Query 015664
Match_columns 403
No_of_seqs 300 out of 2114
Neff 6.9
Searched_HMMs 13730
Date Mon Mar 25 16:33:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015664.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015664hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wvfa2 d.145.1.1 (A:7-242) Fl 100.0 2.4E-42 1.7E-46 324.8 22.5 213 113-325 13-236 (236)
2 d1w1oa2 d.145.1.1 (A:40-245) C 100.0 1.9E-39 1.4E-43 298.8 20.2 194 123-324 4-206 (206)
3 d1e8ga2 d.145.1.1 (A:6-273) Va 100.0 7.6E-37 5.5E-41 292.2 21.9 211 113-325 17-268 (268)
4 d1f0xa2 d.145.1.1 (A:9-273) D- 100.0 4E-31 2.9E-35 251.7 20.7 206 113-324 2-264 (265)
5 d2i0ka2 d.145.1.1 (A:58-273) C 100.0 2.4E-30 1.8E-34 238.7 15.0 171 148-323 28-215 (216)
6 d1hska1 d.145.1.2 (A:15-208) U 100.0 8.5E-28 6.2E-32 218.6 16.6 191 112-323 1-194 (194)
7 d1uxya1 d.145.1.2 (A:3-200) Ur 99.9 3.4E-24 2.5E-28 195.1 18.0 174 141-328 6-185 (198)
8 d1f0xa1 d.58.32.2 (A:274-567) 98.0 1.1E-08 8.3E-13 96.8 -9.7 85 262-347 13-98 (294)
9 d1ffvc2 d.145.1.3 (C:1-177) Ca 97.0 0.00065 4.8E-08 58.6 7.4 103 151-257 5-120 (177)
10 d1v97a6 d.145.1.3 (A:192-414) 96.9 0.00038 2.8E-08 62.3 4.9 78 152-233 43-122 (223)
11 d1jroa4 d.145.1.3 (A:179-345) 96.7 0.00033 2.4E-08 60.0 3.0 98 156-257 4-111 (167)
12 d1n62c2 d.145.1.3 (C:1-177) Ca 96.2 0.0022 1.6E-07 55.1 5.1 104 151-257 5-120 (177)
13 d1t3qc2 d.145.1.3 (C:1-176) Qu 95.1 0.021 1.6E-06 48.6 7.0 104 150-257 4-119 (176)
14 d1rm6b2 d.145.1.3 (B:1-216) 4- 94.3 0.039 2.9E-06 48.5 6.9 100 152-256 7-119 (216)
15 d1wvfa1 d.58.32.1 (A:243-521) 89.9 0.22 1.6E-05 44.5 6.3 65 329-393 4-91 (279)
16 d1e8ga1 d.58.32.1 (A:274-560) 85.9 0.0078 5.7E-07 54.7 -6.7 87 297-393 2-90 (287)
17 d1l0ba2 c.15.1.3 (A:1705-1801) 72.1 3 0.00022 31.1 5.3 71 100-179 5-75 (97)
18 d2o1ra1 d.145.1.4 (A:1-78) Hyp 42.0 24 0.0018 24.4 5.6 40 213-257 4-43 (78)
19 d2p13a1 d.145.1.4 (A:431-515) 32.5 16 0.0012 25.9 3.2 41 213-256 9-49 (85)
20 d2plia1 d.145.1.4 (A:5-88) Unc 32.2 52 0.0038 22.9 6.2 40 213-257 9-48 (84)
21 d2csua1 c.2.1.8 (A:1-129) Acet 29.5 47 0.0035 25.1 5.9 77 109-185 21-100 (129)
22 d1rlka_ c.131.1.1 (A:) Hypothe 27.2 40 0.0029 25.4 4.9 38 148-185 48-86 (116)
23 d1q7sa_ c.131.1.1 (A:) Bit1 (C 25.8 45 0.0033 25.1 5.0 31 148-178 49-79 (117)
24 d2p4pa1 d.145.1.4 (A:1-82) Hyp 25.5 55 0.004 22.6 5.2 41 213-256 4-44 (82)
25 d2plsa1 d.145.1.4 (A:345-428) 25.5 67 0.0048 22.2 5.7 43 212-257 4-48 (84)
26 d1no8a_ d.58.7.1 (A:) Nuclear 24.8 29 0.0021 23.5 3.5 46 299-348 16-61 (78)
27 d1y81a1 c.2.1.8 (A:6-121) Hypo 24.6 1.1E+02 0.0081 22.3 7.3 90 110-239 15-106 (116)
28 d1umdb1 c.36.1.7 (B:2-187) Bra 24.4 33 0.0024 27.8 4.3 29 152-180 142-170 (186)
29 d1vm6a3 c.2.1.3 (A:1-96,A:183- 22.6 27 0.0019 26.7 3.1 35 149-183 40-74 (128)
30 d2r2za1 d.145.1.4 (A:5-88) Put 22.6 66 0.0048 22.2 5.2 39 213-256 7-45 (84)
31 d1qupa2 d.58.17.1 (A:2-73) Cop 22.3 52 0.0038 22.1 4.4 29 210-238 38-66 (72)
32 d1jaka1 c.1.8.6 (A:151-506) be 22.2 22 0.0016 32.0 2.8 28 158-185 72-101 (356)
33 d2cpia1 d.58.7.1 (A:101-189) E 22.2 62 0.0045 22.4 5.0 40 309-348 33-76 (89)
34 d1f0xa1 d.58.32.2 (A:274-567) 21.9 52 0.0038 28.5 5.4 68 328-400 3-71 (294)
35 d2rk5a1 d.145.1.4 (A:5-88) Put 21.4 34 0.0025 23.8 3.3 39 213-256 4-42 (84)
36 d1cc8a_ d.58.17.1 (A:) ATX1 me 20.9 49 0.0036 22.3 4.0 30 209-238 36-65 (72)
37 d1x5oa1 d.58.7.1 (A:8-108) RNA 20.6 66 0.0048 22.7 4.9 45 299-347 34-78 (101)
38 d1fe0a_ d.58.17.1 (A:) ATX1 me 20.6 52 0.0038 21.8 4.0 30 209-238 31-60 (66)
39 d1yhta1 c.1.8.6 (A:16-359) Dis 20.3 25 0.0018 31.2 2.8 28 158-185 77-106 (344)
No 1
>d1wvfa2 d.145.1.1 (A:7-242) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]}
Probab=100.00 E-value=2.4e-42 Score=324.80 Aligned_cols=213 Identities=23% Similarity=0.343 Sum_probs=188.9
Q ss_pred HHHHHHHHHhcCC-CeeeChhhhhhccCCCCCcCcCCCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCcccc
Q 015664 113 QELVDELKAICQD-DMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTL 191 (403)
Q Consensus 113 ~~~~~~L~~~lg~-~v~~~~~~~~~~~~~~~s~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~~~ 191 (403)
++++++|++++|+ +|.+++++...|.+++++..+....|.+||+|+|+|||+++|++|+++++|+.++|+||++.++..
T Consensus 13 ~~~v~~l~~ivG~~~V~~~~~~~~~y~~d~~~~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~i~~~g~G~s~~~g~~ 92 (236)
T d1wvfa2 13 NKAVQKFRALLGDDNVLVESDQLVPYNKIMMPVENAAHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSA 92 (236)
T ss_dssp HHHHHHHHHHHCGGGEECSHHHHHHHHCCCSSSCGGGGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTT
T ss_pred HHHHHHHHHHcCCccEEECHHHHHHHhCccccccccCcCCCEEEecCCHHHHHHHHHHHHcCCcceeccccccccccccc
Confidence 4578999999995 688898888888887655555567899999999999999999999999999999999999865443
Q ss_pred c--CCCcEEEEcCCCCCcEEeeecCcEEEEccCCCHHHHHHHHhcCCCeecCCCCcccccccccc-ccccCCCccccccc
Q 015664 192 S--PNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGATIGGMCA-TRCSGSLAVRYGTM 268 (403)
Q Consensus 192 ~--~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~~~L~~~l~~~Gl~~p~~~~~~~TvGG~ia-~n~~G~~s~~yG~~ 268 (403)
. .+++|+|||++||+|+++|+++++++||||++|.||+++|.++|+.++++++..+++||.++ ++++|..+.+||.+
T Consensus 93 ~~~~~~~ividl~~mn~i~~id~~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~~~~~~~gG~i~~~~~~G~~~~~yG~~ 172 (236)
T d1wvfa2 93 APVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTFGQMYDYIQENNLPVMLSFSAPSAIAGPVGNTMDRGVGYTPYGEH 172 (236)
T ss_dssp SCSSTTCEEEECTTCCCEEEEETTTTEEEECTTCCHHHHHHHHHHTTCSEECCCCSSCTTCCHHHHHHTTCBCSSTTCBG
T ss_pred ccccceEEEeecccccchhhhcccccceehhhhhhhhhhHHHHhhhcccccccccccccccccccccccccccccccccc
Confidence 2 35789999999999999999999999999999999999999999999988887788887775 78999999999999
Q ss_pred cceEEEEEEEeCCCeEEEcccccccccccccchhhhhc-------cCCceeEEEEEEEEeEecC
Q 015664 269 RDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIG-------SEGTLGIITEVTLRLQKIP 325 (403)
Q Consensus 269 ~D~V~~levV~~dG~iv~~~~~~~~~~~g~dL~~~~~G-------s~GtlGIIT~~tLkl~p~p 325 (403)
+|+|+++|||++||++++++....++..++++++...| |+|+|||||+++||++|+|
T Consensus 173 ~d~v~~levVl~~G~iv~~~~~~~~~~~~~~~~~~~~G~~~~~l~SeGtlGIIt~~tlkl~P~P 236 (236)
T d1wvfa2 173 FMMQCGMEVVLANGDVYRTGMGGVPGSNTWQIFKWGYGPTLDGMFTQANYGICTKMGFWLMPKP 236 (236)
T ss_dssp GGGEEEEEEECTTSCEEECGGGGSTTCSCTTTCSCCSSCCCHHHHTTSSSCEEEEEEEECEECC
T ss_pred ccceeeeEEEcCCCcEEEeCCccCCCccHHHHHhcCcCccccccccccceEEEEEEEEEEEcCC
Confidence 99999999999999999987776666677777777666 8999999999999999987
No 2
>d1w1oa2 d.145.1.1 (A:40-245) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]}
Probab=100.00 E-value=1.9e-39 Score=298.82 Aligned_cols=194 Identities=16% Similarity=0.290 Sum_probs=176.1
Q ss_pred cCCCeeeChhhhhhccCCCCCcCcCCCCCcEEEEcCCHHHHHHHHHHHHhC---CCCeeeeCCCCCCCcccccCCCcEEE
Q 015664 123 CQDDMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKH---KVPIIPYGGATSIEGHTLSPNGGVCI 199 (403)
Q Consensus 123 lg~~v~~~~~~~~~~~~~~~s~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~---~~pv~~~GgG~s~~g~~~~~~~gvvI 199 (403)
+..++.+|+.....|..|+...+. ..|.+|++|+|++||+++|++|+++ ++|+.+||+||++.|.+.. +++|+|
T Consensus 4 ~~g~v~td~~~~~~~~~d~~~~~~--~~P~~Vv~P~s~~ev~~iv~~a~~~~~~~~~v~~rggGhs~~g~s~~-~~~ivi 80 (206)
T d1w1oa2 4 LDGKLRTDSNATAAASTDFGNITS--ALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFA-PGGVVV 80 (206)
T ss_dssp TTTCEECSHHHHHHTSCCTTCSCC--CCCSEEECCSSHHHHHHHHHHHHHCTTCCCCEEEESSCCCSSSTTCC-TTSEEE
T ss_pred CCcEEEcCHHHhhhhEECcccCcc--cCCCEEEEcCCHHHHHHHHHHHHhCCCCCeEEEEECCCCCcccCccc-CCCEee
Confidence 446799999999989888765533 6899999999999999999999997 6899999999999988765 578999
Q ss_pred EcCCCCCc-----EEeeecCcEEEEccCCCHHHHHHHHhcCCCeecCCCCc-cccccccccccccCCCccccccccceEE
Q 015664 200 DLSLMKSV-----KALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGP-GATIGGMCATRCSGSLAVRYGTMRDNVI 273 (403)
Q Consensus 200 dl~~mn~i-----~~id~~~~~v~VeaGv~~~~L~~~l~~~Gl~~p~~~~~-~~TvGG~ia~n~~G~~s~~yG~~~D~V~ 273 (403)
||++||+| +++|++..+++||||++|.||+++|.++|+.++..++. .+++||++++|++|..+.+||..+|+|+
T Consensus 81 dl~~l~~i~~~~~~~id~~~~~v~v~aG~~~~~l~~~l~~~Gl~~~~~~~~~~~tvGG~i~~~g~g~~s~~~G~~~d~v~ 160 (206)
T d1w1oa2 81 NMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNVL 160 (206)
T ss_dssp EGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTTEEESCCCSSCCSBHHHHHTTCCCSTTHHHHCCGGGSEE
T ss_pred eccccceeeeceeEEEecCCCEEEEEcceehhhhhhhhhccccccccCCccCceEEeeeeccccceeccccccceeeeee
Confidence 99999998 78999999999999999999999999999988766654 6999999999999999999999999999
Q ss_pred EEEEEeCCCeEEEcccccccccccccchhhhhccCCceeEEEEEEEEeEec
Q 015664 274 NLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKI 324 (403)
Q Consensus 274 ~levV~~dG~iv~~~~~~~~~~~g~dL~~~~~Gs~GtlGIIT~~tLkl~p~ 324 (403)
++|+|++||++++++.+ .++||||+++|++|+|||||+++||++|.
T Consensus 161 ~~evV~~~G~~~~~s~~-----~~~dl~~a~~g~~G~~Giit~~tl~l~PA 206 (206)
T d1w1oa2 161 EMDVITGHGEMVTCSKQ-----LNADLFDAVLGGLGQFGVITRARIAVEPA 206 (206)
T ss_dssp EEEEEETTSCEEEEESS-----SSHHHHHHHTTCTTCSEEEEEEEEEEEEC
T ss_pred EEEEEcCCCcEEEECCC-----CCHHHHHHHhhCCCccEeEEEEEEEEEcC
Confidence 99999999999988654 37899999999999999999999999984
No 3
>d1e8ga2 d.145.1.1 (A:6-273) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]}
Probab=100.00 E-value=7.6e-37 Score=292.20 Aligned_cols=211 Identities=25% Similarity=0.364 Sum_probs=164.4
Q ss_pred HHHHHHHHHhcCC-CeeeChhhhhhccCCCC----C-----c-CcCCCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeC
Q 015664 113 QELVDELKAICQD-DMTMDYEERYIHGKPQN----S-----F-HKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYG 181 (403)
Q Consensus 113 ~~~~~~L~~~lg~-~v~~~~~~~~~~~~~~~----s-----~-~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~G 181 (403)
++++++|++++|+ ++.++......+...+. + . ......|++||+|+|+|||+++|++|+++++||+++|
T Consensus 17 ~~~i~~L~~ilg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~g 96 (268)
T d1e8ga2 17 NEFIQDIIRIVGSENVEVISSKDQIVDGSYMKPTHTHDPTHVMDQDYFLASAIVAPRNVADVQSIVGLANKFSFPLWPIS 96 (268)
T ss_dssp HHHHHHHHHHHCGGGEEECC-----CCBCSSSBCSSSCSSCCSCTTSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEES
T ss_pred HHHHHHHHHHhCccceecchhHhhhhccccccccccccccccccccccCCCEEEeCCCHHHHHHHHHHHHHcCCCEEecc
Confidence 4689999999995 67776544333221111 0 0 0112359999999999999999999999999999999
Q ss_pred CCCCC--CcccccCCCcEEEEcCC-CCCcEEeeecCcEEEEccCCCHHHHHHHHhcCCCeecCCC---Cc-ccccccccc
Q 015664 182 GATSI--EGHTLSPNGGVCIDLSL-MKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDP---GP-GATIGGMCA 254 (403)
Q Consensus 182 gG~s~--~g~~~~~~~gvvIdl~~-mn~i~~id~~~~~v~VeaGv~~~~L~~~l~~~Gl~~p~~~---~~-~~TvGG~ia 254 (403)
+|++. .+...+.+++|+|||++ ||+|+++|+++.+++||||++|.+|+++|.++|+.+|..+ .. .+++||++.
T Consensus 97 ~G~~~~~~~~~~~~~~~ividls~~mn~i~~id~~~~~~~v~aGv~~~~l~~~l~~~G~~~~~~~~~~~~~~~~i~g~~~ 176 (268)
T d1e8ga2 97 IGRNSGYGGAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPGVTYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAV 176 (268)
T ss_dssp SCCCTTTTTTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHH
T ss_pred ccccccccccccccCCceeecchhhhhhhhhcccccchhhhhhhhhhHHHHHHHHHHhhhhcccccccccccceEeeeec
Confidence 88764 34555567899999974 9999999999999999999999999999999999876422 12 467788776
Q ss_pred ccccCCCccccccccceEEEEEEEeCCCeEEEcccccc-------------cccccccchhhh----------hccCCce
Q 015664 255 TRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRAR-------------KSAAGYDLTRLI----------IGSEGTL 311 (403)
Q Consensus 255 ~n~~G~~s~~yG~~~D~V~~levV~~dG~iv~~~~~~~-------------~~~~g~dL~~~~----------~Gs~Gtl 311 (403)
++ |..+.+||.++|+|+++|||++||++++++.... +...+|++.+++ +||||+|
T Consensus 177 ~~--G~~~~~yG~~~d~v~~~~vV~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~g~~l~~igSeGtl 254 (268)
T d1e8ga2 177 ER--GVGYTPYGDHWMMHSGMEVVLANGELLRTGMGALPDPKRPETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNM 254 (268)
T ss_dssp TT--CBCSSTTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCCGGGTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSS
T ss_pred cc--ccccccccchhcccccEEEEeCCCcEEEeCCccccchhhhhhccccccccccccHHHHhhcccCcccccCcccceE
Confidence 65 4446789999999999999999999998764432 234566666655 6899999
Q ss_pred eEEEEEEEEeEecC
Q 015664 312 GIITEVTLRLQKIP 325 (403)
Q Consensus 312 GIIT~~tLkl~p~p 325 (403)
||||++||||+|+|
T Consensus 255 GiIT~~tlrl~P~P 268 (268)
T d1e8ga2 255 GIVTKIGIWLMPNP 268 (268)
T ss_dssp EEEEEEEEECEECC
T ss_pred EEEEEEEEEEecCC
Confidence 99999999999987
No 4
>d1f0xa2 d.145.1.1 (A:9-273) D-lactate dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=99.97 E-value=4e-31 Score=251.72 Aligned_cols=206 Identities=19% Similarity=0.205 Sum_probs=167.8
Q ss_pred HHHHHHHHHhcCC-CeeeChhhhhhccCCCCCcCcCCCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCcccc
Q 015664 113 QELVDELKAICQD-DMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTL 191 (403)
Q Consensus 113 ~~~~~~L~~~lg~-~v~~~~~~~~~~~~~~~s~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~~~ 191 (403)
++++++|++++|+ +|.+|+.++..|++++. .++ +.|.+||+|+|++||+++|++|+++++|++++||||++.|+++
T Consensus 2 ~~ll~~L~~ivG~~~Vltd~~~~~~ys~d~s-~~~--~~p~aVV~P~s~~eV~~iv~~a~~~~~pv~~rGgGTsl~Gg~~ 78 (265)
T d1f0xa2 2 KAFLNELARLVGSSHLLTDPAKTARYRKGFR-SGQ--GDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGST 78 (265)
T ss_dssp HHHHHHHHHHHCGGGEECCHHHHHHHHBCSS-SCB--BCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTS
T ss_pred HHHHHHHHHhcCcccEEeCHHHHHHhhcccc-ccC--CCCCEEEeCCCHHHHHHHHHHHHhhccccceeccccccccccc
Confidence 6799999999995 79999999988988753 333 6899999999999999999999999999999999999999998
Q ss_pred cCCC-----cEEEEcCCCCCcEEeeecCcEEEEccCCCHHHHHHHHhcCCCeec-CCCC--ccccccccccccccCCCcc
Q 015664 192 SPNG-----GVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFP-LDPG--PGATIGGMCATRCSGSLAV 263 (403)
Q Consensus 192 ~~~~-----gvvIdl~~mn~i~~id~~~~~v~VeaGv~~~~L~~~l~~~Gl~~p-~~~~--~~~TvGG~ia~n~~G~~s~ 263 (403)
+..+ .+++|+++||+|++++ +++.++||||++|.+|+++|+++|++++ +++. ..+|+||++++|++|....
T Consensus 79 p~~g~~~~~~vv~~~~~m~~i~~~~-~~~~v~v~pGv~~~~L~~~l~~~g~~~~~~~~~s~~~atiGG~ia~na~G~~~~ 157 (265)
T d1f0xa2 79 PNGNDYDRDVVIISTLRLDKLHVLG-KGEQVLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQ 157 (265)
T ss_dssp CCBSCCSSCEEEEECTTCCCEEEET-TTTEEEECTTCBHHHHHHHHGGGTEECSCCCGGGGGTCBHHHHHHTTCCCSCTT
T ss_pred ccccccccceeeeeccccccceecc-cccceEEEeeeeHHHHHHHHHhcCCccccCCCcccccceeeeehhhCCCCcceE
Confidence 7543 3889999999997655 6788999999999999999999998754 3333 3699999999999999765
Q ss_pred ccccccceEEEEEEEeCCCeEEEccccc----------------------------------------cc--------cc
Q 015664 264 RYGTMRDNVINLKVVLANGDVVKTASRA----------------------------------------RK--------SA 295 (403)
Q Consensus 264 ~yG~~~D~V~~levV~~dG~iv~~~~~~----------------------------------------~~--------~~ 295 (403)
+ |.+.+++..+..|+.||++.....-. ++ .+
T Consensus 158 r-g~~~~~~~~~~~v~~~G~~~~~~~l~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~y~~~iR~v~~~~p~rfN 236 (265)
T d1f0xa2 158 R-GPAYTEMSLFARINEDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYN 236 (265)
T ss_dssp S-CSSCCSCEEEEEECTTSCEEEEECSSBCCCSSHHHHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCT
T ss_pred E-ccchhhhHHHhhhccCCceEEeccchhhhCCChHHHHHHHhhcccchhhhccchhhhhhhHHHHHhhccCCCCccccc
Confidence 5 66777778889999999986432110 00 01
Q ss_pred ccccchhhhhccCCceeEEEEEEEEeEec
Q 015664 296 AGYDLTRLIIGSEGTLGIITEVTLRLQKI 324 (403)
Q Consensus 296 ~g~dL~~~~~Gs~GtlGIIT~~tLkl~p~ 324 (403)
..+++.+.+.||+|+|.++ +++|+++|.
T Consensus 237 ~dp~~l~~~~GSeGtla~f-avr~d~~~~ 264 (265)
T d1f0xa2 237 ADPDRLFESSGCAGKLAVF-AVRLDTFEA 264 (265)
T ss_dssp TCGGGCCSSTTCTTSSEEE-EEEEECEEC
T ss_pred CCHHHHhcccCCcceeEEE-EEEccCcCC
Confidence 1233446678999999977 589999885
No 5
>d2i0ka2 d.145.1.1 (A:58-273) Cholesterol oxidase {Brevibacterium sterolicum [TaxId: 1702]}
Probab=99.97 E-value=2.4e-30 Score=238.66 Aligned_cols=171 Identities=17% Similarity=0.193 Sum_probs=148.4
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCcccccCCC-----cEEEEcCCCCCc-EEeeecCcEEEEcc
Q 015664 148 VNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNG-----GVCIDLSLMKSV-KALHIEDMDVVVEP 221 (403)
Q Consensus 148 ~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~~~~~~~-----gvvIdl~~mn~i-~~id~~~~~v~Vea 221 (403)
...|.+|++|+|+|||+++|++|+++++||+++|+||++.+.+.+... .++++|++|+.| +++|.++.+++|++
T Consensus 28 ~~~p~~v~~P~s~edV~~~V~~A~~~~~~v~~~G~Ghs~~g~~~~~~~~~~~~~~~~~l~~~~~i~~~~d~~~~~v~v~a 107 (216)
T d2i0ka2 28 MLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANVEKVILADTMTHLNGITVNTGGPVATVTAGA 107 (216)
T ss_dssp EEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCCTTEEEEECTTTSCCEEEECCSSSCEEEEET
T ss_pred ccCCCEEEeCCCHHHHHHHHHHHHhCCeeEEEEcCcccccCCccccccCcceEEEEEecccccccccccccccceEEEEe
Confidence 357999999999999999999999999999999999999887665432 356679999998 57788889999999
Q ss_pred CCCHHHHHHHHhcCCCeecCCCCc-cccccccccccccCCC----------ccccccccceEEEEEEEeCCCeEEEcccc
Q 015664 222 GIGWMELNEYLEPYGLFFPLDPGP-GATIGGMCATRCSGSL----------AVRYGTMRDNVINLKVVLANGDVVKTASR 290 (403)
Q Consensus 222 Gv~~~~L~~~l~~~Gl~~p~~~~~-~~TvGG~ia~n~~G~~----------s~~yG~~~D~V~~levV~~dG~iv~~~~~ 290 (403)
|++|.+|++++.++|+.++..+.. .+||||++++|++|.. +.+||.++|+|+++|||++||+++++...
T Consensus 108 G~~~~~l~~~l~~~g~~l~~~~~~~~~tigG~~~~~~~g~~~~~~gg~g~~~~~yG~~~d~v~~~~vV~~dG~i~~~~~~ 187 (216)
T d2i0ka2 108 GASIEAIVTELQKHDLGWANLPAPGVLSIGGALAVNAHGAALPAVGQTTLPGHTYGSLSNLVTELTAVVWNGTTYALETY 187 (216)
T ss_dssp TSBHHHHHHHHHHTTEECSSCCSCTTCBHHHHHHTTCCCSCCCCTTCCCCTTCCSSCGGGGEEEEEEEEECSSSEEEEEE
T ss_pred eechhhhhhhhhhcCcccccCCChhheeeccccCCCccCccccCCcccccccceecChHHeEEEEEEEeCCCCEEEecCc
Confidence 999999999999999999987765 5899999999988853 56899999999999999999999876543
Q ss_pred cccccccccchhhhhccCCceeEEEEEEEEeEe
Q 015664 291 ARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQK 323 (403)
Q Consensus 291 ~~~~~~g~dL~~~~~Gs~GtlGIIT~~tLkl~p 323 (403)
. ..|..+..+++++.+||||++|||+.|
T Consensus 188 ~-----~~d~~~~~~~~~~g~giit~~tl~~~P 215 (216)
T d2i0ka2 188 Q-----RNDPRITPLLTNLGRCFLTSVTMQAGP 215 (216)
T ss_dssp E-----TTSGGGHHHHSCTTSSCEEEEEEECEE
T ss_pred c-----CCCcchhhHHHcCCcEEEEEEEEEEcC
Confidence 2 236667777788889999999999988
No 6
>d1hska1 d.145.1.2 (A:15-208) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=99.95 E-value=8.5e-28 Score=218.64 Aligned_cols=191 Identities=17% Similarity=0.291 Sum_probs=156.4
Q ss_pred cHHHHHHHHHhcCC-CeeeChhhhhhccCCCCCcCcCCCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCccc
Q 015664 112 PQELVDELKAICQD-DMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHT 190 (403)
Q Consensus 112 ~~~~~~~L~~~lg~-~v~~~~~~~~~~~~~~~s~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~~ 190 (403)
+++++++|++++++ ++..++ +.. .+++ +++++.++++++|+|++||++++++|+++++|++++|+|||+....
T Consensus 1 ~~~~~~~l~~~l~~~~i~~~~-~L~----~~tt-~~vGG~a~~~v~p~s~~el~~~~~~a~~~~ip~~v~G~GSNll~~d 74 (194)
T d1hska1 1 NKDIYQALQQLIPNEKIKVDE-PLK----RYTY-TKTGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIRE 74 (194)
T ss_dssp CHHHHHHHHHHSCGGGEEEEE-EGG----GTCT-TSCCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECT
T ss_pred CHHHHHHHHhhcCcccEEeCC-cch----hccE-eeeCeEEEEEEecCCHHHHHHHHHHhhhcccceEEeccccccccCC
Confidence 36899999999985 565542 222 2233 4788999999999999999999999999999999999999985332
Q ss_pred ccCCCcEEEEcCCCCCcEEeeecCcEEEEccCCCHHHHHHHHhcCCCe-ecCCCCccccccccccccccCCCcccccc-c
Q 015664 191 LSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLF-FPLDPGPGATIGGMCATRCSGSLAVRYGT-M 268 (403)
Q Consensus 191 ~~~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~~~L~~~l~~~Gl~-~p~~~~~~~TvGG~ia~n~~G~~s~~yG~-~ 268 (403)
.. -.|++|++.+++.+ +.++..++|++|+.|.+|.+++.++|+. ++...++++||||+++|| ++.||. +
T Consensus 75 ~~-~~g~vi~l~~~~~~---~~~~~~v~~~aG~~~~~l~~~~~~~gl~g~e~~~gipgtvGGai~mN-----aG~yG~ei 145 (194)
T d1hska1 75 GG-IRGIVISLLSLDHI---EVSDDAIIAGSGAAIIDVSRVARDYALTGLEFACGIPGSIGGAVYMN-----AGAYGGEV 145 (194)
T ss_dssp TC-EEEEEEECTTCCCE---EEETTEEEEETTSBHHHHHHHHHHTTEESCGGGTTCCSBHHHHHHHT-----CEETTEEH
T ss_pred CC-ceeEEEEeeccccc---cccCCeEEEEeccchHHHHHHHHhhccccccccCCcceeehhhhhcc-----CcccCceE
Confidence 21 23789999988875 3466789999999999999999999998 677778899999999999 456897 9
Q ss_pred cceEEEEEEEeCCCeEEEcccccccccccccchhhhhccCCceeEEEEEEEEeEe
Q 015664 269 RDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQK 323 (403)
Q Consensus 269 ~D~V~~levV~~dG~iv~~~~~~~~~~~g~dL~~~~~Gs~GtlGIIT~~tLkl~p 323 (403)
.|+|.+++++++||++++...+ +..++|+...+-.+ ..||++++|||.|
T Consensus 146 ~d~v~~v~~v~~~G~i~~l~~~--e~~f~YR~s~~~~~----~~iIl~a~f~L~P 194 (194)
T d1hska1 146 KDCIDYALCVNEQGSLIKLTTK--ELELDYRNSIIQKE----HLVVLEAAFTLAP 194 (194)
T ss_dssp HHHEEEEEEECTTSCEEEEETT--TTTCBTTBCHHHHT----TCEEEEEEEECEE
T ss_pred EEEEEEEEEEcCCCCEEEEEHH--HccccCCCCCCCCC----CEEEEEEEEEEEC
Confidence 9999999999999999998764 45678876554332 2499999999988
No 7
>d1uxya1 d.145.1.2 (A:3-200) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.91 E-value=3.4e-24 Score=195.14 Aligned_cols=174 Identities=18% Similarity=0.174 Sum_probs=145.1
Q ss_pred CCCcCcCCCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCcccccCC---CcEEEEcCCCCCcEEeeecCcEE
Q 015664 141 QNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPN---GGVCIDLSLMKSVKALHIEDMDV 217 (403)
Q Consensus 141 ~~s~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~~~~~~---~gvvIdl~~mn~i~~id~~~~~v 217 (403)
+++| ++++.++.++.|+|++|+++++++|+++++|+++.|+|||+. ..+ +++++++.++.++. .+.++.++
T Consensus 6 ~~t~-~igG~A~~~~~p~s~edl~~~l~~~~~~~~p~~vlG~GSNlL----~~d~~~~~vi~~~~~~~~~~-~~~~~~~v 79 (198)
T d1uxya1 6 WNTF-GIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVL----FLEDYRGTVIINRIKGIEIH-DEPDAWYL 79 (198)
T ss_dssp GSTT-CCCCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEE----ECSCEEEEEEEECCCCEEEE-ECSSEEEE
T ss_pred cccC-CcCeEeeEEEEECCHHHHHHHHHHHHHcCCCEEEEecccccc----ccccccCcccccccccceee-ecccceEE
Confidence 3444 899999999999999999999999999999999999999983 333 35667777777664 35567789
Q ss_pred EEccCCCHHHHHHHHhcCCCe-ecCCCCccccccccccccccCCCcccccc-ccceEEEEEEEe-CCCeEEEcccccccc
Q 015664 218 VVEPGIGWMELNEYLEPYGLF-FPLDPGPGATIGGMCATRCSGSLAVRYGT-MRDNVINLKVVL-ANGDVVKTASRARKS 294 (403)
Q Consensus 218 ~VeaGv~~~~L~~~l~~~Gl~-~p~~~~~~~TvGG~ia~n~~G~~s~~yG~-~~D~V~~levV~-~dG~iv~~~~~~~~~ 294 (403)
+|++|+.|.+|.+++.++|+. ++...++|+||||++.|| ++.||. +.|.|.++++++ .||++++...+ +.
T Consensus 80 ~vgAG~~~~~l~~~~~~~gl~G~E~l~gIPGtvGGai~mN-----aG~~g~ei~~~l~~V~~v~~~~G~~~~~~~~--e~ 152 (198)
T d1uxya1 80 HVGAGENWHRLVKYTLQEGMPGLENLALIPGCVGSSPIQN-----IGAYGVELQRVCAYVDSVELATGKQVRLTAK--EC 152 (198)
T ss_dssp EEETTSBHHHHHHHHHHTTCCSCGGGTTCCSBGGGTTTTT-----CEETTEEGGGTEEEEEEEETTTTEEEEEETG--GG
T ss_pred EEecccchHHHHHHHHHcCCccchhhcccccccchhhhhc-----ccccccchhhceeeeEEEecCCCcEEEEecc--cc
Confidence 999999999999999999998 899999999999999999 567887 999999999987 88999987664 45
Q ss_pred cccccchhhhhccCCceeEEEEEEEEeEecCCcc
Q 015664 295 AAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHS 328 (403)
Q Consensus 295 ~~g~dL~~~~~Gs~GtlGIIT~~tLkl~p~p~~~ 328 (403)
.++|+-. .|.+.++..+|||+++|||.|.|+..
T Consensus 153 ~f~YR~S-~f~~~~~~~~iIl~a~f~L~~~~~~~ 185 (198)
T d1uxya1 153 RFGYRDS-IFKHEYQDRFAIVAVGLRLPKEWQPV 185 (198)
T ss_dssp TCBTTBC-GGGTTTTTTEEEEEEEEEEESSCCCC
T ss_pred ceecccc-cccccCCCCEEEEEEEEEECCCCCcc
Confidence 5677643 23445566789999999999887653
No 8
>d1f0xa1 d.58.32.2 (A:274-567) D-lactate dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=98.05 E-value=1.1e-08 Score=96.75 Aligned_cols=85 Identities=14% Similarity=-0.015 Sum_probs=29.6
Q ss_pred ccccccccceEEEEEEEeCC-CeEEEcccccccccccccchhhhhccCCceeEEEEEEEEeEecCCccEEEEEeCCCHHH
Q 015664 262 AVRYGTMRDNVINLKVVLAN-GDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTIKD 340 (403)
Q Consensus 262 s~~yG~~~D~V~~levV~~d-G~iv~~~~~~~~~~~g~dL~~~~~Gs~GtlGIIT~~tLkl~p~p~~~~~~~~~f~~~~~ 340 (403)
..+||.++++|++.++++|+ |++++.+....+..+|||.+ +++|++||+|++|.++||+.|.+.......+.+...+.
T Consensus 13 ~~~l~~iR~~vL~~~~~LP~sGE~~h~~~~~~~~~~G~dt~-l~IgseGT~~i~t~~~lK~~~~~~~~~~~~~~~~~~d~ 91 (294)
T d1f0xa1 13 PEVLTEIRRHILANFENLPVAGEYMHRDIYDIAEKYGKDTF-LMIDKLGTDKMPFFFNLKGRTDAMLEKVKFFRPHFTDR 91 (294)
T ss_dssp HHHHHHHHHHHHHHCSSCCSEEEEEEHHHHHHHC----------------------------------------------
T ss_pred HHHHHHHHHHHHhccccCCcceeeeccchhHHHHHHhHHHH-HHHHHhcccchHHHHHHHhhhhHHHhHhhhccccchHH
Confidence 67999999999999999996 99999877777888899965 88999999999999999998876655444444444444
Q ss_pred HHHHHHH
Q 015664 341 AADVAIA 347 (403)
Q Consensus 341 a~~~~~~ 347 (403)
+.+.+..
T Consensus 92 ~~~~~~~ 98 (294)
T d1f0xa1 92 AMQKFGH 98 (294)
T ss_dssp -------
T ss_pred HHHHHHH
Confidence 4444433
No 9
>d1ffvc2 d.145.1.3 (C:1-177) Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain {Hydrogenophaga pseudoflava [TaxId: 47421]}
Probab=97.01 E-value=0.00065 Score=58.57 Aligned_cols=103 Identities=18% Similarity=0.086 Sum_probs=68.4
Q ss_pred CcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCcccc--cCCCcEEEEcCCCCCcEEeeecCcEEEEccCCCHHHH
Q 015664 151 PDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTL--SPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMEL 228 (403)
Q Consensus 151 P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~~~--~~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~~~L 228 (403)
|--+++|+|.+|+.++++-.+. ...+.+|||.+....- ...-..+||+++...+..++.+++.+++++++++.++
T Consensus 5 ~f~~~~P~sl~Ea~~ll~~~~~---~a~~laGGTdl~~~~~~~~~~~~~lidl~~i~eL~~I~~~~~~l~IGA~~t~~~l 81 (177)
T d1ffvc2 5 RFEYHAPKSVGEAVALLGQLGS---DAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREEGSTVVIGAMTVENDL 81 (177)
T ss_dssp CCEEECCSSHHHHHHHHHHHGG---GEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEEETTEEEEETTCBHHHH
T ss_pred CceEECCCCHHHHHHHHHhcCC---CCEEEEeCchhHhhhhhcccCcccccCcccccccceEeecCceEEEeccEEHHHH
Confidence 4568899999998887654322 3678999998731100 0123589999987666556667888999999999999
Q ss_pred HHHHhcCCCeec---------CCCCc--cccccccccccc
Q 015664 229 NEYLEPYGLFFP---------LDPGP--GATIGGMCATRC 257 (403)
Q Consensus 229 ~~~l~~~Gl~~p---------~~~~~--~~TvGG~ia~n~ 257 (403)
.+.-.-. ..+| ..+.+ .+|+||++++..
T Consensus 82 ~~~~~~~-~~~~~l~~a~~~~as~qIRn~aTiGGni~~~~ 120 (177)
T d1ffvc2 82 ISSPIVQ-ARLPLLAEAAKLIADPQVRNRGTIGGDIAHGD 120 (177)
T ss_dssp HHCHHHH-HHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCC
T ss_pred HhCcccc-hHHHHHHHHHhccCChhheEEEEeccceeecc
Confidence 6532111 0111 12222 499999998864
No 10
>d1v97a6 d.145.1.3 (A:192-414) Xanthine oxidase, domain 3 (?) {Cow (Bos taurus) [TaxId: 9913]}
Probab=96.88 E-value=0.00038 Score=62.35 Aligned_cols=78 Identities=10% Similarity=-0.029 Sum_probs=56.6
Q ss_pred cEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCcc--cccCCCcEEEEcCCCCCcEEeeecCcEEEEccCCCHHHHH
Q 015664 152 DIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGH--TLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELN 229 (403)
Q Consensus 152 ~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~--~~~~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~~~L~ 229 (403)
.-.++|+|.+|+.++++- ++ ...+.+|||.+.-. .-.....++||++++..+..|+.++..+++++++++.++.
T Consensus 43 ~~w~~P~sl~ea~~ll~~---~~-~a~~vaGGTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~ 118 (223)
T d1v97a6 43 VTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACALSSVE 118 (223)
T ss_dssp CEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGTCEEECSSEEEEETTCBHHHHH
T ss_pred EEEECCCCHHHHHHHHHh---CC-CCEEEEecchHHHHHhcccCCCCeEEEcccccccCeeEecCceEEEcccccHHHHH
Confidence 467799999998887653 33 25678999986211 0011236899999877665666778889999999999998
Q ss_pred HHHh
Q 015664 230 EYLE 233 (403)
Q Consensus 230 ~~l~ 233 (403)
+.+.
T Consensus 119 ~~l~ 122 (223)
T d1v97a6 119 KTLL 122 (223)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8754
No 11
>d1jroa4 d.145.1.3 (A:179-345) Xanthine dehydrogenase chain A, domain 3 {Rhodobacter capsulatus [TaxId: 1061]}
Probab=96.73 E-value=0.00033 Score=60.01 Aligned_cols=98 Identities=17% Similarity=0.120 Sum_probs=65.5
Q ss_pred EcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCcccc--cCCCcEEEEcCCCCCcEEeeecCcEEEEccCCCHHHHHHHHh
Q 015664 156 FPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTL--SPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLE 233 (403)
Q Consensus 156 ~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~~~--~~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~~~L~~~l~ 233 (403)
.|+|.+|+.++++- +. ...+.+|||.+.-..- ......+||+++++++..+..+++.+++++++++.++.+.+.
T Consensus 4 ~P~tl~e~~~l~~~---~p-~a~~vaGGTdl~~~~~~~~~~~~~~idl~~i~eL~~i~~~~~~l~IGA~vt~~~l~~~~~ 79 (167)
T d1jroa4 4 LPETSDALADWYLA---HP-EATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPDGYGIGAGVTIAALRAFAE 79 (167)
T ss_dssp CCSSHHHHHHHHHH---CT-TCEEESSCTTTHHHHHTSCCCCCSEEEGGGCGGGSCEEEETTEEEEETTCBHHHHHHHHT
T ss_pred CcccHHHHHHHHHH---CC-CCEEEEcCChHHHHhhccccCCCceEeecccccceeEEeeccccccccchhHHHHHHhhh
Confidence 69999998777663 32 3567899998731100 012357899998776655666778899999999999988765
Q ss_pred cCCCeec----C--CCCc--cccccccccccc
Q 015664 234 PYGLFFP----L--DPGP--GATIGGMCATRC 257 (403)
Q Consensus 234 ~~Gl~~p----~--~~~~--~~TvGG~ia~n~ 257 (403)
++--.+. . ++.. .+|+||++++..
T Consensus 80 ~~~p~L~~a~~~ia~~qIRn~aTiGGNl~~a~ 111 (167)
T d1jroa4 80 GPHPALAGLLRRFASEQVRQVATIGGNIANGS 111 (167)
T ss_dssp TTCHHHHHHHHTSSCHHHHTTCBHHHHHHHCC
T ss_pred hhHHHHHHHHHhhcCHhhheeeEeccceeecc
Confidence 4311111 0 1111 499999998764
No 12
>d1n62c2 d.145.1.3 (C:1-177) Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]}
Probab=96.20 E-value=0.0022 Score=55.12 Aligned_cols=104 Identities=20% Similarity=0.099 Sum_probs=69.0
Q ss_pred CcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCccc--ccCCCcEEEEcCCCCCcEEeeecCcEEEEccCCCHHHH
Q 015664 151 PDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHT--LSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMEL 228 (403)
Q Consensus 151 P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~~--~~~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~~~L 228 (403)
+--+++|+|.+|+.++++-.. -...+.+|||.+...- -......+||+++++.+..+..++..++++++++..++
T Consensus 5 ~f~y~~P~sl~ea~~ll~~~~---~~a~~laGGT~l~~~~~~~~~~~~~lidl~~i~el~~I~~~~~~~~iGa~~t~~~~ 81 (177)
T d1n62c2 5 SFDYHRPKSIADAVALLTKLG---EDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIREEGTDVVIGAMTTQHAL 81 (177)
T ss_dssp CCEEECCSSHHHHHHHHHHHG---GGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEEETTEEEEETTCBHHHH
T ss_pred CcceeCCCCHHHHHHHHHhcC---CCCeEEEecCchhhhhhhccCCccccccccccccceEEeecCceEEEeccccHHHh
Confidence 456789999999888764432 2467899999863110 00123589999988877667778888999999999998
Q ss_pred HHH--HhcCCCe----ecC--CCCc--cccccccccccc
Q 015664 229 NEY--LEPYGLF----FPL--DPGP--GATIGGMCATRC 257 (403)
Q Consensus 229 ~~~--l~~~Gl~----~p~--~~~~--~~TvGG~ia~n~ 257 (403)
.+. +.++--. +.. .+.+ .+||||++++..
T Consensus 82 ~~~~~~~~~~p~l~~a~~~~as~qIRn~aTiGGNi~~a~ 120 (177)
T d1n62c2 82 IGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGD 120 (177)
T ss_dssp HHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCC
T ss_pred hccHhHhhhccHHHHHhhhcCChhHeEEEEeecceeccc
Confidence 742 2222111 111 1111 499999998774
No 13
>d1t3qc2 d.145.1.3 (C:1-176) Quinoline 2-oxidoreductase medium subunit QorM {Pseudomonas putida [TaxId: 303]}
Probab=95.07 E-value=0.021 Score=48.57 Aligned_cols=104 Identities=13% Similarity=-0.018 Sum_probs=67.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCcc--cccCCCcEEEEcCCCCCcEEeeecCcEEEEccCCCHHH
Q 015664 150 IPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGH--TLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWME 227 (403)
Q Consensus 150 ~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~--~~~~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~~~ 227 (403)
.+--+++|+|.+|+.++++- ++ ...+.+|||.+.-. .-......+||++++..+..+..++..+++++++++.+
T Consensus 4 ~~f~y~~P~sl~ea~~ll~~---~~-~a~~vaGGTdl~~~~~~~~~~p~~lIdl~~i~eL~~i~~~~~~l~IGa~vt~~~ 79 (176)
T d1t3qc2 4 PAFSYRAPASLQEVIQVLAD---DP-DARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQSAGILSVGAMVTHFR 79 (176)
T ss_dssp CCCEEECCSSHHHHHHHHHH---CT-TCEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEEETTEEEEETTCBHHH
T ss_pred CCceeeCCCCHHHHHHHHHh---CC-CCEEEecCCchhhhhhhhccCcccccCcccccccceeeecCcceeeccchhhHH
Confidence 34467899999999887753 32 25678999976210 00113468999998877666677788899999999999
Q ss_pred HHHHH--hcCCCe----ecC--CCCc--cccccccccccc
Q 015664 228 LNEYL--EPYGLF----FPL--DPGP--GATIGGMCATRC 257 (403)
Q Consensus 228 L~~~l--~~~Gl~----~p~--~~~~--~~TvGG~ia~n~ 257 (403)
+...- .++--. +.. .+.. .+||||++++..
T Consensus 80 l~~~~~~~~~~p~l~~a~~~ias~qIRn~aTiGGNi~~a~ 119 (176)
T d1t3qc2 80 NKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHAD 119 (176)
T ss_dssp HHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTC
T ss_pred HHHHhhhhhhhhHHHHHHHhcCCcceEEEEeecCcceecc
Confidence 86421 111000 000 1111 499999998764
No 14
>d1rm6b2 d.145.1.3 (B:1-216) 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, N-terminal domain {Thauera aromatica [TaxId: 59405]}
Probab=94.25 E-value=0.039 Score=48.49 Aligned_cols=100 Identities=15% Similarity=0.185 Sum_probs=64.2
Q ss_pred cEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCCccc--ccCCCcEEEEcCCCCCcEEeee-cCcEEEEccCCCHHHH
Q 015664 152 DIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHT--LSPNGGVCIDLSLMKSVKALHI-EDMDVVVEPGIGWMEL 228 (403)
Q Consensus 152 ~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~g~~--~~~~~gvvIdl~~mn~i~~id~-~~~~v~VeaGv~~~~L 228 (403)
--+++|+|.+|+.+++. ++ +-.+.+|||.+...- -...-..+||++++.++..|.. +++.+++++++++.+|
T Consensus 7 F~y~~P~sl~EA~~ll~---~~--~a~~lAGGTdL~~~~k~~~~~p~~lIdl~~I~eL~~I~~~~dg~l~IGA~vT~~~l 81 (216)
T d1rm6b2 7 FRTHRPATLADAVNALA---AE--ATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLADGSLRIGAGATLEAI 81 (216)
T ss_dssp CEEECCSSHHHHHHHTT---ST--TEEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTCEEECTTSCEEEETTCBHHHH
T ss_pred ceEeCCCCHHHHHHHhc---CC--CCeEEECCccHHHHHhccccCccceechhhhhhhhccccccCCcEEEeeeeehHHh
Confidence 36789999999877752 33 457889999862110 0012368999998766555543 4557999999999999
Q ss_pred HH--HHhcC--CCe--ec--CCCCc--ccccccccccc
Q 015664 229 NE--YLEPY--GLF--FP--LDPGP--GATIGGMCATR 256 (403)
Q Consensus 229 ~~--~l~~~--Gl~--~p--~~~~~--~~TvGG~ia~n 256 (403)
.+ .+.++ .+. .. ..+.+ .+||||+++++
T Consensus 82 ~~~~~l~~~~p~L~~a~~~~as~qIRN~aTiGGNl~~~ 119 (216)
T d1rm6b2 82 AEHDAIRTTWPALAQAAESVAGPTHRAAATLGGNLCQD 119 (216)
T ss_dssp HHCHHHHHHSHHHHHHHHHSSCHHHHHHCBHHHHHTCC
T ss_pred hhhhhhhhhhHHHHHHHHHHCCHHHhCCeecccccccC
Confidence 75 33331 111 01 11111 49999999875
No 15
>d1wvfa1 d.58.32.1 (A:243-521) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]}
Probab=89.90 E-value=0.22 Score=44.48 Aligned_cols=65 Identities=14% Similarity=0.057 Sum_probs=45.6
Q ss_pred EEEEEeCCCH---HHHHHHHHHHHHcCCCceEEEecCHHHHHHHHHhhCCC-------CCC-------------CCceEE
Q 015664 329 VVATCNFPTI---KDAADVAIATMLSGIQVSRVELLDEVQVRAVNIANGKN-------LPE-------------LPTLMF 385 (403)
Q Consensus 329 ~~~~~~f~~~---~~a~~~~~~i~~~~~~~~~~e~~D~~~~~~~~~~~~~~-------~p~-------------~~~l~~ 385 (403)
..+++.|++. .+++++++.++++++.|..+|++|...+..++...... +|. .+.+++
T Consensus 4 ~~~~v~f~~~~Dl~~aV~~lr~L~~~gi~p~~~e~~d~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~w~l~~ 83 (279)
T d1wvfa1 4 KPFEVIFEDEADIVEIVDALRPLRMSNTIPNSVVIASTLWEAGSAHLTRAQYTTEPGHTPDSVIKQMQKDTGMGAWNLYA 83 (279)
T ss_dssp EEEEEEECCGGGHHHHHHHHHHHHHTTSSCSCEEEEEHHHHHHHTTCCGGGTCCCSSSCCHHHHHHHHHHHCCCSEEEEE
T ss_pred EEEEEEecCHHHHHHHHHHHHHHHHcCCCcceeEecCHHHHHHHHhccccccccCCCCCCHHHHHHHHHHhCCCceeEEE
Confidence 3456788865 45666777778899999999999999887776543221 221 125889
Q ss_pred EEcCChhh
Q 015664 386 EFIGTREM 393 (403)
Q Consensus 386 e~~g~~~~ 393 (403)
++.|+++.
T Consensus 84 ~l~G~~~~ 91 (279)
T d1wvfa1 84 ALYGTQEQ 91 (279)
T ss_dssp EEEESHHH
T ss_pred EeecCHHH
Confidence 99998764
No 16
>d1e8ga1 d.58.32.1 (A:274-560) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]}
Probab=85.92 E-value=0.0078 Score=54.71 Aligned_cols=87 Identities=14% Similarity=0.100 Sum_probs=49.1
Q ss_pred cccchhhhhccCCceeEEEEEEEEeEe--cCCccEEEEEeCCCHHHHHHHHHHHHHcCCCceEEEecCHHHHHHHHHhhC
Q 015664 297 GYDLTRLIIGSEGTLGIITEVTLRLQK--IPQHSVVATCNFPTIKDAADVAIATMLSGIQVSRVELLDEVQVRAVNIANG 374 (403)
Q Consensus 297 g~dL~~~~~Gs~GtlGIIT~~tLkl~p--~p~~~~~~~~~f~~~~~a~~~~~~i~~~~~~~~~~e~~D~~~~~~~~~~~~ 374 (403)
|||++.++.+++|+||+||+++.+|.+ ..+........+ .+.+..... ...+...+.++...+..+....+
T Consensus 2 gy~~~~l~~~seg~Lg~~ve~~~~L~~~~~~~~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~ 74 (287)
T d1e8ga1 2 GYQSYLITLPKDGDLKQAVDIIRPLRLGMALQNVPTIRHIL--LDAAVLGDK-----RSYSSRTEPLSDEELDKIAKQLN 74 (287)
T ss_dssp CEEEEEEEECSTTHHHHHHHHHHHHHHTTSSCSCCEEEEHH--HHHHHHCCG-----GGTCCCSSCCCHHHHHHHHHHHT
T ss_pred CcceEEEeCCCccHHHHHHHHHHHHHhccCCcceEEEecch--HHHHHHHhH-----HHHhhcCCCCCHHHHHHHHHhcC
Confidence 899999999999999999999855544 344333332221 111111111 11233334455555544443332
Q ss_pred CCCCCCCceEEEEcCChhh
Q 015664 375 KNLPELPTLMFEFIGTREM 393 (403)
Q Consensus 375 ~~~p~~~~l~~e~~g~~~~ 393 (403)
.. .+.++++++|+++.
T Consensus 75 ~~---~~~~~~~l~G~~~~ 90 (287)
T d1e8ga1 75 LG---RWNFYGALYGPEPI 90 (287)
T ss_dssp CC---SEEEEEEEESCHHH
T ss_pred cc---hhheeeecccCHHH
Confidence 22 35788899998664
No 17
>d1l0ba2 c.15.1.3 (A:1705-1801) Breast cancer associated protein, BRCA1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=72.12 E-value=3 Score=31.14 Aligned_cols=71 Identities=10% Similarity=0.140 Sum_probs=38.3
Q ss_pred cceeecCCCCCCcHHHHHHHHHhcCCCeeeChhhhhhccCCCCCcCcCCCCCcEEEEcCCHHHHHHHHHHHHhCCCCeee
Q 015664 100 TEYVVKGSHKEIPQELVDELKAICQDDMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIP 179 (403)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~L~~~lg~~v~~~~~~~~~~~~~~~s~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~ 179 (403)
.+.+-.+.++.|+.+-++.|-+.+|..|+-+..... + +.+..|..||.|....|....-.+++.++.|++-
T Consensus 5 ~~icc~gpFt~mt~d~Le~mv~lCGAsVvk~~~~l~-~--------~~~~~~viVvqpda~t~~~~~~~i~~~~~~~vVt 75 (97)
T d1l0ba2 5 LQIYCCEPFTNMPKDELERMLQLCGASVVKELPLLT-R--------DTGAHPIVLVQPSAWTEDNDCPDIGQLCKGRLVM 75 (97)
T ss_dssp CEEEECSCCSSSCHHHHHHHHHHTTCEEECSSSCGG-G--------CCSSCCEEEEC-------------------CEEE
T ss_pred ceEEEEccccCCCHHHHHHHHHHcCceeecChhhcC-C--------CCCCeeEEEEcCCccccccccHHHHHhccccEEe
Confidence 455667888999999999999999998766543321 1 2235788999999888888877888888888864
No 18
>d2o1ra1 d.145.1.4 (A:1-78) Hypothetical protein HI0107 {Haemophilus influenzae [TaxId: 727]}
Probab=42.00 E-value=24 Score=24.41 Aligned_cols=40 Identities=13% Similarity=0.248 Sum_probs=31.2
Q ss_pred cCcEEEEccCCCHHHHHHHHhcCCCeecCCCCccccccccccccc
Q 015664 213 EDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGATIGGMCATRC 257 (403)
Q Consensus 213 ~~~~v~VeaGv~~~~L~~~l~~~Gl~~p~~~~~~~TvGG~ia~n~ 257 (403)
.++...|.+.+.+.+|++.+ |+.+|-+ ..-|+||++...-
T Consensus 4 ~Dg~~~v~G~~~l~dl~~~l---~~~l~~~--~~~Ti~G~v~~~l 43 (78)
T d2o1ra1 4 SDGSMIIDGSANLRDLNKMF---NWELDTE--DARTFNGLILEHL 43 (78)
T ss_dssp TTSCEEEETTCBHHHHHHHH---CCCCCCS--SCSBHHHHHHHHC
T ss_pred cCCEEEEEeeCCHHHHHHHH---CCCCCCc--cchHHHHHHHHHh
Confidence 45678899999999999997 4556643 3579999997763
No 19
>d2p13a1 d.145.1.4 (A:431-515) Uncharacterized protein NE2227 {Nitrosomonas europaea [TaxId: 915]}
Probab=32.49 E-value=16 Score=25.89 Aligned_cols=41 Identities=17% Similarity=0.093 Sum_probs=31.7
Q ss_pred cCcEEEEccCCCHHHHHHHHhcCCCeecCCCCcccccccccccc
Q 015664 213 EDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGATIGGMCATR 256 (403)
Q Consensus 213 ~~~~v~VeaGv~~~~L~~~l~~~Gl~~p~~~~~~~TvGG~ia~n 256 (403)
.++...|.+.+.+.+|++.+. +.+|......-|+||++..-
T Consensus 9 ~dg~~~v~G~~~l~dl~~~l~---~~l~~e~~~~~TlgG~i~~~ 49 (85)
T d2p13a1 9 ADGTWLMDGWISIRKASNLLE---HDLVDEAERYSTLGGYLLWQ 49 (85)
T ss_dssp TTSCEEEETTSBHHHHHHHHT---SCCCCTTCCCCBHHHHHHHH
T ss_pred CCCeEEEEecCCHHHHHHHHC---CCCCCccccceEHHHHHHHH
Confidence 456688999999999999874 55655444568999999766
No 20
>d2plia1 d.145.1.4 (A:5-88) Uncharacterized protein NMB0537 {Neisseria meningitidis [TaxId: 487]}
Probab=32.23 E-value=52 Score=22.93 Aligned_cols=40 Identities=15% Similarity=0.310 Sum_probs=31.5
Q ss_pred cCcEEEEccCCCHHHHHHHHhcCCCeecCCCCccccccccccccc
Q 015664 213 EDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGATIGGMCATRC 257 (403)
Q Consensus 213 ~~~~v~VeaGv~~~~L~~~l~~~Gl~~p~~~~~~~TvGG~ia~n~ 257 (403)
.++...|.+.+.+.+|++.+ |+.+|-. ..-|+||++...-
T Consensus 9 ~~~~~~v~g~~~l~dl~~~~---~~~l~~~--~~~TigG~i~~~l 48 (84)
T d2plia1 9 SSERWRIHAATEIEDINTFF---GTEYSSE--EADTIGGLVIQEL 48 (84)
T ss_dssp ETTEEEEETTCBHHHHHHHH---CCCCCCS--SCCBHHHHHHHHH
T ss_pred CCCEEEEEecCCHHHHHHHh---CCCCCcc--ccHHHHHHHHHHh
Confidence 45678899999999999998 4566643 3579999998763
No 21
>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=29.48 E-value=47 Score=25.11 Aligned_cols=77 Identities=14% Similarity=0.224 Sum_probs=49.1
Q ss_pred CCCcHHHHHHHHHhcCCCe-eeChhhhhhccC-CCCCcCcCCCCCcEEEEcCCHHHHHHHHHHHHhCCCC-eeeeCCCCC
Q 015664 109 KEIPQELVDELKAICQDDM-TMDYEERYIHGK-PQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVP-IIPYGGATS 185 (403)
Q Consensus 109 ~~~~~~~~~~L~~~lg~~v-~~~~~~~~~~~~-~~~s~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~p-v~~~GgG~s 185 (403)
..+...+++.|++-...+| .+.+......+. -+.+...+...|+.++.-...+.+.++++.|.+.|++ +++..+|-+
T Consensus 21 ~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~dlp~~vDlvvi~vp~~~~~~~~~~~~~~g~~~~vi~s~Gf~ 100 (129)
T d2csua1 21 KKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAIIVVPKRFVKDTLIQCGEKGVKGVVIITAGFG 100 (129)
T ss_dssp TSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEECSCHHHHHHHHHHHHHHTCCEEEECCCSST
T ss_pred CCcHHHHHHHHHHcCCCcEEEeccCccccCCeEeecchhhcCCCCceEEEecChHHhHHHHHHHHHcCCCEEEEeccccc
Confidence 3444567777765322343 334433333332 1234444557899999999999999999999999988 445555533
No 22
>d1rlka_ c.131.1.1 (A:) Hypothetical protein TA0108 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=27.22 E-value=40 Score=25.41 Aligned_cols=38 Identities=16% Similarity=0.084 Sum_probs=31.2
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHhCCCCee-eeCCCCC
Q 015664 148 VNIPDIIVFPRSEDEVSKIVKCCDKHKVPII-PYGGATS 185 (403)
Q Consensus 148 ~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~-~~GgG~s 185 (403)
.+.+..|+...+++++.++.+.|.+.+++.. ++-.|+.
T Consensus 48 ~g~~KIvl~v~~e~~L~~l~~~a~~~~l~~~~v~DAG~T 86 (116)
T d1rlka_ 48 EGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYT 86 (116)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred CCceEEEEEeCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 3577899999999999999999999999874 4444443
No 23
>d1q7sa_ c.131.1.1 (A:) Bit1 (Cgi-147) {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.82 E-value=45 Score=25.11 Aligned_cols=31 Identities=10% Similarity=0.231 Sum_probs=27.9
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHhCCCCee
Q 015664 148 VNIPDIIVFPRSEDEVSKIVKCCDKHKVPII 178 (403)
Q Consensus 148 ~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~ 178 (403)
.+.+..|+...+++++.++.+.|.+++++..
T Consensus 49 ~g~~KIvl~v~~e~~l~~l~~~a~~~~l~~~ 79 (117)
T d1q7sa_ 49 CGQPKVVVKAPDEETLIALLAHAKMLGLTVS 79 (117)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHTTCCEE
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHCCCCEE
Confidence 4678999999999999999999999998853
No 24
>d2p4pa1 d.145.1.4 (A:1-82) Hypothetical protein HD1797 {Haemophilus ducreyi [TaxId: 730]}
Probab=25.54 E-value=55 Score=22.60 Aligned_cols=41 Identities=12% Similarity=0.078 Sum_probs=29.9
Q ss_pred cCcEEEEccCCCHHHHHHHHhcCCCeecCCCCcccccccccccc
Q 015664 213 EDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGATIGGMCATR 256 (403)
Q Consensus 213 ~~~~v~VeaGv~~~~L~~~l~~~Gl~~p~~~~~~~TvGG~ia~n 256 (403)
++++..|.+-+.+.++++++. +.++......-|+||.+..-
T Consensus 4 dd~~~~v~g~~~l~d~~~~~~---~~~~~~~~~~~TlgG~i~~~ 44 (82)
T d2p4pa1 4 NEDSWLIDGATPLEDVMRALN---IHTFPRDENYETIGGFMMYM 44 (82)
T ss_dssp CCSEEEEETTSBHHHHHHHTT---CCCSCCSCSSCBHHHHHHHH
T ss_pred cCCEEEEEeeCCHHHHHHHhC---CCCCCcccCccCHHHHHHHH
Confidence 567788999999999999864 33322223357999999766
No 25
>d2plsa1 d.145.1.4 (A:345-428) Hypothetical protein CT0541 {Chlorobium tepidum [TaxId: 1097]}
Probab=25.54 E-value=67 Score=22.17 Aligned_cols=43 Identities=23% Similarity=0.074 Sum_probs=31.6
Q ss_pred ecCcEEEEccCCCHHHHHHHHhcCCCeecCCCC--ccccccccccccc
Q 015664 212 IEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPG--PGATIGGMCATRC 257 (403)
Q Consensus 212 ~~~~~v~VeaGv~~~~L~~~l~~~Gl~~p~~~~--~~~TvGG~ia~n~ 257 (403)
.+++...|.+-+.+.+|++++. +.+|...- ..-|+||++..-.
T Consensus 4 ~~dg~~~v~G~~~l~dl~~~l~---~~~~~~~e~~~~~Tl~G~i~~~l 48 (84)
T d2plsa1 4 REDGSWLLDGLIAVPELKDTLG---LRAVPEEEKGVYHTLSGMIMWLL 48 (84)
T ss_dssp CTTSCEEEETTCBHHHHHHHHT---CSCCTTTTSCSCCBHHHHHHHHH
T ss_pred ecCCeEEEEccCCHHHHHHHHC---CCCCcccccccccCHHHHHHHHh
Confidence 3667788999999999999874 44444332 2479999997763
No 26
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.83 E-value=29 Score=23.54 Aligned_cols=46 Identities=15% Similarity=0.236 Sum_probs=31.9
Q ss_pred cchhhhhccCCceeEEEEEEEEeEecCCccEEEEEeCCCHHHHHHHHHHH
Q 015664 299 DLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTIKDAADVAIAT 348 (403)
Q Consensus 299 dL~~~~~Gs~GtlGIIT~~tLkl~p~p~~~~~~~~~f~~~~~a~~~~~~i 348 (403)
+|..+|. .+|-|.++.+...+.........+.|.+.++|..++..+
T Consensus 16 ~l~~~F~----~~G~v~~~~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l 61 (78)
T d1no8a_ 16 DIQELFA----EFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQY 61 (78)
T ss_dssp HHHHHHH----HHSCEEEEEESCSSCCCSCCEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHH----HhCCCeEEEEEEeeccccceeEEEEECCHHHHHHHHHHh
Confidence 5655553 457888888765444344457788999999998887653
No 27
>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}
Probab=24.65 E-value=1.1e+02 Score=22.32 Aligned_cols=90 Identities=17% Similarity=0.183 Sum_probs=55.8
Q ss_pred CCcHHHHHHHHHhcCCCee-eChhhhhhccCC-CCCcCcCCCCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCCCCCC
Q 015664 110 EIPQELVDELKAICQDDMT-MDYEERYIHGKP-QNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIE 187 (403)
Q Consensus 110 ~~~~~~~~~L~~~lg~~v~-~~~~~~~~~~~~-~~s~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG~s~~ 187 (403)
......+..|.+. |-+|. +.+......+.. +.+...+...|+.++.-...+.+.++++.|.+.+++.+
T Consensus 15 k~g~~v~~~L~~~-g~~V~pVnP~~~~i~G~~~y~sl~~lp~~~D~vvi~vp~~~~~~~l~~~~~~g~k~v--------- 84 (116)
T d1y81a1 15 KYGNIILKDLLSK-GFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVVPPKVGLQVAKEAVEAGFKKL--------- 84 (116)
T ss_dssp SHHHHHHHHHHHT-TCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEECSCHHHHHHHHHHHHHTTCCEE---------
T ss_pred CcHHHHHHHHHHC-CCEEEEEccccccccCccccccchhccccceEEEEEeCHHHHHHHHHHHHhcCCceE---------
Confidence 3445567777652 32332 233222222211 22333455689999999999999999999988665543
Q ss_pred cccccCCCcEEEEcCCCCCcEEeeecCcEEEEccCCCHHHHHHHHhcCCCee
Q 015664 188 GHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFF 239 (403)
Q Consensus 188 g~~~~~~~gvvIdl~~mn~i~~id~~~~~v~VeaGv~~~~L~~~l~~~Gl~~ 239 (403)
+.++|..-.++.+.++++|+.+
T Consensus 85 ------------------------------~~~~g~~~~~~~~~a~~~gi~v 106 (116)
T d1y81a1 85 ------------------------------WFQPGAESEEIRRFLEKAGVEY 106 (116)
T ss_dssp ------------------------------EECTTSCCHHHHHHHHHHTCEE
T ss_pred ------------------------------EeccchhhHHHHHHHHHcCCEE
Confidence 2345555667888888888764
No 28
>d1umdb1 c.36.1.7 (B:2-187) Branched-chain alpha-keto acid dehydrogenase, Pyr module {Thermus thermophilus [TaxId: 274]}
Probab=24.44 E-value=33 Score=27.80 Aligned_cols=29 Identities=10% Similarity=0.146 Sum_probs=26.7
Q ss_pred cEEEEcCCHHHHHHHHHHHHhCCCCeeee
Q 015664 152 DIIVFPRSEDEVSKIVKCCDKHKVPIIPY 180 (403)
Q Consensus 152 ~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~ 180 (403)
.-|+.|.+.+|+..+++.|-+.+-|+.++
T Consensus 142 l~V~~Ps~~~d~~~~l~~a~~~~~Pv~i~ 170 (186)
T d1umdb1 142 LKVVAVSTPYDAKGLLKAAIRDEDPVVFL 170 (186)
T ss_dssp CEEEECCSHHHHHHHHHHHHHCSSCEEEE
T ss_pred eeeeecCCHHHHHHHHHHHHhCCCcEEEE
Confidence 46999999999999999999999999886
No 29
>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}
Probab=22.60 E-value=27 Score=26.71 Aligned_cols=35 Identities=23% Similarity=0.374 Sum_probs=30.4
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHhCCCCeeeeCCC
Q 015664 149 NIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGA 183 (403)
Q Consensus 149 ~~P~~Vv~P~s~eeV~~iv~~a~~~~~pv~~~GgG 183 (403)
..|++|+.-.+.+-+.+.+++|.++++|+++=-.|
T Consensus 40 ~~~DVvIDFS~p~~~~~~l~~~~~~~~p~ViGTTG 74 (128)
T d1vm6a3 40 DSPDVVIDFSSPEALPKTVDLCKKYRAGLVLGTTA 74 (128)
T ss_dssp SCCSEEEECSCGGGHHHHHHHHHHHTCEEEECCCS
T ss_pred ccCCEEEEecCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 46899999999999999999999999998764444
No 30
>d2r2za1 d.145.1.4 (A:5-88) Putative hemolysin EF0700 {Enterococcus faecalis [TaxId: 1351]}
Probab=22.58 E-value=66 Score=22.24 Aligned_cols=39 Identities=23% Similarity=0.214 Sum_probs=30.2
Q ss_pred cCcEEEEccCCCHHHHHHHHhcCCCeecCCCCcccccccccccc
Q 015664 213 EDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGATIGGMCATR 256 (403)
Q Consensus 213 ~~~~v~VeaGv~~~~L~~~l~~~Gl~~p~~~~~~~TvGG~ia~n 256 (403)
+++...|.+-+.+.++++.+. +.+|-+ ..-|+||++...
T Consensus 7 ~~~~~~v~G~~~l~dl~~~l~---~~l~~~--~~~TigG~i~~~ 45 (84)
T d2r2za1 7 ADNEYLVQGRMLIDEFNEVFE---TDLHMS--DVDTMAGYLITA 45 (84)
T ss_dssp ETTEEEEETTSBHHHHHHHHT---CCCCCT--TCCBHHHHHHHH
T ss_pred CCCEEEEEeeCCHHHHHHHHC---cCCCCc--cchhHHHHHHHH
Confidence 456788999999999999874 556532 357999999765
No 31
>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=22.33 E-value=52 Score=22.14 Aligned_cols=29 Identities=21% Similarity=0.158 Sum_probs=25.0
Q ss_pred eeecCcEEEEccCCCHHHHHHHHhcCCCe
Q 015664 210 LHIEDMDVVVEPGIGWMELNEYLEPYGLF 238 (403)
Q Consensus 210 id~~~~~v~VeaGv~~~~L~~~l~~~Gl~ 238 (403)
+|...+.++|+.-+...+|.+.+++.|+.
T Consensus 38 vdl~~~~v~V~~~~~~~~i~~~I~~~G~~ 66 (72)
T d1qupa2 38 FDIEQQIMSVESSVAPSTIINTLRNCGKD 66 (72)
T ss_dssp EETTTTEEEEEESSCHHHHHHHHHHTTCC
T ss_pred EECCCCEEEEEeeCCHHHHHHHHHHhCCC
Confidence 56677788888889999999999999985
No 32
>d1jaka1 c.1.8.6 (A:151-506) beta-N-acetylhexosaminidase {Streptomyces plicatus [TaxId: 1922]}
Probab=22.20 E-value=22 Score=32.05 Aligned_cols=28 Identities=14% Similarity=0.293 Sum_probs=23.4
Q ss_pred CCHHHHHHHHHHHHhCCCCeeee--CCCCC
Q 015664 158 RSEDEVSKIVKCCDKHKVPIIPY--GGATS 185 (403)
Q Consensus 158 ~s~eeV~~iv~~a~~~~~pv~~~--GgG~s 185 (403)
=|.+|+++|+++|++++|.|+|- .=||+
T Consensus 72 yT~~di~~iv~ya~~rgI~viPEid~PgH~ 101 (356)
T d1jaka1 72 YTKAEYKEIVRYAASRHLEVVPEIDMPGHT 101 (356)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEECCCSSSC
T ss_pred cCHHHHHHHHHHHHHcCCeEeecCCCcchh
Confidence 57899999999999999999984 33554
No 33
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.17 E-value=62 Score=22.37 Aligned_cols=40 Identities=20% Similarity=0.193 Sum_probs=28.5
Q ss_pred CceeEEEEEEEEeEecCCc----cEEEEEeCCCHHHHHHHHHHH
Q 015664 309 GTLGIITEVTLRLQKIPQH----SVVATCNFPTIKDAADVAIAT 348 (403)
Q Consensus 309 GtlGIIT~~tLkl~p~p~~----~~~~~~~f~~~~~a~~~~~~i 348 (403)
+.+|-|.++.+...+.... .....+.|.+.++|.+++..+
T Consensus 33 ~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~l 76 (89)
T d2cpia1 33 GKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCV 76 (89)
T ss_dssp TTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHH
T ss_pred cccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHh
Confidence 5678999988765443221 245678999999998888664
No 34
>d1f0xa1 d.58.32.2 (A:274-567) D-lactate dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=21.95 E-value=52 Score=28.48 Aligned_cols=68 Identities=12% Similarity=0.022 Sum_probs=31.8
Q ss_pred cEEEEEeCCCHHHHHHHHHHHHH-cCCCceEEEecCHHHHHHHHHhhCCCCCCCCceEEEEcCChhhHhhhhcc
Q 015664 328 SVVATCNFPTIKDAADVAIATML-SGIQVSRVELLDEVQVRAVNIANGKNLPELPTLMFEFIGTREMISLFAFN 400 (403)
Q Consensus 328 ~~~~~~~f~~~~~a~~~~~~i~~-~~~~~~~~e~~D~~~~~~~~~~~~~~~p~~~~l~~e~~g~~~~~~~~~~~ 400 (403)
..++++..++.....+..+.++. ...-|.+.|+|++..+.....+... -.+++..+|+...+.++.++
T Consensus 3 ~~vfyigtn~~~~l~~iR~~vL~~~~~LP~sGE~~h~~~~~~~~~~G~d-----t~l~IgseGT~~i~t~~~lK 71 (294)
T d1f0xa1 3 QQVFYIGTNQPEVLTEIRRHILANFENLPVAGEYMHRDIYDIAEKYGKD-----TFLMIDKLGTDKMPFFFNLK 71 (294)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHCSSCCSEEEEEEHHHHHHHC------------------------------
T ss_pred ceEEEEeCCCHHHHHHHHHHHHhccccCCcceeeeccchhHHHHHHhHH-----HHHHHHHhcccchHHHHHHH
Confidence 46788888988877777766664 4456788999998776554433221 14666777776666666555
No 35
>d2rk5a1 d.145.1.4 (A:5-88) Putative hemolysin SMU1693 {Streptococcus mutans [TaxId: 1309]}
Probab=21.38 E-value=34 Score=23.79 Aligned_cols=39 Identities=28% Similarity=0.302 Sum_probs=30.7
Q ss_pred cCcEEEEccCCCHHHHHHHHhcCCCeecCCCCcccccccccccc
Q 015664 213 EDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGATIGGMCATR 256 (403)
Q Consensus 213 ~~~~v~VeaGv~~~~L~~~l~~~Gl~~p~~~~~~~TvGG~ia~n 256 (403)
+++...|.+-+.+.++++++. +.+|.+ ..-|+||++...
T Consensus 4 ~d~~~~v~G~~~l~dl~~~l~---~~l~~~--~~dTlgG~v~~~ 42 (84)
T d2rk5a1 4 ADNTYIVLGTMTLNDFNEYFE---TDLESD--NVDTIAGFYLTG 42 (84)
T ss_dssp ETTEEEEETTSBHHHHHHHHT---CCCCCT--TCCBHHHHHHHH
T ss_pred cCCEEEEEeeeEHHHHHHHhC---CCcccc--cchhHHHHHHHH
Confidence 456788999999999999984 556543 347999999766
No 36
>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.88 E-value=49 Score=22.34 Aligned_cols=30 Identities=17% Similarity=0.071 Sum_probs=25.6
Q ss_pred EeeecCcEEEEccCCCHHHHHHHHhcCCCe
Q 015664 209 ALHIEDMDVVVEPGIGWMELNEYLEPYGLF 238 (403)
Q Consensus 209 ~id~~~~~v~VeaGv~~~~L~~~l~~~Gl~ 238 (403)
++|....+++|+.-+...+|.+.+++.|+.
T Consensus 36 ~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~ 65 (72)
T d1cc8a_ 36 DISLEKQLVDVYTTLPYDFILEKIKKTGKE 65 (72)
T ss_dssp EEETTTTEEEEEESSCHHHHHHHHHTTSSC
T ss_pred EEECCCCEEEEeecCCHHHHHHHHHHHCCc
Confidence 355667888999999999999999999975
No 37
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.60 E-value=66 Score=22.72 Aligned_cols=45 Identities=9% Similarity=0.126 Sum_probs=30.1
Q ss_pred cchhhhhccCCceeEEEEEEEEeEecCCccEEEEEeCCCHHHHHHHHHH
Q 015664 299 DLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTIKDAADVAIA 347 (403)
Q Consensus 299 dL~~~~~Gs~GtlGIIT~~tLkl~p~p~~~~~~~~~f~~~~~a~~~~~~ 347 (403)
+|..+| +.+|-|..+.+.............+.|.+.++|.+++..
T Consensus 34 ~L~~~F----~~~G~i~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~ 78 (101)
T d1x5oa1 34 ELENML----KPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGH 78 (101)
T ss_dssp HHHHTT----TTTSCEEEEEEEECSSSCEEEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHH----hhcccccceeeecccccccccceeEEeCCHHHHHHHHHH
Confidence 565554 345677777665544334445678899999999888765
No 38
>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]}
Probab=20.57 E-value=52 Score=21.77 Aligned_cols=30 Identities=17% Similarity=0.162 Sum_probs=25.5
Q ss_pred EeeecCcEEEEccCCCHHHHHHHHhcCCCe
Q 015664 209 ALHIEDMDVVVEPGIGWMELNEYLEPYGLF 238 (403)
Q Consensus 209 ~id~~~~~v~VeaGv~~~~L~~~l~~~Gl~ 238 (403)
.+|...+.++|+.-+...+|.+.+++.|+.
T Consensus 31 ~v~~~~~~v~V~~~~~~~~i~~~I~~~Gy~ 60 (66)
T d1fe0a_ 31 DIDLPNKKVCIESEHSMDTLLATLKKTGKT 60 (66)
T ss_dssp EEETTTTEEEEEESSCHHHHHHHHHTTTSC
T ss_pred EEEcCCCEEEEEeeCCHHHHHHHHHHhCCe
Confidence 356677788888889999999999999986
No 39
>d1yhta1 c.1.8.6 (A:16-359) Dispersin B, DspB {Actinobacillus actinomycetemcomitans [TaxId: 714]}
Probab=20.28 E-value=25 Score=31.24 Aligned_cols=28 Identities=14% Similarity=0.170 Sum_probs=23.2
Q ss_pred CCHHHHHHHHHHHHhCCCCeeee--CCCCC
Q 015664 158 RSEDEVSKIVKCCDKHKVPIIPY--GGATS 185 (403)
Q Consensus 158 ~s~eeV~~iv~~a~~~~~pv~~~--GgG~s 185 (403)
-|.+|+++++++|+++++.|+|- .=||.
T Consensus 77 yt~~e~~~lv~yA~~rgI~viPeiD~PGH~ 106 (344)
T d1yhta1 77 LSYRQLDDIKAYAKAKGIELIPELDSPNHM 106 (344)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEEEESSSC
T ss_pred cCHHHHHHHHHHHHHcCCEEEeccchhhHH
Confidence 38899999999999999999874 34554
Done!