Positives = 251/346 (72%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + A PTV+++ GLQG GKTT + KLA + KK K +LVA D+YRPAAI
Sbjct: 87 MGGENATIQMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ +PVY+ G +V+P I ++ AK++++D VI+DTAGRL +D+A+M+EL
Sbjct: 147 DQLQTVGKQLDIPVYSEGDQVQPQDIVDHAIQHAKEEHLDFVIIDTAGRLHVDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++VK V P E++LVVDAMTGQ+A + +F+ ++ ++ LTKLDGD+RGGAALS++ V
Sbjct: 207 QEVKEVSKPNEIMLVVDAMTGQDAVNVAESFDNQLDVSSVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LEPF+P+RMA RILGMGDVLS +EKAQ+ + +E A++++KK+ +
Sbjct: 267 TQKPIKFVGMSEKLDGLEPFHPERMASRILGMGDVLSLIEKAQQDVDEEKAKDLEKKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPT 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ERE P +L S R+KR+A+ SG+T Q+V++L+ Q +M+ MK
Sbjct: 387 ERENPAVLNVS--RKKRIAKGSGRTLQEVNRLMKQFNEMKKMMKQF 430
>gi|282920020|ref|ZP_06327749.1| signal recognition particle protein [Staphylococcus aureus A9765]
gi|418286466|ref|ZP_12899112.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21209]
gi|418579068|ref|ZP_13143163.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1114]
gi|418903446|ref|ZP_13457487.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1770]
gi|418925470|ref|ZP_13479372.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG2018]
gi|418928494|ref|ZP_13482380.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1612]
gi|282594736|gb|EFB99720.1| signal recognition particle protein [Staphylococcus aureus A9765]
gi|365167174|gb|EHM58650.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21209]
gi|377697095|gb|EHT21450.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1114]
gi|377738406|gb|EHT62415.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1612]
gi|377742461|gb|EHT66446.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1770]
gi|377744539|gb|EHT68516.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG2018]
Length = 455
Score = 337 bits (863), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 166/346 (47%), Positives = 249/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI
Sbjct: 87 MGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 NQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K+VK + P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V
Sbjct: 207 KEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|163941583|ref|YP_001646467.1| signal recognition particle protein [Bacillus weihenstephanensis
KBAB4]
gi|229013028|ref|ZP_04170193.1| Signal recognition particle protein [Bacillus mycoides DSM 2048]
gi|229061448|ref|ZP_04198793.1| Signal recognition particle protein [Bacillus cereus AH603]
gi|229134653|ref|ZP_04263462.1| Signal recognition particle protein [Bacillus cereus BDRD-ST196]
gi|229168584|ref|ZP_04296307.1| Signal recognition particle protein [Bacillus cereus AH621]
gi|423489021|ref|ZP_17465703.1| signal recognition particle protein [Bacillus cereus BtB2-4]
gi|423494746|ref|ZP_17471390.1| signal recognition particle protein [Bacillus cereus CER057]
gi|423498462|ref|ZP_17475079.1| signal recognition particle protein [Bacillus cereus CER074]
gi|423518535|ref|ZP_17495016.1| signal recognition particle protein [Bacillus cereus HuA2-4]
gi|423592159|ref|ZP_17568190.1| signal recognition particle protein [Bacillus cereus VD048]
gi|423598844|ref|ZP_17574844.1| signal recognition particle protein [Bacillus cereus VD078]
gi|423661315|ref|ZP_17636484.1| signal recognition particle protein [Bacillus cereus VDM022]
gi|423669419|ref|ZP_17644448.1| signal recognition particle protein [Bacillus cereus VDM034]
gi|423674402|ref|ZP_17649341.1| signal recognition particle protein [Bacillus cereus VDM062]
gi|163863780|gb|ABY44839.1| signal recognition particle protein [Bacillus weihenstephanensis
KBAB4]
gi|228614990|gb|EEK72092.1| Signal recognition particle protein [Bacillus cereus AH621]
gi|228648699|gb|EEL04725.1| Signal recognition particle protein [Bacillus cereus BDRD-ST196]
gi|228717871|gb|EEL69519.1| Signal recognition particle protein [Bacillus cereus AH603]
gi|228748282|gb|EEL98142.1| Signal recognition particle protein [Bacillus mycoides DSM 2048]
gi|401150839|gb|EJQ58291.1| signal recognition particle protein [Bacillus cereus CER057]
gi|401160511|gb|EJQ67889.1| signal recognition particle protein [Bacillus cereus CER074]
gi|401160743|gb|EJQ68118.1| signal recognition particle protein [Bacillus cereus HuA2-4]
gi|401232292|gb|EJR38794.1| signal recognition particle protein [Bacillus cereus VD048]
gi|401237114|gb|EJR43571.1| signal recognition particle protein [Bacillus cereus VD078]
gi|401298546|gb|EJS04146.1| signal recognition particle protein [Bacillus cereus VDM034]
gi|401301356|gb|EJS06945.1| signal recognition particle protein [Bacillus cereus VDM022]
gi|401309953|gb|EJS15286.1| signal recognition particle protein [Bacillus cereus VDM062]
gi|402432269|gb|EJV64328.1| signal recognition particle protein [Bacillus cereus BtB2-4]
Length = 449
Score = 337 bits (863), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 172/351 (49%), Positives = 249/351 (70%), Gaps = 8/351 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI
Sbjct: 87 MGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +M EL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMGEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V
Sbjct: 207 AKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMT 296
+F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT
Sbjct: 327 LSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMT 384
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 385 KVEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|313673954|ref|YP_004052065.1| signal recognition particle subunit ffh/srp54 (srp54)
[Calditerrivibrio nitroreducens DSM 19672]
gi|312940710|gb|ADR19902.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Calditerrivibrio nitroreducens DSM 19672]
Length = 448
Score = 337 bits (863), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 169/344 (49%), Positives = 234/344 (68%), Gaps = 4/344 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+G S++ + PTVI+L GLQG GKTT + KLA Y +K G+S +LVA D+YRPAAID
Sbjct: 86 LGSHTSKINLKPNPPTVIMLVGLQGSGKTTTAGKLAKYFQKDGRSTLLVADDIYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL++LG Q+ V+ ++IA +G+++AKK D+VI+DTAGRL ID+ +M ELK
Sbjct: 146 QLIVLGNQLKTDVFYDKESKNATEIAVRGVDQAKKSAKDIVIIDTAGRLHIDEDLMKELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K +NP E+L V DAM GQ+A + FN IGITG I TKLDGD+RGGAALS+ EV+
Sbjct: 206 SIKNAVNPDEILFVADAMIGQDAVNVAKQFNEAIGITGVIFTKLDGDARGGAALSIMEVT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE+++ E F+PDRMA RILGMGDV++ VE AQE + E+A+EM K+
Sbjct: 266 GVPIKFVGIGEKLDAFELFHPDRMASRILGMGDVVTLVEMAQEAIDAEEAKEMATKVGKT 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
DFND L+Q R + +MGS+ ++ +IPG+ + V +K K +EA+I +MTPEER
Sbjct: 326 GLDFNDLLQQFRMIKKMGSLESIMKLIPGLSAMPDLNVD--DKQFKRIEAIIYSMTPEER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+K ++ S R+KR+A+ SG T V++L+ QL QM +K
Sbjct: 384 KKAHIINGS--RKKRIAKGSGTTVNDVNKLIMQLEQMNKMLKKF 425
>gi|387780346|ref|YP_005755144.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus LGA251]
gi|344177448|emb|CCC87916.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus LGA251]
Length = 455
Score = 337 bits (863), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 166/346 (47%), Positives = 249/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI
Sbjct: 87 MGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 NQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K+VK + P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V
Sbjct: 207 KEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERNNPDTLNVS--RKKRIAKGSGRSIQEVNRLMKQFNDMKKMMKQF 430
>gi|373106124|ref|ZP_09520428.1| signal recognition particle protein [Stomatobaculum longum]
gi|371653220|gb|EHO18624.1| signal recognition particle protein [Stomatobaculum longum]
Length = 450
Score = 337 bits (863), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 177/350 (50%), Positives = 244/350 (69%), Gaps = 6/350 (1%)
Query: 1 MGGEVSELVFAKSRP-TVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAI 59
MG E +E+ A+ R TVIL+AGLQG GKTT +AKLA LK +G +L A DVYRPAAI
Sbjct: 87 MGSETTEIKMAQDRDITVILMAGLQGAGKTTTAAKLAGKLKAKGHRPLLAACDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL + GE+VGVPV++ G+ V P IA+ E+A++ + D++IVDTAGRLQID+ MM+EL
Sbjct: 147 EQLRVNGEKVGVPVFSMGSGVDPVNIARAAFEKARQDHNDILIVDTAGRLQIDEQMMEEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K L LL VDAMTGQEA + TF ++G+ G I+TKLDGD+RGGAALS+K V
Sbjct: 207 GRIKEALRADWTLLTVDAMTGQEAVNVAKTFEDKVGVDGVIVTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPI VG GE++ DLE FYPDRMA RILGMGD+LS +EKAQ + + +A M +K+
Sbjct: 267 TGKPILFVGMGEKLSDLEQFYPDRMASRILGMGDILSLIEKAQAEVDEAEARRMSEKLKK 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
A FDFNDFL Q + V ++G ++ ++ M+P G P ++ E+ + +EAMI +M+ EE
Sbjct: 327 AEFDFNDFLDQMKQVKKLGGIAGIMAMMPTAGASMP-EIDESH--MGRVEAMILSMSKEE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME 349
R P +L +P R+ R+A+ +G +V+++V Q QMR MK L G+M+
Sbjct: 384 RANPSIL--NPSRKNRIARGAGVDINEVNRMVKQFEQMRKMMKQLPGMMK 431
>gi|148544379|ref|YP_001271749.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Lactobacillus reuteri DSM 20016]
gi|184153743|ref|YP_001842084.1| signal recognition particle protein [Lactobacillus reuteri JCM
1112]
gi|227363196|ref|ZP_03847330.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus reuteri
MM2-3]
gi|325682699|ref|ZP_08162215.1| signal recognition particle protein [Lactobacillus reuteri MM4-1A]
gi|148531413|gb|ABQ83412.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Lactobacillus reuteri DSM 20016]
gi|183225087|dbj|BAG25604.1| signal recognition particle protein [Lactobacillus reuteri JCM
1112]
gi|227071802|gb|EEI10091.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus reuteri
MM2-3]
gi|324977049|gb|EGC14000.1| signal recognition particle protein [Lactobacillus reuteri MM4-1A]
Length = 481
Score = 337 bits (863), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 175/364 (48%), Positives = 245/364 (67%), Gaps = 13/364 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L A PTVI++ GLQG GKTT + KLA LK + + M +A DVYRPAAI
Sbjct: 87 MGEEAVPLNKAPHIPTVIMMVGLQGAGKTTTAGKLALRLKNENHARPMFIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL + +Q+ VPV+ GT+V P +I ++G+E A+K + D VI+DTAGRLQID+ +MDEL
Sbjct: 147 TQLQQVADQIDVPVFEKGTDVDPVEIVREGMEVAQKNHNDYVIIDTAGRLQIDEQLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++K ++NP E+LLV+D+MTGQ A F+ ++ ITG ILTKLDGD+RGGAA+S++ V
Sbjct: 207 ANIKELVNPNEILLVIDSMTGQNAVNTAQGFDDKLDITGVILTKLDGDTRGGAAMSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG GE+MEDL+ F+PDRMA RILGMGD+++ +EKAQ+ +E A+E K+
Sbjct: 267 TGKPIKFVGEGEKMEDLDVFHPDRMASRILGMGDMMTLIEKAQKNFDEEQAQETMDKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FD+NDFL Q V +MG + +I M+PGM PA + K + A++ +MTP
Sbjct: 327 NTFDYNDFLAQMDQVTKMGPLENIIKMMPGMAN-NPALKNLNLDPKQFAHIRAIVLSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-------NLMGVMEG 350
EERE P+++ +P RR+R+A +G+ +V++++ Q QMR MK N M M G
Sbjct: 386 EERENPDIM--NPSRRRRLAAGAGRPIVEVNRMIKQFNQMRKMMKQVTNGNFNGMQNMFG 443
Query: 351 GSLP 354
G +P
Sbjct: 444 GQMP 447
>gi|329115921|ref|ZP_08244638.1| signal recognition particle protein [Streptococcus parauberis NCFD
2020]
gi|326906326|gb|EGE53240.1| signal recognition particle protein [Streptococcus parauberis NCFD
2020]
gi|456370942|gb|EMF49838.1| Signal recognition particle [Streptococcus parauberis KRS-02109]
gi|457095553|gb|EMG26037.1| Signal recognition particle [Streptococcus parauberis KRS-02083]
Length = 524
Score = 337 bits (863), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 166/347 (47%), Positives = 240/347 (69%), Gaps = 4/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E SE+V + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETSEIVKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GT+ +I +GLE+A++ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTDHSAVEIVTKGLEQARENRNDYVLIDTAGRLQIDEKLMGEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLV+D+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E+
Sbjct: 207 RDVKALAQPNEILLVIDSMIGQEAANVADEFNKQLEITGVVLTKIDGDTRGGAALSVREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G+PIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + Q+ + E+ +K+
Sbjct: 267 TGRPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDQQKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF+ Q V MG M ++ MIPGM G A ++ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIAQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDEKQIARKRAIVSSMTPT 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM 345
ERE PELL +P RR+R+A SG T +V++ + Q + M+ +M
Sbjct: 387 ERENPELL--NPSRRRRIASGSGNTFVEVNKFIKDFNQAKTMMQGMM 431
>gi|450132637|ref|ZP_21870177.1| signal recognition particle protein [Streptococcus mutans NLML8]
gi|449152802|gb|EMB56500.1| signal recognition particle protein [Streptococcus mutans NLML8]
Length = 516
Score = 337 bits (863), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 169/354 (47%), Positives = 244/354 (68%), Gaps = 11/354 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK---ITPAQVREAEKSLKIMEAMIEAMT 296
+FDFNDF++Q V MG M ++ MIPGM ++ +V E E + K A++ +MT
Sbjct: 327 NSFDFNDFIEQLDQVQNMGPMEDILKMIPGMANNSALSNVKVDEGEIARK--RAIVSSMT 384
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
PEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 385 PEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|417989876|ref|ZP_12630374.1| signal recognition particle, subunit Ffh [Lactobacillus casei
A2-362]
gi|410537018|gb|EKQ11600.1| signal recognition particle, subunit Ffh [Lactobacillus casei
A2-362]
Length = 478
Score = 337 bits (863), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 174/361 (48%), Positives = 246/361 (68%), Gaps = 8/361 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG L A PTVI++AGLQG GKTT KL+ YL + +L+A DVYRPAAI
Sbjct: 87 MGEAAVPLNKAPHIPTVIMMAGLQGAGKTTTVGKLSKYLMDNDSARPLLIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ VPV+ GT+V P +I +QGL AK+ D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLQTIGKQLNVPVFEMGTDVDPVEIVRQGLATAKENKNDYVLIDTAGRLQIDEKLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K++K + +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KNIKELAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KA ++ A EM +KI
Sbjct: 267 TGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAXXNYDEKQAMEMAEKIRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
+FDFNDFL Q +++MG + ++ MIPGM A V+ K + M+A++ +MTP+
Sbjct: 327 NSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVYSMTPQ 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSN 358
ERE P+LL +P RR+R+A SG+ +V++++ Q Q K +M M G++ L
Sbjct: 387 EREDPDLL--NPSRRRRLAAGSGRPVVEVNRMIKQFNQ----SKQMMNQMSKGNMKGLDG 440
Query: 359 L 359
L
Sbjct: 441 L 441
>gi|399923725|ref|ZP_10781083.1| signal recognition particle protein [Peptoniphilus rhinitidis 1-13]
Length = 445
Score = 337 bits (863), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 172/344 (50%), Positives = 235/344 (68%), Gaps = 3/344 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG +L +K + TVI++ GLQG GKTT S KLAN LKK GK +LVA DVYRPAAI
Sbjct: 87 MGTNEVKLDLSK-KTTVIMMCGLQGAGKTTTSGKLANKLKKDGKRPLLVACDVYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G+ V PV+T G ++ P I+K LE AKK DVVI+DTAGRL ID+ +M EL+
Sbjct: 146 QLQVVGKSVDTPVFTMGDKISPVDISKAALEHAKKNGNDVVIIDTAGRLHIDEKLMKELQ 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+ +NP+EVLLV+DAMTGQ+A + TF+ + +TG ILTKLDGD+RGGAALS++ V+
Sbjct: 206 DIHEEINPSEVLLVLDAMTGQDAVNVADTFDDMLKLTGVILTKLDGDARGGAALSIRSVT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
PIK + GE+M+++E F+PDRMA RILGMGDVLS +EKAQ + + A+E+++K+ +
Sbjct: 266 DVPIKFIASGEKMDNIEVFHPDRMASRILGMGDVLSLIEKAQNAVDDKKAKELEEKLRKS 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F F DFL Q + + MG + +IGMIPG+ + E +EA+I +MT +ER
Sbjct: 326 TFTFEDFLDQMQQMKNMGPLEDIIGMIPGVDNKALKNINLPENEFAKVEAIILSMTKKER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
KPE++ S RRKR+A+ SG + V++L+ Q MR MK
Sbjct: 386 LKPEIIDSS--RRKRIAKGSGTSPADVNKLIKQFKDMRKMMKQF 427
>gi|415691086|ref|ZP_11453325.1| hypothetical protein CGSSa03_05784 [Staphylococcus aureus subsp.
aureus CGS03]
gi|315131030|gb|EFT87014.1| hypothetical protein CGSSa03_05784 [Staphylococcus aureus subsp.
aureus CGS03]
Length = 455
Score = 337 bits (863), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 166/346 (47%), Positives = 249/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI
Sbjct: 87 MGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 NQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K+VK + P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V
Sbjct: 207 KEVKEIAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRV 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|255037144|ref|YP_003087765.1| signal recognition particle protein [Dyadobacter fermentans DSM
18053]
gi|254949900|gb|ACT94600.1| signal recognition particle protein [Dyadobacter fermentans DSM
18053]
Length = 440
Score = 337 bits (863), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 176/353 (49%), Positives = 239/353 (67%), Gaps = 4/353 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG +E + K P VIL+AGLQG GKTT S KLA+ LKKQG+ +L A DVYRPAAID
Sbjct: 86 MGGN-AEGINIKGDPAVILIAGLQGSGKTTFSGKLASLLKKQGRQVLLTACDVYRPAAID 144
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+GV VY+ IA+ + AKK +VIVDTAGRL +D+ MM E++
Sbjct: 145 QLKVLGEQIGVEVYSEPENKNAVSIAQNAVSHAKKSGKKIVIVDTAGRLAVDEVMMKEVE 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K + P+E+L VVD+MTGQ+A TFN + G +LTKLDGD+RGGAALS+++V
Sbjct: 205 DIKTSVKPSEILFVVDSMTGQDAVNTAKTFNERLDFDGVVLTKLDGDARGGAALSIRQVV 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK + GE+ME L+ FYPDRMA RILGMGDV+S VE+AQ+ +++A+ + K+
Sbjct: 265 EKPIKYISTGEKMEALDSFYPDRMASRILGMGDVISLVERAQQAFDEDEAKRINAKMRQN 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF+DFL Q + + +MG++ +IGMIPGMG + E S K +EA+I++MT +ER
Sbjct: 325 KFDFDDFLGQLQQIKKMGNVKDLIGMIPGMGSAIKNLDIDNE-SFKPIEAIIQSMTKKER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 353
E P+++ S R+KR+A SG T QV+ L+ Q +MR MK + + G L
Sbjct: 384 ENPDIIDGS--RKKRIAAGSGTTILQVNNLIKQFDEMRKMMKKMNTMQAAGKL 434
>gi|329962381|ref|ZP_08300385.1| signal recognition particle protein [Bacteroides fluxus YIT 12057]
gi|328530104|gb|EGF56989.1| signal recognition particle protein [Bacteroides fluxus YIT 12057]
Length = 440
Score = 337 bits (863), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 175/357 (49%), Positives = 242/357 (67%), Gaps = 5/357 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE +E+ S+P VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI
Sbjct: 86 MGGETAEINI-DSKPAVILMSGLQGSGKTTFSGKLARMLKSKKNRKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +L EQ+ VP+Y+ P +IA+ + EAK K D+VIVDTAGRL +D+ MM+E+
Sbjct: 145 EQLRVLAEQIEVPMYSEPDSKDPVRIAQNAILEAKAKGYDLVIVDTAGRLAVDEEMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K+ +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 AAIKKAINPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAALSIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VNKPIKFVGTGEKLDAIDQFHPSRMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTPEE
Sbjct: 325 NQFDFNDFLSQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPEE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 356
R P +L S RR+R+A+ SG Q+V++L+ Q Q R MK + G G +P L
Sbjct: 384 RSNPAILNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTGSKMGKMMPKL 438
>gi|319892235|ref|YP_004149110.1| signal recognition particle subunit Ffh SRP54 [Staphylococcus
pseudintermedius HKU10-03]
gi|317161931|gb|ADV05474.1| Signal recognition particle, subunit Ffh SRP54 [Staphylococcus
pseudintermedius HKU10-03]
Length = 455
Score = 337 bits (863), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 166/346 (47%), Positives = 250/346 (72%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGG+ + + AK PTV+++ GLQG GKTT + KLA + KK K +LVAGD+YRPAAI
Sbjct: 87 MGGDNTSITMAKKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPLLVAGDIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ +PVY+ G +V P QI + L+ AK +++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 NQLQTVGKQIDIPVYSEGDQVPPQQIVQNALQHAKAEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++VK + P E++LVVDAMTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V
Sbjct: 207 QEVKEISKPDEIMLVVDAMTGQDAVNVAESFDQQLDVTGVTLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + +E A +++KK+ +
Sbjct: 267 TEKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDEEKARDLEKKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F DFL+Q V +G + ++ MIPGM K+ ++ ++K + ++A+I++MTPE
Sbjct: 327 SSFTLEDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ERE P+ L S R++R+A SG+T Q+V++L+ Q M+ MK
Sbjct: 387 ERENPDKLNVS--RKRRIAAGSGRTLQEVNRLLKQFNDMKKMMKQF 430
>gi|450175644|ref|ZP_21885302.1| signal recognition particle protein [Streptococcus mutans SM1]
gi|449246445|gb|EMC44749.1| signal recognition particle protein [Streptococcus mutans SM1]
Length = 516
Score = 336 bits (862), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 167/352 (47%), Positives = 242/352 (68%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
+FDFNDF++Q V MG M ++ MIPGM + + V+ E + A++ +MTPE
Sbjct: 327 NSFDFNDFIEQLDQVQNMGPMEDILKMIPGMANNSALSNVKVDEDEIARKRAIVSSMTPE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 387 ERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|379727454|ref|YP_005319639.1| signal recognition particle protein [Melissococcus plutonius
DAT561]
gi|376318357|dbj|BAL62144.1| signal recognition particle protein [Melissococcus plutonius
DAT561]
Length = 471
Score = 336 bits (862), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 168/337 (49%), Positives = 241/337 (71%), Gaps = 6/337 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G E L A PT+I++AGLQG GKTT + KLANYL KQ + +++A DVYRPAAI
Sbjct: 87 LGSEAVGLNKAPKIPTIIMMAGLQGAGKTTFTGKLANYLIKQENARPLMIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +LG+Q+ VPV+ GTE+ P +I +QG+ AK+K D V++DTAGRL ID+A+MDEL
Sbjct: 147 EQLKVLGQQLDVPVFDKGTEINPVEIVRQGIALAKEKKNDYVLIDTAGRLHIDEALMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K + P E+LLVVDAMTGQ+A + +FN ++GITG ++TKLD D+RGGAALS++ V
Sbjct: 207 KQIKELAQPNEILLVVDAMTGQDAVNVAESFNQQLGITGVVITKLDSDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PIK VG GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+ KK+
Sbjct: 267 TGAPIKYVGSGEKLTDLEVFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELAKKMNE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
F+FNDF++Q V MG + ++ MIPGM + P ++ K ++ A++ +MTP
Sbjct: 327 NRFNFNDFIEQLDQVMGMGPLEDLVKMIPGMNNM-PGMDNIKVDPKDIERKRAIVFSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
ERE P+LL +P RR+R+A SG + +V++++ Q
Sbjct: 386 AERENPDLL--NPSRRRRIAAGSGNSVIEVNRMIKQF 420
>gi|366089288|ref|ZP_09455761.1| signal recognition particle protein [Lactobacillus acidipiscis KCTC
13900]
Length = 477
Score = 336 bits (862), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 168/347 (48%), Positives = 245/347 (70%), Gaps = 8/347 (2%)
Query: 15 PTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPV 73
PTVI++ GLQG GKTT ++KLA LK +Q +++A DVYRPAAIDQL LG + +PV
Sbjct: 101 PTVIMMVGLQGAGKTTTASKLALKLKNEQNARPLMIAADVYRPAAIDQLKTLGAENDLPV 160
Query: 74 YTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLL 133
+ GT+V P +I ++GL+ A++ D V +DTAGRLQID+ +M EL D++++ +P EVLL
Sbjct: 161 FDMGTDVSPVKIVEEGLKVAEENKNDYVFIDTAGRLQIDEKLMQELADIQKLASPDEVLL 220
Query: 134 VVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERM 193
VD+MTGQ A + FN ++ ITG ILTKLDGD+RGGAALS++ V+GKPIK +G+GE+M
Sbjct: 221 TVDSMTGQNATEVAEGFNEQLNITGVILTKLDGDTRGGAALSIRAVTGKPIKFIGQGEKM 280
Query: 194 EDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRT 253
DL+ FYPDRMA RILGMGD+++ +EKAQ ++ A+++Q+K+ + FDFNDFL+Q
Sbjct: 281 ADLDVFYPDRMASRILGMGDMMTLIEKAQRDYDEKKAQDLQEKMRANTFDFNDFLEQLDQ 340
Query: 254 VARMGSMSRVIGMIPGMGKITPAQVREAE-KSLKIMEAMIEAMTPEEREKPELLAESPVR 312
V MGSM ++ MIPGM + + + K + +A++ +MTP+ERE P++L P R
Sbjct: 341 VQNMGSMEDIMKMIPGMANNSALKNASIDPKDMDHTKAIVYSMTPQEREDPDIL--KPSR 398
Query: 313 RKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 359
R+R+A SG++ Q+V++L+ Q QMR ++M + G+ + NL
Sbjct: 399 RRRIAAGSGRSVQEVNRLIKQFKQMR----DMMAKVSNGNFSGMENL 441
>gi|386728920|ref|YP_006195303.1| Signal recognition particle, subunit FFH/SRP54 [Staphylococcus
aureus subsp. aureus 71193]
gi|418980058|ref|ZP_13527846.1| Signal recognition particle, subunit FFH/Srp54 [Staphylococcus
aureus subsp. aureus DR10]
gi|379992221|gb|EIA13678.1| Signal recognition particle, subunit FFH/Srp54 [Staphylococcus
aureus subsp. aureus DR10]
gi|384230213|gb|AFH69460.1| Signal recognition particle, subunit FFH/SRP54 [Staphylococcus
aureus subsp. aureus 71193]
Length = 461
Score = 336 bits (862), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 166/346 (47%), Positives = 249/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI
Sbjct: 93 MGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAI 152
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+EL
Sbjct: 153 NQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNEL 212
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K+VK + P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V
Sbjct: 213 KEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSV 272
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 273 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRE 332
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP
Sbjct: 333 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPA 392
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 393 ERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 436
>gi|218132452|ref|ZP_03461256.1| hypothetical protein BACPEC_00311 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992562|gb|EEC58564.1| signal recognition particle protein [[Bacteroides] pectinophilus
ATCC 43243]
Length = 452
Score = 336 bits (862), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 175/355 (49%), Positives = 245/355 (69%), Gaps = 8/355 (2%)
Query: 1 MGGEVSELVF-AKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAI 59
MG E +E+ + S TVI++AGLQG GKTT +AKLA K QG+ +LVA DVYRPAA+
Sbjct: 87 MGSETTEIALKSGSEITVIMMAGLQGAGKTTTTAKLAGKFKAQGRKPLLVACDVYRPAAV 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL I GE+ GVPV+ GT P IAK G+E AK ++VI+DTAGRL +D+ MM EL
Sbjct: 147 EQLKINGEKQGVPVFAMGTNQNPVDIAKAGIEHAKSNGNNIVILDTAGRLHVDEDMMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+++K + + +LVVD+MTGQ+A + ++F+ +IGI G ILTKLDGD+RGGAALS+K V
Sbjct: 207 QNIKSSVGVDQTILVVDSMTGQDAVNVASSFDEKIGIDGVILTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPI G GE++ DLE F+PDRMA RILGMGDVLS +EKA+ + + A EM+KK+
Sbjct: 267 TGKPILYAGMGEKLSDLEQFHPDRMASRILGMGDVLSLIEKAEAQIDADKAAEMEKKLRK 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-----KITPAQVREAEKSLKIMEAMIEA 294
A FDFND+L+ + MG + ++ M+PGMG K + EAEK+LK EA+I +
Sbjct: 327 AEFDFNDYLEYMGQIKNMGGLGSIMNMLPGMGFAGKIKTDGVDMDEAEKNLKRTEAIILS 386
Query: 295 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME 349
M ER +P++L +P R+ R+A+ +G +V+++V Q QM+ MK + G+M+
Sbjct: 387 MNNAERSRPDIL--NPSRKNRIARGAGVDISEVNRVVKQFEQMKKMMKQMPGMMK 439
>gi|218130040|ref|ZP_03458844.1| hypothetical protein BACEGG_01625 [Bacteroides eggerthii DSM 20697]
gi|317476534|ref|ZP_07935781.1| signal recognition particle protein [Bacteroides eggerthii
1_2_48FAA]
gi|217987760|gb|EEC54087.1| signal recognition particle protein [Bacteroides eggerthii DSM
20697]
gi|316907277|gb|EFV28984.1| signal recognition particle protein [Bacteroides eggerthii
1_2_48FAA]
Length = 440
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 175/357 (49%), Positives = 241/357 (67%), Gaps = 5/357 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE +E+ S+P VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI
Sbjct: 86 MGGETAEINI-DSKPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +L EQ+ VP+Y+ P IA+ ++EAK K D+VIVDTAGRL +D+ MM+E+
Sbjct: 145 EQLRVLAEQIEVPMYSEPDSKNPVAIAQNAIQEAKAKGYDLVIVDTAGRLAVDEEMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 AAIKAAINPNEILFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAALSIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTPEE
Sbjct: 325 NQFDFNDFLNQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPEE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 356
R P +L S RR+R+A+ SG Q+V++L+ Q Q R MK + G G +P L
Sbjct: 384 RSNPAILNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTGSKMGKMMPKL 438
>gi|213962455|ref|ZP_03390717.1| signal recognition particle protein [Capnocytophaga sputigena
Capno]
gi|213954781|gb|EEB66101.1| signal recognition particle protein [Capnocytophaga sputigena
Capno]
Length = 442
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/335 (51%), Positives = 238/335 (71%), Gaps = 5/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSC-MLVAGDVYRPAAI 59
MGG+ + + + PT+IL++GLQG GKTT S KLANYLK + +LVA DVYRPAAI
Sbjct: 86 MGGDAAGINLS-GNPTIILMSGLQGSGKTTFSGKLANYLKNKKNKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL I+GEQVGVPV++ P IA++G++ AK+ +++VVIVDTAGRL +D+ MM E+
Sbjct: 145 DQLHIVGEQVGVPVFSDKGNSNPVDIAQKGVQYAKENHLNVVIVDTAGRLAVDEQMMTEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++ + LNP E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAA+++K V
Sbjct: 205 SNIHKALNPQETLFVVDAMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAAITIKSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+M+ ++ FYP+RMA RILGMGDV+S VE+AQE +E A ++QKKI
Sbjct: 265 VNKPIKFVGTGEKMDAIDVFYPERMADRILGMGDVVSLVERAQEQFDEEQARKLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFL+Q + + RMGSM ++GM+PG+GK + + + K +EA+I +MTP+E
Sbjct: 325 NQFGFDDFLEQIQQIKRMGSMKDLLGMLPGVGKAVK-DLDIKDDAFKHIEAIIHSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
R P ++ S R+KR+A+ SG+ Q+V+QL+ Q
Sbjct: 384 RSTPAIIDLS--RKKRIAKGSGRDIQEVNQLMKQF 416
>gi|429752041|ref|ZP_19284928.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
326 str. F0382]
gi|429178225|gb|EKY19508.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
326 str. F0382]
Length = 444
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/335 (51%), Positives = 239/335 (71%), Gaps = 5/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSC-MLVAGDVYRPAAI 59
MGG+ + + + PTVIL++GLQG GKTT S KLANYLK + +LVA DVYRPAAI
Sbjct: 86 MGGDAAGVNLS-GNPTVILMSGLQGSGKTTFSGKLANYLKNKKNKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL I+GEQVGVPV++ P IA++G++ AK+ +++VVI+DTAGRL +D+ MM+E+
Sbjct: 145 DQLHIVGEQVGVPVFSDKDNNNPVDIAQKGVQYAKENHLNVVIIDTAGRLAVDEQMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++ + LNP E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAA+++K V
Sbjct: 205 SNIHKALNPQETLFVVDAMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAAITIKSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+M+ ++ FYP+RMA RILGMGDV+S VE+AQE +E A ++QKKI
Sbjct: 265 VNKPIKFVGTGEKMDAIDVFYPERMADRILGMGDVVSLVERAQEQFDEEQARKLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFL+Q + + RMGSM ++GM+PG+GK + + + K +EA+I +MTP+E
Sbjct: 325 NQFGFDDFLEQIQQIKRMGSMKDLLGMLPGVGKAVK-DLDIKDDAFKHIEAIIHSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
R P ++ + R+KR+A+ SG+ Q+V+QL+ Q
Sbjct: 384 RSTPAIIDLN--RKKRIAKGSGRDIQEVNQLMKQF 416
>gi|408492133|ref|YP_006868502.1| signal recognition particle, subunit SRP54 Ffh [Psychroflexus
torquis ATCC 700755]
gi|408469408|gb|AFU69752.1| signal recognition particle, subunit SRP54 Ffh [Psychroflexus
torquis ATCC 700755]
Length = 442
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/335 (51%), Positives = 234/335 (69%), Gaps = 5/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG+ E+ + P+VIL++GLQG GKTT S KLANYLK K+ K +LVA DVYRPAAI
Sbjct: 86 MGGDAEEVDLS-GNPSVILMSGLQGSGKTTFSGKLANYLKSKKSKQPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ++G+Q+GV V++ E P IA+ + AK+ +VVI+DTAGRL +D+ MM+E+
Sbjct: 145 DQLHVVGDQIGVEVFSNKEEKNPVLIAEAAIAHAKQNGHNVVILDTAGRLAVDQVMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
D+ + + P E L VVDAMTGQ+A TFN + G ILTKLDGD+RGGAA+S+K V
Sbjct: 205 SDIYKAVKPQETLFVVDAMTGQDAVNTAKTFNDVLDFDGVILTKLDGDTRGGAAISIKSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+M+ ++ FYP RMA RILGMGDV+S VE+AQE +++A ++QKKI
Sbjct: 265 VNKPIKFIGTGEKMDAIDVFYPSRMADRILGMGDVVSLVERAQEQYDEDEARKIQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFLKQ + V +MGSM ++GMIPG GK+ + + + K +EAMI +MTP E
Sbjct: 325 DKFGFDDFLKQIQQVKKMGSMKDLMGMIPGAGKMMK-NMDIDDDAFKHIEAMIHSMTPHE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
RE P + S R+KR+ + SG + Q+V+QL+ Q
Sbjct: 384 RENPTSINAS--RKKRIGKGSGTSVQEVNQLLKQF 416
>gi|423511879|ref|ZP_17488410.1| signal recognition particle protein [Bacillus cereus HuA2-1]
gi|402450140|gb|EJV81974.1| signal recognition particle protein [Bacillus cereus HuA2-1]
Length = 449
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/351 (49%), Positives = 249/351 (70%), Gaps = 8/351 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI
Sbjct: 87 MGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +M EL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMGEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V
Sbjct: 207 AKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMT 296
+F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT
Sbjct: 327 LSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMT 384
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 385 KIEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|450124877|ref|ZP_21867296.1| signal recognition particle protein [Streptococcus mutans U2A]
gi|449233422|gb|EMC32498.1| signal recognition particle protein [Streptococcus mutans U2A]
Length = 516
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 167/352 (47%), Positives = 242/352 (68%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
+FDFNDF++Q V MG M ++ MIPGM + + V+ E + A++ +MTPE
Sbjct: 327 NSFDFNDFIEQLDQVQNMGPMEDILKMIPGMANNSALSNVKVDEDEIARKRAIVSSMTPE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 387 ERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|418906172|ref|ZP_13460199.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|377765472|gb|EHT89322.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC345D]
Length = 455
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 166/346 (47%), Positives = 249/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI
Sbjct: 87 MGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 NQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K+VK + P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V
Sbjct: 207 KEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPV 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|375256538|ref|YP_005015705.1| signal recognition particle protein [Tannerella forsythia ATCC
43037]
gi|363408351|gb|AEW22037.1| signal recognition particle protein [Tannerella forsythia ATCC
43037]
Length = 442
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 178/354 (50%), Positives = 239/354 (67%), Gaps = 5/354 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG +E S P+VIL+AGLQG GKTT S KLAN LK K+GK+ +LVA DVYRPAAI
Sbjct: 86 MGGTAAEFNLTGS-PSVILMAGLQGSGKTTFSGKLANMLKSKRGKNPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +LGEQ+GVPVY+ P IA + EAKK D+VIVDTAGRL ID+ MM E+
Sbjct: 145 DQLYVLGEQIGVPVYSERENKNPVDIALHAILEAKKTGRDLVIVDTAGRLAIDEQMMAEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K+ + P E+L VVD+MTGQ+A FN + +G +LTKLDGD+RGGAALS++ V
Sbjct: 205 AAIKKAIRPNEILFVVDSMTGQDAVNTAKEFNDRLDFSGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+M+ L+ F+P+RMA RILGMGDV+S VE+AQE + +A +QKK+
Sbjct: 265 VDKPIKFIGTGEKMDALDVFHPERMADRILGMGDVVSLVERAQEQYDEAEARRIQKKLAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + + +MG++ + MIPG+GK + E + K +EA+I +MTP+E
Sbjct: 325 NQFDFNDFLGQIQQIKKMGNLKDLASMIPGVGKALK-NIDIDENAFKGIEAIIYSMTPQE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 353
R P +L S RR+R+A SG + Q V++L+ Q + R M+ + V G +
Sbjct: 384 RTNPSILNGS--RRQRIAAGSGTSVQDVNKLIKQFDETRKMMRMITTVKPGSRM 435
>gi|16803841|ref|NP_465326.1| hypothetical protein lmo1801 [Listeria monocytogenes EGD-e]
gi|47097384|ref|ZP_00234935.1| signal recognition particle protein [Listeria monocytogenes str.
1/2a F6854]
gi|254912359|ref|ZP_05262371.1| signal recognition particle protein [Listeria monocytogenes J2818]
gi|254936686|ref|ZP_05268383.1| signal recognition particle protein [Listeria monocytogenes F6900]
gi|284802247|ref|YP_003414112.1| hypothetical protein LM5578_2003 [Listeria monocytogenes 08-5578]
gi|284995389|ref|YP_003417157.1| hypothetical protein LM5923_1954 [Listeria monocytogenes 08-5923]
gi|386044109|ref|YP_005962914.1| signal recognition particle protein [Listeria monocytogenes 10403S]
gi|386047453|ref|YP_005965785.1| signal recognition particle protein [Listeria monocytogenes J0161]
gi|386050778|ref|YP_005968769.1| signal recognition particle protein [Listeria monocytogenes FSL
R2-561]
gi|386054056|ref|YP_005971614.1| signal recognition particle protein [Listeria monocytogenes Finland
1998]
gi|404284297|ref|YP_006685194.1| signal recognition particle protein [Listeria monocytogenes
SLCC2372]
gi|404411102|ref|YP_006696690.1| signal recognition particle protein [Listeria monocytogenes
SLCC5850]
gi|404413880|ref|YP_006699467.1| signal recognition particle protein [Listeria monocytogenes
SLCC7179]
gi|405758852|ref|YP_006688128.1| signal recognition particle protein [Listeria monocytogenes
SLCC2479]
gi|16411255|emb|CAC99879.1| ffh [Listeria monocytogenes EGD-e]
gi|47014232|gb|EAL05214.1| signal recognition particle protein [Listeria monocytogenes str.
1/2a F6854]
gi|258609282|gb|EEW21890.1| signal recognition particle protein [Listeria monocytogenes F6900]
gi|284057809|gb|ADB68750.1| hypothetical protein LM5578_2003 [Listeria monocytogenes 08-5578]
gi|284060856|gb|ADB71795.1| hypothetical protein LM5923_1954 [Listeria monocytogenes 08-5923]
gi|293590340|gb|EFF98674.1| signal recognition particle protein [Listeria monocytogenes J2818]
gi|345534444|gb|AEO03885.1| signal recognition particle protein [Listeria monocytogenes J0161]
gi|345537343|gb|AEO06783.1| signal recognition particle protein [Listeria monocytogenes 10403S]
gi|346424624|gb|AEO26149.1| signal recognition particle protein [Listeria monocytogenes FSL
R2-561]
gi|346646707|gb|AEO39332.1| signal recognition particle protein [Listeria monocytogenes Finland
1998]
gi|404230928|emb|CBY52332.1| signal recognition particle protein [Listeria monocytogenes
SLCC5850]
gi|404233799|emb|CBY55202.1| signal recognition particle protein [Listeria monocytogenes
SLCC2372]
gi|404236734|emb|CBY58136.1| signal recognition particle protein [Listeria monocytogenes
SLCC2479]
gi|404239579|emb|CBY60980.1| signal recognition particle protein [Listeria monocytogenes
SLCC7179]
gi|441471557|emb|CCQ21312.1| Signal recognition particle protein [Listeria monocytogenes]
gi|441474688|emb|CCQ24442.1| Signal recognition particle protein [Listeria monocytogenes N53-1]
Length = 450
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/346 (49%), Positives = 248/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI
Sbjct: 87 MGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK++++D VI+DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEEHLDYVIIDTAGRLHIDETLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K VK + PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KQVKEIATPTEILLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK + GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + E + M++K+
Sbjct: 267 TGKPIKFIATGEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAMEQKMKD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
+ +DFL+Q + V +MG + ++ M+PG K+ + +K L +EA+I++MT
Sbjct: 327 NSMTLDDFLEQLQQVKQMGPLDELLKMMPGANKMKGLDNMNVDDKQLGHIEAIIKSMTKN 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E++ P+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 387 EKDNPDIINAS--RRKRIARGSGRPVQEINRLLKQFAEMKKMMKQM 430
>gi|330717910|ref|ZP_08312510.1| signal recognition particle protein [Leuconostoc fallax KCTC 3537]
Length = 492
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/344 (50%), Positives = 238/344 (69%), Gaps = 6/344 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L + PT+I++AGLQG GKTT AKLA LK++ K+ +L+A D+YRPAAI
Sbjct: 87 MGDEAVPLNKSPQIPTIIMMAGLQGAGKTTTVAKLAYKLKQENKARPLLIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ILG+ + +PV++ GT+ P I + GLEEAK+ D V +DTAGRLQID+ +M EL
Sbjct: 147 DQLEILGKDLDIPVFSLGTDTDPRDIVRAGLEEAKQHRNDYVFIDTAGRLQIDEVLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
KD+ + +P E+LL VDAMTGQ A F+ + +TG +LTKLDGD+RGGAALS+++V
Sbjct: 207 KDIAEIAHPDEILLTVDAMTGQNATETAKGFSESLDLTGVVLTKLDGDTRGGAALSIRDV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG+GE+ DL+ FYPDRMA RILGMGD+L+ +EKAQ+ + AE+ +K+
Sbjct: 267 TGKPIKFVGQGEKPTDLDVFYPDRMASRILGMGDMLTLIEKAQKDFDEAAAEKQLEKLRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q + V MG M ++ MIPGM P A + EK +EA++++MTP
Sbjct: 327 NTFDFNDFVAQLKQVQNMGPMEDILKMIPGMAN-NPALANLNVDEKQFIHLEAIVQSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRM 341
ERE P+L+ +P RR+R+A SG+ +V++++ Q QMR M
Sbjct: 386 AEREDPDLI--NPSRRRRLAAGSGRPIVEVNRMIKQFDQMRKMM 427
>gi|423367889|ref|ZP_17345321.1| signal recognition particle protein [Bacillus cereus VD142]
gi|401082750|gb|EJP91015.1| signal recognition particle protein [Bacillus cereus VD142]
Length = 449
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/351 (49%), Positives = 249/351 (70%), Gaps = 8/351 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI
Sbjct: 87 MGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +M EL
Sbjct: 147 KQLETLGKQLDMPVFSLGDKVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMGEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V
Sbjct: 207 AKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMT 296
+F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT
Sbjct: 327 LSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMT 384
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 385 KVEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|303237098|ref|ZP_07323668.1| signal recognition particle protein [Prevotella disiens FB035-09AN]
gi|302482485|gb|EFL45510.1| signal recognition particle protein [Prevotella disiens FB035-09AN]
Length = 447
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 177/360 (49%), Positives = 245/360 (68%), Gaps = 5/360 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE L +++P +IL++GLQG GKTT + KLAN LK K+ K +LVA DVYRPAAI
Sbjct: 86 MGGETVGLTL-ENKPAIILMSGLQGSGKTTFTGKLANLLKTKEHKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL ++GE VGVPVY+ + IA+ + EAK DVVI+DTAGRL +D MM+E+
Sbjct: 145 EQLKVVGESVGVPVYSEPESKDVNAIAEHAIREAKANGNDVVIIDTAGRLAVDTEMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K +NP EVL VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 ESLKNHVNPDEVLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+ME L+ F+P+RMA RILGMGDV+S VE+AQE +E+A+++QKKI
Sbjct: 265 VTKPIKFIGTGEKMEALDVFHPNRMADRILGMGDVVSLVERAQEQFDEEEAKKLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP+E
Sbjct: 325 NKFDFNDFYNQIQQIKKMGNLKDLAAMIPGVGKAI-RDVDIDDNAFKGIEAIIQSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 359
R PE+L S R++R+A+ SG Q+V++LV Q Q R MK + G G + + N+
Sbjct: 384 RTNPEVLNNS--RKQRIAKGSGTNIQEVNRLVKQFDQTRKMMKMVTGSKMAGMMGKMKNM 441
>gi|189459673|ref|ZP_03008458.1| hypothetical protein BACCOP_00301 [Bacteroides coprocola DSM 17136]
gi|189433632|gb|EDV02617.1| signal recognition particle protein [Bacteroides coprocola DSM
17136]
Length = 441
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/347 (50%), Positives = 238/347 (68%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG+ +E+ K RP VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI
Sbjct: 86 MGGDTAEIEL-KGRPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +LG+Q+ VPVY P QIA ++EAK K D+VIVDTAGRL +D+ MM+E+
Sbjct: 145 EQLKVLGQQIEVPVYCELDSKDPVQIALNAIQEAKAKGYDLVIVDTAGRLAVDEQMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K +NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 EAIKNAINPDETLFVVDSMTGQDAVNTAREFNERLDFNGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTPEE
Sbjct: 325 NQFDFNDFLTQIHQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPEE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R PE+L + RR R+A+ SG + Q+V++L+ Q Q R MK + G
Sbjct: 384 RTHPEIL--NGTRRTRIAKGSGTSIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|450046423|ref|ZP_21838937.1| signal recognition particle protein [Streptococcus mutans N34]
gi|449198865|gb|EMB99957.1| signal recognition particle protein [Streptococcus mutans N34]
Length = 516
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 169/353 (47%), Positives = 242/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
+FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|402834421|ref|ZP_10883023.1| signal recognition particle protein [Selenomonas sp. CM52]
gi|402278039|gb|EJU27105.1| signal recognition particle protein [Selenomonas sp. CM52]
Length = 456
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 175/338 (51%), Positives = 236/338 (69%), Gaps = 6/338 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S L + PTVI++AGLQG GKTT + KL LKKQGK +LVA D+YRPAA+
Sbjct: 87 MGGTQSRLNISSVPPTVIMMAGLQGAGKTTSAGKLGLSLKKQGKKPLLVAADIYRPAAVK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+G+PV++ IA+ +E A+ DVVI+DTAGRL ID+ +M ELK
Sbjct: 147 QLQVLGEQLGIPVFSMPQGTDAVTIARSSIEHARSHINDVVIIDTAGRLHIDEKLMQELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K + P E+LLVVDAMTGQ+A + +FN +GI G +LTKLDGD+RGGAALSVK V+
Sbjct: 207 DIKADVKPHEILLVVDAMTGQDAVNVAESFNEGLGIDGVVLTKLDGDARGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE++E LEPF+PDRMA RILGMGDVLS +EKAQ E+A++M+KK+ A
Sbjct: 267 GCPIKFVGMGEKLEALEPFHPDRMASRILGMGDVLSLIEKAQSTFDAEEAKKMEKKLRKA 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEAMIEAMT 296
+F +DFL Q + V ++GS +++GMIPGMG ++ + K ++ +EA+I++MT
Sbjct: 327 DFTLDDFLAQMQKVRKLGSFEQILGMIPGMGGLKKQLQGQDIDLNGKEVRRIEAIIKSMT 386
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
P+ER ++ S RRKR+A SG Q V++L+ Q
Sbjct: 387 PKERADISIINGS--RRKRIALGSGTRVQDVNKLLKQF 422
>gi|408370475|ref|ZP_11168252.1| signal recognition particle protein [Galbibacter sp. ck-I2-15]
gi|407744233|gb|EKF55803.1| signal recognition particle protein [Galbibacter sp. ck-I2-15]
Length = 442
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/335 (51%), Positives = 233/335 (69%), Gaps = 5/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE + + + P+VIL+AGLQG GKTT S KLAN+LK K+ K+ +LVA DVYRPAAI
Sbjct: 86 MGGEAAGVDLS-GNPSVILMAGLQGSGKTTFSGKLANFLKNKKTKNPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ++GEQ+GV VY+ P IAK G++ AK +VVIVDTAGRL +D+ MM E+
Sbjct: 145 DQLHVVGEQIGVSVYSDRENSDPVAIAKAGVDYAKANGHNVVIVDTAGRLAVDELMMKEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++ +NP E L VVD+MTGQ+A +FN + G ILTKLDGD+RGGAALS+K V
Sbjct: 205 SNIHNAINPNETLFVVDSMTGQDAVNTAKSFNDVLDFDGVILTKLDGDTRGGAALSIKSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+M+ ++ FYP RMA RILGMGDV+S VE+AQE +E+A ++ KKI
Sbjct: 265 VNKPIKFIGTGEKMDAVDVFYPSRMADRILGMGDVVSLVERAQEQYDEEEARKLHKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFL Q + + +MGSM ++GMIPG GK + + + K +EA+I +MTPEE
Sbjct: 325 DQFGFDDFLSQIQQIKKMGSMKDLLGMIPGAGKALKGMDID-DDAFKGIEAIIHSMTPEE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
R P +L S R+KR+A+ SG + Q+V+QL+ Q
Sbjct: 384 RSTPSVLNGS--RKKRIAKGSGTSVQEVNQLLKQF 416
>gi|258511333|ref|YP_003184767.1| signal recognition particle protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257478059|gb|ACV58378.1| signal recognition particle protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 479
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/350 (49%), Positives = 244/350 (69%), Gaps = 10/350 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG + + A PTV++L GLQG GKTT +AKLA +Q +LVA DVYRPAA+D
Sbjct: 86 MGGSQARIRMAPKPPTVVMLVGLQGAGKTTTAAKLALAFHQQNHRPLLVAADVYRPAAVD 145
Query: 61 QLVILGEQVGVPVYT---AGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMD 117
QL +LG Q+ VPV++ AG +IA+ GL +A+++ DVVIVDTAGRL ID A+M
Sbjct: 146 QLKVLGAQIDVPVFSLDGAGA----VEIAEAGLRDAERRGADVVIVDTAGRLHIDDALMA 201
Query: 118 ELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVK 177
EL+ +K++L P E+LLVVDAMTGQ+A + F+ + +TG ILTKLDGD+RGGAAL+V+
Sbjct: 202 ELESMKKILEPHEILLVVDAMTGQDAVHVAEAFHQRLEVTGVILTKLDGDARGGAALTVR 261
Query: 178 EVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKI 237
+G PIK VG GE++E LEPF+P+RMA RILGMGDVLS +E+AQE + E A+EM+ ++
Sbjct: 262 AATGCPIKFVGMGEKIEPLEPFHPERMASRILGMGDVLSLIERAQERIDLEKAKEMEARM 321
Query: 238 MSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVRE-AEKSLKIMEAMIEAMT 296
SANF +DF + R V +G + +++ M+PGM ++ + + ++ + +EA+I +MT
Sbjct: 322 RSANFTLDDFQEMFRQVRNLGPLDQILKMLPGMNRVKGLENLDLNDRRFRRLEAIISSMT 381
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
PEER P +L S RR+R+A SG T + V+QL+ Q Q+R MK+L G
Sbjct: 382 PEERRDPSILNAS--RRRRIANGSGTTVRDVNQLINQFEQVREMMKHLTG 429
>gi|449960337|ref|ZP_21810595.1| signal recognition particle protein [Streptococcus mutans 4VF1]
gi|450137749|ref|ZP_21871799.1| signal recognition particle protein [Streptococcus mutans NLML1]
gi|449167693|gb|EMB70560.1| signal recognition particle protein [Streptococcus mutans 4VF1]
gi|449234787|gb|EMC33774.1| signal recognition particle protein [Streptococcus mutans NLML1]
Length = 516
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 169/353 (47%), Positives = 242/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
+FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEDEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|291563269|emb|CBL42085.1| signal recognition particle protein [butyrate-producing bacterium
SS3/4]
Length = 454
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/345 (50%), Positives = 243/345 (70%), Gaps = 4/345 (1%)
Query: 1 MGGEVSELVFA-KSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAI 59
MG E +E+ ++ TVI++ GLQG GKTT +AKLA K +G+ +L A DVYRPAAI
Sbjct: 87 MGSETTEIALKPQNEITVIMMIGLQGAGKTTTTAKLAGKFKAKGRKPLLAACDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL + GE+VGVPV+T G P IAK +E A+K+ +++V +DTAGRLQID++MMDEL
Sbjct: 147 KQLQVNGEKVGVPVFTMGDNQNPVNIAKAAVEHARKEGMNLVFLDTAGRLQIDESMMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++K + + +LVVDAMTGQ+A + +FN +IG+ G ILTKLDGD+RGGAALS++ V
Sbjct: 207 VNIKEAVEIDQTILVVDAMTGQDAVNVAGSFNDKIGVDGVILTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPI VG GE++ DLE FYPDRMA RILGMGD+LS +EKA+ + +E A+EM +K+
Sbjct: 267 TGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDILSLIEKAEFEVSEEKAKEMSQKLRK 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
A FDFNDFL Q R + +MG M+ ++ M+PGM ++ V E+S+ +EA+I +MT E
Sbjct: 327 AEFDFNDFLDQMRQIKKMGGMNSILNMMPGMSQM-KGNVEIDERSMDKVEAIILSMTKGE 385
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
R P LL +P R++R+A+ +G +V+++V Q Q + MK L
Sbjct: 386 RANPSLL--NPSRKQRIAKGAGVDIAEVNRIVKQFEQSKKLMKQL 428
>gi|422882278|ref|ZP_16928734.1| signal recognition particle protein [Streptococcus sanguinis SK355]
gi|332360439|gb|EGJ38250.1| signal recognition particle protein [Streptococcus sanguinis SK355]
Length = 524
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/353 (48%), Positives = 244/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGL++AK + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLDQAKANHNDYVLIDTAGRLQIDEKLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 SDVKALANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 386 AERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|449902748|ref|ZP_21791679.1| signal recognition particle protein [Streptococcus mutans M230]
gi|449975087|ref|ZP_21815612.1| signal recognition particle protein [Streptococcus mutans 11VS1]
gi|450100286|ref|ZP_21858716.1| signal recognition particle protein [Streptococcus mutans SF1]
gi|450122380|ref|ZP_21866721.1| signal recognition particle protein [Streptococcus mutans ST6]
gi|450169747|ref|ZP_21883158.1| signal recognition particle protein [Streptococcus mutans SM4]
gi|449177352|gb|EMB79655.1| signal recognition particle protein [Streptococcus mutans 11VS1]
gi|449220516|gb|EMC20380.1| signal recognition particle protein [Streptococcus mutans SF1]
gi|449227957|gb|EMC27347.1| signal recognition particle protein [Streptococcus mutans ST6]
gi|449246900|gb|EMC45195.1| signal recognition particle protein [Streptococcus mutans SM4]
gi|449262039|gb|EMC59496.1| signal recognition particle protein [Streptococcus mutans M230]
Length = 516
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 167/352 (47%), Positives = 242/352 (68%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
+FDFNDF++Q V MG M ++ MIPGM + + V+ E + A++ +MTPE
Sbjct: 327 NSFDFNDFIEQLDQVQNMGPMEDILKMIPGMANNSALSNVKVDEDEIARKRAIVSSMTPE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 387 ERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|313203704|ref|YP_004042361.1| signal recognition particle subunit ffh/srp54 (srp54) [Paludibacter
propionicigenes WB4]
gi|312443020|gb|ADQ79376.1| signal recognition particle subunit FFH/SRP54 (srp54) [Paludibacter
propionicigenes WB4]
Length = 439
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 181/354 (51%), Positives = 238/354 (67%), Gaps = 7/354 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG ++ K PTVIL++GLQG GKTT S KLAN LK K+ K+ +LVA DVYRPAAI
Sbjct: 86 MGGASVDINL-KGSPTVILMSGLQGSGKTTFSGKLANLLKTKRSKNPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +LGEQ+GVPVY+ P IA+ ++ AK DVVIVDTAGRL +D+AMM+E+
Sbjct: 145 EQLKVLGEQLGVPVYSDLESKNPVSIAEAAIKHAKLHGNDVVIVDTAGRLAVDEAMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K+ +NP E+L VVD+MTGQ+A FN + G ILTKLDGD+RGGAALS++ V
Sbjct: 205 AAIKKAINPQEILFVVDSMTGQDAVNTAKEFNDRLDFDGVILTKLDGDTRGGAALSIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+M+ L+ FYP+RMA RILGMGD++S VE+AQE +EDA +QK+I
Sbjct: 265 VNKPIKFVGTGEKMDALDVFYPERMADRILGMGDIVSLVERAQEQYDEEDARRLQKRIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDF+ Q + + +MG++ + MIPGMGK V + + K +EA+I +MTP E
Sbjct: 325 NQFDFNDFISQIQQIKKMGNIKDLAAMIPGMGK-ALKDVDIDDNAFKGIEAIIHSMTPLE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 353
R P +L S R++R+A SG T V++L+ Q Q MK M M G L
Sbjct: 384 RANPAMLNGS--RKQRIAAGSGTTIVDVNRLLKQFDQTSKMMK--MATMSQGKL 433
>gi|384135024|ref|YP_005517738.1| signal recognition particle protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
gi|339289109|gb|AEJ43219.1| signal recognition particle protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
Length = 479
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/350 (49%), Positives = 245/350 (70%), Gaps = 10/350 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG + + A PT+++L GLQG GKTT +AKLA ++Q +LVA DVYRPAA+D
Sbjct: 86 MGGSQARIRMASKPPTIVMLVGLQGAGKTTTAAKLALAFRQQSHRPLLVAADVYRPAAVD 145
Query: 61 QLVILGEQVGVPVYT---AGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMD 117
QL +LGEQ+ VPV++ AG +IA+ L +A+++ DVVIVDTAGRL ID A+M
Sbjct: 146 QLKVLGEQIDVPVFSFDGAGA----VEIAQAALRDAERRGADVVIVDTAGRLHIDDALMG 201
Query: 118 ELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVK 177
EL+ +K+VL P E+LLVVDAMTGQ+A + F+ + +TG ILTKLDGD+RGGAAL+V+
Sbjct: 202 ELEAMKKVLEPHEILLVVDAMTGQDAVHVAEAFHQRLEVTGVILTKLDGDARGGAALTVR 261
Query: 178 EVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKI 237
+G PIK VG GE++E LEPF+P+RMA RILGMGDVLS +E+AQE + E A+EM+ ++
Sbjct: 262 AATGCPIKFVGMGEKIEPLEPFHPERMASRILGMGDVLSLIERAQERIDLEKAKEMEARM 321
Query: 238 MSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVRE-AEKSLKIMEAMIEAMT 296
SANF +DF + R V +G + +++ M+PGM ++ + + ++ + +EA+I +MT
Sbjct: 322 RSANFTLDDFQEMFRQVRNLGPLDQILKMLPGMNRVKGLENLDLNDRRFRRLEAIISSMT 381
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
PEER P +L S RR+R+A SG T + V+QL+ Q Q+R MK+L G
Sbjct: 382 PEERRDPGILNAS--RRRRIANGSGTTVRDVNQLINQFEQVREMMKHLTG 429
>gi|373495378|ref|ZP_09585963.1| signal recognition particle protein [Eubacterium infirmum F0142]
gi|371964856|gb|EHO82360.1| signal recognition particle protein [Eubacterium infirmum F0142]
Length = 447
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/346 (49%), Positives = 244/346 (70%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S+L ++ S TV+++ GLQG GKTT KLA++LK+ GK MLVA D+YRPAAID
Sbjct: 87 MGGAGSKLTYSPSGFTVLMMVGLQGTGKTTTCGKLASFLKQNGKKPMLVACDIYRPAAID 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G+ V PV+T QIA E+A++K DV+I+DTAGRLQID+++M+EL
Sbjct: 147 QLEVVGKAVNTPVFTMRESKDAVQIALAAKEDAERKGFDVLIIDTAGRLQIDESLMEELA 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E+LLVVDA+TGQ+A FN ++GI G I+TK+DGDSRGGAALS K+V+
Sbjct: 207 SMKSAVRPHEILLVVDALTGQDAVNAADGFNRKLGIDGIIMTKMDGDSRGGAALSAKKVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE+ + LEPF+P+R+A RILGMGD+LS +EKA++ +E AE++++KI
Sbjct: 267 GKPIKFLGTGEKSDALEPFHPERLASRILGMGDMLSLIEKAEQAYDEEQAEKLERKIRKN 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPE 298
F DFL+Q V +MG +++++ M+PGMG KI+ A + + EK + MEA+I +MT
Sbjct: 327 QFTLEDFLEQMGQVRKMGGLAKIMDMLPGMGGAKISEADIEKGEKEFRTMEAIIRSMTVA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER+ P LL S RRKR+A SG+T V++++++ + + MK
Sbjct: 387 ERKNPGLLNAS--RRKRIAAGSGQTVNSVNKVISKYEESKKLMKQF 430
>gi|392428759|ref|YP_006469770.1| signal recognition particle protein [Streptococcus intermedius
JTH08]
gi|419776601|ref|ZP_14302523.1| signal recognition particle protein [Streptococcus intermedius
SK54]
gi|383846012|gb|EID83412.1| signal recognition particle protein [Streptococcus intermedius
SK54]
gi|391757905|dbj|BAM23522.1| signal recognition particle protein [Streptococcus intermedius
JTH08]
Length = 524
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/355 (48%), Positives = 246/355 (69%), Gaps = 13/355 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEAARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV++ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFSLGTEVPAIEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDVKVLAQPNEILLVVDAMIGQEAANVAREFNDQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAM 295
FDFNDF+ Q V MG M ++ MIPGM PA +V E E + K A++ +M
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPAMKNFKVDENEIARK--RAIVSSM 383
Query: 296 TPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
TP ERE P LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 384 TPAERENPNLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSVMQ---GVMSG 433
>gi|386319497|ref|YP_006015660.1| signal recognition particle protein [Staphylococcus
pseudintermedius ED99]
gi|323464668|gb|ADX76821.1| signal recognition particle protein [Staphylococcus
pseudintermedius ED99]
Length = 455
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 166/346 (47%), Positives = 250/346 (72%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGG+ + + AK PTV+++ GLQG GKTT + KLA + KK K +LVAGD+YRPAAI
Sbjct: 87 MGGDNTSITMAKKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPLLVAGDIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ +PVY+ G +V P QI + L+ AK +++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 NQLQTVGKQIDIPVYSEGDQVPPQQIVQNALQHAKAEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++VK + P E++LVVDAMTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V
Sbjct: 207 QEVKEISKPDEIMLVVDAMTGQDAVNVAESFDQQLDVTGVTLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + +E A +++KK+ +
Sbjct: 267 TEKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDEEKARDLEKKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F DFL+Q V +G + ++ MIPGM K+ ++ ++K + ++A+I++MTPE
Sbjct: 327 SSFTLEDFLEQLDQVKSLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ERE P+ L S R++R+A SG+T Q+V++L+ Q M+ MK
Sbjct: 387 ERENPDKLNVS--RKRRIAAGSGRTLQEVNRLLKQFNDMKKMMKQF 430
>gi|449886043|ref|ZP_21785923.1| signal recognition particle protein [Streptococcus mutans SA41]
gi|449915593|ref|ZP_21796362.1| signal recognition particle protein [Streptococcus mutans 15JP3]
gi|449944517|ref|ZP_21806769.1| signal recognition particle protein [Streptococcus mutans 11A1]
gi|449947928|ref|ZP_21807721.1| signal recognition particle protein [Streptococcus mutans 11SSST2]
gi|449988781|ref|ZP_21820736.1| signal recognition particle protein [Streptococcus mutans NVAB]
gi|450038971|ref|ZP_21835979.1| signal recognition particle protein [Streptococcus mutans T4]
gi|449148475|gb|EMB52342.1| signal recognition particle protein [Streptococcus mutans 11A1]
gi|449156236|gb|EMB59711.1| signal recognition particle protein [Streptococcus mutans 15JP3]
gi|449168107|gb|EMB70945.1| signal recognition particle protein [Streptococcus mutans 11SSST2]
gi|449183439|gb|EMB85422.1| signal recognition particle protein [Streptococcus mutans NVAB]
gi|449200928|gb|EMC01945.1| signal recognition particle protein [Streptococcus mutans T4]
gi|449254689|gb|EMC52587.1| signal recognition particle protein [Streptococcus mutans SA41]
Length = 516
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 169/353 (47%), Positives = 242/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
+FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|450088635|ref|ZP_21854871.1| signal recognition particle protein [Streptococcus mutans NV1996]
gi|449216367|gb|EMC16492.1| signal recognition particle protein [Streptococcus mutans NV1996]
Length = 516
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 167/352 (47%), Positives = 242/352 (68%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
+FDFNDF++Q V MG M ++ MIPGM + + V+ E + A++ +MTPE
Sbjct: 327 NSFDFNDFIEQLDQVQNMGPMEDILKMIPGMANNSALSNVKVDEDEIARKRAIVSSMTPE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 387 ERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|380696278|ref|ZP_09861137.1| signal recognition particle protein [Bacteroides faecis MAJ27]
Length = 440
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/343 (50%), Positives = 236/343 (68%), Gaps = 5/343 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE E+ +SRP VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI
Sbjct: 86 MGGETVEINL-ESRPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +L EQ+ VP+Y+ P +IA+ ++EAK K D+VIVDTAGRL +D+ MM+E+
Sbjct: 145 EQLRVLAEQIEVPMYSELDSKNPVEIAQHAIQEAKAKGYDLVIVDTAGRLAVDEQMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 TAIKEAINPDEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAALSIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP E
Sbjct: 325 NQFDFNDFLSQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPAE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
R PELL S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 384 RSNPELLNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|363583065|ref|ZP_09315875.1| signal recognition particle protein [Flavobacteriaceae bacterium
HQM9]
Length = 442
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 169/335 (50%), Positives = 234/335 (69%), Gaps = 5/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG+ +E + P++IL++GLQG GKTT S KLA +LK K+ K +LVA DVYRPAAI
Sbjct: 86 MGGD-AEGINLSGTPSIILMSGLQGSGKTTFSGKLAQFLKNKKTKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ++G+Q+G+ VY+ P +A+ G+ AK +VVIVDTAGRL +D+ MM+E+
Sbjct: 145 DQLHVVGDQIGIEVYSDKENNDPVALARAGVAHAKANGCNVVIVDTAGRLAVDEQMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++ + +NP+E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAALS+K V
Sbjct: 205 SNIHKAINPSETLFVVDSMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAALSIKSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+ME ++ FYP RMA RILGMGDV+S VEKAQE +E+A ++QKKI
Sbjct: 265 VNKPIKFIGTGEKMEAIDIFYPSRMADRILGMGDVVSLVEKAQEQFDEEEARKLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFL Q + + +MG++ ++GMIPGMGK+ + + K +EA+I +MTPEE
Sbjct: 325 NQFGFDDFLSQIQQIKKMGNIKDLMGMIPGMGKMVKDV-DVDDDAFKHIEAIIHSMTPEE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
R P+L+ S R+KR+ + SG + QQV+QL+ Q
Sbjct: 384 RANPQLINAS--RKKRIGKGSGTSIQQVNQLLKQF 416
>gi|390944827|ref|YP_006408588.1| signal recognition particle subunit FFH/SRP54 (srp54) [Belliella
baltica DSM 15883]
gi|390418255|gb|AFL85833.1| signal recognition particle subunit FFH/SRP54 (srp54) [Belliella
baltica DSM 15883]
Length = 445
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/357 (48%), Positives = 240/357 (67%), Gaps = 5/357 (1%)
Query: 3 GEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQL 62
GE V K P V+L++GLQG GKTT S K A+YLKKQG+ +LVA D+YRPAAIDQL
Sbjct: 87 GETKVDVNIKGDPAVVLISGLQGSGKTTFSGKFASYLKKQGRQVLLVACDIYRPAAIDQL 146
Query: 63 VILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDV 122
+LGEQ+GV VY+ +IA + AKK VIVDTAGRL +D+ MM E++ +
Sbjct: 147 KVLGEQIGVEVYSEPENKNALEIANNAIAYAKKTGKKTVIVDTAGRLAVDEQMMKEIEAL 206
Query: 123 KRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGK 182
K+ LNP+E L VVDAMTGQ+A TF+ + G +LTKLDGD+RGGAA+S++ V K
Sbjct: 207 KKALNPSETLFVVDAMTGQDAVNTAKTFDERLNFDGVVLTKLDGDTRGGAAISIRHVVNK 266
Query: 183 PIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANF 242
PIK + GE+ME+L+ F+PDRMA RILGMGDV+S VE+AQ+ +++A+ + KI F
Sbjct: 267 PIKFISTGEKMENLDVFHPDRMAQRILGMGDVISLVERAQQTFDEDEAKRINAKIRKNQF 326
Query: 243 DFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREK 302
+F+DFL Q + +MG++ ++GMIPGMGK + + S + +EA+I +MTP ERE
Sbjct: 327 NFDDFLSQLEQIKKMGNIKDLMGMIPGMGKAMKG-LDIDDDSFRPIEAIIRSMTPLEREN 385
Query: 303 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 359
P+++ S RRKR+A SG+T +V+ L+ Q MR MK + + GG+ AL N+
Sbjct: 386 PDVIDGS--RRKRIATGSGRTITEVNNLMKQFGDMRKLMKQMNKM--GGAQKALGNI 438
>gi|254829203|ref|ZP_05233890.1| signal recognition particle protein [Listeria monocytogenes FSL
N3-165]
gi|290893069|ref|ZP_06556058.1| signal recognition particle protein [Listeria monocytogenes FSL
J2-071]
gi|404408245|ref|YP_006690960.1| signal recognition particle protein [Listeria monocytogenes
SLCC2376]
gi|422809882|ref|ZP_16858293.1| Signal recognition particle, subunit Ffh SRP54 [Listeria
monocytogenes FSL J1-208]
gi|258601615|gb|EEW14940.1| signal recognition particle protein [Listeria monocytogenes FSL
N3-165]
gi|290557429|gb|EFD90954.1| signal recognition particle protein [Listeria monocytogenes FSL
J2-071]
gi|378751546|gb|EHY62134.1| Signal recognition particle, subunit Ffh SRP54 [Listeria
monocytogenes FSL J1-208]
gi|404242394|emb|CBY63794.1| signal recognition particle protein [Listeria monocytogenes
SLCC2376]
Length = 450
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/346 (49%), Positives = 247/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI
Sbjct: 87 MGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK++++D VI+DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEEHLDYVIIDTAGRLHIDETLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K VK + PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KQVKEIATPTEILLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK + GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + E + M++K+
Sbjct: 267 TGKPIKFIATGEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDAEKMKAMEQKMKD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
+ +DFL Q + V +MG + ++ M+PG K+ + +K L +EA+I++MT
Sbjct: 327 NSMTLDDFLDQLQQVKQMGPLDELLKMMPGANKMKGLDNMNVDDKQLGHIEAIIKSMTKN 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E++ P+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 387 EKDNPDIINAS--RRKRIARGSGRPVQEINRLLKQFAEMKKMMKQM 430
>gi|55820929|ref|YP_139371.1| signal recognition particle [Streptococcus thermophilus LMG 18311]
gi|55822851|ref|YP_141292.1| signal recognition particle protein [Streptococcus thermophilus
CNRZ1066]
gi|116627717|ref|YP_820336.1| signal recognition particle [Streptococcus thermophilus LMD-9]
gi|55736914|gb|AAV60556.1| signal recognition particle [Streptococcus thermophilus LMG 18311]
gi|55738836|gb|AAV62477.1| signal recognition particle [Streptococcus thermophilus CNRZ1066]
gi|116100994|gb|ABJ66140.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Streptococcus thermophilus LMD-9]
Length = 520
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/353 (48%), Positives = 242/353 (68%), Gaps = 7/353 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E SE+ + PT+I++ GLQG GKTT + KLAN L K+Q M++A D+YRPAAI
Sbjct: 87 LGSETSEIEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEQEARPMMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I + GLE+A+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTETPAVEIVRNGLEQARANKNDYVLIDTAGRLQIDETLMKEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K +P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E+
Sbjct: 207 RDIKDFAHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAALSIREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ M+PGM P A V+ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NPALANVKVDEKQIARKRAIVLSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM-GVME 349
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ +M G ME
Sbjct: 386 EERENPDLL--TPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQGIMSGDME 436
>gi|424841015|ref|ZP_18265640.1| signal recognition particle protein [Saprospira grandis DSM 2844]
gi|395319213|gb|EJF52134.1| signal recognition particle protein [Saprospira grandis DSM 2844]
Length = 447
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 176/360 (48%), Positives = 241/360 (66%), Gaps = 5/360 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG+ + K+ P ++L+AGLQG GKTT + KL+ +LK K+ K M++A DVYRPAAI
Sbjct: 87 MGGQAVGINI-KANPGIVLIAGLQGSGKTTFTGKLSRHLKNKRSKKVMVIACDVYRPAAI 145
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL ++ EQVGV +Y P +IA G+ EAKK DVVIVDTAGRL +D+ MM E+
Sbjct: 146 NQLAVVAEQVGVDIYKEMDNKNPVEIALNGIAEAKKGKYDVVIVDTAGRLAVDEEMMTEI 205
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK + PTE L VVD+MTGQ+A FN I G +LTKLDGD+RGGAALS+K
Sbjct: 206 AAVKEAIQPTETLFVVDSMTGQDAVNTAKAFNDRINYDGVVLTKLDGDTRGGAALSIKYT 265
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
GKPIK + GE+M+ L+ F+PDRMA RILGMGD++S VEKAQE +++A+ ++KKI
Sbjct: 266 VGKPIKFISMGEKMDTLDIFHPDRMAQRILGMGDIISLVEKAQEDFDEKEAKRLEKKIRK 325
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFLKQ + +MG++ +IGMIPGMGKI + + + +EA+I +MTPEE
Sbjct: 326 NEFDFNDFLKQLAQIRKMGNLKSLIGMIPGMGKIAK-DIDIDDNAFNKIEAIILSMTPEE 384
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 359
RE P ++ S R+KR+A+ SG ++++Q + Q QMR M + + GG + N+
Sbjct: 385 RENPGVINGS--RKKRIAKGSGNRVEEINQFLRQFEQMRKMMFQMSKMQAGGGNMRMPNI 442
>gi|333904965|ref|YP_004478836.1| signal recognition particle protein [Streptococcus parauberis KCTC
11537]
gi|333120230|gb|AEF25164.1| signal recognition particle protein [Streptococcus parauberis KCTC
11537]
Length = 524
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 166/347 (47%), Positives = 240/347 (69%), Gaps = 4/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E SE+V + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETSEIVKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GT+ +I +GLE+A++ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTDHSAVEIVTKGLEQARENRNDYVLIDTAGRLQIDEKLMGEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLV+D+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E+
Sbjct: 207 RDVKALAQPNEILLVIDSMIGQEAANVADEFNKQLEITGVVLTKIDGDTRGGAALSVREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G+PIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + Q+ + E+ +K+
Sbjct: 267 TGRPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDQQKSLELVEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF+ Q V MG M ++ MIPGM G A ++ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIAQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDEKQIARKRAIVSSMTPT 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM 345
ERE PELL +P RR+R+A SG T +V++ + Q + M+ +M
Sbjct: 387 ERENPELL--NPSRRRRIASGSGNTFVEVNKFIKDFNQAKTMMQGMM 431
>gi|289550983|ref|YP_003471887.1| signal recognition particle, subunit Ffh SRP54 [Staphylococcus
lugdunensis HKU09-01]
gi|315658478|ref|ZP_07911350.1| signal recognition particle protein [Staphylococcus lugdunensis
M23590]
gi|385784604|ref|YP_005760777.1| signal recognition particle protein [Staphylococcus lugdunensis
N920143]
gi|289180515|gb|ADC87760.1| Signal recognition particle, subunit Ffh SRP54 [Staphylococcus
lugdunensis HKU09-01]
gi|315496807|gb|EFU85130.1| signal recognition particle protein [Staphylococcus lugdunensis
M23590]
gi|339894860|emb|CCB54157.1| signal recognition particle protein [Staphylococcus lugdunensis
N920143]
Length = 455
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/346 (49%), Positives = 247/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + A PTV+++ GLQG GKTT + KLA + KK K MLVAGD+YRPAAI
Sbjct: 87 MGGENTTIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAGDIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ VPVY+ G +VKP QI + L+ AK++++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 DQLQTVGKQLDVPVYSEGDQVKPQQIVENALKHAKEEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++VK + P EV+LVVDAMTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V
Sbjct: 207 QEVKAISKPDEVMLVVDAMTGQDAVNVAQSFDEQLDVTGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+M+ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 TQKPIKFVGMSEKMDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT-PAQVREAEKSLKIMEAMIEAMTPE 298
++F DFL Q V +G + ++ MIPGM K+ ++ +K + ++A+I++MTP
Sbjct: 327 SSFTLEDFLDQLDQVKNLGPLDDIMKMIPGMNKMKGMNKLNMDDKQIDHIKAIIQSMTPM 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERANPATLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|386086552|ref|YP_006002426.1| SRP54, signal recognition particle GTPase protein, putative
[Streptococcus thermophilus ND03]
gi|387909791|ref|YP_006340097.1| SRP54, signal recognition particle GTPase protein [Streptococcus
thermophilus MN-ZLW-002]
gi|312278265|gb|ADQ62922.1| SRP54, signal recognition particle GTPase protein, putative
[Streptococcus thermophilus ND03]
gi|387574726|gb|AFJ83432.1| SRP54, signal recognition particle GTPase protein, putative
[Streptococcus thermophilus MN-ZLW-002]
Length = 520
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/353 (48%), Positives = 242/353 (68%), Gaps = 7/353 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E SE+ + PT+I++ GLQG GKTT + KLAN L K+Q M++A D+YRPAAI
Sbjct: 87 LGSETSEIEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEQEARPMMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I + GLE+A+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTETPAVEIVRNGLEQARANKNDYVLIDTAGRLQIDETLMKEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K +P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E+
Sbjct: 207 RDIKDFAHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAALSIREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ M+PGM P A V+ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NPALANVKVDEKQIARKRAIVLSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM-GVME 349
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ +M G ME
Sbjct: 386 EERENPDLL--TPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQGIMSGDME 436
>gi|57866688|ref|YP_188386.1| signal recognition particle protein [Staphylococcus epidermidis
RP62A]
gi|242242520|ref|ZP_04796965.1| signal recognition particle protein [Staphylococcus epidermidis
W23144]
gi|418613018|ref|ZP_13176039.1| signal recognition particle protein [Staphylococcus epidermidis
VCU117]
gi|418626769|ref|ZP_13189365.1| signal recognition particle protein [Staphylococcus epidermidis
VCU126]
gi|418630376|ref|ZP_13192858.1| signal recognition particle protein [Staphylococcus epidermidis
VCU128]
gi|418634110|ref|ZP_13196508.1| signal recognition particle protein [Staphylococcus epidermidis
VCU129]
gi|420174994|ref|ZP_14681440.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM061]
gi|420177373|ref|ZP_14683709.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM057]
gi|420179856|ref|ZP_14686132.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM053]
gi|420189842|ref|ZP_14695801.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM037]
gi|420191715|ref|ZP_14697626.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM023]
gi|420204159|ref|ZP_14709719.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM015]
gi|420234397|ref|ZP_14738960.1| signal recognition particle protein [Staphylococcus epidermidis
NIH051475]
gi|57637346|gb|AAW54134.1| signal recognition particle protein [Staphylococcus epidermidis
RP62A]
gi|242234028|gb|EES36340.1| signal recognition particle protein [Staphylococcus epidermidis
W23144]
gi|374817328|gb|EHR81513.1| signal recognition particle protein [Staphylococcus epidermidis
VCU117]
gi|374831313|gb|EHR95055.1| signal recognition particle protein [Staphylococcus epidermidis
VCU126]
gi|374837917|gb|EHS01475.1| signal recognition particle protein [Staphylococcus epidermidis
VCU128]
gi|374838102|gb|EHS01659.1| signal recognition particle protein [Staphylococcus epidermidis
VCU129]
gi|394244527|gb|EJD89869.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM061]
gi|394247757|gb|EJD92999.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM057]
gi|394252334|gb|EJD97371.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM053]
gi|394259957|gb|EJE04783.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM037]
gi|394265866|gb|EJE10513.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM023]
gi|394274173|gb|EJE18598.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM015]
gi|394304200|gb|EJE47607.1| signal recognition particle protein [Staphylococcus epidermidis
NIH051475]
Length = 455
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 165/346 (47%), Positives = 250/346 (72%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + A PTV+++ GLQG GKTT + KLA + KK K +LVAGD+YRPAAI
Sbjct: 87 MGGENTSIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPLLVAGDIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ +PVY+ G +V P QI + L+ AK++++D VI+DTAGRL ID+ +M+EL
Sbjct: 147 DQLQTVGKQIDIPVYSEGDQVSPQQIVENALKHAKEEHLDFVIIDTAGRLHIDETLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++VK + P E++LVVDAMTGQ+A + +F+ ++ ++G LTKLDGD+RGGAALS++ V
Sbjct: 207 QEVKEISKPDEIMLVVDAMTGQDAVNVAQSFDEQLDVSGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ ++K + ++A+I++MTP+
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER PE L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERSNPETLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|257427951|ref|ZP_05604349.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 65-1322]
gi|293501045|ref|ZP_06666896.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 58-424]
gi|257274792|gb|EEV06279.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 65-1322]
gi|291096050|gb|EFE26311.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 58-424]
Length = 455
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 165/346 (47%), Positives = 248/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI
Sbjct: 87 MGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 NQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K+VK + P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGG ALS++ V
Sbjct: 207 KEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGVALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKELDKLNMSEKQIDHIKAIIQSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|450052707|ref|ZP_21841379.1| signal recognition particle protein [Streptococcus mutans NFSM1]
gi|56968646|gb|AAW32279.1| Ffh [Streptococcus mutans]
gi|449200130|gb|EMC01176.1| signal recognition particle protein [Streptococcus mutans NFSM1]
Length = 516
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/353 (47%), Positives = 242/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIVMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
+FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|450034650|ref|ZP_21834504.1| signal recognition particle protein [Streptococcus mutans M21]
gi|449196176|gb|EMB97461.1| signal recognition particle protein [Streptococcus mutans M21]
Length = 516
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/353 (47%), Positives = 242/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
+FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|431799152|ref|YP_007226056.1| signal recognition particle protein [Echinicola vietnamensis DSM
17526]
gi|430789917|gb|AGA80046.1| signal recognition particle protein [Echinicola vietnamensis DSM
17526]
Length = 446
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 178/359 (49%), Positives = 241/359 (67%), Gaps = 6/359 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG E + K P VIL++GLQG GKTT S KLA +LKKQG+ +LVA D+YRPAAI+
Sbjct: 86 MGG-TKEDINLKGDPNVILISGLQGSGKTTFSGKLATHLKKQGRQVLLVACDIYRPAAIE 144
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LGEQ+GV VY IA + + AKK VIVDTAGRL +D+ MM+E+
Sbjct: 145 QLKTLGEQIGVEVYAEPENKNALDIASKAIAYAKKNGKKNVIVDTAGRLAVDEQMMNEIS 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K L+P E L VVD+MTGQ+A TF+ + G +LTKLDGD+RGGAA+S++ V
Sbjct: 205 DLKENLDPAETLFVVDSMTGQDAVNTAKTFDERLDFDGVVLTKLDGDTRGGAAISIRHVV 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK + GE+ME+L+ FYPDRMA RILGMGDV+S VEKAQ+ +++A+ + KI
Sbjct: 265 DKPIKFISTGEKMENLDVFYPDRMAQRILGMGDVVSLVEKAQQSFDEDEAKRINAKIRKN 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F+F+DFL Q + +MG++ ++GMIPGMGK+ + + S K +EA+I +MTP ER
Sbjct: 325 QFNFDDFLSQIEQIKKMGNLKDLMGMIPGMGKMIKG-LDIDDDSFKPIEAIIRSMTPLER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 359
E P+++ S RRKR+A SG++ Q+V+ L+ Q MR MK + + GG+ AL NL
Sbjct: 384 ENPDVIDGS--RRKRIADGSGRSIQEVNNLMKQFRDMRKMMKQMNKM--GGAQRALGNL 438
>gi|414597552|ref|ZP_11447116.1| Signal recognition particle protein [Leuconostoc citreum LBAE E16]
gi|421877939|ref|ZP_16309469.1| Signal recognition particle protein [Leuconostoc citreum LBAE C10]
gi|421878934|ref|ZP_16310410.1| Signal recognition particle protein [Leuconostoc citreum LBAE C11]
gi|372556275|emb|CCF25589.1| Signal recognition particle protein [Leuconostoc citreum LBAE C10]
gi|390447237|emb|CCF26530.1| Signal recognition particle protein [Leuconostoc citreum LBAE C11]
gi|390481673|emb|CCF29177.1| Signal recognition particle protein [Leuconostoc citreum LBAE E16]
Length = 491
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 180/362 (49%), Positives = 240/362 (66%), Gaps = 13/362 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MG E L + PTVI++AGLQG GKTT AKLA LK +Q +L+A DVYRPAAI
Sbjct: 87 MGEEAVPLNKSPKIPTVIMMAGLQGAGKTTTVAKLAYKLKNEQHARPLLIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ILG +G+PV+ GT++ P I +QGL EA K D V +DTAGRLQID+ +M EL
Sbjct: 147 DQLEILGRDLGIPVFQLGTDINPRDIVRQGLAEAHKNKNDYVFIDTAGRLQIDETLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
KD+ + +P E+LL VDAMTGQ AA F+ + +TG +LTKLDGD+RGGAALS+++V
Sbjct: 207 KDIADIASPDEILLTVDAMTGQNAAETAKGFSAALDLTGVVLTKLDGDTRGGAALSIRDV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK +G+GE+ DL+ FYPDRMA RILGMGDVL+ +EKAQ +E + +K+
Sbjct: 267 TGKPIKFIGQGEKPTDLDVFYPDRMASRILGMGDVLTLIEKAQRDFDEEAQAKQLEKMRQ 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q + V +MG M ++ MIPGM P A V K +EA++ +MTP
Sbjct: 327 NTFDFNDFVAQLKQVQKMGPMEDLLKMIPGMAN-NPALANVNIDAKQFSHLEAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-----NLMGV--MEG 350
ERE P+L+ +P RR+R+A +G+ +V++++ Q QMR M N G+ M G
Sbjct: 386 AERENPDLI--NPSRRRRLAAGAGRPIVEVNRMIKQFDQMRKMMNQATNGNFGGLDKMMG 443
Query: 351 GS 352
GS
Sbjct: 444 GS 445
>gi|345019917|ref|ZP_08783530.1| signal recognition particle [Ornithinibacillus scapharcae TW25]
Length = 449
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/346 (48%), Positives = 247/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ + PTVI++ GLQG GKTT + KLAN L KK +S +LVA DVYRPAAI
Sbjct: 87 MGGEQSKIAVSDRPPTVIMMVGLQGAGKTTTTGKLANLLRKKYNRSPLLVACDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG Q+ +PV++ GTE P IAK + +AK+++ D V++DTAGRL +D +M EL
Sbjct: 147 KQLETLGSQLDMPVFSMGTEANPVDIAKNAIAKAKEEHHDYVLIDTAGRLHVDTDLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K +NP E+ LVVDAMTGQ+A + +FN ++ I+G I+TKLDGD+RGGAALS+K V
Sbjct: 207 EQIKDTVNPDEIFLVVDAMTGQDAVNVAESFNEQLDISGVIVTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GK IK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + ++ A+ +++K+ +
Sbjct: 267 TGKSIKFAGMGEKLDQLEPFHPERMASRILGMGDVLTLIEKAQSSVDEKQAKALEEKMRN 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
A F F+DFL+Q V +MG + ++ MIPG K+ + V+ EK L +EA+I++MT +
Sbjct: 327 ATFTFDDFLEQMSQVKKMGPLDDLLAMIPGANKMKGLKNVQFDEKQLSHVEAIIQSMTKK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER+ P ++ S R+KR+A+ SG + QV++L+ Q +M+ MK +
Sbjct: 387 ERQDPTIMNAS--RKKRIAKGSGTSVSQVNRLLKQFDEMKKMMKQM 430
>gi|422826334|ref|ZP_16874513.1| signal recognition particle protein [Streptococcus sanguinis SK678]
gi|324994452|gb|EGC26365.1| signal recognition particle protein [Streptococcus sanguinis SK678]
Length = 524
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/353 (48%), Positives = 243/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSNTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GT+V +I +QGLE+AK + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTDVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 SDVKALANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 386 AERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|390557792|ref|ZP_10243195.1| signal recognition particle-like (SRP) GTPase [Nitrolancetus
hollandicus Lb]
gi|390174633|emb|CCF82484.1| signal recognition particle-like (SRP) GTPase [Nitrolancetus
hollandicus Lb]
Length = 507
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 167/345 (48%), Positives = 247/345 (71%), Gaps = 3/345 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+G E L A + PT+I+L GLQG GKTT AKLA +L+K GK +LVA DVYRPAAID
Sbjct: 86 LGSERVPLQTATAPPTIIMLVGLQGSGKTTHIAKLAAHLRKDGKRPLLVAADVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LG Q+ V VY+ G + P +IAK ++ A+ + V++DTAGRLQID+ MM EL+
Sbjct: 146 QLETLGAQINVQVYSEGAKENPVKIAKNAIQYARSYGFNPVMIDTAGRLQIDEPMMLELE 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+ + PTE LLV DAMTGQEA + F+ + +TG ILTK+DGD+RGGAALS++ V
Sbjct: 206 HLTEEVEPTETLLVADAMTGQEAVNVAQEFHRRLNLTGLILTKMDGDARGGAALSIRSVV 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK +G GER++ LEPFYPDR+A RILGMGDVL+ +E+AQ + +++++++++K+++
Sbjct: 266 GVPIKFIGTGERIDALEPFYPDRLASRILGMGDVLTLIERAQTEITEDESKKLEEKVLTG 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEE 299
+F+ DFL+Q + + +MG +++++ MIPG+G+ Q V+ ++ K +EA+I +MTPEE
Sbjct: 326 SFNLEDFLRQLQQIKKMGPLTQLLEMIPGIGQALRQQDVQVSDDEYKHIEAIIYSMTPEE 385
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
R +PE++ P RR+R+A SG ++ +V+QL+ Q QM+ M +L
Sbjct: 386 RRRPEII--KPSRRRRIAMGSGTSQAEVNQLLTQFKQMQKMMADL 428
>gi|424714677|ref|YP_007015392.1| Signal recognition particle protein [Listeria monocytogenes
serotype 4b str. LL195]
gi|424013861|emb|CCO64401.1| Signal recognition particle protein [Listeria monocytogenes
serotype 4b str. LL195]
Length = 451
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/346 (49%), Positives = 248/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI
Sbjct: 88 MGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAI 147
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK++++D VI+DTAGRL ID+ +MDEL
Sbjct: 148 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEEHLDYVIIDTAGRLHIDETLMDEL 207
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K VK + PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 208 KQVKEIATPTEILLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSV 267
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK + GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + E + M++K+
Sbjct: 268 TGKPIKFIATGEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAMEQKMKD 327
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
+ +DFL+Q + V +MG + ++ M+PG K+ + +K L +EA+I++MT
Sbjct: 328 NSMTLDDFLEQLQQVKQMGPLDELLKMMPGANKMKGLDNMNVDDKQLGHIEAIIKSMTKN 387
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E++ P+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 388 EKDNPDIINAS--RRKRIARGSGRPVQEINRLLKQFGEMKKMMKQM 431
>gi|167761983|ref|ZP_02434110.1| hypothetical protein BACSTE_00328 [Bacteroides stercoris ATCC
43183]
gi|167700215|gb|EDS16794.1| signal recognition particle protein [Bacteroides stercoris ATCC
43183]
Length = 440
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 175/357 (49%), Positives = 241/357 (67%), Gaps = 5/357 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE +E+ S+P VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI
Sbjct: 86 MGGETAEINI-DSKPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +L EQ+ VP+Y+ P IA+ ++EAK K D+VIVDTAGRL +D+ MM+E+
Sbjct: 145 EQLRVLAEQIEVPMYSEPDSKDPVSIAQNAIQEAKAKGYDLVIVDTAGRLAVDEEMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 AAIKSAINPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTPEE
Sbjct: 325 NQFDFNDFLSQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPEE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 356
R P +L S RR+R+A+ SG Q+V++L+ Q Q R MK + G G +P L
Sbjct: 384 RSNPAILNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTGSKMGKMMPKL 438
>gi|449937443|ref|ZP_21804559.1| signal recognition particle protein [Streptococcus mutans 2ST1]
gi|450077600|ref|ZP_21850546.1| signal recognition particle protein [Streptococcus mutans N3209]
gi|450154315|ref|ZP_21877665.1| signal recognition particle protein [Streptococcus mutans 21]
gi|449164238|gb|EMB67305.1| signal recognition particle protein [Streptococcus mutans 2ST1]
gi|449211007|gb|EMC11429.1| signal recognition particle protein [Streptococcus mutans N3209]
gi|449237922|gb|EMC36717.1| signal recognition particle protein [Streptococcus mutans 21]
Length = 512
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/353 (47%), Positives = 242/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
+FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|427386247|ref|ZP_18882444.1| signal recognition particle protein [Bacteroides oleiciplenus YIT
12058]
gi|425726287|gb|EKU89152.1| signal recognition particle protein [Bacteroides oleiciplenus YIT
12058]
Length = 439
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 174/347 (50%), Positives = 239/347 (68%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE +E V + +P VIL++GLQG GKTT S KLA LK K+ K +LVA DVYRPAAI
Sbjct: 86 MGGETAE-VDLEGKPAVILMSGLQGSGKTTFSGKLARMLKTKKNKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +L EQ+GVP+Y+ P +IA+ ++EAK K DVVIVDTAGRL +D+ MM+E+
Sbjct: 145 EQLRVLAEQIGVPMYSEPDSKSPVKIAENAIQEAKAKGYDVVIVDTAGRLAVDEEMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K+ +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 AAIKKAINPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAALSIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+++ ++ F+P RM+ RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VNKPIKFVGTGEKLDAIDQFHPSRMSDRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP E
Sbjct: 325 NQFDFNDFLSQIAQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPAE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R P LL S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 384 RSNPALLNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|116873236|ref|YP_850017.1| signal recognition particle protein [Listeria welshimeri serovar 6b
str. SLCC5334]
gi|116742114|emb|CAK21238.1| signal recognition particle protein [Listeria welshimeri serovar 6b
str. SLCC5334]
Length = 450
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/346 (49%), Positives = 249/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI
Sbjct: 87 MGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK++++D VI+DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEEHLDYVIIDTAGRLHIDETLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K VK + PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KQVKEIATPTEILLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK V GE+ME +E F+PDRMA RILGMGDVLS +EKAQ + E + M++K+
Sbjct: 267 TGKPIKFVATGEKMEAIETFHPDRMASRILGMGDVLSLIEKAQTDVDAEKMKAMEQKMKD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
+ +DFL+Q + V +MG + ++ M+PG K+ ++ +K L +EA+I++MT
Sbjct: 327 NSMTLDDFLEQLQQVKQMGPLDELLKMMPGANKMKGLDNMQVDDKQLGHIEAIIKSMTKN 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E++ P+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 387 EKDNPDIINAS--RRKRIARGSGRPIQEINRLLKQFAEMKKMMKQM 430
>gi|423302186|ref|ZP_17280209.1| signal recognition particle protein [Bacteroides finegoldii
CL09T03C10]
gi|408471277|gb|EKJ89809.1| signal recognition particle protein [Bacteroides finegoldii
CL09T03C10]
Length = 440
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 174/345 (50%), Positives = 236/345 (68%), Gaps = 9/345 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE +E+ SRP VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI
Sbjct: 86 MGGETAEINI-DSRPAVILMSGLQGSGKTTFSGKLARMLKSKKNRKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +L EQ+ VP+Y P +IA+ ++EAK K D+VIVDTAGRL +D+ MM+E+
Sbjct: 145 EQLRVLAEQIEVPMYCELDSKNPVEIAQHAIQEAKAKGYDLVIVDTAGRLAVDEQMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 AAIKEAINPNEILFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAALSIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE++E ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VNKPIKFIGTGEKLEAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDFL Q + +MG++ + MIPG+G PA + + + K +EA+I +MTP
Sbjct: 325 NQFDFNDFLSQIAQIKKMGNLKELASMIPGVG---PALKNIDIDDNAFKSIEAIIYSMTP 381
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
ER PE+L S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 382 AERSNPEILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|294500961|ref|YP_003564661.1| signal recognition particle protein [Bacillus megaterium QM B1551]
gi|295706307|ref|YP_003599382.1| signal recognition particle protein [Bacillus megaterium DSM 319]
gi|384045187|ref|YP_005493204.1| signal recognition particle-like (SRP) component [Bacillus
megaterium WSH-002]
gi|294350898|gb|ADE71227.1| signal recognition particle protein [Bacillus megaterium QM B1551]
gi|294803966|gb|ADF41032.1| signal recognition particle protein [Bacillus megaterium DSM 319]
gi|345442878|gb|AEN87895.1| Signal recognition particle-like (SRP) component [Bacillus
megaterium WSH-002]
Length = 447
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 167/346 (48%), Positives = 248/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT + KLAN L KK ++ +LVA D+YRPAAI
Sbjct: 87 MGGEQSKIAVAPKAPTVIMMVGLQGAGKTTTTGKLANLLRKKYNRNPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ + V++ G +V P +IAKQ + AK+++ D V++DTAGRL +D+ +M+EL
Sbjct: 147 KQLETLGKQLSMSVFSLGDQVSPVEIAKQAIAHAKEEHHDYVLIDTAGRLHVDENLMEEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K + NP E+ LVVDAMTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V
Sbjct: 207 EQIKELSNPDEIFLVVDAMTGQDAVNVADSFNKQLGLTGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK VG GE+M+ +E F+P+RMA RILGMGDVL+ +EKAQ + E A+E++ K+ +
Sbjct: 267 TDTPIKFVGLGEKMDAIEAFHPERMASRILGMGDVLTLIEKAQANVDAEKAKELEAKLRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
+F F+DFL Q V +MG + +IGM+PG K+ + ++ EK + +EA+I +MT
Sbjct: 327 QSFTFDDFLDQLAQVRQMGPLDELIGMLPGANKVKGLKNLQVDEKQINHVEAIIRSMTKA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E+ PE++ S RRKR+A+ SG++ Q+V++L+ Q M+ MK +
Sbjct: 387 EKTNPEIINAS--RRKRIAKGSGRSVQEVNRLLKQFEDMKKMMKQM 430
>gi|255026961|ref|ZP_05298947.1| hypothetical protein LmonocytFSL_12638 [Listeria monocytogenes FSL
J2-003]
Length = 450
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/346 (49%), Positives = 247/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI
Sbjct: 87 MGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK++++D VI+DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEEHLDYVIIDTAGRLHIDETLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K VK + PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KQVKEIATPTEILLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK + GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + E + M++K+
Sbjct: 267 TGKPIKFIATGEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDAEKMKAMEQKMKD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
+ +DFL Q + V +MG + ++ M+PG K+ + +K L +EA+I++MT
Sbjct: 327 NSMTLDDFLDQLQQVKQMGPLDELLKMMPGANKMKGLDNMNVDDKQLGHIEAIIKSMTKN 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E++ P+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 387 EKDNPDIINAS--RRKRIARGSGRPVQEINRLLKQFAEMKKMMKQM 430
>gi|404287230|ref|YP_006693816.1| signal recognition particle protein [Listeria monocytogenes
serotype 7 str. SLCC2482]
gi|404246159|emb|CBY04384.1| signal recognition particle protein [Listeria monocytogenes
serotype 7 str. SLCC2482]
Length = 467
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/346 (49%), Positives = 248/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI
Sbjct: 87 MGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK++++D VI+DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEEHLDYVIIDTAGRLHIDETLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K VK + PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KQVKEIATPTEILLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK + GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + E + M++K+
Sbjct: 267 TGKPIKFIATGEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAMEQKMKD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
+ +DFL+Q + V +MG + ++ M+PG K+ + +K L +EA+I++MT
Sbjct: 327 NSMTLDDFLEQLQQVKQMGPLDELLKMMPGANKMKGLDNMNVDDKQLGHIEAIIKSMTKN 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E++ P+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 387 EKDNPDIINAS--RRKRIARGSGRPVQEINRLLKQFGEMKKMMKQM 430
>gi|255692684|ref|ZP_05416359.1| signal recognition particle protein [Bacteroides finegoldii DSM
17565]
gi|260621568|gb|EEX44439.1| signal recognition particle protein [Bacteroides finegoldii DSM
17565]
Length = 440
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 173/343 (50%), Positives = 235/343 (68%), Gaps = 5/343 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE +E+ SRP VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI
Sbjct: 86 MGGETAEINI-DSRPAVILMSGLQGSGKTTFSGKLARMLKSKKNRKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +L EQ+ VP+Y P +IA+ ++EAK K D+VIVDTAGRL +D+ MM+E+
Sbjct: 145 EQLRVLAEQIEVPMYCELDSKNPVEIAQHAIQEAKAKGYDLVIVDTAGRLAVDEQMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 AAIKEAINPNEILFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAALSIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP E
Sbjct: 325 NQFDFNDFLSQIAQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPAE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
R PE+L S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 384 RSNPEILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|327313674|ref|YP_004329111.1| signal recognition particle protein [Prevotella denticola F0289]
gi|326946347|gb|AEA22232.1| signal recognition particle protein [Prevotella denticola F0289]
Length = 447
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 176/347 (50%), Positives = 239/347 (68%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE L +RP +IL++GLQG GKTT S KLAN LK K+ K +LVA DVYRPAAI
Sbjct: 86 MGGEAVGLNLV-NRPAIILMSGLQGSGKTTFSGKLANMLKTKEHKHPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL ++GEQVGVPVY+ ++IA + EAK K DVVI+DTAGRL +D+ MM+E+
Sbjct: 145 EQLKVVGEQVGVPVYSEPDNKTVNEIADHAIAEAKAKGNDVVIIDTAGRLAVDEDMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K+ + P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 ESLKKHVTPDETLFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A+ +QKKI
Sbjct: 265 VTKPIKFIGTGEKMEAVDVFHPGRMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP+E
Sbjct: 325 NQFDFNDFYNQIQQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIEAIIQSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 384 RTNPEVLNNS--RRQRIAKGSGTNLQEVNRLIKQFDQTRKMMKMVTG 428
>gi|449918559|ref|ZP_21797416.1| signal recognition particle protein [Streptococcus mutans 1SM1]
gi|449160184|gb|EMB63462.1| signal recognition particle protein [Streptococcus mutans 1SM1]
Length = 516
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 167/352 (47%), Positives = 241/352 (68%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
+FDFNDF++Q V MG M ++ MIPGM + + V+ E + A++ +MTPE
Sbjct: 327 NSFDFNDFIEQLDQVQNMGPMEDILKMIPGMANNSALSNVKVDEDEIARKRAIVSSMTPE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 387 ERENPNLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|46908032|ref|YP_014421.1| signal recognition particle protein [Listeria monocytogenes
serotype 4b str. F2365]
gi|47093840|ref|ZP_00231584.1| signal recognition particle protein [Listeria monocytogenes str. 4b
H7858]
gi|226224404|ref|YP_002758511.1| signal recognition particle protein Ffh [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|254826157|ref|ZP_05231158.1| signal recognition particle protein [Listeria monocytogenes FSL
J1-194]
gi|254933273|ref|ZP_05266632.1| signal recognition particle protein [Listeria monocytogenes
HPB2262]
gi|254994058|ref|ZP_05276248.1| hypothetical protein LmonocytoFSL_14589 [Listeria monocytogenes FSL
J2-064]
gi|255521154|ref|ZP_05388391.1| hypothetical protein LmonocFSL_08006 [Listeria monocytogenes FSL
J1-175]
gi|300763886|ref|ZP_07073883.1| signal recognition particle protein [Listeria monocytogenes FSL
N1-017]
gi|386732541|ref|YP_006206037.1| signal recognition particle protein [Listeria monocytogenes
07PF0776]
gi|404281413|ref|YP_006682311.1| signal recognition particle protein [Listeria monocytogenes
SLCC2755]
gi|405750152|ref|YP_006673618.1| signal recognition particle protein [Listeria monocytogenes ATCC
19117]
gi|405753027|ref|YP_006676492.1| signal recognition particle protein [Listeria monocytogenes
SLCC2378]
gi|405755961|ref|YP_006679425.1| signal recognition particle protein [Listeria monocytogenes
SLCC2540]
gi|406704584|ref|YP_006754938.1| signal recognition particle protein [Listeria monocytogenes L312]
gi|417315453|ref|ZP_12102129.1| signal recognition particle protein [Listeria monocytogenes J1816]
gi|424823562|ref|ZP_18248575.1| Signal recognition particle [Listeria monocytogenes str. Scott A]
gi|46881302|gb|AAT04598.1| signal recognition particle protein [Listeria monocytogenes
serotype 4b str. F2365]
gi|47017781|gb|EAL08570.1| signal recognition particle protein [Listeria monocytogenes str. 4b
H7858]
gi|225876866|emb|CAS05575.1| Putative signal recognition particle protein Ffh [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|293584833|gb|EFF96865.1| signal recognition particle protein [Listeria monocytogenes
HPB2262]
gi|293595397|gb|EFG03158.1| signal recognition particle protein [Listeria monocytogenes FSL
J1-194]
gi|300515622|gb|EFK42672.1| signal recognition particle protein [Listeria monocytogenes FSL
N1-017]
gi|328466157|gb|EGF37314.1| signal recognition particle protein [Listeria monocytogenes J1816]
gi|332312242|gb|EGJ25337.1| Signal recognition particle [Listeria monocytogenes str. Scott A]
gi|384391299|gb|AFH80369.1| signal recognition particle protein [Listeria monocytogenes
07PF0776]
gi|404219352|emb|CBY70716.1| signal recognition particle protein [Listeria monocytogenes ATCC
19117]
gi|404222227|emb|CBY73590.1| signal recognition particle protein [Listeria monocytogenes
SLCC2378]
gi|404225161|emb|CBY76523.1| signal recognition particle protein [Listeria monocytogenes
SLCC2540]
gi|404228048|emb|CBY49453.1| signal recognition particle protein [Listeria monocytogenes
SLCC2755]
gi|406361614|emb|CBY67887.1| signal recognition particle protein [Listeria monocytogenes L312]
Length = 450
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/346 (49%), Positives = 248/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI
Sbjct: 87 MGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK++++D VI+DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEEHLDYVIIDTAGRLHIDETLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K VK + PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KQVKEIATPTEILLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK + GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + E + M++K+
Sbjct: 267 TGKPIKFIATGEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAMEQKMKD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
+ +DFL+Q + V +MG + ++ M+PG K+ + +K L +EA+I++MT
Sbjct: 327 NSMTLDDFLEQLQQVKQMGPLDELLKMMPGANKMKGLDNMNVDDKQLGHIEAIIKSMTKN 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E++ P+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 387 EKDNPDIINAS--RRKRIARGSGRPVQEINRLLKQFGEMKKMMKQM 430
>gi|450109576|ref|ZP_21861516.1| signal recognition particle protein [Streptococcus mutans SM6]
gi|449225932|gb|EMC25497.1| signal recognition particle protein [Streptococcus mutans SM6]
Length = 516
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/353 (47%), Positives = 242/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
+FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|449994935|ref|ZP_21822829.1| signal recognition particle protein [Streptococcus mutans A9]
gi|450009858|ref|ZP_21828384.1| signal recognition particle protein [Streptococcus mutans A19]
gi|450023214|ref|ZP_21830478.1| signal recognition particle protein [Streptococcus mutans U138]
gi|450116481|ref|ZP_21864528.1| signal recognition particle protein [Streptococcus mutans ST1]
gi|449184857|gb|EMB86770.1| signal recognition particle protein [Streptococcus mutans A9]
gi|449190757|gb|EMB92311.1| signal recognition particle protein [Streptococcus mutans A19]
gi|449193916|gb|EMB95286.1| signal recognition particle protein [Streptococcus mutans U138]
gi|449226962|gb|EMC26427.1| signal recognition particle protein [Streptococcus mutans ST1]
Length = 516
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/353 (47%), Positives = 242/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
+FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|322385512|ref|ZP_08059156.1| signal recognition particle protein [Streptococcus cristatus ATCC
51100]
gi|417921132|ref|ZP_12564627.1| signal recognition particle protein [Streptococcus cristatus ATCC
51100]
gi|321270250|gb|EFX53166.1| signal recognition particle protein [Streptococcus cristatus ATCC
51100]
gi|342835052|gb|EGU69310.1| signal recognition particle protein [Streptococcus cristatus ATCC
51100]
Length = 522
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/353 (48%), Positives = 244/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PTVI++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTVIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I +QGLE+AK + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEFPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 ADVKALAQPNEILLVVDAMIGQEAANVAREFNNQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+GRILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSGRILGMGDMLTLIEKAAQEYDEKKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ M+PGM PA ++ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEELLKMLPGMAN-NPALKNIKVDEKEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GV+ G
Sbjct: 386 AERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|450182820|ref|ZP_21888463.1| signal recognition particle protein [Streptococcus mutans 24]
gi|449244145|gb|EMC42531.1| signal recognition particle protein [Streptococcus mutans 24]
Length = 516
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 167/352 (47%), Positives = 241/352 (68%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
+FDFNDF++Q V MG M ++ MIPGM + + V+ E + A++ +MTPE
Sbjct: 327 NSFDFNDFIEQLDQVQNMGPMEDILKMIPGMANNSALSNVKVDEDEIARKRAIVSSMTPE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 387 ERENPNLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|449965794|ref|ZP_21812028.1| signal recognition particle protein [Streptococcus mutans 15VF2]
gi|449170924|gb|EMB73611.1| signal recognition particle protein [Streptococcus mutans 15VF2]
Length = 516
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/353 (47%), Positives = 242/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
+FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|397649721|ref|YP_006490248.1| signal recognition particle protein [Streptococcus mutans GS-5]
gi|392603290|gb|AFM81454.1| signal recognition particle protein [Streptococcus mutans GS-5]
Length = 516
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 168/353 (47%), Positives = 242/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
+FDFNDF++Q + MG M ++ MIPGM P A V+ E + A++ +MTP
Sbjct: 327 NSFDFNDFIEQLDQIQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|417887086|ref|ZP_12531225.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21195]
gi|341858508|gb|EGS99298.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21195]
Length = 455
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 166/346 (47%), Positives = 248/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI
Sbjct: 87 MGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 NQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K+VK + P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V
Sbjct: 207 KEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A+ ++KK+
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKYLEKKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|422855528|ref|ZP_16902186.1| signal recognition particle protein [Streptococcus sanguinis SK1]
gi|327462217|gb|EGF08544.1| signal recognition particle protein [Streptococcus sanguinis SK1]
Length = 524
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/353 (48%), Positives = 243/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G +E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSNTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GT+V +I +QGLE+AK + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTDVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 SDVKALANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 386 AERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|238852592|ref|ZP_04643002.1| signal recognition particle protein [Lactobacillus gasseri 202-4]
gi|238834738|gb|EEQ26965.1| signal recognition particle protein [Lactobacillus gasseri 202-4]
Length = 476
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 175/362 (48%), Positives = 247/362 (68%), Gaps = 11/362 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L ++ PT+I++ GLQG GKTT KLANYL K K+ +L+AGD+YRPAAI
Sbjct: 87 MGEEAVSLNKSQHIPTIIMMVGLQGTGKTTTVGKLANYLMKNEKARPLLIAGDIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ VPVY+ + ++I K GLEEA K D V++DTAGRL+ID+ +MDEL
Sbjct: 147 DQLKQIGQQLNVPVYSEDNQ-NVAEIVKHGLEEADKNKNDYVLIDTAGRLEIDEQLMDEL 205
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K V V +P LLVVDAMTGQ A + FN ++ +TG ILTKLDGD+RGGAALS++ V
Sbjct: 206 KRVTAVAHPDNTLLVVDAMTGQAATQVAEGFNNDLDLTGIILTKLDGDTRGGAALSIRAV 265
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PI G+GE++ DL F+PDRMA RILGMGD+L+ +EKAQ+ ++AE+M +K+
Sbjct: 266 TGLPIIFTGQGEKLTDLSTFHPDRMASRILGMGDMLTLIEKAQQDYDAKEAEKMAEKMRE 325
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V +MG + ++I MIPG+G PA ++ EK + ++A++ +MTP
Sbjct: 326 NTFDFNDFIDQMDQVQKMGPLDQIIKMIPGLGN-NPALKNIQIPEKQISHLKAIVYSMTP 384
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
EERE P++L +P RR+R+A SG++ +V++++ Q Q K +M M G + +
Sbjct: 385 EERENPDIL--NPSRRRRIAAGSGRSIAEVNRMIKQFKQ----SKEMMQKMTKGDMGEFA 438
Query: 358 NL 359
NL
Sbjct: 439 NL 440
>gi|262037316|ref|ZP_06010787.1| signal recognition particle protein [Leptotrichia goodfellowii
F0264]
gi|261748664|gb|EEY36032.1| signal recognition particle protein [Leptotrichia goodfellowii
F0264]
Length = 445
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 174/364 (47%), Positives = 251/364 (68%), Gaps = 15/364 (4%)
Query: 1 MGGEVSELVFAKS--RPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAA 58
+GG + ++ AKS PT+++L+GLQG GKTT + KL+ +LK +G+S L+ DVYRPAA
Sbjct: 86 LGG--TNVLIAKSPKAPTIVMLSGLQGAGKTTFAGKLSKHLKSKGESPFLIGADVYRPAA 143
Query: 59 IDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDE 118
QL +L EQV VP +T +I K+G+EEAK + VI+DTAGRL +D+ +M+E
Sbjct: 144 KKQLKVLAEQVKVPSFTIDESTDVIEICKKGIEEAKNAHATYVIIDTAGRLHVDEQLMEE 203
Query: 119 LKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKE 178
L+++K NP E+LLVVD MTGQ+A + TFN + ITG +LTKLDGD+RGGAALSVKE
Sbjct: 204 LQNIKSTFNPHEILLVVDGMTGQDAVNVAKTFNDRLDITGVVLTKLDGDTRGGAALSVKE 263
Query: 179 VSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIM 238
V+GKPIK + GE+++D+ PF+PDR+A RILGMGDV+S VEKAQE + + +A++M++K
Sbjct: 264 VAGKPIKFISEGEKLDDIAPFHPDRLASRILGMGDVVSLVEKAQEAIDENEAKKMEEKFR 323
Query: 239 SANFDFNDFLKQTRTVARMGSMSRVIGMIPGM--GKITPAQVREAEKSLKIMEAMIEAMT 296
FDF DFLKQ + + +MGS++ ++ MIPG+ G I A AEK +K +E +I +MT
Sbjct: 324 KNQFDFEDFLKQFKMIRKMGSLAGIMKMIPGVDTGAIDMAM---AEKEMKRVEGIIFSMT 380
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 356
+ER P++L S R+ R+A+ SG V++L+ Q Q MK +M + G++P L
Sbjct: 381 VQERRDPKILNGS--RKIRIAKGSGVEVNDVNRLIKQFEQ----MKQMMKMFNSGAIPGL 434
Query: 357 SNLE 360
++
Sbjct: 435 GGMK 438
>gi|160886334|ref|ZP_02067337.1| hypothetical protein BACOVA_04343 [Bacteroides ovatus ATCC 8483]
gi|299146818|ref|ZP_07039886.1| signal recognition particle protein [Bacteroides sp. 3_1_23]
gi|336414589|ref|ZP_08594935.1| signal recognition particle protein [Bacteroides ovatus 3_8_47FAA]
gi|423289502|ref|ZP_17268352.1| signal recognition particle protein [Bacteroides ovatus CL02T12C04]
gi|423297356|ref|ZP_17275417.1| signal recognition particle protein [Bacteroides ovatus CL03T12C18]
gi|156108219|gb|EDO09964.1| signal recognition particle protein [Bacteroides ovatus ATCC 8483]
gi|298517309|gb|EFI41190.1| signal recognition particle protein [Bacteroides sp. 3_1_23]
gi|335933701|gb|EGM95703.1| signal recognition particle protein [Bacteroides ovatus 3_8_47FAA]
gi|392666997|gb|EIY60508.1| signal recognition particle protein [Bacteroides ovatus CL03T12C18]
gi|392667213|gb|EIY60723.1| signal recognition particle protein [Bacteroides ovatus CL02T12C04]
Length = 440
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 173/343 (50%), Positives = 236/343 (68%), Gaps = 5/343 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE +E+ +RP VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI
Sbjct: 86 MGGETAEINI-DARPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +L EQ+ VP+Y P +IA+ ++EAK K D+VIVDTAGRL +D+ MM+E+
Sbjct: 145 EQLRVLAEQIEVPMYCELDSKNPVEIAQHAIQEAKAKGYDLVIVDTAGRLAVDEQMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K+ +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 AAIKKAINPDEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAALSIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE++E ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VNKPIKFVGTGEKLEAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP E
Sbjct: 325 NQFDFNDFLSQIAQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPAE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
R PE+L S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 384 RSNPEILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|445376096|ref|ZP_21426599.1| signal recognition particle protein [Streptococcus thermophilus
MTCC 5460]
gi|445390916|ref|ZP_21428322.1| signal recognition particle protein [Streptococcus thermophilus
MTCC 5461]
gi|444750040|gb|ELW74892.1| signal recognition particle protein [Streptococcus thermophilus
MTCC 5461]
gi|444750146|gb|ELW74983.1| signal recognition particle protein [Streptococcus thermophilus
MTCC 5460]
Length = 520
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/353 (48%), Positives = 240/353 (67%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E SE+ + PT+I++ GLQG GKTT + KLAN L K+Q M++A D+YRPAAI
Sbjct: 87 LGSETSEIEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEQEARPMMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I + GLE+A+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTETPAVEIVRNGLEQARANKNDYVLIDTAGRLQIDETLMKEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K +P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E+
Sbjct: 207 RDIKDFAHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAALSIREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ M+PGM P A V+ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NPALANVKVDEKQIARKRAIVLSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPNLL--TPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|239826589|ref|YP_002949213.1| signal recognition particle protein [Geobacillus sp. WCH70]
gi|239806882|gb|ACS23947.1| signal recognition particle protein [Geobacillus sp. WCH70]
Length = 446
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 167/336 (49%), Positives = 244/336 (72%), Gaps = 4/336 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT + KLAN L+K+ + +L A D+YRPAAI
Sbjct: 87 MGGEQSKIAVASRPPTVIMMVGLQGAGKTTTTGKLANLLRKRYNRKPLLAAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D V++DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLNMPVFSLGDQVSPVEIAKQAIEKAKEEHYDYVLIDTAGRLHIDETLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K +K V P E+ LVVDAMTGQ+A + +F+ ++GITG ILTKLDGD+RGGAALS++ V
Sbjct: 207 KQMKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGITGVILTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK VG GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TNTPIKFVGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQAAVDEEKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
A F DFL+Q V ++G + ++ M+PG KI ++ EK + +EA+I +MT E
Sbjct: 327 ATFTLEDFLEQLGQVRKLGPLDEILKMLPGANKIKGLNNLQIDEKQISRVEAIIRSMTKE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
E+ PE++ S R+KR+A+ SG + Q+V++L+ Q
Sbjct: 387 EKMHPEIINGS--RKKRIAKGSGTSVQEVNRLLKQF 420
>gi|329955639|ref|ZP_08296547.1| signal recognition particle protein [Bacteroides clarus YIT 12056]
gi|328526042|gb|EGF53066.1| signal recognition particle protein [Bacteroides clarus YIT 12056]
Length = 440
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 175/357 (49%), Positives = 241/357 (67%), Gaps = 5/357 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE +E+ S+P VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI
Sbjct: 86 MGGETAEINI-DSKPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +L EQ+ VP+Y+ P IA+ ++EAK K D+VIVDTAGRL +D+ MM+E+
Sbjct: 145 EQLRVLAEQIEVPMYSEPDSKDPVAIAQNAIQEAKAKGYDLVIVDTAGRLAVDEEMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 AAIKAAINPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAALSIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTPEE
Sbjct: 325 NQFDFNDFLSQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPEE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 356
R P +L S RR+R+A+ SG Q+V++L+ Q Q R MK + G G +P L
Sbjct: 384 RSNPAILNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTGSKMGKMMPKL 438
>gi|449891169|ref|ZP_21787773.1| signal recognition particle protein [Streptococcus mutans SF12]
gi|449256864|gb|EMC54676.1| signal recognition particle protein [Streptococcus mutans SF12]
Length = 516
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/353 (47%), Positives = 242/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMIGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
+FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|418327699|ref|ZP_12938841.1| signal recognition particle protein [Staphylococcus epidermidis
14.1.R1.SE]
gi|365232729|gb|EHM73715.1| signal recognition particle protein [Staphylococcus epidermidis
14.1.R1.SE]
Length = 455
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 165/346 (47%), Positives = 250/346 (72%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + A PTV+++ GLQG GKTT + KLA + KK K +LVAGD+YRPAAI
Sbjct: 87 MGGENTSIKMANKPPTVVMMIGLQGAGKTTTAGKLALLMRKKYNKKPLLVAGDIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ +PVY+ G +V P QI + L+ AK++++D VI+DTAGRL ID+ +M+EL
Sbjct: 147 DQLQTVGKQIDIPVYSEGDQVSPQQIVENALKHAKEEHLDFVIIDTAGRLHIDETLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++VK + P E++LVVDAMTGQ+A + +F+ ++ ++G LTKLDGD+RGGAALS++ V
Sbjct: 207 QEVKEISKPDEIMLVVDAMTGQDAVNVAQSFDEQLDVSGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ ++K + ++A+I++MTP+
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER PE L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERSNPETLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|222153046|ref|YP_002562223.1| signal recognition particle protein [Streptococcus uberis 0140J]
gi|222113859|emb|CAR41999.1| signal recognition particle protein [Streptococcus uberis 0140J]
Length = 521
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/352 (48%), Positives = 241/352 (68%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+V + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIVKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GT+ +I +GLE A+ D V++DTAGRLQID +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTDHSAVEIVTKGLELARDNRNDYVLIDTAGRLQIDDKLMAEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E+
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + Q+ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDQQRSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF++Q V MG M ++ MIPGM G A ++ EK + A++ +MT E
Sbjct: 327 NTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDEKQIARKRAIVSSMTKE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE PELL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 387 ERENPELL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKAMMQ---GVMSG 433
>gi|237723193|ref|ZP_04553674.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|293372708|ref|ZP_06619090.1| signal recognition particle protein [Bacteroides ovatus SD CMC 3f]
gi|229447715|gb|EEO53506.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|292632517|gb|EFF51113.1| signal recognition particle protein [Bacteroides ovatus SD CMC 3f]
Length = 440
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 173/343 (50%), Positives = 236/343 (68%), Gaps = 5/343 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE +E+ +RP VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI
Sbjct: 86 MGGETAEINI-DARPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +L EQ+ VP+Y P +IA+ ++EAK K D+VIVDTAGRL +D+ MM+E+
Sbjct: 145 EQLRVLAEQIEVPMYCELDSKNPVEIAQHAIQEAKAKGYDLVIVDTAGRLAVDEQMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K+ +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 AAIKKAINPDEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAALSIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE++E ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VNKPIKFVGTGEKLEAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP E
Sbjct: 325 NQFDFNDFLSQIAQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPAE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
R PE+L S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 384 RSNPEILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|449882056|ref|ZP_21784753.1| signal recognition particle protein [Streptococcus mutans SA38]
gi|449924256|ref|ZP_21799534.1| signal recognition particle protein [Streptococcus mutans 4SM1]
gi|449163079|gb|EMB66194.1| signal recognition particle protein [Streptococcus mutans 4SM1]
gi|449250610|gb|EMC48663.1| signal recognition particle protein [Streptococcus mutans SA38]
Length = 516
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/353 (47%), Positives = 242/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQIKVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
+FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|386337727|ref|YP_006033896.1| signal recognition particle, subunit SRP54/Ffh [Streptococcus
gallolyticus subsp. gallolyticus ATCC 43143]
gi|334280363|dbj|BAK27937.1| signal recognition particle, subunit SRP54/Ffh [Streptococcus
gallolyticus subsp. gallolyticus ATCC 43143]
Length = 521
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/353 (48%), Positives = 242/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +EL + PT+I++ GLQGVGKTT + KLAN L K + +++A D+YRPAAI
Sbjct: 87 LGSETAELEKSPKIPTIIMMVGLQGVGKTTFAGKLANKLIKDENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG Q+ VPV+ GT+ +I GL +AK+ + D VI+DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGSQINVPVFDMGTDHSAVEIVTNGLAQAKENHNDYVIIDTAGRLQIDEKLMEEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + NP E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E+
Sbjct: 207 RDVKALANPNEILLVVDSMIGQEAANVADEFNKQLDITGVVLTKIDGDTRGGAALSIREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA + EK++ A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALKNFKVDEKAVARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|189467237|ref|ZP_03016022.1| hypothetical protein BACINT_03622 [Bacteroides intestinalis DSM
17393]
gi|189435501|gb|EDV04486.1| signal recognition particle protein [Bacteroides intestinalis DSM
17393]
Length = 439
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/347 (49%), Positives = 239/347 (68%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE +E+ + +P VIL++GLQG GKTT S KLA LK K+ K +LVA DVYRPAA+
Sbjct: 86 MGGETAEIDL-EGKPAVILMSGLQGSGKTTFSGKLARMLKTKKNKKPLLVACDVYRPAAV 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +L EQ+GVP+Y+ P +IA+ ++EAK K DVVIVDTAGRL +D+ MM+E+
Sbjct: 145 EQLRVLAEQIGVPMYSEPDSKNPVKIAENAIQEAKAKGYDVVIVDTAGRLAVDEEMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K+ +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 AAIKKAINPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAALSIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+++ ++ F+P RM+ RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VNKPIKFVGTGEKLDAIDQFHPSRMSDRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP E
Sbjct: 325 NQFDFNDFLSQIAQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPAE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R P LL S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 384 RSNPALLNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|260886927|ref|ZP_05898190.1| signal recognition particle protein [Selenomonas sputigena ATCC
35185]
gi|330839284|ref|YP_004413864.1| signal recognition particle protein [Selenomonas sputigena ATCC
35185]
gi|260862989|gb|EEX77489.1| signal recognition particle protein [Selenomonas sputigena ATCC
35185]
gi|329747048|gb|AEC00405.1| signal recognition particle protein [Selenomonas sputigena ATCC
35185]
Length = 456
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 174/338 (51%), Positives = 236/338 (69%), Gaps = 6/338 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S L + PTVI++AGLQG GKTT + KL LKKQGK +LVA D+YRPAA+
Sbjct: 87 MGGTQSRLNISSVPPTVIMMAGLQGAGKTTSAGKLGLSLKKQGKKPLLVAADIYRPAAVK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+G+PV++ IA+ ++ A+ DVVI+DTAGRL ID+ +M ELK
Sbjct: 147 QLQVLGEQLGIPVFSMPQGTDAVTIARSSIDHARSHINDVVIIDTAGRLHIDEKLMQELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K + P E+LLVVDAMTGQ+A + +FN +GI G +LTKLDGD+RGGAALSVK V+
Sbjct: 207 DIKADVKPHEILLVVDAMTGQDAVNVAESFNEGLGIDGVVLTKLDGDARGGAALSVKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE++E LEPF+PDRMA RILGMGDVLS +EKAQ E+A++M+KK+ A
Sbjct: 267 GCPIKFVGMGEKLEALEPFHPDRMASRILGMGDVLSLIEKAQSTFDAEEAKKMEKKLRKA 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEAMIEAMT 296
+F +DFL Q + V ++GS +++GMIPGMG ++ + K ++ +EA+I++MT
Sbjct: 327 DFTLDDFLAQMQKVRKLGSFEQILGMIPGMGGLKKQLQGQDIDLNGKEVRRIEAIIKSMT 386
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
P+ER ++ S RRKR+A SG Q V++L+ Q
Sbjct: 387 PKERADISIINGS--RRKRIALGSGTRVQDVNKLLKQF 422
>gi|319901661|ref|YP_004161389.1| signal recognition particle subunit FFH/SRP54 (srp54) [Bacteroides
helcogenes P 36-108]
gi|319416692|gb|ADV43803.1| signal recognition particle subunit FFH/SRP54 (srp54) [Bacteroides
helcogenes P 36-108]
Length = 440
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/347 (49%), Positives = 240/347 (69%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE +E+ S+P+VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI
Sbjct: 86 MGGETAEINI-DSKPSVILMSGLQGSGKTTFSGKLARMLKAKKNRKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +L EQ+ VP+Y+ P IA+ ++EAK+K D+VIVDTAGRL +D+ MM+E+
Sbjct: 145 EQLRVLAEQIEVPMYSEPDSKDPVTIAQNAIQEAKEKGYDLVIVDTAGRLAVDEEMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K+ ++P E+L VVD+MTGQ+A FN + G ILTKLDGD+RGGAALS++ V
Sbjct: 205 AAIKKAIDPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVILTKLDGDTRGGAALSIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP E
Sbjct: 325 NQFDFNDFLNQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIHSMTPAE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 384 RSNPEILNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|295696070|ref|YP_003589308.1| signal recognition particle protein [Kyrpidia tusciae DSM 2912]
gi|295411672|gb|ADG06164.1| signal recognition particle protein [Kyrpidia tusciae DSM 2912]
Length = 445
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/348 (48%), Positives = 243/348 (69%), Gaps = 4/348 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG+ S L + RP V++L GLQG GKTT + KLA +++KQG+ +LVA DVYRPAA+
Sbjct: 88 LGGKPSTLNLS-GRPAVVMLVGLQGAGKTTTAGKLAQWVRKQGRRPLLVAADVYRPAAVR 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LGE + VPV++ + P +I+K LE A ++ DVV+VDTAGRL +D A+M+EL+
Sbjct: 147 QLQTLGEALKVPVFSVDGDADPVEISKSSLERASQEGCDVVLVDTAGRLHVDDALMEELE 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E+LLVVDAMTGQ A + F+ +G+TGAI TKLDGD++GGAALS+ V+
Sbjct: 207 RMKAAVVPGEILLVVDAMTGQSAVEVAEAFHGRLGLTGAIFTKLDGDTKGGAALSILSVA 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK G GE+++ LEPFYPDRMA RILGMGDVL+ +EKAQ+ + E A+++++++ +
Sbjct: 267 GCPIKFAGVGEKLDALEPFYPDRMASRILGMGDVLTLIEKAQQTVDAEKAKQLERQLRAG 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEE 299
F DFL Q R V ++G + +++GM+PGM KI ++ E+ L +EA+I +MTPEE
Sbjct: 327 EFSLEDFLDQLRQVRKLGPLDQLLGMLPGMNKIKGLGNLQVDERQLGRVEAIILSMTPEE 386
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
R +PEL+ S RR+R+A SG + V +L+ Q +MR MK G+
Sbjct: 387 RRRPELIDAS--RRRRIASGSGTRVEDVGRLLKQFKEMRKMMKQFSGM 432
>gi|257425291|ref|ZP_05601716.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257430584|ref|ZP_05606966.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 68-397]
gi|257433345|ref|ZP_05609703.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus E1410]
gi|257436187|ref|ZP_05612234.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus M876]
gi|282914013|ref|ZP_06321800.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus M899]
gi|282924058|ref|ZP_06331734.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus C101]
gi|293510006|ref|ZP_06668714.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus M809]
gi|293526593|ref|ZP_06671278.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus M1015]
gi|257271748|gb|EEV03886.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257278712|gb|EEV09331.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 68-397]
gi|257281438|gb|EEV11575.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus E1410]
gi|257284469|gb|EEV14589.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus M876]
gi|282314030|gb|EFB44422.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus C101]
gi|282322081|gb|EFB52405.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus M899]
gi|290920665|gb|EFD97728.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus M1015]
gi|291466950|gb|EFF09468.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus M809]
Length = 455
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 165/346 (47%), Positives = 248/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI
Sbjct: 87 MGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 NQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K+VK + P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGG ALS++ V
Sbjct: 207 KEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGVALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|315924205|ref|ZP_07920431.1| signal recognition particle protein [Pseudoramibacter alactolyticus
ATCC 23263]
gi|315622607|gb|EFV02562.1| signal recognition particle protein [Pseudoramibacter alactolyticus
ATCC 23263]
Length = 449
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 175/345 (50%), Positives = 241/345 (69%), Gaps = 5/345 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGK-SCMLVAGDVYRPAAI 59
+GGE+ L KS + ++ GLQG GKTT + K+AN L+K+ K +LVA DVYRPAAI
Sbjct: 88 LGGEIKPLELQKSDLNIFMMVGLQGAGKTTTAGKIANLLRKENKLKPLLVACDVYRPAAI 147
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +LGEQ+ +PVYT +P IA Q + A+K+ ++VI+DTAGRLQID+ +M EL
Sbjct: 148 DQLKVLGEQLDIPVYTMPGMKEPRIIANQAISYAQKQGYNLVILDTAGRLQIDERLMREL 207
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
D+K +++PTE LLVVD MTGQE+ + +F+ ++ I+G +LTKLDGD+RGGAALSV
Sbjct: 208 MDIKELVHPTETLLVVDGMTGQESVNVAKSFDDQLDISGVVLTKLDGDTRGGAALSVTYT 267
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPI +G GE++ DLE F+PDRMA RILGMGDVLS ++KAQE++ +E A M++KI
Sbjct: 268 TGKPIVFIGSGEKLSDLERFHPDRMASRILGMGDVLSLIDKAQEMVDEEQARAMEEKIRK 327
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
A FD +DFL Q + +MGS++ ++ M+PGM K A + + E+ K EA+I AMTP
Sbjct: 328 ATFDLSDFLDQLHQLQKMGSLTSLLEMMPGMNKKALAGLDMVKTEQQTKRTEAIIYAMTP 387
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
EER KPE++ S RRKR+A SG + V++L+ Q R MK
Sbjct: 388 EERAKPEIINGS--RRKRIANGSGTSVADVNRLLKGFDQSRKMMK 430
>gi|16800981|ref|NP_471249.1| hypothetical protein lin1915 [Listeria innocua Clip11262]
gi|423098710|ref|ZP_17086418.1| signal recognition particle protein [Listeria innocua ATCC 33091]
gi|16414416|emb|CAC97145.1| ffh [Listeria innocua Clip11262]
gi|370794537|gb|EHN62300.1| signal recognition particle protein [Listeria innocua ATCC 33091]
Length = 450
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/346 (49%), Positives = 248/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI
Sbjct: 87 MGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK++++D VI+DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEEHLDYVIIDTAGRLHIDETLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K VK + PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KQVKEIATPTEILLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK V GE+ME +E F+PDRMA RILGMGDVLS +EKAQ + E + M++K+
Sbjct: 267 TGKPIKFVATGEKMEAIETFHPDRMASRILGMGDVLSLIEKAQTDVDAEKMKAMEQKMKD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
+ +DFL Q + V +MG + ++ M+PG K+ ++ +K L +EA+I++MT
Sbjct: 327 NSMTLDDFLDQLQQVKQMGPLDELLKMMPGANKMKGLDNMQVDDKQLGHIEAIIKSMTKN 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E++ P+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 387 EKDNPDIINAS--RRKRIARGSGRPIQEINRLLKQFAEMKKMMKQM 430
>gi|424787751|ref|ZP_18214515.1| signal recognition particle protein [Streptococcus intermedius BA1]
gi|422113505|gb|EKU17243.1| signal recognition particle protein [Streptococcus intermedius BA1]
Length = 524
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 173/355 (48%), Positives = 245/355 (69%), Gaps = 13/355 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEAARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV++ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFSLGTEVAAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV ++
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNDQLEVTGVILTKIDGDTRGGAALSVCQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAM 295
FDFNDF+ Q V MG M ++ MIPGM PA +V E E + K A++ +M
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPAMKNFKVDENEIARK--RAIVSSM 383
Query: 296 TPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
TP ERE P LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 384 TPAERENPNLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSVMQ---GVMSG 433
>gi|423068523|ref|ZP_17057311.1| signal recognition particle protein [Streptococcus intermedius
F0395]
gi|355366778|gb|EHG14495.1| signal recognition particle protein [Streptococcus intermedius
F0395]
Length = 524
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/355 (48%), Positives = 246/355 (69%), Gaps = 13/355 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+ +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEAARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV++ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFSLGTEVPAVEIIRQGLEQAKANHNDYVLIDTAGRLQIDEKLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+P+RM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPNRMSSRILGMGDMLTLIEKASQEYDEQKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAM 295
FDFNDF+ Q V MG M ++ MIPGM PA +V E E + K A++ +M
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPAMKNFKVDENEIARK--RAIVSSM 383
Query: 296 TPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
TP ERE P LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 384 TPAERENPNLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSVMQ---GVMSG 433
>gi|302389629|ref|YP_003825450.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermosediminibacter oceani DSM 16646]
gi|302200257|gb|ADL07827.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermosediminibacter oceani DSM 16646]
Length = 446
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/344 (50%), Positives = 238/344 (69%), Gaps = 3/344 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG + + L + S+ V+++ GLQG GKTT S KL YL K+GK +LVA D+YRPAAI
Sbjct: 87 MGPKEARLNISPSKVNVVMMVGLQGSGKTTTSGKLGLYLSKKGKRPLLVAADIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++GE++G+PV+T G E P I+K +E A + N DVVI+DTAGRL +D +M EL
Sbjct: 147 QLQVVGEKIGLPVFTMG-EQNPVNISKAAVEYASRHNNDVVIIDTAGRLHVDDELMQELI 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K +NP E+LLVVD+MTGQ+A + TF+ ++ +TG ILTKLDGD+RGGAALS+K V+
Sbjct: 206 NIKDAVNPDEILLVVDSMTGQDAVNVAETFHNKLQLTGLILTKLDGDTRGGAALSIKAVT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE++ DLEPFYP+RMA RILGMGDVLS +EKA + Q A E+++KI
Sbjct: 266 GCPIKFVGMGEKLTDLEPFYPERMASRILGMGDVLSLIEKATAAIDQNKARELEEKIRKE 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F +DFL+Q + V +MGS+ +++ MIPG+ V EK L +EA+I +MT EER
Sbjct: 326 EFTLDDFLEQLKQVRKMGSLDQILSMIPGLSPQKLQGVEFNEKELVHIEAIINSMTKEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
P ++ S RR+R+A SG + Q V++L+ Q Q + +K L
Sbjct: 386 MNPSIINGS--RRRRIAMGSGTSVQDVNRLLKQFEQTKKMVKQL 427
>gi|311746104|ref|ZP_07719889.1| signal recognition particle protein [Algoriphagus sp. PR1]
gi|126576323|gb|EAZ80601.1| signal recognition particle protein [Algoriphagus sp. PR1]
Length = 444
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 177/372 (47%), Positives = 248/372 (66%), Gaps = 15/372 (4%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG E+ + P+V+L++GLQG GKTT S KLA+ LKKQG+ +LVA D+YRPAAID
Sbjct: 86 MGGTKVEINLS-GDPSVVLISGLQGSGKTTFSGKLASLLKKQGRQVLLVACDIYRPAAID 144
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQVGV VY +IA + AKK VIVDTAGRL +D+ MM E++
Sbjct: 145 QLKVLGEQVGVEVYAEPENKNALEIANNAIAYAKKSGKKTVIVDTAGRLAVDEQMMQEIE 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K+ LNP+E L VVD+MTGQ+A TF+ + G +LTKLDGD+RGGAA+S++ V
Sbjct: 205 ALKKALNPSETLFVVDSMTGQDAVNTAKTFDERLDFNGVVLTKLDGDTRGGAAISIRHVV 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK + GE+ME+++ F+PDRM+ RILGMGDV+S VE+AQ+ +++A+ + KI
Sbjct: 265 NKPIKFISTGEKMENIDVFHPDRMSQRILGMGDVISLVERAQQSFDEDEAKRINAKIRQN 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
NF+F+DFL Q V +MG++ ++GMIPGMGK + + S K +EA+I++MTP+ER
Sbjct: 325 NFNFDDFLSQLEQVKKMGNIKDLMGMIPGMGKAMKG-LDIDDDSFKPIEAIIKSMTPKER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 360
+P+++ S RRKR+A SG+T +V+ L+ Q MR MK + + GG+ A+S L
Sbjct: 384 HQPDIIDGS--RRKRIANGSGRTITEVNNLMKQFSDMRKMMKQMNKM--GGAKAAMSKL- 438
Query: 361 DALKSEQKAPPG 372
PPG
Sbjct: 439 --------MPPG 442
>gi|312862888|ref|ZP_07723128.1| signal recognition particle protein [Streptococcus vestibularis
F0396]
gi|322516902|ref|ZP_08069799.1| signal recognition particle protein [Streptococcus vestibularis
ATCC 49124]
gi|311101748|gb|EFQ59951.1| signal recognition particle protein [Streptococcus vestibularis
F0396]
gi|322124525|gb|EFX96007.1| signal recognition particle protein [Streptococcus vestibularis
ATCC 49124]
Length = 520
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 169/353 (47%), Positives = 240/353 (67%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E SE+ + PT+I++ GLQG GKTT + KLAN L K+Q M++ D+YRPAAI
Sbjct: 87 LGSETSEIEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEQEARPMMIGADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I + GLE+A+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTETPAVEIVRNGLEQARANKNDYVLIDTAGRLQIDETLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K +P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E+
Sbjct: 207 RDIKGFAHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAALSIREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ M+PGM P A V+ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NPALANVKVDEKQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|116629442|ref|YP_814614.1| Signal recognition particle GTPase [Lactobacillus gasseri ATCC
33323]
gi|311110910|ref|ZP_07712307.1| signal recognition particle protein [Lactobacillus gasseri MV-22]
gi|420147406|ref|ZP_14654682.1| Signal recognition particle protein [Lactobacillus gasseri CECT
5714]
gi|116095024|gb|ABJ60176.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Lactobacillus gasseri ATCC 33323]
gi|311066064|gb|EFQ46404.1| signal recognition particle protein [Lactobacillus gasseri MV-22]
gi|398401407|gb|EJN54909.1| Signal recognition particle protein [Lactobacillus gasseri CECT
5714]
Length = 476
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 175/362 (48%), Positives = 247/362 (68%), Gaps = 11/362 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L ++ PT+I++ GLQG GKTT KLANYL K K+ +L+AGD+YRPAAI
Sbjct: 87 MGEEAVSLNKSQHIPTIIMMVGLQGTGKTTTVGKLANYLMKNEKARPLLIAGDIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ VPVY+ + ++I K GLEEA K D V++DTAGRL+ID+ +MDEL
Sbjct: 147 DQLKQIGQQLNVPVYSEDNQ-DVAEIVKHGLEEADKNKNDYVLIDTAGRLEIDEQLMDEL 205
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K V V +P LLVVDAMTGQ A + FN ++ +TG ILTKLDGD+RGGAALS++ V
Sbjct: 206 KRVTAVAHPDNTLLVVDAMTGQAATQVAEGFNNDLDLTGIILTKLDGDTRGGAALSIRAV 265
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PI G+GE++ DL F+PDRMA RILGMGD+L+ +EKAQ+ ++AE+M +K+
Sbjct: 266 TGLPIIFTGQGEKLTDLSTFHPDRMASRILGMGDMLTLIEKAQQDYDAKEAEKMAEKMRE 325
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V +MG + ++I MIPG+G PA ++ EK + ++A++ +MTP
Sbjct: 326 NTFDFNDFIDQMDQVQKMGPLDQIIKMIPGLGN-NPALKNIQIPEKQISHIKAIVYSMTP 384
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
EERE P++L +P RR+R+A SG++ +V++++ Q Q K +M M G + +
Sbjct: 385 EERENPDIL--NPSRRRRIAAGSGRSIAEVNRMIKQFKQ----SKEMMQKMTKGDMGEFA 438
Query: 358 NL 359
NL
Sbjct: 439 NL 440
>gi|436840520|ref|YP_007324898.1| signal recognition particle-like (SRP) GTPase [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
gi|432169426|emb|CCO22794.1| signal recognition particle-like (SRP) GTPase [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
Length = 508
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 169/339 (49%), Positives = 238/339 (70%), Gaps = 4/339 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GGE L F K + + I++ GLQG GKTT SAK+A YL+++ LV D+YRPAAI+
Sbjct: 86 LGGEQEGLNFTKGKLSKIMMVGLQGAGKTTSSAKIALYLRRKKFKPYLVPADIYRPAAIE 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG+Q+ +PVY + TE+ P I + L +A++ DVV+ DTAGRL ID+ +MDEL
Sbjct: 146 QLNVLGKQLDMPVYPSTTEMNPVDICRDALSKAEEAGCDVVLFDTAGRLHIDETLMDELV 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K P E+L V DAMTGQ+A + +TF+ ++GITG +LTK+DGD+RGGAALS+K V+
Sbjct: 206 SIKAACAPDEILFVADAMTGQDAVNVASTFDEKLGITGVVLTKMDGDARGGAALSIKSVT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GK +K VG GE++ +LE FYPDR A RILGMGDVLS +EKAQ VM + +AE++ K A
Sbjct: 266 GKAVKFVGMGEKLSELELFYPDRAASRILGMGDVLSLIEKAQSVMGEGEAEKLTDKFRKA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPE 298
FD DF Q R + ++GSMS ++ MIPG+GK+T + +K L +EA+I +MT E
Sbjct: 326 QFDLEDFRTQMRRMKKIGSMSSIMKMIPGLGKLTKQLGDIEVPDKELNRIEAIISSMTME 385
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQM 337
ER+KP+L+ +P RR+R+A+ SG Q+V+Q++ QM
Sbjct: 386 ERKKPKLI--NPSRRQRIAKGSGVEVQEVNQMLKNFEQM 422
>gi|372222922|ref|ZP_09501343.1| signal recognition particle protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 442
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 172/335 (51%), Positives = 230/335 (68%), Gaps = 5/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG+ +E V P+VIL++GLQG GKTT S KLAN+LK K+ K +LVA DVYRPAAI
Sbjct: 86 MGGD-AEGVDLSGNPSVILMSGLQGSGKTTFSGKLANFLKNKKTKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ++GEQ+GV VY+ P IA+ G+ AK +VVI+DTAGRL +D+ MMDE+
Sbjct: 145 DQLHVVGEQIGVEVYSDRGNTDPVAIAQAGIAHAKTLGCNVVIIDTAGRLAVDQEMMDEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++ + + P E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAA+S+K V
Sbjct: 205 SNIHKAIQPQETLFVVDSMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAAISIKSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+ME ++ FYP RMA RILGMGDV+S VE+AQE +E A ++QKKI
Sbjct: 265 VNKPIKFIGTGEKMEAIDVFYPSRMADRILGMGDVVSLVERAQEQFDEEQARKIQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFL Q + + +MG+M ++GMIPGMGK + + + K +EA+I +MTP+E
Sbjct: 325 NKFGFDDFLSQIQQIKKMGNMKDLMGMIPGMGKALKG-IDIDDDAFKHIEAIIHSMTPDE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
R P L S R+KR+A SG++ Q V+QL+ Q
Sbjct: 384 RANPNKLNSS--RKKRIAAGSGRSVQDVNQLLKQF 416
>gi|262409622|ref|ZP_06086162.1| signal recognition particle protein [Bacteroides sp. 2_1_22]
gi|294643466|ref|ZP_06721279.1| signal recognition particle protein [Bacteroides ovatus SD CC 2a]
gi|294807908|ref|ZP_06766689.1| signal recognition particle protein [Bacteroides xylanisolvens SD
CC 1b]
gi|298484340|ref|ZP_07002501.1| signal recognition particle protein [Bacteroides sp. D22]
gi|336405957|ref|ZP_08586623.1| signal recognition particle protein [Bacteroides sp. 1_1_30]
gi|345509533|ref|ZP_08789129.1| signal recognition particle protein [Bacteroides sp. D1]
gi|383113535|ref|ZP_09934307.1| signal recognition particle protein [Bacteroides sp. D2]
gi|423216105|ref|ZP_17202631.1| signal recognition particle protein [Bacteroides xylanisolvens
CL03T12C04]
gi|229447054|gb|EEO52845.1| signal recognition particle protein [Bacteroides sp. D1]
gi|262352475|gb|EEZ01575.1| signal recognition particle protein [Bacteroides sp. 2_1_22]
gi|292641185|gb|EFF59390.1| signal recognition particle protein [Bacteroides ovatus SD CC 2a]
gi|294444906|gb|EFG13592.1| signal recognition particle protein [Bacteroides xylanisolvens SD
CC 1b]
gi|295087957|emb|CBK69480.1| signal recognition particle subunit FFH/SRP54 (srp54) [Bacteroides
xylanisolvens XB1A]
gi|298269494|gb|EFI11094.1| signal recognition particle protein [Bacteroides sp. D22]
gi|313695700|gb|EFS32535.1| signal recognition particle protein [Bacteroides sp. D2]
gi|335936211|gb|EGM98149.1| signal recognition particle protein [Bacteroides sp. 1_1_30]
gi|392691151|gb|EIY84401.1| signal recognition particle protein [Bacteroides xylanisolvens
CL03T12C04]
Length = 440
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 173/343 (50%), Positives = 235/343 (68%), Gaps = 5/343 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE +E+ +RP VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI
Sbjct: 86 MGGETAEINI-DARPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +L EQ+ VP+Y P +IA+ ++EAK K D+VIVDTAGRL +D+ MM+E+
Sbjct: 145 EQLRVLAEQIEVPMYCELDSKNPVEIAQHAIQEAKAKGYDLVIVDTAGRLAVDEQMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 AAIKEAINPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAALSIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE++E ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VNKPIKFVGTGEKLEAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP E
Sbjct: 325 NQFDFNDFLSQIAQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPAE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
R PE+L S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 384 RSNPEILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|198275694|ref|ZP_03208225.1| hypothetical protein BACPLE_01869 [Bacteroides plebeius DSM 17135]
gi|198271323|gb|EDY95593.1| signal recognition particle protein [Bacteroides plebeius DSM
17135]
Length = 443
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 174/347 (50%), Positives = 239/347 (68%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG+ +E+ K RP VIL++GLQG GKTT S KLA +K K+ + +LVA DVYRPAAI
Sbjct: 86 MGGDTAEIEL-KGRPAVILMSGLQGSGKTTFSGKLARMMKSKKNRKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +LG+Q+ VPVY+ P QIA ++EAK K D+VIVDTAGRL ID+ MM+E+
Sbjct: 145 EQLKVLGQQIEVPVYSELDSKDPVQIALNAIQEAKAKGYDLVIVDTAGRLAIDEQMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K+ +NP L VVDAMTGQ+A FN + TG +LTKLDGD+RGGAALS++ V
Sbjct: 205 EAIKKAINPDATLFVVDAMTGQDAVNTAREFNERLDFTGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPI VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VNKPIMFVGTGEKLDAVDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTPEE
Sbjct: 325 NQFDFNDFLTQIHQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPEE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R PE+L + RR R+A+ SG + Q+V++L+ Q Q R MK + G
Sbjct: 384 RTHPEIL--NGTRRTRIAKGSGTSIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|422410043|ref|ZP_16487004.1| signal recognition particle protein [Listeria monocytogenes FSL
F2-208]
gi|313608187|gb|EFR84220.1| signal recognition particle protein [Listeria monocytogenes FSL
F2-208]
Length = 450
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 171/346 (49%), Positives = 247/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI
Sbjct: 87 MGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK++++D VI+DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEEHLDYVIIDTAGRLHIDETLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K VK + PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KQVKEIAAPTEILLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK + GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + E + M++K+
Sbjct: 267 TGKPIKFIATGEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDAEKMKAMEQKMKD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
+ +DFL Q + V +MG + ++ M+PG K+ + +K L +EA+I++MT
Sbjct: 327 NSMTLDDFLDQLQQVKQMGPLDELLKMMPGANKMKGLDNMNVDDKQLGHIEAIIKSMTKN 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E++ P+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 387 EKDNPDIINAS--RRKRIARGSGRPVQEINRLLKQFAEMKKMMKQM 430
>gi|225018488|ref|ZP_03707680.1| hypothetical protein CLOSTMETH_02435 [Clostridium methylpentosum
DSM 5476]
gi|224948689|gb|EEG29898.1| hypothetical protein CLOSTMETH_02435 [Clostridium methylpentosum
DSM 5476]
Length = 453
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 173/345 (50%), Positives = 239/345 (69%), Gaps = 6/345 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG E + + F P VI++ GLQG GKTT SAKLA Y K QG +LVA DVYRPAAI
Sbjct: 87 MGSEHTRIEFPSKPPCVIMMCGLQGSGKTTHSAKLAKYFKSQGHRPLLVACDVYRPAAIQ 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++GE+ G V+ G P +IAK+ L+ AK D+VI+DTAGRL ID+ +M+ELK
Sbjct: 147 QLKVVGEKAGASVFEMGN-TDPVEIAKEALKHAKDYGNDLVILDTAGRLHIDEQLMNELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K +NP E+LLVVD+MTGQ+A + +FN + I G ILTKLDGD+RGGAALSV V+
Sbjct: 206 NIKAEVNPNEILLVVDSMTGQDAVNVAKSFNETLEIDGVILTKLDGDTRGGAALSVLAVT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKP+K G GE+++DLEPF+P+RMA RILGMGDVL+ +EKA E + +++A M KK+
Sbjct: 266 GKPVKFAGIGEKLDDLEPFHPERMASRILGMGDVLTLIEKAGENVSEKEAARMAKKLKEN 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIEAMTPEE 299
FD ND L Q + + +MGS+ ++ +IPG+G KI A + E++ + +EA+I +MT E
Sbjct: 326 KFDMNDLLDQMKQIQKMGSIKSILSIIPGVGEKIKDADIDESQ--MTRIEAIITSMTIAE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
REKP ++ +P R++R+A SG Q V++L+ Q M+ MK L
Sbjct: 384 REKPSII--NPSRKRRIAAGSGTQVQDVNRLLKQFEDMQKMMKQL 426
>gi|337281992|ref|YP_004621463.1| signal recognition particle protein [Streptococcus parasanguinis
ATCC 15912]
gi|335369585|gb|AEH55535.1| signal recognition particle protein [Streptococcus parasanguinis
ATCC 15912]
Length = 523
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 168/353 (47%), Positives = 248/353 (70%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G E +E++ + PT+I++ GLQG GKTT + KLAN L K+ K+ +++A D+YRPAAI
Sbjct: 87 LGSETAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLVKEEKARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV++ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFSLGTEVPAVEIVRQGLEQARANHNDYVLIDTAGRLQIDEKLMGEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK ++ P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDVKALVEPNEILLVVDAMIGQEAANVAREFNEQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+GRILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSGRILGMGDMLTLIEKASQEYDEKRSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ M+PGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NPAMKNLKVDEREIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GV+ G
Sbjct: 386 AERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|212703525|ref|ZP_03311653.1| hypothetical protein DESPIG_01570 [Desulfovibrio piger ATCC 29098]
gi|212673025|gb|EEB33508.1| signal recognition particle protein [Desulfovibrio piger ATCC
29098]
Length = 502
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 169/350 (48%), Positives = 238/350 (68%), Gaps = 6/350 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GGE + L P VI+L GLQG GKTT + K+AN L+KQ LV DVYRPAAID
Sbjct: 86 LGGETAGLNLQGQEPAVIMLVGLQGSGKTTSAGKIANLLRKQKMRPYLVPADVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +L +Q+ +P + + ++ P IA+Q +E A+++ VV++DTAGRL +D+ +M EL
Sbjct: 146 QLTVLAKQLDMPCFPSTVDMNPVDIARQAMEAAREQQATVVLLDTAGRLHVDEPLMQELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K +NP E+L V DAMTGQ+A + +FN +G+TG +LTK+DGD+RGGAALS++ V+
Sbjct: 206 AIKAAVNPQEILFVADAMTGQDAVTVAESFNERLGLTGVVLTKMDGDARGGAALSIRAVT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G P+K VG GE++ ++E F+PDR+AGRILGMGDVL+ VEKAQ + ++AE + KK+ A
Sbjct: 266 GAPVKFVGMGEKLSEMEIFHPDRIAGRILGMGDVLTLVEKAQATIDADEAEALAKKMRKA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEAMIEAMT 296
+FD DF Q R + ++GS+ ++ MIPGMG K+ A EK + EA+I +MT
Sbjct: 326 SFDLEDFRTQMRRIKKLGSLDSILKMIPGMGGLREKLAEANGAMPEKEMARTEAIINSMT 385
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
ER P++L S RR R+A+ +G T QQV+QLV Q QMR MK +MG
Sbjct: 386 MAERRNPDILNGS--RRARIAKGAGVTVQQVNQLVRQFEQMRQMMKGMMG 433
>gi|29347011|ref|NP_810514.1| signal recognition protein [Bacteroides thetaiotaomicron VPI-5482]
gi|383125386|ref|ZP_09946027.1| signal recognition particle protein [Bacteroides sp. 1_1_6]
gi|29338909|gb|AAO76708.1| putative signal recognition protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|251837780|gb|EES65870.1| signal recognition particle protein [Bacteroides sp. 1_1_6]
Length = 440
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 173/343 (50%), Positives = 236/343 (68%), Gaps = 5/343 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE E+ +SRP VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI
Sbjct: 86 MGGETVEINL-ESRPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +L EQ+ VP+Y+ P +IA+ ++EAK K D+VIVDTAGRL +D+ MM+E+
Sbjct: 145 EQLRVLAEQIEVPMYSELDSKNPVEIAQHAIQEAKAKGYDLVIVDTAGRLAVDEQMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 TAIKEAINPDEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAALSIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP E
Sbjct: 325 NQFDFNDFLSQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPAE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
R PE+L S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 384 RSNPEILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|424780553|ref|ZP_18207426.1| Signal recognition particle, subunit Ffh SRP54 [Catellicoccus
marimammalium M35/04/3]
gi|422842955|gb|EKU27402.1| Signal recognition particle, subunit Ffh SRP54 [Catellicoccus
marimammalium M35/04/3]
Length = 478
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 171/342 (50%), Positives = 242/342 (70%), Gaps = 8/342 (2%)
Query: 15 PTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPV 73
PT+I++ GLQG GKTT + KLAN LK+ K+ +L+AGDVYRPAAIDQL +GE + VPV
Sbjct: 101 PTIIMMVGLQGAGKTTFAGKLANDLKQNQKARPLLIAGDVYRPAAIDQLKTVGEMIDVPV 160
Query: 74 YTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLL 133
+ GTEV P +I +QGLE A +K D VI+DTAGRL ID+A+M ELK++K + P E+LL
Sbjct: 161 FELGTEVSPVEIVRQGLELAHEKKNDYVIIDTAGRLHIDEALMTELKEIKELAQPDEILL 220
Query: 134 VVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERM 193
VDAM+GQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPIK VG GE+M
Sbjct: 221 TVDAMSGQDAVNVAESFNEQLDITGVVLTKLDGDTRGGAALSIRAVTGKPIKFVGTGEKM 280
Query: 194 EDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRT 253
+E F+PDRM+ RILGMGD+L+ ++KA + ++ A E+ +K+ + FDFNDF++Q
Sbjct: 281 NAIEVFHPDRMSSRILGMGDLLTLIDKASKEFDEKKALEVTEKMRANTFDFNDFIEQLDQ 340
Query: 254 VARMGSMSRVIGMIPGMGKITPAQVREAE-KSLKIMEAMIEAMTPEEREKPELLAESPVR 312
+ MG + +I MIPGM +I E + K + AMI +MT EER+ P+LL +P R
Sbjct: 341 MMNMGPLEDLIKMIPGMSQIPGMNNIEIDHKEIARKRAMILSMTEEERQNPDLL--NPSR 398
Query: 313 RKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 354
R+R+A+ SG +E +V++++ Q Q R +M M G++P
Sbjct: 399 RRRIARGSGNSEIEVNRMIKQFKQSR----KMMSDMTKGNMP 436
>gi|450071676|ref|ZP_21848262.1| signal recognition particle protein [Streptococcus mutans M2A]
gi|449212110|gb|EMC12488.1| signal recognition particle protein [Streptococcus mutans M2A]
Length = 516
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 168/353 (47%), Positives = 242/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GT+ +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQIKVPVFDMGTDHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
+FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEDEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|419800021|ref|ZP_14325332.1| signal recognition particle protein [Streptococcus parasanguinis
F0449]
gi|385696390|gb|EIG26878.1| signal recognition particle protein [Streptococcus parasanguinis
F0449]
Length = 523
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 168/353 (47%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E++ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV++ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFSLGTEVPAVEIVRQGLEQARANHNDYVLIDTAGRLQIDEKLMGEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDVKALAKPNEILLVVDAMIGQEAANVAREFNEQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+GRILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSGRILGMGDMLTLIEKASQEYDEKRSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ M+PGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NPAMKNLKVDEREIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG T +V++ + Q + M+ GV+ G
Sbjct: 386 AERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|294507645|ref|YP_003571703.1| signal recognition particle protein [Salinibacter ruber M8]
gi|294343973|emb|CBH24751.1| signal recognition particle protein [Salinibacter ruber M8]
Length = 461
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 174/368 (47%), Positives = 250/368 (67%), Gaps = 9/368 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GGE + A++ PTVIL+AGLQG GKTT AKLA + +K+G + +L A DVYRPAA+D
Sbjct: 86 LGGEHEGIEMAETPPTVILVAGLQGSGKTTFCAKLARHFRKEGHAPLLAASDVYRPAAVD 145
Query: 61 QLVILGEQVGVPVYTA---GTEVKPS-QIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMM 116
QL L +QV PVY+ G V+ + ++A + + EA+ D+VI+DTAGR+ ID+AMM
Sbjct: 146 QLKTLADQVNAPVYSIEDDGEIVEDAVRVANEAVAEAQNTARDIVIIDTAGRMHIDEAMM 205
Query: 117 DELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSV 176
E++D+K + P E L VVD+MTGQ+A FN I G +L+KLDGD+RGGAALS+
Sbjct: 206 QEVEDIKTTVAPNETLFVVDSMTGQDAVNTAKEFNERIDYDGVVLSKLDGDTRGGAALSI 265
Query: 177 KEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKK 236
+ V KPIK GE+++ L PFYPDRMA RILGMGDV+SFVE+AQE +++AE +Q+K
Sbjct: 266 RTVVNKPIKFASTGEKLDALTPFYPDRMAQRILGMGDVVSFVERAQEQYDEQEAERLQEK 325
Query: 237 IMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIEAM 295
I S FD DF Q + + +MGS+ ++GMIPG+G KI+ + E++ +EA+I++M
Sbjct: 326 IRSEEFDLQDFYDQLQRIQKMGSIKELMGMIPGVGNKISDLDID--EEAFTHIEAIIQSM 383
Query: 296 TPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPA 355
TPEER P++L + RR+R+A+ SG + V+QLV+Q +M+ MK + + G
Sbjct: 384 TPEERAHPDIL--NGTRRRRIARGSGNEVRDVNQLVSQFEEMKDMMKTMQKMTSKGQDVD 441
Query: 356 LSNLEDAL 363
+S+L D +
Sbjct: 442 ISSLMDKI 449
>gi|387133281|ref|YP_006299253.1| signal recognition particle protein [Prevotella intermedia 17]
gi|386376129|gb|AFJ09513.1| signal recognition particle protein [Prevotella intermedia 17]
Length = 450
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 177/360 (49%), Positives = 243/360 (67%), Gaps = 5/360 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG+ + +++P +IL++GLQG GKTT S KLAN LK K+ K +LVA DVYRPAAI
Sbjct: 86 MGGDAVGIKL-ENKPAIILMSGLQGSGKTTFSGKLANLLKTKEHKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL ++GE VGVPVY+ + IA+ +++AK DVVI+DTAGRL +D MMDE+
Sbjct: 145 QQLNVVGESVGVPVYSEPENKNVNAIAENAIKQAKANGNDVVIIDTAGRLAVDAEMMDEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K +NP EVL VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 ESLKNHVNPDEVLFVVDSMTGQDAVNTAKEFNDRLNFDGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+ME L+ F+P RMA RILGMGDV+S VE+AQE +E+A+ +QKKI
Sbjct: 265 VTKPIKFIGTGEKMEALDVFHPSRMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP+E
Sbjct: 325 NKFDFNDFYNQIQQIKKMGNLKDLAAMIPGVGKAI-RDVDIDDNAFKGIEAIIQSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 359
R PE+L S RR+R+A+ SG Q+V++LV Q Q R MK + G G + + N+
Sbjct: 384 RTNPEVLNNS--RRQRIAKGSGTNIQEVNRLVKQFEQTRKMMKMVTGSKMAGMMGKMKNM 441
>gi|429749336|ref|ZP_19282465.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
332 str. F0381]
gi|429168518|gb|EKY10348.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
332 str. F0381]
Length = 442
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 172/335 (51%), Positives = 236/335 (70%), Gaps = 5/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSC-MLVAGDVYRPAAI 59
MGG+ + + + PTVIL++GLQG GKTT S KLANYLK + +LVA DVYRPAAI
Sbjct: 86 MGGDAAGVNLS-GNPTVILMSGLQGSGKTTFSGKLANYLKNKKNKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL I+G+QVGVPV++ P IA +G++ AK +++VVIVDTAGRL +D+ MM+E+
Sbjct: 145 DQLHIVGDQVGVPVFSDKGNNNPVDIALKGVQYAKDNHLNVVIVDTAGRLAVDEQMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++ + + P E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAA+++K V
Sbjct: 205 SNIHQAIKPHETLFVVDAMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAAITIKSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+ME ++ FYPDRMA RILGMGDV+S VE+AQE +E A ++QKKI
Sbjct: 265 VNKPIKFVGTGEKMEAIDVFYPDRMADRILGMGDVVSLVERAQEQFDEEQARKLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFL+Q + + RMGSM ++GM+PG+GK + + + K +EA+I +MTP+E
Sbjct: 325 NQFGFDDFLEQIQQIKRMGSMKDLLGMLPGVGKAVK-DLDIKDDAFKHIEAIIHSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
R P ++ S R+KR+A+ SG+ Q+V+QL+ Q
Sbjct: 384 RSNPAIIDMS--RKKRIAKGSGRELQEVNQLMKQF 416
>gi|336395268|ref|ZP_08576667.1| signal recognition particle protein [Lactobacillus farciminis KCTC
3681]
Length = 478
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 170/362 (46%), Positives = 248/362 (68%), Gaps = 10/362 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L A PT+I++ GLQG GKTT + KLAN LK K+ +AGDVYRPAAI
Sbjct: 87 MGQEAVPLNKAPHIPTIIMMVGLQGAGKTTTAGKLANRLKTNDKARPFFIAGDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ VPVY GT+ P +I K GL AK+ D VI+DTAGRL+ID+ +M+EL
Sbjct: 147 EQLKTIGQQLDVPVYDEGTDHDPVEIVKNGLAVAKENKNDYVIIDTAGRLEIDEQLMEEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K + +P E+L V D+MTGQ AA + F+ ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 QKIKDLAHPNEILFVADSMTGQVAAKVAHGFDEQLDITGVVLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK +G+GE+++ L+ F+PDRMA RILGMGD+L+ +EKAQ +E A+++ +KI
Sbjct: 267 TGKPIKFIGQGEKLDQLDVFHPDRMANRILGMGDMLTLIEKAQTDYNEEQAKQVAEKIRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
+FDFNDF+ Q + +MG + ++ MIPGM P A + EK + ++A++ +MTP
Sbjct: 327 NSFDFNDFIDQMDQIQKMGPLDELMKMIPGMAN-NPALANINIGEKDIAHLKAIVYSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
+ERE P+LL +P RR+R+A SG++ Q V++++ Q Q R ++M M G++ +
Sbjct: 386 KEREDPDLL--NPSRRRRIAAGSGQSVQNVNRMIKQFKQSR----DMMNKMSKGNMAGME 439
Query: 358 NL 359
L
Sbjct: 440 QL 441
>gi|379705243|ref|YP_005203702.1| signal recognition particle protein [Streptococcus infantarius
subsp. infantarius CJ18]
gi|374681942|gb|AEZ62231.1| signal recognition particle protein [Streptococcus infantarius
subsp. infantarius CJ18]
Length = 519
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 241/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +EL + PT+I++ GLQG GKTT + KLAN L K++ M++A D+YRPAAI
Sbjct: 87 LGSETAELEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPMMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG Q+ VPV+ GT+ +I GL +AK+ + D VI+DTAGRLQID+A+M EL
Sbjct: 147 DQLKTLGSQINVPVFDMGTDHSAVEIVTNGLAQAKENHNDYVIIDTAGRLQIDEALMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E+
Sbjct: 207 RDVKALAKPNEILLVVDSMIGQEAANVADEFNKQLDITGVVLTKIDGDTRGGAALSIREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKRSMELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF++Q V MG M +I MIPGM PA + EK++ A++ +MTP
Sbjct: 327 NTFDFNDFIEQLDQVQNMGPMEDLIKMIPGMAN-NPALKNFKVDEKAVARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG + V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIAAGSGNSFVDVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|422846642|ref|ZP_16893325.1| signal recognition particle protein [Streptococcus sanguinis SK72]
gi|325687450|gb|EGD29471.1| signal recognition particle protein [Streptococcus sanguinis SK72]
Length = 524
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 169/353 (47%), Positives = 243/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + ++++ + PT+I++ GLQG GKTT + KL N LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTADIIKSPKIPTIIMMVGLQGAGKTTFAGKLTNKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 SDVKALANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 386 AERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|83814688|ref|YP_445750.1| signal recognition particle protein [Salinibacter ruber DSM 13855]
gi|83756082|gb|ABC44195.1| signal recognition particle protein [Salinibacter ruber DSM 13855]
Length = 461
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 174/368 (47%), Positives = 250/368 (67%), Gaps = 9/368 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GGE + A++ PTVIL+AGLQG GKTT AKLA + +K+G + +L A DVYRPAA+D
Sbjct: 86 LGGEHEGIEMAETPPTVILVAGLQGSGKTTFCAKLARHFRKEGHAPLLAASDVYRPAAVD 145
Query: 61 QLVILGEQVGVPVYTA---GTEVKPS-QIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMM 116
QL L +QV PVY+ G V+ + ++A + + EA+ D+VI+DTAGR+ ID+AMM
Sbjct: 146 QLKTLADQVNAPVYSIEDDGEIVEDAVRVANEAVTEAQNTARDIVIIDTAGRMHIDEAMM 205
Query: 117 DELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSV 176
E++D+K + P E L VVD+MTGQ+A FN I G +L+KLDGD+RGGAALS+
Sbjct: 206 QEVEDIKTTVAPNETLFVVDSMTGQDAVNTAKEFNERIDYDGVVLSKLDGDTRGGAALSI 265
Query: 177 KEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKK 236
+ V KPIK GE+++ L PFYPDRMA RILGMGDV+SFVE+AQE +++AE +Q+K
Sbjct: 266 RTVVNKPIKFASTGEKLDALTPFYPDRMAQRILGMGDVVSFVERAQEQYDEQEAERLQEK 325
Query: 237 IMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIEAM 295
I S FD DF Q + + +MGS+ ++GMIPG+G KI+ + E++ +EA+I++M
Sbjct: 326 IRSEEFDLQDFYDQLQRIQKMGSIKELMGMIPGVGNKISDLDID--EEAFTHIEAIIQSM 383
Query: 296 TPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPA 355
TPEER P++L + RR+R+A+ SG + V+QLV+Q +M+ MK + + G
Sbjct: 384 TPEERAHPDIL--NGTRRRRIARGSGNEVRDVNQLVSQFEEMKDMMKTMQKMTSKGQDVD 441
Query: 356 LSNLEDAL 363
+S+L D +
Sbjct: 442 ISSLMDKI 449
>gi|340622252|ref|YP_004740704.1| hypothetical protein Ccan_14810 [Capnocytophaga canimorsus Cc5]
gi|339902518|gb|AEK23597.1| Fifty-four-like protein [Capnocytophaga canimorsus Cc5]
Length = 446
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 168/335 (50%), Positives = 234/335 (69%), Gaps = 5/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG+ + + + P++IL++GLQG GKTT S KLAN+LK K+ K +LVA DVYRPAAI
Sbjct: 86 MGGDAAGVNLS-GNPSIILMSGLQGSGKTTFSGKLANFLKNKKHKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL I+GEQ+G+ V++ P IA + L+ AK +V+IVDTAGRL +D+ MMDE+
Sbjct: 145 DQLHIVGEQIGIEVFSDRGNNNPVDIALKALQHAKSNGFNVMIVDTAGRLAVDQQMMDEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++ + LNP E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAA+S+K V
Sbjct: 205 SNIHKALNPQETLFVVDAMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAAISIKSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+M+ ++ FYP+RMA RILGMGDV+S VE+AQE +E A ++QKKI
Sbjct: 265 VNKPIKFIGTGEKMDAIDVFYPERMADRILGMGDVISLVERAQEQFDEEQARKLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFL Q + + +MGSM ++GM+PG+GK + ++ + K +EA+I +MTP E
Sbjct: 325 NQFGFDDFLAQIQQIKKMGSMKDLLGMLPGVGKAVK-DLDISDDAFKHIEAIIYSMTPSE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
R P L+ S R++R+A+ SG+ Q+V+QL+ Q
Sbjct: 384 RSNPALIDAS--RKRRIAKGSGRDVQEVNQLLKQF 416
>gi|416124362|ref|ZP_11595358.1| signal recognition particle protein [Staphylococcus epidermidis
FRI909]
gi|418615160|ref|ZP_13178109.1| signal recognition particle protein [Staphylococcus epidermidis
VCU118]
gi|420199023|ref|ZP_14704707.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM031]
gi|319401472|gb|EFV89682.1| signal recognition particle protein [Staphylococcus epidermidis
FRI909]
gi|374818234|gb|EHR82402.1| signal recognition particle protein [Staphylococcus epidermidis
VCU118]
gi|394272709|gb|EJE17159.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM031]
Length = 455
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 165/346 (47%), Positives = 250/346 (72%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + A PTV+++ GLQG GKTT + KLA + KK K +LVAGD+YRPAAI
Sbjct: 87 MGGENTSIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPLLVAGDIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ +PVY+ G +V P QI + L+ AK++++D VI+DTAGRL ID+ +M+EL
Sbjct: 147 DQLQTVGKQIDIPVYSEGDQVPPQQIVENALKHAKEEHLDFVIIDTAGRLHIDETLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++VK + P E++LVVDAMTGQ+A + +F+ ++ ++G LTKLDGD+RGGAALS++ V
Sbjct: 207 QEVKEISKPDEIMLVVDAMTGQDAVNVAQSFDEQLDVSGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL+Q V +G + ++ MIPGM K+ ++ ++K + ++A+I++MTP+
Sbjct: 327 SSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER PE L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERSNPETLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|406670909|ref|ZP_11078154.1| signal recognition particle protein [Facklamia hominis CCUG 36813]
gi|405582425|gb|EKB56431.1| signal recognition particle protein [Facklamia hominis CCUG 36813]
Length = 486
Score = 334 bits (857), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 167/353 (47%), Positives = 244/353 (69%), Gaps = 4/353 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQG-KSCMLVAGDVYRPAAI 59
MGG+ L + PTVI++ GLQG GKTT KLA Y++ QG K +LVAGDVYRPAAI
Sbjct: 87 MGGDHVPLNISTQPPTVIMMVGLQGAGKTTTVGKLAKYIQGQGLKKPLLVAGDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ + V++ GTE P IAK L +AK + D VI+DTAGRL +++ +M+EL
Sbjct: 147 DQLQTIGQQLNLEVFSQGTEANPVDIAKNALAKAKIQGNDAVIIDTAGRLHVNQELMEEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+++K + P ++LL +DAMTGQ+A + FN ++ ITG ++TKLDGD+RGGAALS++ +
Sbjct: 207 QNIKAAVQPHDILLTIDAMTGQDAVNVAKAFNDDLDITGIVITKLDGDTRGGAALSIRSI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK G+GE+++ LE FYPDRMAGRILGMGD+++ +EKAQ+ +E+A +M K+
Sbjct: 267 INKPIKFTGQGEQLDALELFYPDRMAGRILGMGDMMTLIEKAQQDFDEEEAAKMADKLKD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA-EKSLKIMEAMIEAMTPE 298
A+FDFNDF+ Q V +MG + ++ +IPGM KI + +KS+ + A++++MTP
Sbjct: 327 ASFDFNDFINQMDQVRKMGPIKDLMKLIPGMSKIPGLDDFDIDDKSMNRIRAVVQSMTPY 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 351
ERE P+++++S RRKR+A G+ ++QL+ Q Q R MK + GG
Sbjct: 387 ERENPDVISQS--RRKRIAAGCGQPLNDINQLIKQFNQSREMMKQMSNGRMGG 437
>gi|423317353|ref|ZP_17295258.1| signal recognition particle protein [Bergeyella zoohelcum ATCC
43767]
gi|405581486|gb|EKB55515.1| signal recognition particle protein [Bergeyella zoohelcum ATCC
43767]
Length = 455
Score = 334 bits (857), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 171/335 (51%), Positives = 234/335 (69%), Gaps = 5/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG E + +P+VIL+AGLQG GKTT S KLA++LK K+ K +LVA DVYRPAAI
Sbjct: 86 MGG-TQEGINLSGKPSVILIAGLQGSGKTTFSGKLAHFLKTKKNKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +LGEQ+ VPVYT PS IA+ + AK + DVVIVDTAGRL +D+ MM+E+
Sbjct: 145 EQLKVLGEQIQVPVYTEEGSNNPSTIAENAVNYAKHNSFDVVIVDTAGRLAVDEQMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K V ++P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL+++ V
Sbjct: 205 KTVHHFIHPNETLFVVDSMTGQDAVNTAKAFNDALNFDGVVLTKLDGDTRGGAALTIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK + GE+ME L+ FYP+RMA RILGMGDV+S VE+AQE +E+A+++ KKI
Sbjct: 265 VEKPIKFISTGEKMEALDLFYPERMADRILGMGDVISLVERAQEQFDEEEAKKLHKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFL+Q + + RMG+M ++GMIPG+GK V + + K +EA+I++MTPEE
Sbjct: 325 NEFGFDDFLQQIQQIKRMGNMKDLMGMIPGVGKAI-KDVDINDDAFKHIEAIIQSMTPEE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
R KP ++ + R+ R+A+ SG+ + V+QL+ Q
Sbjct: 384 RRKPSII--NTQRKNRIAKGSGRKIEDVNQLMKQF 416
>gi|290580502|ref|YP_003484894.1| signal recognition particle protein subunit [Streptococcus mutans
NN2025]
gi|449875574|ref|ZP_21782275.1| signal recognition particle protein [Streptococcus mutans S1B]
gi|254997401|dbj|BAH88002.1| signal recognition particle protein subunit [Streptococcus mutans
NN2025]
gi|449253736|gb|EMC51678.1| signal recognition particle protein [Streptococcus mutans S1B]
Length = 516
Score = 334 bits (857), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 168/353 (47%), Positives = 242/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GT+ +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTDHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
+FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|399024821|ref|ZP_10726848.1| signal recognition particle protein [Chryseobacterium sp. CF314]
gi|398079628|gb|EJL70474.1| signal recognition particle protein [Chryseobacterium sp. CF314]
Length = 453
Score = 334 bits (857), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 172/335 (51%), Positives = 234/335 (69%), Gaps = 5/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG E + +P+VIL+AGLQG GKTT S KLANYLK K+ K +LVA DVYRPAAI
Sbjct: 86 MGGS-QEGISLSGKPSVILIAGLQGSGKTTFSGKLANYLKTKRNKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +LG Q+GVPV+T PS IA+ + AK+ N DVVIVDTAGRL ID+ MM+E+
Sbjct: 145 DQLKVLGGQIGVPVFTEEGSTNPSTIAENAINFAKQNNHDVVIVDTAGRLAIDEQMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K V + P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL+++ V
Sbjct: 205 KSVHYFIKPDETLFVVDSMTGQDAVNTAKAFNEALNFDGVVLTKLDGDTRGGAALTIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK + GE+ME L+ FYP+RMA RILGMGDV+S VE+AQE +E+A+++ KKI
Sbjct: 265 VEKPIKFISTGEKMEALDLFYPERMADRILGMGDVVSLVERAQEQFDEEEAKKLHKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFLKQ + +MG+M ++GMIPG+GK V ++ + K +EA+I +MTP+E
Sbjct: 325 NEFGFDDFLKQINQIKKMGNMKDLMGMIPGVGKAI-KDVEISDDAFKHIEAIIYSMTPDE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
R +P ++ + R++R+A+ +G+ + V+QL+ Q
Sbjct: 384 RRRPSII--NTQRKQRIARGAGRKIEDVNQLMKQF 416
>gi|357636864|ref|ZP_09134739.1| signal recognition particle protein [Streptococcus macacae NCTC
11558]
gi|357585318|gb|EHJ52521.1| signal recognition particle protein [Streptococcus macacae NCTC
11558]
Length = 517
Score = 334 bits (857), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 168/353 (47%), Positives = 239/353 (67%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E++ + PT+I++ GLQG GKTT + KLA+ L K + ML+A D+YRPAAI
Sbjct: 87 LGSETAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLAHKLIKDENARPMLIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LGEQ+ VPV+ GTE +I QGL +A++ + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGEQINVPVFDMGTEHSAVEIVSQGLAQARENHNDYVLIDTAGRLQIDEKLMAEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+++
Sbjct: 207 RDVKALAQPNEILLVVDSMIGQEAANVAYEFNKQLDITGVVLTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G+PIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ E+ +K+
Sbjct: 267 TGRPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKTAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM P A ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFVDQLDQVQNMGPMEDILKMIPGMAN-NPALANIKVDEQEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE PELL +P RR+R+A SG T V++ + Q + M+ G M G
Sbjct: 386 EERENPELL--NPSRRRRIASGSGNTFVNVNKFIKDFNQAKQMMQ---GAMSG 433
>gi|160892788|ref|ZP_02073578.1| hypothetical protein CLOL250_00319 [Clostridium sp. L2-50]
gi|156865829|gb|EDO59260.1| signal recognition particle protein [Clostridium sp. L2-50]
Length = 448
Score = 334 bits (857), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 177/351 (50%), Positives = 241/351 (68%), Gaps = 4/351 (1%)
Query: 1 MGGEVSEL-VFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAI 59
MG +V+EL + + TVI++ GLQG GKTT +AKLA K +GK +LVA DVYRPAAI
Sbjct: 87 MGSDVTELKLLPSNEITVIMMCGLQGAGKTTTAAKLAYQFKNKGKKPLLVACDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL I GE+VGVPV+T G KP IAK + A+K ++++V +DTAGRL +D+ MMDEL
Sbjct: 147 KQLQINGEKVGVPVFTMGDNHKPLDIAKAAILHAEKNHMNLVFIDTAGRLHVDEDMMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++K +N T +L VDAMTGQ+A + TTFN +IGI G ILTKLDGD+RGGAALS+K V
Sbjct: 207 AEIKENINVTYTVLTVDAMTGQDAVNVATTFNDKIGIDGVILTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPI G GE++ DLEPFYP RMA RILGMGDV S +EKAQ + E A+EM++K
Sbjct: 267 TGKPILYAGMGEKLTDLEPFYPSRMASRILGMGDVESLIEKAQNAIDDEKAKEMEQKFRK 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
A+FDFNDF++Q + +MG + ++ M+PGM V+ E + K +A+I++MTP E
Sbjct: 327 ASFDFNDFMEQMDQLEKMGGIGDLLSMMPGMSS-QMKNVQIDEDAGKKPKAIIQSMTPNE 385
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
R + + SP R+KR+A +G +V++ + Q Q + MK + G+M G
Sbjct: 386 RCLKDPI--SPSRKKRIADGAGVQIAEVNRFLKQFEQSKKMMKQMSGMMGG 434
>gi|118443987|ref|YP_878286.1| signal recognition particle protein [Clostridium novyi NT]
gi|118134443|gb|ABK61487.1| signal recognition particle protein [Clostridium novyi NT]
Length = 451
Score = 334 bits (857), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 173/333 (51%), Positives = 241/333 (72%), Gaps = 2/333 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S++ F+ TVI+L GLQG GKTT++ KLA L+K K +LVA D+YRPAAI
Sbjct: 87 MGSTESKIEFSNKGLTVIMLVGLQGAGKTTMAGKLALQLRKNNKKPLLVACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G+Q+ VPV++ G +V P IAK +E AK N +VVI+DTAGRL ID+A+M+EL+
Sbjct: 147 QLQVVGKQIDVPVFSMGDKVSPVDIAKASIEHAKNNNNNVVIIDTAGRLHIDEALMEELE 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + P E+LLVVD+MTGQ+A + TFN ++ ITG ILTKLDGD+RGGAALS+K V+
Sbjct: 207 NIKGSVEPNEILLVVDSMTGQDAVNVSETFNNKLDITGVILTKLDGDTRGGAALSIKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GE+M DLE F+PDRMA RILGMGDVLS +EKAQE + +E A+E+ K+++
Sbjct: 267 GKPIKYVGLGEKMNDLEVFHPDRMASRILGMGDVLSLIEKAQEAIDEEKAKELGDKMLNL 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPE 298
F+ DF + +MG ++++I MIPG+ ++ + EK +K +EAMI++MT +
Sbjct: 327 EFNLEDFKDSMAQMKKMGPLTKIIEMIPGVNSKQLQGLDLSRGEKEIKKIEAMIDSMTLK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 331
ER P L+A SP R++R+A SG QQV++L+
Sbjct: 387 ERRDPNLVASSPSRKRRIANGSGCNVQQVNKLL 419
>gi|373462521|ref|ZP_09554240.1| signal recognition particle protein [Prevotella maculosa OT 289]
gi|371948085|gb|EHO65975.1| signal recognition particle protein [Prevotella maculosa OT 289]
Length = 449
Score = 334 bits (857), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 183/377 (48%), Positives = 247/377 (65%), Gaps = 14/377 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG+ +EL + RP VIL++GLQG GKTT S KLAN LK K+ + +LVA DVYRPAAI
Sbjct: 86 MGGDTAELKL-EGRPAVILMSGLQGSGKTTFSGKLANLLKNKKNRKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL ++GEQ+GVPVY+ IA+ + EAK K DVVIVDTAGRL +D+ MM E+
Sbjct: 145 AQLKVVGEQIGVPVYSEPDSKDVVAIAEGAVREAKAKGYDVVIVDTAGRLAVDEEMMIEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++K L+P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 SNLKNSLHPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+ME ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VTKPIKFVGTGEKMEAIDVFHPARMADRILGMGDIVSLVERAQEQFDEEEAKRLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK V + + K +EA+I++MTP+E
Sbjct: 325 NKFDFNDFLGQIEQIKKMGNLKDLASMIPGVGKAIK-DVDIDDNAFKGIEAIIKSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 359
R PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G G + + +
Sbjct: 384 RTSPEILNTS--RRQRIAKGSGTNIQEVNKLIKQFDQTRKMMKTITGNQMAGMMSRMKGM 441
Query: 360 EDALKSEQKAPPGTARR 376
PG A+R
Sbjct: 442 N---------IPGMAKR 449
>gi|390953363|ref|YP_006417121.1| signal recognition particle subunit FFH/SRP54 (srp54) [Aequorivita
sublithincola DSM 14238]
gi|390419349|gb|AFL80106.1| signal recognition particle subunit FFH/SRP54 (srp54) [Aequorivita
sublithincola DSM 14238]
Length = 442
Score = 334 bits (857), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 173/335 (51%), Positives = 234/335 (69%), Gaps = 5/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE + + + + P+VIL++GLQG GKTT S KLANYLK K+ K +LVA D+YRPAAI
Sbjct: 86 MGGETAGINLSGT-PSVILMSGLQGSGKTTFSGKLANYLKTKKSKKPLLVACDIYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL ++G+Q+GV VY+ P IA+ + AK+ +VVIVDTAGRL ID+AMM E+
Sbjct: 145 NQLHVVGDQIGVEVYSEPENKNPVAIAQNAIAHAKQNGFNVVIVDTAGRLAIDEAMMAEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DV + +NP E L VVDAMTGQ+A FN ++ G +LTKLDGD+RGGAA+S+K V
Sbjct: 205 ADVHKAINPQETLFVVDAMTGQDAVNTAKAFNEKLNFDGVVLTKLDGDTRGGAAISIKSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+M+ ++ F+P RMA RILGMGDV+S VE+AQE +E+A ++QKKI
Sbjct: 265 VDKPIKFIGTGEKMDAIDVFHPARMADRILGMGDVVSLVERAQEQFDEEEARKIQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFL Q + V +MGSM ++GMIPG GK V + + K +EA+I +MTP E
Sbjct: 325 NQFGFDDFLSQIQQVKKMGSMKDLVGMIPGAGKALK-DVDIDDDAFKGIEAIIHSMTPTE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
R +P ++ S R+KR+A SG + QQV+QL+ Q
Sbjct: 384 RAQPAVIDGS--RKKRIASGSGTSVQQVNQLLKQF 416
>gi|385809358|ref|YP_005845754.1| Signal recognition particle subunit SRP54 [Ignavibacterium album
JCM 16511]
gi|383801406|gb|AFH48486.1| Signal recognition particle subunit SRP54 [Ignavibacterium album
JCM 16511]
Length = 441
Score = 334 bits (857), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 174/348 (50%), Positives = 249/348 (71%), Gaps = 9/348 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG SE+ + T+IL+ GLQG GKTT SAKLA LK++ + +LVA D+YRPAAI+
Sbjct: 86 LGGGHSEIFLNPTGATIILVVGLQGSGKTTFSAKLAKRLKERKRKVLLVAADIYRPAAIE 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQ-IAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL ILG+QV VPV++ E K ++ +A + L+ K+K D +I+DTAGRL +D+ MM E+
Sbjct: 146 QLKILGQQVDVPVFS--LEQKDARLVASESLKYVKEKGFDTLIIDTAGRLHVDEEMMKEV 203
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
D+K ++ PTE L VVD+MTGQ+A FN + G +L+KLDGD+RGGAA+S++ V
Sbjct: 204 ADIKEIVKPTETLFVVDSMTGQDAVNSAKAFNETVNFDGIVLSKLDGDARGGAAISIRSV 263
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
GKPIK V GE++E+L+ FYPDR+A RILG GD++S VEKAQE + + +A++M++K+
Sbjct: 264 VGKPIKFVSNGEKLENLDVFYPDRLASRILGKGDIVSLVEKAQETIDEFEAKKMEEKLRK 323
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIEAMTPE 298
FDF DFLKQ + + +MGS+S +IGMIPG+G +I AQ+ +K+L +EA+I +MT +
Sbjct: 324 NKFDFEDFLKQIKLIKKMGSLSSLIGMIPGLGSQIKNAQI--DDKALVKVEAIINSMTKQ 381
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
ERE P++L S RRKR+A+ SG T Q V++L+ Q FQ RM ++M
Sbjct: 382 ERENPKVLNGS--RRKRIARGSGTTIQDVNRLIKQ-FQEMQRMMSMMN 426
>gi|409122949|ref|ZP_11222344.1| signal recognition particle protein [Gillisia sp. CBA3202]
Length = 442
Score = 334 bits (857), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 170/335 (50%), Positives = 233/335 (69%), Gaps = 5/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGEV E+ + P+VIL++GLQG GKTT S KLAN+LK K+ K+ +LVA D+YRPAAI
Sbjct: 86 MGGEVEEIDLS-GNPSVILMSGLQGSGKTTFSGKLANFLKTKKNKNPLLVACDIYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL I+GEQ+GV V++ P I+K + AK+ +VVI+DTAGRL +D+AMM E+
Sbjct: 145 NQLQIVGEQIGVEVFSDVGNQDPVAISKAAIAHAKQNGFNVVIIDTAGRLAVDEAMMTEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++ + P E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAA+S+K V
Sbjct: 205 ANIHTAIKPEETLFVVDSMTGQDAVNTAKAFNDRLNFDGVILTKLDGDTRGGAAISIKSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+M+ ++ FYP RMA RILGMGDV+S VE+AQE +E+A ++QKKI
Sbjct: 265 VNKPIKFIGTGEKMDAIDVFYPSRMADRILGMGDVVSLVERAQEQYDEEEARKLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFLKQ + +MGSM ++GMIPG GK+ + + + K +EA+I +MTP E
Sbjct: 325 NQFGFDDFLKQLHQIKKMGSMKDLLGMIPGAGKMLK-DIDIDDDAFKHVEAIIYSMTPAE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
R P ++ + VR+KR+A SG + QQV+QL+ Q
Sbjct: 384 RSTPTII--NAVRKKRIAGGSGTSVQQVNQLLKQF 416
>gi|217964047|ref|YP_002349725.1| signal recognition particle protein [Listeria monocytogenes HCC23]
gi|386008573|ref|YP_005926851.1| signal recognition particle protein [Listeria monocytogenes L99]
gi|386027180|ref|YP_005947956.1| signal recognition particle subunit SRP54 [Listeria monocytogenes
M7]
gi|217333317|gb|ACK39111.1| signal recognition particle protein [Listeria monocytogenes HCC23]
gi|307571383|emb|CAR84562.1| signal recognition particle protein [Listeria monocytogenes L99]
gi|336023761|gb|AEH92898.1| signal recognition particle, subunit SRP54 [Listeria monocytogenes
M7]
Length = 450
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 171/346 (49%), Positives = 246/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI
Sbjct: 87 MGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV+ G +V P +IAKQ + +AK++++D VI+DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFFLGDQVSPVEIAKQAIAKAKEEHLDYVIIDTAGRLHIDETLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K VK + PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KQVKEIATPTEILLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK + GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + E + M++K+
Sbjct: 267 TGKPIKFIATGEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDAEKMKAMEQKMKD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
+ +DFL Q + V +MG + ++ M+PG K+ + +K L +EA+I++MT
Sbjct: 327 NSMTLDDFLDQLQQVKQMGPLDELLKMMPGANKMKGLDNMNVDDKQLGHIEAIIKSMTKN 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E++ P+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 387 EKDNPDIINAS--RRKRIARGSGRPVQEINRLLKQFAEMKKMMKQM 430
>gi|282850847|ref|ZP_06260221.1| signal recognition particle protein [Lactobacillus gasseri 224-1]
gi|282557799|gb|EFB63387.1| signal recognition particle protein [Lactobacillus gasseri 224-1]
Length = 440
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 175/362 (48%), Positives = 247/362 (68%), Gaps = 11/362 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L ++ PT+I++ GLQG GKTT KLANYL K K+ +L+AGD+YRPAAI
Sbjct: 51 MGEEAVSLNKSQHIPTIIMMVGLQGTGKTTTVGKLANYLMKNEKARPLLIAGDIYRPAAI 110
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ VPVY+ + ++I K GLEEA K D V++DTAGRL+ID+ +MDEL
Sbjct: 111 DQLKQIGQQLNVPVYSEDNQ-DVAEIVKHGLEEADKNKNDYVLIDTAGRLEIDEQLMDEL 169
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K V V +P LLVVDAMTGQ A + FN ++ +TG ILTKLDGD+RGGAALS++ V
Sbjct: 170 KRVTAVAHPDNTLLVVDAMTGQAATQVAEGFNNDLDLTGIILTKLDGDTRGGAALSIRAV 229
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PI G+GE++ DL F+PDRMA RILGMGD+L+ +EKAQ+ ++AE+M +K+
Sbjct: 230 TGLPIIFTGQGEKLTDLSTFHPDRMASRILGMGDMLTLIEKAQQDYDAKEAEKMAEKMRE 289
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V +MG + ++I MIPG+G PA ++ EK + ++A++ +MTP
Sbjct: 290 NTFDFNDFIDQMDQVQKMGPLDQIIKMIPGLGN-NPALKNIQIPEKQISHIKAIVYSMTP 348
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
EERE P++L +P RR+R+A SG++ +V++++ Q Q K +M M G + +
Sbjct: 349 EERENPDIL--NPSRRRRIAAGSGRSIAEVNRMIKQFKQ----SKEMMQKMTKGDMGEFA 402
Query: 358 NL 359
NL
Sbjct: 403 NL 404
>gi|306820620|ref|ZP_07454249.1| signal recognition particle protein [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551351|gb|EFM39313.1| signal recognition particle protein [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 443
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 172/354 (48%), Positives = 242/354 (68%), Gaps = 9/354 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S++ + PTVIL++GLQG GKTT + KLA +LK QGK+ MLVA DVYRPAAI
Sbjct: 87 MGSVQSKINISSKPPTVILMSGLQGAGKTTTTGKLAYHLKSQGKNPMLVACDVYRPAAIT 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL IL ++VG Y+ P IA+ +E AK DVVI+DTAGRL ID+ +M ELK
Sbjct: 147 QLQILSDKVGAKFYSEEGNKNPVTIAQNAVESAKTLGFDVVIIDTAGRLHIDEELMQELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + P+E+LLVVDAMTGQ+ +V +F+ +GI G IL+KLDGD+RGGAALS++ V+
Sbjct: 207 NIKSTVRPSEILLVVDAMTGQDTVNIVKSFDEALGIDGVILSKLDGDTRGGAALSIRAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK GE++ DLEPFYPDR+A RILGMGDV+S +EKAQ + ++ +E++ KI +
Sbjct: 267 NKPIKFAAIGEKINDLEPFYPDRIASRILGMGDVMSLIEKAQNAVDEQSMKELENKIRNR 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA---EKSLKIMEAMIEAMTP 297
+F+F DFLKQ + + +MG + +I MIPG+ P Q++ A +K L +EA+I++MT
Sbjct: 327 DFNFEDFLKQMQQIKKMGPLKNIIEMIPGV----PKQLKNADIDDKELLKIEAIIQSMTK 382
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 351
+ER P ++ S R+ R+A+ SG QV++L+ Q + R MK + + GG
Sbjct: 383 QERLDPSIINGS--RKIRIAKGSGTQVSQVNKLLKQFEETRKMMKQMTNIKMGG 434
>gi|374337948|ref|YP_005094657.1| Signal recognition particle subunit Ffh SRP54 [Streptococcus
macedonicus ACA-DC 198]
gi|372284057|emb|CCF02297.1| Signal recognition particle, subunit Ffh SRP54 [Streptococcus
macedonicus ACA-DC 198]
Length = 521
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 169/353 (47%), Positives = 241/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +EL + PT+I++ GLQG GKTT + KLAN L K + +++A D+YRPAAI
Sbjct: 87 LGSETAELEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKDENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG Q+ VPV+ GT+ +I GL +AK+ + D VI+DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGSQINVPVFDMGTDHSAVEIVTNGLAQAKENHNDYVIIDTAGRLQIDEKLMEEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + NP E+LLVVD+M GQEAA + FN ++ +TG +LTK+DGD+RGGAALS++E+
Sbjct: 207 RDVKALANPNEILLVVDSMIGQEAANVADEFNKQLDVTGVVLTKIDGDTRGGAALSIREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA + EK++ A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALKNFKVDEKAVARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE PELL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 386 EERENPELL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|429738313|ref|ZP_19272125.1| signal recognition particle protein [Prevotella saccharolytica
F0055]
gi|429160509|gb|EKY02970.1| signal recognition particle protein [Prevotella saccharolytica
F0055]
Length = 450
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 179/347 (51%), Positives = 236/347 (68%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG+ L KS+P +IL+AGLQG GKTT S KLAN LK KQ K +LVA DVYRPAAI
Sbjct: 86 MGGDSVGLQL-KSKPAIILMAGLQGSGKTTFSGKLANLLKNKQNKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL ++ Q+GVPVY T +IA ++EAK K DV+++DTAGRL ID+ MMDE+
Sbjct: 145 EQLRVIAAQIGVPVYAEETNKNVIEIAGNAIKEAKAKGCDVILIDTAGRLAIDEQMMDEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K + P E L VVD+MTGQ+A FN + I G ILTKLDGD+RGGAALS++ V
Sbjct: 205 SRLKTFVQPDETLFVVDSMTGQDAVNTAREFNERLDIDGVILTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+ME L+ FYP RMA RILGMGD++S VE+AQE +E+A +QKKI
Sbjct: 265 VDKPIKFVGTGEKMEALDVFYPSRMADRILGMGDIVSLVERAQEQFDEEEARRLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL+Q + +MG++ + MIPG+GK + + K +EA+I++MTP+E
Sbjct: 325 NKFDFNDFLQQIEQIKKMGNLKDLASMIPGVGK-AIKDADIDDDAFKGVEAIIKSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R P++L S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 384 RTNPDILNNS--RRQRIAKGSGTNIQEVNKLIKQFDQTRKMMKMVTG 428
>gi|51892603|ref|YP_075294.1| signal recognition particle protein [Symbiobacterium thermophilum
IAM 14863]
gi|51856292|dbj|BAD40450.1| signal recognition particle [Symbiobacterium thermophilum IAM
14863]
Length = 454
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 185/350 (52%), Positives = 252/350 (72%), Gaps = 9/350 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGGE L A PT+I+L GLQG GKTT +AKLA LKK+GK +LVA DVYRPAAI
Sbjct: 86 MGGESVGLNMADRPPTIIMLCGLQGAGKTTHAAKLALKLKKEGKKPLLVAADVYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQVGVPVY+ G + P IA+ + A ++ DV+IVDTAGRL ID+ +M+EL+
Sbjct: 146 QLEVLGEQVGVPVYSEGDQASPVDIAQHAVAYAAEERRDVIIVDTAGRLTIDEELMEELQ 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P + LLV+DAM GQ+A F+ ++GI G ILTKLDGD+RGGAALSV+EV+
Sbjct: 206 QIKARIQPHDTLLVLDAMIGQDAVTTAEHFHTKLGIDGVILTKLDGDTRGGAALSVREVT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+PIK VG GE+++ LEPFYPDR+A RILGMGDVL+ +EKAQE + ++ AEEM +K++ A
Sbjct: 266 GRPIKFVGVGEKLDALEPFYPDRLASRILGMGDVLTLIEKAQEQVDRKQAEEMARKMLKA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA---EKSLKIMEAMIEAMTP 297
FDF DFL+Q R + RMG + ++ M+PG+G AQ+++ EK LK +EA+I +MTP
Sbjct: 326 QFDFEDFLEQLRALQRMGPLQDILKMLPGVG----AQLKDINIDEKELKHIEAIILSMTP 381
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
+ER P+++ + RR+R+A+ SG+ +V +L+ Q Q R MK L G+
Sbjct: 382 KERRNPDII--NVRRRERIARGSGRPIAEVHRLIKQFEQTRKLMKQLGGM 429
>gi|418414279|ref|ZP_12987494.1| signal recognition particle protein [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|410876886|gb|EKS24783.1| signal recognition particle protein [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 455
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 170/346 (49%), Positives = 246/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + A PTV+++ GLQG GKTT + KLA + KK K MLVAGD+YRPAAI
Sbjct: 87 MGGENTTIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAGDIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ VPVY+ G +VKP QI + L+ AK++++D VI+DTAGRL ID+A+M+EL
Sbjct: 147 DQLQTVGKQLDVPVYSEGDQVKPQQIVENALKHAKEEHLDFVIIDTAGRLHIDEALMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++VK + P EV+LVVDAMTGQ+ + +F+ ++ +TG LTKLDGD+RGGAALS++ V
Sbjct: 207 QEVKAISKPDEVMLVVDAMTGQDTVNVAQSFDEQLDVTGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+M+ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+
Sbjct: 267 TQKPIKFVGMSEKMDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT-PAQVREAEKSLKIMEAMIEAMTPE 298
++F DFL Q V +G + ++ MIPGM K+ ++ +K + ++A+I++MTP
Sbjct: 327 SSFTLEDFLDQLDQVKNLGPLDDIMKMIPGMNKMKGMNKLNMDDKQIDHIKAIIQSMTPM 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERANPATLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|171779410|ref|ZP_02920374.1| hypothetical protein STRINF_01255 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282027|gb|EDT47458.1| signal recognition particle protein [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
Length = 519
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 241/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +EL + PT+I++ GLQG GKTT + KLAN L K++ M++A D+YRPAAI
Sbjct: 87 LGSETAELEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPMMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG Q+ VPV+ GT+ +I GL +AK+ + D VI+DTAGRLQID+A+M EL
Sbjct: 147 DQLKTLGSQINVPVFDMGTDHSAVEIVTNGLAQAKENHNDYVIIDTAGRLQIDEALMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E+
Sbjct: 207 RDVKALAKPNEILLVVDSMIGQEAANVADEFNKQLDITGVVLTKIDGDTRGGAALSIREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKRSMELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF++Q V MG M +I MIPGM PA + EK++ A++ +MTP
Sbjct: 327 NTFDFNDFIEQLDQVQNMGPMEDLIKMIPGMAN-NPALKNFKVDEKAVARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG + V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIAAGSGNSFVDVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|170017639|ref|YP_001728558.1| Signal recognition particle protein [Leuconostoc citreum KM20]
gi|169804496|gb|ACA83114.1| Signal recognition particle protein [Leuconostoc citreum KM20]
Length = 491
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 179/362 (49%), Positives = 239/362 (66%), Gaps = 13/362 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MG E L + PTVI++AGLQG GKTT AKLA LK +Q +L+A DVYRPAAI
Sbjct: 87 MGEEAVPLNKSPKIPTVIMMAGLQGAGKTTTVAKLAYKLKSEQHARPLLIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ILG +G+PV+ GT++ P I +QGL EA K D V +DTAGRLQID+ +M EL
Sbjct: 147 DQLEILGRDLGIPVFQLGTDINPRDIVRQGLAEAHKNKNDYVFIDTAGRLQIDETLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
KD+ + +P E+LL VDAMTGQ AA F+ + +TG +LTKLD D+RGGAALS+++V
Sbjct: 207 KDIADIASPDEILLTVDAMTGQNAAETAKGFSAALDLTGVVLTKLDADTRGGAALSIRDV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK +G+GE+ DL+ FYPDRMA RILGMGDVL+ +EKAQ +E + +K+
Sbjct: 267 TGKPIKFIGQGEKPTDLDVFYPDRMASRILGMGDVLTLIEKAQRDFDEEAQAKQLEKMRQ 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q + V +MG M ++ MIPGM P A V K +EA++ +MTP
Sbjct: 327 NTFDFNDFVAQLKQVQKMGPMEDLLKMIPGMAN-NPALANVNIDAKQFSHLEAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-----NLMGV--MEG 350
ERE P+L+ +P RR+R+A +G+ +V++++ Q QMR M N G+ M G
Sbjct: 386 AERENPDLI--NPSRRRRLAAGAGRPIVEVNRMIKQFDQMRKMMNQATNGNFGGLDKMMG 443
Query: 351 GS 352
GS
Sbjct: 444 GS 445
>gi|399926872|ref|ZP_10784230.1| signal recognition particle protein [Myroides injenensis M09-0166]
Length = 445
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 170/335 (50%), Positives = 231/335 (68%), Gaps = 5/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE + + + P++IL++GLQG GKTT S KLAN+LK K+ K+ +LVA DVYRPAAI
Sbjct: 86 MGGEAAGINLS-GNPSIILMSGLQGSGKTTFSGKLANFLKTKKNKNVLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL ++GEQ+GV VY+ P QIA+ ++ AK +VVIVDTAGRL +D+ MM E+
Sbjct: 145 NQLHVVGEQLGVEVYSEEGNNNPVQIAENAIKHAKSNGFNVVIVDTAGRLAVDEEMMTEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++ + P E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAA+S+K V
Sbjct: 205 ANIHNAIKPHETLFVVDSMTGQDAVNTAKAFNDRLNFDGVILTKLDGDTRGGAAISIKSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+M+ ++ FYP+RMA RILGMGDV+S VE+AQ +E+A ++QKKI
Sbjct: 265 VNKPIKFIGTGEKMDAIDIFYPERMADRILGMGDVISLVERAQAQYDEEEARKIQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFL Q + V +MGSM ++GMIPG+GK V + + K +EA+I +MTP E
Sbjct: 325 NEFGFDDFLSQIQQVKKMGSMKDLVGMIPGVGK-ALKDVEIEDDAFKHIEAIIHSMTPAE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
R KP LL R++R+A+ SG QQV+QL+ Q
Sbjct: 384 RSKPSLL--DAKRKQRIAKGSGTDIQQVNQLLKQF 416
>gi|320546729|ref|ZP_08041040.1| signal recognition particle protein [Streptococcus equinus ATCC
9812]
gi|320448608|gb|EFW89340.1| signal recognition particle protein [Streptococcus equinus ATCC
9812]
Length = 521
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 242/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G E +EL + PT+I++ GLQG GKTT + KLAN L K+ K+ M++A D+YRPAAI
Sbjct: 87 LGSETAELEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEEKARPMMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG Q+ VPV+ GT+ +I GL +AK+ + D VI+DTAGRLQID+A+M EL
Sbjct: 147 DQLKTLGSQINVPVFDMGTDHSAVEIVTHGLAQAKENHNDYVIIDTAGRLQIDEALMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E+
Sbjct: 207 RDVKALAKPNEILLVVDSMIGQEAANVADEFNKQLDITGIVLTKIDGDTRGGAALSIREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKRSMELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF++Q V MG M ++ MIPGM PA + EK++ A++ +MTP
Sbjct: 327 NTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAN-NPALKNFKVDEKAVARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG + V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIAAGSGNSFVDVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|450165643|ref|ZP_21881945.1| signal recognition particle protein [Streptococcus mutans B]
gi|449240476|gb|EMC39151.1| signal recognition particle protein [Streptococcus mutans B]
Length = 516
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 168/353 (47%), Positives = 242/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
+FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T V++ + Q + K + GV+ G
Sbjct: 386 EERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVISG 433
>gi|293374741|ref|ZP_06621049.1| signal recognition particle protein [Turicibacter sanguinis PC909]
gi|325837601|ref|ZP_08166448.1| signal recognition particle protein [Turicibacter sp. HGF1]
gi|292646655|gb|EFF64657.1| signal recognition particle protein [Turicibacter sanguinis PC909]
gi|325490903|gb|EGC93202.1| signal recognition particle protein [Turicibacter sp. HGF1]
Length = 475
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 159/348 (45%), Positives = 250/348 (71%), Gaps = 10/348 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MG +EL F ++P V ++ GLQG GKTT + K+++YL KK+ K+ +LVA DVYRPAA+
Sbjct: 87 MGDSAAELNFGHAKPAVFMMVGLQGAGKTTHTGKISSYLRKKEKKNPLLVACDVYRPAAV 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ +PVY GT + P IAK+ + A++ D+VI+DTAGRL ID+ +MDEL
Sbjct: 147 DQLKTIGKQLNIPVYEKGTSMNPVDIAKEAMTYARENGHDLVIIDTAGRLHIDEQLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K++K ++NP E+LLVVDAMTGQ+A + +F+ ++ +TG +LTKLDGD+RGGAALS++++
Sbjct: 207 KNIKELVNPQEILLVVDAMTGQDAVNVAQSFHDQLDLTGVVLTKLDGDTRGGAALSIRKI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK +G GE+++ LE F+P+RMA RILGMGDV++ +E+AQE +E++ ++ K+M+
Sbjct: 267 TNVPIKFIGLGEKLDTLEVFHPERMASRILGMGDVMTLIERAQENFDEEESMKLADKMMN 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE---KSLKIMEAMIEAMT 296
A +DFNDFLKQ + + ++G+ ++ MIPG+G Q+++ K + +EA+I +MT
Sbjct: 327 ATYDFNDFLKQMKQMKKLGAFEDILKMIPGVGN----QLKDINIDPKQMARVEAIIYSMT 382
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+ER+ P+L+ S R++R+A+ G +V++++ Q MR MK
Sbjct: 383 EQERKNPDLINAS--RKQRIAKGCGCDIAEVNRMIKQFTDMRKMMKKF 428
>gi|347525650|ref|YP_004832398.1| signal recognition particle protein [Lactobacillus ruminis ATCC
27782]
gi|345284609|gb|AEN78462.1| signal recognition particle protein [Lactobacillus ruminis ATCC
27782]
Length = 493
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 170/362 (46%), Positives = 249/362 (68%), Gaps = 10/362 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG L +K PTVI++ GLQG GKTT + KLA LKK+ + +++A DVYRPAA+
Sbjct: 99 MGESAVSLNKSKKIPTVIMMVGLQGAGKTTTAGKLAYKLKKEENARPLMIAADVYRPAAV 158
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+ + VPV+ GT+V P +I +QG++ A+++ D VI+DTAGRLQID+ +M+EL
Sbjct: 159 DQLKTVGKSIDVPVFELGTDVDPVEIVRQGMKLAEEQKNDYVIIDTAGRLQIDEKLMNEL 218
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K + +P E+LL VD+MTGQ A + FN + +TG +LTKLDGD+RGGAALS++ V
Sbjct: 219 ARIKELTHPDEILLTVDSMTGQNAVEVAQGFNDTLDVTGVVLTKLDGDTRGGAALSIRAV 278
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK +G+GE+M L+ FYPDRMA RILGMGD+L+ +EKAQ+ Q+ AEE+ K+
Sbjct: 279 TGKPIKFIGQGEKMTALDVFYPDRMASRILGMGDMLTLIEKAQQDFDQKKAEELADKMRE 338
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF++Q V MG + ++ MIPGM PA V+ K ++ +A++ +MTP
Sbjct: 339 NTFDFNDFIEQMEQVQNMGPIEDIMKMIPGMAN-NPALKNVKVDPKDIEHTKAIVYSMTP 397
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
+ERE P++L +P RR+R+A SG+ Q+V++++ Q QMR ++M M G+ +
Sbjct: 398 DEREDPDML--NPSRRRRIAAGSGRPIQEVNRMIKQFKQMR----DMMQKMTNGNFGGME 451
Query: 358 NL 359
N+
Sbjct: 452 NM 453
>gi|379731428|ref|YP_005323624.1| signal recognition particle protein [Saprospira grandis str. Lewin]
gi|378577039|gb|AFC26040.1| signal recognition particle protein [Saprospira grandis str. Lewin]
Length = 447
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 176/360 (48%), Positives = 241/360 (66%), Gaps = 5/360 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG+ S + K+ P ++L+AGLQG GKTT + KL+ +LK K+ K M++A DVYRPAAI
Sbjct: 87 MGGQ-SVGINIKANPGIVLIAGLQGSGKTTFTGKLSRHLKNKRNKKVMVIACDVYRPAAI 145
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL ++ EQVGV +Y P +IA G+ EAKK DVVIVDTAGRL +D+ MM E+
Sbjct: 146 NQLAVVAEQVGVDIYKEMDNKNPVEIALNGIAEAKKGKYDVVIVDTAGRLAVDEEMMTEI 205
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK + PTE L VVD+MTGQ+A FN I G +LTKLDGD+RGGAALS+K
Sbjct: 206 AAVKEAIQPTETLFVVDSMTGQDAVNTAKAFNDRINYDGVVLTKLDGDTRGGAALSIKYT 265
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
GKPIK + GE+M+ L+ F+PDRMA RILGMGD++S VEKAQE +++A+ ++KKI
Sbjct: 266 VGKPIKFISMGEKMDTLDIFHPDRMAQRILGMGDIISLVEKAQEDFDEKEAKRLEKKIRK 325
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFLKQ + +MG++ +IGMIPGMGKI + + + +EA+I +MTPEE
Sbjct: 326 NQFDFNDFLKQLAQIRKMGNLKSLIGMIPGMGKIAK-DIDIDDNAFNKIEAIILSMTPEE 384
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 359
R P ++ S R+KR+A+ SG ++++Q + Q QMR M + + GG + N+
Sbjct: 385 RGNPGVINGS--RKKRIAKGSGNRVEEINQFLRQFEQMRKMMFQMSKMQAGGGNMRMPNI 442
>gi|326335869|ref|ZP_08202048.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
338 str. F0234]
gi|325692013|gb|EGD33973.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
338 str. F0234]
Length = 448
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 170/335 (50%), Positives = 233/335 (69%), Gaps = 5/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG+ + + + P+VIL++GLQG GKTT S KLAN+LK K+ K +LVA DVYRPAAI
Sbjct: 86 MGGDATGINLS-GNPSVILMSGLQGSGKTTFSGKLANFLKTKKNKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL I+GEQ+GVPV++ P IA++GL+ AK +VVI+DTAGRL D+ MM E+
Sbjct: 145 DQLHIVGEQIGVPVFSERGNNNPVDIAQKGLQYAKSNGFNVVIIDTAGRLAADEQMMKEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++ + +NP E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAA+S+K V
Sbjct: 205 AEIHKAVNPQETLFVVDAMTGQDAVNTAKAFNDVLDFDGVILTKLDGDTRGGAAISIKSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+M+ ++ FYPDRMA RILGMGDV+S VE+AQE +E A ++QKKI
Sbjct: 265 VNKPIKFVGTGEKMDAIDVFYPDRMADRILGMGDVVSLVERAQEQFDEEQARKLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFL Q + + +MGSM ++GM+PG+GK + ++ + K +EA+I +MTP E
Sbjct: 325 NQFGFDDFLAQIQQIKKMGSMKDLLGMLPGVGKAVK-DLDISDDAFKYIEAIIFSMTPAE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
R P ++ S R+ R+A+ SG+ +V+QL+ Q
Sbjct: 384 RSNPSIINTS--RKNRIAKGSGRNIAEVNQLLKQF 416
>gi|429205348|ref|ZP_19196625.1| signal recognition particle protein [Lactobacillus saerimneri 30a]
gi|428146420|gb|EKW98659.1| signal recognition particle protein [Lactobacillus saerimneri 30a]
Length = 479
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 170/342 (49%), Positives = 239/342 (69%), Gaps = 8/342 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L +K PT+I++ GLQG GKTT ++KLA LK++ K+ +++A DVYRPAAI
Sbjct: 87 MGDEAVPLNHSKKIPTIIMMVGLQGAGKTTTASKLAAKLKRENKARPLMIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL ILG++ +PV+ GT+V P +I +QGL +A D V +DTAGRLQID+ +M EL
Sbjct: 147 EQLKILGKENDIPVFEMGTDVSPVEIVRQGLAQATANKNDYVFIDTAGRLQIDEKLMAEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++ + P E+LL VDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 AQIEELAQPDEILLTVDAMTGQNAVEVAQGFNDQLNITGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK +G+GE+M+DL+ FYPDRMA RILGMGD+L+ +EKAQ E A+++++K+
Sbjct: 267 TGKPIKFIGQGEKMDDLDVFYPDRMASRILGMGDMLTLIEKAQRDYDAEKAKKLEEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIME---AMIEAMT 296
FDFNDFL Q + MGS+ +I MIPG+ PA ++ A K ME A++ +MT
Sbjct: 327 NTFDFNDFLDQMNQIQNMGSLQDIIKMIPGLAN-NPA-LKNANIDPKDMERTKAIVYSMT 384
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 338
ERE P+LL +P RR+R+A SG+ Q+V++++ Q QMR
Sbjct: 385 KAERENPDLL--NPSRRRRIAAGSGRPIQEVNRMIKQFKQMR 424
>gi|392331490|ref|ZP_10276105.1| signal recognition particle subunit FFH/SRP54 [Streptococcus canis
FSL Z3-227]
gi|391419169|gb|EIQ81981.1| signal recognition particle subunit FFH/SRP54 [Streptococcus canis
FSL Z3-227]
Length = 522
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 162/347 (46%), Positives = 243/347 (70%), Gaps = 4/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +EL + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGAETAELEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GT+ +I ++GLE+A++ D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQISVPVFEMGTDHSAVEIVRRGLEQARENRNDYVLIDTAGRLQIDEKLMEEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK ++NP ++LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E+
Sbjct: 207 RDVKGLVNPNDILLVVDSMIGQEAANVAEEFNRQLSITGLVLTKIDGDTRGGAALSVREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF+ Q V MG M ++ MIPGM G + ++ +K + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLNQVQNMGPMEDLLKMIPGMAGNPALSHIKVDDKQIARKRAIVSSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM 345
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ +M
Sbjct: 387 ERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKTMMQGIM 431
>gi|78188776|ref|YP_379114.1| Signal recognition particle protein [Chlorobium chlorochromatii
CaD3]
gi|78170975|gb|ABB28071.1| signal recognition particle subunit FFH/SRP54 (srp54) [Chlorobium
chlorochromatii CaD3]
Length = 451
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 183/343 (53%), Positives = 236/343 (68%), Gaps = 5/343 (1%)
Query: 1 MGGEVSELVFA-KSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAI 59
MGGE L + K P +I++AGLQG GKTT AKLA L+K GK+ ML+A DVYRPAA+
Sbjct: 88 MGGEQKPLNLSPKKLPAIIMVAGLQGSGKTTFCAKLALRLRKNGKNPMLIAADVYRPAAV 147
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LGEQV VPV++ E + A QGLE AK DVVIVDTAGRLQID+AMM E
Sbjct: 148 DQLKALGEQVEVPVFSV-DEKDAMKAALQGLEAAKAAAKDVVIVDTAGRLQIDQAMMAEA 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K L P E+L VVD+M GQEA FN + G +LTKLDGD+RGGAALS+++V
Sbjct: 207 EALKNALKPDELLFVVDSMMGQEAVNTAKAFNDRLDFDGVVLTKLDGDARGGAALSIRQV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK + GE+++DL+ FYPDRMA RILGMGD++SFVEKAQE + + A EMQKK+M
Sbjct: 267 VEKPIKFISIGEKVDDLDIFYPDRMAQRILGMGDIISFVEKAQENLDLDKAIEMQKKLMK 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FD NDF Q + + +MGS+ +I M+PG+ K+ P Q E K +EAMI +MT EE
Sbjct: 327 NEFDLNDFFDQLQQLKKMGSIQGLIEMVPGLNKMVPKQELE-NLDFKPIEAMISSMTKEE 385
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
R PE++ S RR+R+A+ SG+ Q+V+ L+ Q +M+ MK
Sbjct: 386 RSNPEMINGS--RRQRIARGSGRKVQEVNLLLKQFGEMKKMMK 426
>gi|50914250|ref|YP_060222.1| signal recognition particle subunit FFH [Streptococcus pyogenes
MGAS10394]
gi|50903324|gb|AAT87039.1| signal recognition particle subunit FFH [Streptococcus pyogenes
MGAS10394]
Length = 522
Score = 333 bits (855), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 166/352 (47%), Positives = 243/352 (69%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 89 LGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEEDARPLMIAADIYRPAAI 148
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GT+ I ++GLE+A++ + D V++DTAGRLQID+ +M+EL
Sbjct: 149 DQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARENHNDYVLIDTAGRLQIDEKLMEEL 208
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E+
Sbjct: 209 RDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREI 268
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GER+ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 269 TGKPIKFTGTGERITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 328
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP
Sbjct: 329 NTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPA 388
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 389 ERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 435
>gi|374298883|ref|YP_005050522.1| signal recognition particle protein [Desulfovibrio africanus str.
Walvis Bay]
gi|332551819|gb|EGJ48863.1| signal recognition particle protein [Desulfovibrio africanus str.
Walvis Bay]
Length = 508
Score = 333 bits (855), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 169/349 (48%), Positives = 244/349 (69%), Gaps = 5/349 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGK-SCMLVAGDVYRPAAI 59
+GG+ S S+P +++ GLQG GKTT + KLA YL+++ K LV DVYRPAAI
Sbjct: 86 LGGKTSAFDVKGSKPLTVMMVGLQGSGKTTSAGKLALYLRREHKMKPFLVPADVYRPAAI 145
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG Q+ VPVY + T++ P I + L+ AK K D+V+ DTAGRL ID+ +M+EL
Sbjct: 146 DQLTKLGAQIDVPVYPSSTDMNPVDICRDALQVAKDKGYDLVLFDTAGRLHIDERLMEEL 205
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++K ++P E+L V DAMTGQ+A + +F+ ++ I+G +LTK+DGD+RGGAALS+K V
Sbjct: 206 ANIKAAVSPREILFVADAMTGQDAVNVAQSFDAKLEISGVVLTKMDGDARGGAALSIKSV 265
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GK +K VG GE++ ++E F+PDR+A RILGMGDVL+ +EKAQ +++A+E+ KK
Sbjct: 266 TGKSVKFVGMGEKLSEMEVFHPDRIASRILGMGDVLTLIEKAQGEFSEDEAQELGKKFQK 325
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
A+FDF DF Q R + ++GS+ ++ +IPGMGK+T ++ EK +K +EA+I +MT
Sbjct: 326 ASFDFEDFRTQMRRLKKLGSLEGLLKLIPGMGKLTKQLGEMSVHEKEMKRVEAIISSMTM 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
EER KPE+L S RR+R+A SG + +QV+QLV QMR M+ +MG
Sbjct: 386 EERRKPEVLNVS--RRRRIAAGSGTSLEQVNQLVKNFDQMRKMMQQVMG 432
>gi|304383803|ref|ZP_07366261.1| signal recognition particle protein [Prevotella marshii DSM 16973]
gi|304335059|gb|EFM01331.1| signal recognition particle protein [Prevotella marshii DSM 16973]
Length = 452
Score = 333 bits (855), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 175/373 (46%), Positives = 250/373 (67%), Gaps = 9/373 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG+ +E V K+RP +IL++GLQG GKTT S KLAN LK KQ + +LVA DVYRPAAI
Sbjct: 86 MGGQATE-VNLKNRPAIILMSGLQGSGKTTFSGKLANLLKTKQHRHPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL ++G Q+GV VY+ +IA+ ++ AK K+ D V++DTAGRL +D+ MM E+
Sbjct: 145 EQLRVVGTQIGVEVYSEPDSKDVVEIAQHAIQHAKAKSYDTVVIDTAGRLAVDEEMMSEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K+ + P E L VVDAMTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 ATLKKAVTPDETLFVVDAMTGQDAVNTAKEFNDRLNFDGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+ME ++ F+PDRMA RILGMGD++S VE+AQE +E+A +Q+KI
Sbjct: 265 VTKPIKFIGTGEKMEAIDVFHPDRMADRILGMGDIVSLVERAQEQFDEEEARRLQRKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDF DFL Q + + +MG++ + MIPG+GK + + + K +EA+I +MTP+E
Sbjct: 325 NKFDFEDFLNQIQQIKKMGNLKDLAAMIPGVGKAIK-DIDIDDNAFKGIEAIIRSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 359
R PE+L S R++R+A+ SG Q++++L+ Q QMR MK +M GG+ + +
Sbjct: 384 RTHPEILNTS--RKQRIAKGSGTDIQEINKLLKQFEQMRKMMK----MMSGGAGSNMMRM 437
Query: 360 EDALKSEQKAPPG 372
A+K+ + PG
Sbjct: 438 AGAMKNMRGRMPG 450
>gi|386344584|ref|YP_006040748.1| signal recognition particle protein [Streptococcus thermophilus JIM
8232]
gi|339278045|emb|CCC19793.1| signal recognition particle [Streptococcus thermophilus JIM 8232]
Length = 520
Score = 333 bits (855), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 169/353 (47%), Positives = 240/353 (67%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E SE+ + PT+I++ GLQG GKTT + KLAN L K+Q M++A D+YRPAAI
Sbjct: 87 LGSETSEIEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEQEARPMMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I + GLE+A+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTETPAVEIVRNGLEQARANKNDYVLIDTAGRLQIDETLMKEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K +P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E+
Sbjct: 207 RDIKDFAHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAALSIREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TDKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ M+PGM P A V+ EK + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NPALANVKVDEKQIARKRAIVLSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|386714307|ref|YP_006180630.1| signal recognition particle protein [Halobacillus halophilus DSM
2266]
gi|384073863|emb|CCG45356.1| signal recognition particle protein [Halobacillus halophilus DSM
2266]
Length = 446
Score = 333 bits (855), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 167/346 (48%), Positives = 245/346 (70%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAI 59
MGG+ S++ AK PTVI++ GLQG GKTT + KLAN L+K + +L A DVYRPAAI
Sbjct: 87 MGGDESKIAVAKRPPTVIMMVGLQGAGKTTTTGKLANVLRKNHNRKPLLAAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL +G+Q+ +PV++ GTE P IAK +E+AK++N D VIVDTAGRL +D +M EL
Sbjct: 147 QQLETIGKQLTMPVHSEGTEADPVDIAKNAIEKAKEENHDYVIVDTAGRLHVDGELMGEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K +NP E+ LVVDAMTGQ+A + +F+ ++ ITG +LTKLDGD+RGGAALS+K V
Sbjct: 207 QRIKEAVNPDEIFLVVDAMTGQDAVNVAQSFDDQLDITGVLLTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE+++ LEPF+P+RMA RILGMGD+L+ +EKAQ + ++ A+E++ K+ +
Sbjct: 267 TGKPIKYAGMGEKLDQLEPFHPERMASRILGMGDMLTLIEKAQTQVDEKQAKELESKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
A+F F DFL Q V MG + +I MIPG K+ + +K + +EA+I++MT +
Sbjct: 327 ASFTFEDFLDQMEQVKNMGPLDEIINMIPGANKMKGLKNASFDDKQIVHVEAIIQSMTKK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER+ P ++ S R+KR+A+ SG + ++++L+ Q +M+ MK +
Sbjct: 387 ERQDPSVMNAS--RKKRIAKGSGTSVSEINRLLKQFEEMKKMMKQM 430
>gi|377809757|ref|YP_005004978.1| signal recognition particle protein [Pediococcus claussenii ATCC
BAA-344]
gi|361056498|gb|AEV95302.1| signal recognition particle protein [Pediococcus claussenii ATCC
BAA-344]
Length = 476
Score = 333 bits (855), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 177/359 (49%), Positives = 242/359 (67%), Gaps = 10/359 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MG E + L + PT+I++ GLQG GKTT + KLA LK +Q +L+A DVYRPAA+
Sbjct: 87 MGSEDAPLNKSDHIPTIIMMTGLQGAGKTTTTGKLALKLKNEQNARPLLIAADVYRPAAV 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQLV +G+++ VPVY GT P I K+GLE A++ + D V +DTAGRLQID+A+M EL
Sbjct: 147 DQLVQVGQRIDVPVYEEGTSANPVDIVKRGLEVARENHNDYVFIDTAGRLQIDEALMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
D+K + +P E+LLVVDAMTGQ A FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 ADIKALAHPDEILLVVDAMTGQNAVNTAEGFNEKLDITGIVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIKLVG+GE+MEDL+ F+PDRMA RILGMGD+L+ +EK Q + ++ A EM KI
Sbjct: 267 TGKPIKLVGQGEKMEDLDVFHPDRMASRILGMGDMLTLIEKTQRDVDEKQAAEMADKIRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA + K ++ +A+I +MT
Sbjct: 327 NTFDFNDFVDQLVQVQNMGPMEDIMKMIPGMAN-NPAMKNMNVNPKDIEHTKAIIYSMTA 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 356
ERE P++L +P RR+R+A SG+ +V++++ Q Q MK +M M G+ +
Sbjct: 386 AEREDPDIL--NPSRRRRIAAGSGQPVVEVNRMIKQFNQ----MKKMMNQMSKGNFNGM 438
>gi|450159193|ref|ZP_21879300.1| signal recognition particle protein [Streptococcus mutans 66-2A]
gi|449241479|gb|EMC40105.1| signal recognition particle protein [Streptococcus mutans 66-2A]
Length = 516
Score = 333 bits (855), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 166/352 (47%), Positives = 241/352 (68%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
+FDFNDF++Q V MG M ++ MIPGM + + V+ E + A++ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVQNMGPMEDILKMIPGMANNSALSNVKVDEDEIARKRAIVSSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 387 ERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|325978265|ref|YP_004287981.1| signal recognition particle subunit FFH/SRP54 protein
[Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
gi|325178193|emb|CBZ48237.1| Signal recognition particle subunit FFH/SRP54 protein
[Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
Length = 521
Score = 333 bits (855), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 169/353 (47%), Positives = 241/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +EL + PT+I++ GLQG GKTT + KLAN L K + +++A D+YRPAAI
Sbjct: 87 LGSETAELEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKDENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG Q+ VPV+ GT+ +I GL +AK+ + D VI+DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGNQINVPVFDMGTDHSAVEIVTNGLAQAKENHNDYVIIDTAGRLQIDEKLMEEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + NP E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E+
Sbjct: 207 RDVKALANPNEILLVVDSMIGQEAANVADEFNKQLDITGVVLTKIDGDTRGGAALSIREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA + EK++ A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALKNFKVDEKAVARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|254852709|ref|ZP_05242057.1| signal recognition particle protein [Listeria monocytogenes FSL
R2-503]
gi|258606030|gb|EEW18638.1| signal recognition particle protein [Listeria monocytogenes FSL
R2-503]
Length = 467
Score = 333 bits (855), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 169/340 (49%), Positives = 245/340 (72%), Gaps = 4/340 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI
Sbjct: 87 MGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK++++D VI+DTAGRL ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEEHLDYVIIDTAGRLHIDETLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K VK + PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KQVKEIATPTEILLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK + GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + E + M++K+
Sbjct: 267 TGKPIKFIATGEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAMEQKMKD 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
+ +DFL+Q + V +MG + ++ M+PG K+ + +K L +EA+I++MT
Sbjct: 327 NSMTLDDFLEQLQQVKQMGPLDELLKMMPGANKMKGLDNMNVDDKQLGHIEAIIKSMTKN 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 338
E++ P+++ S RRKR+A+ SG+ Q++++L+ Q +M+
Sbjct: 387 EKDNPDIINAS--RRKRIARGSGRPVQEINRLLKQFGEMK 424
>gi|347534366|ref|YP_004841036.1| Signal recognition particle protein [Lactobacillus sanfranciscensis
TMW 1.1304]
gi|345504422|gb|AEN99104.1| Signal recognition particle protein [Lactobacillus sanfranciscensis
TMW 1.1304]
Length = 479
Score = 333 bits (855), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 173/362 (47%), Positives = 249/362 (68%), Gaps = 10/362 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MGGE + L + PT+I++AGLQG GKTT KLA LK+ + +++A DVYRPAAI
Sbjct: 87 MGGETTTLKKSNKIPTIIMMAGLQGAGKTTTVGKLAKMLKEDDNARPLMIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ VPV+ GTEV P +I + GL+ AK+ + D V +DTAGRLQID+ +M+EL
Sbjct: 147 EQLQQIGKQIDVPVFEEGTEVNPVKIVEDGLKVAKENHNDYVFIDTAGRLQIDEKLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K++K V PT++LLVVDAMTGQ A + FN + ITG +LTKLDGD+RGGAALS+K V
Sbjct: 207 KEIKEVAKPTDILLVVDAMTGQNAVNMAEGFNEALDITGVVLTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPI G+GE+M++L+ F+PDRMA RILGMGDVLS VEK ++ + ++ + E+ +K+
Sbjct: 267 TGKPILFTGQGEKMDNLDVFHPDRMASRILGMGDVLSLVEKTKKNIDEKKSMELAEKMKE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
F+F+DFL Q + + MG + ++ MIPGM PA V K L ++A+I +MT
Sbjct: 327 NTFNFDDFLDQLQQIQNMGPLKNLMAMIPGMAN-NPALQNVDMDPKDLDRIKAIIYSMTN 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
EERE P++L +P RR+R+A+ S + Q V++L+ Q Q MK +M + G++ +
Sbjct: 386 EERENPDVL--NPSRRRRIAKGSAQPIQSVNRLIKQFNQ----MKKMMNQISNGNMSGME 439
Query: 358 NL 359
N+
Sbjct: 440 NM 441
>gi|255534965|ref|YP_003095336.1| Signal recognition particle, subunit Ffh SRP54 [Flavobacteriaceae
bacterium 3519-10]
gi|255341161|gb|ACU07274.1| Signal recognition particle, subunit Ffh SRP54 [Flavobacteriaceae
bacterium 3519-10]
Length = 455
Score = 333 bits (855), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 169/333 (50%), Positives = 232/333 (69%), Gaps = 4/333 (1%)
Query: 3 GEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQ 61
G+ E + +P+VIL+AGLQG GKTT S KLANYLK K+ K +LVA DVYRPAAI+Q
Sbjct: 87 GKTHEGINLSGKPSVILIAGLQGSGKTTFSGKLANYLKEKRNKKPLLVACDVYRPAAIEQ 146
Query: 62 LVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKD 121
L ILG+Q G+PVYT + PS IA+ ++ AK+ N DVVIVDTAGRL ID+ MM+E+K
Sbjct: 147 LKILGQQTGIPVYTEEGALNPSSIAENAVKFAKENNHDVVIVDTAGRLAIDEQMMNEIKS 206
Query: 122 VKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSG 181
V + P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL+++ V
Sbjct: 207 VHYFIKPNETLFVVDSMTGQDAVNTAKAFNEALNFDGVVLTKLDGDTRGGAALTIRSVVE 266
Query: 182 KPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSAN 241
KPIK + GE+ME L+ FYP+RMA RILGMGDV+S VE+AQE +E+A+++ KKI
Sbjct: 267 KPIKFISTGEKMEALDVFYPERMADRILGMGDVVSLVERAQEQFDEEEAKKLHKKIAKNE 326
Query: 242 FDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEERE 301
F F+DFLKQ + +MG+M ++GMIPG+GK V + + K +EA+I +MTP+ER
Sbjct: 327 FGFDDFLKQINQIKKMGNMKDLMGMIPGVGKAI-KDVDIQDDAFKHIEAIIHSMTPDERR 385
Query: 302 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
+P ++ + R+ R+A+ +G+ + V+ L+ Q
Sbjct: 386 RPSII--NTQRKNRIARGAGRKIEDVNALMKQF 416
>gi|163814209|ref|ZP_02205601.1| hypothetical protein COPEUT_00363 [Coprococcus eutactus ATCC 27759]
gi|158450658|gb|EDP27653.1| signal recognition particle protein [Coprococcus eutactus ATCC
27759]
Length = 448
Score = 333 bits (855), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 177/354 (50%), Positives = 238/354 (67%), Gaps = 10/354 (2%)
Query: 1 MGGEVSELVFAKSRP----TVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRP 56
MG E++E+ K RP T+I++ GLQG GKTT +AKLA K +GK +LVA DVYRP
Sbjct: 87 MGSEMTEI---KLRPSNEITIIMMCGLQGAGKTTTAAKLAYQFKNKGKKPLLVACDVYRP 143
Query: 57 AAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMM 116
AAI QL + GE+VGVPV+ G KP IAK ++ A K N+++V +DTAGRL +D+ MM
Sbjct: 144 AAIKQLQVNGEKVGVPVFAMGDNNKPLDIAKAAIQHAAKNNINLVFLDTAGRLHVDEDMM 203
Query: 117 DELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSV 176
DEL ++K L+ +L VD+MTGQ+A + TTFN +IGI G ILTKLDGD+RGGAALS+
Sbjct: 204 DELAEIKANLDIAYTILTVDSMTGQDAVNVATTFNDKIGIDGVILTKLDGDTRGGAALSI 263
Query: 177 KEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKK 236
K V+GKPI G GE++ DLEPFYPDRMA RILGMGDV S +EKAQ + +E A+EM++K
Sbjct: 264 KAVTGKPILYSGMGEKLTDLEPFYPDRMASRILGMGDVESLIEKAQSAIDEEKAKEMEQK 323
Query: 237 IMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMT 296
A+FDFNDFL Q + +MG M ++ M+PGM V E + K +A++ +MT
Sbjct: 324 FRKASFDFNDFLDQMAQLEQMGGMQEILSMMPGMAS-QMKNVEIDENAAKTPKAIVLSMT 382
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
P ER + + SP R+KR+A +G V++ + Q Q + MK + G+M G
Sbjct: 383 PRERSLQDPI--SPSRKKRIADGAGVQIADVNRFLKQFEQSKKMMKQMSGMMGG 434
>gi|340346556|ref|ZP_08669679.1| signal recognition particle protein [Prevotella dentalis DSM 3688]
gi|433651816|ref|YP_007278195.1| signal recognition particle protein [Prevotella dentalis DSM 3688]
gi|339611486|gb|EGQ16311.1| signal recognition particle protein [Prevotella dentalis DSM 3688]
gi|433302349|gb|AGB28165.1| signal recognition particle protein [Prevotella dentalis DSM 3688]
Length = 454
Score = 333 bits (855), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 176/347 (50%), Positives = 239/347 (68%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE +EL RP V+L++GLQG GKTT S KLAN LK KQ K +LVA DVYRPAAI
Sbjct: 86 MGGEAAELNLT-GRPAVVLMSGLQGSGKTTFSGKLANMLKSKQNKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL ++ Q+ VPVY+ + ++IA ++EAK K DVVI+DTAGRL +D+ MM+E+
Sbjct: 145 EQLKVVAAQLDVPVYSEDGNKQVNEIALHAIQEAKAKGNDVVIIDTAGRLAVDEEMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K ++P E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAALS++ V
Sbjct: 205 ASLKETVHPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVILTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+M+ ++ F+PDRMA RILGMGDV+S VE+AQE +E+A+ +QKKI
Sbjct: 265 VTKPIKFIGTGEKMDAIDVFHPDRMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK V + + K +EA+I +MTP+E
Sbjct: 325 NKFDFNDFLGQIEQIKKMGNLKDLASMIPGVGKAIK-DVDIDDNAFKGIEAIIRSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R PE+L +S RR R+A+ SG + Q+V++L+ Q Q R MK + G
Sbjct: 384 RVNPEILNQS--RRLRIAKGSGTSIQEVNRLIKQFDQTRKMMKMVTG 428
>gi|393788846|ref|ZP_10376971.1| signal recognition particle protein [Bacteroides nordii CL02T12C05]
gi|392653680|gb|EIY47334.1| signal recognition particle protein [Bacteroides nordii CL02T12C05]
Length = 440
Score = 333 bits (855), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 172/347 (49%), Positives = 236/347 (68%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE E + P VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI
Sbjct: 86 MGGETVE-IDTDGHPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +L EQ+ VP+Y+ P +IA+ ++EAK K D+VIVDTAGRL +D+ MM+E+
Sbjct: 145 EQLRVLAEQIEVPMYSEPDSKNPVEIAQNAIKEAKAKGYDLVIVDTAGRLAVDEEMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K+ +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 AAIKKAINPNEILFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAALSIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP E
Sbjct: 325 NQFDFNDFLSQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIHSMTPAE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R PE+L S RR R+A+ SG T Q+V++L+ Q Q R MK + G
Sbjct: 384 RSNPEILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|306831354|ref|ZP_07464514.1| signal recognition particle protein [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
gi|304426590|gb|EFM29702.1| signal recognition particle protein [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
Length = 521
Score = 333 bits (855), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 169/353 (47%), Positives = 241/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +EL + PT+I++ GLQG GKTT + KLAN L K + +++A D+YRPAAI
Sbjct: 87 LGSETAELEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKDENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG Q+ VPV+ GT+ +I GL +AK+ + D VI+DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGSQINVPVFDMGTDHSAVEIVTNGLAQAKENHNDYVIIDTAGRLQIDEKLMEEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + NP E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E+
Sbjct: 207 RDVKALANPNEILLVVDSMIGQEAANVADEFNKQLDITGVVLTKIDGDTRGGAALSIREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA + EK++ A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALKNFKVDEKAVARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|414160540|ref|ZP_11416806.1| signal recognition particle protein [Staphylococcus simulans
ACS-120-V-Sch1]
gi|410878060|gb|EKS25949.1| signal recognition particle protein [Staphylococcus simulans
ACS-120-V-Sch1]
Length = 455
Score = 333 bits (855), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 165/346 (47%), Positives = 251/346 (72%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + A PTV+++ GLQG GKTT + KLA + KK K +LVA D+YRPAAI
Sbjct: 87 MGGENATVNMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ +PVY+ G +V+P QI L+ AK++++D VI+DTAGRL ID+ +M+EL
Sbjct: 147 DQLQTVGKQLDIPVYSEGDQVQPQQIVDNALKHAKEEHLDFVIIDTAGRLHIDEKLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+VK + P E++LVVDAMTGQ+A + +F+ ++G+TG LTKLDGD+RGGAALS++ V
Sbjct: 207 AEVKELSKPNEIMLVVDAMTGQDAVNVAQSFDDQLGVTGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK +G E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + + A++++KK+ +
Sbjct: 267 TQKPIKFIGVSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDESKAKDLEKKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
A+F +DFL+Q V +G + ++ MIPGMGK+ ++ ++K + ++A+I++MT
Sbjct: 327 ASFTLDDFLEQLDQVKNLGPLDEIMKMIPGMGKMKGMDKLNMSDKQIDHIKAIIQSMTLA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ERE+PE+L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 387 ERERPEILNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|409387404|ref|ZP_11239634.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Lactococcus raffinolactis 4877]
gi|399205505|emb|CCK20549.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Lactococcus raffinolactis 4877]
Length = 506
Score = 333 bits (855), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 171/348 (49%), Positives = 240/348 (68%), Gaps = 4/348 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAI 59
+GG +EL + PT+I++AGLQG GKTT + KLA LK+ + +++A DVYRPAAI
Sbjct: 87 LGGGEAELAKSPKIPTIIMMAGLQGAGKTTFAGKLAKRLKETENARTLMIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G QV VPVY GT+V P +I + GL A +K D V++DTAGRL+ID+ +M+EL
Sbjct: 147 EQLKTVGSQVDVPVYDEGTDVNPVEIVRHGLALAAEKRNDYVLIDTAGRLEIDEKLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K + PTE+LLVVDAMTGQ AA + FN + ITG I+TKLDGD+RGGAALS++E+
Sbjct: 207 VQIKDLAQPTEILLVVDAMTGQVAADVAKKFNETLEITGVIITKLDGDTRGGAALSIREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG GE++ DLE FYPDRM+ RILGMGD+L+ +EKAQ + + +M +K+
Sbjct: 267 TGKPIKFVGTGEKLTDLEVFYPDRMSSRILGMGDMLTLIEKAQSQFDEAQSAKMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT-PAQVREAEKSLKIMEAMIEAMTPE 298
+FDFNDF++Q V MG + ++ MIPGM +I A ++ EK + A + +MTPE
Sbjct: 327 NSFDFNDFIEQLDQVQSMGPLDEIMKMIPGMSEIPGAANIKVDEKDIARKRAAVLSMTPE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
ER P++L +P RR+R+A SG T +V++L+ Q + + M LM
Sbjct: 387 ERANPDIL--TPSRRRRIAAGSGNTFIEVNKLIKQFNESKKMMSGLMN 432
>gi|300777801|ref|ZP_07087659.1| signal recognition particle protein [Chryseobacterium gleum ATCC
35910]
gi|300503311|gb|EFK34451.1| signal recognition particle protein [Chryseobacterium gleum ATCC
35910]
Length = 453
Score = 333 bits (854), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 174/335 (51%), Positives = 230/335 (68%), Gaps = 5/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG E + +PTVIL+AGLQG GKTT S KLANYL+ K+ K +LVA DVYRPAAI
Sbjct: 86 MGGS-QEGINLSGKPTVILIAGLQGSGKTTFSGKLANYLQTKRNKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +LG Q+ VPVYT PS IA+ + AK DVVIVDTAGRL ID+ MM+E+
Sbjct: 145 DQLKVLGGQIKVPVYTEEGSTNPSTIAENAINFAKSNGHDVVIVDTAGRLAIDEQMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K V + P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL+++ V
Sbjct: 205 KSVHYFIKPQETLFVVDSMTGQDAVNTAKAFNDALNFDGVVLTKLDGDTRGGAALTIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK + GE+ME L+ FYP+RMA RILGMGDV+S VEKAQE +E+A+++ KKI
Sbjct: 265 VEKPIKFISTGEKMEALDLFYPERMADRILGMGDVVSLVEKAQEQFDEEEAKKLHKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFLKQ + +MG+M ++GMIPG+GK V ++ + K +EA+I +MTPEE
Sbjct: 325 NEFGFDDFLKQINQIKKMGNMKDLMGMIPGVGKAI-KDVEISDDAFKHIEAIIYSMTPEE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
R KP ++ + R+ R+A+ +G+ + V+QL+ Q
Sbjct: 384 RRKPSII--NTQRKNRIAKGAGRKIEDVNQLMKQF 416
>gi|433448715|ref|ZP_20411581.1| signal recognition particle protein [Weissella ceti NC36]
gi|429539642|gb|ELA07678.1| signal recognition particle protein [Weissella ceti NC36]
Length = 479
Score = 333 bits (854), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 167/342 (48%), Positives = 239/342 (69%), Gaps = 10/342 (2%)
Query: 15 PTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPV 73
PTVI++ GLQG GKTT + KLA LK++ + ++A D+YRPAAIDQL +LG+Q+ VPV
Sbjct: 101 PTVIMMVGLQGAGKTTTAGKLAYKLKEENNARPFMIAADIYRPAAIDQLKVLGQQIDVPV 160
Query: 74 YTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLL 133
+ GT+V P +I +QG++ A++ D V +D AGRLQID+A+M EL D+K + P E++L
Sbjct: 161 FDLGTDVDPREIVRQGMDAAREAKADYVFIDAAGRLQIDEALMQELADIKEIAQPDEIML 220
Query: 134 VVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERM 193
VVDAMTGQ A FN +GITG LTKLDGD+RGGAALS++ V+G+PIK VG+GE+M
Sbjct: 221 VVDAMTGQNATETAEGFNERLGITGVTLTKLDGDTRGGAALSIRAVTGQPIKFVGQGEKM 280
Query: 194 EDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRT 253
DL+ F+PDRMA RILGMGD+L+ +EKAQ+ ++ A+ +K+ FDFNDFL Q +
Sbjct: 281 TDLDVFHPDRMASRILGMGDMLTLIEKAQKDFDEKQAQATMEKMKDKTFDFNDFLDQMQQ 340
Query: 254 VARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPV 311
V MG M ++ MIPGM PA V+ +K + ++A++ +MTP ERE P+LL +P
Sbjct: 341 VQNMGPMEDILKMIPGMAN-NPALQNVQINDKDMAHIKAIVYSMTPAERENPDLL--NPS 397
Query: 312 RRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 353
RR+R+A +G+ +V++L+ Q + MK +MG + G++
Sbjct: 398 RRRRLAAGAGRPVVEVNKLIKQFNE----MKKMMGQVMNGNM 435
>gi|325269145|ref|ZP_08135765.1| signal recognition particle protein [Prevotella multiformis DSM
16608]
gi|324988532|gb|EGC20495.1| signal recognition particle protein [Prevotella multiformis DSM
16608]
Length = 453
Score = 333 bits (854), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 175/347 (50%), Positives = 238/347 (68%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE L + RP VIL++GLQG GKTT S KLAN LK K+ K+ +LVA DVYRPAA+
Sbjct: 86 MGGEAVGLNLS-GRPAVILMSGLQGSGKTTFSGKLANMLKTKEHKNPLLVACDVYRPAAV 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL ++G QVG PVY+ ++IA + EAK + DVVI+DTAGRL +D+ MMDE+
Sbjct: 145 EQLKVVGGQVGAPVYSEPGNKNVNEIADHAIAEAKARGNDVVIIDTAGRLAVDEEMMDEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K +NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 ESLKNHVNPDETLFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A+ +QKKI
Sbjct: 265 VTKPIKFIGTGEKMEAVDVFHPGRMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP+E
Sbjct: 325 NQFDFNDFYNQIQQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIEAIIQSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 384 RSHPEVLNNS--RRQRIAKGSGTNLQEVNRLIKQFDQTRKMMKMVTG 428
>gi|449968858|ref|ZP_21812871.1| signal recognition particle protein [Streptococcus mutans 2VS1]
gi|450028539|ref|ZP_21832245.1| signal recognition particle protein [Streptococcus mutans G123]
gi|450056695|ref|ZP_21842180.1| signal recognition particle protein [Streptococcus mutans NLML4]
gi|450066939|ref|ZP_21846271.1| signal recognition particle protein [Streptococcus mutans NLML9]
gi|450092298|ref|ZP_21855923.1| signal recognition particle protein [Streptococcus mutans W6]
gi|450147551|ref|ZP_21875136.1| signal recognition particle protein [Streptococcus mutans 14D]
gi|449174709|gb|EMB77184.1| signal recognition particle protein [Streptococcus mutans 2VS1]
gi|449195624|gb|EMB96938.1| signal recognition particle protein [Streptococcus mutans G123]
gi|449206440|gb|EMC07143.1| signal recognition particle protein [Streptococcus mutans NLML4]
gi|449208373|gb|EMC08968.1| signal recognition particle protein [Streptococcus mutans NLML9]
gi|449218645|gb|EMC18650.1| signal recognition particle protein [Streptococcus mutans W6]
gi|449236954|gb|EMC35853.1| signal recognition particle protein [Streptococcus mutans 14D]
Length = 516
Score = 333 bits (854), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 168/353 (47%), Positives = 241/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ G E +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGIEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
+FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 386 EERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|145219743|ref|YP_001130452.1| signal recognition particle subunit FFH/SRP54 (srp54) [Chlorobium
phaeovibrioides DSM 265]
gi|145205907|gb|ABP36950.1| signal recognition particle subunit FFH/SRP54 (srp54) [Chlorobium
phaeovibrioides DSM 265]
Length = 449
Score = 333 bits (854), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 179/345 (51%), Positives = 235/345 (68%), Gaps = 5/345 (1%)
Query: 1 MGGEVSELVFAKSR-PTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAI 59
MGGE L + SR P V+++AGLQG GKTT +AKLA LKK G++ +LVA DVYRPAA+
Sbjct: 86 MGGEQKPLALSSSRLPAVVMVAGLQGSGKTTFAAKLAKRLKKSGRNPLLVAADVYRPAAV 145
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG +V VPV++ E ++A QGLE AK DV+IVDTAGRLQID AMM E
Sbjct: 146 DQLKTLGAEVSVPVFSI-EEKDAMKVAMQGLEAAKAGAHDVLIVDTAGRLQIDDAMMAEA 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K L P E+L VVD+M GQEA FN + G +LTKLDGDSRGGAALS++ V
Sbjct: 205 EALKNALKPDELLFVVDSMMGQEAVNTAKAFNDRLDFDGVVLTKLDGDSRGGAALSIRHV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK + GE+++DL+ FYPDRMA RILGMGD++SFVEKAQE + E +MQKK+M
Sbjct: 265 VEKPIKFMSVGEKVDDLDQFYPDRMAQRILGMGDIVSFVEKAQESLDMEATLQMQKKLMK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FD NDF Q + + +MGSM +I M+PG+ K+ P Q E K +EA+I +MT EE
Sbjct: 325 NEFDLNDFFDQLQQLKKMGSMQSLIEMVPGLNKMVPKQDLE-NLDFKPIEAIISSMTKEE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+ +PE++ S RR+R+A SG Q V+ L+ Q +M+ M+++
Sbjct: 384 KSRPEIINGS--RRQRIALGSGTRVQDVNMLLKQFGEMKKMMRSV 426
>gi|425736820|ref|ZP_18855096.1| signal recognition particle protein [Staphylococcus massiliensis
S46]
gi|425483292|gb|EKU50444.1| signal recognition particle protein [Staphylococcus massiliensis
S46]
Length = 457
Score = 333 bits (854), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 164/346 (47%), Positives = 248/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S + AK PTV+++ GLQG GKTT + KLA + KK K +LVA D+YRPAAI
Sbjct: 87 MGGENSSITMAKKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ +PVY+ G +VKP QI ++ AK++++D VI+DTAGRL ID+ +M EL
Sbjct: 147 NQLQTVGKQIDIPVYSEGDQVKPQQIVDNAIKHAKEEHLDFVIIDTAGRLHIDEGLMSEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + P E++LVVDAMTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V
Sbjct: 207 EDIKEITKPNEIMLVVDAMTGQDAVNVAESFDNQLDVTGVTLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGD+LS +EKAQ+ + QE A++++KK+ +
Sbjct: 267 TQKPIKFVGMSEKLDGLELFHPERMASRILGMGDMLSLIEKAQQDVDQEKAKDLEKKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
++F +DFL Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MT
Sbjct: 327 SSFTLDDFLVQLDQVKNLGPLDDIMKMIPGMNKVKGLDKMNMSEKQIDHIKAIIQSMTKY 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ERE PE + S R+KR+A+ SG++ Q+V++++ Q M+ MK
Sbjct: 387 EREHPEKINVS--RKKRIAKGSGRSLQEVNRILKQFNDMKKIMKQF 430
>gi|255524258|ref|ZP_05391217.1| signal recognition particle protein [Clostridium carboxidivorans
P7]
gi|296185380|ref|ZP_06853790.1| signal recognition particle protein [Clostridium carboxidivorans
P7]
gi|255512083|gb|EET88364.1| signal recognition particle protein [Clostridium carboxidivorans
P7]
gi|296050214|gb|EFG89638.1| signal recognition particle protein [Clostridium carboxidivorans
P7]
Length = 454
Score = 333 bits (854), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 163/333 (48%), Positives = 240/333 (72%), Gaps = 2/333 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S + F+ S T+I+L GLQG GKTT++ KLA +K+ K +L A D+YRPAAI
Sbjct: 87 MGSTESGVQFSSSGLTMIMLVGLQGAGKTTMAGKLALQFRKKNKKPLLAACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G+Q+ VPV+ G +V P I+K +E AK ++VVI+DTAGRL ID+ +M+ELK
Sbjct: 147 QLQVVGKQIDVPVFAMGDKVSPVDISKGAIEYAKNNGLNVVIIDTAGRLHIDEELMNELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
DVK + P E+LLVVDAMTGQ+A + +FN ++ I+G ILTKLDGD+RGGAALS+K ++
Sbjct: 207 DVKENVKPDEILLVVDAMTGQDAVNVANSFNDQLDISGVILTKLDGDTRGGAALSIKAMT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK VG GE+M D E F+PDRMA RILGMGDVLS +EKA++ + +E+A+++ ++MS
Sbjct: 267 DKPIKFVGLGEKMSDFEVFHPDRMASRILGMGDVLSLIEKAKQSIDEEEAKKIGSRMMSQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPE 298
F+ DFL + + +MG M++++ M+PG+ ++ + +EK + +EA+I +MT +
Sbjct: 327 EFNLEDFLSSMKQIKKMGPMNKLLEMVPGLNTKELQGVDLSGSEKEMAKIEAIISSMTVK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 331
ER P L++ SP R+KR++Q SG T QQV++++
Sbjct: 387 ERRNPSLVSGSPSRKKRISQGSGTTVQQVNKIL 419
>gi|19746132|ref|NP_607268.1| signal recognition particle -inhibited division protein
[Streptococcus pyogenes MGAS8232]
gi|19748308|gb|AAL97767.1| putative signal recognition particle -inhibited division protein
[Streptococcus pyogenes MGAS8232]
Length = 520
Score = 333 bits (854), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 166/352 (47%), Positives = 243/352 (69%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEEDARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GT+ I ++GLE+A++ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARENHNDYVLIDTAGRLQIDEKLMEEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E+
Sbjct: 207 RDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GER+ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGERITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP
Sbjct: 327 NTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 387 ERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|340352886|ref|ZP_08675720.1| signal recognition particle protein [Prevotella pallens ATCC
700821]
gi|339612202|gb|EGQ17015.1| signal recognition particle protein [Prevotella pallens ATCC
700821]
Length = 450
Score = 333 bits (854), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 177/360 (49%), Positives = 243/360 (67%), Gaps = 5/360 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE L +++P +IL++GLQG GKTT S KLAN LK K+ K +LVA DVYRPAAI
Sbjct: 86 MGGESVGLKL-ENKPAIILMSGLQGSGKTTFSGKLANLLKTKEHKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL ++GE V VPVY+ + IA+ ++EAK DVVI+DTAGRL +D MMDE+
Sbjct: 145 QQLKVVGESVDVPVYSEPDSKNVNAIAENAIKEAKSNGNDVVIIDTAGRLAVDAEMMDEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K+ +NP EVL VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 ESLKKHVNPDEVLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+M+ L+ F+P RMA RILGMGDV+S VE+AQE +E+A+ +QKKI
Sbjct: 265 VTKPIKFIGTGEKMDALDVFHPARMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP+E
Sbjct: 325 NKFDFNDFYNQIQQIKKMGNLKDLAAMIPGVGKAI-RDVDIDDNAFKGIEAIIQSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 359
R PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G G + + N+
Sbjct: 384 RTNPEILNNS--RRQRIAKGSGTNIQEVNRLIKQFEQTRKMMKMVTGSKMAGMMGKMKNM 441
>gi|322389552|ref|ZP_08063102.1| signal recognition particle protein [Streptococcus parasanguinis
ATCC 903]
gi|321143746|gb|EFX39174.1| signal recognition particle protein [Streptococcus parasanguinis
ATCC 903]
Length = 523
Score = 333 bits (854), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 167/353 (47%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E++ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV++ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFSLGTEVPAVEIVRQGLEQARANHNDYVLIDTAGRLQIDEKLMGEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDVKALAEPNEILLVVDAMIGQEAANVAREFNEQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+GRILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSGRILGMGDMLTLIEKASQEYDEKRSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ M+PGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NPAMKNLKVDEREIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GV+ G
Sbjct: 386 AERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|169830839|ref|YP_001716821.1| signal recognition particle protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169637683|gb|ACA59189.1| signal recognition particle protein [Candidatus Desulforudis
audaxviator MP104C]
Length = 452
Score = 333 bits (854), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 177/347 (51%), Positives = 238/347 (68%), Gaps = 6/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG+ + L A PTV++L GLQG GKTT AKLAN LKKQG+ +LVA DVYRPAAI
Sbjct: 87 MGGQNARLELAPKPPTVVMLVGLQGSGKTTTVAKLANLLKKQGRRPLLVAADVYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG Q+ VPV++ G E P IA LE +K DVVI+DTAGRL I++ +M EL+
Sbjct: 147 QLQVLGGQIDVPVFSMG-EQDPVSIAGAALESTRKGGQDVVIIDTAGRLHINEELMVELE 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E+LLVVDAMTGQ+A + +F+ + + G ILTKLDGD+RGGAALSV+ V+
Sbjct: 206 RIKAGVQPHEILLVVDAMTGQDAVTVAESFHQRLVLDGVILTKLDGDTRGGAALSVRAVT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK VG GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ A E++KK+ SA
Sbjct: 266 GCPIKFVGIGEKLDALEPFHPNRMADRILGMGDVLTLIEKAQAAFDASQAAEIRKKLKSA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT---PAQVREAEKSLKIMEAMIEAMTP 297
+F+ +DF+ Q R +MG + +++GMIPGM ++T ++ EK L + EA+I +MTP
Sbjct: 326 DFNLDDFVAQLRQFKKMGPLDQIMGMIPGMDRMTKKMKGAMQFDEKELVVAEAIINSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER PE + S RR+R+A+ SG Q V++L+ Q Q R K
Sbjct: 386 WERRNPERIDGS--RRRRIARGSGTNVQDVNRLLKQFDQTRKLFKQF 430
>gi|365877311|ref|ZP_09416816.1| signal recognition particle protein [Elizabethkingia anophelis Ag1]
gi|442587808|ref|ZP_21006622.1| signal recognition particle protein [Elizabethkingia anophelis R26]
gi|365755171|gb|EHM97105.1| signal recognition particle protein [Elizabethkingia anophelis Ag1]
gi|442562307|gb|ELR79528.1| signal recognition particle protein [Elizabethkingia anophelis R26]
Length = 454
Score = 333 bits (854), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 169/335 (50%), Positives = 238/335 (71%), Gaps = 5/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAI 59
MGG +E + +PT+IL+AGLQG GKTT S KLAN+LKK+ K+ +LVA DVYRPAAI
Sbjct: 86 MGG-TNEGLNLSEKPTIILIAGLQGSGKTTFSGKLANFLKKKKSKNPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +LG Q GVPVYT + P QI++ +E AK+ DV+I+DTAGRL ID+ MM+E+
Sbjct: 145 DQLKVLGGQTGVPVYTEEGNLNPVQISQNAIEFAKQNKHDVIIIDTAGRLAIDEEMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++V + + PTE L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL+++ V
Sbjct: 205 RNVHQSVKPTETLFVVDSMTGQDAVNTAKAFNDVLNYNGVVLTKLDGDTRGGAALTIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK + GE+ME L+ FYP+RMA RILGMGDV+S VE+AQE +E+A+++ KKI
Sbjct: 265 VEKPIKFISTGEKMEALDIFYPERMADRILGMGDVVSLVERAQEQFDEEEAKKLHKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFLKQ + + +MG+M ++GM+PG+GK V + + K +EA+I++MTPEE
Sbjct: 325 NEFGFDDFLKQIQQIKKMGNMKDLLGMLPGVGKAIK-DVDINDDAFKHIEAIIQSMTPEE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
R +P + S R++R+A+ +G+ + V+ L+ Q
Sbjct: 384 RRRPSTINMS--RKQRIAKGAGRKLEDVNALMKQF 416
>gi|387927062|ref|ZP_10129741.1| signal recognition particle protein [Bacillus methanolicus PB1]
gi|387589206|gb|EIJ81526.1| signal recognition particle protein [Bacillus methanolicus PB1]
Length = 450
Score = 333 bits (854), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 174/353 (49%), Positives = 256/353 (72%), Gaps = 4/353 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ + PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI
Sbjct: 87 MGGEQSKIAVSNRPPTVIMMVGLQGAGKTTTTGKLANLLRKKYNRKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IA+Q +E+AK+++ D V++DTAGRL +D+A+M EL
Sbjct: 147 KQLETLGKQLNIPVFSLGDQVSPVEIARQAVEKAKEEHHDYVLIDTAGRLHVDEALMAEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K++K + P E+ L+VDAMTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KEIKELAKPDEIFLIVDAMTGQDAVNVAQSFNEQLGLTGVVLTKLDGDTRGGAALSLRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK VG GE+M+ +EPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E++KKI +
Sbjct: 267 TQTPIKFVGLGEKMDAIEPFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEKKIRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
A+F +DFL+Q V +MG + ++ M+PG KI + EK + +EA+I++MT E
Sbjct: 327 ASFTLDDFLEQLGQVRKMGPLDELLKMMPGANKIKGLNNLTIDEKQIAHVEAIIKSMTKE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 351
E+ PE++ S RRKR+A+ SG T Q+V++L+ Q M+ MK + G+ + G
Sbjct: 387 EKIHPEIINAS--RRKRIAKGSGTTIQEVNRLLKQFEDMKKMMKQMAGMQQKG 437
>gi|373500244|ref|ZP_09590631.1| signal recognition particle protein [Prevotella micans F0438]
gi|371954375|gb|EHO72188.1| signal recognition particle protein [Prevotella micans F0438]
Length = 444
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 177/347 (51%), Positives = 241/347 (69%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAI 59
MGGE L +P VIL++GLQG GKTT S KLA +LKK + K+ MLVA DVYRPAAI
Sbjct: 86 MGGEAVGLKL-DGKPAVILMSGLQGSGKTTFSGKLAQFLKKKEHKNPMLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL ++G+QV V VY+ K ++IA+ ++EAK K D+VI+DTAGRL +D+ MM+E+
Sbjct: 145 EQLKVVGQQVNVSVYSEPENKKVNEIAENAIKEAKVKGNDLVIIDTAGRLAVDEEMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K ++P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 ESLKNHIHPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+ME L+ F+P RMA RILGMGDV+S VE+AQE +E+A+++QKKI
Sbjct: 265 VTKPIKFVGTGEKMEALDTFHPSRMADRILGMGDVVSLVERAQEQFDEEEAKKLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDF KQ + + +MG++ + MIPG+GK V + S K +EA+I++MTP+E
Sbjct: 325 NQFDFNDFYKQIQQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNSFKSVEAIIQSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R PELL S RR+R+A+ SG +V++L+ Q Q R MK + G
Sbjct: 384 RTNPELLNTS--RRQRIAKGSGTNILEVNRLIKQFDQTRKMMKMVTG 428
>gi|417917724|ref|ZP_12561283.1| signal recognition particle protein [Streptococcus parasanguinis
SK236]
gi|342830361|gb|EGU64700.1| signal recognition particle protein [Streptococcus parasanguinis
SK236]
Length = 523
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 167/353 (47%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E++ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV++ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFSLGTEVPAVEIVRQGLEQARANHNDYVLIDTAGRLQIDEKLMGEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDVKALAEPNEILLVVDAMIGQEAANVAREFNEQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+GRILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSGRILGMGDMLTLIEKASQEYDEKRSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ M+PGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NPAMKNLKVDEREIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GV+ G
Sbjct: 386 AERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|417886283|ref|ZP_12530430.1| signal recognition particle protein [Lactobacillus oris F0423]
gi|341593781|gb|EGS36606.1| signal recognition particle protein [Lactobacillus oris F0423]
Length = 480
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 171/362 (47%), Positives = 245/362 (67%), Gaps = 10/362 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L A PTVI++ GLQG GKTT + KLA LK + + M +A DVYRPAAI
Sbjct: 87 MGEEAVPLNKAAHIPTVIMMVGLQGAGKTTTAGKLALRLKNEDHARPMFIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL + +Q+ VPV+ GT+V P +I ++G+E AK+ + D VI+DTAGRLQID+ +MDEL
Sbjct: 147 TQLQQVADQIDVPVFEKGTDVDPVEIVREGMEVAKQNHNDYVIIDTAGRLQIDEQLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++K ++NP E+LLV+D+MTGQ A F+ ++ ITG ILTKLDGD+RGGAA+S++ V
Sbjct: 207 ANIKELVNPDEILLVIDSMTGQNAVNTAQGFDDKLDITGVILTKLDGDTRGGAAMSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG GE+M DL+ F+PDRMA RILGMGD+++ +EKAQ+ +E A+E K+
Sbjct: 267 TGKPIKFVGEGEKMADLDVFHPDRMASRILGMGDMMTLIEKAQKNFDEEQAQETMDKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FD+NDFL Q V +MG + ++ M+PGM PA + K ++A++ +MTP
Sbjct: 327 NTFDYNDFLAQMDQVTKMGPLENILKMMPGMAN-NPALKNINIDPKQFAHIKAIVLSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
EERE P+L+ +P RR+R+A +G+ +V++++ Q QMR MK + G++ +
Sbjct: 386 EERENPDLM--NPSRRRRLAAGAGRPIVEVNRMIKQFNQMRKMMKQV----TNGNMSGMQ 439
Query: 358 NL 359
NL
Sbjct: 440 NL 441
>gi|422412452|ref|ZP_16489411.1| signal recognition particle protein, partial [Listeria innocua FSL
S4-378]
gi|313619619|gb|EFR91265.1| signal recognition particle protein [Listeria innocua FSL S4-378]
Length = 363
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 170/345 (49%), Positives = 247/345 (71%), Gaps = 4/345 (1%)
Query: 2 GGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAID 60
GGE S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI
Sbjct: 1 GGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAIK 60
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LG+Q+ +PV++ G +V P +IAKQ + +AK++++D VI+DTAGRL ID+ +MDELK
Sbjct: 61 QLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEEHLDYVIIDTAGRLHIDETLMDELK 120
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
VK + PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V+
Sbjct: 121 QVKEIATPTEILLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSVT 180
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK V GE+ME +E F+PDRMA RILGMGDVLS +EKAQ + E + M++K+
Sbjct: 181 GKPIKFVATGEKMEAIETFHPDRMASRILGMGDVLSLIEKAQTDVDAEKMKAMEQKMKDN 240
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEE 299
+ +DFL Q + V +MG + ++ M+PG K+ ++ +K L +EA+I++MT E
Sbjct: 241 SMTLDDFLDQLQQVKQMGPLDELLKMMPGANKMKGLDNMQVDDKQLGHIEAIIKSMTKNE 300
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
++ P+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 301 KDNPDIINAS--RRKRIARGSGRPIQEINRLLKQFAEMKKMMKQM 343
>gi|341821055|emb|CCC57389.1| signal recognition particle protein Ffh [Weissella thailandensis
fsh4-2]
Length = 485
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 177/354 (50%), Positives = 238/354 (67%), Gaps = 9/354 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MG EL + PTVI++ GLQG GKTT + KLA LK +Q +++A DVYRPAAI
Sbjct: 87 MGESAVELNKSPKIPTVIMMVGLQGAGKTTTAGKLALKLKNEQNARPLMIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LGEQ+ VPV+ GT+V P I K G+E+A + D V +D AGRLQID+ +M EL
Sbjct: 147 DQLKSLGEQIDVPVFDMGTDVNPRDIVKAGMEKAAELKSDYVFIDAAGRLQIDEELMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + P E++LVVDAMTGQ A FN + ITG +LTKLDGD+RGGAALS++ V
Sbjct: 207 ADVKDIAQPDEIMLVVDAMTGQNAVETAEGFNNRLDITGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG+GE+M DL+ FYPDRMA RILGMGD+L+ +EKAQ+ ++ A E +K+ S
Sbjct: 267 TGKPIKFVGQGEKMTDLDIFYPDRMASRILGMGDLLTLIEKAQKDYDEKQANETMEKMKS 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q + MGSM ++ MIPGM PA + K + + A++ +MTP
Sbjct: 327 NTFDFNDFIDQMDQLQNMGSMEDIMKMIPGMAN-NPALKNAKIDPKDMAHIRAIVMSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 351
EERE P++L +P R++R+A +G+ +V+++V Q QM+ K + GVM G
Sbjct: 386 EERENPDVL--NPSRKRRLAAGAGRPVVEVNRMVKQFNQMK---KMMSGVMNGN 434
>gi|119357327|ref|YP_911971.1| signal recognition particle subunit FFH/SRP54 (srp54) [Chlorobium
phaeobacteroides DSM 266]
gi|119354676|gb|ABL65547.1| signal recognition particle subunit FFH/SRP54 (srp54) [Chlorobium
phaeobacteroides DSM 266]
Length = 449
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 181/360 (50%), Positives = 240/360 (66%), Gaps = 5/360 (1%)
Query: 1 MGGEVSELVFA-KSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAI 59
MGGE L + K P +I++AGLQG GKTT AKLA LKK GK+ MLVA DVYRPAA+
Sbjct: 86 MGGEHQPLNLSPKKLPAIIMVAGLQGSGKTTFCAKLAKRLKKNGKNPMLVAADVYRPAAV 145
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LGEQV VPV++ E + A +GLE A+ DVVI+DTAGRLQID+ MM E
Sbjct: 146 DQLRTLGEQVDVPVFSI-DEQDAMKAAVKGLEAARLAAKDVVIIDTAGRLQIDEKMMAEA 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K L P E+L VVD+M GQEA FN + G +LTKLDGD+RGGAALS+++V
Sbjct: 205 EALKHALKPDELLFVVDSMMGQEAVNTAKAFNDRLDFDGVVLTKLDGDARGGAALSIRQV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK + GE+++DL+ FYPDRMA RILGMGD++SFVEKAQE + E EMQKK+M
Sbjct: 265 VEKPIKFISVGEKVDDLDLFYPDRMAQRILGMGDIVSFVEKAQETLDLEKTLEMQKKLMK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FD NDF Q + + +MGS+ +I M+PG+ K+ P Q E K +EAMI +MT +E
Sbjct: 325 NEFDLNDFFDQLQQLKKMGSIQGLISMVPGLNKMVPKQEIE-NLDFKPIEAMINSMTKQE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 359
+ PE++ S RR+R+A+ SG Q+V+ L+ Q +M+ M+++ + + G NL
Sbjct: 384 KTNPEIINGS--RRQRIAKGSGTRVQEVNMLLKQFGEMKKMMRSVTKLSQSGRKITSQNL 441
>gi|312869933|ref|ZP_07730072.1| signal recognition particle protein [Lactobacillus oris PB013-T2-3]
gi|311094518|gb|EFQ52823.1| signal recognition particle protein [Lactobacillus oris PB013-T2-3]
Length = 480
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 171/362 (47%), Positives = 245/362 (67%), Gaps = 10/362 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L A PTVI++ GLQG GKTT + KLA LK + + M +A DVYRPAAI
Sbjct: 87 MGEEAVPLNKAAHIPTVIMMVGLQGAGKTTTAGKLALRLKNEDHARPMFIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL + +Q+ VPV+ GT+V P +I ++G+E AK+ + D VI+DTAGRLQID+ +MDEL
Sbjct: 147 TQLQQVADQIDVPVFEKGTDVDPVEIVREGMEVAKQNHNDYVIIDTAGRLQIDEQLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++K ++NP E+LLV+D+MTGQ A F+ ++ ITG ILTKLDGD+RGGAA+S++ V
Sbjct: 207 ANIKELVNPDEILLVIDSMTGQNAVNTAQGFDDKLDITGVILTKLDGDTRGGAAMSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG GE+M DL+ F+PDRMA RILGMGD+++ +EKAQ+ +E A+E K+
Sbjct: 267 TGKPIKFVGEGEKMADLDVFHPDRMASRILGMGDMMTLIEKAQKNFDEEQAQETMDKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FD+NDFL Q V +MG + ++ M+PGM PA + K ++A++ +MTP
Sbjct: 327 NTFDYNDFLAQMDQVTKMGPLENILKMMPGMAN-NPALKNINIDPKQFAHIKAIVLSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
EERE P+L+ +P RR+R+A +G+ +V++++ Q QMR MK + G++ +
Sbjct: 386 EERENPDLM--NPSRRRRLAAGAGRPIVEVNRMIKQFNQMRKMMKQV----TNGNMSGMQ 439
Query: 358 NL 359
NL
Sbjct: 440 NL 441
>gi|450105269|ref|ZP_21859781.1| signal recognition particle protein [Streptococcus mutans SF14]
gi|449224870|gb|EMC24494.1| signal recognition particle protein [Streptococcus mutans SF14]
Length = 516
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 168/353 (47%), Positives = 241/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRK 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
+FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++ +MTP
Sbjct: 327 NSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 386 AERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|153954026|ref|YP_001394791.1| hypothetical protein CKL_1401 [Clostridium kluyveri DSM 555]
gi|219854640|ref|YP_002471762.1| hypothetical protein CKR_1297 [Clostridium kluyveri NBRC 12016]
gi|146346907|gb|EDK33443.1| Hypothetical protein CKL_1401 [Clostridium kluyveri DSM 555]
gi|219568364|dbj|BAH06348.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 449
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 164/352 (46%), Positives = 246/352 (69%), Gaps = 2/352 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S + ++ T+I+L GLQG GKTT+ KLA L+K+ K +LVA D+YRPAAI
Sbjct: 87 MGNSESSIEYSPDGLTIIMLVGLQGSGKTTMCGKLALQLRKKNKKPLLVACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL I+G+Q+ +PV++ G +V+ I K + AK ++V+I+DTAGRLQID+ +MDELK
Sbjct: 147 QLQIVGKQIDIPVFSMGDKVEAVDICKGAVTYAKDNKLNVIIIDTAGRLQIDEELMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K +NP E+LLVVD+MTGQ+A + ++FN ++ I G +LTKLDGD+RGGAALS++ ++
Sbjct: 207 QIKENINPQEILLVVDSMTGQDAVNVASSFNEQLNINGVVLTKLDGDTRGGAALSIRAIT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GE+M DLE FYPDRMA RILGMGDVLS +EKAQ+ + +E+A+++ ++++
Sbjct: 267 GKPIKFVGMGEKMNDLEVFYPDRMASRILGMGDVLSLIEKAQQSIDEEEAKKLGDRMLNK 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPG--MGKITPAQVREAEKSLKIMEAMIEAMTPE 298
F+F DFL ++G +S++I M+PG M ++ + EK + +EA+I +MT +
Sbjct: 327 EFNFEDFLALMAQTKKLGPISKLIEMVPGVNMKELKGVDLSRGEKEMVKIEAIINSMTLK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ER KP +++ S R+KR+A SG Q V++L+ +++ MK G+ +G
Sbjct: 387 ERRKPSIVSGSSSRKKRIAAGSGTNIQTVNKLLKDFEKIKKTMKQFNGMKKG 438
>gi|403069213|ref|ZP_10910545.1| signal recognition particle protein [Oceanobacillus sp. Ndiop]
Length = 447
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 171/348 (49%), Positives = 246/348 (70%), Gaps = 8/348 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT + KLAN L KK +S +L A DVYRPAAI
Sbjct: 87 MGGEQSKIAVADRAPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRSPLLAACDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG Q+ +PV++ GTE P IA++ +E+AK+++ D VI+DTAGRL +D +MDEL
Sbjct: 147 TQLETLGGQLEMPVFSMGTEANPVDIAQKAVEKAKEEHHDYVIIDTAGRLHVDSDLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K + P E+ LVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS+K V
Sbjct: 207 QQIKASVKPDEIFLVVDSMTGQDAVNVAESFNEQLDITGVVLTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK G GE+++ LE F+P+RMA RILGMGDVLS +EKAQ + ++ +E+++K+ +
Sbjct: 267 TDKPIKFAGMGEKLDQLEAFHPERMASRILGMGDVLSLIEKAQSNVDEKQVKELEEKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK---ITPAQVREAEKSLKIMEAMIEAMT 296
+F F+DFL+Q V +MG + ++ MIPG K + AQ+ EK L +EA+I++MT
Sbjct: 327 MSFTFDDFLEQMGQVKKMGPLDDLMSMIPGANKMKGLKNAQLD--EKQLSQVEAIIQSMT 384
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER+ P ++ S RRKR+A+ SG + QV++L+ Q +M+ MK +
Sbjct: 385 KNERQDPAIINGS--RRKRIAKGSGTSVSQVNRLIKQFSEMKKMMKQM 430
>gi|153808568|ref|ZP_01961236.1| hypothetical protein BACCAC_02864 [Bacteroides caccae ATCC 43185]
gi|423219382|ref|ZP_17205878.1| signal recognition particle protein [Bacteroides caccae CL03T12C61]
gi|149128890|gb|EDM20107.1| signal recognition particle protein [Bacteroides caccae ATCC 43185]
gi|392625432|gb|EIY19498.1| signal recognition particle protein [Bacteroides caccae CL03T12C61]
Length = 440
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 173/343 (50%), Positives = 234/343 (68%), Gaps = 5/343 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE E V +RP VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI
Sbjct: 86 MGGETVE-VDIDARPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +L EQ+ VP+Y P +IA+ ++EAK K D+VIVDTAGRL +D+ MM+E+
Sbjct: 145 EQLRVLAEQIDVPMYCELESKNPVEIAQHAIQEAKAKGYDLVIVDTAGRLAVDEQMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 AAIKEAINPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAALSIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP E
Sbjct: 325 NQFDFNDFLSQIAQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPAE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
R PE+L S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 384 RSNPEILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|312866548|ref|ZP_07726763.1| signal recognition particle protein [Streptococcus parasanguinis
F0405]
gi|311097847|gb|EFQ56076.1| signal recognition particle protein [Streptococcus parasanguinis
F0405]
Length = 518
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 167/353 (47%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E++ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV++ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFSLGTEVPAVEIVRQGLEQARANHNDYVLIDTAGRLQIDEKLMGEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDVKALAEPNEILLVVDAMIGQEAANVAREFNEQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+GRILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSGRILGMGDMLTLIEKASQEYDEKRSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ M+PGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NPAMKNLKVDEREIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GV+ G
Sbjct: 386 AERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|160938805|ref|ZP_02086156.1| hypothetical protein CLOBOL_03699 [Clostridium bolteae ATCC
BAA-613]
gi|158437768|gb|EDP15528.1| hypothetical protein CLOBOL_03699 [Clostridium bolteae ATCC
BAA-613]
Length = 458
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 173/346 (50%), Positives = 247/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRP-TVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAI 59
MG E +E+ S ++I++AGLQG GKTT +AK+A +K +G+ +L A D+YRPAAI
Sbjct: 87 MGSETTEISLKPSNEISIIMMAGLQGAGKTTTTAKIAAKMKAKGRKPLLAACDIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL I G++VG+PV++ G + KP IAK LE A K ++VVI+DTAGRL ID+ MMDEL
Sbjct: 147 EQLQINGDRVGIPVFSMGNKNKPVDIAKAALEHASKNGLNVVILDTAGRLHIDETMMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++K L+ + +LVVDAMTGQ+A + TFN +IGI G ILTKLDGD+RGGAALS++ V
Sbjct: 207 VEIKDNLDVCQTILVVDAMTGQDAVNVAGTFNDKIGIDGVILTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPI VG GE++ DLE FYPDRMA RILGMGD+ S +EKA + +E A+E+ +K+
Sbjct: 267 TGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDIQSLIEKAAAEVDEEQAKELSQKLRK 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIEAMTPE 298
A FD+NDFL Q + + +MG M ++ M+PGMG +++ + E EKS+ +E++I +MT E
Sbjct: 327 AEFDYNDFLTQMQQIKKMGGMGSILSMMPGMGNQLSGVDMDEGEKSMHRVESIILSMTKE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P L+ +P R++R+A+ +G +V++LV Q QM+ MK +
Sbjct: 387 ERANPNLI--NPSRKQRIAKGAGVEVSEVNRLVKQFDQMKKMMKQM 430
>gi|116618655|ref|YP_819026.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
gi|116097502|gb|ABJ62653.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
Length = 491
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 171/345 (49%), Positives = 234/345 (67%), Gaps = 6/345 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L + PT+I++AGLQG GKTT AKLA LK + + +L+A D+YRPAAI
Sbjct: 87 MGEEAVPLNKSPKIPTIIMMAGLQGAGKTTTVAKLAYKLKNENNARPLLIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ILG + +PV++ GT+V P I + GLE+A + D V +DTAGRLQID+ +M EL
Sbjct: 147 DQLEILGRDLDIPVFSMGTDVNPRDIVRAGLEKAAENKNDYVFIDTAGRLQIDEELMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
KD+ + +P E+LL VDAMTGQ AA F+ + +TG +LTKLDGD+RGGAALS+++V
Sbjct: 207 KDIAEIADPDEILLTVDAMTGQNAAETAKGFSASLDLTGVVLTKLDGDTRGGAALSIRDV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG+GE+ DL+ FYPDRMA RILGMGDVL+ +EKAQ +E+ + +K+
Sbjct: 267 TGKPIKFVGQGEKPTDLDVFYPDRMASRILGMGDVLTLIEKAQRDFDEEEQTKQLEKMRQ 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q + V MG M ++ MIPGM P A V K +EA++ +MTP
Sbjct: 327 NTFDFNDFVAQLKQVQSMGPMEDLLKMIPGMAN-NPALANVNLDAKQFAHLEAIVGSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
EERE P+L+ +P RR+R+A +G+ +V++++ Q QMR M
Sbjct: 386 EERENPDLI--NPSRRRRLAAGAGRPIVEVNRMIKQFDQMRKMMN 428
>gi|429741355|ref|ZP_19275017.1| signal recognition particle protein [Porphyromonas catoniae F0037]
gi|429159004|gb|EKY01528.1| signal recognition particle protein [Porphyromonas catoniae F0037]
Length = 447
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 175/360 (48%), Positives = 242/360 (67%), Gaps = 6/360 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MG + +E+ K P +IL++GLQG GKTT S KLA+ LK KQ K +LVA DVYRPAAI
Sbjct: 86 MGSKATEINL-KGTPAIILMSGLQGSGKTTFSGKLAHLLKTKQSKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +L EQ+ VPVY P IA++G+ EA + DVVI+DTAGRL ID+ MM E+
Sbjct: 145 EQLRVLAEQIAVPVYFDLESKDPVSIARRGVAEAMTQGCDVVIIDTAGRLAIDEEMMHEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ VK + P+E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 QAVKEAIRPSETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+M+ L+ F+P+RMA RILGMGD++S VE+AQ++ +++A ++++I
Sbjct: 265 VDKPIKFVGMGEKMDALDVFHPERMADRILGMGDIVSLVERAQQLYDEQEARRLEERIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTPEE
Sbjct: 325 DQFDFNDFLTQIHQIKKMGNIKDLAAMIPGVGKAL-KDIDINDDAFKSIEAIIYSMTPEE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 359
R KP +L RRKR+A SG T Q V++L+ Q Q R MK L G +GG +P + ++
Sbjct: 384 RAKPHILDGH--RRKRIALGSGTTVQDVNKLLTQFTQTRKMMKTLQG-FKGGKMPKIPSM 440
>gi|154483576|ref|ZP_02026024.1| hypothetical protein EUBVEN_01280 [Eubacterium ventriosum ATCC
27560]
gi|149735486|gb|EDM51372.1| signal recognition particle protein [Eubacterium ventriosum ATCC
27560]
Length = 452
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 172/349 (49%), Positives = 248/349 (71%), Gaps = 3/349 (0%)
Query: 1 MGGEVSEL-VFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAI 59
MG E +EL + ++ TVI++ GLQG GKTT +AK+A LK +GK +LVA DVYRPAAI
Sbjct: 89 MGSETTELKILPDNQITVIMMMGLQGAGKTTTTAKIAGKLKAKGKRPLLVACDVYRPAAI 148
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL I GE+ VPV++ G + KP IAK +E AKK N +VVI+DTAGRL +D+ MM+EL
Sbjct: 149 EQLKINGEKQQVPVFSMGDKQKPLNIAKAAIEHAKKNNNNVVILDTAGRLHVDEDMMNEL 208
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+++ + T+ +LVVDAMTGQ+A + FN +IGI G I+TKLDGD+RGGAALS+K +
Sbjct: 209 VEIRDNIELTQTVLVVDAMTGQDAVNVAKEFNEKIGIDGIIVTKLDGDTRGGAALSIKAI 268
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPI +G GE++ DLE F+PDRMA RILGMGDVLS +EKA++ + Q+ A+EM++++
Sbjct: 269 TGKPILYIGMGEKLSDLEQFHPDRMASRILGMGDVLSLIEKAEQSIDQDKAKEMEQRLKK 328
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
A F F+D+L+ + MG +S ++ M+PG+G + EK L +EA+I +MT EE
Sbjct: 329 AQFTFDDYLEYMGQIKNMGGLSSLLSMMPGVGGKINDDMLPDEKQLGKIEAIIYSMTKEE 388
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 348
R P+++ +P R++R+A+ +G QV++LV Q Q R MK++ G+M
Sbjct: 389 RSNPDVI--NPSRKQRIAKGAGVDISQVNKLVKQFEQARKMMKSMPGLM 435
>gi|417837347|ref|ZP_12483586.1| signal recognition particle, subunit Ffh SRP54 [Lactobacillus
johnsonii pf01]
gi|338762542|gb|EGP13810.1| signal recognition particle, subunit Ffh SRP54 [Lactobacillus
johnsonii pf01]
Length = 476
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 174/362 (48%), Positives = 247/362 (68%), Gaps = 11/362 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L + PT+I++ GLQG GKTT KLANYL K K+ +L+AGD+YRPAAI
Sbjct: 87 MGEETVSLNKSPHIPTIIMMVGLQGTGKTTTVGKLANYLMKNEKARPLLIAGDIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ VPVY+ + ++I K GLEEA K D V++DTAGRL+ID+ +MDEL
Sbjct: 147 EQLKQIGQQLDVPVYSEDNQ-DVAEIVKHGLEEADKNKNDYVLIDTAGRLEIDEQLMDEL 205
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K V V +P LLVVDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAALS++ V
Sbjct: 206 KRVTEVAHPDNTLLVVDAMTGQAATQVAEGFNNDLDLTGIVLTKLDGDTRGGAALSIRAV 265
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PI G+GE++ DL F+PDRMA RILGMGD+L+ +EKAQ+ ++AE+M +K+
Sbjct: 266 TGLPIIFTGQGEKLTDLSTFHPDRMASRILGMGDMLTLIEKAQQDYDAKEAEKMAEKMRE 325
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V +MG + ++I MIPG+G PA ++ EK + ++A++ +MTP
Sbjct: 326 NTFDFNDFIDQMEQVQKMGPLDQIIKMIPGLGN-NPALKNIQIPEKQIDHIKAIVYSMTP 384
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
EERE P++L +P RR+R+A SG++ +V++++ Q Q K +M M G + L+
Sbjct: 385 EERENPDIL--NPSRRRRIAAGSGRSIAEVNRMIKQFKQ----SKEMMQKMTKGDMGELA 438
Query: 358 NL 359
NL
Sbjct: 439 NL 440
>gi|307565825|ref|ZP_07628286.1| signal recognition particle protein [Prevotella amnii CRIS 21A-A]
gi|307345449|gb|EFN90825.1| signal recognition particle protein [Prevotella amnii CRIS 21A-A]
Length = 456
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 176/368 (47%), Positives = 246/368 (66%), Gaps = 11/368 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE + ++RP +IL++GLQG GKTT + KLA LK K K +LVA DVYRPAAI
Sbjct: 86 MGGEAVGMSL-ENRPAIILMSGLQGSGKTTFAGKLAKMLKTKNHKQPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ++GEQV VPVY+ ++IA + EAK K DV+I+DTAGRL +D+ MM+E+
Sbjct: 145 DQLKVVGEQVDVPVYSEAGNKNVNEIATHAIAEAKSKGNDVIIIDTAGRLAVDEDMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K + P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 ESLKNHITPDETLFVVDSMTGQDAVNTAKEFNSRLDFDGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+M+ ++ F+P+RMA RILGMGDV+S VE+AQE +E+A+ +QKKI
Sbjct: 265 VTKPIKFIGTGEKMDAIDVFHPERMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP+E
Sbjct: 325 NKFDFNDFYNQIQQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIEAIIQSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG------SL 353
R PE+L + +RR+R+A+ SG Q+V++L+ Q Q R MK + G G SL
Sbjct: 384 RTNPEIL--NNIRRRRIAKGSGTDIQEVNRLLKQFDQTRKMMKMVTGSKMAGMMSRMKSL 441
Query: 354 PALSNLED 361
+SN+ D
Sbjct: 442 KNMSNMPD 449
>gi|227872399|ref|ZP_03990746.1| signal recognition particle protein Ffh [Oribacterium sinus F0268]
gi|227841759|gb|EEJ52042.1| signal recognition particle protein Ffh [Oribacterium sinus F0268]
Length = 459
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 172/363 (47%), Positives = 254/363 (69%), Gaps = 12/363 (3%)
Query: 1 MGGEVSELVFAKSRP----TVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRP 56
MG E +EL K RP TV+++ GLQG GKTT +AKLA +KQ + +LVA D+YRP
Sbjct: 87 MGEENTEL---KLRPQSEITVLMMVGLQGAGKTTTAAKLAGKFQKQHRKPLLVACDIYRP 143
Query: 57 AAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMM 116
AAI+QL + E++ +P ++ G +VKP +IAK+ EEAK K +++I+DTAGRLQID A+M
Sbjct: 144 AAIEQLRVNAEKLSIPFFSLGNQVKPEEIAKKAYEEAKAKGYNLLILDTAGRLQIDDALM 203
Query: 117 DELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSV 176
+ELK +K + +L VDAMTGQEA + +F+ E+G+ G IL+K DGD+RGGAALS+
Sbjct: 204 EELKRMKSAVPVDWTILTVDAMTGQEAVNVAESFSKEVGVNGVILSKCDGDTRGGAALSI 263
Query: 177 KEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKK 236
K ++G+PI +G GE++ DLEPFYPDRMAGRILGMGDVLS +EKAQ M +E A+E +K
Sbjct: 264 KAMTGQPILYLGMGEKLSDLEPFYPDRMAGRILGMGDVLSLIEKAQSEMDEEKAKESVRK 323
Query: 237 IMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK-ITPAQVREAEKSLKIMEAMIEAM 295
+ F+++DFL Q + ++G ++ ++ M+PGM K + + ++EK +K +++MI++M
Sbjct: 324 LSKGQFNYDDFLDQMNQLQKLGGIAGILKMLPGMNKAMQGIDLEDSEKKMKQVKSMIQSM 383
Query: 296 TPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG--GSL 353
T +ER P+L+ +P R+KR+AQ +G +V++LV Q +M+ MK G M+G G
Sbjct: 384 TFKERANPKLM--NPSRKKRIAQGAGVDIAEVNKLVKQFEEMQKMMKQFGGSMKGKHGGF 441
Query: 354 PAL 356
P +
Sbjct: 442 PGM 444
>gi|325297211|ref|YP_004257128.1| signal recognition particle protein [Bacteroides salanitronis DSM
18170]
gi|324316764|gb|ADY34655.1| signal recognition particle protein [Bacteroides salanitronis DSM
18170]
Length = 441
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 175/343 (51%), Positives = 234/343 (68%), Gaps = 5/343 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG+ EL K RP VIL++GLQG GKTT S KLA K K+ + +LVA DVYRPAAI
Sbjct: 86 MGGDTIELDL-KGRPAVILMSGLQGSGKTTFSGKLARMFKTKKNRKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +LG QV VPVY+ P QIAK ++EAK K D+VIVDTAGRL +D+ MM+E+
Sbjct: 145 EQLKVLGTQVEVPVYSEPESKDPVQIAKNAIQEAKAKGYDLVIVDTAGRLAVDEQMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K + P L VVDAMTGQ+A FN + TG +LTKLDGD+RGGAALS++ V
Sbjct: 205 ETIKNAITPDATLFVVDAMTGQDAVNTAREFNERLDFTGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPI VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VNKPILFVGTGEKLDAVDLFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTPEE
Sbjct: 325 NQFDFNDFLSQIHQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPEE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
R +PE+L S RR R+A+ SG + Q+V++L+ Q Q R MK
Sbjct: 384 RTRPEILNGS--RRNRIAKGSGTSIQEVNRLLKQFDQTRKMMK 424
>gi|339641142|ref|ZP_08662586.1| signal recognition particle protein [Streptococcus sp. oral taxon
056 str. F0418]
gi|339454411|gb|EGP67026.1| signal recognition particle protein [Streptococcus sp. oral taxon
056 str. F0418]
Length = 524
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/386 (45%), Positives = 254/386 (65%), Gaps = 26/386 (6%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + PT+I++ GLQG GKTT + KLA+ LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLAHKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGL +AK + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLGQAKANHNDYVLIDTAGRLQIDEKLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 SDVKALANPNEILLVVDAMIGQEAANVAREFNSQLEMTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M +I M+PGM PA + E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQGMGPMEDLIKMLPGMAS-NPALKNFKVDEREIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM-GVME------- 349
EERE P+LL +P RR+R+A SG + V++ + Q + M+ ++ G M
Sbjct: 386 EERENPDLL--TPSRRRRIANGSGNSFVDVNKFIKDFNQSKQLMQGVLSGDMSKMMKQMG 443
Query: 350 ------------GGSLPALSNLEDAL 363
GG++P +S L+D +
Sbjct: 444 LNPNNMPKNMPGGGAMPDMSALQDMM 469
>gi|406673308|ref|ZP_11080531.1| signal recognition particle protein [Bergeyella zoohelcum CCUG
30536]
gi|405586494|gb|EKB60254.1| signal recognition particle protein [Bergeyella zoohelcum CCUG
30536]
Length = 454
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 170/335 (50%), Positives = 234/335 (69%), Gaps = 5/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG E + +P+VIL+AGLQG GKTT S KLA++LK K+ K +LVA DVYRPAAI
Sbjct: 86 MGG-TQEGINLSGKPSVILIAGLQGSGKTTFSGKLAHFLKTKKNKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +LGEQ+ VPVYT PS IA+ + AK + DVVIVDTAGRL +D+ MM+E+
Sbjct: 145 EQLKVLGEQIQVPVYTEEGSNNPSTIAENAVNYAKHNSFDVVIVDTAGRLAVDEQMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K V ++P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL+++ V
Sbjct: 205 KTVHHFIHPNETLFVVDSMTGQDAVNTAKAFNDALNFDGVVLTKLDGDTRGGAALTIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK + GE+ME L+ FYP+RMA RILGMGDV+S VE+AQE +E+A+++ KKI
Sbjct: 265 VEKPIKFISTGEKMEALDLFYPERMADRILGMGDVISLVERAQEQFDEEEAKKLHKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFL+Q + + RMG+M ++GMIPG+GK V + + K +EA+I++MTPEE
Sbjct: 325 NEFGFDDFLQQIQQIKRMGNMKDLMGMIPGVGKAI-KDVDINDDAFKHIEAIIQSMTPEE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
R KP ++ + R+ R+A+ +G+ + V+QL+ Q
Sbjct: 384 RRKPSII--NTQRKNRIAKGAGRKIEDVNQLMKQF 416
>gi|415886545|ref|ZP_11548325.1| Signal recognition particle GTPase [Bacillus methanolicus MGA3]
gi|387587232|gb|EIJ79555.1| Signal recognition particle GTPase [Bacillus methanolicus MGA3]
Length = 450
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/353 (49%), Positives = 255/353 (72%), Gaps = 4/353 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ + PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI
Sbjct: 87 MGGEQSKIAVSNRPPTVIMMVGLQGAGKTTTTGKLANLLRKKYNRKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IA+Q + +AK+++ D V++DTAGRL +D+A+M EL
Sbjct: 147 KQLETLGKQLNIPVFSLGDQVSPVEIARQAIAKAKEEHHDYVLIDTAGRLHVDEALMAEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K++K + P E+ LVVDAMTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V
Sbjct: 207 KEMKEIAKPDEIFLVVDAMTGQDAVNVAQSFNEQLGLTGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK VG GE+M+ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E++KK +
Sbjct: 267 TQTPIKFVGLGEKMDALEPFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEKKFRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPE 298
A+F +DFL+Q V +MG + ++ M+PG KI + EK + +EA+I++MT E
Sbjct: 327 ASFTLDDFLEQLGQVRKMGPLEELLKMMPGANKIKGLNNLTIDEKQIAHVEAIIKSMTKE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 351
E+ PE++ S RRKR+A+ SG T Q+V++L+ Q +M+ MK + G+ + G
Sbjct: 387 EKIHPEIINAS--RRKRIAKGSGTTIQEVNRLLKQFEEMKKMMKQMTGMQQKG 437
>gi|227432057|ref|ZP_03914071.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
gi|227352174|gb|EEJ42386.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
Length = 491
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 171/345 (49%), Positives = 234/345 (67%), Gaps = 6/345 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L + PT+I++AGLQG GKTT AKLA LK + + +L+A D+YRPAAI
Sbjct: 87 MGEEAVPLNKSPKIPTIIMMAGLQGAGKTTTVAKLAYKLKNENNARPLLIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ILG + +PV++ GT+V P I + GLE+A + D V +DTAGRLQID+ +M EL
Sbjct: 147 DQLEILGRDLDIPVFSMGTDVNPRDIVRAGLEKAAENKNDYVFIDTAGRLQIDEELMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
KD+ + +P E+LL VDAMTGQ AA F+ + +TG +LTKLDGD+RGGAALS+++V
Sbjct: 207 KDIAEIADPDEILLTVDAMTGQNAAETAKGFSASLDLTGVVLTKLDGDTRGGAALSIRDV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG+GE+ DL+ FYPDRMA RILGMGDVL+ +EKAQ +E+ + +K+
Sbjct: 267 TGKPIKFVGQGEKPTDLDVFYPDRMASRILGMGDVLTLIEKAQRDFDEEEQTKQLEKMRQ 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q + V MG M ++ MIPGM P A V K +EA++ +MTP
Sbjct: 327 NTFDFNDFVAQLKQVQSMGPMEDLLKMIPGMAN-NPALANVNLDAKQFAHLEAIVGSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
EERE P+L+ +P RR+R+A +G+ +V++++ Q QMR M
Sbjct: 386 EERENPDLI--NPSRRRRLAAGAGRPIVEVNRMIKQFDQMRKMMN 428
>gi|407795762|ref|ZP_11142720.1| signal recognition particle protein [Salimicrobium sp. MJ3]
gi|407020103|gb|EKE32817.1| signal recognition particle protein [Salimicrobium sp. MJ3]
Length = 446
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 170/346 (49%), Positives = 244/346 (70%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAI 59
MGG+ S + AK PTVI++ GLQG GKTT + KLAN L+K + ML A DVYRPAAI
Sbjct: 87 MGGDESRIAVAKKPPTVIMMVGLQGAGKTTTAGKLANLLRKSYNRKPMLAAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ PVY+ GT+ P IA+Q +EEAK++N D +I+DTAGRL ID +M EL
Sbjct: 147 DQLETIGKQLDFPVYSEGTDADPVDIARQAVEEAKEQNHDYLIIDTAGRLHIDGELMGEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK +NP E+ LVVDAMTGQ+A + +F+ ++ I+G +LTKLDGD+RGGAALS+K V
Sbjct: 207 GRVKEAVNPDEIFLVVDAMTGQDAVNVAESFDEQLDISGVLLTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG GE+++ LE F+P+RMA RILGMGD+LS +EKA+ + ++ A+E++ K+ +
Sbjct: 267 TGKPIKFVGMGEKLDALEVFHPERMASRILGMGDMLSLIEKAETQVDEKQAKELEAKMRN 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
A+F F+DFL+Q V MG + +I MIPG K+ + +K + +EA+I++MT +
Sbjct: 327 ASFTFDDFLEQMAQVKNMGPLDEIIEMIPGASKMKGLKNASFDDKQIVHVEAIIQSMTKK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P ++ S R+KR+A+ SG + +V++L+ Q +M+ MK
Sbjct: 387 ERNDPSVMNAS--RKKRIAKGSGTSVSEVNRLLKQFNEMKKMMKQF 430
>gi|403386852|ref|ZP_10928909.1| signal recognition particle protein [Clostridium sp. JC122]
Length = 453
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 161/335 (48%), Positives = 235/335 (70%), Gaps = 2/335 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S+L + +VI+L GLQG GKTT++ KLA L+K K +LVA DVYRPAAI
Sbjct: 87 MGNTESKLELNPNGISVIMLVGLQGAGKTTMAGKLALNLRKNNKKPLLVACDVYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G+ + +PV+T G + P IAK +E AK + +VVI+DTAGRL ID+ +M+ELK
Sbjct: 147 QLQVVGKSIDIPVFTMGDKTSPVDIAKASIEHAKNEGCNVVIIDTAGRLHIDEELMNELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K + P E+LLVVD+MTGQ+A + +FN ++ +TG ILTKLDGD+RGGAALS+K ++
Sbjct: 207 DIKENIVPNEILLVVDSMTGQDAVNVAESFNSQLDLTGVILTKLDGDTRGGAALSIKAMT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GE+M DLE F+P+RM+ RILGMGD+LS +EKAQ + +E A+E+ K++S
Sbjct: 267 GKPIKYVGMGEKMSDLEIFHPERMSSRILGMGDMLSLIEKAQAAIDEEKAQELGNKMLSQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPE 298
F+F DFL + ++G + +++ M+PG ++ + + EK + +E++I +MT
Sbjct: 327 EFNFEDFLDMLHQMKKLGPLGKIVEMLPGANSKELKDLDLSQGEKEMSKIESIINSMTLN 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 333
ER KP L+ SP R+KR+A +G T Q+V++L+
Sbjct: 387 ERRKPSLITSSPSRKKRIANGAGTTIQEVNKLLKH 421
>gi|288905279|ref|YP_003430501.1| signal recognition particle protein [Streptococcus gallolyticus
UCN34]
gi|288732005|emb|CBI13570.1| signal recognition particle protein [Streptococcus gallolyticus
UCN34]
Length = 521
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 169/353 (47%), Positives = 241/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +EL + PT+I++ GLQG GKTT + KLAN L K + +++A D+YRPAAI
Sbjct: 87 LGSETAELEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKDENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG Q+ VPV+ GT+ +I GL +AK+ + D VI+DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGNQINVPVFDMGTDHSAVEIVTNGLAQAKENHNDYVIIDTAGRLQIDEKLMEEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + NP E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E+
Sbjct: 207 RDVKALANPNEILLVVDSMIGQEAANVADEFNKQLDITGVVLTKIDGDTRGGAALSIREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA + EK++ A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALKNFKVDEKAVARKRAIVLSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|333377126|ref|ZP_08468862.1| signal recognition particle protein [Dysgonomonas mossii DSM 22836]
gi|332886339|gb|EGK06583.1| signal recognition particle protein [Dysgonomonas mossii DSM 22836]
Length = 439
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/339 (51%), Positives = 235/339 (69%), Gaps = 5/339 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG ++ V K P VIL++GLQG GKTT S KLA LK K+GK+ +LVAGDVYRPAAI
Sbjct: 86 MGGTATD-VHLKGNPAVILMSGLQGSGKTTFSGKLAKMLKSKKGKNPLLVAGDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL ILGEQ+ VPVY P QIA+ ++ AK+ D+VIVDTAGRL ID+ MM E+
Sbjct: 145 EQLKILGEQIEVPVYWEEGSKNPVQIAQNAIKHAKQNGNDLVIVDTAGRLAIDEEMMKEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K + P E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 TAIKDAVKPDEILFVVDSMTGQDAVNTAKEFNDRLNFDGVVLTKLDGDTRGGAALSIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+M+ L+ F+P+RMA RILGMGD++S VE+AQE +E+A +QKKI
Sbjct: 265 VDKPIKFVGTGEKMDALDVFHPERMADRILGMGDIVSLVERAQEQYDEEEARRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDF+ Q + + +MG++ + MIPG+GK + + + K +EA+I +MTP+E
Sbjct: 325 NQFDFNDFIGQIQQIKKMGNLKDLASMIPGVGKAIK-DMDIDDDAFKSIEAIIYSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 338
R PE+L S RR+R+A+ SG + Q+V++L+ Q Q R
Sbjct: 384 RSTPEILNGS--RRERIAKGSGTSIQEVNKLIKQFDQTR 420
>gi|363894773|ref|ZP_09321839.1| signal recognition particle protein [Eubacteriaceae bacterium
ACC19a]
gi|361961465|gb|EHL14664.1| signal recognition particle protein [Eubacteriaceae bacterium
ACC19a]
Length = 444
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 173/350 (49%), Positives = 239/350 (68%), Gaps = 3/350 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S+L + PTVIL++GLQG GKTT + KLA+ LK+QGK+ MLVA DVYRPAA+
Sbjct: 87 MGGVQSKLNISSKPPTVILMSGLQGAGKTTTTGKLAHNLKQQGKNPMLVACDVYRPAAVK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL IL ++VG Y+ P QIA + EAK D+VI+DTAGRL ID+ +MDELK
Sbjct: 147 QLEILADKVGAKFYSEENNNNPVQIATNAVAEAKTLGFDIVIIDTAGRLHIDEELMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + P E+LLVVDAMTGQ+A +V TF+ +GI G IL+KLDGD+RGGAALS++ V+
Sbjct: 207 NIKSSVKPHEILLVVDAMTGQDAVNIVKTFDEALGIDGVILSKLDGDTRGGAALSIRAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK GE++ DLEPFYPDRMA RILGMGDVLS +EKAQ + + + + K+ +
Sbjct: 267 DKPIKFSATGEKIGDLEPFYPDRMANRILGMGDVLSLIEKAQSSVDMDAIKGLDSKMKNM 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
+F+F+DFL Q + + +MGS+ +I MIPG+ K + +K L +EA+I++MT +ER
Sbjct: 327 DFNFDDFLLQMQQIKKMGSLKSLIEMIPGLSK-QMKNIDVDDKELVKIEAIIQSMTKQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
P ++ S R+ R+A+ SG QV++L+ Q + R MK + +G
Sbjct: 386 ANPSIINGS--RKLRIAKGSGMQVNQVNRLLKQFEETRKMMKQMSTFTKG 433
>gi|381337033|ref|YP_005174808.1| signal recognition particle protein [Leuconostoc mesenteroides
subsp. mesenteroides J18]
gi|356644999|gb|AET30842.1| signal recognition particle protein [Leuconostoc mesenteroides
subsp. mesenteroides J18]
Length = 491
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 171/345 (49%), Positives = 233/345 (67%), Gaps = 6/345 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L + PT+I++AGLQG GKTT AKLA LK + + +L+A D+YRPAAI
Sbjct: 87 MGEEAVPLNKSPKIPTIIMMAGLQGAGKTTTVAKLAYKLKNENNARPLLIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ILG + +PV+ GT+V P I + GLE+A + D V +DTAGRLQID+ +M EL
Sbjct: 147 DQLEILGRDLDIPVFAMGTDVNPRDIVRAGLEKAAENKNDYVFIDTAGRLQIDEELMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
KD+ + +P E+LL VDAMTGQ AA F+ + +TG +LTKLDGD+RGGAALS+++V
Sbjct: 207 KDIAEIADPDEILLTVDAMTGQNAAETAKGFSASLDLTGVVLTKLDGDTRGGAALSIRDV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG+GE+ DL+ FYPDRMA RILGMGDVL+ +EKAQ +E+ + +K+
Sbjct: 267 TGKPIKFVGQGEKPTDLDVFYPDRMASRILGMGDVLTLIEKAQRDFDEEEQTKQLEKMRQ 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q + V MG M ++ MIPGM P A V K +EA++ +MTP
Sbjct: 327 NTFDFNDFVAQLKQVQSMGPMEDLLKMIPGMAN-NPALANVNLNAKQFAHLEAIVGSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
EERE P+L+ +P RR+R+A +G+ +V++++ Q QMR M
Sbjct: 386 EERENPDLI--NPSRRRRLAAGAGRPIVEVNRMIKQFDQMRKMMN 428
>gi|429724972|ref|ZP_19259833.1| signal recognition particle protein [Prevotella sp. oral taxon 473
str. F0040]
gi|429151434|gb|EKX94302.1| signal recognition particle protein [Prevotella sp. oral taxon 473
str. F0040]
Length = 448
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 176/347 (50%), Positives = 240/347 (69%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE ++L ++RP+VIL+AGL G GKTT+S KLA +LK K+ + +L A D YRPAAI
Sbjct: 86 MGGESTDLKL-ENRPSVILMAGLNGAGKTTLSGKLALFLKTKKNRRPLLAACDTYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +L EQ+ VP+Y E P +IA ++EAK K+ D VIVDTAGRL ID+ +M+E+
Sbjct: 145 EQLRVLAEQIDVPIYLNLEEKDPVKIALAAIQEAKAKSYDTVIVDTAGRLAIDETLMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK NP E L VVDAMTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 AAVKEATNPDETLFVVDAMTGQDAVNTAKEFNSRLDFDGVVLTKLDGDTRGGAALSIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+ME L+ F+P RMA RILGMGD++S VE+AQE +E+A ++Q+KI
Sbjct: 265 VNKPIKFVGTGEKMEALDVFHPSRMADRILGMGDIVSLVERAQEQYDEEEARKLQRKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + + +MG++ + MIPG+GK V ++++ +EA+I +MTP E
Sbjct: 325 NQFDFNDFLAQLQQIKKMGNIKDLAAMIPGVGKAIK-DVEVDDRAILGVEAIILSMTPYE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R+ PE+L S R++R+A+ SGKT Q V++L+ Q Q R MK + G
Sbjct: 384 RQHPEVLNGS--RKERIAKGSGKTVQDVNRLIKQFDQTRKMMKMVSG 428
>gi|357055423|ref|ZP_09116491.1| signal recognition particle protein [Clostridium clostridioforme
2_1_49FAA]
gi|355382542|gb|EHG29639.1| signal recognition particle protein [Clostridium clostridioforme
2_1_49FAA]
Length = 458
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 173/346 (50%), Positives = 248/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKS-RPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAI 59
MG E +E+ S ++I++AGLQG GKTT +AK+A +K +G+ +L A D+YRPAAI
Sbjct: 87 MGSETTEISLKPSGEISIIMMAGLQGAGKTTTTAKIAAKMKAKGRKPLLAACDIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL I G++VG+PV++ G + KP IAK +E A K ++VVI+DTAGRL ID+ MMDEL
Sbjct: 147 EQLQINGDRVGIPVFSMGNKNKPVDIAKAAVEHASKNGLNVVILDTAGRLHIDETMMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++K L+ + +LVVDAMTGQ+A + TFN +IGI G ILTKLDGD+RGGAALS++ V
Sbjct: 207 VEIKDNLDVCQTILVVDAMTGQDAVNVAGTFNDKIGIDGVILTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPI VG GE++ DLE FYPDRMA RILGMGD+ S +EKA + +E A+E+ +K+
Sbjct: 267 TGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDIQSLIEKAAAEVDEEQAKELSQKLRK 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIEAMTPE 298
A FD+NDFL Q + + +MG M ++ M+PGMG +++ A + E EKS+ +E++I +MT E
Sbjct: 327 AEFDYNDFLTQMQQIKKMGGMGSILSMMPGMGNQLSGADMDEGEKSMHRVESIILSMTKE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P L+ +P R++R+A+ +G +V++LV Q QM+ MK +
Sbjct: 387 ERANPNLI--NPSRKQRIAKGAGVEVSEVNRLVKQFDQMKKMMKQM 430
>gi|257124951|ref|YP_003163065.1| signal recognition particle protein [Leptotrichia buccalis
C-1013-b]
gi|257048890|gb|ACV38074.1| signal recognition particle protein [Leptotrichia buccalis
C-1013-b]
Length = 446
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 170/342 (49%), Positives = 241/342 (70%), Gaps = 2/342 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG + A PT+++L+GLQG GKTT S KLA +L+ +G+ L+ DVYRPAA
Sbjct: 86 LGGSNVSIAKADKNPTIVMLSGLQGAGKTTFSGKLAKHLRSKGEKPFLIGADVYRPAAKK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQV VPV+T + P +I KQG+E +K ++ VI+DTAGRL ID+ +M EL+
Sbjct: 146 QLKVLGEQVKVPVFTIDESIDPLEIVKQGIEASKTEHATYVIIDTAGRLHIDEQLMHELQ 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K NP E+LLVVD MTGQ+A + FN ++ ITG +LTKLDGD+RGGAALSVKEV+
Sbjct: 206 DIKDCFNPNEILLVVDGMTGQDAVNVAKEFNEQLDITGVVLTKLDGDTRGGAALSVKEVA 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK + GE+++D+ PF+PDR+A RILGMGDV+S VEKAQE + +++A++M++K
Sbjct: 266 GKPIKFISEGEKLDDIAPFHPDRLASRILGMGDVVSLVEKAQEAIDEKEAKKMEEKFRKN 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FDF DFLKQ + + +MGS++ ++ MIPG+ + + AEK +K +EA+I +MT +ER
Sbjct: 326 QFDFEDFLKQFKMIRKMGSIAGIMKMIPGV-DTSMIDMGMAEKEMKKVEAIIFSMTVQER 384
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
P+LL R+ R+A+ SG V++L+ Q QM+ MK
Sbjct: 385 RDPKLLKNGS-RKMRIAKGSGVQVNDVNKLIKQFEQMKQMMK 425
>gi|387879550|ref|YP_006309853.1| signal recognition particle protein [Streptococcus parasanguinis
FW213]
gi|414155538|ref|ZP_11411850.1| signal recognition particle protein [Streptococcus sp. F0442]
gi|386793003|gb|AFJ26038.1| signal recognition particle protein [Streptococcus parasanguinis
FW213]
gi|410873511|gb|EKS21446.1| signal recognition particle protein [Streptococcus sp. F0442]
Length = 523
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 166/353 (47%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E ++++ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETADIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV++ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFSLGTEVPAVEIVRQGLEQARANHNDYVLIDTAGRLQIDEKLMGEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDVKALAEPNEILLVVDAMIGQEAANVAREFNEQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+GRILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSGRILGMGDMLTLIEKASQEYDEKRSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ M+PGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NPAMKNLKVDEREIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GV+ G
Sbjct: 386 AERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|323456635|gb|EGB12501.1| putative GTP binding signal recognition particle protein SRP54
[Aureococcus anophagefferens]
Length = 530
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 182/370 (49%), Positives = 243/370 (65%), Gaps = 24/370 (6%)
Query: 1 MGGEVSELVFAKS-----------------RPTVILLAGLQGVGKTTVSAKLANYLKKQ- 42
MGG+ EL+F+ PTV+LL GLQG GKTT +AKLA LK++
Sbjct: 119 MGGDDDELLFSDDPEAAAKARAGLAYRDDGAPTVVLLCGLQGAGKTTAAAKLALRLKEEE 178
Query: 43 GKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQ---IAKQGLEEAKKKNVD 99
GK+ MLVA DVYRPAA++QL ILGEQVGVPVY E IA G+ AK++ D
Sbjct: 179 GKTPMLVAADVYRPAAVEQLQILGEQVGVPVYAEAFEAGAGDAVAIATAGVRAAKERGAD 238
Query: 100 VVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGA 159
VVIVDTAGR I++++M EL+ V+ P E LLV+DAMTGQ+AA+L F+ +TG+
Sbjct: 239 VVIVDTAGRQVIEESLMAELRSVRAATKPDETLLVLDAMTGQDAASLAKRFDDACPLTGS 298
Query: 160 ILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVE 219
+LTKLDGD+RGGAALSV+ VSGKPIK VG GE++ DLEPF+P RMA RILGMGDV+S VE
Sbjct: 299 VLTKLDGDARGGAALSVRAVSGKPIKFVGVGEKVGDLEPFFPARMASRILGMGDVVSLVE 358
Query: 220 KAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVR 279
KA + +A+ + ++ A F+F+D+L Q R V+ MGS V M+PGMG I Q+
Sbjct: 359 KASKQQSAAEAKAVMERTKQAKFNFDDYLDQARMVSNMGSFGAVAKMMPGMGGIDNDQIA 418
Query: 280 EAEKSLKIMEAMIEAMTPEEREKPELL---AESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 336
AE +KI ++I +MTP+ER +P+L+ + R+KR+A SG++ Q Q +++ Q
Sbjct: 419 AAEAKIKIQASLINSMTPKERGEPDLIIRDKSALARQKRIAAGSGRSVDQAKQFLSEFQQ 478
Query: 337 MRVRMKNLMG 346
MR M + G
Sbjct: 479 MRTMMAKMAG 488
>gi|42519388|ref|NP_965318.1| signal recognition particle protein [Lactobacillus johnsonii NCC
533]
gi|41583676|gb|AAS09284.1| signal recognition particle protein [Lactobacillus johnsonii NCC
533]
Length = 476
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/362 (48%), Positives = 247/362 (68%), Gaps = 11/362 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L + PT+I++ GLQG GKTT KLANYL K K+ +L+AGD+YRPAAI
Sbjct: 87 MGEEAVSLNKSPHIPTIIMMVGLQGTGKTTTVGKLANYLMKNEKARPLLIAGDIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ VPVY+ + ++I K GLEEA K D V++DTAGRL+ID+ +MDEL
Sbjct: 147 EQLKQIGQQLDVPVYSEDNQ-DVAEIVKHGLEEADKNKNDYVLIDTAGRLEIDEQLMDEL 205
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K V V +P LLVVDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAALS++ V
Sbjct: 206 KRVTEVAHPDNTLLVVDAMTGQAATQVAEGFNNDLDLTGIVLTKLDGDTRGGAALSIRAV 265
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PI G+GE++ DL F+PDRMA RILGMGD+L+ +EKAQ+ ++AE+M +K+
Sbjct: 266 TGLPIIFTGQGEKLTDLSTFHPDRMASRILGMGDMLTLIEKAQQDYDAKEAEKMAEKMRE 325
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V +MG + ++I MIPG+G PA ++ EK + ++A++ +MTP
Sbjct: 326 NTFDFNDFIDQMEQVQKMGPLDQIIKMIPGLGN-NPALKNIQIPEKQIDHIKAIVYSMTP 384
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
EERE P++L +P RR+R+A SG++ +V++++ Q Q K +M M G + L+
Sbjct: 385 EERENPDIL--NPSRRRRIAAGSGRSIAEVNRMIKQFKQ----SKEMMQKMTKGDMGELA 438
Query: 358 NL 359
NL
Sbjct: 439 NL 440
>gi|400290248|ref|ZP_10792275.1| signal recognition particle protein [Streptococcus ratti FA-1 = DSM
20564]
gi|399921039|gb|EJN93856.1| signal recognition particle protein [Streptococcus ratti FA-1 = DSM
20564]
Length = 515
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 170/353 (48%), Positives = 240/353 (67%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E SEL + PTVI++AGLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETSELEKSPKIPTVIMMAGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTE +I + GL +AK+ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFEMGTEHTAVEIVRAGLAQAKENRNDYVLIDTAGRLQIDEKLMAEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++++
Sbjct: 207 RDVKALAQPDEILLVVDSMIGQEAANVAREFNNQLEITGLVLTKIDGDTRGGAALSIRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKISDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM P A V+ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDERDIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE PELL +P RR+R+A SG T V++ + Q + K + GV+ G
Sbjct: 386 AERENPELL--TPSRRRRIAAGSGNTFVNVNKFIKDFNQAK---KMMQGVLSG 433
>gi|187934489|ref|YP_001885443.1| signal recognition particle protein [Clostridium botulinum B str.
Eklund 17B]
gi|187722642|gb|ACD23863.1| signal recognition particle protein [Clostridium botulinum B str.
Eklund 17B]
Length = 452
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 248/349 (71%), Gaps = 5/349 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S++ ++ S TVI+L GLQG GKTT+ KLA L+K K +LVA DVYRPAAI
Sbjct: 87 MGGSESKINYSSSGTTVIMLVGLQGAGKTTMCGKLALELRKNNKKPLLVACDVYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL I+G+Q+ +PV++ G +V P IAK G+ K +++I+DTAGRL ID+A+M EL+
Sbjct: 147 QLEIVGKQIEIPVFSMGDKVNPVDIAKAGIAHGKDNGNNIIIIDTAGRLHIDEALMQELQ 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K +NP+E+LLVVD+MTGQ+A + +FN ++ +TG ILTKLDGD+RGGAALS++ ++
Sbjct: 207 DIKENVNPSEILLVVDSMTGQDAVNVAESFNKDLDVTGVILTKLDGDTRGGAALSIRSIT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK +G GE++ D E F+PDRM+ RILGMGDVLS +EKAQ + +++A ++ K++++
Sbjct: 267 EKPIKYIGTGEKLSDFEVFHPDRMSSRILGMGDVLSLIEKAQSAIDEKEAADLGKRMLNQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPE 298
F+FND+L + ++G +++++ MIPGM ++ + + E ++ +++I++MT +
Sbjct: 327 EFNFNDYLTAIEQMKKLGPLNKILEMIPGMNSKELQNVDLSKGEDAINKTKSVIQSMTEK 386
Query: 299 EREKPELL---AESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER P LL + + R+KRVA+ +G T Q+V++LV M+ M+++
Sbjct: 387 ERTNPVLLMSGSTASSRKKRVARGAGTTIQEVNKLVKSYEMMKKNMRHM 435
>gi|319947050|ref|ZP_08021284.1| signal recognition particle protein [Streptococcus australis ATCC
700641]
gi|417920737|ref|ZP_12564237.1| signal recognition particle protein [Streptococcus australis ATCC
700641]
gi|319747098|gb|EFV99357.1| signal recognition particle protein [Streptococcus australis ATCC
700641]
gi|342828165|gb|EGU62541.1| signal recognition particle protein [Streptococcus australis ATCC
700641]
Length = 523
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 166/353 (47%), Positives = 246/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E ++++ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETADIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV++ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFSLGTEVPAVEIVRQGLEQARANHNDYVLIDTAGRLQIDEKLMGEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+++
Sbjct: 207 RDVKALAEPNEILLVVDAMIGQEAANVAREFNEQLEVTGVILTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+GRILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSGRILGMGDMLTLIEKASQEYDEKRSIELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ M+PGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NPAMKNLKVDEREIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GV+ G
Sbjct: 386 AERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|329770523|ref|ZP_08261901.1| signal recognition particle protein [Gemella sanguinis M325]
gi|328836272|gb|EGF85941.1| signal recognition particle protein [Gemella sanguinis M325]
Length = 450
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 172/341 (50%), Positives = 242/341 (70%), Gaps = 6/341 (1%)
Query: 14 RPTVILLAGLQGVGKTTVSAKLA-NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVP 72
+ T +++ GLQG GKTT + KLA K K +L+A DVYRPAA+ QL LG+Q+ +
Sbjct: 99 KITTVMMVGLQGAGKTTTAGKLALKAKKTMKKKPLLIAADVYRPAAVQQLKTLGKQLDIE 158
Query: 73 VYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVL 132
V+ + P+ I K+GLE AK+ + VI+DTAGRL ID+ +MDELKD+K V NP E+L
Sbjct: 159 VFFVDKD--PADIVKEGLEFAKENYYNYVIIDTAGRLHIDELLMDELKDIKSVSNPDEIL 216
Query: 133 LVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGER 192
LVVDAM GQEA + T+F+ ++ ITG +LTKLDGD+RGGAALS+K ++GKPIKLVG GE+
Sbjct: 217 LVVDAMIGQEAVNIATSFDEQLDITGLVLTKLDGDTRGGAALSIKSITGKPIKLVGMGEK 276
Query: 193 MEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTR 252
M DLE F+P+RMA RILGMGDVL+ +EKAQ + +++A++MQ+KI++ +F F DFL Q
Sbjct: 277 MNDLELFHPERMASRILGMGDVLTLIEKAQASIDEDEAKKMQEKILTQSFTFEDFLSQLE 336
Query: 253 TVARMGSMSRVIGMIPGMGKITPAQVREA-EKSLKIMEAMIEAMTPEEREKPELLAESPV 311
V ++GS+ ++GMIPGMGK+ + EK +EA+I++MT EER+ P+++ +
Sbjct: 337 QVKKLGSIKDILGMIPGMGKMKNMNLDAVDEKQFVYIEAIIKSMTIEERQNPDII--NVP 394
Query: 312 RRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 352
RRKR+AQ SG+ +V +L+ Q +MR MK G+M S
Sbjct: 395 RRKRIAQGSGRPISEVHKLIKQFEEMRKMMKQFGGLMNDKS 435
>gi|317502602|ref|ZP_07960723.1| signal recognition particle protein [Prevotella salivae DSM 15606]
gi|315666283|gb|EFV05829.1| signal recognition particle protein [Prevotella salivae DSM 15606]
Length = 449
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 178/365 (48%), Positives = 242/365 (66%), Gaps = 13/365 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG+ ++ + P +IL++GLQG GKTT S KLAN LK K+ K +LVA DVYRPAAI
Sbjct: 86 MGGDTVDIQL-EGHPAIILMSGLQGSGKTTFSGKLANLLKNKRNKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL ++GEQ+GVPVY+ IA + EAK K DVVIVDTAGRL +D+ MM+E+
Sbjct: 145 QQLKVVGEQIGVPVYSEPESKDVITIANNAVREAKAKGYDVVIVDTAGRLAVDEEMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++K L+P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 ANLKNALHPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+ME ++ F+P RMA RILGMGD++S VE+AQE +E+A +QKKI
Sbjct: 265 VTKPIKFVGTGEKMEAIDAFHPVRMADRILGMGDIVSLVERAQEQFDEEEARRLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK V + + K +EA+I++MTP+E
Sbjct: 325 NKFDFNDFLGQIEQIKKMGNLKDLASMIPGVGKAIK-DVDIDDNAFKGIEAIIKSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMGVMEGG 351
R PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK ++M M+G
Sbjct: 384 RTNPEILNTS--RRQRIAKGSGTNIQEVNKLIKQFDQTRKMMKMVTGNQMASMMSRMKGM 441
Query: 352 SLPAL 356
+P +
Sbjct: 442 KMPGM 446
>gi|149371680|ref|ZP_01891096.1| signal recognition particle protein [unidentified eubacterium
SCB49]
gi|149355307|gb|EDM43867.1| signal recognition particle protein [unidentified eubacterium
SCB49]
Length = 442
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 172/335 (51%), Positives = 234/335 (69%), Gaps = 5/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG+ + + S P+VIL++GLQG GKTT S KLAN+LK K+ K +LVA DVYRPAAI
Sbjct: 86 MGGDAAGVNLQGS-PSVILMSGLQGSGKTTFSGKLANFLKSKKTKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL ++GEQ+GV VY+ + P IA + AK+ +VVIVDTAGRL +D+AMM E+
Sbjct: 145 NQLHVVGEQIGVEVYSEEGNMDPVSIATNAIAHAKQNGHNVVIVDTAGRLAVDEAMMVEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++V + + P E L VVDAMTGQ+A TFN I G +LTKLDGD+RGGAA+S+K V
Sbjct: 205 ENVHKAIQPQETLFVVDAMTGQDAVNTAKTFNERINFDGVVLTKLDGDTRGGAAISIKSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+M+ ++ FYP RMA RILGMGDV+S VE+AQE +++A ++QKKI
Sbjct: 265 VNKPIKFIGTGEKMDAIDIFYPSRMADRILGMGDVVSLVERAQEQFDEDEARKLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DF+KQ + + +MGSM ++GMIPG GK V + + K +EA+I++MTP E
Sbjct: 325 NQFGFDDFMKQIQQIKKMGSMKDLVGMIPGAGKALK-DVDIDDDAFKGIEAIIQSMTPAE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
R P L+ S R+KR+A+ SG + QV+QL+ Q
Sbjct: 384 RTSPALINGS--RKKRIAKGSGTSVTQVNQLLKQF 416
>gi|65321173|ref|ZP_00394132.1| COG0541: Signal recognition particle GTPase [Bacillus anthracis
str. A2012]
Length = 464
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 168/335 (50%), Positives = 241/335 (71%), Gaps = 8/335 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI
Sbjct: 87 MGGEQSKIAIANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAG L ID+ +MDEL
Sbjct: 147 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGHLHIDEELMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V
Sbjct: 207 AKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ PIK G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +
Sbjct: 267 TNTPIKFAGMGEKLDALEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMT 296
+F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT
Sbjct: 327 LSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMT 384
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 331
ERE+PE++ S R+KR+A+ SG T Q++++L+
Sbjct: 385 KLEREQPEIINAS--RKKRIAKGSGTTVQKINRLI 417
>gi|374384305|ref|ZP_09641831.1| signal recognition particle protein [Odoribacter laneus YIT 12061]
gi|373228912|gb|EHP51215.1| signal recognition particle protein [Odoribacter laneus YIT 12061]
Length = 441
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 178/347 (51%), Positives = 238/347 (68%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG+ + + K P ++L++GLQG GKTT S KLAN LK K+GK +LVA DVYRPAAI
Sbjct: 86 MGGKNVD-IDVKGNPAIVLMSGLQGSGKTTFSGKLANMLKTKRGKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +LGEQ+GVPVYT P IA+ + +AK + DVVIVDTAGRL ID+ MM E+
Sbjct: 145 EQLRVLGEQIGVPVYTDENSKDPVGIAQAAIRQAKAEGKDVVIVDTAGRLAIDEQMMTEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K+ + P E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAALS++ V
Sbjct: 205 TAIKKAIEPNETLFVVDAMTGQDAVNTAKEFNERLDFDGVILTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+ME ++ F+P+RMA RILGMGD++S VEKAQE E+A+++QKK+
Sbjct: 265 VNKPIKFVGTGEKMEAIDAFHPERMADRILGMGDIVSLVEKAQEQFDAEEAKKLQKKLSK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F+FNDFL Q + + +MG++ + MIPG+GK V + + K +EA+I +MTP E
Sbjct: 325 NQFNFNDFLGQIQQIKKMGNIKDLASMIPGVGKALK-NVDIDDDAFKSVEAIIHSMTPME 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
RE P+++ S RRKR+A SG T Q V++L+ Q + + MK L G
Sbjct: 384 REMPDIINGS--RRKRIALGSGTTVQDVNRLLKQFEESKKMMKMLSG 428
>gi|402310924|ref|ZP_10829882.1| signal recognition particle protein [Eubacterium sp. AS15]
gi|400366612|gb|EJP19639.1| signal recognition particle protein [Eubacterium sp. AS15]
Length = 443
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 171/354 (48%), Positives = 242/354 (68%), Gaps = 9/354 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S++ + PTVIL++GLQG GKTT + KLA +LK QGK+ MLVA DVYRPAAI
Sbjct: 87 MGSVQSKINISSKPPTVILMSGLQGAGKTTTTGKLAYHLKSQGKNPMLVACDVYRPAAIT 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL IL ++VG Y+ P IA+ +E AK DVVI+DTAGRL ID+ +M ELK
Sbjct: 147 QLQILSDKVGAKFYSEEGNKNPVTIAQNAVESAKTLGFDVVIIDTAGRLHIDEELMQELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + P+E+LLVVDAMTGQ+ +V +F+ +GI G IL+KLDGD+RGGAALS++ V+
Sbjct: 207 NIKSTVRPSEILLVVDAMTGQDTVNIVKSFDEALGIDGVILSKLDGDTRGGAALSIRAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK GE++ DLEPFYPDR+A RILGMGDV+S +EKAQ + ++ +E++ KI +
Sbjct: 267 NKPIKFAAIGEKINDLEPFYPDRIASRILGMGDVMSLIEKAQSAVDEQSMKELEDKIRNR 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA---EKSLKIMEAMIEAMTP 297
+F+F DFLKQ + + +MG + +I MIPG+ P Q++ A +K L +EA+I++MT
Sbjct: 327 DFNFEDFLKQMQQIKKMGPLKNIIEMIPGV----PKQLKNADIDDKELLKIEAIIQSMTK 382
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 351
+ER +P ++ S R+ R+A+ SG QV++L+ Q + R MK + + G
Sbjct: 383 QERLEPSIINGS--RKIRIAKGSGTQVSQVNKLLKQFEETRKMMKQMTNIKMSG 434
>gi|295094758|emb|CBK83849.1| signal recognition particle protein [Coprococcus sp. ART55/1]
Length = 448
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 176/354 (49%), Positives = 238/354 (67%), Gaps = 10/354 (2%)
Query: 1 MGGEVSELVFAKSRP----TVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRP 56
MG E++E+ K RP T+I++ GLQG GKTT +AKLA K +GK +LVA DVYRP
Sbjct: 87 MGSEMTEI---KLRPSNEITIIMMCGLQGAGKTTTAAKLAYQFKNKGKKPLLVACDVYRP 143
Query: 57 AAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMM 116
AAI QL + GE+VGVPV+ G KP IAK ++ A K N+++V +DTAGRL +D+ MM
Sbjct: 144 AAIKQLQVNGEKVGVPVFAMGDNNKPLDIAKAAVQHAAKNNINLVFLDTAGRLHVDEDMM 203
Query: 117 DELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSV 176
+EL ++K L+ +L VD+MTGQ+A + TTFN +IGI G ILTKLDGD+RGGAALS+
Sbjct: 204 NELAEIKENLDIAYTILTVDSMTGQDAVNVATTFNDKIGIDGVILTKLDGDTRGGAALSI 263
Query: 177 KEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKK 236
K V+GKPI G GE++ DLEPFYPDRMA RILGMGDV S +EKAQ + +E A+EM++K
Sbjct: 264 KAVTGKPILYSGMGEKLTDLEPFYPDRMASRILGMGDVESLIEKAQSAIDEEKAKEMEQK 323
Query: 237 IMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMT 296
A+FDFNDFL Q + +MG M ++ M+PGM V E + K +A++ +MT
Sbjct: 324 FRKASFDFNDFLDQMAQLEQMGGMQEILSMMPGMAS-QMKNVEIDENAAKTPKAIVLSMT 382
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
P ER + + SP R+KR+A +G V++ + Q Q + MK + G+M G
Sbjct: 383 PRERSLQDPI--SPSRKKRIADGAGVQIADVNRFLKQFEQSKKMMKQMSGMMGG 434
>gi|291278684|ref|YP_003495519.1| signal recognition particle protein [Deferribacter desulfuricans
SSM1]
gi|290753386|dbj|BAI79763.1| signal recognition particle protein [Deferribacter desulfuricans
SSM1]
Length = 447
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 161/320 (50%), Positives = 229/320 (71%), Gaps = 4/320 (1%)
Query: 15 PTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 74
PT I+L GLQG GKTT + KLA Y +K GK +LVA D+YRPAAIDQL ILG+Q+ V V+
Sbjct: 102 PTKIMLVGLQGSGKTTTAGKLAKYFQKNGKDVLLVADDIYRPAAIDQLEILGKQLKVDVF 161
Query: 75 TAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLV 134
+ E +IAK+ ++ AK DVVI+DTAGRL ID+ +M+ELK++K +NP E+L V
Sbjct: 162 SKRDEQDAVKIAKEAVQHAKSAAKDVVIIDTAGRLHIDETLMEELKNIKEAINPDEILFV 221
Query: 135 VDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERME 194
DAMTGQ+A + TFN + ITG ILTKLDGD+RGGAALS++EV+GKP+K VG GE+++
Sbjct: 222 ADAMTGQDAVNVAKTFNEMLDITGVILTKLDGDARGGAALSIREVTGKPLKFVGTGEKLD 281
Query: 195 DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTV 254
EPFYPDRMA RILGMGD+++ VE AQ+ +++++AE++ KI DFND L+Q + +
Sbjct: 282 AFEPFYPDRMASRILGMGDIVTLVEMAQDAIEEDEAEKLATKIQKKGLDFNDMLQQMKMI 341
Query: 255 ARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRK 314
+MGS ++ ++PG + V E+ + K +EA+I +MTP ER ++L S R++
Sbjct: 342 KKMGSFESILKLLPGFSGLGNIDVDES--NFKRIEAIINSMTPLERTNYKILNAS--RKR 397
Query: 315 RVAQDSGKTEQQVSQLVAQL 334
R+A+ SG + +V++L+ QL
Sbjct: 398 RIAKGSGTSVSEVNKLIQQL 417
>gi|310658884|ref|YP_003936605.1| Signal Recognition Particle (SRP) component with 4.5S RNA (ffs)
[[Clostridium] sticklandii]
gi|308825662|emb|CBH21700.1| Signal Recognition Particle (SRP) component with 4.5S RNA (ffs)
[[Clostridium] sticklandii]
Length = 448
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 171/345 (49%), Positives = 236/345 (68%), Gaps = 3/345 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S++ + PTVI+L GLQG GKT+ + KLA LKKQGK MLVA DVYRPAAI
Sbjct: 87 MGGVQSKINISSKPPTVIMLVGLQGAGKTSTAGKLALNLKKQGKQPMLVACDVYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL I+ G Y+ P +IA +G E+AK D+VI+DTAGRL ID+ +MDELK
Sbjct: 147 QLEIVASGAGAIFYSEEGNTNPVEIATKGYEKAKTLGYDIVIIDTAGRLHIDENLMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + P E++LVVD+MTGQ+A + +F+ +GI G ILTKLDGD+RGGAALS+K ++
Sbjct: 207 NIKSSIKPHEIMLVVDSMTGQDAVNIAESFDQTLGIDGVILTKLDGDTRGGAALSIKAIT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK GE++EDLE FYPDRMA RILGMGDV+S +EKAQ ++ A+EMQ K+ SA
Sbjct: 267 KKPIKYAAVGEKLEDLEQFYPDRMASRILGMGDVMSLIEKAQSAFDEDKAKEMQAKMKSA 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEE 299
+F F+DFL Q + + +MG + ++ MIPGM ++ + V +K L +EA+I++MT +E
Sbjct: 327 DFTFDDFLDQMQQIKKMGPLKNLLEMIPGMSQMKQLKDVDIDDKELVKIEAIIQSMTKKE 386
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
R+ P ++ S R+KR+A SG QV++L+ Q + + MK
Sbjct: 387 RQNPSIINAS--RKKRIAMGSGTHVSQVNRLLKQFEESKKMMKQF 429
>gi|358067367|ref|ZP_09153848.1| signal recognition particle protein [Johnsonella ignava ATCC 51276]
gi|356694539|gb|EHI56199.1| signal recognition particle protein [Johnsonella ignava ATCC 51276]
Length = 457
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 169/350 (48%), Positives = 245/350 (70%), Gaps = 5/350 (1%)
Query: 1 MGGEVSELVFA-KSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAI 59
+G E E++ + TVI++AGLQG GKTT +AKLA LK +G + +LVA DVYRPAA+
Sbjct: 87 IGSETKEIIMQPQGEITVIMMAGLQGAGKTTTAAKLAGKLKSKGNTPLLVACDVYRPAAV 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL I GE+ +PV++ G + P IAK LE AKK + +++I+DTAGRL ID+ MMDEL
Sbjct: 147 EQLKINGEKQNIPVFSMGNNLSPVDIAKAALEHAKKNHNNILILDTAGRLHIDEKMMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
D+K+ +N + LLVVDAMTGQ+A + +FN +I + G I+TKLDGD+RGGAALS+K V
Sbjct: 207 ADIKKNINVNQTLLVVDAMTGQDAVNVAESFNDKIELDGIIVTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPI VG GE++ DLE F+PDRMAGRILGMGD+LS +EKA+ M + +++ +K+
Sbjct: 267 TGKPILYVGMGEKLSDLEVFHPDRMAGRILGMGDILSLIEKAEAEMDADKVKQISRKLQK 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT-PA-QVREAEKSLKIMEAMIEAMTP 297
A FDFNDFL+Q + + +MG + ++ M+PG+G + PA ++ EK +EA+I +M
Sbjct: 327 AEFDFNDFLEQLQQIKKMGDLGGILNMLPGIGGMNLPAGGLQPDEKQFSRVEAIILSMNV 386
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 347
+ER P +L +P R+ R+A+ +G +V+++V Q QM+ MK G+
Sbjct: 387 KERTDPAVL--NPSRKNRIAKGAGVNISEVNRIVKQFEQMKKMMKQFSGM 434
>gi|440751304|ref|ZP_20930538.1| Signal recognition particle, subunit Ffh SRP54 [Mariniradius
saccharolyticus AK6]
gi|436480168|gb|ELP36425.1| Signal recognition particle, subunit Ffh SRP54 [Mariniradius
saccharolyticus AK6]
Length = 445
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 176/361 (48%), Positives = 243/361 (67%), Gaps = 9/361 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG ++ K P VIL++GLQG GKTT + KLA+ LKKQG+ +L A D+YRPAAID
Sbjct: 86 MGGSKVDINI-KGDPAVILISGLQGSGKTTFTGKLASLLKKQGRQVLLAACDIYRPAAID 144
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQVGV VY QIA + +E AKK +VIVDTAGRL +D+ MM E++
Sbjct: 145 QLKVLGEQVGVEVYAEPENKNALQIASRAIEHAKKTGKKIVIVDTAGRLAVDEQMMQEIE 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K+ LNP+E L VVD+MTGQ+A TF+ + G +LTKLDGD+RGGAA+S++ V
Sbjct: 205 ALKKALNPSETLFVVDSMTGQDAVNTAKTFDERLNFDGVVLTKLDGDTRGGAAISIRHVV 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK + GE+ME+++ F+PDRMA RILGMGDV+S VE+AQ+ +E+A+ + KI
Sbjct: 265 NKPIKFISTGEKMENIDVFHPDRMAQRILGMGDVISLVERAQQSFDEEEAKRINAKIRKN 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F+F+DFL Q V +MG++ ++GMIPGM K+ + + S K +EA+I +MTP+ER
Sbjct: 325 QFNFDDFLSQLEQVKKMGNIKDLMGMIPGMNKMMKG-LDIDDDSFKPIEAIIRSMTPKER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--NLMGVME---GGSLPA 355
E P+++ S RRKR+A SG+ +V+ L+ Q MR MK N MG + GG +P
Sbjct: 384 ENPDIIDGS--RRKRLAAGSGRNITEVNNLMKQFDDMRKLMKQMNKMGGAQKALGGMMPK 441
Query: 356 L 356
+
Sbjct: 442 M 442
>gi|313115226|ref|ZP_07800709.1| signal recognition particle protein [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310622455|gb|EFQ05927.1| signal recognition particle protein [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 451
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 184/375 (49%), Positives = 241/375 (64%), Gaps = 27/375 (7%)
Query: 2 GGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQ 61
G E + L T+I+L GLQG GKTT +AKLA Y KQG+ MLVA D+YRPAAIDQ
Sbjct: 89 GSEAARLNIKNKGQTIIMLCGLQGNGKTTHAAKLAKYFIKQGRRPMLVACDIYRPAAIDQ 148
Query: 62 LVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKD 121
L ++G+Q G PV+T KP +IAK+ L AK D+VI+DTAGRLQID +M EL D
Sbjct: 149 LQVVGKQAGAPVFTL-PGAKPPEIAKKALAHAKDYGNDIVILDTAGRLQIDDVLMQELVD 207
Query: 122 VKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSG 181
+K + E LLVVDAM GQ+A + TFN ++GI G ILTK DGD+RGGAALSV V+G
Sbjct: 208 IKEAVPVDETLLVVDAMAGQDAVNVAKTFNEKVGIDGIILTKTDGDTRGGAALSVLAVTG 267
Query: 182 KPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSAN 241
KPIK G GE+++DL+ F+PDRMA RILGMGDVLS +E+AQE ++ AEE K++M
Sbjct: 268 KPIKFQGTGEKLDDLDVFHPDRMASRILGMGDVLSLIERAQETADEKAAEETAKRMMENK 327
Query: 242 FDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEERE 301
FD ND L Q + +MG ++ M+PG I P+QV EK+ +EAMI +MT EERE
Sbjct: 328 FDMNDMLDQFAQIRKMGGAGAMLSMLPGGSGIDPSQVD--EKAFDRIEAMIYSMTKEERE 385
Query: 302 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLED 361
KP ++ +P R++R+A SG T V++L+ Q F+M +M
Sbjct: 386 KPSII--NPKRKRRIAAGSGTTVADVNKLLKQ-FEMMQKM-------------------- 422
Query: 362 ALKSEQKAPPGTARR 376
+K +K+P G ARR
Sbjct: 423 -MKQFKKSPKGFARR 436
>gi|347532240|ref|YP_004839003.1| signal recognition particle protein [Roseburia hominis A2-183]
gi|345502388|gb|AEN97071.1| signal recognition particle protein [Roseburia hominis A2-183]
Length = 452
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 176/356 (49%), Positives = 244/356 (68%), Gaps = 7/356 (1%)
Query: 1 MGGEVSELVFAKSRP-TVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAI 59
MG E +E+ + TVI++ GLQG GKTT +AKLA K++GK +LVAGDVYRPAAI
Sbjct: 87 MGSETAEITLQPGKAVTVIMMTGLQGAGKTTTAAKLAGKFKQKGKKVLLVAGDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL I G++ GV V++ G + P IAK +E A K + ++VI+DTAGRL ID+ MM EL
Sbjct: 147 EQLQINGQKQGVEVFSMGDKNSPVNIAKAAMEHAAKNDFNIVIIDTAGRLHIDEDMMAEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K + + +LVVDAMTGQ+A + TF+ IGI G ILTKLDGD+RGGAALS++ V
Sbjct: 207 IQIKENVTVHQTVLVVDAMTGQDAVNVAKTFDERIGIDGVILTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPI G GE++ DLE FYPDRMA RILGMGDVL+ +EKAQE +E A+++++K+
Sbjct: 267 TGKPIFYAGMGEKLSDLEQFYPDRMASRILGMGDVLTLIEKAQEDFDEERAKKIEQKMRK 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM----GKITPAQVREAEKSLKIMEAMIEAM 295
FDF +L+ + +MG +S ++GM+PG+ GK+ AEKSL EA+I +M
Sbjct: 327 NEFDFEMYLESMSQMKKMGGLSSILGMMPGLGMGAGKMPDIDEAAAEKSLSRTEAIIYSM 386
Query: 296 TPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 351
TPEER+ P LL +P R++R+A +G +V++LV Q QM+ MK + G+M+ G
Sbjct: 387 TPEERQNPSLL--NPSRKRRIAVGAGVDIAEVNRLVKQFEQMKKMMKQMPGMMKKG 440
>gi|320354484|ref|YP_004195823.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfobulbus propionicus DSM 2032]
gi|320122986|gb|ADW18532.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfobulbus propionicus DSM 2032]
Length = 449
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 176/357 (49%), Positives = 246/357 (68%), Gaps = 10/357 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+G + L +P VI+LAGLQG GKTT +AKLA LK++G++ LV DVYRPAAI+
Sbjct: 86 LGSQAEPLKLDGRQPVVIMLAGLQGSGKTTTAAKLAKQLKEKGRAPFLVPADVYRPAAIE 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQVGVPVY + TE KP IA+Q + EA+ + D VI+DTAGRL +D+A+M EL+
Sbjct: 146 QLHVLGEQVGVPVYASTTEQKPVDIARQAVAEARTGHYDTVIIDTAGRLHVDEALMAELQ 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++ R + EVL V DAMTGQ+A + FN ++ ITG +LTK++GD+RGGAALSVK+V+
Sbjct: 206 EISRTVPLAEVLFVADAMTGQDAVTVADKFNTDLEITGVVLTKMEGDARGGAALSVKKVT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GE +E LE F+PDR A RILGMGDVLS +EKA+ V+ Q++AE + KKI
Sbjct: 266 GKPIKFVGVGESVEALEVFHPDRAASRILGMGDVLSLIEKAEAVVDQKNAERLAKKIQKN 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA----EKSLKIMEAMIEAMT 296
F DFL Q + + +MG++ +++GMIPG+ K+ Q+++A +K L EA+I +MT
Sbjct: 326 AFTLEDFLDQIQQIKKMGTLEQIMGMIPGINKLK--QLKDAPKPDQKELVKTEAIIRSMT 383
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL--MGVMEGG 351
+ER ++ S RR R+A SG + +V++++ M MKNL G++ GG
Sbjct: 384 LKERRNHRIIDAS--RRVRIANGSGTSVAEVNRVLKSYTMMLKMMKNLKGKGIVSGG 438
>gi|300361928|ref|ZP_07058105.1| signal recognition particle protein [Lactobacillus gasseri JV-V03]
gi|300354547|gb|EFJ70418.1| signal recognition particle protein [Lactobacillus gasseri JV-V03]
Length = 476
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 173/362 (47%), Positives = 246/362 (67%), Gaps = 11/362 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L ++ PT+I++ GLQG GKTT KLANYL K K+ +L+AGD+YRPAAI
Sbjct: 87 MGEEAVSLNKSQHIPTIIMMVGLQGTGKTTTVGKLANYLMKNEKARPLLIAGDIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ VPVY+ + ++I GLEEA K D V++DTAGRL+ID+ +M+EL
Sbjct: 147 DQLKQIGQQLNVPVYSEDNQ-DVAEIVNHGLEEADKNKNDYVLIDTAGRLEIDEQLMNEL 205
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K V V +P LLVVDAMTGQ A + FN ++ +TG ILTKLDGD+RGGAALS++ V
Sbjct: 206 KRVTAVAHPDNTLLVVDAMTGQAATQVAEGFNNDLDLTGIILTKLDGDTRGGAALSIRAV 265
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PI G+GE++ DL F+PDRMA RILGMGD+L+ +EKAQ+ ++AE+M +K+
Sbjct: 266 TGLPIIFTGQGEKLTDLSTFHPDRMASRILGMGDMLTLIEKAQQDYDAKEAEKMAEKMRE 325
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V +MG + ++I MIPG+G PA ++ EK + ++A++ +MTP
Sbjct: 326 NTFDFNDFIDQMDQVQKMGPLDQIIKMIPGLGN-NPALKNIQIPEKQISHIKAIVYSMTP 384
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
EERE P++L +P RR+R+A SG++ +V++++ Q Q K +M M G + +
Sbjct: 385 EERENPDIL--NPSRRRRIAAGSGRSIAEVNRMIKQFKQ----SKEMMQKMTKGDMGEFA 438
Query: 358 NL 359
NL
Sbjct: 439 NL 440
>gi|344201963|ref|YP_004787106.1| signal recognition particle protein [Muricauda ruestringensis DSM
13258]
gi|343953885|gb|AEM69684.1| signal recognition particle protein [Muricauda ruestringensis DSM
13258]
Length = 442
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 173/335 (51%), Positives = 230/335 (68%), Gaps = 5/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE +E + P+VIL++GLQG GKTT S KLANYLK K+ K +LVA DVYRPAAI
Sbjct: 86 MGGE-AEGIDLSGDPSVILMSGLQGSGKTTFSGKLANYLKNKKTKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ++G+Q+GV VY+ P IAK G+ AK K +VVI+DTAGRL +D+ MM E+
Sbjct: 145 DQLHVVGDQIGVEVYSDRENNDPVAIAKAGIAHAKSKGCNVVIIDTAGRLAVDEQMMTEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++ + + P E L VVD+MTGQ+A TFN + G ILTKLDGD+RGGAA+S+K V
Sbjct: 205 SNIHKAIKPQETLFVVDSMTGQDAVNTAKTFNDVLNFDGVILTKLDGDTRGGAAISIKSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E A ++QKKI
Sbjct: 265 VDKPIKFIGTGEKMEAIDVFHPSRMADRILGMGDVVSLVERAQEQFDEEQARKIQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFL Q + + +MG+M ++GMIPG GK + + + K +EA+I +MTPEE
Sbjct: 325 NKFGFDDFLSQIQQIKKMGNMKDLMGMIPGAGKALKG-LDIDDDAFKHIEAIIHSMTPEE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
R P L S R+KR+A SG + Q+V+QL+ Q
Sbjct: 384 RSTPAKLNAS--RKKRIAAGSGTSIQEVNQLLKQF 416
>gi|296111749|ref|YP_003622131.1| signal recognition particle protein Ffh [Leuconostoc kimchii IMSNU
11154]
gi|339490980|ref|YP_004705485.1| signal recognition particle protein [Leuconostoc sp. C2]
gi|295833281|gb|ADG41162.1| signal recognition particle protein Ffh [Leuconostoc kimchii IMSNU
11154]
gi|338852652|gb|AEJ30862.1| signal recognition particle protein [Leuconostoc sp. C2]
Length = 491
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 174/345 (50%), Positives = 231/345 (66%), Gaps = 6/345 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L + PT+I++AGLQG GKTT AKLA LKK+ ++ +L+A DVYRPAAI
Sbjct: 87 MGEEAVPLNKSPKIPTIIMMAGLQGAGKTTTVAKLAYKLKKESQARPLLIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ILG + +PV+ GTEV P I +QGL +A + D V +DTAGRLQID +M EL
Sbjct: 147 DQLEILGRDLDIPVFQLGTEVNPRDIVRQGLAQAAENKNDYVFIDTAGRLQIDDVLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
KDV + P E+LL VDAMTGQ AA F+ + +TG +LTKLDGD+RGGAALS+++V
Sbjct: 207 KDVAEIAKPDEILLTVDAMTGQNAAETAKGFSASLDLTGVVLTKLDGDTRGGAALSIRDV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG+GE+ DL+ FYPDRMA RILGMGDVL+ +EKAQ +E + +K+
Sbjct: 267 TGKPIKFVGQGEKPTDLDVFYPDRMASRILGMGDVLTLIEKAQRDFDEEAQAKQLEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q + V MG M ++ MIPGM P A V K +EA++ +MTP
Sbjct: 327 NTFDFNDFVAQLKQVQSMGPMEDLLKMIPGMAN-NPALANVNIDAKQFAHLEAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
ERE P+L+ +P RR+R+A +G+ +V++++ Q QMR M
Sbjct: 386 AERENPDLI--NPSRRRRLAAGAGRPIVEVNRMIKQFDQMRKMMN 428
>gi|345880632|ref|ZP_08832178.1| signal recognition particle protein [Prevotella oulorum F0390]
gi|343922544|gb|EGV33244.1| signal recognition particle protein [Prevotella oulorum F0390]
Length = 448
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 178/365 (48%), Positives = 242/365 (66%), Gaps = 13/365 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE ++ + P +IL++GLQG GKTT S KLAN LK K+ K +LVA DVYRPAAI
Sbjct: 86 MGGEAVDINL-EGHPAIILMSGLQGSGKTTFSGKLANLLKLKRNKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL ++GEQ+ VPVY IA+ ++EAK K DVVIVDTAGRL +D+ MM+E+
Sbjct: 145 EQLKVVGEQIQVPVYAEPENKDVVAIAQHAIQEAKAKGNDVVIVDTAGRLAVDEEMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K L+P+E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAALS++ +
Sbjct: 205 ASLKEALHPSETLFVVDAMTGQDAVNTAKEFNDRLDFDGVILTKLDGDTRGGAALSIRTI 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+ME L+ F+P+RMA RILGMGD++S VE+AQE +E+A+ +Q+KI
Sbjct: 265 VTKPIKFVGTGEKMEALDVFHPNRMADRILGMGDIVSLVERAQEQFDEEEAKRLQRKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK V + + +EA+I +MTP+E
Sbjct: 325 NKFDFNDFLGQIEQIKKMGNLKDLASMIPGVGKAIK-DVDIDDNAFVSIEAIIRSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMGVMEGG 351
R PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK +M M+G
Sbjct: 384 RTNPEILNTS--RRQRIAKGSGTNIQEVNKLIKQFDQTRKMMKMVTGNQMAGMMSRMKGM 441
Query: 352 SLPAL 356
+P +
Sbjct: 442 KIPGM 446
>gi|406660919|ref|ZP_11069046.1| hypothetical protein B879_01054 [Cecembia lonarensis LW9]
gi|405555302|gb|EKB50346.1| hypothetical protein B879_01054 [Cecembia lonarensis LW9]
Length = 445
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 174/361 (48%), Positives = 242/361 (67%), Gaps = 9/361 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG + V K P V+L++GLQG GKTT S K A+ LKKQG+ +L A D+YRPAAID
Sbjct: 86 MGGTKVD-VNIKGDPAVVLISGLQGSGKTTFSGKFASLLKKQGRQVLLAACDIYRPAAID 144
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+GV VY +IA + +E AKK +VIVDTAGRL +D+ MM E++
Sbjct: 145 QLKVLGEQIGVEVYAEPENKNALEIASRAVEYAKKNGKKIVIVDTAGRLAVDEQMMQEIE 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K+ LNP+E L VVD+MTGQ+A TF+ + G +LTKLDGD+RGGAA+S++ V
Sbjct: 205 ALKKALNPSETLFVVDSMTGQDAVNTAKTFDERLNFDGVVLTKLDGDTRGGAAISIRHVV 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK + GE+ME+++ F+PDRMA RILGMGDV+S VE+AQ+ +++A+ + KI
Sbjct: 265 NKPIKFISTGEKMENIDVFHPDRMAQRILGMGDVISLVERAQQTFDEDEAKRLNAKIRKN 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F+F+DFL Q + +MG++ ++GMIPGMGK + + S K +EA+I +MTP ER
Sbjct: 325 QFNFDDFLSQLEQIKKMGNIKDLMGMIPGMGKAMKG-LDFDDDSFKPVEAIIRSMTPNER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--NLMGVME---GGSLPA 355
E P+++ S RRKR+A SG++ +V+ L+ Q MR MK N MG + GG LP
Sbjct: 384 ENPDIIDGS--RRKRIANGSGRSITEVNNLMKQFSDMRKMMKQMNKMGGAKRALGGMLPG 441
Query: 356 L 356
+
Sbjct: 442 M 442
>gi|433462612|ref|ZP_20420189.1| signal recognition particle protein [Halobacillus sp. BAB-2008]
gi|432188560|gb|ELK45741.1| signal recognition particle protein [Halobacillus sp. BAB-2008]
Length = 446
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 165/346 (47%), Positives = 245/346 (70%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAI 59
MGG S++ AK PTVI++ GLQG GKTT + KLAN L+K +S +LVA D+YRPAAI
Sbjct: 87 MGGNESKIAVAKRPPTVIMMVGLQGAGKTTTTGKLANLLRKSYNRSPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV+ GTE P IAK + +AK+++ D V++DTAGRL ID +M EL
Sbjct: 147 KQLETLGKQLSMPVHAEGTEANPVDIAKNAIAKAKEEHYDYVLIDTAGRLHIDGDLMGEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+++K +NP E+ LVVDAMTGQ+A + +F+ ++ ++G +LTKLDGD+RGGAALS+K V
Sbjct: 207 QEIKEAVNPDEIFLVVDAMTGQDAVNVAESFDEQLDVSGVLLTKLDGDTRGGAALSIKAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE+++ LE F+P+RMA RILGMGD+L+ +EKAQ + ++ A E++ K+ +
Sbjct: 267 TGKPIKFAGMGEKLDQLETFHPERMASRILGMGDMLTLIEKAQTQVDEKQARELETKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
A+F F DFL+Q + V MG + ++ MIPG K+ Q V +K + +EA+I++MT
Sbjct: 327 ASFTFEDFLEQMQQVKNMGPLDEILNMIPGANKMKGLQNVSFDDKQIVHVEAIIQSMTKH 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER+ P ++ S R+KR+A+ SG + +V++L+ Q +M+ MK +
Sbjct: 387 ERQDPSVMNAS--RKKRIAKGSGTSVSEVNRLLKQFEEMKKMMKQM 430
>gi|300854474|ref|YP_003779458.1| signal recognition particle GTPase [Clostridium ljungdahlii DSM
13528]
gi|300434589|gb|ADK14356.1| predicted signal recognition particle GTPase [Clostridium
ljungdahlii DSM 13528]
Length = 449
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 166/352 (47%), Positives = 246/352 (69%), Gaps = 2/352 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S + + + TVI+L GLQG GKTT+ KLA L+K+ K +L A D+YRPAAI
Sbjct: 87 MGKNESGIEYNSNGLTVIMLVGLQGAGKTTMCGKLALQLRKKNKKPLLAACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G+++ VPV++ G +V I K LE AK N++VVI+DTAGRLQID+ +M ELK
Sbjct: 147 QLQVVGKEIDVPVFSMGDKVTAVDICKGALEYAKNNNLNVVIIDTAGRLQIDEELMGELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K +NP E++LVVDAMTGQ+A + ++FN ++ I+G ILTKLDGD+RGGAALS++ ++
Sbjct: 207 QIKENINPDEIMLVVDAMTGQDAVNVASSFNEQLNISGVILTKLDGDTRGGAALSIRAMT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK VG GE+M DL+ FYPDRMA RILGMGDVLS +EKAQ+ + +E+AE++ ++++
Sbjct: 267 DKPIKFVGMGEKMNDLQVFYPDRMASRILGMGDVLSLIEKAQQSIDKEEAEKLGNRMLNK 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPG--MGKITPAQVREAEKSLKIMEAMIEAMTPE 298
F+F DFL + +MG +S+++ M+PG M ++ + E+ L +E +I +MT +
Sbjct: 327 EFNFEDFLAIMQQTKKMGPISKLMEMVPGVNMKELKGVDFSKGEQELAKIECIINSMTVK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ER P +++ S R+KR+A SG T Q V++L+ +++ MK L G+ +G
Sbjct: 387 ERRNPSIISGSSSRKKRIALGSGTTIQMVNKLLKDFEKIKKTMKQLNGMKKG 438
>gi|306833449|ref|ZP_07466576.1| signal recognition particle protein [Streptococcus bovis ATCC
700338]
gi|336064234|ref|YP_004559093.1| signal recognition particle subunit SRP54/Ffh [Streptococcus
pasteurianus ATCC 43144]
gi|304424219|gb|EFM27358.1| signal recognition particle protein [Streptococcus bovis ATCC
700338]
gi|334282434|dbj|BAK30007.1| signal recognition particle, subunit SRP54/Ffh [Streptococcus
pasteurianus ATCC 43144]
Length = 521
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 168/353 (47%), Positives = 240/353 (67%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +EL + PT+I++ GLQG GKTT + KLAN L K + +++A D+YRPAAI
Sbjct: 87 LGSETAELEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKDENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG Q+ VPV+ GT+ +I GL +AK+ + D VI+DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGSQINVPVFDMGTDHSAVEIVTNGLAQAKENHNDYVIIDTAGRLQIDEKLMEEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + NP E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E+
Sbjct: 207 RDVKALANPNEILLVVDSMIGQEAANVADEFNKQLDITGVVLTKIDGDTRGGAALSIREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TSKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA + EK++ A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALKNFKVDEKAVARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|383480060|ref|YP_005388954.1| Signal recognition particle, FfH [Streptococcus pyogenes MGAS15252]
gi|383493976|ref|YP_005411652.1| Signal recognition particle, FfH [Streptococcus pyogenes MGAS1882]
gi|378928050|gb|AFC66256.1| Signal recognition particle, FfH [Streptococcus pyogenes MGAS15252]
gi|378929704|gb|AFC68121.1| Signal recognition particle, FfH [Streptococcus pyogenes MGAS1882]
Length = 520
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 165/352 (46%), Positives = 243/352 (69%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GT+ I ++GLE+A++ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARENHNDYVLIDTAGRLQIDEKLMEEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E+
Sbjct: 207 RDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP
Sbjct: 327 NTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 387 ERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|256843368|ref|ZP_05548856.1| signal recognition particle protein [Lactobacillus crispatus
125-2-CHN]
gi|256849811|ref|ZP_05555242.1| signal recognition protein Ffh [Lactobacillus crispatus MV-1A-US]
gi|262046944|ref|ZP_06019904.1| signal recognition particle protein [Lactobacillus crispatus
MV-3A-US]
gi|293381186|ref|ZP_06627194.1| signal recognition particle protein [Lactobacillus crispatus 214-1]
gi|256614788|gb|EEU19989.1| signal recognition particle protein [Lactobacillus crispatus
125-2-CHN]
gi|256713300|gb|EEU28290.1| signal recognition protein Ffh [Lactobacillus crispatus MV-1A-US]
gi|260572926|gb|EEX29486.1| signal recognition particle protein [Lactobacillus crispatus
MV-3A-US]
gi|290922226|gb|EFD99220.1| signal recognition particle protein [Lactobacillus crispatus 214-1]
Length = 476
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 171/362 (47%), Positives = 251/362 (69%), Gaps = 10/362 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L +K PT+I++ GLQG GKTT KLA +L+K K+ +L+AGD+YRPAA+
Sbjct: 87 MGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGKLAYHLQKTEKARPLLIAGDIYRPAAV 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ VPVY+ E ++I + GL EA+K D V++DTAGRL+ID+ +M+EL
Sbjct: 147 DQLKQIGDQLKVPVYSEDGEKDVAKIVQDGLAEAEKNKNDYVLIDTAGRLEIDEPLMEEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ VK+V +P +LLVVDAMTGQ A + F+ + +TG ILTKLDGD+RGGAALS++ V
Sbjct: 207 ERVKKVTHPDNILLVVDAMTGQAATDVAKGFDERLDVTGVILTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPI G+GE++ DL+ F+PDRMA RILGMGD+LS +EKAQ+ ++AE++ +K+
Sbjct: 267 TGKPILFTGQGEKLSDLDVFHPDRMASRILGMGDMLSLIEKAQQDYDAKEAEKVAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q + V +MG + +++ MIPG+ P + +K + EA++ +MTP
Sbjct: 327 NTFDFNDFVDQLQQVQKMGPLDQIMKMIPGLAN-NPQLKNLNVDQKQIDHTEAIVYSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
EERE P++L +P RR+R+A SG+ +V++++ Q QMR ++M M G++ LS
Sbjct: 386 EERENPDML--NPSRRRRIAAGSGRPVVEVNRMIKQFKQMR----DMMSKMSKGNMKGLS 439
Query: 358 NL 359
NL
Sbjct: 440 NL 441
>gi|422416321|ref|ZP_16493278.1| signal recognition particle protein, partial [Listeria innocua FSL
J1-023]
gi|313623288|gb|EFR93529.1| signal recognition particle protein [Listeria innocua FSL J1-023]
Length = 415
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 169/346 (48%), Positives = 246/346 (71%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE S++ A PTVI++ GLQG GKTT S AN L KK + +LVA D+YRPAAI
Sbjct: 52 MGGEESKIGTADRPPTVIMMVGLQGAGKTTTSXXXANLLRKKYNRKPLLVAADIYRPAAI 111
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL LG+Q+ +PV++ G +V P +IAKQ + +AK++++D VI+DTAGRL ID+ +MDEL
Sbjct: 112 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEEHLDYVIIDTAGRLHIDETLMDEL 171
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K VK + PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 172 KQVKEIATPTEILLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSV 231
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK V GE+ME +E F+PDRMA RILGMGDVLS +EKAQ + E + M++K+
Sbjct: 232 TGKPIKFVATGEKMEAIETFHPDRMASRILGMGDVLSLIEKAQTDVDAEKMKAMEQKMKD 291
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 298
+ +DFL Q + V +MG + ++ M+PG K+ ++ +K L +EA+I++MT
Sbjct: 292 NSMTLDDFLDQLQQVKQMGPLDELLKMMPGANKMKGLDNMQVDDKQLGHIEAIIKSMTKN 351
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
E++ P+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 352 EKDNPDIINAS--RRKRIARGSGRPIQEINRLLKQFAEMKKMMKQM 395
>gi|227510448|ref|ZP_03940497.1| signal recognition particle protein Ffh [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
gi|227190100|gb|EEI70167.1| signal recognition particle protein Ffh [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
Length = 478
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 179/362 (49%), Positives = 255/362 (70%), Gaps = 10/362 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MG E L ++ PTVI+++GLQG GKTT KLA LK +Q +L+A DVYRPAAI
Sbjct: 87 MGQEAVPLNKSEKIPTVIMMSGLQGAGKTTTVGKLALKLKNEQNARPLLIADDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+QV VPV+ GT+V P +IAK+GLE+AK+ + D VI+DTAGRLQID+ +MDEL
Sbjct: 147 EQLQTVGQQVDVPVFQLGTDVDPVEIAKRGLEKAKEDHNDYVIIDTAGRLQIDEKLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++K+ +NP E+LLV+DAMTGQ A A F+ + +TG +LTKLDGD+RGGAALS++ V
Sbjct: 207 SNIKKAVNPDEILLVIDAMTGQNAVATAEGFDKTLDVTGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG+GE+MEDL+ F+PDRMA RILGMGD+LS +EK Q+ Q+ AEE+ +KI
Sbjct: 267 TGKPIKFVGQGEKMEDLDVFHPDRMASRILGMGDMLSLIEKTQKEYDQKQAEELSEKIKE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDFL Q + +MG + ++ MIPGM PA V K + ++A+I +MT
Sbjct: 327 NTFDFNDFLDQLDQIQKMGPLDEIMKMIPGMAN-NPALQNVNMNPKDMDHLKAIIYSMTE 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
+ER P+++ +P RR+R+++ SG+ Q+V++++ Q Q MK +M + G++ +
Sbjct: 386 QERTDPDVM--NPSRRRRISRGSGRPIQEVNRMIKQFGQ----MKTMMNKVSKGNMSGME 439
Query: 358 NL 359
N+
Sbjct: 440 NM 441
>gi|227878849|ref|ZP_03996756.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus crispatus
JV-V01]
gi|227861597|gb|EEJ69209.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus crispatus
JV-V01]
Length = 476
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 172/362 (47%), Positives = 251/362 (69%), Gaps = 10/362 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L +K PT+I++ GLQG GKTT KLA +L+K K+ +L+AGD+YRPAA+
Sbjct: 87 MGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGKLAYHLQKTEKARPLLIAGDIYRPAAV 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ VPVY+ E ++I + GL EA+K D V++DTAGRL+ID+ +M+EL
Sbjct: 147 DQLKQIGDQLKVPVYSEDGEKDVAKIVQDGLAEAEKNKNDYVLIDTAGRLEIDEPLMEEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ VK+V +P +LLVVDAMTGQ A + F+ + ITG ILTKLDGD+RGGAALS++ V
Sbjct: 207 ERVKKVAHPDNILLVVDAMTGQAATDVAKGFDERLDITGVILTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPI G+GE++ DL+ F+PDRMA RILGMGD+LS +EKAQ+ ++AE++ +K+
Sbjct: 267 TGKPILFTGQGEKLSDLDVFHPDRMASRILGMGDMLSLIEKAQQDYDAKEAEKVAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q + V +MG + +++ MIPG+ P + +K + EA++ +MTP
Sbjct: 327 NTFDFNDFVDQLQQVQKMGPLDQIMKMIPGLAN-NPQLKNLNVDQKQIDHTEAIVYSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
EERE P++L +P RR+R+A SG+ +V++++ Q QMR ++M M G++ LS
Sbjct: 386 EERENPDML--NPSRRRRIAAGSGRPVVEVNRMIKQFKQMR----DMMSKMSKGNMKGLS 439
Query: 358 NL 359
NL
Sbjct: 440 NL 441
>gi|323340725|ref|ZP_08080977.1| signal recognition particle protein [Lactobacillus ruminis ATCC
25644]
gi|323091848|gb|EFZ34468.1| signal recognition particle protein [Lactobacillus ruminis ATCC
25644]
Length = 493
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 169/362 (46%), Positives = 248/362 (68%), Gaps = 10/362 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG L +K PTVI++ GLQG GKTT + KLA LKK+ + +++A DVYRPAA+
Sbjct: 99 MGESAVSLNKSKKIPTVIMMVGLQGAGKTTTAGKLAYKLKKEENARPLMIAADVYRPAAV 158
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+ + VPV+ GT+V P +I +QG++ A+++ D VI+DTAGRLQID+ +M+EL
Sbjct: 159 DQLKTVGKSIDVPVFELGTDVDPVEIVRQGMKLAEEQKNDYVIIDTAGRLQIDEKLMNEL 218
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K + +P E+LL VD+MTGQ A + FN + +TG +LTKLDGD+RGGAALS++ V
Sbjct: 219 ARIKELTHPDEILLTVDSMTGQNAVEVAQGFNDTLDVTGVVLTKLDGDTRGGAALSIRAV 278
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK +G+GE+M L+ FYP+RMA RILGMGD+L+ +EKAQ+ Q+ AEE+ K+
Sbjct: 279 TGKPIKFIGQGEKMTALDVFYPERMASRILGMGDMLTLIEKAQQDFDQKKAEELADKMRE 338
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF++Q V MG + ++ MIPGM PA V+ K ++ +A++ +MTP
Sbjct: 339 NTFDFNDFIEQMEQVQNMGPIEDIMKMIPGMAN-NPALKNVKVDPKDIEHTKAIVYSMTP 397
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
ERE P++L +P RR+R+A SG+ Q+V++++ Q QMR ++M M G+ +
Sbjct: 398 AEREDPDML--NPSRRRRIAAGSGRPIQEVNRMIKQFKQMR----DMMQKMTNGNFGGME 451
Query: 358 NL 359
N+
Sbjct: 452 NM 453
>gi|339625133|ref|ZP_08660922.1| signal recognition particle protein [Fructobacillus fructosus KCTC
3544]
Length = 489
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 172/344 (50%), Positives = 234/344 (68%), Gaps = 4/344 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L + PTVI++AGLQG GKTT AKLA LKK+ K+ +L+A DVYRPAAI
Sbjct: 87 MGEEAVPLNKSDKIPTVIMMAGLQGAGKTTTVAKLAYKLKKENKARPLLIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +LG+ + +PV++ GT+V P +I K GL++A+ D V +DTAGRLQID+ +M EL
Sbjct: 147 DQLEVLGKDLDIPVFSEGTDVDPREIVKHGLKQAEANKNDYVFIDTAGRLQIDETLMTEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
KD+ + P E+LL VDAMTGQ A F + +TG +LTKLDGD+RGGAALS+++V
Sbjct: 207 KDIATIAQPDEILLTVDAMTGQNATETAEGFANALDLTGVVLTKLDGDTRGGAALSIRDV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG+GE+ DL+ FYPDRMA RILGMGD+L+F+EKAQ + ++ E +K+
Sbjct: 267 TGKPIKFVGQGEKPTDLDVFYPDRMASRILGMGDMLTFIEKAQRDVDEKKQAEQLEKMRQ 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF+ Q R V MG M +I MIPGM G + K+ MEA++ +MT
Sbjct: 327 NTFDFNDFVDQLRQVQNMGPMEDLIKMIPGMAGNPALQNLNIDPKTFTHMEAIVSSMTKA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
ERE P+LL +P RR+R+A +G+ +V++++ Q QM+ M
Sbjct: 387 ERENPDLL--NPSRRRRLAAGAGRPIVEVNKMLKQFDQMKKMMN 428
>gi|423318442|ref|ZP_17296319.1| signal recognition particle protein [Lactobacillus crispatus
FB049-03]
gi|423321926|ref|ZP_17299797.1| signal recognition particle protein [Lactobacillus crispatus
FB077-07]
gi|405591380|gb|EKB64882.1| signal recognition particle protein [Lactobacillus crispatus
FB077-07]
gi|405595567|gb|EKB68947.1| signal recognition particle protein [Lactobacillus crispatus
FB049-03]
Length = 476
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 171/362 (47%), Positives = 251/362 (69%), Gaps = 10/362 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L +K PT+I++ GLQG GKTT KLA +L+K K+ +L+AGD+YRPAA+
Sbjct: 87 MGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGKLAYHLQKTEKARPLLIAGDIYRPAAV 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ VPVY+ E ++I + GL EA+K D V++DTAGRL+ID+ +M+EL
Sbjct: 147 DQLKQIGDQLKVPVYSEDGEKDVAKIVQDGLAEAEKNKNDYVLIDTAGRLEIDEPLMEEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ VK+V +P +LLVVDAMTGQ A + F+ + +TG ILTKLDGD+RGGAALS++ V
Sbjct: 207 ERVKKVTHPDNILLVVDAMTGQAATDVAKGFDERLDVTGVILTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPI G+GE++ DL+ F+PDRMA RILGMGD+LS +EKAQ+ ++AE++ +K+
Sbjct: 267 TGKPILFTGQGEKLSDLDVFHPDRMASRILGMGDMLSLIEKAQQDYDAKEAEKVAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q + V +MG + +++ MIPG+ P + +K + EA++ +MTP
Sbjct: 327 NTFDFNDFVDQLQQVQKMGPLDQIMKMIPGLSN-NPQLKNLNVDQKQIDHTEAIVYSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
EERE P++L +P RR+R+A SG+ +V++++ Q QMR ++M M G++ LS
Sbjct: 386 EERENPDML--NPSRRRRIAAGSGRPVVEVNRMIKQFKQMR----DMMSKMSKGNMKGLS 439
Query: 358 NL 359
NL
Sbjct: 440 NL 441
>gi|402831194|ref|ZP_10879886.1| signal recognition particle protein [Capnocytophaga sp. CM59]
gi|402282891|gb|EJU31418.1| signal recognition particle protein [Capnocytophaga sp. CM59]
Length = 444
Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 167/335 (49%), Positives = 233/335 (69%), Gaps = 5/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG+ + + + P+VIL++GLQG GKTT S KLAN+LK K+ K +LVA DVYRPAAI
Sbjct: 86 MGGDATGVNLS-GNPSVILMSGLQGSGKTTFSGKLANFLKTKKNKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL I+G+Q+GVPV++ P IA++G+ AK ++VVI+DTAGRL +D+ MM E+
Sbjct: 145 DQLHIVGDQIGVPVFSEKENNNPVDIAQKGIAYAKSNGLNVVIIDTAGRLAVDEQMMKEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
D+ + ++P E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAA+S+K V
Sbjct: 205 ADIHKAVSPQETLFVVDAMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAAISIKSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+M+ ++ FYP RMA RILGMGDV+S VE+AQE +E A ++QKKI
Sbjct: 265 VNKPIKFVGTGEKMDAIDVFYPARMADRILGMGDVVSLVERAQEQFDEEQARKLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFL Q + + +MGSM ++GM+PG+GK + ++ + K +EA+I +MTP E
Sbjct: 325 NQFGFDDFLSQIQQIKKMGSMKDLLGMLPGVGKAVK-DLDISDDAFKYIEAIIYSMTPAE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
R P ++ S R+ R+A+ SG+ +V+QL+ Q
Sbjct: 384 RSNPSIINTS--RKNRIAKGSGRNIAEVNQLLKQF 416
>gi|363892796|ref|ZP_09319949.1| signal recognition particle protein [Eubacteriaceae bacterium CM2]
gi|361962560|gb|EHL15674.1| signal recognition particle protein [Eubacteriaceae bacterium CM2]
Length = 444
Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 172/350 (49%), Positives = 238/350 (68%), Gaps = 3/350 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S+L + PTVIL++GLQG GKTT + KLA LK+QGK+ MLVA DVYRPAA+
Sbjct: 87 MGGVQSKLNISSKPPTVILMSGLQGAGKTTTTGKLAYNLKQQGKNPMLVACDVYRPAAVK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL IL ++VG Y+ P QIA + EAK D+VI+DTAGRL ID+ +MDELK
Sbjct: 147 QLEILADKVGAKFYSEENNNNPVQIATNSVAEAKTLGFDIVIIDTAGRLHIDEELMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + P E+LLVVDAMTGQ+A +V TF+ +GI G IL+KLDGD+RGGAALS++ V+
Sbjct: 207 NIKSSVKPHEILLVVDAMTGQDAVNIVKTFDEALGIDGVILSKLDGDTRGGAALSIRAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK GE++ DLEPFYPDRMA RILGMGDVLS +EKAQ + + + + K+ +
Sbjct: 267 DKPIKFSATGEKIGDLEPFYPDRMANRILGMGDVLSLIEKAQSSVDMDAIKGLDSKMKNM 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
+F+F+DFL Q + + +MGS+ +I MIPG+ K + +K L +EA+I++MT +ER
Sbjct: 327 DFNFDDFLLQMQQIKKMGSLKSLIEMIPGLSK-QMKNIDVDDKELVKIEAIIQSMTKQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
P ++ S R+ R+A+ SG Q+++L+ Q + R MK + +G
Sbjct: 386 ANPSIINGS--RKLRIAKGSGMQVNQINRLLKQFEETRKMMKQMSNFTKG 433
>gi|363890887|ref|ZP_09318181.1| signal recognition particle protein [Eubacteriaceae bacterium CM5]
gi|361962654|gb|EHL15763.1| signal recognition particle protein [Eubacteriaceae bacterium CM5]
Length = 444
Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 173/350 (49%), Positives = 238/350 (68%), Gaps = 3/350 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S+L + PTVIL++GLQG GKTT + KLA LK+QGK+ MLVA DVYRPAA+
Sbjct: 87 MGGVQSKLNISSKPPTVILMSGLQGAGKTTTTGKLAYNLKQQGKNPMLVACDVYRPAAVK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL IL ++VG Y+ P QIA + EAK D+VI+DTAGRL ID+ +MDELK
Sbjct: 147 QLEILADKVGAKFYSEENNNNPVQIATNAVAEAKTLGFDIVIIDTAGRLHIDEELMDELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + P E+LLVVDAMTGQ+A +V TF+ +GI G IL+KLDGD+RGGAALS++ V+
Sbjct: 207 NIKSSVKPHEILLVVDAMTGQDAVNIVKTFDEALGIDGVILSKLDGDTRGGAALSIRAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK GE++ DLEPFYPDRMA RILGMGDVLS +EKAQ + + + + K+ +
Sbjct: 267 DKPIKFSATGEKIGDLEPFYPDRMANRILGMGDVLSLIEKAQSSVDMDAIKGLDSKMKNM 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
+F+F+DFL Q + + +MGS+ +I MIPG+ K + +K L +EA+I++MT +ER
Sbjct: 327 DFNFDDFLLQMQQIKKMGSLKSLIEMIPGLSK-QMKNIDVDDKELVKIEAIIQSMTKQER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
P ++ S R+ R+A+ SG QV++L+ Q + R MK + +G
Sbjct: 386 ANPSIINGS--RKLRIAKGSGMQVNQVNRLLKQFEETRKMMKQMSTFTKG 433
>gi|156741648|ref|YP_001431777.1| signal recognition particle protein [Roseiflexus castenholzii DSM
13941]
gi|156232976|gb|ABU57759.1| signal recognition particle protein [Roseiflexus castenholzii DSM
13941]
Length = 444
Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 171/349 (48%), Positives = 246/349 (70%), Gaps = 7/349 (2%)
Query: 8 LVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGE 67
L A+ PT+I+L GLQG GKTT +AKLA +L+K+GK +LVA D+YRPAAI QL LG
Sbjct: 93 LAEARPGPTIIMLIGLQGSGKTTTAAKLALWLRKKGKRPLLVAADIYRPAAITQLESLGR 152
Query: 68 QVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLN 127
Q+G+PV++ G + +P IA+ + A+ +++ VI+DTAGRLQID+ +M EL+ + +
Sbjct: 153 QLGIPVHSEGAQSRPPDIARNAVRRARDESITHVIIDTAGRLQIDEPLMVELEQINAAVE 212
Query: 128 PTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLV 187
P E LLVVDAM GQEA + FN +G+TG I TK+DGD+RGGAALSV+ V+G PIK +
Sbjct: 213 PVERLLVVDAMIGQEAVRVAEEFNRRVGLTGIIFTKIDGDARGGAALSVRAVTGVPIKFL 272
Query: 188 GRGERME--DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 245
G GE++E +EPF+PDR+A RILGMGDVLS +E+A+ + +E A +MQKK++ +FDF
Sbjct: 273 GSGEKVEASTIEPFHPDRLASRILGMGDVLSLIERAEAIYDEEQARKMQKKLVKGSFDFE 332
Query: 246 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 305
DFL + + ++G + +++GMIPG+ K+ ++ EK LK +EA+I +MT EER P+L
Sbjct: 333 DFLASMQQMRKLGPLQQILGMIPGLDKLAREEI-ITEKDLKKIEAIIFSMTKEERRNPDL 391
Query: 306 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 354
+ R++R+A+ SG Q+V+QLV Q QM+ MK + G +GG P
Sbjct: 392 IKGR--RKERIARGSGTQVQEVTQLVNQFRQMQRMMKRMGG--KGGIDP 436
>gi|414564036|ref|YP_006042997.1| signal recognition particle protein [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
gi|338847101|gb|AEJ25313.1| signal recognition particle protein [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
Length = 523
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 168/353 (47%), Positives = 241/353 (68%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +EL + PTVI++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAELDKSPKIPTVIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GT I GL +AK+ D V++DTAGRLQID+ +MDEL
Sbjct: 147 DQLKTLGQQINVPVFDMGTNHSAVDIVANGLAQAKENRHDYVLIDTAGRLQIDEKLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++VK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E+
Sbjct: 207 REVKALAKPNEILLVVDSMIGQEAANVAYEFNNQLDITGVVLTKIDGDTRGGAALSIREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
FDFNDF++Q V MG M ++ MIPGM P A ++ +K + A++ +MTP
Sbjct: 327 NTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMA-TNPALANIKVDDKQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE+PELL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 386 EEREQPELL--TPSRRRRIAAGSGNSFVEVNKFIKDFNQAKAMMQ---GVMSG 433
>gi|194336566|ref|YP_002018360.1| signal recognition particle protein [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309043|gb|ACF43743.1| signal recognition particle protein [Pelodictyon
phaeoclathratiforme BU-1]
Length = 449
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 185/360 (51%), Positives = 240/360 (66%), Gaps = 5/360 (1%)
Query: 1 MGGEVSELVFA-KSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAI 59
MGGE L + K P VI++AGLQG GKTT AKLA LKK GK MLVA DVYRPAAI
Sbjct: 86 MGGEQKPLNLSPKKLPAVIMVAGLQGSGKTTFCAKLALRLKKSGKQPMLVAADVYRPAAI 145
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+QV VPV+ A E + A QGLE A+ DVVIVDTAGRLQID+ MM E
Sbjct: 146 DQLKALGQQVDVPVF-AIEEQDAMKAALQGLEAARSAAKDVVIVDTAGRLQIDQVMMAEA 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ +K L P E+L VVD+M GQEA FN + G +LTKLDGDSRGGAALS+++V
Sbjct: 205 ESLKHALKPDELLFVVDSMMGQEAVNTAKAFNDRLDFDGVVLTKLDGDSRGGAALSIRQV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK + GE+++DL+ FYPDRMA RILGMGD++SFVEKAQE + E + EMQKK+M
Sbjct: 265 VEKPIKFISIGEKVDDLDLFYPDRMAQRILGMGDIVSFVEKAQENLDLEKSLEMQKKLMK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FD NDF Q + + +MGS+ +I M+PG+ K+ P Q E K +EAMI +MT +E
Sbjct: 325 NEFDLNDFFDQLQQLKKMGSIQGLIEMVPGLNKMVPKQDLE-NLDFKPIEAMINSMTKQE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 359
+ P+++ S RR+R+A+ SG Q+V+ L+ Q +M+ M+++ + + G NL
Sbjct: 384 KMTPDIINGS--RRQRIARGSGTKVQEVNLLLKQFGEMKKMMRSVSKLSQSGRKITSQNL 441
>gi|392971839|ref|ZP_10337231.1| signal recognition particle protein Ffh [Staphylococcus equorum
subsp. equorum Mu2]
gi|403046837|ref|ZP_10902306.1| signal recognition particle [Staphylococcus sp. OJ82]
gi|392509552|emb|CCI60521.1| signal recognition particle protein Ffh [Staphylococcus equorum
subsp. equorum Mu2]
gi|402763533|gb|EJX17626.1| signal recognition particle [Staphylococcus sp. OJ82]
Length = 455
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 163/346 (47%), Positives = 245/346 (70%), Gaps = 4/346 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
MGGE + + A PTV+++ GLQG GKTT + KLA + KK K +LVA D+YRPAAI
Sbjct: 87 MGGENATIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPLLVAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ +PVY+ G +VKP QI + + AK+ ++D VI+DTAGRL +D+A+M EL
Sbjct: 147 DQLQTVGKQIDIPVYSEGDQVKPQQIVENAIAHAKEAHLDFVIIDTAGRLHVDEALMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
DVK + P E++LVVDAMTGQ+A + +F+ ++ ++G LTKLDGD+RGGAALS++ V
Sbjct: 207 SDVKEITKPDEIMLVVDAMTGQDAVNVAESFDSQLELSGVTLTKLDGDTRGGAALSIRSV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ + ++ A++++KK+ +
Sbjct: 267 TQKPIKFVGMSEKLDGLEAFHPERMASRILGMGDVLSLIEKAQTDVDEDKAKDLEKKMRT 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 298
++F DFL+Q V +G + ++ MIPGM K+ + + +K + ++A+I++MTP
Sbjct: 327 SSFTLEDFLEQLDQVKSLGPLDDIMKMIPGMNKMKGIENMNMDDKQIDHIKAIIQSMTPN 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
ER KPE L S R+KR+A+ SG++ Q++++L+ Q M+ MK
Sbjct: 387 ERNKPETLNVS--RKKRIAKGSGRSVQEINRLMKQFTDMKKMMKQF 430
>gi|336399713|ref|ZP_08580513.1| signal recognition particle subunit FFH/SRP54 (srp54) [Prevotella
multisaccharivorax DSM 17128]
gi|336069449|gb|EGN58083.1| signal recognition particle subunit FFH/SRP54 (srp54) [Prevotella
multisaccharivorax DSM 17128]
Length = 442
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 180/347 (51%), Positives = 240/347 (69%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE +EL SRP+VIL++GLQG GKTT S KLAN LK KQ K+ +LVA D+YRPAAI
Sbjct: 86 MGGEAAEL-HLNSRPSVILMSGLQGSGKTTFSGKLANLLKNKQHKNPLLVACDIYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ++GE V V VY+ ++IA L+EAK K DVVI+DTAGRL +D+ MM+E+
Sbjct: 145 DQLKVVGEGVSVSVYSEPDNKNVNEIADHALQEAKMKGHDVVIIDTAGRLAVDEQMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K ++P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 SSLKNHIHPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+ME ++ F+PDRMA RILGMGDV+S VE+AQE +E+A+ +QKKI
Sbjct: 265 VTKPIKFIGTGEKMEAIDVFHPDRMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFLKQ + +MG++ + MIPG+GK V + +EA+I +MTP+E
Sbjct: 325 NKFDFNDFLKQIEQIKKMGNIKDLASMIPGVGKAIK-NVDIDNNAFNGIEAIIRSMTPQE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R PE+L +S R+ R+A+ SG T Q+V++L+ Q Q R MK + G
Sbjct: 384 RTNPEILNQS--RKLRIAKGSGTTIQEVNRLIKQFDQTRKMMKMVTG 428
>gi|256847356|ref|ZP_05552802.1| signal recognition particle protein [Lactobacillus coleohominis
101-4-CHN]
gi|256716020|gb|EEU30995.1| signal recognition particle protein [Lactobacillus coleohominis
101-4-CHN]
Length = 480
Score = 330 bits (847), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 172/364 (47%), Positives = 246/364 (67%), Gaps = 13/364 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L A PTVI++ GLQG GKTT + KLA LK + + + +A DVYRPAAI
Sbjct: 87 MGSEAVALNKAPHIPTVIMMVGLQGAGKTTTAGKLAYRLKNEDHARPLFIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
QL + + + VPV+ GT+V P +I ++GL AK + D VI+DTAGRLQID+ +MDEL
Sbjct: 147 TQLQQVADSIDVPVFEKGTDVDPVEIVREGLAAAKANHNDYVIIDTAGRLQIDEQLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++K + P E+LLVVDAMTGQ A A F+ ++ +TG +LTKLDGD+RGGAA+S++ V
Sbjct: 207 ANIKELAQPNEILLVVDAMTGQNAVATAQGFDDKLDVTGVVLTKLDGDTRGGAAMSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG GE+ME+L+ F+PDRMA RILGMGD+++ +EKAQ+ +E A+E +K+ +
Sbjct: 267 TGKPIKFVGEGEKMENLDVFHPDRMASRILGMGDMMTLIEKAQKNFDEEQAQETMEKMRA 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FD+NDFL Q ++ MG + ++ M+PGM PA + K ++A+I++MTP
Sbjct: 327 NEFDYNDFLAQLDQISNMGPLENILKMMPGMAN-NPALKNLNIDPKQFLHIKAIIQSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-----NLMGV--MEG 350
EERE P+L+ +P RR+R+A +G+ +V++++ Q QMR MK N G+ M G
Sbjct: 386 EERENPDLM--NPSRRRRLAAGAGRPIVEVNRMIKQFGQMRKMMKQVTNGNFSGMQNMMG 443
Query: 351 GSLP 354
G +P
Sbjct: 444 GQMP 447
>gi|163752849|ref|ZP_02159973.1| signal recognition particle protein [Kordia algicida OT-1]
gi|161326581|gb|EDP97906.1| signal recognition particle protein [Kordia algicida OT-1]
Length = 443
Score = 330 bits (847), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 167/335 (49%), Positives = 234/335 (69%), Gaps = 5/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG+ + + + +P++IL++GLQG GKTT S KLANYLK K+ K +LVA DVYRPAAI
Sbjct: 86 MGGDAAGINLS-GKPSIILMSGLQGSGKTTFSGKLANYLKNKKTKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ++G+Q+ V VY+ P IA+ G+ AK+ +VVI+DTAGRL +D+AMM E+
Sbjct: 145 DQLHVVGDQIKVDVYSDKGNNDPVAIAQAGIAHAKQNGHNVVIIDTAGRLAVDEAMMTEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++ + + P E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAA+S+K V
Sbjct: 205 ANIHKAIEPQETLFVVDSMTGQDAVNTAKAFNDILNFDGVILTKLDGDTRGGAAISIKSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+ME ++ FYP RMA RILGMGDV+S VE+AQE +E+A ++QKKI
Sbjct: 265 VNKPIKFIGTGEKMEAIDVFYPSRMADRILGMGDVVSLVERAQEQFDEEEARKLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFLKQ + V +MG+M ++GMIPG K E + + K +EA+I +MTP E
Sbjct: 325 NQFGFDDFLKQIQQVKKMGNMKDLVGMIPGASKAMKGMEIE-DDAFKHIEALIHSMTPAE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
R KP ++ S R+KR+A+ +G++ Q+++QL+ Q
Sbjct: 384 RSKPSMINAS--RKKRIAKGAGRSVQEMNQLLKQF 416
>gi|227890253|ref|ZP_04008058.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus johnsonii
ATCC 33200]
gi|268319235|ref|YP_003292891.1| signal recognition particle protein [Lactobacillus johnsonii
FI9785]
gi|227849067|gb|EEJ59153.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus johnsonii
ATCC 33200]
gi|262397610|emb|CAX66624.1| signal recognition particle protein [Lactobacillus johnsonii
FI9785]
Length = 476
Score = 330 bits (847), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 173/362 (47%), Positives = 247/362 (68%), Gaps = 11/362 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L + PT+I++ GLQG GKTT KLANYL K K+ +L+AGD+YRPAA+
Sbjct: 87 MGEEAVSLNKSPHIPTIIMMVGLQGTGKTTTVGKLANYLMKNEKARPLLIAGDIYRPAAM 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+Q+ VPVY+ + ++I K GLEEA K D V++DTAGRL+ID+ +MDEL
Sbjct: 147 EQLKQIGQQLDVPVYSEDNQ-DVAEIVKHGLEEADKNKNDYVLIDTAGRLEIDEQLMDEL 205
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
K V V +P LLVVDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAALS++ V
Sbjct: 206 KRVTEVAHPDNTLLVVDAMTGQAATQVAEGFNNDLDLTGIVLTKLDGDTRGGAALSIRAV 265
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G PI G+GE++ DL F+PDRMA RILGMGD+L+ +EKAQ+ ++AE+M +K+
Sbjct: 266 TGLPIIFTGQGEKLTDLSTFHPDRMASRILGMGDMLTLIEKAQQDYDAKEAEKMAEKMRE 325
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V +MG + ++I MIPG+G PA ++ EK + ++A++ +MTP
Sbjct: 326 NTFDFNDFIDQMEQVQKMGPLDQIIKMIPGLGN-NPALKNIQIPEKQIDHIKAIVYSMTP 384
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
EERE P++L +P RR+R+A SG++ +V++++ Q Q K +M M G + L+
Sbjct: 385 EERENPDIL--NPSRRRRIAAGSGRSIAEVNRMIKQFKQ----SKEMMQKMTKGDMGELA 438
Query: 358 NL 359
NL
Sbjct: 439 NL 440
>gi|269925893|ref|YP_003322516.1| signal recognition particle protein [Thermobaculum terrenum ATCC
BAA-798]
gi|269789553|gb|ACZ41694.1| signal recognition particle protein [Thermobaculum terrenum ATCC
BAA-798]
Length = 441
Score = 330 bits (847), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 172/360 (47%), Positives = 247/360 (68%), Gaps = 7/360 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+G + +L A + PT+ +L GLQG GKTT +AKLA YL+KQG +LVA D+YRPAAI
Sbjct: 86 LGSDQCKLETASTPPTIYMLVGLQGSGKTTTAAKLALYLRKQGARPLLVAADIYRPAAIK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL LG + +PVY+ GT V P IA ++ AK+ ++ VI+DTAGRL ID+AMM EL
Sbjct: 146 QLQTLGGSLNIPVYSEGTSVPPENIATNAIDFAKQSSLTHVILDTAGRLHIDEAMMAELV 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
V+ ++PTE+LLVVDAMTGQEA + F+ +G+TG I+TKLDGD+RGGAALS++ V+
Sbjct: 206 RVRDKVSPTEILLVVDAMTGQEAVKVAEQFHNTLGVTGVIMTKLDGDARGGAALSIRAVT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK++G GER + EP PDR+A RILG+GD+L+ +E+AQ + A+E+++K+ +A
Sbjct: 266 GVPIKMIGTGERPDAFEPLIPDRLASRILGLGDMLTLIERAQAEFDERKAKELERKMRTA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK-ITPAQVREAEKSLKIMEAMIEAMTPEE 299
F DF +Q +T+ RMG +S+++ M+PG+G I ++ ++ LK +EA+I +MTPEE
Sbjct: 326 TFTLEDFYEQLQTMKRMGPLSQLLEMLPGVGSAIRRQDLQIDDRELKKVEAIILSMTPEE 385
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 359
R+ PE++ S RR+R+A SG T V+ L+ Q QM+ MK + G +P L L
Sbjct: 386 RQHPEIIKGS--RRRRIAAGSGTTVADVNALLNQFNQMQKMMKQIT----SGRIPKLPGL 439
>gi|390442802|ref|ZP_10230602.1| signal recognition particle protein [Nitritalea halalkaliphila LW7]
gi|389667445|gb|EIM78865.1| signal recognition particle protein [Nitritalea halalkaliphila LW7]
Length = 445
Score = 330 bits (847), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 172/359 (47%), Positives = 243/359 (67%), Gaps = 6/359 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG+ E + + P V+L++GLQG GKTT S KLA LKKQG+ +LVA D+YRPAAID
Sbjct: 86 MGGK-KEDINLQGDPAVVLISGLQGSGKTTFSGKLAGQLKKQGRQVLLVACDIYRPAAID 144
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+GV VY +IA + + AKK VIVDTAGRL +D+ MM E++
Sbjct: 145 QLKVLGEQIGVEVYAEPENKNALEIASRAIAHAKKTGKKTVIVDTAGRLAVDEQMMQEIE 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K+ LNP+E L VVD+MTGQ+A TF+ + G +LTKLDGD+RGGAA+S++ V
Sbjct: 205 ALKKALNPSETLFVVDSMTGQDAVNTAKTFDERLDFDGVVLTKLDGDTRGGAAISIRHVV 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK + GE+ME+++ F+PDRMA RILGMGDV+S VE+AQ+ +++A+ + KI
Sbjct: 265 NKPIKFISTGEKMENIDAFHPDRMAQRILGMGDVISLVERAQQSFDEDEAKRINAKIRKN 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F+F+DFL Q + +MG++ ++GMIPGMGK + + S K +EA+I +MTP ER
Sbjct: 325 QFNFDDFLSQLEQIKKMGNLKDLMGMIPGMGKALKG-LDIDDDSFKPIEAIIRSMTPAER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 359
E P++L S RRKR+A+ SG++ +V+ L+ Q MR MK + + GG+ AL ++
Sbjct: 384 EHPDILDGS--RRKRIAKGSGRSITEVNNLLKQFNDMRKLMKQMNKM--GGAQKALGSM 438
>gi|410030457|ref|ZP_11280287.1| signal recognition particle protein [Marinilabilia sp. AK2]
Length = 445
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 173/361 (47%), Positives = 243/361 (67%), Gaps = 9/361 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG + V K P VIL++GLQG GKTT S K A+ LK+QG+ +L A D+YRPAAID
Sbjct: 86 MGGSKVD-VNIKGDPAVILISGLQGSGKTTFSGKFASLLKRQGRQVLLAACDIYRPAAID 144
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LGEQ+GV VY +IA + +E AKK +VIVDTAGRL +D+ MM E++
Sbjct: 145 QLKVLGEQIGVEVYAEPENKNALEIASRAVEYAKKNGKKIVIVDTAGRLAVDEQMMQEIE 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K+ LNP+E L VVD+MTGQ+A TF+ + G +LTKLDGD+RGGAA+S++ V
Sbjct: 205 ALKKALNPSETLFVVDSMTGQDAVNTAKTFDERLNFDGVVLTKLDGDTRGGAAISIRHVV 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK + GE+ME+++ F+PDRMA RILGMGDV+S VE+AQ+ +++A+ + KI
Sbjct: 265 NKPIKFISTGEKMENIDVFHPDRMAQRILGMGDVISLVERAQQTFDEDEAKRLNAKIRKN 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
F+F+DFL Q + +MG++ ++GMIPGMGK + + S K +EA+I +MTP ER
Sbjct: 325 QFNFDDFLSQLEQIKKMGNIKDLVGMIPGMGKAMKG-LDIDDDSFKPVEAIIRSMTPTER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--NLMGVME---GGSLPA 355
E P+++ S RRKR+A+ SG++ +V+ L+ Q MR MK N MG + GG +P
Sbjct: 384 ENPDIIDGS--RRKRIAEGSGRSITEVNNLMKQFSDMRKMMKQMNKMGGAKRALGGMIPG 441
Query: 356 L 356
+
Sbjct: 442 M 442
>gi|168188032|ref|ZP_02622667.1| signal recognition particle protein [Clostridium botulinum C str.
Eklund]
gi|169294122|gb|EDS76255.1| signal recognition particle protein [Clostridium botulinum C str.
Eklund]
Length = 451
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 171/333 (51%), Positives = 241/333 (72%), Gaps = 2/333 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG S++ F+ TVI+L GLQG GKTT++ KLA L+K K +LVA D+YRPAAI
Sbjct: 87 MGSTESKIEFSNKGLTVIMLVGLQGAGKTTMAGKLALQLRKNNKKPLLVACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G+Q+ VPV++ G +V P IAK +E AK N +VVI+DTAGRL ID+A+M+EL+
Sbjct: 147 QLQVVGKQIDVPVFSMGDKVSPVDIAKASIEHAKNNNNNVVIIDTAGRLHIDEALMEELE 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K + P E+LLVVD+MTGQ+A + TFN ++ I+G ILTKLDGD+RGGAALS+K V+
Sbjct: 207 NIKISVEPNEILLVVDSMTGQDAVNVSETFNNKLDISGVILTKLDGDTRGGAALSIKAVT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK VG GE+M DLE F+PDRMA RILGMGDVLS +EKAQE + +E A+E+ K+++
Sbjct: 267 GKPIKYVGLGEKMNDLEVFHPDRMASRILGMGDVLSLIEKAQEAIDEEKAKELGDKMLNL 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPE 298
F+ DF + +MG ++++I M+PG+ ++ + EK +K +EAMI++MT +
Sbjct: 327 EFNLEDFKDSMAQMKKMGPLTKIIEMMPGVNSKQLQGLDLSRGEKEIKKIEAMIDSMTLK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 331
ER P L+A SP R++R+A SG QQV++L+
Sbjct: 387 ERRDPSLVAGSPSRKRRIANGSGSNVQQVNKLL 419
>gi|402494032|ref|ZP_10840779.1| signal recognition particle protein [Aquimarina agarilytica ZC1]
Length = 442
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 169/335 (50%), Positives = 231/335 (68%), Gaps = 5/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGG+ +E + P VIL++GLQG GKTT S KLA +LK K+ K +LVA DVYRPAAI
Sbjct: 86 MGGD-AEGINLSGTPAVILMSGLQGSGKTTFSGKLAQFLKNKKTKKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ++G Q+GV VY+ P +AK G+ AK +VVI+DTAGRL +D+ MM+E+
Sbjct: 145 DQLHVVGGQIGVEVYSDKENNDPVALAKAGVAHAKANGCNVVIIDTAGRLAVDEEMMNEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++ + +NP+E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAALS+K V
Sbjct: 205 SNIHKAVNPSETLFVVDSMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAALSIKSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+ME ++ FYP RMA RILGMGDV+S VEKAQE +E+A ++QKKI
Sbjct: 265 VDKPIKFIGTGEKMEAIDVFYPSRMADRILGMGDVVSLVEKAQEQFDEEEARKLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFL Q + + +MG++ ++GMIPGMGK+ + + K +EA+I +MTP E
Sbjct: 325 NQFGFDDFLSQIQQIKKMGNIKDLMGMIPGMGKMVKDV-DVDDDAFKHIEAIIHSMTPAE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
R P+++ S R+KR+ + SG + QQV+QL+ Q
Sbjct: 384 RANPQIINAS--RKKRIGKGSGTSIQQVNQLLKQF 416
>gi|335996783|ref|ZP_08562700.1| signal recognition particle protein [Lactobacillus ruminis SPM0211]
gi|417974277|ref|ZP_12615098.1| signal recognition particle protein [Lactobacillus ruminis ATCC
25644]
gi|335351853|gb|EGM53344.1| signal recognition particle protein [Lactobacillus ruminis SPM0211]
gi|346329274|gb|EGX97572.1| signal recognition particle protein [Lactobacillus ruminis ATCC
25644]
Length = 481
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 169/362 (46%), Positives = 248/362 (68%), Gaps = 10/362 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG L +K PTVI++ GLQG GKTT + KLA LKK+ + +++A DVYRPAA+
Sbjct: 87 MGESAVSLNKSKKIPTVIMMVGLQGAGKTTTAGKLAYKLKKEENARPLMIAADVYRPAAV 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+ + VPV+ GT+V P +I +QG++ A+++ D VI+DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTVGKSIDVPVFELGTDVDPVEIVRQGMKLAEEQKNDYVIIDTAGRLQIDEKLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K + +P E+LL VD+MTGQ A + FN + +TG +LTKLDGD+RGGAALS++ V
Sbjct: 207 ARIKELTHPDEILLTVDSMTGQNAVEVAQGFNDTLDVTGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK +G+GE+M L+ FYP+RMA RILGMGD+L+ +EKAQ+ Q+ AEE+ K+
Sbjct: 267 TGKPIKFIGQGEKMTALDVFYPERMASRILGMGDMLTLIEKAQQDFDQKKAEELADKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF++Q V MG + ++ MIPGM PA V+ K ++ +A++ +MTP
Sbjct: 327 NTFDFNDFIEQMEQVQNMGPIEDIMKMIPGMAN-NPALKNVKVDPKDIEHTKAIVYSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
ERE P++L +P RR+R+A SG+ Q+V++++ Q QMR ++M M G+ +
Sbjct: 386 AEREDPDML--NPSRRRRIAAGSGRPIQEVNRMIKQFKQMR----DMMQKMTNGNFGGME 439
Query: 358 NL 359
N+
Sbjct: 440 NM 441
>gi|393784555|ref|ZP_10372718.1| signal recognition particle protein [Bacteroides salyersiae
CL02T12C01]
gi|392665536|gb|EIY59060.1| signal recognition particle protein [Bacteroides salyersiae
CL02T12C01]
Length = 440
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 171/347 (49%), Positives = 236/347 (68%), Gaps = 5/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE E + K +P +IL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI
Sbjct: 86 MGGETVE-IDTKGQPAIILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +L EQ+ VP+Y+ P +IA+ ++EA+ K D+VIVDTAGRL +D+ MM E+
Sbjct: 145 EQLRVLAEQIDVPMYSEPDSKNPVEIAQNAIKEARAKGYDLVIVDTAGRLAVDEEMMKEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K + P E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 AAIKEAIQPNEILFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAALSIRSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI
Sbjct: 265 VNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTPEE
Sbjct: 325 NQFDFNDFLSQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPEE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R PE+L S RR R+A+ SG T Q+V++L+ Q Q R MK + G
Sbjct: 384 RSNPEILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|188588867|ref|YP_001920590.1| signal recognition particle protein [Clostridium botulinum E3 str.
Alaska E43]
gi|251780688|ref|ZP_04823608.1| signal recognition particle protein [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|188499148|gb|ACD52284.1| signal recognition particle protein [Clostridium botulinum E3 str.
Alaska E43]
gi|243085003|gb|EES50893.1| signal recognition particle protein [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 452
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 156/336 (46%), Positives = 241/336 (71%), Gaps = 5/336 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S++ ++ S TVI+L GLQG GKTT+ KLA L+K K +LVA DVYRPAAI
Sbjct: 87 MGGSESKINYSSSGTTVIMLVGLQGAGKTTMCGKLALELRKNNKKPLLVACDVYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL I+G+Q+ +PV++ G +V P IAK G+ K +++I+DTAGRL ID+A+M EL+
Sbjct: 147 QLEIVGKQIEIPVFSMGDKVNPVDIAKAGIAHGKDNGNNIIIIDTAGRLHIDEALMQELQ 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K +NP+E+LLVVD+MTGQ+A + +FN ++ +TG ILTKLDGD+RGGAALS++ ++
Sbjct: 207 DIKENVNPSEILLVVDSMTGQDAVNVAESFNNDLDVTGVILTKLDGDTRGGAALSIRNIT 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK +G GE++ D E F+PDRM+ RILGMGDVLS +EKAQ + +++A ++ K++++
Sbjct: 267 EKPIKYIGTGEKLSDFEVFHPDRMSSRILGMGDVLSLIEKAQSAIDEKEAADLGKRMLNQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPE 298
F+FND+L + ++G +++++ MIPGM ++ + + E ++ +++I++MT +
Sbjct: 327 EFNFNDYLTAIEQMKKLGPLNKILEMIPGMNSKELQNVDLSKGEDAINKTKSVIQSMTEK 386
Query: 299 EREKPELLAE---SPVRRKRVAQDSGKTEQQVSQLV 331
ER P LL + R+KR+A+ +G T Q+V++LV
Sbjct: 387 ERNNPHLLTSGNTASSRKKRIARGAGTTIQEVNKLV 422
>gi|251782371|ref|YP_002996673.1| signal recognition particle subunit [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
gi|242391000|dbj|BAH81459.1| signal recognition particle subunit [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
Length = 522
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 165/352 (46%), Positives = 242/352 (68%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 89 LGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAI 148
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GT+ I ++GLE+A++ D V++DTAGRLQID+ +M+EL
Sbjct: 149 DQLKTLGQQINVPVFDMGTDHLAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEEL 208
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E+
Sbjct: 209 RDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREI 268
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 269 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 328
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP
Sbjct: 329 NTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPA 388
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 389 ERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 435
>gi|408401624|ref|YP_006859587.1| signal recognition particle subunit [Streptococcus dysgalactiae
subsp. equisimilis RE378]
gi|407967852|dbj|BAM61090.1| signal recognition particle subunit [Streptococcus dysgalactiae
subsp. equisimilis RE378]
Length = 522
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 165/352 (46%), Positives = 242/352 (68%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 89 LGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAI 148
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GT+ I ++GLE+A++ D V++DTAGRLQID+ +M+EL
Sbjct: 149 DQLKTLGQQINVPVFDMGTDHLAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEEL 208
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E+
Sbjct: 209 RDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREI 268
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 269 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 328
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP
Sbjct: 329 NTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPA 388
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 389 ERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 435
>gi|404451671|ref|ZP_11016629.1| signal recognition particle protein [Indibacter alkaliphilus LW1]
gi|403762594|gb|EJZ23640.1| signal recognition particle protein [Indibacter alkaliphilus LW1]
Length = 445
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 170/347 (48%), Positives = 234/347 (67%), Gaps = 8/347 (2%)
Query: 15 PTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 74
P V+L++GLQG GKTT + K AN LKKQGK +L A D+YRPAAIDQL +LGEQVGV VY
Sbjct: 99 PAVVLISGLQGSGKTTFTGKFANLLKKQGKQVLLAACDIYRPAAIDQLKVLGEQVGVEVY 158
Query: 75 TAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLV 134
+IA + AKK +VIVDTAGRL +D+ MM E++ +K LNP+E L V
Sbjct: 159 AEPENKNALEIANNAIAHAKKSGKKIVIVDTAGRLAVDEQMMQEIEGLKNALNPSETLFV 218
Query: 135 VDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERME 194
VD+MTGQ+A TF+ + G +LTKLDGD+RGGAA+S++ V KPIK + GE+ME
Sbjct: 219 VDSMTGQDAVNTAKTFDERLNFDGVVLTKLDGDTRGGAAISIRHVVNKPIKYISTGEKME 278
Query: 195 DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTV 254
+++ F+PDRMA RILGMGDV+S VE+AQ+ +++A+ + KI F+F+DFL Q +
Sbjct: 279 NIDVFHPDRMAQRILGMGDVISLVERAQQTFDEDEAKRINSKIRKNQFNFDDFLSQLEQI 338
Query: 255 ARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRK 314
+MG++ ++GMIPGMGK + + S + +EA+I +MTP ERE P+++ S RRK
Sbjct: 339 KKMGNIKDLMGMIPGMGKAMKG-LDIDDDSFRPIEAIIRSMTPMERENPDVIDGS--RRK 395
Query: 315 RVAQDSGKTEQQVSQLVAQLFQMRVRMK--NLMGVME---GGSLPAL 356
R+A SG++ Q+V+ L+ Q MR MK N MG + GG LP +
Sbjct: 396 RIADGSGRSIQEVNNLMKQFADMRKLMKQMNKMGGAQKALGGMLPKM 442
>gi|303254469|ref|ZP_07340574.1| signal recognition particle protein [Streptococcus pneumoniae
BS455]
gi|303258923|ref|ZP_07344902.1| signal recognition particle protein [Streptococcus pneumoniae
SP-BS293]
gi|303264276|ref|ZP_07350196.1| signal recognition particle protein [Streptococcus pneumoniae
BS397]
gi|302598555|gb|EFL65596.1| signal recognition particle protein [Streptococcus pneumoniae
BS455]
gi|302639866|gb|EFL70322.1| signal recognition particle protein [Streptococcus pneumoniae
SP-BS293]
gi|302646088|gb|EFL76315.1| signal recognition particle protein [Streptococcus pneumoniae
BS397]
Length = 523
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 245/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
+G + +E++ + P +I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAI
Sbjct: 87 LGSDTAEIIKSPKIPIIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ +
Sbjct: 207 RDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTP
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 386 EERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|227513457|ref|ZP_03943506.1| signal recognition particle protein Ffh [Lactobacillus buchneri
ATCC 11577]
gi|227524600|ref|ZP_03954649.1| signal recognition particle protein Ffh [Lactobacillus hilgardii
ATCC 8290]
gi|227083330|gb|EEI18642.1| signal recognition particle protein Ffh [Lactobacillus buchneri
ATCC 11577]
gi|227088275|gb|EEI23587.1| signal recognition particle protein Ffh [Lactobacillus hilgardii
ATCC 8290]
Length = 478
Score = 330 bits (846), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 179/362 (49%), Positives = 255/362 (70%), Gaps = 10/362 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MG E L ++ PTVI+++GLQG GKTT KLA LK +Q +L+A DVYRPAAI
Sbjct: 87 MGQEAVPLNKSEKIPTVIMMSGLQGAGKTTTVGKLALKLKNEQNARPLLIADDVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL +G+QV VPV+ GT+V P +IAK+GLE+AK+ + D VI+DTAGRLQID+ +MDEL
Sbjct: 147 EQLQTVGQQVDVPVFQLGTDVDPVEIAKRGLEKAKEDHNDYVIIDTAGRLQIDEKLMDEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++K+ +NP E+LLV+DAMTGQ A A F+ + +TG +LTKLDGD+RGGAALS++ V
Sbjct: 207 GNIKKAVNPDEILLVIDAMTGQNAVATAEGFDKTLDVTGVVLTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG+GE+MEDL+ F+PDRMA RILGMGD+LS +EK Q+ Q+ AEE+ +KI
Sbjct: 267 TGKPIKFVGQGEKMEDLDVFHPDRMASRILGMGDMLSLIEKTQKEYDQKQAEELSEKIKE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTP 297
FDFNDFL Q + +MG + ++ MIPGM PA V K + ++A+I +MT
Sbjct: 327 NTFDFNDFLDQLDQIQKMGPLDEIMKMIPGMAN-NPALQNVNMNPKDMDHLKAIIYSMTE 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
+ER P+++ +P RR+R+++ SG+ Q+V++++ Q Q MK +M + G++ +
Sbjct: 386 QERTDPDVM--NPSRRRRISRGSGRPIQEVNRMIKQFGQ----MKTMMNKVSKGNMSGME 439
Query: 358 NL 359
N+
Sbjct: 440 NM 441
>gi|386316967|ref|YP_006013131.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
dysgalactiae subsp. equisimilis ATCC 12394]
gi|410494699|ref|YP_006904545.1| Signal recognition particle 54 kDa protein 2 [Streptococcus
dysgalactiae subsp. equisimilis AC-2713]
gi|417927774|ref|ZP_12571162.1| signal recognition particle protein [Streptococcus dysgalactiae
subsp. equisimilis SK1250]
gi|323127254|gb|ADX24551.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
dysgalactiae subsp. equisimilis ATCC 12394]
gi|340765648|gb|EGR88174.1| signal recognition particle protein [Streptococcus dysgalactiae
subsp. equisimilis SK1250]
gi|410439859|emb|CCI62487.1| Signal recognition particle 54 kDa protein 2 [Streptococcus
dysgalactiae subsp. equisimilis AC-2713]
Length = 520
Score = 330 bits (846), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 165/352 (46%), Positives = 242/352 (68%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GT+ I ++GLE+A++ D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTDHLAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E+
Sbjct: 207 RDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP
Sbjct: 327 NTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 387 ERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|395453961|dbj|BAM30300.1| signal recognition particle subunit [Streptococcus pyogenes M1 476]
Length = 529
Score = 330 bits (846), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 165/352 (46%), Positives = 242/352 (68%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GT+ I ++GLE+A++ + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARENHNDYVLIDTAGRLQIDEKLMGEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E+
Sbjct: 207 RDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP
Sbjct: 327 NTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 387 ERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|256545499|ref|ZP_05472861.1| signal recognition particle protein [Anaerococcus vaginalis ATCC
51170]
gi|256398895|gb|EEU12510.1| signal recognition particle protein [Anaerococcus vaginalis ATCC
51170]
Length = 445
Score = 330 bits (846), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 168/344 (48%), Positives = 244/344 (70%), Gaps = 3/344 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MG E S+L S P V+L+ GLQG GKTT S KL LKK+G++ +LVA DVYRPAAI+
Sbjct: 87 MGKENSKLELKGSTPHVVLMVGLQGSGKTTHSGKLVRKLKKEGRNPLLVALDVYRPAAIE 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G+Q V V+ G + P Q A + E A++ N DVVI+DTAGRLQID+ +MDELK
Sbjct: 147 QLKVVGKQAEVEVFEKGKQ-DPVQTANEAKEYARRNNNDVVIMDTAGRLQIDEDLMDELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K+ + P E+LLVVDAM GQE+ + TF+ + ITG ILTKLDGD+RGGAALS+++V
Sbjct: 206 NIKKAVKPDEILLVVDAMVGQESVNVAKTFDEYLDITGVILTKLDGDARGGAALSIRQVV 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKPIK +G GE+++DLE F+PDRMA RILGMGDVLS +EKA++ + +DA+E+++K+ +
Sbjct: 266 GKPIKFIGTGEKLDDLEAFHPDRMASRILGMGDVLSLIEKAEKQVTLKDAKELEEKMRNQ 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
++ +DF++Q + MG + ++ MIPG+ V EK +EA+I +MT EER
Sbjct: 326 SYTLDDFVEQINQIRNMGPLEDLLAMIPGVNNKMLKNVNVDEKGFVRIEALISSMTKEER 385
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
EKPE++ +S R++R+A+ SG ++++L+ Q +++ MK
Sbjct: 386 EKPEIIGKS--RKERIAKGSGVDMNELNKLLKQFKELKKMMKQF 427
>gi|86133270|ref|ZP_01051852.1| signal recognition 54 kDa protein (SRP54) [Polaribacter sp. MED152]
gi|85820133|gb|EAQ41280.1| signal recognition 54 kDa protein (SRP54) [Polaribacter sp. MED152]
Length = 442
Score = 330 bits (846), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 169/335 (50%), Positives = 229/335 (68%), Gaps = 5/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE + S PTVIL++GLQG GKTT S KLANYLK K+ K +LV DVYRPAAI
Sbjct: 86 MGGETVGVNLGGS-PTVILMSGLQGSGKTTFSGKLANYLKTKKSKQVLLVGCDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL ++GEQ+GV VY P +I++ ++ AK +VVI+DTAGRL +D+ MM E+
Sbjct: 145 NQLQVVGEQIGVEVYAEVGNNNPVEISQNAIKHAKANGKNVVIIDTAGRLAVDQEMMTEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++ + + P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS+K V
Sbjct: 205 SNIHKAITPQETLFVVDSMTGQDAVNTAKAFNDILNFDGVVLTKLDGDTRGGAALSIKSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+ME ++ FYPDRMA RILGMGDV+S VE+AQ+ +E+A ++QKKI
Sbjct: 265 VNKPIKFIGTGEKMEAIDVFYPDRMADRILGMGDVISLVERAQDQYDEEEARKLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFL Q + + +MGSM ++GMIPG GK V + + K +EA+I +MTP+E
Sbjct: 325 NQFGFDDFLNQIQQIKKMGSMKDLVGMIPGAGKAMK-DVDIDDDAFKGIEAIIHSMTPKE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
R P + S R+KR+A+ SG + Q+V+QL+ Q
Sbjct: 384 RSTPSTINAS--RKKRIAKGSGTSIQEVNQLMKQF 416
>gi|406658389|ref|ZP_11066529.1| signal recognition particle protein [Streptococcus iniae 9117]
gi|405578604|gb|EKB52718.1| signal recognition particle protein [Streptococcus iniae 9117]
Length = 523
Score = 330 bits (846), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 164/347 (47%), Positives = 238/347 (68%), Gaps = 4/347 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEEDARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GT+ +I +GLE A+ D V++DTAGRLQID+A+M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTDHSAIEIVTKGLELARDNRNDYVLIDTAGRLQIDEALMGEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + NP E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGDSRGGAALS++E+
Sbjct: 207 RDVKALANPNEILLVVDSMIGQEAANVADEFNKQLNITGVVLTKIDGDSRGGAALSIREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + Q+ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDQQKSMELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF+ Q V MG M ++ MIPGM G A ++ +K + A++ +MT
Sbjct: 327 NTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDDKQIARKRAIVSSMTKA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM 345
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ +M
Sbjct: 387 ERENPDLL--TPSRRRRIAAGSGNSFVEVNKFIKDFNQAKAMMQGMM 431
>gi|312865260|ref|ZP_07725488.1| signal recognition particle protein [Streptococcus downei F0415]
gi|311099371|gb|EFQ57587.1| signal recognition particle protein [Streptococcus downei F0415]
Length = 524
Score = 330 bits (846), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 166/353 (47%), Positives = 244/353 (69%), Gaps = 9/353 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIEKSPKIPTIIMMIGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GT+V ++I K GL +A++ D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQISVPVFDMGTDVPATEIVKNGLAQARENRNDYVLIDTAGRLQIDETLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+++
Sbjct: 207 RDVKELAQPNEILLVVDSMIGQEAANVAREFNQQLDITGVVLTKIDGDTRGGAALSVRQI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+G+PIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGRPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEKRSAEIAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF++Q V MG M ++ MIPGM G + ++ EK + A++ +MTPE
Sbjct: 327 NTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALSNIKVDEKDIARKRAIVSSMTPE 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM-GVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + R K +M GVM G
Sbjct: 387 ERENPDLL--NPSRRRRIASGSGNSFVEVNKFIKDFN----RAKGMMQGVMNG 433
>gi|182417247|ref|ZP_02948600.1| signal recognition particle protein [Clostridium butyricum 5521]
gi|237668219|ref|ZP_04528203.1| signal recognition particle protein [Clostridium butyricum E4 str.
BoNT E BL5262]
gi|182378893|gb|EDT76406.1| signal recognition particle protein [Clostridium butyricum 5521]
gi|237656567|gb|EEP54123.1| signal recognition particle protein [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 452
Score = 330 bits (846), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 158/333 (47%), Positives = 239/333 (71%), Gaps = 2/333 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S+L + S PTVI+L GLQG GKTT+ KLA L+K K +LVA D+YRPAAI
Sbjct: 87 MGGSESKLSYNSSGPTVIMLVGLQGAGKTTMCGKLALNLRKDNKKPLLVACDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++G+Q+ +PV++ G +V P IAK G+ A+ ++VI+DTAGRL ID+ +M ELK
Sbjct: 147 QLEVVGKQIEIPVFSMGDKVSPVDIAKAGIAHARDNGNNIVIIDTAGRLHIDEDLMQELK 206
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K + P+E+LLVVD+MTGQ+A + FN ++ ++G ILTKLDGD+RGGAALS+K +
Sbjct: 207 DIKENVKPSEILLVVDSMTGQDAVNVAENFNNDLDLSGVILTKLDGDTRGGAALSIKSII 266
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
KPIK VG GE+M D E F+PDRMA RILGMGDVLS +EKAQE + +++A ++ K++++
Sbjct: 267 NKPIKYVGLGEKMNDFEVFHPDRMASRILGMGDVLSLIEKAQEAIDEKEAADLGKRMLNQ 326
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPE 298
F+F D+L + ++G +++++ M+PGM ++ + + E ++ + +A+I +MT +
Sbjct: 327 EFNFEDYLMAMEQMKKLGPLNKILEMMPGMNSKELQGLDLEKGEVAMNVTKAIIYSMTLK 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 331
ER P L+A+S R+ R+A+ SG + Q+V++L+
Sbjct: 387 ERRNPTLIAKSNSRKIRIAKGSGTSVQEVNKLM 419
>gi|309792455|ref|ZP_07686919.1| signal recognition particle protein [Oscillochloris trichoides
DG-6]
gi|308225443|gb|EFO79207.1| signal recognition particle protein [Oscillochloris trichoides DG6]
Length = 460
Score = 330 bits (846), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 167/319 (52%), Positives = 232/319 (72%), Gaps = 4/319 (1%)
Query: 15 PTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 74
PTVI+L GLQG GKTT+SAKLA +L+K+G+ +L A D+YRPAAI QL LG+Q+G+ VY
Sbjct: 100 PTVIMLVGLQGTGKTTLSAKLALHLRKKGRRVLLAACDIYRPAAITQLESLGKQLGITVY 159
Query: 75 TAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLV 134
+ P +IA + +E AKK+ +VVIVDTAGRLQID+ +M EL+D+ + P E LLV
Sbjct: 160 SEPNSKHPPEIATRAVELAKKELYNVVIVDTAGRLQIDEPLMKELEDIDACVQPIERLLV 219
Query: 135 VDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERME 194
VDAMTGQEA + TFN + +TG ++TK+DGD+RGGAALSV+ V+G PIK + GE+++
Sbjct: 220 VDAMTGQEAVRVAETFNQRVKVTGLVMTKMDGDARGGAALSVRSVTGVPIKFISSGEKID 279
Query: 195 --DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTR 252
LE F+PDR+A RILGMGDVLS +EKA+E+ E A+ M+K++ FDF DFL
Sbjct: 280 LNTLEAFHPDRLASRILGMGDVLSLIEKAEEMYDAEQAKRMEKRLRKGKFDFEDFLSAMH 339
Query: 253 TVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVR 312
+ ++G + ++IGMIPG+ ++ + +EK LK++EA+I +MT EER PEL+ S R
Sbjct: 340 QMRKLGPLQQIIGMIPGLSQLARDEELVSEKQLKLIEAIIFSMTIEERRNPELIKGS--R 397
Query: 313 RKRVAQDSGKTEQQVSQLV 331
R+R+A+ SG + Q+VSQLV
Sbjct: 398 RERIAKGSGTSVQEVSQLV 416
>gi|94994460|ref|YP_602558.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
pyogenes MGAS10750]
gi|94547968|gb|ABF38014.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
pyogenes MGAS10750]
Length = 522
Score = 330 bits (846), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 165/352 (46%), Positives = 242/352 (68%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 89 LGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAI 148
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GT+ I ++GLE+A++ D V++DTAGRLQID+ +M+EL
Sbjct: 149 DQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEEL 208
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E+
Sbjct: 209 RDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREI 268
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 269 TGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 328
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP
Sbjct: 329 NTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKFDENQIARKRAIVSSMTPA 388
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 389 ERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 435
>gi|21910377|ref|NP_664645.1| signal recognition particle -inhibited division protein
[Streptococcus pyogenes MGAS315]
gi|21904574|gb|AAM79448.1| putative signal recognition particle -inhibited division protein
[Streptococcus pyogenes MGAS315]
Length = 520
Score = 330 bits (846), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 165/352 (46%), Positives = 242/352 (68%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIDKSPKIPTIIMMVGLQGTGKTTFAGKLANKLIKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GT+ I ++GLE+A++ D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E+
Sbjct: 207 RDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP
Sbjct: 327 NTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 387 ERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|28895953|ref|NP_802303.1| signal recognition particle [Streptococcus pyogenes SSI-1]
gi|28811203|dbj|BAC64136.1| putative signal recognition particle [Streptococcus pyogenes SSI-1]
Length = 522
Score = 330 bits (846), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 165/352 (46%), Positives = 242/352 (68%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 89 LGSETAEIDKSPKIPTIIMMVGLQGTGKTTFAGKLANKLIKEENARPLMIAADIYRPAAI 148
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GT+ I ++GLE+A++ D V++DTAGRLQID+ +M+EL
Sbjct: 149 DQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEEL 208
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E+
Sbjct: 209 RDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREI 268
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 269 TGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 328
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP
Sbjct: 329 NTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPA 388
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 389 ERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 435
>gi|386362728|ref|YP_006072059.1| signal recognition particle protein [Streptococcus pyogenes Alab49]
gi|421892475|ref|ZP_16323130.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Streptococcus pyogenes NS88.2]
gi|350277137|gb|AEQ24505.1| signal recognition particle protein [Streptococcus pyogenes Alab49]
gi|379981771|emb|CCG26852.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Streptococcus pyogenes NS88.2]
Length = 520
Score = 330 bits (846), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 165/352 (46%), Positives = 242/352 (68%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GT+ I ++GLE+A++ D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E+
Sbjct: 207 RDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP
Sbjct: 327 NTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 387 ERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|71903552|ref|YP_280355.1| signal recognition particle, subunit FFH/SRP54 [Streptococcus
pyogenes MGAS6180]
gi|71802647|gb|AAX72000.1| signal recognition particle, subunit FFH/SRP54 [Streptococcus
pyogenes MGAS6180]
Length = 522
Score = 330 bits (846), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 165/352 (46%), Positives = 242/352 (68%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 89 LGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAI 148
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GT+ I ++GLE+A++ D V++DTAGRLQID+ +M+EL
Sbjct: 149 DQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEEL 208
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E+
Sbjct: 209 RDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREI 268
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 269 TGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 328
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP
Sbjct: 329 NTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPA 388
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 389 ERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 435
>gi|295693164|ref|YP_003601774.1| signal recognition particle protein ffh [Lactobacillus crispatus
ST1]
gi|295031270|emb|CBL50749.1| Signal recognition particle protein Ffh [Lactobacillus crispatus
ST1]
Length = 476
Score = 330 bits (846), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 170/362 (46%), Positives = 251/362 (69%), Gaps = 10/362 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L +K PT+I++ GLQG GKTT KLA +L+K K+ +L+AGD+YRPAA+
Sbjct: 87 MGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGKLAYHLQKTEKARPLLIAGDIYRPAAV 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +G+Q+ VPVY+ E ++I + GL EA+K D V++DTAGRL+ID+ +M+EL
Sbjct: 147 DQLKQIGDQLKVPVYSEDGEKDVAKIVQDGLAEAEKNKNDYVLIDTAGRLEIDEPLMEEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+ VK+V +P +LLVVDAMTGQ A + F+ + +TG ILTKLDGD+RGGAALS++ V
Sbjct: 207 ERVKKVAHPDNILLVVDAMTGQAATDVAKGFDERLDVTGVILTKLDGDTRGGAALSIRAV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPI G+GE++ DL+ F+PDRMA RILGMGD+LS +EKAQ+ ++AE++ +K+
Sbjct: 267 TGKPILFTGQGEKLSDLDVFHPDRMASRILGMGDMLSLIEKAQQDYDAKEAEKVAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q + + +MG + +++ MIPG+ P + +K + EA++ +MTP
Sbjct: 327 NTFDFNDFVDQLQQIQKMGPLDQIMKMIPGLAN-NPQLKNLNVDQKQIDHTEAIVYSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALS 357
EERE P++L +P RR+R+A SG+ +V++++ Q QMR ++M M G++ LS
Sbjct: 386 EERENPDML--NPSRRRRIAAGSGRPVVEVNRMIKQFKQMR----DMMSKMSKGNMKGLS 439
Query: 358 NL 359
NL
Sbjct: 440 NL 441
>gi|209559470|ref|YP_002285942.1| signal recognition particle subunit Ffh SRP54 [Streptococcus
pyogenes NZ131]
gi|209540671|gb|ACI61247.1| Signal recognition particle, subunit Ffh SRP54 [Streptococcus
pyogenes NZ131]
Length = 520
Score = 330 bits (845), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 165/352 (46%), Positives = 242/352 (68%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEEDARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GT+ I ++GLE+A++ D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E+
Sbjct: 207 RDVKALAQPNEILLVVDSMIGQEAANIAYEFNHQLSITGVVLTKIDGDTRGGAALSVREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP
Sbjct: 327 NTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 387 ERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|160901803|ref|YP_001567384.1| signal recognition particle protein [Petrotoga mobilis SJ95]
gi|160359447|gb|ABX31061.1| signal recognition particle protein [Petrotoga mobilis SJ95]
Length = 439
Score = 330 bits (845), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 163/344 (47%), Positives = 245/344 (71%), Gaps = 4/344 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG+ + + P I+L GLQG GKT+ +AKLAN+ KK+GK+ +LVA D YRPAAID
Sbjct: 86 MGGKENNKITISRNPGFIMLTGLQGSGKTSTAAKLANFYKKKGKNPLLVAADTYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLV LGE +G+PV+T G V +I ++ + A+K D+VIVDTAGRL ID+ MM+EL+
Sbjct: 146 QLVQLGEDIGIPVFT-GDRVNALKIIEESKKYAEKLLHDIVIVDTAGRLHIDEKMMEELE 204
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
++K+++NP E+L+VVD+M GQ+A FN ++ ++G +++KLDGDSRGG +S++ ++
Sbjct: 205 NIKKLINPDEILMVVDSMVGQDAVNSAKEFNDKLDLSGFVVSKLDGDSRGGVIISIRYIT 264
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
GKP+KLVG GE+++DLE FYPDR GRILGMGDVLSF+EK ++ + ++ AEE ++ M
Sbjct: 265 GKPVKLVGVGEKIDDLEEFYPDRYVGRILGMGDVLSFIEKVEQDIDKKKAEEDAERFMDG 324
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 300
FD DFL+Q R + ++G +S ++ M+PG+ K V + E+ LK EA+I +MTP+ER
Sbjct: 325 KFDLKDFLEQIRQIRKLGPLSSLLEMVPGVPK-EQVDVTKGEQELKKFEAIINSMTPKER 383
Query: 301 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 344
+ P +L S R++R+A+ SG T Q +++L+ Q++ MK +
Sbjct: 384 KNPGILTYS--RKQRIAKGSGTTLQDINRLLKSYDQLKKTMKQM 425
>gi|417753165|ref|ZP_12401305.1| signal recognition particle protein [Streptococcus dysgalactiae
subsp. equisimilis SK1249]
gi|333770647|gb|EGL47657.1| signal recognition particle protein [Streptococcus dysgalactiae
subsp. equisimilis SK1249]
Length = 520
Score = 330 bits (845), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 165/352 (46%), Positives = 242/352 (68%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GT+ I ++GLE+A++ D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTDHLAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E+
Sbjct: 207 RDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP
Sbjct: 327 NTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 387 ERENPDLL--NPSRRRRIAAGSGNSFVKVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|229495294|ref|ZP_04389029.1| signal recognition particle protein [Porphyromonas endodontalis
ATCC 35406]
gi|229317737|gb|EEN83635.1| signal recognition particle protein [Porphyromonas endodontalis
ATCC 35406]
Length = 442
Score = 330 bits (845), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 179/355 (50%), Positives = 240/355 (67%), Gaps = 8/355 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAI 59
MGGE EL S P V+L++GLQG GKTT S KLA LK Q K+ +LVA DVYRPAAI
Sbjct: 86 MGGEAVELRLQGS-PAVVLMSGLQGSGKTTFSGKLAKLLKTQRHKNPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +LGEQ+ +PVY KP QIA++G+ A++ DVVIVDTAGRL +D+ MM E+
Sbjct: 145 DQLKVLGEQLNIPVYAEEDNKKPVQIAERGITYAREHGHDVVIVDTAGRLAVDEEMMQEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+K +NP EVL VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 205 AAIKAAINPDEVLFVVDSMTGQDAVNTAKEFNDRLDFGGVVLTKLDGDTRGGAALSIRTV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK VG GE M+ L+ F+P+RMA RILGMGD++S VE+AQ+ +++A ++++I
Sbjct: 265 VTKPIKFVGTGEGMDALDVFHPERMADRILGMGDIVSLVERAQQQYDEQEARRLEQRIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
FDFNDFLKQ + +MG++ ++ MIPG+GK + + + K +EA+I +MTPEE
Sbjct: 325 DQFDFNDFLKQIHQIKKMGNIRDLVSMIPGVGK-AIKDIDIDDDAFKGIEAIIYSMTPEE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 354
R P LL + RRKR+A+ SG T Q V++L+ Q Q R MK + + GS P
Sbjct: 384 RAHPSLL--NGQRRKRIAKGSGTTVQDVNKLITQFDQARKMMKTVQAM---GSNP 433
>gi|94544046|gb|ABF34094.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
pyogenes MGAS10270]
Length = 522
Score = 330 bits (845), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 165/352 (46%), Positives = 242/352 (68%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 89 LGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAI 148
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GT+ I ++GLE+A++ D V++DTAGRLQID+ +M+EL
Sbjct: 149 DQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEEL 208
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E+
Sbjct: 209 RDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREI 268
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 269 TGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 328
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP
Sbjct: 329 NTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPA 388
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 389 ERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 435
>gi|81428329|ref|YP_395329.1| Signal recognition particle protein Ffh [Lactobacillus sakei subsp.
sakei 23K]
gi|78609971|emb|CAI55018.1| Signal recognition particle protein Ffh [Lactobacillus sakei subsp.
sakei 23K]
Length = 478
Score = 330 bits (845), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 168/348 (48%), Positives = 236/348 (67%), Gaps = 10/348 (2%)
Query: 15 PTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPV 73
PT+I++ GLQG GKTT + KLA YL K K+ +++A D+YRPAAIDQL +GEQVG PV
Sbjct: 101 PTIIMMVGLQGAGKTTTAGKLATYLIKNEKARPLMIAADIYRPAAIDQLKTVGEQVGAPV 160
Query: 74 YTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLL 133
+ GT+V P +I +QGL +A + D V++DTAGRLQID+A+M EL D+ + P E LL
Sbjct: 161 FEMGTDVNPVEIVRQGLAQAALQKNDYVLIDTAGRLQIDEALMQELADINDLARPNETLL 220
Query: 134 VVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERM 193
VDAMTGQ A + FN + ITG +LTKLDGD+RGGAALS++ V+GKPIK G+GE++
Sbjct: 221 TVDAMTGQAAVDVAEGFNSRLDITGVVLTKLDGDTRGGAALSIRAVTGKPIKFTGQGEKL 280
Query: 194 EDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRT 253
L+ FYPDRM+ RILGMGD+LS +EKAQE ++ A +M +KI +FDFNDFL Q
Sbjct: 281 NQLDVFYPDRMSSRILGMGDMLSLIEKAQEDYDEQKAVDMAEKIKENSFDFNDFLDQMDQ 340
Query: 254 VARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPV 311
+ MG + ++ MIPGM P ++ K + M+A++++MTP+ERE P+LL +P
Sbjct: 341 LQNMGPLEDIMKMIPGMAN-NPQLKNIKMDPKDMTHMKAIVQSMTPQERENPDLL--NPS 397
Query: 312 RRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 359
RR+R+A +G+ +V++++ Q Q K +M M G+ + L
Sbjct: 398 RRRRLAAGAGRPIVEVNRMIKQFNQ----SKKMMNQMSKGNFNGMEGL 441
>gi|375150217|ref|YP_005012658.1| signal recognition particle subunit FFH/SRP54 (srp54) [Niastella
koreensis GR20-10]
gi|361064263|gb|AEW03255.1| signal recognition particle subunit FFH/SRP54 (srp54) [Niastella
koreensis GR20-10]
Length = 438
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/337 (51%), Positives = 233/337 (69%), Gaps = 5/337 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGK-SCMLVAGDVYRPAAI 59
MGG SE AK P VIL+AGLQG GKTT SAKLAN+LK +G+ S MLVA D+YRPAAI
Sbjct: 86 MGGSESEFN-AKGNPAVILIAGLQGSGKTTFSAKLANFLKTRGRLSPMLVAADIYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL +LGEQ+ V VY+ QIA ++EA+ KN +VVI+DTAGRL ID+AMM E+
Sbjct: 145 DQLKVLGEQIQVDVYSEPENKNAVQIASNAIKEARSKNKNVVIIDTAGRLAIDEAMMTEV 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+VK +NP E+L VVD+MTGQ+A FN + TG +LTKLDGD+RGGAALS+K
Sbjct: 205 ANVKSAVNPNEILFVVDSMTGQDAVNTAKAFNDRLDFTGVVLTKLDGDTRGGAALSIKYT 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK V GE+++ L+ FYP+RMA RILGMGD+ + VEKAQ+ +E A +++KKI
Sbjct: 265 VQKPIKFVSSGEKLDTLDVFYPERMAQRILGMGDITTLVEKAQQQFDEEQARKLEKKIRK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F+F DF +Q + +MG++ ++GMIPG+GK + ++ + K +EAMI +MT +E
Sbjct: 325 NQFNFEDFKQQLEQIKKMGNIKDLLGMIPGVGKAIK-DIDISDDAFKGIEAMINSMTKQE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 336
RE P+L+ R++R+A+ SGK +V+ + Q Q
Sbjct: 384 REDPDLINMG--RKQRIAKGSGKGLDEVNAFLKQFEQ 418
>gi|167630250|ref|YP_001680749.1| signal recognition particle protein [Heliobacterium modesticaldum
Ice1]
gi|167592990|gb|ABZ84738.1| signal recognition particle protein [Heliobacterium modesticaldum
Ice1]
Length = 454
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 167/339 (49%), Positives = 241/339 (71%), Gaps = 3/339 (0%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S+L + PTV++L GLQG GKTT +KL +L+KQG+ +LVA DVYRPAA+
Sbjct: 86 MGGTSSKLTLSPKPPTVVMLVGLQGAGKTTTVSKLGLFLRKQGRRPLLVACDVYRPAAVK 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL +LG Q+ +PV++ GT V P IAK +E A D+V++DTAGRL I++ +M+ELK
Sbjct: 146 QLQVLGNQLDLPVFSMGTGVSPVDIAKGAVEHAVAHGRDMVLLDTAGRLHINEELMEELK 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K + P E+LLVVDAMTGQ+A + +F+ ++G+ G ILTKLDGD+RGGAALSVK V+
Sbjct: 206 SIKSAVRPHEILLVVDAMTGQDAVNVAESFHGQLGLDGVILTKLDGDARGGAALSVKAVT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G PIK G GE+ + LE F+PDRMA RILGMGDVL+ +EKAQ + + A++M++++ A
Sbjct: 266 GCPIKFAGMGEKPDALEQFHPDRMASRILGMGDVLTLIEKAQASIDAQVAKDMEQRLRKA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEE 299
F DFL Q + + +MG + +++GM+PGM K+ + V+ +K +K +EA+I +MTPEE
Sbjct: 326 EFTLEDFLVQIQQMKKMGPLDQLMGMMPGMNKMKALKGVQIDDKDMKHVEAIILSMTPEE 385
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 338
R P++L +S R++R+A+ SG + QQV+ L+ Q R
Sbjct: 386 RRNPQILKDS--RKRRIARGSGTSVQQVNNLLKTFEQTR 422
>gi|422758876|ref|ZP_16812638.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
dysgalactiae subsp. dysgalactiae ATCC 27957]
gi|322411711|gb|EFY02619.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
dysgalactiae subsp. dysgalactiae ATCC 27957]
Length = 520
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 165/352 (46%), Positives = 242/352 (68%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GT+ I ++GLE+A++ D V++DTAGRLQID+ +M+EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E+
Sbjct: 207 RDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKYTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP
Sbjct: 327 NTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANMKVDENQIARKRAIVSSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 387 ERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|320530761|ref|ZP_08031805.1| signal recognition particle protein [Selenomonas artemidis F0399]
gi|320137048|gb|EFW28986.1| signal recognition particle protein [Selenomonas artemidis F0399]
Length = 458
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 179/363 (49%), Positives = 252/363 (69%), Gaps = 7/363 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S L + + PTVI+L GLQG GKTT + KLA LKKQGK +LVA D+YRPAAI
Sbjct: 87 MGGTESRLNISPNPPTVIMLVGLQGSGKTTSAGKLALMLKKQGKRPLLVADDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++GE+VGVPV++ G E IA+ + + DVVI+DTAGRLQID+ +M EL+
Sbjct: 147 QLEVIGEKVGVPVFSQGQE-DAVAIARASIAYSAAHANDVVIIDTAGRLQIDETLMQELR 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K + P E+LLVVDAMTGQEA + F+ +G+ G ++TKLDGD+RGGAALS+K V+
Sbjct: 206 DIKAAVQPHEILLVVDAMTGQEAVNVAAAFDASLGLDGIVMTKLDGDARGGAALSIKAVT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G+P+K VG GE+++ LE F+PDRMA RILGMGDVLS VEKAQE E+A++M++K+
Sbjct: 266 GRPVKFVGMGEKLDPLEVFHPDRMASRILGMGDVLSLVEKAQENFDIENAKKMEEKLRKN 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEAMIEAMT 296
+F +DFL+Q + + ++GS++ ++GMIPGMG K+ ++ K ++ +EA+I AMT
Sbjct: 326 DFTLDDFLEQMQQIKKLGSLNNILGMIPGMGGLKKKLGDQELDLDGKEMRRLEAIIRAMT 385
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 356
P+ER ++ S RRKR+A SG Q V++L+ Q +MR MK + + G +P +
Sbjct: 386 PKERADITIINGS--RRKRIAAGSGTRVQDVNKLLKQFGEMRKMMKKMNQMKGKGKMPKM 443
Query: 357 SNL 359
+L
Sbjct: 444 PSL 446
>gi|300172914|ref|YP_003772079.1| signal recognition particle protein [Leuconostoc gasicomitatum LMG
18811]
gi|299887292|emb|CBL91260.1| Signal recognition particle protein [Leuconostoc gasicomitatum LMG
18811]
Length = 489
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 173/345 (50%), Positives = 232/345 (67%), Gaps = 6/345 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E + L + PT+I++AGLQG GKTT AKLA LKK+ + +L+A DVYRPAAI
Sbjct: 87 MGEEAAPLNKSPKIPTIIMMAGLQGAGKTTTVAKLAYKLKKEENARPLLIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ILG + +PV+ GT V P +I +QGL +A + D V +DTAGRLQID +M EL
Sbjct: 147 DQLEILGRDLEIPVFQLGTAVNPREIVRQGLAKAAENKNDYVFIDTAGRLQIDDVLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
KDV + +P E+LL VDAMTGQ AA F+ + +TG +LTKLDGD+RGGAALS+++V
Sbjct: 207 KDVAEIAHPDEILLTVDAMTGQNAAETAKGFSAALDLTGVVLTKLDGDTRGGAALSIRDV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG+GE+ DL+ FYPDRMA RILGMGDVL+ +EKAQ +E + +K+
Sbjct: 267 TGKPIKFVGQGEKPTDLDVFYPDRMASRILGMGDVLTLIEKAQRDFDEEAQAKQLEKMRQ 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q + V MG M ++ MIPGM P A V K +EA++ +MTP
Sbjct: 327 NTFDFNDFVAQLKQVQSMGPMEDLLKMIPGMAN-NPALANVNIDAKQFSHLEAIVNSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 342
ERE P+L+ +P RR+R+A +G+ +V++++ Q QMR M
Sbjct: 386 AEREDPDLI--NPSRRRRLAAGAGRPIIEVNRMIKQFDQMRKMMN 428
>gi|71910728|ref|YP_282278.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
pyogenes MGAS5005]
gi|410680584|ref|YP_006932986.1| signal recognition particle protein [Streptococcus pyogenes A20]
gi|71853510|gb|AAZ51533.1| signal recognition particle, subunit FFH/SRP54 [Streptococcus
pyogenes MGAS5005]
gi|409693173|gb|AFV38033.1| signal recognition particle protein [Streptococcus pyogenes A20]
Length = 520
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 165/352 (46%), Positives = 242/352 (68%), Gaps = 7/352 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 59
+G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAI
Sbjct: 87 LGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL LG+Q+ VPV+ GT+ I ++GLE+A++ + D V++DTAGRLQID+ +M EL
Sbjct: 147 DQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARENHNDYVLIDTAGRLQIDEKLMGEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E+
Sbjct: 207 RDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREI 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+
Sbjct: 267 TGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRE 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPE 298
FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP
Sbjct: 327 NTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPA 386
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 350
ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 387 ERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|357057488|ref|ZP_09118348.1| signal recognition particle protein [Selenomonas infelix ATCC
43532]
gi|355375392|gb|EHG22679.1| signal recognition particle protein [Selenomonas infelix ATCC
43532]
Length = 458
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 176/342 (51%), Positives = 238/342 (69%), Gaps = 7/342 (2%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
MGG S L + + PTVI+L GLQG GKTT + KLA LKKQGK +LVA D+YRPAAI
Sbjct: 87 MGGTESRLNISPNPPTVIMLVGLQGSGKTTSAGKLALMLKKQGKRPLLVADDIYRPAAIK 146
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QL ++GE+V VPV++ G E IA+ + + DVVI+DTAGRLQID+ +M EL+
Sbjct: 147 QLEVIGEKVEVPVFSQGQE-DAVAIARAAIGHSASHANDVVIIDTAGRLQIDETLMQELR 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
D+K + P E+LLVVDAMTGQEA + +F+ +G+ G I+TKLDGD+RGGAALS+K V+
Sbjct: 206 DIKAAVKPHEILLVVDAMTGQEAVNVAQSFDESLGLDGVIMTKLDGDARGGAALSIKAVT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G P+K VG GE++E LE F+PDRMA RILGMGDVLS VEKAQE E+A++M+ K+
Sbjct: 266 GCPVKFVGMGEKLEPLEVFHPDRMASRILGMGDVLSLVEKAQENFDLENAKKMEAKLRKN 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEAMIEAMT 296
+F +DFL Q + V ++GS++ ++GMIPGMG K+ + K ++ +EA+I AMT
Sbjct: 326 DFTLDDFLDQLQQVKKLGSLNSILGMIPGMGNLKKKLGDQEFDLDGKEMRQLEAIIRAMT 385
Query: 297 PEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 338
P+ER ++ S RRKR+A SG Q V++L+ Q +MR
Sbjct: 386 PKERADITIINGS--RRKRIAAGSGTRVQDVNKLLKQFGEMR 425
>gi|284045135|ref|YP_003395475.1| signal recognition particle protein [Conexibacter woesei DSM 14684]
gi|283949356|gb|ADB52100.1| signal recognition particle protein [Conexibacter woesei DSM 14684]
Length = 444
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/360 (47%), Positives = 241/360 (66%), Gaps = 7/360 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAG-DVYRPAAI 59
MGGE +EL F+ S PTVIL+AGLQG GKTT +AKLA L++Q +S + VA DVYRPAA+
Sbjct: 86 MGGESAELRFSSSPPTVILMAGLQGSGKTTATAKLARLLREQNRSSVAVAACDVYRPAAV 145
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL+ +G + G VY GT+ P +IAK E A+++ DV+IVDTAGRL +D+ +M EL
Sbjct: 146 EQLITVGARAGADVYERGTDADPVEIAKWARERAEREGKDVLIVDTAGRLHVDENLMKEL 205
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++KRV NPT VLLVVDAMTGQ+A + F + G +++KLDGD+RGGAALSVK V
Sbjct: 206 AEIKRVTNPTNVLLVVDAMTGQDAVNVAEQFAEVVQFDGVVMSKLDGDARGGAALSVKSV 265
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPI GE+++ E F+PDRMA RILGMGDV++ +EKA+ + A+E+++KI
Sbjct: 266 TGKPILFASTGEKLDQFERFHPDRMAQRILGMGDVMTLIEKAESQFDETQAKELERKIRK 325
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
+ F +DFL Q R V R+G + ++GM+PG+G +R E+ ++A+I +MT EE
Sbjct: 326 SEFGLDDFLDQLRQVRRLGPLQSLLGMMPGLGGHQLRNLRVDEREFDRIQAIILSMTAEE 385
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 359
R P+++ S RR R+A+ SG Q V L+ Q Q M+ LM M+ G +P + L
Sbjct: 386 RRNPDIIKGS--RRIRIARGSGTNVQAVKALIRQFGQ----MQRLMKSMQSGKMPDIGAL 439
>gi|120603184|ref|YP_967584.1| signal recognition particle protein [Desulfovibrio vulgaris DP4]
gi|120563413|gb|ABM29157.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfovibrio vulgaris DP4]
Length = 508
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/358 (47%), Positives = 244/358 (68%), Gaps = 6/358 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID 60
+GG +EL ++P VI++ GLQG GKTT SAK+AN L+K+ LV DVYRPAAID
Sbjct: 86 LGGGTTELDLRGAQPGVIMMVGLQGSGKTTSSAKIANLLRKRKMRPYLVPVDVYRPAAID 145
Query: 61 QLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELK 120
QLV L Q+ +P Y + ++KP I + L +AK+K V++DTAGRL +D+A+MDEL
Sbjct: 146 QLVTLARQLDIPYYQSTPDMKPLDIVRAALADAKEKQCTAVLLDTAGRLHVDEALMDELA 205
Query: 121 DVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 180
+K +P E+L V DAMTGQ+A + FN ++GITG +LTK+DGD+RGGAALS+K V+
Sbjct: 206 ALKATFSPQEILFVADAMTGQDAVTVADAFNEKLGITGVVLTKMDGDARGGAALSIKSVT 265
Query: 181 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 240
G +K VG GE++ D+E F+PDR+AGRILGMGD+L+ +EKAQ ++ ++AE + KK A
Sbjct: 266 GASVKYVGIGEKLSDIEVFHPDRVAGRILGMGDMLTLIEKAQSTIEADEAEALTKKFQRA 325
Query: 241 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPE 298
+FD DF Q R + ++GS+ ++ MIPGMG + Q+ EK + +EA+I +MT +
Sbjct: 326 SFDLEDFRTQMRRMKKLGSLEGILKMIPGMGALRDKLGQMSVPEKDMARIEAIISSMTMK 385
Query: 299 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME--GGSLP 354
ER P+++ S RR R+A+ SG T Q+V+QL+ QMR MK +M + + GG +P
Sbjct: 386 ERRNPDVINGS--RRARIAKGSGTTVQEVNQLLRNFEQMREMMKRVMNMGKPGGGRMP 441
>gi|326692469|ref|ZP_08229474.1| signal recognition particle protein [Leuconostoc argentinum KCTC
3773]
Length = 491
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 179/369 (48%), Positives = 245/369 (66%), Gaps = 13/369 (3%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAI 59
MG E L ++ PT+I++AGLQG GKTT AKLA LK + K+ +L+A DVYRPAAI
Sbjct: 87 MGEEAVPLNKSQKIPTIIMMAGLQGAGKTTTVAKLAYKLKTEEKARPLLIAADVYRPAAI 146
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ILG + +PV+ GT+V P +I +QGL +A + D V +DTAGRLQID+ +M EL
Sbjct: 147 DQLEILGRDLDIPVFQLGTDVDPREIVRQGLAKAAENKNDYVFIDTAGRLQIDEVLMQEL 206
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
KDV + P E+LL VDAMTGQ AA F + +TG +LTKLDGD+RGGAALS+++V
Sbjct: 207 KDVAEIAQPDEILLTVDAMTGQNAAETAKGFAEALDLTGVVLTKLDGDTRGGAALSIRDV 266
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
+GKPIK VG+GE+ DL+ FYPDRMA RILGMGDVL+ +EKAQ +E+ + +K+
Sbjct: 267 TGKPIKFVGQGEKPTDLDVFYPDRMASRILGMGDVLTLIEKAQRDFDEEEQAKQLEKMRQ 326
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTP 297
FDFNDF+ Q + V +MG M ++ MIPGM P A + K +EA++ +MTP
Sbjct: 327 NTFDFNDFVSQLKQVQKMGPMEDLLKMIPGMAN-NPALANLNIDAKQFAHLEAIVNSMTP 385
Query: 298 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-----NLMGV--MEG 350
ERE P+L+ +P RR+R+A +G+ +V++++ Q QMR M N G+ M G
Sbjct: 386 AERENPDLI--NPSRRRRLAAGAGRPIVEVNRMIKQFDQMRKMMNQATNGNFGGIDKMLG 443
Query: 351 GSLPALSNL 359
G+ +S+L
Sbjct: 444 GAGMDMSSL 452
>gi|298207766|ref|YP_003715945.1| signal recognition particle protein [Croceibacter atlanticus
HTCC2559]
gi|83850404|gb|EAP88272.1| signal recognition particle protein [Croceibacter atlanticus
HTCC2559]
Length = 442
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/335 (50%), Positives = 233/335 (69%), Gaps = 5/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGEV E + P++IL++GLQG GKTT S KLAN+LK K+ K +LVA D+YRPAAI
Sbjct: 86 MGGEV-EGINLSGNPSIILMSGLQGSGKTTFSGKLANFLKNKKTKKPLLVACDIYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
+QL ++GEQ+GV V++ P I+K + AK+ +VVI+DTAGRL +D+AMM E+
Sbjct: 145 NQLHVVGEQIGVEVFSDEGNQDPVAISKAAIAHAKQNGHNVVIIDTAGRLAVDEAMMTEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++ + + P E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAA+S+K V
Sbjct: 205 SNIHKAIQPQETLFVVDSMTGQDAVNTAKAFNDTLNFDGVILTKLDGDTRGGAAISIKSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+M+ ++ FYP RMA RILGMGDV+S VE+AQE +E+A ++QKKI
Sbjct: 265 VDKPIKFIGTGEKMDAIDVFYPSRMADRILGMGDVVSLVERAQEQYDEEEARKLQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFLKQ + V +MGSM ++GMIPG GK + + + K +EA+I +MTPEE
Sbjct: 325 NQFGFDDFLKQIQQVKKMGSMKDLMGMIPGAGK-MMKDIDIDDDAFKGIEAIIHSMTPEE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
R P ++ S R+KRVA+ SG + Q+V+QL+ Q
Sbjct: 384 RSNPSIINSS--RKKRVAKGSGTSVQEVNQLLKQF 416
>gi|225010553|ref|ZP_03701024.1| signal recognition particle protein [Flavobacteria bacterium
MS024-3C]
gi|225005382|gb|EEG43333.1| signal recognition particle protein [Flavobacteria bacterium
MS024-3C]
Length = 445
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 171/335 (51%), Positives = 234/335 (69%), Gaps = 5/335 (1%)
Query: 1 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAI 59
MGGE L A + P++IL+AGLQG GKTT S KLA YLK K+ K+ +LVA DVYRPAAI
Sbjct: 86 MGGESVGLNLADN-PSIILMAGLQGSGKTTFSGKLALYLKSKKSKNPLLVACDVYRPAAI 144
Query: 60 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 119
DQL ++G+Q+GV VY+ E P IA+ G+ AK ++VI+DTAGRL +D+AMM E+
Sbjct: 145 DQLQVVGDQIGVAVYSNKEESNPVAIAQAGIAHAKANGHNLVIIDTAGRLAVDEAMMAEI 204
Query: 120 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 179
++ + + P+E L VVDAMTGQ+A F+ + G ILTKLDGD+RGGAA+S+K V
Sbjct: 205 ANIHKAITPSETLFVVDAMTGQDAVNTAKAFHDVLNFDGVILTKLDGDTRGGAAISIKSV 264
Query: 180 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 239
KPIK +G GE+ME L+ FYP+RMA RILGMGDV+S VE+AQ+ +E+A ++QKKI
Sbjct: 265 VTKPIKFIGTGEKMEALDVFYPERMADRILGMGDVVSLVERAQDQFDEEEARKIQKKIAK 324
Query: 240 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEE 299
F F+DFL Q + + +MG++ ++GMIPG GK + + + K +EA+I +MTP E
Sbjct: 325 NTFGFDDFLTQIQQIKKMGNLKDLMGMIPGAGKALKG-LDIDDDAFKHIEAIIHSMTPLE 383
Query: 300 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 334
R +P L S R+KR+A+ SG+T Q V+QL+ Q
Sbjct: 384 RSQPTRLDAS--RKKRIAKGSGRTIQDVNQLLKQF 416
>gi|339634031|ref|YP_004725672.1| signal recognition particle protein [Weissella koreensis KACC
15510]
gi|420161374|ref|ZP_14668139.1| signal recognition particle protein Ffh [Weissella koreensis KCTC
3621]
gi|420161511|ref|ZP_14668275.1| signal recognition particle protein Ffh [Weissella koreensis KCTC
3621]
gi|338853827|gb|AEJ22993.1| signal recognition particle protein [Weissella koreensis KACC
15510]
gi|394745049|gb|EJF33945.1| signal recognition particle protein Ffh [Weissella koreensis KCTC
3621]
gi|394745351|gb|EJF34235.1| signal recognition particle protein Ffh [Weissella koreensis KCTC
3621]
Length = 491
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 167/334 (50%), Positives = 232/334 (69%), Gaps = 4/334 (1%)
Query: 15 PTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAIDQLVILGEQVGVPV 73
PTVI++ GLQG GKTT + KLA LKK Q +++A D+YRPAAIDQL LG+Q+ VPV
Sbjct: 101 PTVIMMVGLQGAGKTTTAGKLAFKLKKEQNARPLMIAADIYRPAAIDQLETLGQQIDVPV 160
Query: 74 YTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLL 133
++ GT V P +I KQGL +A++ D V +D AGRLQID+A+M EL DVK + P E+LL
Sbjct: 161 FSMGTNVDPREIVKQGLAKAEELKSDYVFIDAAGRLQIDEALMQELADVKEIAQPDEILL 220
Query: 134 VVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERM 193
VVDAMTGQ A T FN +GITG +LTKLDGD+RGGAALS++ ++ KPIK VG+GE+M
Sbjct: 221 VVDAMTGQNATETATGFNDRLGITGVVLTKLDGDTRGGAALSIRAITNKPIKFVGQGEKM 280
Query: 194 EDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRT 253
DL+ FYP+RMA RILGMGD+++ +EKAQ+ + ++ A E +K+ FDFNDF+ Q
Sbjct: 281 TDLDVFYPERMASRILGMGDLMTLIEKAQKDVDEKKAAEQAEKMRQNTFDFNDFIDQMDQ 340
Query: 254 VARMGSMSRVIGMIPGMGKITPAQVREAE-KSLKIMEAMIEAMTPEEREKPELLAESPVR 312
V MG + ++ MIPGM Q + + K + M+A++ +MTP ERE P+L+ +P R
Sbjct: 341 VQNMGPLEDLMKMIPGMANNPALQNMQMDPKQIDHMKAIVLSMTPAEREDPDLI--NPSR 398
Query: 313 RKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 346
R+R+A +G+ +V++++ Q QM+ M M
Sbjct: 399 RRRLAAGAGRPIVEVNRMIKQFNQMKGMMSKAMN 432
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.132 0.354
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,871,802,320
Number of Sequences: 23463169
Number of extensions: 240306132
Number of successful extensions: 934998
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9957
Number of HSP's successfully gapped in prelim test: 1964
Number of HSP's that attempted gapping in prelim test: 903450
Number of HSP's gapped (non-prelim): 13612
length of query: 403
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 258
effective length of database: 8,957,035,862
effective search space: 2310915252396
effective search space used: 2310915252396
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 78 (34.7 bits)