Query 015664
Match_columns 403
No_of_seqs 300 out of 2114
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 16:32:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015664.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015664hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4bby_A Alkyldihydroxyacetoneph 100.0 8.9E-48 3.1E-52 412.6 29.6 263 108-372 157-432 (658)
2 3pm9_A Putative oxidoreductase 100.0 7.8E-48 2.7E-52 398.6 27.6 284 107-392 9-300 (476)
3 2uuu_A Alkyldihydroxyacetoneph 100.0 1.6E-44 5.6E-49 381.9 24.3 284 107-392 86-404 (584)
4 1f0x_A DLDH, D-lactate dehydro 100.0 5.2E-43 1.8E-47 368.8 17.3 273 112-394 9-338 (571)
5 1e8g_A Vanillyl-alcohol oxidas 100.0 1.1E-40 3.6E-45 351.8 28.2 274 114-392 23-362 (560)
6 1wvf_A 4-cresol dehydrogenase 100.0 1.9E-40 6.4E-45 347.1 29.1 277 113-393 18-332 (520)
7 2exr_A Cytokinin dehydrogenase 100.0 3.9E-41 1.3E-45 352.5 15.5 243 110-365 25-278 (524)
8 1w1o_A Cytokinin dehydrogenase 100.0 3.9E-40 1.3E-44 345.7 18.6 247 112-366 31-292 (534)
9 3tsh_A Pollen allergen PHL P 4 100.0 4.6E-36 1.6E-40 312.4 20.5 228 112-347 8-248 (500)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 5.1E-35 1.8E-39 301.5 22.0 198 146-350 34-235 (459)
11 3rja_A Carbohydrate oxidase; p 100.0 1.1E-34 3.6E-39 300.2 22.9 206 125-336 12-219 (473)
12 1zr6_A Glucooligosaccharide ox 100.0 1.5E-34 5.2E-39 301.2 19.1 212 116-335 6-222 (503)
13 3fw9_A Reticuline oxidase; BI- 100.0 2.7E-34 9.1E-39 298.4 18.9 194 148-348 43-241 (495)
14 4feh_A Oxidoreductase DPRE1; a 100.0 8.9E-34 3.1E-38 293.6 20.7 198 146-348 38-239 (481)
15 3vte_A Tetrahydrocannabinolic 100.0 1.8E-33 6E-38 293.4 21.3 195 148-349 51-250 (518)
16 2wdx_A Putative hexose oxidase 100.0 2.2E-33 7.4E-38 293.7 21.2 190 146-336 53-258 (523)
17 2ipi_A Aclacinomycin oxidoredu 100.0 2.8E-33 9.6E-38 292.8 21.3 189 146-335 51-255 (521)
18 3pop_A GILR oxidase; FAD bindi 100.0 3.9E-33 1.3E-37 290.2 19.7 212 120-336 5-234 (501)
19 1hsk_A UDP-N-acetylenolpyruvoy 100.0 2.2E-35 7.7E-40 291.7 2.5 260 109-390 12-281 (326)
20 2y3s_A TAML; oxidoreductase; H 100.0 2.9E-32 1E-36 285.5 21.6 189 146-335 54-259 (530)
21 2vfr_A Xylitol oxidase, aldito 100.0 9.6E-33 3.3E-37 281.7 16.7 202 147-365 17-220 (422)
22 3js8_A Cholesterol oxidase; ch 100.0 1.4E-29 4.6E-34 263.9 18.3 187 146-343 25-235 (540)
23 2i0k_A Oxidoreductase; MIX alp 100.0 2.7E-29 9.4E-34 264.7 18.2 188 146-343 31-239 (561)
24 3tx1_A UDP-N-acetylenolpyruvoy 100.0 2.4E-29 8.4E-34 247.8 13.7 196 110-326 19-217 (322)
25 1uxy_A MURB, uridine diphospho 99.9 9.8E-27 3.3E-31 230.8 19.6 198 142-351 7-214 (340)
26 3i99_A UDP-N-acetylenolpyruvoy 99.9 4.6E-27 1.6E-31 234.2 16.8 198 142-352 23-230 (357)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.9 2.4E-25 8.1E-30 213.9 11.2 174 142-351 15-190 (268)
28 2yvs_A Glycolate oxidase subun 99.9 3E-23 1E-27 193.8 10.9 126 209-338 2-128 (219)
29 1ffv_C CUTM, flavoprotein of c 98.6 9E-08 3.1E-12 92.5 8.3 153 151-323 5-176 (287)
30 2w3s_A Xanthine dehydrogenase; 98.1 2.4E-06 8.3E-11 87.7 5.1 123 149-282 175-312 (462)
31 1n62_C Carbon monoxide dehydro 97.9 1.5E-05 5E-10 76.9 6.0 120 151-283 5-144 (288)
32 3nvz_B Xanthine dehydrogenase/ 97.6 0.00014 5E-09 70.5 8.5 106 148-257 7-133 (305)
33 1t3q_C Quinoline 2-oxidoreduct 97.0 0.00058 2E-08 65.7 5.2 102 151-256 5-118 (288)
34 3hrd_C Nicotinate dehydrogenas 95.0 0.049 1.7E-06 52.3 7.5 104 151-257 3-119 (296)
35 3unc_A Xanthine dehydrogenase/ 92.8 0.074 2.5E-06 61.0 4.7 105 149-257 231-356 (1332)
36 1rm6_B 4-hydroxybenzoyl-COA re 91.6 0.23 7.9E-06 48.3 5.9 97 151-255 6-118 (324)
37 3zyv_A AOH1; oxidoreductase, m 86.1 0.47 1.6E-05 54.5 4.3 102 152-257 241-363 (1335)
38 1rzw_A Protein AF2095(GR4); be 42.7 66 0.0022 26.4 6.8 38 148-185 46-84 (123)
39 1xty_A PTH, peptidyl-tRNA hydr 38.2 35 0.0012 27.8 4.4 37 147-183 51-88 (120)
40 1wn2_A Peptidyl-tRNA hydrolase 36.9 37 0.0013 27.8 4.4 38 147-184 52-90 (121)
41 1rlk_A Hypothetical protein TA 33.5 1E+02 0.0036 24.8 6.6 38 147-184 48-86 (117)
42 3p04_A Uncharacterized BCR; SE 31.5 46 0.0016 25.7 3.8 21 152-172 7-27 (87)
43 2zv3_A PTH, peptidyl-tRNA hydr 28.9 62 0.0021 26.1 4.4 31 148-178 47-77 (115)
44 1q7s_A BIT1, protein CGI-147; 23.7 1E+02 0.0035 24.8 4.9 30 149-178 50-79 (117)
45 1w85_B Pyruvate dehydrogenase 23.2 3.6E+02 0.012 25.2 9.4 85 149-238 138-229 (324)
46 2dnh_A Bruno-like 5, RNA bindi 21.9 1.2E+02 0.0042 22.6 4.9 46 299-348 31-76 (105)
47 3llb_A Uncharacterized protein 21.3 1.4E+02 0.0048 22.1 4.9 39 213-256 7-45 (83)
48 2lnd_A De novo designed protei 21.1 85 0.0029 23.9 3.5 34 153-186 30-63 (112)
49 2r2z_A Hemolysin; APC85144, en 21.0 1.2E+02 0.004 23.0 4.5 39 213-256 14-52 (93)
50 2kng_A Protein LSR2; DNA-bindi 20.6 44 0.0015 23.6 1.7 22 161-182 13-34 (55)
51 3ulh_A THO complex subunit 4; 20.5 1.2E+02 0.0042 22.7 4.6 46 299-348 45-90 (107)
52 2ozl_B PDHE1-B, pyruvate dehyd 20.3 75 0.0026 30.4 3.9 31 152-182 154-184 (341)
53 2pls_A CBS domain protein; APC 20.1 1.6E+02 0.0055 21.8 5.1 41 213-256 7-49 (86)
No 1
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=8.9e-48 Score=412.59 Aligned_cols=263 Identities=27% Similarity=0.419 Sum_probs=235.1
Q ss_pred CCCCcHHHHHHHHHhcCCCeeeChhhhhhccCCCC--C-----cCcCCCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeee
Q 015664 108 HKEIPQELVDELKAICQDDMTMDYEERYIHGKPQN--S-----FHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPY 180 (403)
Q Consensus 108 ~~~~~~~~~~~L~~~lg~~v~~~~~~~~~~~~~~~--s-----~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~ 180 (403)
...++++++++|+++.++ ..++.+++..|+..+. . ...+...|++||+|+|+|||+++|++|+++++||+|+
T Consensus 157 ~~~~~~~~~~~l~~~~~~-~~~~~~~r~~h~~g~s~~d~~~~~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvpr 235 (658)
T 4bby_A 157 PSIVNEDFLHELKKTNIS-YSQEADDRVFRAHGHCLHEIFLLREGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPI 235 (658)
T ss_dssp CCCCCHHHHHHHHHHTCE-EECCHHHHHHTSCCSCHHHHHHHHSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCHHHHHHHHHhccc-ccCchHHHhhhcCCCCHHHHHHHhCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEEEE
Confidence 345678999999998765 5678777776654321 0 1123468999999999999999999999999999999
Q ss_pred CCCCCCCcccccC----CCcEEEEcCCCCCcEEeeecCcEEEEccCCCHHHHHHHHhcCCCeecCCCCc--ccccccccc
Q 015664 181 GGATSIEGHTLSP----NGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGP--GATIGGMCA 254 (403)
Q Consensus 181 GgG~s~~g~~~~~----~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~~~L~~~l~~~Gl~~p~~~~~--~~TvGG~ia 254 (403)
|||||+.|+..+. .++|+|||++||+|+++|+++.+++||||++|.+|+++|.++|++||++|++ .+||||+++
T Consensus 236 GgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~atVeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iA 315 (658)
T 4bby_A 236 GGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAHVEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWIS 315 (658)
T ss_dssp SSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEEEETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHHH
T ss_pred CCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEEEecCchHHHHHHHHHHcCCccCCCCCCccccEEeehhh
Confidence 9999999888764 3579999999999999999999999999999999999999999999999875 599999999
Q ss_pred ccccCCCccccccccceEEEEEEEeCCCeEEEcccccccccccccchhhhhccCCceeEEEEEEEEeEecCCccEEEEEe
Q 015664 255 TRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCN 334 (403)
Q Consensus 255 ~n~~G~~s~~yG~~~D~V~~levV~~dG~iv~~~~~~~~~~~g~dL~~~~~Gs~GtlGIIT~~tLkl~p~p~~~~~~~~~ 334 (403)
+|++|..+.+||.++|+|+++|||++||++++.+ +..|++.||||+++++||||||||||+++|||+|.|+.....++.
T Consensus 316 tna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~-~~~k~~aGyDL~~L~iGSEGTLGIITeatLrL~P~P~~~~~~~~~ 394 (658)
T 4bby_A 316 TRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSC-QGPRMSTGPDIHHFIMGSEGTLGVITEATIKIRPTPEYQKYGSVA 394 (658)
T ss_dssp HTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSC-CCSSCCSSSCTHHHHTTCTTSSCEEEEEEEECEECCSEEEEEEEE
T ss_pred cCCCCCCccCcCCHHHheeeEEEEeCCCcccccc-cccccCCCcCHHHHhccCCCcCcceeeeeeeeccCCccccccccc
Confidence 9999999999999999999999999999998754 446888999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCCceEEEecCHHHHHHHHHh
Q 015664 335 FPTIKDAADVAIATMLSGIQVSRVELLDEVQVRAVNIA 372 (403)
Q Consensus 335 f~~~~~a~~~~~~i~~~~~~~~~~e~~D~~~~~~~~~~ 372 (403)
|++++++.+++.++.+.++.|.++|+||+..++.....
T Consensus 395 f~d~~~a~~av~~i~~~~~~psa~El~D~~~~~~~~~~ 432 (658)
T 4bby_A 395 FPNFEQGVACLREIAKQRCAPASIRLMDNQQFQFGHAL 432 (658)
T ss_dssp ESSHHHHHHHHHHHHHTTCCCSEEEEECHHHHHHHHHT
T ss_pred cCCchhhhhhHHHHHHcCCCccccccccHHHHHHHHhh
Confidence 99999999999999999999999999999988766543
No 2
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=7.8e-48 Score=398.60 Aligned_cols=284 Identities=29% Similarity=0.401 Sum_probs=253.5
Q ss_pred CCCCCcHHHHHHHHHhcCC-CeeeChhhhhhccCCCCCcCcCCCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCC
Q 015664 107 SHKEIPQELVDELKAICQD-DMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATS 185 (403)
Q Consensus 107 ~~~~~~~~~~~~L~~~lg~-~v~~~~~~~~~~~~~~~s~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s 185 (403)
....++++++++|++++|+ +|.+++.....|..++.. +....|.+||+|+|++||++++++|+++++|++++|||||
T Consensus 9 ~~~~~~~~~~~~L~~~lg~~~v~~~~~~~~~~~~d~~~--~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~ 86 (476)
T 3pm9_A 9 SPVTLSPELIARFTAIVGDKHALTDPLELEAYITEERN--LYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTG 86 (476)
T ss_dssp ---CCCHHHHHHHHHHHCGGGEECSHHHHHHHHBCTTC--CCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCC
T ss_pred CcccCCHHHHHHHHHhcCCCcEecCHHHHHHHhccccc--ccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCC
Confidence 3446788999999999984 788887777777765432 3457999999999999999999999999999999999999
Q ss_pred CCcccccCCCcEEEEcCCCCCcEEeeecCcEEEEccCCCHHHHHHHHhcCCCeecCCCCc--cccccccccccccCCCcc
Q 015664 186 IEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGP--GATIGGMCATRCSGSLAV 263 (403)
Q Consensus 186 ~~g~~~~~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~~~L~~~l~~~Gl~~p~~~~~--~~TvGG~ia~n~~G~~s~ 263 (403)
+.|++++.++|++|||++||+|+++|+++.+++||||++|.+|+++|.++|+.+|++++. ++||||++++|++|..+.
T Consensus 87 ~~g~~~~~~ggvvIdl~~m~~i~~id~~~~~v~V~aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~ 166 (476)
T 3pm9_A 87 LVGGQTPHNGEVVISLKRMDKIREIDTSSNTITVEAGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAAL 166 (476)
T ss_dssp SSSTTCCCSSCEEEECTTCCCEEEEETTTTEEEEETTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHH
T ss_pred CCCCccCCCCcEEEEeeCCCceEEEcCCCCeEEECCCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCccc
Confidence 999998877799999999999999999999999999999999999999999999988765 799999999999999999
Q ss_pred ccccccceEEEEEEEeCCCeEEEcccccccccccccchhhhhccCCceeEEEEEEEEeEecCCccEEEEEeCCCHHHHHH
Q 015664 264 RYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTIKDAAD 343 (403)
Q Consensus 264 ~yG~~~D~V~~levV~~dG~iv~~~~~~~~~~~g~dL~~~~~Gs~GtlGIIT~~tLkl~p~p~~~~~~~~~f~~~~~a~~ 343 (403)
+||.++|+|+++|||++||++++++....|+..||||+|+++|++|+|||||+++||++|.|+.....++.|++++++.+
T Consensus 167 ~yG~~~d~V~~levV~~dG~v~~~~~~~~k~~~g~dl~~l~~Gs~GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~ 246 (476)
T 3pm9_A 167 AYGLARDMALGVEVVLADGRVMNLLSKLKKDNTGYDLRDLFIGAEGTLGIITAATLKLFPKPRAVETAFVGLQSPDDALK 246 (476)
T ss_dssp HHCCHHHHEEEEEEECTTSCEEECCCCCSCCCSSCCCHHHHTTSTTSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHH
T ss_pred ccCcHHHheeEEEEEccCCeEEEcCCcccCCCCCcCHHHHhccCCCCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHH
Confidence 99999999999999999999999877667888899999999999999999999999999999988888999999999999
Q ss_pred HHHHHHH-cCCCceEEEecCHHHHHHHHHhhCCCCC--C--CCceEEEEcCChh
Q 015664 344 VAIATML-SGIQVSRVELLDEVQVRAVNIANGKNLP--E--LPTLMFEFIGTRE 392 (403)
Q Consensus 344 ~~~~i~~-~~~~~~~~e~~D~~~~~~~~~~~~~~~p--~--~~~l~~e~~g~~~ 392 (403)
++.++.+ .+..|.++|+||+..++.++.+.+...| + .+.|++||+|+++
T Consensus 247 ~~~~~~~~~g~~p~a~El~d~~~~~~~~~~~~~~~~~~~~~~~~llve~~g~~~ 300 (476)
T 3pm9_A 247 LLGIAQGEAAGNLTSFELIAETPLDFSVRHANNRDPLEARYPWYVLIELSSPRD 300 (476)
T ss_dssp HHHHHHHHHGGGEEEEEEEEHHHHHHHHHHTTCCCCSSSCCSEEEEEEEEESSS
T ss_pred HHHHHHHhcCCCceEEEecCHHHHHHHHhccCCCCCCCccCCeEEEEEEccCcH
Confidence 9999876 5889999999999999988776544333 2 3589999999763
No 3
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=100.00 E-value=1.6e-44 Score=381.91 Aligned_cols=284 Identities=28% Similarity=0.404 Sum_probs=240.5
Q ss_pred CCCCCcHHHHHHHHHhc-CCCeeeChhhhhhccCCCC-----CcC--cCCCCCcEEEEcCCHHHHHHHHHHHHhCCCCee
Q 015664 107 SHKEIPQELVDELKAIC-QDDMTMDYEERYIHGKPQN-----SFH--KAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPII 178 (403)
Q Consensus 107 ~~~~~~~~~~~~L~~~l-g~~v~~~~~~~~~~~~~~~-----s~~--~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~ 178 (403)
....++++++++|++++ |++|.+++.++..|+++.. +++ .....|.+||+|+|++||+++|++|+++++|++
T Consensus 86 p~~~~~~~~~~~L~~~l~g~~v~~~~~~~~~y~~d~~~~~~~~~~~g~~~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~ 165 (584)
T 2uuu_A 86 DPPKQYPEFVRELKAFFLPDQLKDDKLARITHTFGKSLRDLIRVRIGQVKNAPDLIVLPHSHEEVERLVQLAHKYNVVII 165 (584)
T ss_dssp CCCCCCHHHHHHHHTTSCGGGEECSHHHHHHTTCCSSHHHHHHHHTTCCCCCCSEEECCCSHHHHHHHHHHHHHHTCEEE
T ss_pred CCCcCCHHHHHHHHhhcCCCeEEECHHHHHHhccCCchhhhhhhccCccCCCCCEEEeCCCHHHHHHHHHHHHHcCCeEE
Confidence 34456788999999999 8779999888777765421 111 123589999999999999999999999999999
Q ss_pred eeCCCCCCCcccccC---CCcEEEEcCCCCCcEEeeecCcEEEEccCCCHHHHHHHHhcCCCeecCCCCc--cccccccc
Q 015664 179 PYGGATSIEGHTLSP---NGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGP--GATIGGMC 253 (403)
Q Consensus 179 ~~GgG~s~~g~~~~~---~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~~~L~~~l~~~Gl~~p~~~~~--~~TvGG~i 253 (403)
++|||||+.|++.+. +++|+|||++||+|+++|+++.+++||||++|.+|+++|.++|+.++++|+. .+||||++
T Consensus 166 ~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~~~~~p~s~~~~tvGG~i 245 (584)
T 2uuu_A 166 PMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGIMGPELEKQLHKQGVSLGHDPDSFEFSTLGGWL 245 (584)
T ss_dssp EESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTCBHHHHHHHHHHTTEECCCCCTTGGGCBHHHHH
T ss_pred EEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCCcHHHHHHHHHHcCCeeCcCCCccCCeeEeeec
Confidence 999999999988764 4689999999999988999999999999999999999999999999998864 59999999
Q ss_pred cccccCCCccccccccceEEEEEEEeCCCeEEEcccccccccccccchhhhhccCCceeEEEEEEEEeEecCCccEEEEE
Q 015664 254 ATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATC 333 (403)
Q Consensus 254 a~n~~G~~s~~yG~~~D~V~~levV~~dG~iv~~~~~~~~~~~g~dL~~~~~Gs~GtlGIIT~~tLkl~p~p~~~~~~~~ 333 (403)
++|++|..+.+||.++|+|+++|||++||++++. ...++..||||+|+++|++|+|||||+++||++|.|+......+
T Consensus 246 a~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~--~~~~~~~g~dl~~~~~GseGtlGIIT~~tlrl~p~p~~~~~~~~ 323 (584)
T 2uuu_A 246 ATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELR--NGARSGAGINYKHIILGSEGTLGIITEAVMKVHAVPQAVEYYGF 323 (584)
T ss_dssp HHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC---------CCCTHHHHTTCTTSSCEEEEEEEECEECCSEEEEEEE
T ss_pred cCCCCcccccCcCcHHHheeeEEEEeCCCCEEEC--CccccCCCcchhhhhccCCCCcEEEEEEEEEEEecccceEEEEE
Confidence 9999999999999999999999999999998742 12355679999999999999999999999999999998888899
Q ss_pred eCCCHHHHHHHHHHHHHcCCCceEEEecCHHHHHHHHH------------------hhC--CCCC--CCCceEEEEcCCh
Q 015664 334 NFPTIKDAADVAIATMLSGIQVSRVELLDEVQVRAVNI------------------ANG--KNLP--ELPTLMFEFIGTR 391 (403)
Q Consensus 334 ~f~~~~~a~~~~~~i~~~~~~~~~~e~~D~~~~~~~~~------------------~~~--~~~p--~~~~l~~e~~g~~ 391 (403)
.|++++++.+++.++.+.++.|.++|+||+..+..... +.. ..+| ..+.+++||+|++
T Consensus 324 ~f~~~~~a~~~~~~~~~~~~~p~a~El~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llve~~g~~ 403 (584)
T 2uuu_A 324 LFPTFAHAVSALQQIRSSEVIPTMIRVYDPEETQLSFAWKPSKGAVSEFTSAMVKKYLHYIRSFDFKNVCLSIIGFEGPK 403 (584)
T ss_dssp EESSHHHHHHHHHHHHHHTCCCSEEEEECHHHHHHHHHTCCSCCCTTCCHHHHHHHHHHHTTTSCTTTCEEEEEEEEECH
T ss_pred EcCCHHHHHHHHHHHHhcCCCceEEEEechhHHHHHhhccCcccccchhhhhhHHHhhhhccCCCCCccEEEEEEEecCh
Confidence 99999999999999999999999999999987653221 111 2333 3457999999986
Q ss_pred h
Q 015664 392 E 392 (403)
Q Consensus 392 ~ 392 (403)
+
T Consensus 404 ~ 404 (584)
T 2uuu_A 404 K 404 (584)
T ss_dssp H
T ss_pred H
Confidence 5
No 4
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=100.00 E-value=5.2e-43 Score=368.79 Aligned_cols=273 Identities=18% Similarity=0.178 Sum_probs=227.6
Q ss_pred cHHHHHHHHHhcC-CCeeeChhhhhhccCCCCCcCcCCCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCccc
Q 015664 112 PQELVDELKAICQ-DDMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHT 190 (403)
Q Consensus 112 ~~~~~~~L~~~lg-~~v~~~~~~~~~~~~~~~s~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~~ 190 (403)
.++++++|++++| ++|.+++..+..|.+++. ...+.|.+||+|+|++||+++|++|+++++||+++|||||+.|++
T Consensus 9 ~~~~~~~L~~~~g~~~v~~~~~~~~~y~~d~~---~~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~ 85 (571)
T 1f0x_A 9 NKAFLNELARLVGSSHLLTDPAKTARYRKGFR---SGQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGS 85 (571)
T ss_dssp CHHHHHHHHHHHCGGGEECCHHHHHHHHBCSS---SCBBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTT
T ss_pred hHHHHHHHHHhcCCCeEEcCHHHHHHHhcccc---ccCCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCc
Confidence 3568999999999 589888877777877643 234789999999999999999999999999999999999999998
Q ss_pred ccCCC-----cEEEEcCCCCCcEEeeecCcEEEEccCCCHHHHHHHHhcCCCeecCCCCc---cccccccccccccCCCc
Q 015664 191 LSPNG-----GVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGP---GATIGGMCATRCSGSLA 262 (403)
Q Consensus 191 ~~~~~-----gvvIdl~~mn~i~~id~~~~~v~VeaGv~~~~L~~~l~~~Gl~~p~~~~~---~~TvGG~ia~n~~G~~s 262 (403)
.+.++ +|+|||++||+|+++| ++.+++||||++|.+|+++|.++|+.+|.+++. ++||||++++|++|..+
T Consensus 86 ~~~~~~~~r~gvvIdl~rmn~I~~id-~~~~v~v~aGv~l~~L~~~l~~~Gl~~p~~~g~s~~~~tvGG~ia~nagG~~~ 164 (571)
T 1f0x_A 86 TPNGNDYDRDVVIISTLRLDKLHVLG-KGEQVLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLV 164 (571)
T ss_dssp SCCBSCCSSCEEEEECTTCCCEEEET-TTTEEEECTTCBHHHHHHHHGGGTEECSCCCGGGGGTCBHHHHHHTTCCCSCT
T ss_pred cCCCcCCcCceEEEECcccCCceeEC-CCCeEEEcCCcCHHHHHHHHHhcCccCCcCCCccCCCceecccccCCCCcccc
Confidence 87653 8999999999998898 467899999999999999999999988887753 57999999999999999
Q ss_pred cccccccc----------------eEEEEEEEeCCCeEEEcccccc------------cccccc----------------
Q 015664 263 VRYGTMRD----------------NVINLKVVLANGDVVKTASRAR------------KSAAGY---------------- 298 (403)
Q Consensus 263 ~~yG~~~D----------------~V~~levV~~dG~iv~~~~~~~------------~~~~g~---------------- 298 (403)
.+||.++| +|+++|||++||+++++..... +++.||
T Consensus 165 ~~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~dG~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~ 244 (571)
T 1f0x_A 165 QRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYN 244 (571)
T ss_dssp TSCSSCCSCEEEEEECTTSCEEEEECSSBCCCSSHHHHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCT
T ss_pred cCCCchhhhhhhheeccCCceEEEEeeeEEEEcCCCcEEEecCccccccchhhhcccccccCCccccccccccccccccc
Confidence 99999999 9999999999999997764321 567788
Q ss_pred -cchhhh--hccCCceeEEEEEEEEeEecCCccEEEEEeCCCHHHHHHHHHHHHH-cCCCceEEEecCHHHHHHHHHhhC
Q 015664 299 -DLTRLI--IGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTIKDAADVAIATML-SGIQVSRVELLDEVQVRAVNIANG 374 (403)
Q Consensus 299 -dL~~~~--~Gs~GtlGIIT~~tLkl~p~p~~~~~~~~~f~~~~~a~~~~~~i~~-~~~~~~~~e~~D~~~~~~~~~~~~ 374 (403)
||++++ +||+|+||| |+++||++|.|+....+++.|++++++.+++..++. .+..|.++|+||+..++.++.+.+
T Consensus 245 ~Dl~~l~~a~GseGtlGV-t~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~a~E~~d~~~~~~~~~~~~ 323 (571)
T 1f0x_A 245 ADPDRLFESSGCAGKLAV-FAVRLDTFEAEKNQQVFYIGTNQPEVLTEIRRHILANFENLPVAGEYMHRDIYDIAEKYGK 323 (571)
T ss_dssp TCGGGCCSSTTCTTSSEE-EEEEEECEECCSSCEEEEEEESCHHHHHHHHHHHHHHCSSCCSEEEEEEHHHHHHHC----
T ss_pred ccHHHHHHhcCCCCceeE-EEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHhcc
Confidence 999999 999999999 999999999999988899999999999999999884 788999999999999887764422
Q ss_pred CCCCCCCceEEEEcCChhhH
Q 015664 375 KNLPELPTLMFEFIGTREMI 394 (403)
Q Consensus 375 ~~~p~~~~l~~e~~g~~~~~ 394 (403)
...++||+.+....+
T Consensus 324 -----~~~~~i~~~~~~~~p 338 (571)
T 1f0x_A 324 -----DTFLMIDKLGTDKMP 338 (571)
T ss_dssp --------------------
T ss_pred -----cccccccccCccccc
Confidence 346677776644343
No 5
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=100.00 E-value=1.1e-40 Score=351.79 Aligned_cols=274 Identities=22% Similarity=0.291 Sum_probs=224.4
Q ss_pred HHHHHHHHhcCC-CeeeChhhhhh----ccCC-----CCCc-CcCCCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCC
Q 015664 114 ELVDELKAICQD-DMTMDYEERYI----HGKP-----QNSF-HKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGG 182 (403)
Q Consensus 114 ~~~~~L~~~lg~-~v~~~~~~~~~----~~~~-----~~s~-~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~Gg 182 (403)
+++++|++++|+ +|.+++.++.. |+.+ .++. ......|.+||+|+|++||+++|++|+++++|++++|+
T Consensus 23 ~~~~~L~~~~g~~~v~~d~~~~~~~~~~y~~d~~~~d~~~~~~~~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~ 102 (560)
T 1e8g_A 23 EFIQDIIRIVGSENVEVISSKDQIVDGSYMKPTHTHDPTHVMDQDYFLASAIVAPRNVADVQSIVGLANKFSFPLWPISI 102 (560)
T ss_dssp HHHHHHHHHHCGGGEEECC-----CCBCSSSBCSSSCSSCCSCTTSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESS
T ss_pred HHHHHHHHhhCcccEecCHHHhhhhhhhhccccccccccccccccccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecC
Confidence 578999999995 79999888777 6554 1111 12457899999999999999999999999999999999
Q ss_pred CCCCC-ccccc-CCCcEEEEc-CCCCCcEEeeecCcEEEEccCCCHHHHHHHHhcCCCe--ecCCCCc--cccccccccc
Q 015664 183 ATSIE-GHTLS-PNGGVCIDL-SLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLF--FPLDPGP--GATIGGMCAT 255 (403)
Q Consensus 183 G~s~~-g~~~~-~~~gvvIdl-~~mn~i~~id~~~~~v~VeaGv~~~~L~~~l~~~Gl~--~p~~~~~--~~TvGG~ia~ 255 (403)
|||+. |+..+ .++||+||| ++||+|+++|+++.+++||||++|.+|+++|.++|++ +|+++.. .+|+||++++
T Consensus 103 Gt~~~~gg~~p~~~~gvvidl~~~mn~il~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~ 182 (560)
T 1e8g_A 103 GRNSGYGGAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPGVTYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVE 182 (560)
T ss_dssp CCCTTTTTTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHT
T ss_pred CCcCCcCCCCCCcCCEEEEEchHhcCCeEEEcCCCCEEEEeCCCCHHHHHHHHHHcCCccccCCCCCCCCccchhhhccC
Confidence 99997 77665 468999999 9999999999999999999999999999999999999 8776544 5999999999
Q ss_pred cccCCCccccccccceEEEEEEEeCCCeEEEcccccccc-------------------------cccccchhhhhccCCc
Q 015664 256 RCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKS-------------------------AAGYDLTRLIIGSEGT 310 (403)
Q Consensus 256 n~~G~~s~~yG~~~D~V~~levV~~dG~iv~~~~~~~~~-------------------------~~g~dL~~~~~Gs~Gt 310 (403)
|++|.. +||.++|+|+++|||++||++++++....++ .+||||.+++. +|+
T Consensus 183 ~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~--~Gt 258 (560)
T 1e8g_A 183 RGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPKRPETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFS--QSN 258 (560)
T ss_dssp TCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCCGGGTTCCGGGSCCCTTTTTCSCCSSCCCGGGGS--SSS
T ss_pred CCCCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCcccccccccchhhhhhhhcccccccccCCcchhcccc--cCc
Confidence 998874 9999999999999999999999987654443 45889988875 579
Q ss_pred eeEEEEEEEEeEecCCccEEEEEeCCCHHHHHHH---HHHHHHcCCCceEEEecCHHHHHHHH-----HhhC--CCCCC-
Q 015664 311 LGIITEVTLRLQKIPQHSVVATCNFPTIKDAADV---AIATMLSGIQVSRVELLDEVQVRAVN-----IANG--KNLPE- 379 (403)
Q Consensus 311 lGIIT~~tLkl~p~p~~~~~~~~~f~~~~~a~~~---~~~i~~~~~~~~~~e~~D~~~~~~~~-----~~~~--~~~p~- 379 (403)
|||||+++|||+|.|+......+.|++++++.++ +.++++.++.|.++|+||... +.+. .+.. ..+|.
T Consensus 259 lGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~~~~~~~p~~~el~d~~~-~~~~l~~~~~~~~~~~~~p~~ 337 (560)
T 1e8g_A 259 MGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQAVDIIRPLRLGMALQNVPTIRHILL-DAAVLGDKRSYSSRTEPLSDE 337 (560)
T ss_dssp SEEEEEEEEECEECCSCEEEEEEEECSTTHHHHHHHHHHHHHHTTSSCSCCEEEEHHH-HHHHHCCGGGTCCCSSCCCHH
T ss_pred EEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHHHHHHHHHHHHcCCCcceeEEechHH-HhhhhhhhhhhccCCCCCCHH
Confidence 9999999999999999988899999999887665 456777899999999999985 3221 1212 23442
Q ss_pred ------------CCceEEEEcCChh
Q 015664 380 ------------LPTLMFEFIGTRE 392 (403)
Q Consensus 380 ------------~~~l~~e~~g~~~ 392 (403)
.+.+++|++|+++
T Consensus 338 ~~~~l~~~~~~~~~~l~~e~~g~~~ 362 (560)
T 1e8g_A 338 ELDKIAKQLNLGRWNFYGALYGPEP 362 (560)
T ss_dssp HHHHHHHHHTCCSEEEEEEEESCHH
T ss_pred HHHHHHhhcCCCceEEEEEEeCCHH
Confidence 2379999999765
No 6
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=100.00 E-value=1.9e-40 Score=347.12 Aligned_cols=277 Identities=22% Similarity=0.269 Sum_probs=228.7
Q ss_pred HHHHHHHHHhcCC-CeeeChhhhhhccCCCCCcCcCCCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCC-ccc
Q 015664 113 QELVDELKAICQD-DMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIE-GHT 190 (403)
Q Consensus 113 ~~~~~~L~~~lg~-~v~~~~~~~~~~~~~~~s~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~-g~~ 190 (403)
++++++|++++++ .|.+++..+..|+.+++.....+..|.+||+|+|++||+++|++|+++++|++++|+|||+. |++
T Consensus 18 ~~~~~~L~~~l~~~~v~~~~~~~~~y~~d~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~ 97 (520)
T 1wvf_A 18 NKAVQKFRALLGDDNVLVESDQLVPYNKIMMPVENAAHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSA 97 (520)
T ss_dssp HHHHHHHHHHHCGGGEECSHHHHHHHHCCCSSSCGGGGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTT
T ss_pred HHHHHHHHHhcCCCeEecCcHHHHHHhcccccccccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCC
Confidence 3578999999985 68888887777877754432245789999999999999999999999999999999999997 776
Q ss_pred cc-CCCcEEEEcCCCCCcEEeeecCcEEEEccCCCHHHHHHHHhcCCCeecCC--CCc-cccccccccccccCCCccccc
Q 015664 191 LS-PNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLD--PGP-GATIGGMCATRCSGSLAVRYG 266 (403)
Q Consensus 191 ~~-~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~~~L~~~l~~~Gl~~p~~--~~~-~~TvGG~ia~n~~G~~s~~yG 266 (403)
.+ ..+||+|||++||+|+++|+++.+++||||++|.+|+++|.++|+.++++ |.. .++|||++++|++|.. +||
T Consensus 98 ~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~igG~~~~~g~g~~--~yG 175 (520)
T 1wvf_A 98 APVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTFGQMYDYIQENNLPVMLSFSAPSAIAGPVGNTMDRGVGYT--PYG 175 (520)
T ss_dssp SCSSTTCEEEECTTCCCEEEEETTTTEEEECTTCCHHHHHHHHHHTTCSEECCCCSSCTTCCHHHHHHTTCBCSS--TTC
T ss_pred CCCCCCeEEEECCCCCceEEECCCCCEEEECCCCCHHHHHHHHHHcCCcccCCCCCCCCeeeeeecccCCCcCCc--ccc
Confidence 65 36799999999999988999999999999999999999999999999877 433 5999999999998875 999
Q ss_pred cccceEEEEEEEeCCCeEEEcccccccc---------cccccchhhhhccCCceeEEEEEEEEeEecCCccEEEEEeCCC
Q 015664 267 TMRDNVINLKVVLANGDVVKTASRARKS---------AAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPT 337 (403)
Q Consensus 267 ~~~D~V~~levV~~dG~iv~~~~~~~~~---------~~g~dL~~~~~Gs~GtlGIIT~~tLkl~p~p~~~~~~~~~f~~ 337 (403)
.++|+|+++|||++||++++++....++ ..||||.+++.| ++|||||+++||++|.|+......+.|++
T Consensus 176 ~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l~~~~~~~~Gy~l~~l~~g--~~lGiVt~~~l~l~p~p~~~~~~~~~f~~ 253 (520)
T 1wvf_A 176 EHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQIFKWGYGPTLDGMFTQ--ANYGICTKMGFWLMPKPPVFKPFEVIFED 253 (520)
T ss_dssp BGGGGEEEEEEECTTSCEEECGGGGSTTCSCTTTCSCCSSCCCHHHHTT--SSSCEEEEEEEECEECCSEEEEEEEEECC
T ss_pred chhhcEeeeEEEcCCCcEEEeCCCcCCCchhHhhhcCCCCcchhhhccC--CceEEEEEEEEEEEecCCeEEEEEEEeCC
Confidence 9999999999999999999986432222 457888887765 49999999999999999988888899999
Q ss_pred HHHHHH---HHHHHHHcCCCceEEEecCHHHHHHHHHhh-----C--CCCC-------------CCCceEEEEcCChhh
Q 015664 338 IKDAAD---VAIATMLSGIQVSRVELLDEVQVRAVNIAN-----G--KNLP-------------ELPTLMFEFIGTREM 393 (403)
Q Consensus 338 ~~~a~~---~~~~i~~~~~~~~~~e~~D~~~~~~~~~~~-----~--~~~p-------------~~~~l~~e~~g~~~~ 393 (403)
++++.+ ++.++++.++.|.++|+||+..+..++... . ..+| ....+++||+|++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~p~a~El~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~ 332 (520)
T 1wvf_A 254 EADIVEIVDALRPLRMSNTIPNSVVIASTLWEAGSAHLTRAQYTTEPGHTPDSVIKQMQKDTGMGAWNLYAALYGTQEQ 332 (520)
T ss_dssp GGGHHHHHHHHHHHHHTTSSCSCEEEEEHHHHHHHTTCCGGGTCCCSSSCCHHHHHHHHHHHCCCSEEEEEEEEESHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCccceEeccHHHHHHHhcccchhhccCCCCCCHHHHHHHHHhcCCCceEEEEEEeCCHHH
Confidence 777644 667777888999999999999776553310 1 1233 123688899998653
No 7
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=3.9e-41 Score=352.48 Aligned_cols=243 Identities=23% Similarity=0.345 Sum_probs=206.5
Q ss_pred CCcHHHHHHHHHhcCCCeeeChhhhhhccCCCCCcCcCCCCCcEEEEcCCHHHHHHHHHHHHh-CCCCeeeeCCCCCCCc
Q 015664 110 EIPQELVDELKAICQDDMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDK-HKVPIIPYGGATSIEG 188 (403)
Q Consensus 110 ~~~~~~~~~L~~~lg~~v~~~~~~~~~~~~~~~s~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~-~~~pv~~~GgG~s~~g 188 (403)
.+.++++++|+ +.++|.+|+..+..|++++.+. ....|.+|++|+|++||+++|++|++ +++|++++|||||+.|
T Consensus 25 ~~~~~~~~~l~--~~~~v~~d~~~~~~~~~d~~~~--~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g 100 (524)
T 2exr_A 25 KSTDGVSESLN--IQGEILCGGAAADIAGRDFGGM--NCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSING 100 (524)
T ss_dssp ---------CC--CSSEEECSHHHHHHHTCCTTCC--CCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSS
T ss_pred ccHHHHHHhcC--CCCeEEeCHHHHHHHhcccccc--ccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCC
Confidence 45566788888 4678999998888898875443 34689999999999999999999996 9999999999999999
Q ss_pred ccccCCCcEEEEcCCCCCcEEeee-----cC--cEEEEccCCCHHHHH-HHHhcCCCeecCCCC--cccccccccccccc
Q 015664 189 HTLSPNGGVCIDLSLMKSVKALHI-----ED--MDVVVEPGIGWMELN-EYLEPYGLFFPLDPG--PGATIGGMCATRCS 258 (403)
Q Consensus 189 ~~~~~~~gvvIdl~~mn~i~~id~-----~~--~~v~VeaGv~~~~L~-~~l~~~Gl~~p~~~~--~~~TvGG~ia~n~~ 258 (403)
++.+. +||+|||++||+| ++|+ ++ .+++||||++|.++. +.++++|+. |.++. ..+||||++++|++
T Consensus 101 ~~~~~-~gvvidl~~m~~i-~i~~~~~~~~~~~~~v~v~aGv~~~~l~~~~l~~~Gl~-~~~~~s~~~~tiGG~va~ng~ 177 (524)
T 2exr_A 101 QAMAE-GGLVVDMSTTAEN-HFEVGYLSGGDATAFVDVSGGALWEDVLKRCVSEYGLA-PRSWTDYLGLTVGGTLSNAGV 177 (524)
T ss_dssp TTCCT-TSEEEEGGGGTTS-CEEEEECCSSSSSEEEEEETTCBHHHHHHHHHHHHSEE-CSCCCSCCSSBHHHHHTTCCC
T ss_pred cccCC-CEEEEECcCCCCc-EEeecccCCCCCceEEEEeCCcCHHHHHHHHHHHcCCC-CCCCCcCCceeecccCCCCCC
Confidence 88764 7999999999999 7887 55 799999999999974 556699998 55543 35999999999999
Q ss_pred CCCccccccccceEEEEEEEeCCCeEEEcccccccccccccchhhhhccCCceeEEEEEEEEeEecCCccEEEEEeCCCH
Q 015664 259 GSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTI 338 (403)
Q Consensus 259 G~~s~~yG~~~D~V~~levV~~dG~iv~~~~~~~~~~~g~dL~~~~~Gs~GtlGIIT~~tLkl~p~p~~~~~~~~~f~~~ 338 (403)
|..+.+||.++|+|+++|||++||++++++.. .++||+|+++||+|+|||||+++|||+|.|+......+.|+++
T Consensus 178 G~~~~~yG~~~d~V~~l~vV~~dG~v~~~~~~-----~~~dL~~~~~Gs~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~ 252 (524)
T 2exr_A 178 SGQAFRYGPQTSNVTELDVVTGNGDVVTCSEI-----ENSELFFSVLGGLGQFGIITRARVLLQPAPDMVRWIRVVYTEF 252 (524)
T ss_dssp CTTHHHHCCGGGSEEEEEEEETTSCEEEEESS-----SSHHHHHHHTTCTTSSEEEEEEEEEEEECCSEEEEEEEEESCH
T ss_pred cccccccCcHhhhEEEEEEEecCCeEEEECCC-----CChhHHhHhhcCCCccEEEEEEEEEEEEcCCeeEEEEEEeCCH
Confidence 99999999999999999999999999988653 3789999999999999999999999999999888888999999
Q ss_pred HHHHHHHHHHHHcCCCceEEEecCHHH
Q 015664 339 KDAADVAIATMLSGIQVSRVELLDEVQ 365 (403)
Q Consensus 339 ~~a~~~~~~i~~~~~~~~~~e~~D~~~ 365 (403)
+++.+++..+++.+.. ..+|++|...
T Consensus 253 ~~~~~~~~~l~~~~~~-~~~e~~d~~~ 278 (524)
T 2exr_A 253 DEFTQDAEWLVSQKNE-SSFDYVEGFV 278 (524)
T ss_dssp HHHHHHHHHHHTSCTT-SSCSEEEEEE
T ss_pred HHHHHHHHHHHHcCCc-chhHhhchhh
Confidence 9999999999888776 6788888754
No 8
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=3.9e-40 Score=345.69 Aligned_cols=247 Identities=15% Similarity=0.236 Sum_probs=209.5
Q ss_pred cHHHHHHHHH-hcCCCeeeChhhhhhccCCCCCcCcCCCCCcEEEEcCCHHHHHHHHHHHHh--C-CCCeeeeCCCCCCC
Q 015664 112 PQELVDELKA-ICQDDMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDK--H-KVPIIPYGGATSIE 187 (403)
Q Consensus 112 ~~~~~~~L~~-~lg~~v~~~~~~~~~~~~~~~s~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~--~-~~pv~~~GgG~s~~ 187 (403)
+++++++|++ .+.+++.+++.....|..+++.. ....|.+|++|+|++||+++|++|++ + ++|++++|+|||+.
T Consensus 31 ~~~~~~~l~~~~~~~~v~~~~~~~~~~~~d~~~~--~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~v~~~G~G~~~~ 108 (534)
T 1w1o_A 31 GRPWPASLAALALDGKLRTDSNATAAASTDFGNI--TSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLM 108 (534)
T ss_dssp ---------CTTTTTCEECSHHHHHHTSCCTTCS--CCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCCEEEESSCCCSS
T ss_pred hHHHHHHHHhcCCCceEecCHHHHHHHhcccccc--ccCCCCEEEecCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC
Confidence 3467888998 55578999888888887775432 45789999999999999999999998 6 99999999999999
Q ss_pred cccccCCCcEEEEcCCCCCc-----EEeeecCcEEEEccCCCHHHHHHHHhcCCCeecCCCC-ccccccccccccccCCC
Q 015664 188 GHTLSPNGGVCIDLSLMKSV-----KALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPG-PGATIGGMCATRCSGSL 261 (403)
Q Consensus 188 g~~~~~~~gvvIdl~~mn~i-----~~id~~~~~v~VeaGv~~~~L~~~l~~~Gl~~p~~~~-~~~TvGG~ia~n~~G~~ 261 (403)
|++.+. +|++|||++||+| +++|+++.+++||||++|.+|++++.++|+..+..++ ..+||||++++|++|..
T Consensus 109 g~~~~~-~gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~Gl~~~~~~~~~~~tvGG~v~~~g~g~~ 187 (534)
T 1w1o_A 109 GQAFAP-GGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQ 187 (534)
T ss_dssp STTCCT-TSEEEEGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTTEEESCCCSSCCSBHHHHHTTCCCSTT
T ss_pred CCcCCC-CeEEEECccccccccCccEEEcCCCCEEEECCCcCHHHHHHHHHHCCCcccCCCCCCCEEeceeccCCCcccc
Confidence 888764 7999999999998 7899888999999999999999999999997444333 36999999999999999
Q ss_pred ccccccccceEEEEEEEeCCCeEEEcccccccccccccchhhhhccCCceeEEEEEEEEeEecCCccEEEEEeCCCHHHH
Q 015664 262 AVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTIKDA 341 (403)
Q Consensus 262 s~~yG~~~D~V~~levV~~dG~iv~~~~~~~~~~~g~dL~~~~~Gs~GtlGIIT~~tLkl~p~p~~~~~~~~~f~~~~~a 341 (403)
+.+||.++|+|+++|||++||++++++.. .++||+|+++||+|+|||||+++||++|.|+......+.|++++++
T Consensus 188 ~~~yG~~~d~v~~~evV~~dG~v~~~~~~-----~~~dL~~~~rGs~G~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~ 262 (534)
T 1w1o_A 188 AFRHGPQISNVLEMDVITGHGEMVTCSKQ-----LNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRFVYTDFAAF 262 (534)
T ss_dssp HHHHCCGGGSEEEEEEEETTSCEEEEESS-----SSHHHHHHHTTCTTCSEEEEEEEEEEEECCSEEEEEEEEESCHHHH
T ss_pred ccccccHhhhEEEEEEEeCCccEEEECCC-----CChhhHhhhcCCCCCcEEEEEEEEEEEECCcceEEEEEEeCCHHHH
Confidence 99999999999999999999999988653 3789999999999999999999999999999877888899999999
Q ss_pred HHHHHHHHHcCC-----CceEEEecCHHHH
Q 015664 342 ADVAIATMLSGI-----QVSRVELLDEVQV 366 (403)
Q Consensus 342 ~~~~~~i~~~~~-----~~~~~e~~D~~~~ 366 (403)
.+.+..+...+. .+.++|+||...+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~e~~d~~~~ 292 (534)
T 1w1o_A 263 SADQERLTAPRPGGGGASFGPMSYVEGSVF 292 (534)
T ss_dssp HHHHHHHHCBC------CBCSCSEEEEEEE
T ss_pred HHHHHHHHhcccccccccccchhHhhhhhh
Confidence 888888777766 5788999987543
No 9
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=4.6e-36 Score=312.41 Aligned_cols=228 Identities=22% Similarity=0.276 Sum_probs=184.8
Q ss_pred cHHHHHHHHHhcCCC-eeeChhhhhh-----ccCC-CCCcCcCCCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCC
Q 015664 112 PQELVDELKAICQDD-MTMDYEERYI-----HGKP-QNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGAT 184 (403)
Q Consensus 112 ~~~~~~~L~~~lg~~-v~~~~~~~~~-----~~~~-~~s~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~ 184 (403)
.+++++.|.+.++.+ |.++.+..+. +..+ .++ .....+|.+||+|++++||+++|++|+++++||.+|||||
T Consensus 8 ~~~f~~~L~~~~~~~~v~~~~~~~y~~~~~~~~~n~rw~-~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~~~~r~gGh 86 (500)
T 3tsh_A 8 KEDFLGCLVKEIPPRLLYAKSSPAYPSVLGQTIRNSRWS-SPDNVKPLYIITPTQVSHIQSAVVCGRRHSVRIRVRSGGH 86 (500)
T ss_dssp -CHHHHHHHHHSCGGGEEETTSTTHHHHHHTTCCCTTTT-STTSCCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCC
T ss_pred HHHHHHHHHhhCCCCEEECCCCCccHHHHHhhhcccccc-CCCCCCceEEEEcCCHHHHHHHHHHHHHCCCcEEEEcCCc
Confidence 457899999998864 5555443321 1111 111 1234689999999999999999999999999999999999
Q ss_pred CCCcccc---cCCCcEEEEcCCCCCcEEeeecCcEEEEccCCCHHHHHHHHhcCCCe--ecCCCCccccccccccccccC
Q 015664 185 SIEGHTL---SPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLF--FPLDPGPGATIGGMCATRCSG 259 (403)
Q Consensus 185 s~~g~~~---~~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~~~L~~~l~~~Gl~--~p~~~~~~~TvGG~ia~n~~G 259 (403)
++.|.+. ..++|++|||++||+| ++|+++.+++||||++|.+|+++|.++|+. ++.+.++.+++||++.+|++|
T Consensus 87 ~~~g~s~~~~~~~~~~~idl~~~~~v-~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg~g 165 (500)
T 3tsh_A 87 DYEGLSYRSLQPETFAVVDLNKMRAV-WVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNFAGGGFG 165 (500)
T ss_dssp CTTCTTTCCSSSCCEEEEECTTCCCE-EEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHHHTCCCC
T ss_pred CCCCCcCCCCCcCCeEEEECcCCCCE-EECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCccccccCC
Confidence 9887553 3467999999999998 699999999999999999999999999965 555666778999999999999
Q ss_pred CCccccccccceEEEEEEEeCCCeEEEcccccccccccccchhhhhc-cCCceeEEEEEEEEeEecCCccEEEEEeCCCH
Q 015664 260 SLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIG-SEGTLGIITEVTLRLQKIPQHSVVATCNFPTI 338 (403)
Q Consensus 260 ~~s~~yG~~~D~V~~levV~~dG~iv~~~~~~~~~~~g~dL~~~~~G-s~GtlGIIT~~tLkl~p~p~~~~~~~~~f~~~ 338 (403)
..+++||.++|+|+++|||++||+++.... .+.||||+++| ++|+|||||+++||++|.|+....+...+...
T Consensus 166 ~~~~~~G~~~d~v~~~~vV~a~G~i~~~~~------~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~ 239 (500)
T 3tsh_A 166 MLLRKYGIAAENVIDVKLVDANGKLHDKKS------MGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVS 239 (500)
T ss_dssp TTHHHHCCGGGGEEEEEEECTTSCEECHHH------HCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETT
T ss_pred ccccccCChhhheeeEEEECCCceEEECCC------CChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcH
Confidence 999999999999999999999999885322 36799999995 56799999999999999999876666655544
Q ss_pred HHHHHHHHH
Q 015664 339 KDAADVAIA 347 (403)
Q Consensus 339 ~~a~~~~~~ 347 (403)
+.+.+++..
T Consensus 240 ~~~~~~~~~ 248 (500)
T 3tsh_A 240 EGAVDIINK 248 (500)
T ss_dssp TTHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555555443
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=5.1e-35 Score=301.53 Aligned_cols=198 Identities=21% Similarity=0.330 Sum_probs=176.5
Q ss_pred cCCCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCcccccCCCcEEEEcCCCCCcEEeeecCcEEEEccCCCH
Q 015664 146 KAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGW 225 (403)
Q Consensus 146 ~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~~~~~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~ 225 (403)
+....|.+|++|++++||+++|++|+++++|+.++|||||+.|.+. ..+|++|||++||+| ++|+++.+++||||++|
T Consensus 34 ~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~-~~~gvvi~l~~l~~i-~~d~~~~~v~v~aG~~~ 111 (459)
T 2bvf_A 34 RHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYAT-NDGGIVLDLRLMNSI-HIDTAGSRARIGGGVIS 111 (459)
T ss_dssp TCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTC-CSSSEEEECTTCCCE-EEETTTTEEEEETTCBH
T ss_pred hccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCccc-cCCeEEEECCCCCCE-EECCCCCEEEECCCCCH
Confidence 4567899999999999999999999999999999999999988764 457999999999999 69999999999999999
Q ss_pred HHHHHHHhcCCCeecCCCCccccccccccccccCCCccccccccceEEEEEEEeCCCeEEEcccccccccccccchhhhh
Q 015664 226 MELNEYLEPYGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLII 305 (403)
Q Consensus 226 ~~L~~~l~~~Gl~~p~~~~~~~TvGG~ia~n~~G~~s~~yG~~~D~V~~levV~~dG~iv~~~~~~~~~~~g~dL~~~~~ 305 (403)
.+|+++|.++|+.+|.+.++.++|||++.++++|+++++||.++|+|+++|||++||++++++.. .++||||+++
T Consensus 112 ~~l~~~l~~~Gl~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~~~vV~~~G~i~~~~~~-----~~~dLf~a~r 186 (459)
T 2bvf_A 112 GDLVKEAAKFGLAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNILGATLVTATGDVIYCSDD-----ERPELFWAVR 186 (459)
T ss_dssp HHHHHHHHTTTEEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEEEEEECTTSCEEEEESS-----SSHHHHHHHH
T ss_pred HHHHHHHHHcCCEecCCCCCCcccceeecCCCCccccccccCHhHhEEEEEEEcCCCeEEEeCCC-----CChhhHhHhh
Confidence 99999999999999988888899999999999999999999999999999999999999987653 2689999999
Q ss_pred ccCCceeEEEEEEEEeEecCCccEEEEEeCCC--HH--HHHHHHHHHHH
Q 015664 306 GSEGTLGIITEVTLRLQKIPQHSVVATCNFPT--IK--DAADVAIATML 350 (403)
Q Consensus 306 Gs~GtlGIIT~~tLkl~p~p~~~~~~~~~f~~--~~--~a~~~~~~i~~ 350 (403)
|++|+|||||+++||++|.|+......+.|+. .+ ++++.+.++..
T Consensus 187 g~~g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (459)
T 2bvf_A 187 GAGPNFGVVTEVEVQLYELPRKMLAGFITWAPSVSELAGLLTSLLDALN 235 (459)
T ss_dssp HHGGGTCEEEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred ccCCccEEEEEEEEEEEECCCcEEEEEEEechHHhhHHHHHHHHHHHHH
Confidence 99999999999999999997766666666654 44 55566555544
No 11
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=1.1e-34 Score=300.22 Aligned_cols=206 Identities=21% Similarity=0.231 Sum_probs=177.0
Q ss_pred CCeeeChhhhhhccCCCCCcCcCCCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCccccc-CCCcEEEEcCC
Q 015664 125 DDMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLS-PNGGVCIDLSL 203 (403)
Q Consensus 125 ~~v~~~~~~~~~~~~~~~s~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~~~~-~~~gvvIdl~~ 203 (403)
..++++.+..+......+ ..+....|.+||+|+|++||+++|++|+++++|+.++|||||+.|.+.. .+++++|||++
T Consensus 12 ~~v~~p~~~~y~~~~~~~-n~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~~~vvIdl~~ 90 (473)
T 3rja_A 12 VPIDIPGTADYERDVEPF-NIRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSGGHSYASFGFGGENGHLMVQLDR 90 (473)
T ss_dssp CCBCCTTSHHHHHHTCCS-BTTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCTTCGGGTSSSSCEEEECTT
T ss_pred CcEECCCCCchHHHHHHh-hcccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEcCCCCCCCCcccCCCCeEEEECCC
Confidence 345555554443222111 2245689999999999999999999999999999999999999865543 35789999999
Q ss_pred CCCcEEeeecCcEEEEccCCCHHHHHHHHhcCC-CeecCCCCccccccccccccccCCCccccccccceEEEEEEEeCCC
Q 015664 204 MKSVKALHIEDMDVVVEPGIGWMELNEYLEPYG-LFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANG 282 (403)
Q Consensus 204 mn~i~~id~~~~~v~VeaGv~~~~L~~~l~~~G-l~~p~~~~~~~TvGG~ia~n~~G~~s~~yG~~~D~V~~levV~~dG 282 (403)
||+|.++|+++.+++||||++|.+|+++|.++| +.+|.+.++.++|||.+++|++|..+++||.++|+|+++|||++||
T Consensus 91 ~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G~~~~p~G~~~~vgvgG~~~ggg~G~~~~~~G~~~D~v~~~~vV~a~G 170 (473)
T 3rja_A 91 MIDVISYNDKTGIAHVEPGARLGHLATVLNDKYGRAISHGTCPGVGISGHFAHGGFGFSSHMHGLAVDSVVGVTVVLADG 170 (473)
T ss_dssp CCCEEEEETTTTEEEECTTCBHHHHHHHHHHHHSEECCCCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTS
T ss_pred CCceEEEcCCCCEEEECCCCCHHHHHHHHHHcCCEEeccCCCCCcEeeeeccCCCCCcccccccchHhheeeEEEEecCC
Confidence 999987999999999999999999999999999 7788877788999999999999999999999999999999999999
Q ss_pred eEEEcccccccccccccchhhhhccCCceeEEEEEEEEeEecCCccEEEEEeCC
Q 015664 283 DVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFP 336 (403)
Q Consensus 283 ~iv~~~~~~~~~~~g~dL~~~~~Gs~GtlGIIT~~tLkl~p~p~~~~~~~~~f~ 336 (403)
++++++.. .++||||+++|++|+|||||+++|||+|.|+....+.+.|+
T Consensus 171 ~v~~~~~~-----~~~dLf~a~rG~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~ 219 (473)
T 3rja_A 171 RIVEASAT-----ENADLFWGIKGAGSNFGIVAVWKLATFPAPKVLTRFGVTLN 219 (473)
T ss_dssp CEEEEETT-----BSHHHHHHHHHHGGGTCEEEEEEEECEECCSCEEEEEEECC
T ss_pred eEEEeCCC-----CCcchhhcccCCCCceEEEEEEEEEEEeCCCceEEEEEEec
Confidence 99987653 37899999999999999999999999999987666655443
No 12
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=1.5e-34 Score=301.24 Aligned_cols=212 Identities=18% Similarity=0.232 Sum_probs=176.4
Q ss_pred HHHHHHhcCC---CeeeChhhhhhccCCCCCcCcCCCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCccccc
Q 015664 116 VDELKAICQD---DMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLS 192 (403)
Q Consensus 116 ~~~L~~~lg~---~v~~~~~~~~~~~~~~~s~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~~~~ 192 (403)
+++|++.++. .+....+..+......+. .+....|.+||+|++++||+++|++|+++++|+.++|||||+.+.+.+
T Consensus 6 ~~~l~~~l~~~~~~~~~~~~~~y~~~~~~~~-~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~~ 84 (503)
T 1zr6_A 6 FNSINACLAAADVEFHEEDSEGWDMDGTAFN-LRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISAKGGGHSYGSYGFG 84 (503)
T ss_dssp TCHHHHHHHHTTCEECCTTSHHHHHHTSCSB-GGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTTT
T ss_pred HHHHHHhhCcCCceecCCCccchHHHhhhhh-hcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCCccc
Confidence 3556666652 233333333332222221 245679999999999999999999999999999999999999886654
Q ss_pred -CCCcEEEEcCCCCCcEEeeecCcEEEEccCCCHHHHHHHHhcC-CCeecCCCCccccccccccccccCCCccccccccc
Q 015664 193 -PNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPY-GLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRD 270 (403)
Q Consensus 193 -~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~~~L~~~l~~~-Gl~~p~~~~~~~TvGG~ia~n~~G~~s~~yG~~~D 270 (403)
.++|++|||++||+| ++| ++.+++||||++|.+|+++|.++ |+.+|.+.++.++|||.+.++++|+++++||.++|
T Consensus 85 ~~~~gvvIdl~~l~~i-~~d-~~~~v~v~aG~~~~~l~~~l~~~~gl~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D 162 (503)
T 1zr6_A 85 GEDGHLMLELDRMYRV-SVD-DNNVATIQGGARLGYTALELLDQGNRALSHGTCPAVGVGGHVLGGGYGFATHTHGLTLD 162 (503)
T ss_dssp SSSSCEEEECTTCCCE-EEC-TTSCEEEETTCBHHHHHHHHHHTTSEECCCCSCTTSBHHHHHHHCCCSTTHHHHCCGGG
T ss_pred CCCCcEEEECccCCCE-EEC-CCCeEEEecCCCHHHHHHHHHHcCCEEeCCCCCCcCchhhhhcCCCCCcccccccChhh
Confidence 457999999999999 799 88899999999999999999666 58898877778889999999999999999999999
Q ss_pred eEEEEEEEeCCCeEEEcccccccccccccchhhhhccCCceeEEEEEEEEeEecCCccEEEEEeC
Q 015664 271 NVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNF 335 (403)
Q Consensus 271 ~V~~levV~~dG~iv~~~~~~~~~~~g~dL~~~~~Gs~GtlGIIT~~tLkl~p~p~~~~~~~~~f 335 (403)
+|+++|||++||++++++.. .++||||+++|++|+|||||+++||++|.|+....+.+.|
T Consensus 163 ~v~~~~vV~a~G~i~~~~~~-----~~~dL~~a~rG~~g~~GIVt~~~l~l~p~~~~~~~~~~~~ 222 (503)
T 1zr6_A 163 WLIGATVVLADASIVHVSET-----ENADLFWALRGGGGGFAIVSEFEFNTFEAPEIITTYQVTT 222 (503)
T ss_dssp GEEEEEEECTTSCEEEEBTT-----BSHHHHHHHTTCCSSSCEEEEEEECCEECCSCEEEEEEEE
T ss_pred eEEEEEEEecCCCEEEeCCC-----CCccHHHHHhccCCCcEEEEEEEEEEEecCceeEEEEEEE
Confidence 99999999999999987643 3789999999999999999999999999998665555444
No 13
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=2.7e-34 Score=298.44 Aligned_cols=194 Identities=26% Similarity=0.359 Sum_probs=173.0
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCcccccCC-CcEEEEcCCCCCcEEeeecCcEEEEccCCCHH
Q 015664 148 VNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPN-GGVCIDLSLMKSVKALHIEDMDVVVEPGIGWM 226 (403)
Q Consensus 148 ~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~~~~~~-~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~~ 226 (403)
...|++|++|++++||+++|++|+++++|+.++|||||+.|.++..+ +|++|||++|++| ++|+++.+++||||++|.
T Consensus 43 ~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrGgGh~~~g~~~~~~~ggvvIdl~~m~~i-~vd~~~~~v~V~aG~~l~ 121 (495)
T 3fw9_A 43 ISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSGGHSYEGLSYTSDTPFILIDLMNLNRV-SIDLESETAWVESGSTLG 121 (495)
T ss_dssp SCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEESSCCCTTCTTSCCSSCEEEEECTTCCCE-EEETTTTEEEEETTCBHH
T ss_pred CCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCccccCCCCeEEEECCCCCcE-EEeCCCCEEEEcCCCCHH
Confidence 46899999999999999999999999999999999999998887643 6899999999999 799999999999999999
Q ss_pred HHHHHHhcC--CCeecCCCCccccccccccccccCCCccccccccceEEEEEEEeCCCeEEEcccccccccccccchhhh
Q 015664 227 ELNEYLEPY--GLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLI 304 (403)
Q Consensus 227 ~L~~~l~~~--Gl~~p~~~~~~~TvGG~ia~n~~G~~s~~yG~~~D~V~~levV~~dG~iv~~~~~~~~~~~g~dL~~~~ 304 (403)
+|+++|.++ |+.+|.+.+..++|||.++++++|..+++||.++|+|++++||++||++++ . ...++||+|++
T Consensus 122 ~l~~~l~~~g~gl~~~~G~~~~vgigG~~~gGg~G~~~~~~G~~~D~v~~~~vV~adG~i~~-~-----~~~~~DLf~a~ 195 (495)
T 3fw9_A 122 ELYYAITESSSKLGFTAGWCPTVGTGGHISGGGFGMMSRKYGLAADNVVDAILIDANGAILD-R-----QAMGEDVFWAI 195 (495)
T ss_dssp HHHHHHHHHCSSEECCCCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTCCEEC-H-----HHHCHHHHHHH
T ss_pred HHHHHHHHhcCCceeccCCCCCCeEeeeccCCCCcccccCCCchhheEEEEEEEcCCCCEEE-c-----CCCChhhhhhh
Confidence 999999999 788888777789999999999999999999999999999999999999996 1 12378999999
Q ss_pred hc-cCCceeEEEEEEEEeEecCCccEEEEEeCC-CHHHHHHHHHHH
Q 015664 305 IG-SEGTLGIITEVTLRLQKIPQHSVVATCNFP-TIKDAADVAIAT 348 (403)
Q Consensus 305 ~G-s~GtlGIIT~~tLkl~p~p~~~~~~~~~f~-~~~~a~~~~~~i 348 (403)
+| ++|+|||||+++|||+|.|+....+.+.|+ +.+++.+++..+
T Consensus 196 rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~~l~~~ 241 (495)
T 3fw9_A 196 RGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSLLHKW 241 (495)
T ss_dssp TTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHHHHHHH
T ss_pred hcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHHHHHHH
Confidence 98 789999999999999999998777666664 345665555444
No 14
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=100.00 E-value=8.9e-34 Score=293.64 Aligned_cols=198 Identities=17% Similarity=0.303 Sum_probs=179.4
Q ss_pred cCCCCCcEEEEcCCHHHHHHHHHHHHhC--CCCeeeeCCCCCCCcccccCCCcEEEEcCCCCCcEEeeecCcEEEEccCC
Q 015664 146 KAVNIPDIIVFPRSEDEVSKIVKCCDKH--KVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGI 223 (403)
Q Consensus 146 ~~~~~P~~Vv~P~s~eeV~~iv~~a~~~--~~pv~~~GgG~s~~g~~~~~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv 223 (403)
+....|.+|++|+|++||+++|++|+++ ++|+.++|+|||+.+.+.. ++|++|||++||+|+++|+++.+|+||||+
T Consensus 38 ~~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~~-~~gvvIdl~~l~~i~~~d~~~~~v~v~aGv 116 (481)
T 4feh_A 38 RTAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQN-GGGLVIDMTPLNTIHSIDADTKLVDIDAGV 116 (481)
T ss_dssp CCSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTCC-TTSEEEECTTCCCEEEEETTTTEEEEETTC
T ss_pred CCCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCCC-cCeEEEECccCCCceEEcCCCCEEEEcCCc
Confidence 4568999999999999999999999999 7999999999999776653 579999999999998999999999999999
Q ss_pred CHHHHHHHHhcCCCeecCCCCc-cccccccccccccCCCccccccccceEEEEEEEeCCCeEEEcccccccccccccchh
Q 015664 224 GWMELNEYLEPYGLFFPLDPGP-GATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTR 302 (403)
Q Consensus 224 ~~~~L~~~l~~~Gl~~p~~~~~-~~TvGG~ia~n~~G~~s~~yG~~~D~V~~levV~~dG~iv~~~~~~~~~~~g~dL~~ 302 (403)
+|.+|+++|.++|+++|+.++. .+||||++++|+||..+.+||.+.|+|+++|+|++||++++++... .++||||
T Consensus 117 ~l~~L~~~l~~~Gl~l~~~~g~~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~~~----~~~dLf~ 192 (481)
T 4feh_A 117 NLDQLMKAALPFGLWVPVLPGTRQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPTG----EDAELFW 192 (481)
T ss_dssp BHHHHHHHHGGGTEECSCCCSCSCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECSSS----TTHHHHH
T ss_pred cHHHHHHHHHHcCCEEEEeCCcCccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCCCC----CChHHHH
Confidence 9999999999999999988776 5899999999999998899999999999999999999999986541 3689999
Q ss_pred hhhccCCceeEEEEEEEEeEecCCccE-EEEEeCCCHHHHHHHHHHH
Q 015664 303 LIIGSEGTLGIITEVTLRLQKIPQHSV-VATCNFPTIKDAADVAIAT 348 (403)
Q Consensus 303 ~~~Gs~GtlGIIT~~tLkl~p~p~~~~-~~~~~f~~~~~a~~~~~~i 348 (403)
+++|++|++||||+++||++|.|+... .....+.+++++++.+.+.
T Consensus 193 a~rgs~G~~GIIt~~tl~l~p~~~~~~~~~~~~~~~l~~~~~~~~~~ 239 (481)
T 4feh_A 193 ATVGGNGLTGIIMRATIEMTPTSTAYFIADGDVTASLDETIALHSDG 239 (481)
T ss_dssp HHTTCTTTTCEEEEEEEECEECSCSEEEEEEEECSSHHHHHHHHSSS
T ss_pred HhhccCCCceEEEEEEEEEEeCCccEEEEEEEeCCCHHHHHHHHHHH
Confidence 999999999999999999999986543 4467889999998887643
No 15
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=1.8e-33 Score=293.40 Aligned_cols=195 Identities=24% Similarity=0.352 Sum_probs=170.2
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCccccc-CCCcEEEEcCCCCCcEEeeecCcEEEEccCCCHH
Q 015664 148 VNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLS-PNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWM 226 (403)
Q Consensus 148 ~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~~~~-~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~~ 226 (403)
...|.+||+|++++||+++|++|+++++|+.++|||||+.|.+.. ..+|++|||++||+| ++|+++.+++||||++|.
T Consensus 51 ~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~~~gvvIdl~~l~~i-~vd~~~~~v~V~aG~~l~ 129 (518)
T 3vte_A 51 TPKPLVIVTPSNNSHIQATILCSKKVGLQIRTRSGGHDAEGMSYISQVPFVVVDLRNMHSI-KIDVHSQTAWVEAGATLG 129 (518)
T ss_dssp SCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCTTCTTTCCSSSEEEEECTTCCCE-EEETTTTEEEEETTCBHH
T ss_pred CCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEECCCcCCCCCccCCCCCeEEEECCCCcee-EEeCCCCEEEEeCCccHH
Confidence 468999999999999999999999999999999999999887753 357999999999999 699999999999999999
Q ss_pred HHHHHHhcC--CCeecCCCCccccccccccccccCCCccccccccceEEEEEEEeCCCeEEEcccccccccccccchhhh
Q 015664 227 ELNEYLEPY--GLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLI 304 (403)
Q Consensus 227 ~L~~~l~~~--Gl~~p~~~~~~~TvGG~ia~n~~G~~s~~yG~~~D~V~~levV~~dG~iv~~~~~~~~~~~g~dL~~~~ 304 (403)
+|+++|.++ |+.++.+.+..++|||.++++++|..+++||.++|+|+++|||++||++++.. ..++||||++
T Consensus 130 ~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~gGg~G~~s~~~G~~~D~V~~~evV~adG~iv~~~------~~~~DLf~a~ 203 (518)
T 3vte_A 130 EVYYWINEKNENLSFPGGYCPTVGVGGHFSGGGYGALMRNYGLAADNIIDAHLVNVDGKVLDRK------SMGEDLFWAI 203 (518)
T ss_dssp HHHHHHHHHCTTEECCCCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTCCEECHH------HHCHHHHHHH
T ss_pred HHHHHHHHhCCCceecCCCCCCeeeeeeeCCCCCccccCCCCchhheEEEEEEEccCCeEEEee------ccccchhhhe
Confidence 999999987 56677777778999999999999999999999999999999999999999531 2368999999
Q ss_pred hcc-CCceeEEEEEEEEeEecCCccEEEEEeCC-CHHHHHHHHHHHH
Q 015664 305 IGS-EGTLGIITEVTLRLQKIPQHSVVATCNFP-TIKDAADVAIATM 349 (403)
Q Consensus 305 ~Gs-~GtlGIIT~~tLkl~p~p~~~~~~~~~f~-~~~~a~~~~~~i~ 349 (403)
+|+ +|+|||||+++|||+|.|+....+.+.+. +.+++.+++..+.
T Consensus 204 rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~l~~~~ 250 (518)
T 3vte_A 204 RGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIHGLVKLFNKWQ 250 (518)
T ss_dssp TTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHHHHHHHHHHHH
T ss_pred ecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHHHHHHHHHHHH
Confidence 998 89999999999999999987666555543 4456666555443
No 16
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=2.2e-33 Score=293.74 Aligned_cols=190 Identities=23% Similarity=0.323 Sum_probs=165.7
Q ss_pred cCCCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCcccccCCCcEEEEcCCCCCcEEeeecCcEEEEccCCCH
Q 015664 146 KAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGW 225 (403)
Q Consensus 146 ~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~~~~~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~ 225 (403)
+....|.+||+|++++||+++|++|+++++||.++||||++.|.+...++|++|||++||+| ++|+++.+++||||++|
T Consensus 53 ~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~~~gvvIdl~~m~~i-~~d~~~~~v~v~aG~~~ 131 (523)
T 2wdx_A 53 RFNGEPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGGHCFEDFVDNPDVKVIIDMSLLTEI-AYDPSMNAFLIEPGNTL 131 (523)
T ss_dssp TCCCCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCCCSSSSSSSTTCCEEEECTTCCCE-EEETTTTEEEECTTCBH
T ss_pred cccCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCccCCCCeEEEEcccCCCE-EEcCCCCEEEEcCCCCH
Confidence 34578999999999999999999999999999999999999988766568999999999999 79999999999999999
Q ss_pred HHHHHHHh-cCCCeecCCCCccccccccccccccCCCccccccccceEEEEEEEeCC--CeEEEcccccccccccccchh
Q 015664 226 MELNEYLE-PYGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLAN--GDVVKTASRARKSAAGYDLTR 302 (403)
Q Consensus 226 ~~L~~~l~-~~Gl~~p~~~~~~~TvGG~ia~n~~G~~s~~yG~~~D~V~~levV~~d--G~iv~~~~~~~~~~~g~dL~~ 302 (403)
.+|+++|. ++|+.++.+.+..++|||+++++++|+++++||.++|+|+++|||++| |+++++.....+...++||||
T Consensus 132 ~~l~~~l~~~~Gl~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV~~d~~G~v~~~~~~~~~~~~~~DLf~ 211 (523)
T 2wdx_A 132 SEVYEKLYLGWNVTIPGGVCGGVGVGGHICGGGYGPLSRQFGSVVDYLYAVEVVVVNKQGKARVIVATRERDDPHHDLWW 211 (523)
T ss_dssp HHHHHHHHHHHSCCCCCCCCTTCBHHHHHHHTCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHH
T ss_pred HHHHHHHHHhcCeEEccCCCCCCeeCccccCCCCCcccccccChhheEEEEEEEEecCCccEEEEecccccCCCChHHHH
Confidence 99999998 499999987777889999999999999999999999999999999955 998654322222334567999
Q ss_pred hhhc-cCCceeEEEEEEEEe-----------EecCCc-cEEEEEeCC
Q 015664 303 LIIG-SEGTLGIITEVTLRL-----------QKIPQH-SVVATCNFP 336 (403)
Q Consensus 303 ~~~G-s~GtlGIIT~~tLkl-----------~p~p~~-~~~~~~~f~ 336 (403)
+++| ++|+|||||+++||+ +|.|+. .....+.|+
T Consensus 212 a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~~ 258 (523)
T 2wdx_A 212 AHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPPATLLTSTVTFD 258 (523)
T ss_dssp HTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCCSEEEEEEEECC
T ss_pred HhhccCCCCcEEEEEEEEEeecccCCCcccccCCCcccEEEEEEEec
Confidence 9996 469999999999999 998764 455566665
No 17
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=2.8e-33 Score=292.77 Aligned_cols=189 Identities=22% Similarity=0.305 Sum_probs=164.5
Q ss_pred cCCCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCcccccCCCcEEEEcCCCCCcEEeeecCcEEEEccCCCH
Q 015664 146 KAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGW 225 (403)
Q Consensus 146 ~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~~~~~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~ 225 (403)
+....|.+||+|++++||+++|++|+++++|+.++||||++.|.+...++|++|||++||+| ++|+++.+++||||++|
T Consensus 51 ~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGh~~~g~~~~~~~gvvIdl~~l~~i-~~d~~~~~v~v~aG~~~ 129 (521)
T 2ipi_A 51 RFRGRPDVVYVVHTADQVVDAVNQAMAAGQRIAVRSGGHCFEGFVDDPAVRAVIDMSQMRQV-FYDSGKRAFAVEPGATL 129 (521)
T ss_dssp TCCCCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCCCTTCGGGCTTCCEEEECTTCCCE-EEETTTTEEEECTTSBH
T ss_pred cccCCCCEEEEcCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCCcccCCCeEEEecccCCCe-EEeCCCCEEEEeCCcCH
Confidence 34678999999999999999999999999999999999999887765568999999999999 79999999999999999
Q ss_pred HHHHHHHh-cCCCeecCCCCccccccccccccccCCCccccccccceEEEEEEEeCC--CeEEEcccccccccccccchh
Q 015664 226 MELNEYLE-PYGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLAN--GDVVKTASRARKSAAGYDLTR 302 (403)
Q Consensus 226 ~~L~~~l~-~~Gl~~p~~~~~~~TvGG~ia~n~~G~~s~~yG~~~D~V~~levV~~d--G~iv~~~~~~~~~~~g~dL~~ 302 (403)
.+|+++|. ++|+.+|.+.+..++|||++.++++|+++++||.++|+|+++|||++| |+++.......+...++||||
T Consensus 130 ~~l~~~l~~~~Gl~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV~~d~~G~i~~~~~~~~~~~~~~DLf~ 209 (521)
T 2ipi_A 130 GETYRALYLDWGVTIPAGVCPQVGVGGHVLGGGYGPLSRRDGVVADHLYAVEVVVVDASGRARKVVATSAADDPNRELWW 209 (521)
T ss_dssp HHHHHHHHHHHSBCCCCCSCTTCBHHHHTTTTCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEECCTTCTTHHHHH
T ss_pred HHHHHHHHHhcCceeCCCCCCCcccCCcccCCCCCccccccccHhhcEEEEEEEEecCCccEEEEecccccCCCCHHHHH
Confidence 99999997 799999998888899999999999999999999999999999999977 997554322212333567999
Q ss_pred hhhcc-CCceeEEEEEEEEe-----------EecCCc-cEEEEEeC
Q 015664 303 LIIGS-EGTLGIITEVTLRL-----------QKIPQH-SVVATCNF 335 (403)
Q Consensus 303 ~~~Gs-~GtlGIIT~~tLkl-----------~p~p~~-~~~~~~~f 335 (403)
+++|+ +|+|||||+++||+ +|.|+. .....+.|
T Consensus 210 a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~ 255 (521)
T 2ipi_A 210 AHTGGGGGNFGIVTRYWFRTPGATGTDPSQLLPKAPTSTLRHIVTW 255 (521)
T ss_dssp HTTTSCSSSSCEEEEEEECCSSCCSSCGGGSSCBCCSCEEEEEEEE
T ss_pred HHhcCCCCceEEEEEEEEEeecccCCCcccccCCCCceEEEEEEEe
Confidence 99985 79999999999999 998764 33334444
No 18
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=3.9e-33 Score=290.21 Aligned_cols=212 Identities=18% Similarity=0.254 Sum_probs=171.6
Q ss_pred HHhcCCCeeeChhhhhhcc-CCCCCcCcCCCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCcccccCCCcEE
Q 015664 120 KAICQDDMTMDYEERYIHG-KPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVC 198 (403)
Q Consensus 120 ~~~lg~~v~~~~~~~~~~~-~~~~s~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~~~~~~~gvv 198 (403)
...+...+++..+..+... ..++ .+....|.+||+|++++||+++|++|+++++|++++||||++.|.+...++|++
T Consensus 5 ~~s~~~~~~~p~~~~y~~~~~~~n--~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~~gvv 82 (501)
T 3pop_A 5 TASVPPFTVGREDPRYIELSHSDN--HRFVVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTPRRDLV 82 (501)
T ss_dssp ----CCEEEETTSTTHHHHTCCSC--TTSCCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSSCCSEE
T ss_pred cccCCCceECCCCcchHHHHHHHh--hccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccCCCEEE
Confidence 3444555666544443221 2222 244579999999999999999999999999999999999999988876678999
Q ss_pred EEcCCCCCcEEeeecCcEEEEccCCCHHHHHHHHh-cCCCeecCCCCccccccccccccccCCCccccccccceEEEEEE
Q 015664 199 IDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLE-PYGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKV 277 (403)
Q Consensus 199 Idl~~mn~i~~id~~~~~v~VeaGv~~~~L~~~l~-~~Gl~~p~~~~~~~TvGG~ia~n~~G~~s~~yG~~~D~V~~lev 277 (403)
|||++||+| ++|+++.+++||||++|.+|+++|. ++|+.+|.+.+..++|||.+.++++|..+++||.++|+|+++||
T Consensus 83 Idl~~l~~i-~vd~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~~ev 161 (501)
T 3pop_A 83 LDLHNLHAI-GPAADGAGVRVGSGATVDQVQKALFRRWNAALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVDHLHAVEV 161 (501)
T ss_dssp EECTTCCCE-EECTTSSSEEEETTCBHHHHHHHHHHHHSBCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGEEEEEE
T ss_pred EEecccCCe-EEcCCCCEEEEECCcCHHHHHHHHHhhcCeEeCCCCCCCceEeeccccCCCcccccccccHHHhEEEEEE
Confidence 999999998 6999999999999999999999996 57999998888888899999999999999999999999999999
Q ss_pred Ee--CCCe--EEEcccccccccccccchhhhhcc-CCceeEEEEEEEEe----------EecCC-ccEEEEEeCC
Q 015664 278 VL--ANGD--VVKTASRARKSAAGYDLTRLIIGS-EGTLGIITEVTLRL----------QKIPQ-HSVVATCNFP 336 (403)
Q Consensus 278 V~--~dG~--iv~~~~~~~~~~~g~dL~~~~~Gs-~GtlGIIT~~tLkl----------~p~p~-~~~~~~~~f~ 336 (403)
|+ +||+ +++...+ ....++||||+++|+ +|+|||||+++||+ +|.++ ......+.|+
T Consensus 162 V~~da~G~~~~v~~~~~--~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~ 234 (501)
T 3pop_A 162 AVVDESRTVRLVTARAD--DTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFP 234 (501)
T ss_dssp EEECTTSCEEEEEEETT--CCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEE
T ss_pred EEecCCCCEEEEEeccC--CCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEc
Confidence 99 8999 4544211 123478999999998 79999999999999 66544 3444445553
No 19
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=100.00 E-value=2.2e-35 Score=291.71 Aligned_cols=260 Identities=15% Similarity=0.225 Sum_probs=191.0
Q ss_pred CCCcHHHHHHHHHhcCC-CeeeChhhhhhccCCCCCcCcCCCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCC
Q 015664 109 KEIPQELVDELKAICQD-DMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIE 187 (403)
Q Consensus 109 ~~~~~~~~~~L~~~lg~-~v~~~~~~~~~~~~~~~s~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~ 187 (403)
..++.+++++|++++++ ++.+ +.....|. ++ ++++.|++|++|+|++||++++++|+++++|++++|||||+.
T Consensus 12 ~~~~~~~~~~l~~~l~~~~v~~-~~~l~~~~----t~-~~~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~ 85 (326)
T 1hsk_A 12 DPINKDIYQALQQLIPNEKIKV-DEPLKRYT----YT-KTGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNII 85 (326)
T ss_dssp ---CHHHHHHHHHHSCGGGEEE-EEEGGGTC----TT-SCCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEE
T ss_pred CcchHHHHHHHHHhcCccceec-CcchHHhc----cC-CcCCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccc
Confidence 35788999999999995 6766 44444343 22 456789999999999999999999999999999999999998
Q ss_pred cccccCCCcEEEEcCCCCCcEEeeecCcEEEEccCCCHHHHHHHHhcCCCe-ecCCCCccccccccccccccCCCccccc
Q 015664 188 GHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLF-FPLDPGPGATIGGMCATRCSGSLAVRYG 266 (403)
Q Consensus 188 g~~~~~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~~~L~~~l~~~Gl~-~p~~~~~~~TvGG~ia~n~~G~~s~~yG 266 (403)
++..+. +|++|||++||+| ++| +.+++||||++|.+|++++.++|+. ++..++.++||||++++|++| ||
T Consensus 86 ~~~~~~-~gvvI~l~~m~~i-~id--~~~v~v~aGv~~~~l~~~l~~~Gl~gLe~~~~~PgtvGG~i~~nagg-----yG 156 (326)
T 1hsk_A 86 IREGGI-RGIVISLLSLDHI-EVS--DDAIIAGSGAAIIDVSRVARDYALTGLEFACGIPGSIGGAVYMNAGA-----YG 156 (326)
T ss_dssp ECTTCE-EEEEEECTTCCCE-EEE--TTEEEEETTSBHHHHHHHHHHTTEESCGGGTTCCSBHHHHHHHTCEE-----TT
T ss_pred cCCCCC-CeEEEEeCCCCce-EEc--CCEEEEeCCCcHHHHHHHHHHCCCccccccCCCcchhhHHHhccccc-----Cc
Confidence 765543 5899999999999 776 4789999999999999999999993 333344456999999999765 99
Q ss_pred -cccceEEEEEEEeCCCeEEEcccccccccccccchhhhhccCCceeEEEEEEEEeEec-CCccEEEEEeCCCHHHHHHH
Q 015664 267 -TMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKI-PQHSVVATCNFPTIKDAADV 344 (403)
Q Consensus 267 -~~~D~V~~levV~~dG~iv~~~~~~~~~~~g~dL~~~~~Gs~GtlGIIT~~tLkl~p~-p~~~~~~~~~f~~~~~a~~~ 344 (403)
.++|+|+++++|++||++++++.. ++..||++..+. ++| ||||+++||++|. |+.....+..|.+..++.+.
T Consensus 157 ~~~~d~v~~v~vv~~~G~i~~~~~~--~~~~gyr~~~l~--s~g--gIIt~~~l~l~p~~p~~~~~~~~~~~~~~~a~~p 230 (326)
T 1hsk_A 157 GEVKDCIDYALCVNEQGSLIKLTTK--ELELDYRNSIIQ--KEH--LVVLEAAFTLAPGKMTEIQAKMDDLTERRESKQP 230 (326)
T ss_dssp EEHHHHEEEEEEECTTSCEEEEETT--TTTCBTTBCHHH--HTT--CEEEEEEEECEECCHHHHHHHHHHHHHHHHHHSC
T ss_pred hhhhhhEEEEEEEeCCCCEEEEChH--HcCCCccccccC--CCC--EEEEEEEEEEEcCCHHHHHHHHHHHHHHHHhcCC
Confidence 899999999999999999988664 566788876654 456 9999999999998 54433333333333333221
Q ss_pred HH-----HHHHcCCCceEEEecCHHHHHHHHHhhCCCCCC-CCceEEEEcCC
Q 015664 345 AI-----ATMLSGIQVSRVELLDEVQVRAVNIANGKNLPE-LPTLMFEFIGT 390 (403)
Q Consensus 345 ~~-----~i~~~~~~~~~~e~~D~~~~~~~~~~~~~~~p~-~~~l~~e~~g~ 390 (403)
+. .+++++..+.+.|+||+..++.... .+..+++ .+.++++++|.
T Consensus 231 ~~~~s~gs~fk~p~~~~a~elid~~glkg~~~-g~a~v~~~~a~~lvn~~ga 281 (326)
T 1hsk_A 231 LEYPSCGSVFQRPPGHFAGKLIQDSNLQGHRI-GGVEVSTKHAGFMVNVDNG 281 (326)
T ss_dssp TTSCEECCCBCCCTTSCHHHHHHHTTCTTCEE-TTEEECSSCTTCEEECSSC
T ss_pred CCCCcEEEeeeCCCcchHHHHHHHhccCCEEe-CCeeecccccEEEEECCCC
Confidence 11 2233444456667766654432221 1112233 35799999984
No 20
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=2.9e-32 Score=285.51 Aligned_cols=189 Identities=21% Similarity=0.280 Sum_probs=161.5
Q ss_pred cCCCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCcccccCCCcEEEEcCCCCCcEEeeecCcEEEEccCCCH
Q 015664 146 KAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGW 225 (403)
Q Consensus 146 ~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~~~~~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~ 225 (403)
+....|.+||+|++++||+++|++|+++++||.++||||++.|.+...++|++|||++||+| ++|+++.+|+||||++|
T Consensus 54 ~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~gvvIdl~~l~~i-~~d~~~~~v~v~aG~~~ 132 (530)
T 2y3s_A 54 RFVGDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVANSDVRVVMDMSRLSAV-GFDEERGAFAVEAGATL 132 (530)
T ss_dssp TCCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTCTTCCEEEECTTCCCE-EEETTTTEEEEETTCBH
T ss_pred hccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccCCCeEEEEcccCCCE-EEcCCCCEEEEeCCCCH
Confidence 44679999999999999999999999999999999999999887765567999999999999 79999999999999999
Q ss_pred HHHHHHHhc-CCCeecCCCCccccccccccccccCCCccccccccceEEEEEEEe--CCCeEEEcccccccccccccchh
Q 015664 226 MELNEYLEP-YGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVL--ANGDVVKTASRARKSAAGYDLTR 302 (403)
Q Consensus 226 ~~L~~~l~~-~Gl~~p~~~~~~~TvGG~ia~n~~G~~s~~yG~~~D~V~~levV~--~dG~iv~~~~~~~~~~~g~dL~~ 302 (403)
.+|+++|.+ +|+.++.+.+..+++||+++++++|+++++||.++|+|+++|||+ ++|+++...........++||||
T Consensus 133 ~~l~~~l~~~~Gl~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV~~d~~G~i~~v~~~~~~~~~d~DLf~ 212 (530)
T 2y3s_A 133 GAVYKTLFRVWGVTLPGGACPDVGAGGHILGGGYGPLSRMHGSIVDYLHAVEVVVVDASGDARTVIATREPSDPNHDLWW 212 (530)
T ss_dssp HHHHHHHHHHHSCCCCCCSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHH
T ss_pred HHHHHHHHhhcCeEEeCCCCCCCCcCCCcCCCCCCcccccccchhhheeeEEEEEecCCCcEEEEeccccccCCChHHHH
Confidence 999999985 899998877777899999999999999999999999999999999 55998543211100112245999
Q ss_pred hhhcc-CCceeEEEEEEEEe------------EecCC-ccEEEEEeC
Q 015664 303 LIIGS-EGTLGIITEVTLRL------------QKIPQ-HSVVATCNF 335 (403)
Q Consensus 303 ~~~Gs-~GtlGIIT~~tLkl------------~p~p~-~~~~~~~~f 335 (403)
+++|+ +|+|||||+++||+ +|.|+ ......+.|
T Consensus 213 a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~ 259 (530)
T 2y3s_A 213 AHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVW 259 (530)
T ss_dssp HTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEE
T ss_pred HHhcCCCCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEe
Confidence 99986 69999999999999 88875 344444444
No 21
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=100.00 E-value=9.6e-33 Score=281.70 Aligned_cols=202 Identities=22% Similarity=0.235 Sum_probs=176.4
Q ss_pred CCCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCcccccCCCcEEEEcCCCCCcEEeeecCcEEEEccCCCHH
Q 015664 147 AVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWM 226 (403)
Q Consensus 147 ~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~~~~~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~~ 226 (403)
....|.+|++|+|++||++++++| +|+.++|+|||+.+.+.+..+|++|||++||+|+++|+++.+++||||++|.
T Consensus 17 ~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~~~~~g~vi~l~~l~~i~~~d~~~~~v~v~aG~~l~ 92 (422)
T 2vfr_A 17 ITYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAEPGDGGVLLSLAGLPSVVDVDTAARTVRVGGGVRYA 92 (422)
T ss_dssp CBCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTCCCTTCEEECSTTSCCCEEEETTTTEEEEETTCBHH
T ss_pred ccCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCccCCCCcEEEEhhhCCCcEEEcCCCCEEEEcCCCCHH
Confidence 446899999999999999999999 8999999999999888754579999999999998899999999999999999
Q ss_pred HHHHHHhcCCCeecCCCCcc-ccccccccccccCCCccccccccceEEEEEEEeCCCeEEEcccccccccccccchhhhh
Q 015664 227 ELNEYLEPYGLFFPLDPGPG-ATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLII 305 (403)
Q Consensus 227 ~L~~~l~~~Gl~~p~~~~~~-~TvGG~ia~n~~G~~s~~yG~~~D~V~~levV~~dG~iv~~~~~~~~~~~g~dL~~~~~ 305 (403)
+|+++|.++|+.+|..++.+ +||||++++|++|.. .+||.++|+|+++|+|++||++++++.. ++ . |++++
T Consensus 93 ~l~~~l~~~Gl~l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~--~~----~-f~~~~ 164 (422)
T 2vfr_A 93 ELARVVHARGLALPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARG--DE----R-FGGAV 164 (422)
T ss_dssp HHHHHHHHTTEECSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETT--ST----T-GGGTS
T ss_pred HHHHHHHHcCCcccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCC--CC----C-cceEE
Confidence 99999999999998655554 799999999999986 6999999999999999999999988754 22 2 79999
Q ss_pred ccCCceeEEEEEEEEeEecCCccEEEEEeCCCHHHHH-HHHHHHHHcCCCceEEEecCHHH
Q 015664 306 GSEGTLGIITEVTLRLQKIPQHSVVATCNFPTIKDAA-DVAIATMLSGIQVSRVELLDEVQ 365 (403)
Q Consensus 306 Gs~GtlGIIT~~tLkl~p~p~~~~~~~~~f~~~~~a~-~~~~~i~~~~~~~~~~e~~D~~~ 365 (403)
|++|+|||||+++||+.|.|+....... |.+++++. +.+.++.. .+..+|++| ..
T Consensus 165 g~~G~lGvit~~~l~l~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~e~~~-~~ 220 (422)
T 2vfr_A 165 TSLGALGVVTSLTLDLEPAYEMEQHVFT-ELPLAGLDPATFETVMA---AAYSVSLFT-DW 220 (422)
T ss_dssp SCTTTTCEEEEEEEECEECCEEEEEEEE-EECSTTCCHHHHHHHHT---SSSEEEEEE-CS
T ss_pred ecCCCCEEEEEEEEEEEecCceEEEEEe-cCCHHHHHHHHHHHHHh---cCCcEEEEe-cC
Confidence 9999999999999999999986655543 67888888 77776653 577888887 44
No 22
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.96 E-value=1.4e-29 Score=263.85 Aligned_cols=187 Identities=21% Similarity=0.244 Sum_probs=156.5
Q ss_pred cCCCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCC-----cccccCCCcEEEEcC-CCCCcEEeeec--CcEE
Q 015664 146 KAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIE-----GHTLSPNGGVCIDLS-LMKSVKALHIE--DMDV 217 (403)
Q Consensus 146 ~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~-----g~~~~~~~gvvIdl~-~mn~i~~id~~--~~~v 217 (403)
.+...|.+|++|+|++||+++|++|+++++|++++|+|||+. ++. +.++||+|||+ +||+| ++|++ ..+|
T Consensus 25 ~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~-~~~~GVvIdls~~Ln~I-~vD~~~~~~tV 102 (540)
T 3js8_A 25 DIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGV-SCPAVVLLDTTRYLTAM-SIDASGPVAKV 102 (540)
T ss_dssp CCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTC-SSCSEEEEETTTTCCCE-EEECSSSSEEE
T ss_pred ccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCC-CCCCeEEEECcCcCCCE-EECCCCCccEE
Confidence 345789999999999999999999999999999999999996 444 44678999995 79999 89975 5899
Q ss_pred EEccCCCHHHHHHHHhcCCCeecCCCCcc-ccccccccccccCCC----------ccccccccceEEEEEEEeCCCe---
Q 015664 218 VVEPGIGWMELNEYLEPYGLFFPLDPGPG-ATIGGMCATRCSGSL----------AVRYGTMRDNVINLKVVLANGD--- 283 (403)
Q Consensus 218 ~VeaGv~~~~L~~~l~~~Gl~~p~~~~~~-~TvGG~ia~n~~G~~----------s~~yG~~~D~V~~levV~~dG~--- 283 (403)
+||||+++.+|+++|.++|+.++++++++ +||||++++|+||.. +.+||.++|+|++++||++||+
T Consensus 103 tV~AGv~l~~L~~~L~~~GL~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~~D~V~~levV~adG~~~~ 182 (540)
T 3js8_A 103 TAQAGITMEALLTGLEKAGLGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISNLVLSLTAVVYDKASGA 182 (540)
T ss_dssp EEETTSBHHHHHHHHHHTTEECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGGGEEEEEEEEEETTTTE
T ss_pred EEccCCCHHHHHHHHHHcCCEEEecCCCCCeEEcccccCCCCcccccccccccccccccccHHHhEEEEEEEcCCCCCce
Confidence 99999999999999999999999887764 999999999999985 5799999999999999999998
Q ss_pred --EEEcccccccccccccchhhhhccCCceeEEEEEEEEeEecCCccEEEEEeCCCHHHHHH
Q 015664 284 --VVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTIKDAAD 343 (403)
Q Consensus 284 --iv~~~~~~~~~~~g~dL~~~~~Gs~GtlGIIT~~tLkl~p~p~~~~~~~~~f~~~~~a~~ 343 (403)
++++.. .++||++++.| .|+ ||||+++||++|.+........ .-++++.++
T Consensus 183 ~~i~~~s~------~~~DL~a~r~G-~G~-gIVTevtlrl~P~~~l~~~~~~-~~~~~e~l~ 235 (540)
T 3js8_A 183 YALRKFAR------NDPQIAPLLAH-VGR-SLIVEATLQAAPNQRLRCQSWF-NIPYGEMFA 235 (540)
T ss_dssp EEEEEEET------TSGGGHHHHTC-TTS-SCEEEEEEEEEECCEEEEEEEC-CSCHHHHTC
T ss_pred eeEEEeCC------CChhHHHHHhc-CCC-eEEEEEEEEEEECCceEEEEEe-cCCHHHHHh
Confidence 665542 26898666555 477 5999999999998765433221 135666654
No 23
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.96 E-value=2.7e-29 Score=264.70 Aligned_cols=188 Identities=18% Similarity=0.274 Sum_probs=160.9
Q ss_pred cCCCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCcccccC----CCcEEEEc-CCCCCcEEeee--cCcEEE
Q 015664 146 KAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSP----NGGVCIDL-SLMKSVKALHI--EDMDVV 218 (403)
Q Consensus 146 ~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~~~~~----~~gvvIdl-~~mn~i~~id~--~~~~v~ 218 (403)
++...|.+|++|+|++||+++|++|+++++|++++|+|||+.+.++.. .+|++||| ++||+| ++|+ ++.+|+
T Consensus 31 ~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~~~gvvIdl~~~l~~i-~vd~~~~~~~v~ 109 (561)
T 2i0k_A 31 EIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANVEKVILADTMTHLNGI-TVNTGGPVATVT 109 (561)
T ss_dssp SSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCCTTEEEEECTTTSCCE-EEECCSSSCEEE
T ss_pred ccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcCCCeEEEechhhCCce-EecCcCCccEEE
Confidence 345789999999999999999999999999999999999986544322 35899999 899999 8998 789999
Q ss_pred EccCCCHHHHHHHHhcCCCeecCCCCcc-ccccccccccccCCC----------ccccccccceEEEEEEEeCCCe---E
Q 015664 219 VEPGIGWMELNEYLEPYGLFFPLDPGPG-ATIGGMCATRCSGSL----------AVRYGTMRDNVINLKVVLANGD---V 284 (403)
Q Consensus 219 VeaGv~~~~L~~~l~~~Gl~~p~~~~~~-~TvGG~ia~n~~G~~----------s~~yG~~~D~V~~levV~~dG~---i 284 (403)
||||++|.+|+++|.++|+.+|+.++++ +||||++++|+||.. +.+||.++|+|+++|+|++||+ +
T Consensus 110 v~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~TvGG~i~~~~~G~~l~~gG~~~~s~~~~G~~~d~V~~~evV~~dG~~~~~ 189 (561)
T 2i0k_A 110 AGAGASIEAIVTELQKHDLGWANLPAPGVLSIGGALAVNAHGAALPAVGQTTLPGHTYGSLSNLVTELTAVVWNGTTYAL 189 (561)
T ss_dssp EETTSBHHHHHHHHHHTTEECSSCCSCTTCBHHHHHHTTCCCSCCCCTTCCCCTTCCSSCGGGGEEEEEEEEECSSSEEE
T ss_pred EcCCCCHHHHHHHHHHcCCcccccCCCCCcccCCCcccCCcccccccCCcccccccccccHhheEEEEEEEeCCCCEEEe
Confidence 9999999999999999999999998876 999999999999986 7789999999999999999999 6
Q ss_pred EEcccccccccccccchhhhhccCCceeEEEEEEEEeEecCCccEEEEEeCCCHHHHHH
Q 015664 285 VKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTIKDAAD 343 (403)
Q Consensus 285 v~~~~~~~~~~~g~dL~~~~~Gs~GtlGIIT~~tLkl~p~p~~~~~~~~~f~~~~~a~~ 343 (403)
+++... +.||+++++|. |. ||||+++||+.|.|+........++ .+++++
T Consensus 190 ~~~~~~------~~dl~~a~~g~-G~-giIt~~tl~l~p~~~~~~~~~~~~~-~~~~l~ 239 (561)
T 2i0k_A 190 ETYQRN------DPRITPLLTNL-GR-CFLTSVTMQAGPNFRQRCQSYTDIP-WRELFA 239 (561)
T ss_dssp EEEETT------SGGGHHHHSCT-TS-SCEEEEEEECEECCEEEEEEECCSC-HHHHTC
T ss_pred eeccCC------CccHHHHHhcC-CC-EEEEEEEEEEEECCceEEEEEEccC-HHHHHH
Confidence 655432 46898888844 55 8999999999999876665555455 555544
No 24
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.96 E-value=2.4e-29 Score=247.77 Aligned_cols=196 Identities=17% Similarity=0.285 Sum_probs=155.1
Q ss_pred CCcHHHHHHHHHhcCC-CeeeChhhhhhccCCCCCcCcCCCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCc
Q 015664 110 EIPQELVDELKAICQD-DMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEG 188 (403)
Q Consensus 110 ~~~~~~~~~L~~~lg~-~v~~~~~~~~~~~~~~~s~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g 188 (403)
.|+++++++|++++++ ++..+ .....|. ++ ++++.|++|++|+|++||++++++|+++++|++++|+|||+.+
T Consensus 19 ~~~~~~~~~L~~~lg~~~v~~~-~~l~~~t----t~-~igg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~ 92 (322)
T 3tx1_A 19 YFQSNAMNNLQTKFPHIAIKLN-EPLSKYT----YT-KTGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLII 92 (322)
T ss_dssp ------CCCHHHHCTTSEEEEE-EEGGGGS----TT-SCCCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEE
T ss_pred ccCHHHHHHHHHhcCCcceEcC-cchHHhc----cC-CcCceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCc
Confidence 3667789999999986 56666 3343342 33 6778999999999999999999999999999999999999964
Q ss_pred ccccCCCcEEEEcCCCCCcEEeeecCcEEEEccCCCHHHHHHHHhcCCCe-ecCCCCccccccccccccccCCCcccc-c
Q 015664 189 HTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLF-FPLDPGPGATIGGMCATRCSGSLAVRY-G 266 (403)
Q Consensus 189 ~~~~~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~~~L~~~l~~~Gl~-~p~~~~~~~TvGG~ia~n~~G~~s~~y-G 266 (403)
.... .+|++|||++|++|. +| +.+++|+||++|.+|++++.++|+. +++.+++++||||++++|++| | |
T Consensus 93 ~~~~-~~gvvI~l~~~~~I~-~d--~~~v~v~aG~~~~~l~~~l~~~Gl~Gle~~~giPgTVGGav~~NaGg-----yGg 163 (322)
T 3tx1_A 93 KDGG-IRGVILHLDLLQTIE-RN--NTQIVAMSGAKLIDTAKFALNESLSGLEFACGIPGSIGGALHMNAGA-----YGG 163 (322)
T ss_dssp CTTC-EEEEEEECTTCCCEE-EE--TTEEEEETTSBHHHHHHHHHHTTEESCGGGTTCCSBHHHHHHHTCEE-----TTE
T ss_pred CCCC-CCeEEEECCCCCcEE-EC--CCEEEEecCcCHHHHHHHHHHcCCcccccCCCCcchhHHHHHhCccC-----ccc
Confidence 4322 258999999999985 54 5699999999999999999999997 666677789999999999654 7 5
Q ss_pred cccceEEEEEEEeCCCeEEEcccccccccccccchhhhhccCCceeEEEEEEEEeEecCC
Q 015664 267 TMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQ 326 (403)
Q Consensus 267 ~~~D~V~~levV~~dG~iv~~~~~~~~~~~g~dL~~~~~Gs~GtlGIIT~~tLkl~p~p~ 326 (403)
.++|+|+++++|++||+++++... ..+|++...+.|+++ ||||+++|||.|.|+
T Consensus 164 ~~~d~v~~vevV~~~G~i~~~~~~----~~~~~yR~s~~g~~~--~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 164 EISDVLEAATVLTQTGELKKLKRS----ELKAAYRFSTIAEKN--YIVLDATFSLALEEK 217 (322)
T ss_dssp EHHHHEEEEEEECTTSCEEEEEGG----GCC--CC-CTTTGGG--CEEEEEEEECEECCH
T ss_pred chHhhEEEEEEEcCCCCEEEechH----HcCcchhhcccCCCC--EEEEEEEEEEEeCCH
Confidence 799999999999999999987542 234555555555544 799999999999875
No 25
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.95 E-value=9.8e-27 Score=230.82 Aligned_cols=198 Identities=17% Similarity=0.141 Sum_probs=160.4
Q ss_pred CCcCcCCCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCcccccCCCcEEEEcCCCCCcEEeeecC-cEEEEc
Q 015664 142 NSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIED-MDVVVE 220 (403)
Q Consensus 142 ~s~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~~~~~~~gvvIdl~~mn~i~~id~~~-~~v~Ve 220 (403)
++| ++++.|+++++|+|++||++++++|+++++|++++|+|||+.+..- .+|++|+++ |++|..++.++ .+++|+
T Consensus 7 tt~-~igg~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d~--~~GvVI~l~-~~~i~~i~~~~~~~v~vg 82 (340)
T 1uxy_A 7 NTF-GIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED--YRGTVIINR-IKGIEIHDEPDAWYLHVG 82 (340)
T ss_dssp STT-CCCCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSC--EEEEEEEEC-CCCEEEEECSSEEEEEEE
T ss_pred ccC-CCCccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccCC--CCeEEEEcc-CCCcEEEecCCCeEEEEe
Confidence 444 7889999999999999999999999999999999999999865432 258999996 99998777777 689999
Q ss_pred cCCCHHHHHHHHhcCCCe-ecCCCCccccccccccccccCCCcccccc-ccceEEEEEEEeC-CCeEEEccccccccccc
Q 015664 221 PGIGWMELNEYLEPYGLF-FPLDPGPGATIGGMCATRCSGSLAVRYGT-MRDNVINLKVVLA-NGDVVKTASRARKSAAG 297 (403)
Q Consensus 221 aGv~~~~L~~~l~~~Gl~-~p~~~~~~~TvGG~ia~n~~G~~s~~yG~-~~D~V~~levV~~-dG~iv~~~~~~~~~~~g 297 (403)
||++|.+|.+++.++|+. +++..++++||||++.+| ++.||. ++|+|.++++|++ ||+++++... ++.++
T Consensus 83 AG~~~~~l~~~~~~~Gl~Gle~~~gIPGtVGGa~~~N-----aGayG~ei~d~v~~v~vv~~~~G~v~~~~~~--d~~~g 155 (340)
T 1uxy_A 83 AGENWHRLVKYTLQEGMPGLENLALIPGCVGSSPIQN-----IGAYGVELQRVCAYVDSVELATGKQVRLTAK--ECRFG 155 (340)
T ss_dssp TTSBHHHHHHHHHHTTCCSCGGGTTCCSBGGGTTTTT-----CEETTEEGGGTEEEEEEEETTTTEEEEEETG--GGTCB
T ss_pred cCCCHHHHHHHHHHCCCCccccccCCccchhHHHHhc-----cccchhhHHhheeEEEEEECCCCcEEEEeHH--Hhccc
Confidence 999999999999999996 888888899999999999 566996 9999999999997 9999988653 44556
Q ss_pred ccchhhhhccCCceeEEEEEEEEeEecCCccEEEE-E-----eCCCHHHHHHHHHHHHHc
Q 015664 298 YDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVAT-C-----NFPTIKDAADVAIATMLS 351 (403)
Q Consensus 298 ~dL~~~~~Gs~GtlGIIT~~tLkl~p~p~~~~~~~-~-----~f~~~~~a~~~~~~i~~~ 351 (403)
|+.. .+.++++++||||+++|||.|.+...+.+. + ..++.++..+.+.++++.
T Consensus 156 YR~s-~~~~~~~~~gIVt~v~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~ 214 (340)
T 1uxy_A 156 YRDS-IFKHEYQDRFAIVAVGLRLPKEWQPVLTYGDLTRLDPTTVTPQQVFNAVCHMRTT 214 (340)
T ss_dssp TTBC-GGGTTTTTTEEEEEEEEEEESSCCCCCCSGGGGGSCTTTCCHHHHHHHHHHHHHH
T ss_pred cCcC-ccCCcCCCCEEEEEEEEEEEcCCCccCCHHHHhhhccccccHHHHHHHHHHHHHh
Confidence 6653 334456689999999999999864321100 0 123567777777776654
No 26
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.95 E-value=4.6e-27 Score=234.18 Aligned_cols=198 Identities=15% Similarity=0.139 Sum_probs=159.3
Q ss_pred CCcCcCCCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCcccccCCCcEEEEcCCCCCcEEeee--cCcEEEE
Q 015664 142 NSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHI--EDMDVVV 219 (403)
Q Consensus 142 ~s~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~~~~~~~gvvIdl~~mn~i~~id~--~~~~v~V 219 (403)
++| ++++.|+++++|+|++||++++++|+++++|++++|+|||+.+... .+|++|+++ |++| +++. ++.+++|
T Consensus 23 tt~-~igg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~--~~GvVI~l~-~~~i-~v~~~~~~~~v~v 97 (357)
T 3i99_A 23 HTF-GIEQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH--YTGMIVVNR-LNGI-EHQQDDDYHRLHV 97 (357)
T ss_dssp STT-CCSCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC--EEEEEEEEC-CCCE-EEEECSSEEEEEE
T ss_pred ccC-CCCccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC--CCeEEEEcC-CCce-EEeccCCceEEEE
Confidence 344 7889999999999999999999999999999999999999865443 258999998 9998 4553 4568999
Q ss_pred ccCCCHHHHHHHHhcCCCe-ecCCCCccccccccccccccCCCcccccc-ccceEEEEEEEeC-CCeEEEcccccccccc
Q 015664 220 EPGIGWMELNEYLEPYGLF-FPLDPGPGATIGGMCATRCSGSLAVRYGT-MRDNVINLKVVLA-NGDVVKTASRARKSAA 296 (403)
Q Consensus 220 eaGv~~~~L~~~l~~~Gl~-~p~~~~~~~TvGG~ia~n~~G~~s~~yG~-~~D~V~~levV~~-dG~iv~~~~~~~~~~~ 296 (403)
+||++|.+|.+++.++||. +++..++++||||++++| ++.||. ++|+|.++++|++ ||++++.... ++.+
T Consensus 98 ~AG~~~~~l~~~a~~~Gl~GlE~l~gIPGtVGGav~~N-----aGaYG~e~~d~v~~vevv~~~~G~i~~~~~~--dl~f 170 (357)
T 3i99_A 98 AGGEDWPSLVSWCVEQGIGGLENLALIPGCAGSAPIQN-----IGAYGVEFKDVCDYVEYLCLETGTVKRLTME--ECQF 170 (357)
T ss_dssp ETTSBHHHHHHHHHHTTCTTCGGGTTCCSBGGGTTTTT-----CEETTEEGGGTEEEEEEEETTTTEEEEEETG--GGCC
T ss_pred eCCCcHHHHHHHHHHcCCcCccccCCCCchhHHHHHhc-----hhhhhhhHHhhEeEEEEEECCCCcEEEEeHH--HcCc
Confidence 9999999999999999998 888888899999999999 568997 9999999999998 9999987653 3444
Q ss_pred cccchhhhhccCCceeEEEEEEEEeEecCCccEEE-----EEeCCCHHHHHHHHHHHHHcC
Q 015664 297 GYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVA-----TCNFPTIKDAADVAIATMLSG 352 (403)
Q Consensus 297 g~dL~~~~~Gs~GtlGIIT~~tLkl~p~p~~~~~~-----~~~f~~~~~a~~~~~~i~~~~ 352 (403)
+|+... +.+++|++||||+++|||.|.++....+ .+..++.++..+.+.++++..
T Consensus 171 ~YR~s~-~~~~~g~~gIIt~v~f~L~p~~~~~~~y~~l~~~l~~~~~~~~~~~v~~~R~~k 230 (357)
T 3i99_A 171 GYRDSI-FKHQLYQKAVVTAVGLKFAKAWQPIIQYGPLKDLSSDCAIHDVYQRVCATRMEK 230 (357)
T ss_dssp BTTBCG-GGTTTTTTEEEEEEEEEEESSCCCCCCSGGGGGSCTTCCHHHHHHHHHHHHHHH
T ss_pred cccccc-CCCccCCCEEEEEEEEEEEeCCccccchHHHHhhhccCCHHHHHHHHHHHHhcC
Confidence 555422 3344579999999999999986432110 002355667777777766554
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.92 E-value=2.4e-25 Score=213.93 Aligned_cols=174 Identities=17% Similarity=0.133 Sum_probs=141.1
Q ss_pred CCcCcCCCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCcccccCCCcEEEEcCCCCCcEEeeecCcEEEEcc
Q 015664 142 NSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEP 221 (403)
Q Consensus 142 ~s~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~~~~~~~gvvIdl~~mn~i~~id~~~~~v~Vea 221 (403)
++| ++++.|+ +++|+|++||++++ ++|++++|+|||+.+...+.++|++|++++|++|. +| + +|+|
T Consensus 15 tt~-~igg~a~-vv~p~s~edv~~~v------~ipv~v~GgGsnll~~d~~~~~GvVI~l~~~~~I~-vd--~---~v~a 80 (268)
T 2gqt_A 15 TTL-GVGGPAE-LWTVETREELKRAT------EAPYRVLGNGSNLLVLDEGVPERVIRLAGEFQTYD-LK--G---WVGA 80 (268)
T ss_dssp SSS-CCCCEEE-EEEECSHHHHHHHT------TSCEEECSSSSSEEECTTCCSSEEEEECGGGGCBC-TT--S---EEET
T ss_pred ccc-ccCcceE-EEEeCCHHHHHHHh------CCCeEEcCCCcCceecCCCcCCeEEEEcCCCCCcE-Ec--C---EEEC
Confidence 444 7778899 99999999999999 89999999999997665555559999999999984 54 2 9999
Q ss_pred CCCHHHHHHHHhcCCCe-ecCCCCccccccccccccccCCCccccc-cccceEEEEEEEeCCCeEEEccccccccccccc
Q 015664 222 GIGWMELNEYLEPYGLF-FPLDPGPGATIGGMCATRCSGSLAVRYG-TMRDNVINLKVVLANGDVVKTASRARKSAAGYD 299 (403)
Q Consensus 222 Gv~~~~L~~~l~~~Gl~-~p~~~~~~~TvGG~ia~n~~G~~s~~yG-~~~D~V~~levV~~dG~iv~~~~~~~~~~~g~d 299 (403)
|++|.+|.+++.++||. +++..++++||||++++| ++.|| .++|+|+++++| +||+++++... ++.++|+
T Consensus 81 G~~~~~l~~~~~~~Gl~Gle~~~giPGtvGGav~~N-----aGayG~e~~d~v~~v~vv-~~G~v~~~~~~--~l~~~YR 152 (268)
T 2gqt_A 81 GTLLPLLVQEAARAGLSGLEGLLGIPAQVGGAVKMN-----AGTRFGEMADALEAVEVF-HDGAFHVYCPE--ELGFGYR 152 (268)
T ss_dssp TSBHHHHHHHHHHTTEESCGGGTTCCCBHHHHHHTT-----CEETTEEGGGGEEEEEEE-ETTEEEEECGG--GSCCBTT
T ss_pred CCCHHHHHHHHHHcCCcCCccccCccchhHHHHHhc-----cccCchhHHhheeEEEEE-CCCcEEEEchH--HcccccC
Confidence 99999999999999997 777778889999999999 55799 599999999999 99999988653 3444554
Q ss_pred chhhhhccCCceeEEEEEEEEeEecCCccEEEEEeCCCHHHHHHHHHHHHHc
Q 015664 300 LTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTIKDAADVAIATMLS 351 (403)
Q Consensus 300 L~~~~~Gs~GtlGIIT~~tLkl~p~p~~~~~~~~~f~~~~~a~~~~~~i~~~ 351 (403)
... +. .+| |||+++|||.|.+ +.++++..+.+.++++.
T Consensus 153 ~s~-~~-~~g---IVt~~~~~L~~~~---------~~~i~~~~~~v~~~R~~ 190 (268)
T 2gqt_A 153 KSH-LP-PGG---IVTRVRLKLKERP---------KEEILRRMAEVDRARKG 190 (268)
T ss_dssp BCC-CS-TTC---EEEEEEECCEECC---------HHHHHHHHHHHHHHTTT
T ss_pred CCC-cC-CCc---eEEEEEEEEEeCC---------HHHHHHHHHHHHHHHHh
Confidence 432 11 133 9999999999974 35566666666666554
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.89 E-value=3e-23 Score=193.83 Aligned_cols=126 Identities=27% Similarity=0.356 Sum_probs=114.3
Q ss_pred EeeecCcEEEEccCCCHHHHHHHHhcCCCeecCCCC-ccccccccccccccCCCccccccccceEEEEEEEeCCCeEEEc
Q 015664 209 ALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPG-PGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKT 287 (403)
Q Consensus 209 ~id~~~~~v~VeaGv~~~~L~~~l~~~Gl~~p~~~~-~~~TvGG~ia~n~~G~~s~~yG~~~D~V~~levV~~dG~iv~~ 287 (403)
++|+++.+++||||+++.+|+++|.++|++++..|+ .+.||||++++|++| .+||.. |+|++++||++||+++++
T Consensus 2 ~vd~~~~~v~V~aGv~l~~L~~~l~~~Gl~~~~~Pg~~~~tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~i~~~ 77 (219)
T 2yvs_A 2 EVHAADQYLVAPGEADLLEVHARLAGTGLFPPFPPVELPGGVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGRRVRA 77 (219)
T ss_dssp EEETTTTEEEEETTCCHHHHHHHHTTTTEECSSCSEECTTHHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSCEEEE
T ss_pred eEcCCCCEEEEcCCCcHHHHHHHHHHcCCEEeccCCCCCCchhheeccCccc---ccCCCc-cEEEEEEEEeCCCCEEEE
Confidence 689999999999999999999999999999998876 345999999999988 799999 999999999999999998
Q ss_pred ccccccccccccchhhhhccCCceeEEEEEEEEeEecCCccEEEEEeCCCH
Q 015664 288 ASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTI 338 (403)
Q Consensus 288 ~~~~~~~~~g~dL~~~~~Gs~GtlGIIT~~tLkl~p~p~~~~~~~~~f~~~ 338 (403)
+....++..||||+|+++|++|+|||||+++||++|.|+........+.++
T Consensus 78 ~~~~~kn~~gydl~~~~~Gs~G~lGIVt~~tlrl~p~~~~~~~~~~~~~~~ 128 (219)
T 2yvs_A 78 GGVVVKNVQGYDLVRLFVGSFGLLGRAEEVVLRLRPGRAQAFLRRPFSGSF 128 (219)
T ss_dssp ECSSCSSSSCSCHHHHHTTCTTTTCEEEEEEEECEECSEEEEEEEECCSSC
T ss_pred CCccccCCCCcchHHHhccCCCceEEEEEEEEEEEECCcccEEEEEecCCH
Confidence 876567788999999999999999999999999999998877776666654
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.58 E-value=9e-08 Score=92.46 Aligned_cols=153 Identities=18% Similarity=0.093 Sum_probs=95.8
Q ss_pred CcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCcc--cccCCCcEEEEcCCCCCcEEeeecCcEEEEccCCCHHHH
Q 015664 151 PDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGH--TLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMEL 228 (403)
Q Consensus 151 P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~--~~~~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~~~L 228 (403)
+-.+++|+|.+|+.++++.. +.+..+.||||++.-. .-....+++||++++..+..+..+++.+++++|+++.+|
T Consensus 5 ~~~~~~P~s~~ea~~ll~~~---~~~~~ilaGGT~ll~~~~~~~~~~~~lIdl~~i~eL~~i~~~~~~l~iGA~~tl~~l 81 (287)
T 1ffv_C 5 RFEYHAPKSVGEAVALLGQL---GSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREEGSTVVIGAMTVENDL 81 (287)
T ss_dssp CCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEEETTEEEEETTCBHHHH
T ss_pred cceEECCCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEecCCEEEEccCCcHHHH
Confidence 44688999999999988753 3578999999997311 000124799999864333333445667999999999999
Q ss_pred HHH-HhcCCCe-e----cCCCCc----cccccccccccccCCCccccccccceEE-------EEEEEeCCCeEEEccccc
Q 015664 229 NEY-LEPYGLF-F----PLDPGP----GATIGGMCATRCSGSLAVRYGTMRDNVI-------NLKVVLANGDVVKTASRA 291 (403)
Q Consensus 229 ~~~-l~~~Gl~-~----p~~~~~----~~TvGG~ia~n~~G~~s~~yG~~~D~V~-------~levV~~dG~iv~~~~~~ 291 (403)
.+. +.++++. + ....++ .+||||++++|.. ..|.+. .+++..++| ..+....
T Consensus 82 ~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~---------~~D~~~~l~Al~A~v~~~~~~G-~r~i~~~- 150 (287)
T 1ffv_C 82 ISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP---------GNDHPALSIAVEAHFVLEGPNG-RRTVPAD- 150 (287)
T ss_dssp HHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT---------TCSHHHHHHHTTCEEEEEETTE-EEEEEST-
T ss_pred hhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCC---------cHHHHHHHHHcCcEEEEEcCCc-eEEEEHH-
Confidence 963 3333332 1 112233 4999999999943 344443 588888998 3333222
Q ss_pred ccccccccchhhhhccCCceeEEEEEEEEeEe
Q 015664 292 RKSAAGYDLTRLIIGSEGTLGIITEVTLRLQK 323 (403)
Q Consensus 292 ~~~~~g~dL~~~~~Gs~GtlGIIT~~tLkl~p 323 (403)
+.-.+|.-..+- .| .||++++|.+.+
T Consensus 151 -df~~g~~~t~l~---~~--eii~~i~ip~~~ 176 (287)
T 1ffv_C 151 -GFFLGTYMTLLE---EN--EVMVEIRVPAFA 176 (287)
T ss_dssp -TTEEETTEESCC---TT--CEEEEEEEECCC
T ss_pred -HHhcCcccccCC---CC--CEEEEEEecCCC
Confidence 112233211111 12 489999987754
No 30
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=98.07 E-value=2.4e-06 Score=87.65 Aligned_cols=123 Identities=15% Similarity=0.094 Sum_probs=81.2
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCcc--cccCCCcEEEEcCCCCCcEEeeecCcEEEEccCCCHH
Q 015664 149 NIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGH--TLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWM 226 (403)
Q Consensus 149 ~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~--~~~~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~~ 226 (403)
+....+++|+|.+|+.++++.. . +..+.||||++.-. .-....+++||++++..+..+..++..+++++++++.
T Consensus 175 G~a~~y~~P~sl~ea~~ll~~~---~-~a~ilaGGT~L~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vtl~ 250 (462)
T 2w3s_A 175 GQTAPAFLPETSDALADWYLAH---P-EATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPDGYGIGAGVTIA 250 (462)
T ss_dssp ----CCBCCSSHHHHHHHHHHC---T-TCEEESSCTTTTHHHHTSCCCCCSEEECTTCGGGSCEEEETTEEEEETTCBHH
T ss_pred CCccEEEecCCHHHHHHHHhhC---C-CCEEEeCCchhhhhhhccCCCCCEEEEcCCChhhCcEEEcCCEEEEccCCcHH
Confidence 3445678999999999988753 2 57889999998421 0011247899998843332333456679999999999
Q ss_pred HHHHHHhcCCCe-e----cCCCCcc----ccccccccccccCCCccccccccceEE----EEEEEeCCC
Q 015664 227 ELNEYLEPYGLF-F----PLDPGPG----ATIGGMCATRCSGSLAVRYGTMRDNVI----NLKVVLANG 282 (403)
Q Consensus 227 ~L~~~l~~~Gl~-~----p~~~~~~----~TvGG~ia~n~~G~~s~~yG~~~D~V~----~levV~~dG 282 (403)
+|.+.+.+ .+. + ....++. +||||+++++.. .+.+...++ .+++..++|
T Consensus 251 ~l~~~l~~-~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp------~sD~~~~L~ALdA~v~l~~~~G 312 (462)
T 2w3s_A 251 ALRAFAEG-PHPALAGLLRRFASEQVRQVATIGGNIANGSP------IGDGPPALIAMGASLTLRRGQE 312 (462)
T ss_dssp HHHHHHTT-TCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCT------TCSHHHHHHHTTCEEEEEBTTB
T ss_pred HHHHHHHH-HhHHHHHHHHHhCChhheeeEEcccccccCCC------cchHHHHHHHcCCEEEEEeCCc
Confidence 99988543 332 2 3233333 999999999853 244555555 677777777
No 31
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.85 E-value=1.5e-05 Score=76.90 Aligned_cols=120 Identities=19% Similarity=0.132 Sum_probs=79.3
Q ss_pred CcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCcc-cc-cCCCcEEEEcCCCCCcEEeeecCcEEEEccCCCHHHH
Q 015664 151 PDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGH-TL-SPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMEL 228 (403)
Q Consensus 151 P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~-~~-~~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~~~L 228 (403)
+--+++|+|.+|+.++++.. +-+..+.+|||++.-. -. ....+++||++++..+..+..+++.+++++++++.+|
T Consensus 5 ~~~~~~P~sl~ea~~ll~~~---~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~~t~~~l 81 (288)
T 1n62_C 5 SFDYHRPKSIADAVALLTKL---GEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIREEGTDVVIGAMTTQHAL 81 (288)
T ss_dssp CCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEEETTEEEEETTCBHHHH
T ss_pred ceEEECcCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEecCCEEEEccCCcHHHH
Confidence 44688999999999888643 3457889999996321 00 0134799999876544444556778999999999999
Q ss_pred HH--HHhcCCCe-ec----CCCCc----cccccccccccccCCCccccccccceEE-------EEEEEeCCCe
Q 015664 229 NE--YLEPYGLF-FP----LDPGP----GATIGGMCATRCSGSLAVRYGTMRDNVI-------NLKVVLANGD 283 (403)
Q Consensus 229 ~~--~l~~~Gl~-~p----~~~~~----~~TvGG~ia~n~~G~~s~~yG~~~D~V~-------~levV~~dG~ 283 (403)
.+ .+.++ +. +. ...++ .+||||+++++. ...|.+. .+++..++|+
T Consensus 82 ~~~~~~~~~-~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~---------p~sD~~~~L~Al~A~v~l~~~~G~ 144 (288)
T 1n62_C 82 IGSDFLAAK-LPIIRETSLLIADPQIRYMGTIGGNAANGD---------PGNDMPALMQCLGAAYELTGPEGA 144 (288)
T ss_dssp HHCHHHHHH-CHHHHHHHTTSSCHHHHHHCBHHHHHHSCC---------TTCSHHHHHHHHTCEEEEEETTEE
T ss_pred hcChHHHHH-HHHHHHHHHHhCCHHHHccccccchhccCC---------CchHHHHHHHHhCcEEEEEeCCcc
Confidence 94 55442 21 11 11122 489999999983 2344443 5666777773
No 32
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=97.59 E-value=0.00014 Score=70.48 Aligned_cols=106 Identities=13% Similarity=0.015 Sum_probs=72.9
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCccc--ccCCCcEEEEcCCCCCcEEeeecCcEEEEccCCCH
Q 015664 148 VNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHT--LSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGW 225 (403)
Q Consensus 148 ~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~~--~~~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~ 225 (403)
++.+..+++|+|.+|+.++++. +. ...+.+|||++.-.- -......+||++++..+..|..+++.+++++++++
T Consensus 7 ~g~~~~y~~P~sl~ea~~ll~~---~~-~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~ 82 (305)
T 3nvz_B 7 EGERVTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACAL 82 (305)
T ss_dssp ECSSCEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECSSEEEEETTCBH
T ss_pred cCCCeEEEccCCHHHHHHHHHh---CC-CCEEEECccHHHHHHhcCCCCCCEEEECCCChhhcceEECCCeEEEccCCcH
Confidence 3567789999999999887644 22 357889999973110 00124689999986655555556778999999999
Q ss_pred HHHHHHHhcC----C----Ceec-------CCCCc----cccccccccccc
Q 015664 226 MELNEYLEPY----G----LFFP-------LDPGP----GATIGGMCATRC 257 (403)
Q Consensus 226 ~~L~~~l~~~----G----l~~p-------~~~~~----~~TvGG~ia~n~ 257 (403)
.+|.+.+.++ . ..+| .-.++ .+||||+++++.
T Consensus 83 ~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~ 133 (305)
T 3nvz_B 83 SSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITAS 133 (305)
T ss_dssp HHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCC
T ss_pred HHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCC
Confidence 9999886532 0 0111 11222 599999999984
No 33
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=96.99 E-value=0.00058 Score=65.67 Aligned_cols=102 Identities=14% Similarity=0.030 Sum_probs=67.8
Q ss_pred CcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCccc--ccCCCcEEEEcCCCCCcEEeeecCcEEEEccCCCHHHH
Q 015664 151 PDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHT--LSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMEL 228 (403)
Q Consensus 151 P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~~--~~~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~~~L 228 (403)
+--+++|+|.+|+.++++- +-...+.+|||++.-.- -......+||++++..+..|..+++.+++++++++.+|
T Consensus 5 ~f~y~~P~sl~ea~~ll~~----~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~~l 80 (288)
T 1t3q_C 5 AFSYRAPASLQEVIQVLAD----DPDARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQSAGILSVGAMVTHFRN 80 (288)
T ss_dssp CCEEECCSSHHHHHHHHHH----CTTCEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEEETTEEEEETTCBHHHH
T ss_pred CceEECCCCHHHHHHHHhh----CCCCEEEeCchhHHHHHhcCCCCCCEEEECCCChhhcCeEEcCCEEEEcCCCcHHHH
Confidence 4568899999999888763 22467889999962110 00123689999986655445556778999999999999
Q ss_pred HH--HHhcCCCeec----CCCCc----ccccccccccc
Q 015664 229 NE--YLEPYGLFFP----LDPGP----GATIGGMCATR 256 (403)
Q Consensus 229 ~~--~l~~~Gl~~p----~~~~~----~~TvGG~ia~n 256 (403)
.+ .+.++--.+. .-.++ .+|+||++++.
T Consensus 81 ~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a 118 (288)
T 1t3q_C 81 KTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHA 118 (288)
T ss_dssp HHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHT
T ss_pred hcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccC
Confidence 86 4443210111 11111 48999999876
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=94.96 E-value=0.049 Score=52.32 Aligned_cols=104 Identities=17% Similarity=0.221 Sum_probs=67.6
Q ss_pred CcEEEEcCCHHHHHHHHHHHHhCCC-CeeeeCCCCCCCccc-c-cCCCcEEEEcCCCCCcEEeeecCcEEEEccCCCHHH
Q 015664 151 PDIIVFPRSEDEVSKIVKCCDKHKV-PIIPYGGATSIEGHT-L-SPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWME 227 (403)
Q Consensus 151 P~~Vv~P~s~eeV~~iv~~a~~~~~-pv~~~GgG~s~~g~~-~-~~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~~~ 227 (403)
+--+++|+|.+|..++++ +++- ...+.+|||++.-.- . ......+||++++..+..|..+++.+++++++++.+
T Consensus 3 ~f~y~~P~sl~ea~~ll~---~~~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~~ 79 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLH---QYKDVPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRVEENTIHIGALSTFTQ 79 (296)
T ss_dssp CCEEECCSSHHHHHHHHH---HTTTSCCEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEECSSEEEEETTCBHHH
T ss_pred ceeEeCCCCHHHHHHHHH---hCCCCCeEEEECCcHHHHHhhcCCCCCCeEEEcccChhhcceEEcCCeEEEccCCcHHH
Confidence 346789999999877664 3332 467889999973210 0 012468999998765555566778899999999999
Q ss_pred HHHH--HhcC-C-Ce--ecCCCCc----cccccccccccc
Q 015664 228 LNEY--LEPY-G-LF--FPLDPGP----GATIGGMCATRC 257 (403)
Q Consensus 228 L~~~--l~~~-G-l~--~p~~~~~----~~TvGG~ia~n~ 257 (403)
|.+. +.++ . +. +..-.++ .+||||++++..
T Consensus 80 l~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNi~~a~ 119 (296)
T 3hrd_C 80 IENHPFIRSHVRALYKAASQVGSPQIRNLGTIGGNLSTSS 119 (296)
T ss_dssp HHHCHHHHHHCHHHHHHHHTSSCHHHHHHCBHHHHHHHTC
T ss_pred HHhChhhhhHhHHHHHHHHHhCCHHHhcceehhhhhccCC
Confidence 9742 2211 0 00 1111111 499999998763
No 35
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=92.78 E-value=0.074 Score=61.04 Aligned_cols=105 Identities=13% Similarity=0.015 Sum_probs=70.3
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCccc--ccCCCcEEEEcCCCCCcEEeeecCcEEEEccCCCHH
Q 015664 149 NIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHT--LSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWM 226 (403)
Q Consensus 149 ~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~~--~~~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~~ 226 (403)
+.+..+++|.|.+|+.++++. +. .-.+.+|||++.-.- -.....++||++++..+..|..++..+++++++++.
T Consensus 231 ~~~~~~~~P~sl~ea~~ll~~---~~-~a~lvaGgT~l~~~~k~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vtl~ 306 (1332)
T 3unc_A 231 GERVTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACALS 306 (1332)
T ss_dssp CSSCEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECSSEEEEETTCBHH
T ss_pred CCceEEEccCCHHHHHHHHhh---CC-CCEEEEeCcHHHHHhhcCCCCCCeEEEcCCCHHhCceEEeCCEEEEEecChHH
Confidence 355679999999999887654 21 246789999873110 001236899999876555556667789999999999
Q ss_pred HHHHHHhcC-------CC-eecC-------CCCc----cccccccccccc
Q 015664 227 ELNEYLEPY-------GL-FFPL-------DPGP----GATIGGMCATRC 257 (403)
Q Consensus 227 ~L~~~l~~~-------Gl-~~p~-------~~~~----~~TvGG~ia~n~ 257 (403)
+|.+.+.+. .. .+|. -.+. .+||||+|++..
T Consensus 307 ~l~~~l~~~~~~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNI~~as 356 (1332)
T 3unc_A 307 SVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITAS 356 (1332)
T ss_dssp HHHHHHHHHHHHSCGGGCHHHHHHHHHHHTSSCHHHHHHCBHHHHHHHCC
T ss_pred HHHHHHHHHhhhccccccchhHHHHHHHHHhCCHHHhceeeccceecccC
Confidence 999876432 00 0121 1111 399999999874
No 36
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=91.55 E-value=0.23 Score=48.30 Aligned_cols=97 Identities=15% Similarity=0.216 Sum_probs=64.1
Q ss_pred CcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCcc--cccCCCcEEEEcCCCCCcEEeeec-CcEEEEccCCCHHH
Q 015664 151 PDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGH--TLSPNGGVCIDLSLMKSVKALHIE-DMDVVVEPGIGWME 227 (403)
Q Consensus 151 P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~--~~~~~~gvvIdl~~mn~i~~id~~-~~~v~VeaGv~~~~ 227 (403)
|--+++|+|.+|..++++ + -.-.+.+|||++.-. .-...-..+||++++..+..|..+ ++.+++++++++.+
T Consensus 6 ~f~y~~P~sl~ea~~ll~---~--~~a~~lAGGT~l~~~~k~~~~~p~~lIdi~~i~eL~~I~~~~~~~l~IGA~vt~~~ 80 (324)
T 1rm6_B 6 DFRTHRPATLADAVNALA---A--EATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLADGSLRIGAGATLEA 80 (324)
T ss_dssp CCEEECCSSHHHHHHHTT---S--TTEEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTCEEECTTSCEEEETTCBHHH
T ss_pred ceEEEccCCHHHHHHHHh---C--CCCEEEECchhHHHHHhccCCCCCEEEECCCChhhcceEECCCCeEEEccCCcHHH
Confidence 345889999999888775 2 246788999997311 000123789999987555445544 34799999999999
Q ss_pred HHHH--HhcCCCeecC---------CCCc--cccccccccc
Q 015664 228 LNEY--LEPYGLFFPL---------DPGP--GATIGGMCAT 255 (403)
Q Consensus 228 L~~~--l~~~Gl~~p~---------~~~~--~~TvGG~ia~ 255 (403)
|.+. +.++ +|. ++.. .+||||++++
T Consensus 81 l~~~~~~~~~---~p~L~~a~~~ias~qIRN~aTiGGNl~~ 118 (324)
T 1rm6_B 81 IAEHDAIRTT---WPALAQAAESVAGPTHRAAATLGGNLCQ 118 (324)
T ss_dssp HHHCHHHHHH---SHHHHHHHHHSSCHHHHHHCBHHHHHTC
T ss_pred HHhChHHHHH---HHHHHHHHHHhCCHHHcceeEeeeeccc
Confidence 9864 2221 221 1111 4999999974
No 37
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=86.10 E-value=0.47 Score=54.48 Aligned_cols=102 Identities=11% Similarity=0.092 Sum_probs=65.6
Q ss_pred cEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCc--ccccCCCcEEEEcCCCCCcEEeeecCcEEEEccCCCHHHHH
Q 015664 152 DIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEG--HTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELN 229 (403)
Q Consensus 152 ~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g--~~~~~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~~~L~ 229 (403)
...++|.|.+|+.++...-- +. .+..|+|.+.= ..-...-.++||+.+..++..+..++..+++++++++.++.
T Consensus 241 ~~w~~P~tl~el~~l~~~~p--~a--~lvaGnT~~gl~~~~~~~~~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~~~ 316 (1335)
T 3zyv_A 241 TTWIAPGTLNDLLELKMKHP--SA--PLVIGNTYLGLHMKFTDVSYPIIISPARILELFVVTNTKQGLTLGTGLSLTQVK 316 (1335)
T ss_dssp CEEEECSSHHHHHHHHHHCT--TS--CBCSSCTTHHHHHC--CCCCSEEECCTTCGGGSCEECCTTEEEEETTCBHHHHH
T ss_pred ceEecCCCHHHHHHHHHHCC--CC--eEEEecccceeeEeecCCCCCeEEEcCcchhHheEEecCCEEEEcccCcHHHHH
Confidence 45789999999988754322 22 34567776520 00111236899988766665566677889999999999999
Q ss_pred HHHhcC----C----Ceec-------CCCCc----cccccccccccc
Q 015664 230 EYLEPY----G----LFFP-------LDPGP----GATIGGMCATRC 257 (403)
Q Consensus 230 ~~l~~~----G----l~~p-------~~~~~----~~TvGG~ia~n~ 257 (403)
+.|.+. + ..++ .-.+. .+||||+|++.+
T Consensus 317 ~~l~~~~~~~~~~~~~~~~~l~~~l~~fAs~qIRN~aTigGNI~~as 363 (1335)
T 3zyv_A 317 NVLSDVVSRLPKEKTQIYCALLKQLKTLAGQQIRNVASLGGHIISRL 363 (1335)
T ss_dssp HHHHHHHTTSCTTTCTTHHHHHHHHTTSSCHHHHHHCBHHHHHHTCC
T ss_pred HHHHHHHhhcchhhhhhHHHHHHHHHHhcchhhcCcccccCceeccC
Confidence 888641 1 0111 11111 499999998763
No 38
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=42.70 E-value=66 Score=26.41 Aligned_cols=38 Identities=8% Similarity=0.062 Sum_probs=31.7
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHhCCCCe-eeeCCCCC
Q 015664 148 VNIPDIIVFPRSEDEVSKIVKCCDKHKVPI-IPYGGATS 185 (403)
Q Consensus 148 ~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv-~~~GgG~s 185 (403)
.+.+..|+...+++|+.++.+.|++.|+|. .++-.|..
T Consensus 46 ~G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 46 EGQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLT 84 (123)
T ss_dssp GCSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTCC
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 367899999999999999999999999996 45555543
No 39
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=38.15 E-value=35 Score=27.79 Aligned_cols=37 Identities=24% Similarity=0.230 Sum_probs=31.2
Q ss_pred CCCCCcEEEEcCCHHHHHHHHHHHHhCCCCee-eeCCC
Q 015664 147 AVNIPDIIVFPRSEDEVSKIVKCCDKHKVPII-PYGGA 183 (403)
Q Consensus 147 ~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~-~~GgG 183 (403)
..+.|..|+...+++|+.++.+.|.+.|+|.. ++=.|
T Consensus 51 ~~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG 88 (120)
T 1xty_A 51 HQGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAG 88 (120)
T ss_dssp HTTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred HCCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 34789999999999999999999999999963 44444
No 40
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=36.90 E-value=37 Score=27.75 Aligned_cols=38 Identities=18% Similarity=0.155 Sum_probs=31.2
Q ss_pred CCCCCcEEEEcCCHHHHHHHHHHHHhCCCCee-eeCCCC
Q 015664 147 AVNIPDIIVFPRSEDEVSKIVKCCDKHKVPII-PYGGAT 184 (403)
Q Consensus 147 ~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~-~~GgG~ 184 (403)
..+.|..|++..+++|+.++.+.|.+.|+|.. ++-.|+
T Consensus 52 ~~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~ 90 (121)
T 1wn2_A 52 REGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGL 90 (121)
T ss_dssp HTTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTC
T ss_pred HCCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCc
Confidence 34688999999999999999999999999964 444443
No 41
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=33.46 E-value=1e+02 Score=24.76 Aligned_cols=38 Identities=16% Similarity=0.068 Sum_probs=31.2
Q ss_pred CCCCCcEEEEcCCHHHHHHHHHHHHhCCCCee-eeCCCC
Q 015664 147 AVNIPDIIVFPRSEDEVSKIVKCCDKHKVPII-PYGGAT 184 (403)
Q Consensus 147 ~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~-~~GgG~ 184 (403)
..+.|..|+...+++|+.++.+.|.+.|+|.. ++-.|+
T Consensus 48 ~~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~ 86 (117)
T 1rlk_A 48 DEGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGY 86 (117)
T ss_dssp HTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCS
T ss_pred HCCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 34689999999999999999999999999963 444443
No 42
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=31.51 E-value=46 Score=25.69 Aligned_cols=21 Identities=14% Similarity=-0.056 Sum_probs=18.8
Q ss_pred cEEEEcCCHHHHHHHHHHHHh
Q 015664 152 DIIVFPRSEDEVSKIVKCCDK 172 (403)
Q Consensus 152 ~~Vv~P~s~eeV~~iv~~a~~ 172 (403)
-.++.|++-+|.++++...++
T Consensus 7 Ivv~~P~sy~Da~~I~d~Lr~ 27 (87)
T 3p04_A 7 IVPVELHSFEDAQVIGGAFRD 27 (87)
T ss_dssp CEEEECSSGGGHHHHHHHHHT
T ss_pred EEEEecCcHHHHHHHHHHHHC
Confidence 478999999999999998776
No 43
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=28.93 E-value=62 Score=26.08 Aligned_cols=31 Identities=19% Similarity=0.203 Sum_probs=27.9
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHhCCCCee
Q 015664 148 VNIPDIIVFPRSEDEVSKIVKCCDKHKVPII 178 (403)
Q Consensus 148 ~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~ 178 (403)
.+.|..|+...+++|+.++.+.|.+.|+|..
T Consensus 47 ~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~ 77 (115)
T 2zv3_A 47 EGQKKVVVKVNSEKELIDIYNKARSEGLPCS 77 (115)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEE
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHcCCCEE
Confidence 4689999999999999999999999999863
No 44
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=23.70 E-value=1e+02 Score=24.78 Aligned_cols=30 Identities=10% Similarity=0.238 Sum_probs=27.1
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHhCCCCee
Q 015664 149 NIPDIIVFPRSEDEVSKIVKCCDKHKVPII 178 (403)
Q Consensus 149 ~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~ 178 (403)
+.|..|++..+++|+.++.+.|.+.|+|..
T Consensus 50 g~~KVvlk~~~e~~l~~l~~~a~~~gl~~~ 79 (117)
T 1q7s_A 50 GQPKVVVKAPDEETLIALLAHAKMLGLTVS 79 (117)
T ss_dssp TCCEEEEEESSHHHHHHHHHHHHHTTCCEE
T ss_pred CCeeEEEEcCCHHHHHHHHHHHHHCCCCEE
Confidence 568999999999999999999999999853
No 45
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=23.19 E-value=3.6e+02 Score=25.17 Aligned_cols=85 Identities=15% Similarity=0.121 Sum_probs=51.2
Q ss_pred CCC-cEEEEcCCHHHHHHHHHHHHhCCCCeeee---CCCCCCCcccccCCCcEEEEcCCCCCcEEeeecCcEEEEccCCC
Q 015664 149 NIP-DIIVFPRSEDEVSKIVKCCDKHKVPIIPY---GGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIG 224 (403)
Q Consensus 149 ~~P-~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~---GgG~s~~g~~~~~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~ 224 (403)
..| ..|+.|.+.+|...+++.|-+++.|+.++ +-..... ..++. ...-+ .+.+...+..+...+.|.-|..
T Consensus 138 ~iP~l~V~~Psd~~e~~~~l~~a~~~~~Pv~i~~p~~l~r~~~-~~~~~-~~~~~---~~Gk~~~~~~g~dv~iva~G~~ 212 (324)
T 1w85_B 138 QQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFR-QEVPE-GEYTI---PIGKADIKREGKDITIIAYGAM 212 (324)
T ss_dssp TSTTCEEECCSSHHHHHHHHHHHHHSSSCEEEEEETTTSSSCC-EECCS-SCCCC---CTTCCEEEECCSSEEEEECTTH
T ss_pred cCCCCEEEeeCCHHHHHHHHHHHHHcCCCEEEEechHhcCCCC-CCCCC-ccccc---cCCceEEEecCCCEEEEEecHH
Confidence 356 48999999999999999999999999985 2211110 11111 10001 2233222334456677888888
Q ss_pred HHHHHH---HHhcCCCe
Q 015664 225 WMELNE---YLEPYGLF 238 (403)
Q Consensus 225 ~~~L~~---~l~~~Gl~ 238 (403)
.....+ .|+++|..
T Consensus 213 ~~~a~~Aa~~L~~~Gi~ 229 (324)
T 1w85_B 213 VHESLKAAAELEKEGIS 229 (324)
T ss_dssp HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhcCCC
Confidence 876654 45556754
No 46
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=21.93 E-value=1.2e+02 Score=22.63 Aligned_cols=46 Identities=24% Similarity=0.239 Sum_probs=30.9
Q ss_pred cchhhhhccCCceeEEEEEEEEeEecCCccEEEEEeCCCHHHHHHHHHHH
Q 015664 299 DLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTIKDAADVAIAT 348 (403)
Q Consensus 299 dL~~~~~Gs~GtlGIIT~~tLkl~p~p~~~~~~~~~f~~~~~a~~~~~~i 348 (403)
+|..+|. .+|-|.++.+...+.....-..++.|.+.++|..++..+
T Consensus 31 ~l~~~F~----~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l 76 (105)
T 2dnh_A 31 DVLRLFQ----PFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHAL 76 (105)
T ss_dssp HHHHHHT----TTSCEEEEEEEECSSSCEEEEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHHH----hcCCeEEEEEEECCCCCcCcEEEEEeCCHHHHHHHHHHH
Confidence 5655553 457788888766543233456788999999988877653
No 47
>3llb_A Uncharacterized protein; protein PA3983, unknown function, structural genomics, PSI2, MCSG, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: d.145.1.0
Probab=21.30 E-value=1.4e+02 Score=22.07 Aligned_cols=39 Identities=18% Similarity=0.209 Sum_probs=29.6
Q ss_pred cCcEEEEccCCCHHHHHHHHhcCCCeecCCCCcccccccccccc
Q 015664 213 EDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGATIGGMCATR 256 (403)
Q Consensus 213 ~~~~v~VeaGv~~~~L~~~l~~~Gl~~p~~~~~~~TvGG~ia~n 256 (403)
+++...|.+-+.+.+|++.+. +.+|. ...-|+||++...
T Consensus 7 ~dg~~~v~G~~~l~dl~~~l~---~~l~~--~~~~Tl~G~i~~~ 45 (83)
T 3llb_A 7 PSGDFIVKALTPVDAFNDFFG---SEFSD--EEFDTVGGLVMSA 45 (83)
T ss_dssp TTSCEEEETTCBHHHHHHHHC---CCCCT--TTCSBHHHHHHHH
T ss_pred CCCEEEEEccCCHHHHHHHhC---CCCCC--CCCcCHHHHHHHH
Confidence 456678999999999999864 45553 2347999999776
No 48
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=21.08 E-value=85 Score=23.94 Aligned_cols=34 Identities=18% Similarity=0.323 Sum_probs=28.8
Q ss_pred EEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCC
Q 015664 153 IIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSI 186 (403)
Q Consensus 153 ~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~ 186 (403)
++-...+.+|+.+|++..+.+|.|+++.-.|.+.
T Consensus 30 yirtatssqdirdiiksmkdngkplvvfvngasq 63 (112)
T 2lnd_A 30 YIRTATSSQDIRDIIKSMKDNGKPLVVFVNGASQ 63 (112)
T ss_dssp TEEEECSHHHHHHHHHHHTTCCSCEEEEECSCCH
T ss_pred eeeeccchhhHHHHHHHHHhcCCeEEEEecCccc
Confidence 4556788999999999999999999998777654
No 49
>2r2z_A Hemolysin; APC85144, enterococcus faecalis V583, STRU initiative, midwest center for structural genomics, MCSG; 1.20A {Enterococcus faecalis} SCOP: d.145.1.4
Probab=21.03 E-value=1.2e+02 Score=22.99 Aligned_cols=39 Identities=23% Similarity=0.214 Sum_probs=30.1
Q ss_pred cCcEEEEccCCCHHHHHHHHhcCCCeecCCCCcccccccccccc
Q 015664 213 EDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGATIGGMCATR 256 (403)
Q Consensus 213 ~~~~v~VeaGv~~~~L~~~l~~~Gl~~p~~~~~~~TvGG~ia~n 256 (403)
+++...|.+.+.+.+|++.+. +.+|.. ..-|+||++...
T Consensus 14 ~dg~~~v~G~~~l~dl~~~l~---~~l~~~--~~~TlgG~i~~~ 52 (93)
T 2r2z_A 14 ADNEYLVQGRMLIDEFNEVFE---TDLHMS--DVDTMAGYLITA 52 (93)
T ss_dssp ETTEEEEETTSBHHHHHHHHT---CCCCCT--TCCBHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHhC---CCCCCC--CcccHHHHHHHH
Confidence 566788999999999999874 455532 357999999765
No 50
>2kng_A Protein LSR2; DNA-binding domain, immune response, DNA binding protein; NMR {Mycobacterium tuberculosis}
Probab=20.64 E-value=44 Score=23.58 Aligned_cols=22 Identities=9% Similarity=0.178 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHhCCCCeeeeCC
Q 015664 161 DEVSKIVKCCDKHKVPIIPYGG 182 (403)
Q Consensus 161 eeV~~iv~~a~~~~~pv~~~Gg 182 (403)
++.++|-+||+++|.+|-.||-
T Consensus 13 ~~~~aIR~WAr~nG~~VsdRGR 34 (55)
T 2kng_A 13 EQSAAIREWARRNGHNVSTRGR 34 (55)
T ss_dssp THHHHHHHHHHHTTCCCCSSSC
T ss_pred cChHHHHHHHHHcCCcCCCCCC
Confidence 3778899999999999998874
No 51
>3ulh_A THO complex subunit 4; nuclear protein, RNA binding, structural genomi center for structural genomics, JCSG, protein structure INI PSI-biology; 2.54A {Homo sapiens} PDB: 1no8_A
Probab=20.52 E-value=1.2e+02 Score=22.74 Aligned_cols=46 Identities=15% Similarity=0.236 Sum_probs=31.5
Q ss_pred cchhhhhccCCceeEEEEEEEEeEecCCccEEEEEeCCCHHHHHHHHHHH
Q 015664 299 DLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTIKDAADVAIAT 348 (403)
Q Consensus 299 dL~~~~~Gs~GtlGIIT~~tLkl~p~p~~~~~~~~~f~~~~~a~~~~~~i 348 (403)
+|..+|. .+|-|.++.+...+.....-...+.|.+.++|..++..+
T Consensus 45 ~l~~~F~----~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~l 90 (107)
T 3ulh_A 45 DIQELFA----EFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQY 90 (107)
T ss_dssp HHHHHHH----TTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHHH----hcCCeEEEEEEECCCCCcceEEEEEECCHHHHHHHHHHh
Confidence 5555553 457888888776553333456788999999998887654
No 52
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=20.31 E-value=75 Score=30.41 Aligned_cols=31 Identities=13% Similarity=0.307 Sum_probs=27.8
Q ss_pred cEEEEcCCHHHHHHHHHHHHhCCCCeeeeCC
Q 015664 152 DIIVFPRSEDEVSKIVKCCDKHKVPIIPYGG 182 (403)
Q Consensus 152 ~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~Gg 182 (403)
..|+.|.+.+|...+++.|-+++.|+.++-.
T Consensus 154 l~V~~Psd~~e~~~~l~~a~~~~~Pv~i~~~ 184 (341)
T 2ozl_B 154 LKVVSPWNSEDAKGLIKSAIRDNNPVVVLEN 184 (341)
T ss_dssp CEEECCCSHHHHHHHHHHHHHSSSCEEEEEC
T ss_pred CEEEEeCCHHHHHHHHHHHHhcCCCEEEEEC
Confidence 4688899999999999999999999998754
No 53
>2pls_A CBS domain protein; APC86064.2, CORC/HLYC transporter associated domain, CBS DOM protein, structural genomics, PSI-2 structure initiative; 2.15A {Chlorobium tepidum tls} SCOP: d.145.1.4
Probab=20.13 E-value=1.6e+02 Score=21.81 Aligned_cols=41 Identities=29% Similarity=0.261 Sum_probs=29.9
Q ss_pred cCcEEEEccCCCHHHHHHHHhcCCCe-ecCCC-Ccccccccccccc
Q 015664 213 EDMDVVVEPGIGWMELNEYLEPYGLF-FPLDP-GPGATIGGMCATR 256 (403)
Q Consensus 213 ~~~~v~VeaGv~~~~L~~~l~~~Gl~-~p~~~-~~~~TvGG~ia~n 256 (403)
+++...|.+-+.+.+|++.+. +. +|... ...-|+||++...
T Consensus 7 ~dg~~~v~G~~~l~dl~~~l~---~~~l~~~~~~~~~Tl~G~i~~~ 49 (86)
T 2pls_A 7 EDGSWLLDGLIAVPELKDTLG---LRAVPEEEKGVYHTLSGMIMWL 49 (86)
T ss_dssp TTSCEEEETTCBHHHHHHHHT---CSCCTTTTSCSCCBHHHHHHHH
T ss_pred CCCeEEEEcccCHHHHHHHhC---CCcCCCccCCCcccHHHHHHHH
Confidence 456678999999999999874 44 55311 2357999999765
Done!