Query 015661
Match_columns 403
No_of_seqs 129 out of 428
Neff 6.7
Searched_HMMs 13730
Date Mon Mar 25 16:29:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015661.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015661hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wkqa_ c.97.1.2 (A:) Guanine 78.7 2.7 0.0002 34.3 7.4 15 74-88 54-68 (158)
2 d2g84a1 c.97.1.2 (A:1-189) Put 71.2 3.7 0.00027 34.6 6.5 43 35-88 48-90 (189)
3 d1wwra1 c.97.1.2 (A:1-151) tRN 63.4 11 0.00082 30.0 7.7 15 131-145 73-87 (151)
4 d1p6oa_ c.97.1.2 (A:) Cytosine 42.7 16 0.0012 29.3 5.3 15 131-145 80-94 (156)
5 d2a8na1 c.97.1.2 (A:2-131) Cyt 29.0 15 0.0011 28.5 2.7 15 131-145 73-87 (130)
6 d2cqea1 g.66.1.1 (A:458-513) Z 25.0 25 0.0018 23.3 2.8 28 54-81 8-35 (56)
7 d1qr0a1 d.150.1.1 (A:1-101) 4' 22.8 28 0.002 25.4 3.1 52 72-137 39-90 (101)
8 d1bdsa_ g.9.1.1 (A:) BDs-I def 22.4 11 0.00077 23.0 0.4 8 188-195 8-15 (43)
9 d2b3ja1 c.97.1.2 (A:1-151) tRN 18.9 38 0.0028 26.4 3.4 14 131-144 74-87 (151)
10 d1nbja_ g.3.3.2 (A:) Cycloviol 16.0 7.6 0.00056 22.1 -1.2 10 197-206 16-25 (30)
No 1
>d1wkqa_ c.97.1.2 (A:) Guanine deaminase GuaD {Bacillus subtilis [TaxId: 1423]}
Probab=78.72 E-value=2.7 Score=34.35 Aligned_cols=15 Identities=33% Similarity=0.503 Sum_probs=11.8
Q ss_pred hHHHHHHHHHHHHHH
Q 015661 74 SHAEIVARRALLRFF 88 (403)
Q Consensus 74 ~HAEVlARR~f~r~L 88 (403)
.|||++|.|...+-|
T Consensus 54 ~HAE~~ai~~a~~~~ 68 (158)
T d1wkqa_ 54 AHAEVTAIRKACKVL 68 (158)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHhc
Confidence 599999998765544
No 2
>d2g84a1 c.97.1.2 (A:1-189) Putative deaminase NE0047 {Nitrosomonas europaea [TaxId: 915]}
Probab=71.17 E-value=3.7 Score=34.56 Aligned_cols=43 Identities=26% Similarity=0.246 Sum_probs=22.9
Q ss_pred EEEEEEeeCCCCeEEEEEecCCCcccCCccCCCCCcccchHHHHHHHHHHHHHH
Q 015661 35 LAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFF 88 (403)
Q Consensus 35 LA~iV~~~~~~~~~vvslgTG~Kc~~~~~l~~~G~~lhD~HAEVlARR~f~r~L 88 (403)
++|+|+.. ++-+||+-|.-. .. .+|+... ||||+|.|-.-+.+
T Consensus 48 ~GaviV~~--~~g~Iia~g~N~-~~------~~~dpt~--HAEi~AI~~A~~~~ 90 (189)
T d2g84a1 48 FAAAVFER--DSGLLIAAGTNR-VV------PGRCSAA--HAEILALSLAQAKL 90 (189)
T ss_dssp CEEEEEET--TTCBEEEEEECC-TT------TTTCTTC--CHHHHHHHHHHHHH
T ss_pred EEEEEEEC--CCCEEEEEEcCC-cC------cCCCCcc--cHHHHHHHHHHHHh
Confidence 35555432 345888876432 11 1222211 99999987654443
No 3
>d1wwra1 c.97.1.2 (A:1-151) tRNA adenosine deaminase TadA {Aquifex aeolicus [TaxId: 63363]}
Probab=63.40 E-value=11 Score=30.00 Aligned_cols=15 Identities=33% Similarity=0.560 Sum_probs=11.6
Q ss_pred EEEEeccCCCCcccc
Q 015661 131 LHLYISQLPCGDASL 145 (403)
Q Consensus 131 lhLYiS~~PCGDAsi 145 (403)
.-||+|-.||--++.
T Consensus 73 ~tlY~TlEPC~mC~~ 87 (151)
T d1wwra1 73 CELYVTLEPCIMCSY 87 (151)
T ss_dssp EEEEESSCCBHHHHH
T ss_pred cEeeecccCCcHHHH
Confidence 469999999966543
No 4
>d1p6oa_ c.97.1.2 (A:) Cytosine deaminase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=42.68 E-value=16 Score=29.28 Aligned_cols=15 Identities=27% Similarity=0.472 Sum_probs=11.5
Q ss_pred EEEEeccCCCCcccc
Q 015661 131 LHLYISQLPCGDASL 145 (403)
Q Consensus 131 lhLYiS~~PCGDAsi 145 (403)
.-||+|..||-.++.
T Consensus 80 ~tlyvTlEPC~mC~~ 94 (156)
T d1p6oa_ 80 TTLYTTLSPCDMCTG 94 (156)
T ss_dssp EEEEEEECCCHHHHH
T ss_pred eEEEeeccCCHHHHH
Confidence 468999999965544
No 5
>d2a8na1 c.97.1.2 (A:2-131) Cytidine and deoxycytidylate deaminase CodA {Agrobacterium tumefaciens [TaxId: 358]}
Probab=29.04 E-value=15 Score=28.45 Aligned_cols=15 Identities=27% Similarity=0.592 Sum_probs=11.4
Q ss_pred EEEEeccCCCCcccc
Q 015661 131 LHLYISQLPCGDASL 145 (403)
Q Consensus 131 lhLYiS~~PCGDAsi 145 (403)
.-||+|..||--++.
T Consensus 73 ~tly~T~EPC~mC~~ 87 (130)
T d2a8na1 73 ADLYVTLEPCTMCAA 87 (130)
T ss_dssp CEEEEEECCBHHHHH
T ss_pred CEEecccccCHHHHH
Confidence 358999999965543
No 6
>d2cqea1 g.66.1.1 (A:458-513) Zinc finger CCCH domain-containing protein C19orf7 (KIAA1064) {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.99 E-value=25 Score=23.35 Aligned_cols=28 Identities=18% Similarity=0.254 Sum_probs=21.0
Q ss_pred cCCCcccCCccCCCCCcccchHHHHHHH
Q 015661 54 TGTKCIGRSLLSPHGDIVNDSHAEIVAR 81 (403)
Q Consensus 54 TG~Kc~~~~~l~~~G~~lhD~HAEVlAR 81 (403)
||+||+.++.-...=.-|.|---|+|++
T Consensus 8 tg~kCy~gd~C~FSH~pLt~~t~~lL~K 35 (56)
T d2cqea1 8 TTGNCINGDDCMFSHDPLTEETRELLDK 35 (56)
T ss_dssp HTSCCSSCTTCSSBCCCCCHHHHHHHHH
T ss_pred cCCcccCCCcccccCCccCHHHHHHHHH
Confidence 8999999877654446888877777654
No 7
>d1qr0a1 d.150.1.1 (A:1-101) 4'-Phosphopantetheinyl transferase SFP {Bacillus subtilis [TaxId: 1423]}
Probab=22.83 E-value=28 Score=25.42 Aligned_cols=52 Identities=19% Similarity=0.177 Sum_probs=29.2
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhhhccCCCCcccccCCCCCeeeeeCCCCceEecCCcEEEEEecc
Q 015661 72 NDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYRFREGWQLHLYISQ 137 (403)
Q Consensus 72 hD~HAEVlARR~f~r~Ly~el~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~Lk~~v~lhLYiS~ 137 (403)
.|.+.= |+-|.|+|+++.+.... ....+.|..++.||=.|...-.+||=||+
T Consensus 39 ~dr~~~-l~~r~llr~~l~~~~~~-------------~p~~i~~~~~~~GKP~l~~~~~i~FNiSH 90 (101)
T d1qr0a1 39 EDAHRT-LLGDVLVRSVISRQYQL-------------DKSDIRFSTQEYGKPCIPDLPDAHFNISH 90 (101)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHTTC-------------CGGGCCCEECTTSCEECTTCTTCEEEEEE
T ss_pred HHHHHH-HHHHHHHHHHHHHHhCC-------------CccceeEEeCCCCCccccCCCCcEEEecc
Confidence 344443 44466778876554332 11345567777776556544456676666
No 8
>d1bdsa_ g.9.1.1 (A:) BDs-I defensin {Sea anemone (Anemonia sulcata) [TaxId: 6108]}
Probab=22.42 E-value=11 Score=23.01 Aligned_cols=8 Identities=75% Similarity=1.294 Sum_probs=6.3
Q ss_pred cCCCCCCc
Q 015661 188 RKPGRGDT 195 (403)
Q Consensus 188 tKPGRgd~ 195 (403)
-||||||-
T Consensus 8 gkpgrgdl 15 (43)
T d1bdsa_ 8 GKPGRGDL 15 (43)
T ss_dssp SCCSCCEE
T ss_pred CCCCCCcE
Confidence 48999983
No 9
>d2b3ja1 c.97.1.2 (A:1-151) tRNA adenosine deaminase TadA {Staphylococcus aureus [TaxId: 1280]}
Probab=18.93 E-value=38 Score=26.43 Aligned_cols=14 Identities=29% Similarity=0.586 Sum_probs=10.8
Q ss_pred EEEEeccCCCCccc
Q 015661 131 LHLYISQLPCGDAS 144 (403)
Q Consensus 131 lhLYiS~~PCGDAs 144 (403)
.-||+|..||--++
T Consensus 74 ~~ly~t~ePC~mC~ 87 (151)
T d2b3ja1 74 CTLYVTLEPCVMCA 87 (151)
T ss_dssp EEEEEEECCCHHHH
T ss_pred CeEEEeccchhhhh
Confidence 56999999995443
No 10
>d1nbja_ g.3.3.2 (A:) Cycloviolacin O1 {Plant (Viola odorata) [TaxId: 97441]}
Probab=16.05 E-value=7.6 Score=22.12 Aligned_cols=10 Identities=40% Similarity=0.959 Sum_probs=7.0
Q ss_pred eeechhhHHH
Q 015661 197 LSVSCSDKIA 206 (403)
Q Consensus 197 ~SmSCSDKLa 206 (403)
+--|||||.+
T Consensus 16 lgc~c~~kvc 25 (30)
T d1nbja_ 16 LGCSCSNRVC 25 (30)
T ss_dssp TTCEEETTEE
T ss_pred ecccccCcee
Confidence 3458999875
Done!