Query 015666
Match_columns 403
No_of_seqs 281 out of 2473
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 16:34:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015666.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015666hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hqi_A Speckle-type POZ protei 100.0 4.9E-55 1.7E-59 413.6 31.7 302 14-338 2-312 (312)
2 3htm_A Speckle-type POZ protei 100.0 1.3E-30 4.5E-35 224.6 15.7 161 164-338 12-172 (172)
3 3hve_A Gigaxonin; ubiquitin, c 100.0 4.4E-29 1.5E-33 228.9 11.2 169 170-355 15-185 (256)
4 3i3n_A Kelch-like protein 11; 100.0 2.2E-28 7.4E-33 227.1 10.9 161 170-344 16-185 (279)
5 4eoz_A Speckle-type POZ protei 100.0 1.3E-28 4.3E-33 206.0 8.4 142 165-318 4-145 (145)
6 3ivv_A Speckle-type POZ protei 99.9 3E-24 1E-28 179.2 12.5 132 15-155 7-144 (145)
7 2if5_A Zinc finger and BTB dom 99.9 3E-24 1E-28 173.3 10.1 111 170-292 9-119 (120)
8 1r29_A B-cell lymphoma 6 prote 99.9 9.5E-24 3.2E-28 172.2 10.7 113 169-294 12-125 (127)
9 2vkp_A BTB/POZ domain-containi 99.9 1.8E-23 6.2E-28 165.7 10.1 103 180-295 2-108 (109)
10 2z8h_A Transcription regulator 99.9 7.2E-24 2.5E-28 175.4 7.3 119 168-300 18-137 (138)
11 3b84_A Zinc finger and BTB dom 99.9 2.4E-23 8.3E-28 167.6 9.2 108 171-294 9-116 (119)
12 4gjh_A TNF receptor-associated 99.9 3.4E-23 1.2E-27 178.6 10.5 137 15-155 20-174 (178)
13 4ghu_A TNF receptor-associated 99.9 2.6E-23 8.8E-28 181.7 9.8 138 16-155 37-188 (198)
14 2ppi_A Gigaxonin; BTB domain, 99.9 2.7E-23 9.3E-28 173.0 9.0 111 170-292 31-143 (144)
15 1buo_A POZ domain, protein (pr 99.9 6.5E-23 2.2E-27 165.7 10.3 109 170-295 12-120 (121)
16 2yy9_A Zinc finger and BTB dom 99.9 3.9E-23 1.3E-27 170.2 8.8 114 170-299 9-122 (135)
17 2vpk_A Myoneurin; transcriptio 99.9 9.4E-23 3.2E-27 163.5 10.8 107 171-293 7-115 (116)
18 2foj_A Ubiquitin carboxyl-term 99.9 2.6E-22 8.9E-27 169.4 12.5 125 17-155 17-149 (155)
19 1lb6_A TNF receptor-associated 99.9 2.5E-22 8.4E-27 170.4 10.8 135 17-155 3-157 (160)
20 2q81_A MIZ-1 protein; BTB/POZ 99.9 3.3E-22 1.1E-26 160.9 8.6 107 170-293 11-117 (119)
21 2ihc_A Transcription regulator 99.9 3.3E-23 1.1E-27 168.1 1.7 112 168-293 11-123 (124)
22 3ohu_A Transcription regulator 99.9 6.3E-23 2.2E-27 166.8 2.9 109 170-292 16-125 (125)
23 3ga1_A Nucleus accumbens-assoc 99.9 2E-22 6.9E-27 164.7 5.5 110 170-295 17-127 (129)
24 1ca9_A TRAF2, protein (TNF rec 99.9 6.3E-22 2.2E-26 172.9 8.5 135 16-155 40-191 (192)
25 2gkw_A TNF receptor-associated 99.9 4.1E-22 1.4E-26 173.8 7.3 135 17-155 38-188 (192)
26 1d00_A Tumor necrosis factor r 99.9 1.3E-21 4.4E-26 167.4 9.4 135 16-155 16-167 (168)
27 1flk_A TNF receptor associated 99.8 2.2E-21 7.4E-26 173.6 8.0 136 16-155 73-224 (228)
28 3fkc_A Transcriptional regulat 99.8 2.6E-20 8.9E-25 149.0 10.7 101 170-286 15-115 (116)
29 3m5b_A Zinc finger and BTB dom 99.8 1.1E-20 3.8E-25 151.6 6.1 102 170-294 16-117 (119)
30 2f1z_A Ubiquitin carboxyl-term 99.7 8.7E-18 3E-22 169.1 11.2 125 17-155 29-161 (522)
31 2ast_A S-phase kinase-associat 99.4 1.4E-12 4.6E-17 109.7 10.4 125 189-314 3-147 (159)
32 4ajy_C Transcription elongatio 99.1 1.7E-10 5.7E-15 88.4 8.3 83 189-281 4-97 (97)
33 4gwm_A Meprin A subunit beta; 99.1 6.1E-10 2.1E-14 111.3 12.4 133 14-155 401-567 (592)
34 1fs1_B SKP1, cyclin A/CDK2-ass 99.0 1.1E-09 3.8E-14 89.8 9.7 110 189-303 4-128 (141)
35 2p1m_A SKP1-like protein 1A; F 98.8 1.1E-09 3.8E-14 91.8 2.2 119 189-311 6-143 (160)
36 3drz_A BTB/POZ domain-containi 98.4 9.1E-07 3.1E-11 68.6 9.2 95 188-294 7-106 (107)
37 1hv2_A Elongin C, ELC1; protei 98.4 1.1E-06 3.7E-11 67.1 8.1 92 188-281 5-99 (99)
38 3v7d_A Suppressor of kinetocho 98.3 2.9E-06 9.9E-11 71.4 10.5 119 188-307 8-147 (169)
39 2fnj_C Transcription elongatio 98.3 6.4E-07 2.2E-11 68.0 5.0 91 189-281 3-96 (96)
40 1vcb_B Protein (elongin C); tu 98.0 1.5E-05 5.1E-10 62.1 6.6 92 188-281 18-112 (112)
41 2eqx_A Kelch repeat and BTB do 97.9 9.4E-06 3.2E-10 62.7 3.9 59 293-356 5-63 (105)
42 3drx_A BTB/POZ domain-containi 97.5 0.00016 5.4E-09 61.8 6.8 95 188-294 13-112 (202)
43 3kvt_A Potassium channel prote 96.0 0.0017 5.7E-08 50.6 1.0 95 188-294 6-104 (115)
44 1s1g_A Potassium voltage-gated 95.6 0.015 5E-07 45.8 4.9 91 187-292 13-109 (124)
45 1t1d_A Protein (potassium chan 95.1 0.014 4.8E-07 44.1 3.3 85 189-285 3-90 (100)
46 2nz0_B Potassium voltage-gated 94.7 0.03 1E-06 45.0 4.3 84 186-284 34-121 (140)
47 1nn7_A Potassium channel KV4.2 94.3 0.015 5.2E-07 44.4 1.7 81 189-284 2-86 (105)
48 2eqx_A Kelch repeat and BTB do 79.5 1.4 4.8E-05 33.1 3.3 32 264-295 8-39 (105)
49 2vkp_A BTB/POZ domain-containi 78.9 1.1 3.8E-05 33.6 2.6 30 296-325 77-106 (109)
50 2yy9_A Zinc finger and BTB dom 72.9 2.6 8.8E-05 33.1 3.3 34 296-331 87-120 (135)
51 2z8h_A Transcription regulator 71.9 2.5 8.6E-05 33.3 3.0 33 296-330 101-133 (138)
52 2q81_A MIZ-1 protein; BTB/POZ 71.4 3.9 0.00013 31.2 4.0 30 296-325 88-117 (119)
53 2r9r_B Paddle chimera voltage 70.4 3.9 0.00013 40.2 4.7 86 188-285 53-141 (514)
54 1r29_A B-cell lymphoma 6 prote 70.4 4.3 0.00015 31.3 4.1 30 296-325 95-124 (127)
55 2vpk_A Myoneurin; transcriptio 69.3 4.7 0.00016 30.5 4.0 30 296-325 86-115 (116)
56 3b84_A Zinc finger and BTB dom 67.9 3.9 0.00013 31.2 3.3 30 296-325 86-115 (119)
57 2if5_A Zinc finger and BTB dom 66.8 6.3 0.00022 29.9 4.3 29 296-324 91-119 (120)
58 3htm_A Speckle-type POZ protei 63.3 3.9 0.00013 33.3 2.6 31 266-296 134-164 (172)
59 1buo_A POZ domain, protein (pr 62.4 6.8 0.00023 29.8 3.7 30 296-325 89-118 (121)
60 2ppi_A Gigaxonin; BTB domain, 61.7 5.1 0.00017 31.8 3.0 29 296-324 115-143 (144)
61 3v0r_A Major allergen ALT A 1; 56.1 2.4 8E-05 32.9 -0.0 29 17-47 10-38 (133)
62 3m5b_A Zinc finger and BTB dom 54.9 11 0.00036 28.8 3.6 30 296-325 87-116 (119)
63 4eoz_A Speckle-type POZ protei 49.2 9 0.00031 30.0 2.5 30 296-325 91-120 (145)
64 3hqi_A Speckle-type POZ protei 48.0 14 0.00048 33.3 3.9 28 298-325 242-269 (312)
65 3ga1_A Nucleus accumbens-assoc 40.5 5 0.00017 31.0 -0.4 31 295-325 95-125 (129)
66 3hve_A Gigaxonin; ubiquitin, c 38.5 37 0.0013 29.4 5.0 30 296-325 99-128 (256)
67 2plx_B Peptide inhibitor; heli 37.0 37 0.0013 17.5 2.6 22 303-324 3-24 (26)
68 2ast_A S-phase kinase-associat 35.6 40 0.0014 27.0 4.4 60 264-325 49-123 (159)
69 2ihc_A Transcription regulator 31.8 3.6 0.00012 31.6 -2.5 30 296-325 94-123 (124)
70 3i3n_A Kelch-like protein 11; 29.5 26 0.00089 30.9 2.4 30 266-295 141-170 (279)
71 1fs1_B SKP1, cyclin A/CDK2-ass 28.9 76 0.0026 24.8 4.9 60 264-325 44-118 (141)
No 1
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=100.00 E-value=4.9e-55 Score=413.57 Aligned_cols=302 Identities=32% Similarity=0.572 Sum_probs=249.0
Q ss_pred eeeeeeEEEEEEcCccccccCCCCCeeecccceecCe---eEEEEEEcCCCCCCCCCceEEEEEEec-cCCcceEEEEEE
Q 015666 14 NETVNGSHQFTVKGYSLAKGMGPGKCLSSDVFTVGGY---DWAIYFYPDGKNPEDGALYVSVFIALA-SEGTDVRALFEL 89 (403)
Q Consensus 14 ~~~~~~~~~w~I~~fs~~~~~~~~~~~~S~~F~~~g~---~W~l~~~p~g~~~~~~~~~lslyL~~~-~~~~~v~~~~~~ 89 (403)
+++..++|.|+|.||+.++ .+.|+++.||.|.+||+ +|+|.+||||++..+++ |+|+||.|. .+.|++.|+|++
T Consensus 2 s~~~~~~~~w~I~nfs~~~-~~~~~~i~S~~F~~gg~~~~~W~i~~yP~G~~~~~~~-~lslyL~~~~~~~~~v~a~~~~ 79 (312)
T 3hqi_A 2 SKVVKFSYMWTINNFSFCR-EEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKD-YLSLYLLLVSCPKSEVRAKFKF 79 (312)
T ss_dssp EEEEEEEEEEEETTGGGCC-CCTTCCEECCCBCC--CCCCEEEEEEETTCCC--CTT-EEEEEEEEEECCC-CEEEEEEE
T ss_pred CceEEEEEEEEEcCcchhh-hcCCCeEeeCCcccCCCCCceEEEEEECCCCCccCCC-cEEEEEEEcCCCCCcEEEEEEE
Confidence 4577899999999999987 46789999999999995 99999999998766666 999999997 468999999999
Q ss_pred EEeeCCCCCccceecccccccccCCccccccCccCccceeeccccc--cCcccCCCcEEEEEEeeeeccccC---CCCCc
Q 015666 90 TLVDQSGKGKHKVHSHFDRALESGPYTLKYRGSMGYKRFFKRTSLE--TSDYIKDDCLLINCTVGVVRNRLE---GPKQY 164 (403)
Q Consensus 90 ~ll~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~fi~~~~L~--~~~~l~dd~l~i~~~v~i~~~~~~---~~~~~ 164 (403)
.|+|++|+........ ..+.|.....+||.+||+|++|+ .+||+.||+++|+|+|.|..+... .+...
T Consensus 80 ~l~~~~~~~~~~~~~~-------~~~~F~~~~~wG~~~Fi~~~~L~~~~~~yl~dD~l~i~~~v~v~~~~~~~~~~~~~~ 152 (312)
T 3hqi_A 80 SILNAKGEETKAMESQ-------RAYRFVQGKDWGFKKFIRRGFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMN 152 (312)
T ss_dssp EEECTTSCEEEEEECS-------SCEEECTTCEEEEEEEEEHHHHTCGGGCCCGGGCEEEEEEEEEEEECCCEECCCCCS
T ss_pred EEEeCCCCcccccccC-------CceeCCCCCCcCHHHhccHHHhhccccCeecCCEEEEEEEEEEEecccccccccccc
Confidence 9999998653222111 13344322223999999999995 568999999999999999864322 22334
Q ss_pred ccCCCCCchHHHHHHHhhcCCCCceEEEeCCceeeeehhhhhhcCHHHHHHhcccccCCCCCcEEEcCCCHHHHHHHHHH
Q 015666 165 SIPVPPSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLF 244 (403)
Q Consensus 165 ~~~~~~~~l~~~l~~~~~~~~~~Dv~~~v~~~~~~aHk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~d~~~~~f~~~L~~ 244 (403)
.+.+|++.+.+++.+++.++.++||+|.|+|++|+|||.|||++||||++||.+++.|+...+|.|+++++++|+.+|+|
T Consensus 153 ~~~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~ 232 (312)
T 3hqi_A 153 MVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCF 232 (312)
T ss_dssp SCCCCCCCHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSCHHHHHHHHHH
T ss_pred ccCCCCchHHHHHHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCCHHHHHHHHHh
Confidence 57789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCcccccCCCCccccHHHHHHHHHHhcccChhhHHHHHHHHHHccCChhhHHHHHHHHHhCCChHHHHHHHHHh
Q 015666 245 IYTDKFPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEELNAETVATTLALAEQHQCPQLKAICLKFA 324 (403)
Q Consensus 245 iYt~~~~~~~~~~~~~~~~~~~~~~~~ll~~Ad~~~~~~L~~~c~~~L~~~l~~~n~~~~l~~A~~~~~~~L~~~~~~~i 324 (403)
+|++.++. ..+++.+||.+|++|+++.|+..|+++|.+.++.+|+..++.+|+.|++..|++.|++||
T Consensus 233 iYt~~~~~------------~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i 300 (312)
T 3hqi_A 233 IYTGKAPN------------LDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFI 300 (312)
T ss_dssp HHHSCCTT------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hcCCCCCC------------hHHHHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99999884 458999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCChHHHHcccc
Q 015666 325 ATPANLGVIMQSEG 338 (403)
Q Consensus 325 ~~~~~~~~~~~~~~ 338 (403)
. .|+.+++.+++
T Consensus 301 ~--~~~~~v~~s~g 312 (312)
T 3hqi_A 301 N--YHATDVLETSG 312 (312)
T ss_dssp H--HTC--------
T ss_pred H--HHHHHHhhCCC
Confidence 9 99999887753
No 2
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.97 E-value=1.3e-30 Score=224.58 Aligned_cols=161 Identities=39% Similarity=0.628 Sum_probs=146.4
Q ss_pred cccCCCCCchHHHHHHHhhcCCCCceEEEeCCceeeeehhhhhhcCHHHHHHhcccccCCCCCcEEEcCCCHHHHHHHHH
Q 015666 164 YSIPVPPSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLL 243 (403)
Q Consensus 164 ~~~~~~~~~l~~~l~~~~~~~~~~Dv~~~v~~~~~~aHk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~d~~~~~f~~~L~ 243 (403)
..+..|++.+..++.+++.++.++||+|.++|++|+|||.||+++|+||++||.+++.|+....|.++++++++|+.+|+
T Consensus 12 ~~~~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~l~ 91 (172)
T 3htm_A 12 NMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMC 91 (172)
T ss_dssp CCSCCCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSCHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCCHHHHHHHHH
Confidence 34677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCcccccCCCCccccHHHHHHHHHHhcccChhhHHHHHHHHHHccCChhhHHHHHHHHHhCCChHHHHHHHHH
Q 015666 244 FIYTDKFPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEELNAETVATTLALAEQHQCPQLKAICLKF 323 (403)
Q Consensus 244 ~iYt~~~~~~~~~~~~~~~~~~~~~~~~ll~~Ad~~~~~~L~~~c~~~L~~~l~~~n~~~~l~~A~~~~~~~L~~~~~~~ 323 (403)
|+|++.++. +.+++.+|+.+|++|+++.|+..|+++|.+.++.+|+..++.+|..|++..|+..|++|
T Consensus 92 ~~Yt~~~~~------------~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~A~~~~~~~L~~~~~~~ 159 (172)
T 3htm_A 92 FIYTGKAPN------------LDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDF 159 (172)
T ss_dssp HHHHSCCTT------------GGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHhCCCCCC------------cHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 999999873 45789999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCChHHHHcccc
Q 015666 324 AATPANLGVIMQSEG 338 (403)
Q Consensus 324 i~~~~~~~~~~~~~~ 338 (403)
|. +|+.++..+++
T Consensus 160 i~--~~~~~v~~s~~ 172 (172)
T 3htm_A 160 IN--YHATDVLETSG 172 (172)
T ss_dssp HH--HTC--------
T ss_pred HH--HHHHHHHcCCC
Confidence 99 99999887753
No 3
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.96 E-value=4.4e-29 Score=228.92 Aligned_cols=169 Identities=21% Similarity=0.284 Sum_probs=146.3
Q ss_pred CCchHHHHHHHhhcCCCCceEEEeCCceeeeehhhhhhcCHHHHHHhccccc--CCCCCcEEEcCCCHHHHHHHHHHHhc
Q 015666 170 PSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVG--DRNLDKVVVKDVEPSIFKAMLLFIYT 247 (403)
Q Consensus 170 ~~~l~~~l~~~~~~~~~~Dv~~~v~~~~~~aHk~iLa~~S~~F~~~f~~~~~--e~~~~~i~l~d~~~~~f~~~L~~iYt 247 (403)
+..+.+.+++++.++.++||+|.|+|++|+|||.||+++|+||++||.+++. |+....|.++++++++|+.+|+|+||
T Consensus 15 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~~ll~~~Yt 94 (256)
T 3hve_A 15 AARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFS 94 (256)
T ss_dssp HHHHHHHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHHHHHhhccC
Confidence 4568889999999999999999999999999999999999999999999887 66778899999999999999999999
Q ss_pred CCCCCcccccCCCCccccHHHHHHHHHHhcccChhhHHHHHHHHHHccCChhhHHHHHHHHHhCCChHHHHHHHHHhcCC
Q 015666 248 DKFPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEELNAETVATTLALAEQHQCPQLKAICLKFAATP 327 (403)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~Ad~~~~~~L~~~c~~~L~~~l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~ 327 (403)
|.+.. +.+++.+++.+|++|+++.|+..|+++|.+.++.+||+.++.+|..|++..|++.|.+||.
T Consensus 95 ~~~~i------------~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~-- 160 (256)
T 3hve_A 95 GQIRL------------NEDTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGIRDFALHYCLHHVHYLATEYLE-- 160 (256)
T ss_dssp SCCCC------------C-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHHHHHHHHTTCHHHHHHHHHHHH--
T ss_pred CCCcc------------cHhHHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHHHHHHHHcCcHHHHHHHHHHHH--
Confidence 99973 4578999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHcccchhHHHhhCcHHHHHHHH
Q 015666 328 ANLGVIMQSEGFKHLEESCPSLLSELLK 355 (403)
Q Consensus 328 ~~~~~~~~~~~f~~l~~~~p~l~~ell~ 355 (403)
.|+..+..+++|.+|+. +.+.++|.
T Consensus 161 ~~f~~v~~~~~f~~L~~---~~l~~lL~ 185 (256)
T 3hve_A 161 THFRDVSSTEEFLELSP---QKLKEVIS 185 (256)
T ss_dssp HHHHHHTTCHHHHSSCH---HHHHHHHH
T ss_pred HHHHHHhCCcchhcCCH---HHHHHHHc
Confidence 99999999999998864 35555554
No 4
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.95 E-value=2.2e-28 Score=227.13 Aligned_cols=161 Identities=24% Similarity=0.366 Sum_probs=144.5
Q ss_pred CCchHHHHHHHhhcCCCCceEEEeC---CceeeeehhhhhhcCHHHHHHhcccccCCCCCcEEEc------CCCHHHHHH
Q 015666 170 PSDMGQGLKDLLESEIGCDIVFEVG---DETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVK------DVEPSIFKA 240 (403)
Q Consensus 170 ~~~l~~~l~~~~~~~~~~Dv~~~v~---~~~~~aHk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~------d~~~~~f~~ 240 (403)
++.+.+.+++++.++.++||+|.|+ |++|+|||.||+++|+||++||.+++.|+....|.|+ ++++++|+.
T Consensus 16 ~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~~f~~ 95 (279)
T 3i3n_A 16 CSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEA 95 (279)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSCHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCCHHHHHH
Confidence 4567889999999999999999998 9999999999999999999999999999999999998 899999999
Q ss_pred HHHHHhcCCCCCcccccCCCCccccHHHHHHHHHHhcccChhhHHHHHHHHHHccCChhhHHHHHHHHHhCCChHHHHHH
Q 015666 241 MLLFIYTDKFPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEELNAETVATTLALAEQHQCPQLKAIC 320 (403)
Q Consensus 241 ~L~~iYt~~~~~~~~~~~~~~~~~~~~~~~~ll~~Ad~~~~~~L~~~c~~~L~~~l~~~n~~~~l~~A~~~~~~~L~~~~ 320 (403)
+|+|+|||.+. ++.+++.+|+.+|++|+++.|+..|+++|.+.++.+||+.++.+|..|++..|++.|
T Consensus 96 ll~~~Ytg~~~------------i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~ 163 (279)
T 3i3n_A 96 VIEYMYTGRIR------------VSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQLALKA 163 (279)
T ss_dssp HHHHHHHSEEE------------EETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHhhCcCCcc------------cCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHHHHHHHcCcHHHHHHH
Confidence 99999999987 445789999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCChHHHHcccchhHHHh
Q 015666 321 LKFAATPANLGVIMQSEGFKHLEE 344 (403)
Q Consensus 321 ~~~i~~~~~~~~~~~~~~f~~l~~ 344 (403)
.+||. .|+..+..+++|.+|+.
T Consensus 164 ~~~i~--~~f~~v~~~~~f~~L~~ 185 (279)
T 3i3n_A 164 ADMIR--RNFHKVIQDEEFYTLPF 185 (279)
T ss_dssp HHHHH--HTHHHHTTSSGGGGSCH
T ss_pred HHHHH--HHHHHHhcCcChhcCCH
Confidence 99999 99999999999998863
No 5
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.95 E-value=1.3e-28 Score=206.04 Aligned_cols=142 Identities=43% Similarity=0.676 Sum_probs=108.7
Q ss_pred ccCCCCCchHHHHHHHhhcCCCCceEEEeCCceeeeehhhhhhcCHHHHHHhcccccCCCCCcEEEcCCCHHHHHHHHHH
Q 015666 165 SIPVPPSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLF 244 (403)
Q Consensus 165 ~~~~~~~~l~~~l~~~~~~~~~~Dv~~~v~~~~~~aHk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~d~~~~~f~~~L~~ 244 (403)
.++.|++.+.+++.++++++.++||+|.++|+.|+|||.||+++|+||++||.+++.|+....|.++++++++|+.+|+|
T Consensus 4 ~v~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l~~ 83 (145)
T 4eoz_A 4 MVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCF 83 (145)
T ss_dssp -CCCCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHHHH
T ss_pred cccCChHHHHHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCCHHHHHHHHHh
Confidence 46788999999999999999999999999999999999999999999999999999998888999999999999999999
Q ss_pred HhcCCCCCcccccCCCCccccHHHHHHHHHHhcccChhhHHHHHHHHHHccCChhhHHHHHHHHHhCCChHHHH
Q 015666 245 IYTDKFPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEELNAETVATTLALAEQHQCPQLKA 318 (403)
Q Consensus 245 iYt~~~~~~~~~~~~~~~~~~~~~~~~ll~~Ad~~~~~~L~~~c~~~L~~~l~~~n~~~~l~~A~~~~~~~L~~ 318 (403)
+|++.++. +.+++.+++.+|++|+++.|+..|+++|.+.++.+|+..++.+|..|++..|++
T Consensus 84 ~Y~~~~~~------------~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~Lk~ 145 (145)
T 4eoz_A 84 IYTGKAPN------------LDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKT 145 (145)
T ss_dssp HHHSCCTT------------GGGTHHHHHHHHHHTTCHHHHHHHHCC---------------------------
T ss_pred hccCccCC------------cHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHhcC
Confidence 99999873 357899999999999999999999999999999999999999999999998874
No 6
>3ivv_A Speckle-type POZ protein; protein binding, nucleus, UBL conjugation pathway, ligase; 1.25A {Homo sapiens} SCOP: b.8.1.1 PDB: 3ivq_A 3ivb_A 3hsv_A 3hqh_A 3hqm_A 3hql_A 2cr2_A
Probab=99.91 E-value=3e-24 Score=179.19 Aligned_cols=132 Identities=27% Similarity=0.559 Sum_probs=106.6
Q ss_pred eeeeeEEEEEEcCccccccCCCCCeeecccceecCe---eEEEEEEcCCCCCCCCCceEEEEEEecc-CCcceEEEEEEE
Q 015666 15 ETVNGSHQFTVKGYSLAKGMGPGKCLSSDVFTVGGY---DWAIYFYPDGKNPEDGALYVSVFIALAS-EGTDVRALFELT 90 (403)
Q Consensus 15 ~~~~~~~~w~I~~fs~~~~~~~~~~~~S~~F~~~g~---~W~l~~~p~g~~~~~~~~~lslyL~~~~-~~~~v~~~~~~~ 90 (403)
++..++|.|+|+||+.++. +.|+.+.||+|.+||+ +|+|++||||++.+.++ |||+||.|.. ..|++.|+|+|+
T Consensus 7 ~~~~~~~~w~I~~fs~~~~-~~g~~~~S~~F~~gg~~g~~W~i~~yP~G~~~~~~~-~lSlyL~l~~~~~w~v~a~f~l~ 84 (145)
T 3ivv_A 7 KVVKFSYMWTINNFSFCRE-EMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKD-YLSLYLLLVSCPKSEVRAKFKFS 84 (145)
T ss_dssp CCCEEEEEEEESSGGGCCC-CTTCCEECCCEEESGGGCEEEEEEEETTCSSGGGTT-EEEEEEEEEECSSSEEEEEEEEE
T ss_pred cEEEEEEEEEEcCchHHhh-cCCCEEECCCcCCCCcCCceEEEEEEcCCCCCCCCC-eEEEEEEEcCCCCCcEEEEEEEE
Confidence 4678999999999999876 6788999999999996 99999999998766566 9999999974 479999999999
Q ss_pred EeeCCCCCccceecccccccccCCccccccCccCccceeecccc--ccCcccCCCcEEEEEEeeeec
Q 015666 91 LVDQSGKGKHKVHSHFDRALESGPYTLKYRGSMGYKRFFKRTSL--ETSDYIKDDCLLINCTVGVVR 155 (403)
Q Consensus 91 ll~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~fi~~~~L--~~~~~l~dd~l~i~~~v~i~~ 155 (403)
|+|+++........ ...+.|.....+||.+||++++| +.++||.||+++|+|+|.|.+
T Consensus 85 llnq~~~~~~~~~~-------~~~~~F~~~~~wG~~~Fi~~~~L~~~~~~yl~dD~l~I~~~V~V~~ 144 (145)
T 3ivv_A 85 ILNAKGEETKAMES-------QRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQ 144 (145)
T ss_dssp EECTTSCEEEEEEC-------SSCEEEETTCEEEEEEEEEHHHHHCGGGCSSGGGCEEEEEEEEECC
T ss_pred EEecCCCceeeecc-------cceEEecCCCCcCHHHeEEhhhhccccCCcEeCCEEEEEEEEEEEe
Confidence 99998754321111 11233432222299999999999 568999999999999999975
No 7
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.91 E-value=3e-24 Score=173.33 Aligned_cols=111 Identities=26% Similarity=0.373 Sum_probs=100.0
Q ss_pred CCchHHHHHHHhhcCCCCceEEEeCCceeeeehhhhhhcCHHHHHHhcccccCCCCCcEEEcCCCHHHHHHHHHHHhcCC
Q 015666 170 PSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDK 249 (403)
Q Consensus 170 ~~~l~~~l~~~~~~~~~~Dv~~~v~~~~~~aHk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~d~~~~~f~~~L~~iYt~~ 249 (403)
++.+.+.+.+++.++.++||+|.++|++|+|||.||+++|+||++||.+++.|+....|.++++++++|+.+|+|+|||.
T Consensus 9 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~ll~~~Yt~~ 88 (120)
T 2if5_A 9 SSDILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVSAEALTALMDFAYTAT 88 (120)
T ss_dssp HHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCCHHHHHHHHHHHcCCC
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCCCccccHHHHHHHHHHhcccChhhHHHHHHHHH
Q 015666 250 FPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKL 292 (403)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~ll~~Ad~~~~~~L~~~c~~~L 292 (403)
++. +.+++.+++.+|++|+++.|++.|+++|
T Consensus 89 ~~~------------~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 89 LTV------------STANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp CCC------------CGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred Ccc------------CHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 884 4578999999999999999999999987
No 8
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.90 E-value=9.5e-24 Score=172.16 Aligned_cols=113 Identities=26% Similarity=0.381 Sum_probs=105.3
Q ss_pred CCCchHHHHHHHhhcCCCCceEEEeCCceeeeehhhhhhcCHHHHHHhcccccCCCCCcEEE-cCCCHHHHHHHHHHHhc
Q 015666 169 PPSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVV-KDVEPSIFKAMLLFIYT 247 (403)
Q Consensus 169 ~~~~l~~~l~~~~~~~~~~Dv~~~v~~~~~~aHk~iLa~~S~~F~~~f~~~~~e~~~~~i~l-~d~~~~~f~~~L~~iYt 247 (403)
.++.+.+++.+++.++.++||+|.++|++|+|||.||+++|+||++||.+++.| ....|.| +++++++|+.+|+|+|+
T Consensus 12 ~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~~~~~~~f~~ll~~~Yt 90 (127)
T 1r29_A 12 HASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDPEINPEGFNILLDFMYT 90 (127)
T ss_dssp HHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCCCCCHHHHHHHHHHHcC
Confidence 345688999999999999999999999999999999999999999999999998 7788999 99999999999999999
Q ss_pred CCCCCcccccCCCCccccHHHHHHHHHHhcccChhhHHHHHHHHHHc
Q 015666 248 DKFPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCE 294 (403)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~Ad~~~~~~L~~~c~~~L~~ 294 (403)
+.+.. +.+++.+|+.+|++|+++.|++.|+++|.+
T Consensus 91 g~~~~------------~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 125 (127)
T 1r29_A 91 SRLNL------------REGNIMAVMATAMYLQMEHVVDTCRKFIKA 125 (127)
T ss_dssp SCCCC------------CTTTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred CCcCc------------CHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 99874 347899999999999999999999999975
No 9
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.89 E-value=1.8e-23 Score=165.74 Aligned_cols=103 Identities=34% Similarity=0.525 Sum_probs=90.5
Q ss_pred HhhcCCCCceEEEeCC----ceeeeehhhhhhcCHHHHHHhcccccCCCCCcEEEcCCCHHHHHHHHHHHhcCCCCCccc
Q 015666 180 LLESEIGCDIVFEVGD----ETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYE 255 (403)
Q Consensus 180 ~~~~~~~~Dv~~~v~~----~~~~aHk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~d~~~~~f~~~L~~iYt~~~~~~~~ 255 (403)
+++++.++||+|.+++ +.|+|||.||+++|+||++||.+++.|+. ..|.++++++++|+.+|+|+|++.++.
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~~~~f~~~l~~iYt~~~~~--- 77 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVEPAAFLILLKYMYSDEIDL--- 77 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSCHHHHHHHHHHHHHCCCCC---
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCCHHHHHHHHHHHcCCCccC---
Confidence 4668899999999998 89999999999999999999999999988 899999999999999999999999874
Q ss_pred ccCCCCccccHHHHHHHHHHhcccChhhHHHHHHHHHHcc
Q 015666 256 ITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEE 295 (403)
Q Consensus 256 ~~~~~~~~~~~~~~~~ll~~Ad~~~~~~L~~~c~~~L~~~ 295 (403)
+.+++.+++.+|++|+++.|++.|+++|.+.
T Consensus 78 ---------~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 78 ---------EADTVLATLYAAKKYIVPALAKACVNFLETS 108 (109)
T ss_dssp ---------CTTTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ---------CHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 3478999999999999999999999999765
No 10
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.89 E-value=7.2e-24 Score=175.37 Aligned_cols=119 Identities=23% Similarity=0.350 Sum_probs=108.1
Q ss_pred CCCCchHHHHHHHhhcCCCCceEEEeCCceeeeehhhhhhcCHHHHHHhcccccCCCCCcEEEc-CCCHHHHHHHHHHHh
Q 015666 168 VPPSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVK-DVEPSIFKAMLLFIY 246 (403)
Q Consensus 168 ~~~~~l~~~l~~~~~~~~~~Dv~~~v~~~~~~aHk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~-d~~~~~f~~~L~~iY 246 (403)
.+++.+.+++.+++.++.++||+|.++|++|+|||.||+++|+||++||.+++.+. ..|.++ ++++++|+.+|+|+|
T Consensus 18 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~--~~i~l~~~v~~~~~~~lL~~~Y 95 (138)
T 2z8h_A 18 VHSTNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDAE--LTVTLPEEVTVKGFEPLIQFAY 95 (138)
T ss_dssp SHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCTT--EEEECCTTSCHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCCC--ceEEeCCCCCHHHHHHHHHHhc
Confidence 34567889999999999999999999999999999999999999999999887763 478895 899999999999999
Q ss_pred cCCCCCcccccCCCCccccHHHHHHHHHHhcccChhhHHHHHHHHHHccCChhh
Q 015666 247 TDKFPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEELNAET 300 (403)
Q Consensus 247 t~~~~~~~~~~~~~~~~~~~~~~~~ll~~Ad~~~~~~L~~~c~~~L~~~l~~~n 300 (403)
||.+.. +.+++.+|+.+|++|+++.|++.|+++|.+.++..|
T Consensus 96 tg~~~i------------~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~~sn 137 (138)
T 2z8h_A 96 TAKLIL------------SKDNVDEVCRCVEFLSVHNIEESCFQFLKFKFLDST 137 (138)
T ss_dssp HSCCCC------------CTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCCSCCC
T ss_pred CCCccc------------CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccccc
Confidence 999874 457899999999999999999999999999888765
No 11
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.89 E-value=2.4e-23 Score=167.62 Aligned_cols=108 Identities=29% Similarity=0.290 Sum_probs=98.5
Q ss_pred CchHHHHHHHhhcCCCCceEEEeCCceeeeehhhhhhcCHHHHHHhcccccCCCCCcEEEcCCCHHHHHHHHHHHhcCCC
Q 015666 171 SDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDKF 250 (403)
Q Consensus 171 ~~l~~~l~~~~~~~~~~Dv~~~v~~~~~~aHk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~d~~~~~f~~~L~~iYt~~~ 250 (403)
+.+.+++++++.++.++||+|.++|++|+|||.||+++|+||++||.+++ ...|.|+++++++|+.+|+|+|||.+
T Consensus 9 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~----~~~i~l~~~~~~~f~~ll~~iYtg~~ 84 (119)
T 3b84_A 9 VRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS----GGSVVLPAGFAEIFGLLLDFFYTGHL 84 (119)
T ss_dssp HHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT----CCCEEECGGGHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC----CCeEEeCCCCHHHHHHHHHHHcCCCC
Confidence 45778999999999999999999999999999999999999999998765 56799999999999999999999998
Q ss_pred CCcccccCCCCccccHHHHHHHHHHhcccChhhHHHHHHHHHHc
Q 015666 251 PDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCE 294 (403)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~ll~~Ad~~~~~~L~~~c~~~L~~ 294 (403)
+. +.+++.+|+.+|++|+++.|++.|+++|.+
T Consensus 85 ~~------------~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (119)
T 3b84_A 85 AL------------TSGNRDQVLLAARELRVPEAVELCQSFKPK 116 (119)
T ss_dssp CC------------CTTTHHHHHHHHHHTTCHHHHHHHHHCC--
T ss_pred cc------------CHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 84 347899999999999999999999998865
No 12
>4gjh_A TNF receptor-associated factor 5; TRAF domain, immune system; 2.81A {Mus musculus}
Probab=99.89 E-value=3.4e-23 Score=178.59 Aligned_cols=137 Identities=27% Similarity=0.433 Sum_probs=106.5
Q ss_pred eeeeeEEEEEEcCcccccc---CCCCCeeecccceec--CeeEEEEEEcCCCCCCCCCceEEEEEEecc------CCcce
Q 015666 15 ETVNGSHQFTVKGYSLAKG---MGPGKCLSSDVFTVG--GYDWAIYFYPDGKNPEDGALYVSVFIALAS------EGTDV 83 (403)
Q Consensus 15 ~~~~~~~~w~I~~fs~~~~---~~~~~~~~S~~F~~~--g~~W~l~~~p~g~~~~~~~~~lslyL~~~~------~~~~v 83 (403)
.+..++|.|+|+||+.+++ ++.|..+.||+|.+| |++|+|.+||||++.+.++ ||||||.|.. ..|++
T Consensus 20 ~~~~g~~~w~I~~fS~~~~~~~~g~~~~i~S~~F~~g~~G~~W~i~~yP~G~~~~~~~-~lSlyL~l~~~~~d~~l~W~v 98 (178)
T 4gjh_A 20 ACYSGKLIWKVTDYRVKKREAVEGHTVSVFSQPFYTSRCGYRLCARAYLNGDGSGKGT-HLSLYFVVMRGEFDSLLQWPF 98 (178)
T ss_dssp CCSSSEEEEEECCHHHHHHHHHTTSCCCEECCCEESSTTSCEEEEEEETTCCGGGTTT-EEEEEEEEBCCTTGGGSCSSC
T ss_pred cccceEEEEEECCHHHHHhhhhcCCCcEEECCCeEeCCCCeEEEEEEEECCCCCCCCC-EEEEEEEEecCCCCcccCCce
Confidence 3567999999999998876 556668999999999 9999999999998766666 9999999952 26999
Q ss_pred EEEEEEEEeeCCCCCccceecccccccccCCccccc----cCcc-Cccceeecccccc--CcccCCCcEEEEEEeeeec
Q 015666 84 RALFELTLVDQSGKGKHKVHSHFDRALESGPYTLKY----RGSM-GYKRFFKRTSLET--SDYIKDDCLLINCTVGVVR 155 (403)
Q Consensus 84 ~~~~~~~ll~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~-G~~~fi~~~~L~~--~~~l~dd~l~i~~~v~i~~ 155 (403)
.++|+|.|+||++........ +... .....|.. .+.. ||.+||++++|+. ++||.||+++|+|+|.|.+
T Consensus 99 ~a~~~l~Lldq~~~~~~~~~~-~~~~--~~~~~F~~p~~~~~~~wG~~~Fi~~~~L~~~~~~yL~dD~l~I~~~V~i~~ 174 (178)
T 4gjh_A 99 RQRVTLMLLDQSGKKNHIVET-FKAD--PNSSSFKRPDGEMNIASGCPRFVSHSTLENSKNTYIKDDTLFLKVAVDLTD 174 (178)
T ss_dssp CCEEEEEECCTTSSCCCEEEE-EECC--TTCGGGSCCSSSBCCCEEEEEEEEHHHHHCTTCCSSBTTBEEEEEEECCTT
T ss_pred EEEEEEEEEcCCCCcceeEEe-eccC--CccccccCCcccccCCcChhheeEHHHhhccccCcCcCCEEEEEEEEEecC
Confidence 999999999999765322211 0000 01123321 1223 9999999999986 7999999999999998865
No 13
>4ghu_A TNF receptor-associated factor 3; alpha/beta, innate immunity, IFN pathway, immune system; 2.20A {Mus musculus} PDB: 2gkw_A 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=99.89 E-value=2.6e-23 Score=181.68 Aligned_cols=138 Identities=26% Similarity=0.398 Sum_probs=107.1
Q ss_pred eeeeEEEEEEcCcccccc---CCCCCeeecccceec--CeeEEEEEEcCCCCCCCCCceEEEEEEecc------CCcceE
Q 015666 16 TVNGSHQFTVKGYSLAKG---MGPGKCLSSDVFTVG--GYDWAIYFYPDGKNPEDGALYVSVFIALAS------EGTDVR 84 (403)
Q Consensus 16 ~~~~~~~w~I~~fs~~~~---~~~~~~~~S~~F~~~--g~~W~l~~~p~g~~~~~~~~~lslyL~~~~------~~~~v~ 84 (403)
+..|+|+|+|.||+.+++ ++.|+++.||+|.+| |++|+|++||||++.+.++ ||||||.+.+ ..|++.
T Consensus 37 ~~~g~~~w~I~nfS~~~~~~~~~~g~~i~S~~F~vg~~Gy~W~i~~yPnG~~~~~~~-~lSlyL~l~~g~~D~~l~wp~~ 115 (198)
T 4ghu_A 37 SYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGT-HLSLFFVIMRGEYDALLPWPFK 115 (198)
T ss_dssp CSSSEEEEEECCHHHHHHHHHTTSSCCEECCCEESSTTSCEEEEEEETTCCGGGTTT-EEEEEEEEECCTTGGGSCSSCC
T ss_pred ccccEEEEEECCHHHHHhhhccCCCcEEECCCeEECCCCcEEEEEEEeCCCCCCCCC-eEEEEEEecCCccCCCCCceEE
Confidence 467899999999998876 677899999999999 9999999999998766666 9999999863 279999
Q ss_pred EEEEEEEeeCCCCCccceecccccccccCCc--cccccCcc-CccceeeccccccCcccCCCcEEEEEEeeeec
Q 015666 85 ALFELTLVDQSGKGKHKVHSHFDRALESGPY--TLKYRGSM-GYKRFFKRTSLETSDYIKDDCLLINCTVGVVR 155 (403)
Q Consensus 85 ~~~~~~ll~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~-G~~~fi~~~~L~~~~~l~dd~l~i~~~v~i~~ 155 (403)
++|+|.|+||.+........ +........+ .+...+.+ ||.+||++++|+.++||.||+++|+|+|.+..
T Consensus 116 a~~~l~Lldq~~~~~~~~~~-~~~~~~~~~f~rp~~~~~~~wG~~~Fi~~~~L~~~gyL~dD~l~I~~~V~v~~ 188 (198)
T 4ghu_A 116 QKVTLMLMDQGSSRRHLGDA-FKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTSD 188 (198)
T ss_dssp CCEEEEECCCSTTCCCEEEE-ECCCTTSGGGSCCSSSBCCCEEEEEEEEHHHHHHTTSCBTTBEEEEEEECCTT
T ss_pred EEEEEEEEcCCCCccceEEE-eecCcccceecCCcccCcCCcCchhEeEHHHhhhcCCeeCCEEEEEEEEEecc
Confidence 99999999998754322211 0000000001 01112223 99999999999988999999999999999976
No 14
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.89 E-value=2.7e-23 Score=172.98 Aligned_cols=111 Identities=23% Similarity=0.338 Sum_probs=98.4
Q ss_pred CCchHHHHHHHhhcCCCCceEEEeCCceeeeehhhhhhcCHHHHHHhcccccC--CCCCcEEEcCCCHHHHHHHHHHHhc
Q 015666 170 PSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGD--RNLDKVVVKDVEPSIFKAMLLFIYT 247 (403)
Q Consensus 170 ~~~l~~~l~~~~~~~~~~Dv~~~v~~~~~~aHk~iLa~~S~~F~~~f~~~~~e--~~~~~i~l~d~~~~~f~~~L~~iYt 247 (403)
+..+.+++.+++.++.++||+|.++|++|+|||.||+++|+||++||.+++.+ +....|.|+++++++|+.+|+|+|+
T Consensus 31 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~~lL~fiYt 110 (144)
T 2ppi_A 31 AARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFS 110 (144)
T ss_dssp HHHHHHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHHHHHHHHHHHhC
Confidence 34678899999999999999999999999999999999999999999988875 5677899999999999999999999
Q ss_pred CCCCCcccccCCCCccccHHHHHHHHHHhcccChhhHHHHHHHHH
Q 015666 248 DKFPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKL 292 (403)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~Ad~~~~~~L~~~c~~~L 292 (403)
|.+.. +.+++.+|+.+|++|+++.|++.|+++|
T Consensus 111 g~~~i------------~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 111 GQIRL------------NEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp SCCCC------------CTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred CCCCC------------CHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 99873 4578999999999999999999999876
No 15
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.88 E-value=6.5e-23 Score=165.66 Aligned_cols=109 Identities=23% Similarity=0.379 Sum_probs=100.1
Q ss_pred CCchHHHHHHHhhcCCCCceEEEeCCceeeeehhhhhhcCHHHHHHhcccccCCCCCcEEEcCCCHHHHHHHHHHHhcCC
Q 015666 170 PSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDK 249 (403)
Q Consensus 170 ~~~l~~~l~~~~~~~~~~Dv~~~v~~~~~~aHk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~d~~~~~f~~~L~~iYt~~ 249 (403)
++.+.+.+++++.++.++||+|.++|++|+|||.||+++||||++||.++ ..+|.++++++++|+.+|+|+|||.
T Consensus 12 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~~~~~~~f~~ll~~~Ytg~ 86 (121)
T 1buo_A 12 PTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN-----SQHYTLDFLSPKTFQQILEYAYTAT 86 (121)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC-----CcEEEeCCCCHHHHHHHHHhhcCCC
Confidence 45678899999999999999999999999999999999999999999763 5679999999999999999999999
Q ss_pred CCCcccccCCCCccccHHHHHHHHHHhcccChhhHHHHHHHHHHcc
Q 015666 250 FPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEE 295 (403)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~ll~~Ad~~~~~~L~~~c~~~L~~~ 295 (403)
++. +.+++.+++.+|++|+++.|++.|+++|.+.
T Consensus 87 ~~~------------~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 87 LQA------------KAEDLDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp CCC------------CGGGHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred cCC------------CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 984 3578999999999999999999999999754
No 16
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.88 E-value=3.9e-23 Score=170.20 Aligned_cols=114 Identities=27% Similarity=0.272 Sum_probs=97.5
Q ss_pred CCchHHHHHHHhhcCCCCceEEEeCCceeeeehhhhhhcCHHHHHHhcccccCCCCCcEEEcCCCHHHHHHHHHHHhcCC
Q 015666 170 PSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDK 249 (403)
Q Consensus 170 ~~~l~~~l~~~~~~~~~~Dv~~~v~~~~~~aHk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~d~~~~~f~~~L~~iYt~~ 249 (403)
...+.++++++++++.++||+|.++|++|+|||.||+++|+||++||.+++ ...|.|+++++++|+.+|+|+|++.
T Consensus 9 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~----~~~i~l~~~~~~~f~~lL~fiYtg~ 84 (135)
T 2yy9_A 9 SVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT----GGSVVLPAGFAEIFGLLLDFFYTGH 84 (135)
T ss_dssp HHHHHHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC--------CCEEECGGGHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC----CCeEEeCCCCHHHHHHHHHHHhCCC
Confidence 346788999999999999999999999999999999999999999998876 5679999999999999999999999
Q ss_pred CCCcccccCCCCccccHHHHHHHHHHhcccChhhHHHHHHHHHHccCChh
Q 015666 250 FPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEELNAE 299 (403)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~ll~~Ad~~~~~~L~~~c~~~L~~~l~~~ 299 (403)
+.. +.+++.+|+.+|++|+++.|++.|+++|.+.+...
T Consensus 85 ~~i------------~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~ 122 (135)
T 2yy9_A 85 LAL------------TSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVGQ 122 (135)
T ss_dssp CCC------------CTTTHHHHHHHHHHTTCHHHHHHHHHCCC------
T ss_pred CCC------------CHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccCC
Confidence 874 45789999999999999999999999998765443
No 17
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.88 E-value=9.4e-23 Score=163.49 Aligned_cols=107 Identities=27% Similarity=0.400 Sum_probs=98.3
Q ss_pred CchHHHHHHHhhcCCCCceEEEeCCceeeeehhhhhhcCHHHHHHhcccccCCCCCcEEEc--CCCHHHHHHHHHHHhcC
Q 015666 171 SDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVK--DVEPSIFKAMLLFIYTD 248 (403)
Q Consensus 171 ~~l~~~l~~~~~~~~~~Dv~~~v~~~~~~aHk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~--d~~~~~f~~~L~~iYt~ 248 (403)
+.+.+++.+++.++.++||+|.++|++|+|||.||+++|+||++||.++ ....|.|+ ++++++|+.+|+|+|+|
T Consensus 7 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~----~~~~i~l~~~~~~~~~f~~ll~~~Yt~ 82 (116)
T 2vpk_A 7 EHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST----SENNVFLDQSQVKADGFQKLLEFIYTG 82 (116)
T ss_dssp HHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC----CCSCEECCTTTCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC----CCCeEEeecCCCCHHHHHHHHHHHcCC
Confidence 4577899999999999999999999999999999999999999999876 35678888 99999999999999999
Q ss_pred CCCCcccccCCCCccccHHHHHHHHHHhcccChhhHHHHHHHHHH
Q 015666 249 KFPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLC 293 (403)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~ll~~Ad~~~~~~L~~~c~~~L~ 293 (403)
.++. +.+++.+++.+|++|+++.|++.|+++|.
T Consensus 83 ~~~~------------~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 83 TLNL------------DSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp CCCC------------CTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred Cccc------------CHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9884 34789999999999999999999999985
No 18
>2foj_A Ubiquitin carboxyl-terminal hydrolase 7; MATH domain, hydrolase; 1.60A {Homo sapiens} PDB: 1yze_A 1yy6_A 2foo_A 2fop_A 3mqr_A 3mqs_C 2f1w_A 2f1x_A 2f1y_A 2xxn_A
Probab=99.88 E-value=2.6e-22 Score=169.41 Aligned_cols=125 Identities=17% Similarity=0.206 Sum_probs=96.7
Q ss_pred eeeEEEEEEcCccccccCCCCCeeecccceecCeeEEEEEEcCCCCC-CCCCceEEEEEEecc----CCcceEEEEEEEE
Q 015666 17 VNGSHQFTVKGYSLAKGMGPGKCLSSDVFTVGGYDWAIYFYPDGKNP-EDGALYVSVFIALAS----EGTDVRALFELTL 91 (403)
Q Consensus 17 ~~~~~~w~I~~fs~~~~~~~~~~~~S~~F~~~g~~W~l~~~p~g~~~-~~~~~~lslyL~~~~----~~~~v~~~~~~~l 91 (403)
..++|.|+|.||+.++ +.++||.|.+||++|+|.+||+|++. +.++ ||||||.|.. .+|.+.|+|++.|
T Consensus 17 ~~~~~~w~I~nfS~~~-----~~~~S~~f~~gg~~W~i~~yP~G~~~~~~~~-~lSlyL~~~~~~~~~~w~v~a~~~l~l 90 (155)
T 2foj_A 17 SEATFQFTVERFSRLS-----ESVLSPPCFVRNLPWKIMVMPRFYPDRPHQK-SVGFFLQCNAESDSTSWSCHAQAVLKI 90 (155)
T ss_dssp SEEEEEEEESSGGGCC-----SCEECCCEEETTEEEEEEEEEEC------CB-EEEEEEEESTTCCCSSCEEEEEEEEEE
T ss_pred CCcEEEEEECChhhcC-----CceEcCCEEECCccEEEEEEECCCCCCCCCC-EEEEEEEeCCCCCCCCCEEEEEEEEEE
Confidence 4589999999999975 57899999999999999999999765 2445 9999999973 3599999999999
Q ss_pred eeCCCCCccceecccccccccCCccccccCcc-Cccceeeccccc--cCcccCCCcEEEEEEeeeec
Q 015666 92 VDQSGKGKHKVHSHFDRALESGPYTLKYRGSM-GYKRFFKRTSLE--TSDYIKDDCLLINCTVGVVR 155 (403)
Q Consensus 92 l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~~fi~~~~L~--~~~~l~dd~l~i~~~v~i~~ 155 (403)
+|+++........ ..+.|...... ||.+||+|++|+ +++||.||+++|+|+|.|.+
T Consensus 91 ~~~~~~~~~~~~~--------~~~~F~~~~~~wG~~~Fi~~~~L~~~~~~yl~dD~l~Ie~~V~V~~ 149 (155)
T 2foj_A 91 INYRDDEKSFSRR--------ISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFVQADA 149 (155)
T ss_dssp CCSSCGGGCEEEE--------EEEEEETTBCEEEEEEEEEHHHHTCTTTSSCBTTBEEEEEEEEECC
T ss_pred EcCCCCcceEEec--------cEEEeCCCCCCEeECCeEEHHHhcCcCCCceECCEEEEEEEEEEeC
Confidence 9998754211111 12233322223 999999999996 68999999999999999954
No 19
>1lb6_A TNF receptor-associated factor 6; TRAF6-CD40 complex, signaling protein; 1.80A {Homo sapiens} SCOP: b.8.1.1 PDB: 1lb5_A 1lb4_A
Probab=99.87 E-value=2.5e-22 Score=170.42 Aligned_cols=135 Identities=21% Similarity=0.350 Sum_probs=101.7
Q ss_pred eeeEEEEEEcCcccccc-CCCCC--eeecccceec--CeeEEEEEEcCCCCCCC-CCceEEEEEEecc------CCcceE
Q 015666 17 VNGSHQFTVKGYSLAKG-MGPGK--CLSSDVFTVG--GYDWAIYFYPDGKNPED-GALYVSVFIALAS------EGTDVR 84 (403)
Q Consensus 17 ~~~~~~w~I~~fs~~~~-~~~~~--~~~S~~F~~~--g~~W~l~~~p~g~~~~~-~~~~lslyL~~~~------~~~~v~ 84 (403)
..++|.|+|+||+.+++ ++.|+ .+.||+|.+| |++|+|++||||++.+. ++ |||+||.+.. ..|++.
T Consensus 3 ~~g~~~w~I~~fS~~~~~~~~g~~~~i~S~~F~vg~~Gy~w~i~~yP~G~~~~~~~~-~lSlyL~l~~~~~d~~l~wp~~ 81 (160)
T 1lb6_A 3 CNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCAN-YISLFVHTMQGEYDSHLPWPFQ 81 (160)
T ss_dssp CCEEEEEEECCHHHHHHHHHTTCCEEEECCCEESSSSCCEEEEEEEECCTTCTTTTT-EEEEEEEEECCTTGGGSCSSCC
T ss_pred cCcEEEEEECCHHHHHHhhhcCCCeEEECcCeecCCCCeeEEEEEEecCCCCCCCCC-EEEEEEEEeecCCCccCCCcee
Confidence 46899999999998875 56677 8999999999 99999999999986553 55 9999998852 249999
Q ss_pred EEEEEEEeeCCCCCccceecccccccccC--Ccccc-----ccCcc-CccceeeccccccCcccCCCcEEEEEEeeeec
Q 015666 85 ALFELTLVDQSGKGKHKVHSHFDRALESG--PYTLK-----YRGSM-GYKRFFKRTSLETSDYIKDDCLLINCTVGVVR 155 (403)
Q Consensus 85 ~~~~~~ll~~~g~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~-G~~~fi~~~~L~~~~~l~dd~l~i~~~v~i~~ 155 (403)
++++|.|+||.+...... ..+++... ...|. .++.. ||.+||++++|+.++||.||+++|+|+|.|..
T Consensus 82 a~~~l~lldq~~~~~~~~---~~~~~~~~~~~~~f~~p~~~~~~~~~G~~~Fi~~~~L~~~~yl~dD~l~I~~~V~v~~ 157 (160)
T 1lb6_A 82 GTIRLTILDQSEAPVRQN---HEEIMDAKPELLAFQRPTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRF 157 (160)
T ss_dssp SEEEEEECCCSCTTSCCC---EEEEEECCTTSGGGSCCSSSBCSEEEEEEEEEEGGGGGTSCCCBTTBEEEEEEEEC--
T ss_pred eeEEEEEEcCCCcccccc---ceEEeecCCcchhccCCcccCCCCCcCEeeEeEHHHhhhCCCccCCEEEEEEEEEEee
Confidence 999999999987532110 00111100 11121 11212 99999999999988999999999999999875
No 20
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.86 E-value=3.3e-22 Score=160.94 Aligned_cols=107 Identities=26% Similarity=0.351 Sum_probs=97.5
Q ss_pred CCchHHHHHHHhhcCCCCceEEEeCCceeeeehhhhhhcCHHHHHHhcccccCCCCCcEEEcCCCHHHHHHHHHHHhcCC
Q 015666 170 PSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDK 249 (403)
Q Consensus 170 ~~~l~~~l~~~~~~~~~~Dv~~~v~~~~~~aHk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~d~~~~~f~~~L~~iYt~~ 249 (403)
.+.+.+.+++++.++.++||+|.++|++|+|||.||+++|+||++||.+. ...|.++++++++|+.+|+|+|||.
T Consensus 11 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~~~~~~~f~~ll~~~Ytg~ 85 (119)
T 2q81_A 11 SQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQ-----KDVVHLDISNAAGLGQVLEFMYTAK 85 (119)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHC-----CSGGGGGGCCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeCCCCHHHHHHHHHHHcCCC
Confidence 34677899999999999999999999999999999999999999999862 4568889999999999999999999
Q ss_pred CCCcccccCCCCccccHHHHHHHHHHhcccChhhHHHHHHHHHH
Q 015666 250 FPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLC 293 (403)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~ll~~Ad~~~~~~L~~~c~~~L~ 293 (403)
+.. +.+++.+|+.+|++|+++.|++.|+++|.
T Consensus 86 ~~i------------~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 86 LSL------------SPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp CCC------------CTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred Ccc------------CHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 874 34789999999999999999999999884
No 21
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.86 E-value=3.3e-23 Score=168.09 Aligned_cols=112 Identities=22% Similarity=0.388 Sum_probs=98.8
Q ss_pred CCCCchHHHHHHHhhcCCCCceEEEeCCceeeeehhhhhhcCHHHHHHhcccccCCCCCcEEE-cCCCHHHHHHHHHHHh
Q 015666 168 VPPSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVV-KDVEPSIFKAMLLFIY 246 (403)
Q Consensus 168 ~~~~~l~~~l~~~~~~~~~~Dv~~~v~~~~~~aHk~iLa~~S~~F~~~f~~~~~e~~~~~i~l-~d~~~~~f~~~L~~iY 246 (403)
.+++.+.+++++++.++.++||+|.++|++|+|||.||+++|+||++||.+++.|. ..|.+ .++++++|+.+|+|+|
T Consensus 11 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~--~~i~l~~~v~~~~f~~lL~~iY 88 (124)
T 2ihc_A 11 VHSTNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADGE--LNITLPEEVTVKGFEPLIQFAY 88 (124)
T ss_dssp SHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC---C--EEEECCTTSCHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCCC--ceEeecCCcCHHHHHHHHHHhc
Confidence 34567889999999999999999999999999999999999999999999988764 46888 5899999999999999
Q ss_pred cCCCCCcccccCCCCccccHHHHHHHHHHhcccChhhHHHHHHHHHH
Q 015666 247 TDKFPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLC 293 (403)
Q Consensus 247 t~~~~~~~~~~~~~~~~~~~~~~~~ll~~Ad~~~~~~L~~~c~~~L~ 293 (403)
||.+. ++.+++.+|+.+|++|+++.|++.|+++|.
T Consensus 89 tg~~~------------i~~~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 89 TAKLI------------LSKENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp HSEEE------------EETTTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred CCCcc------------cCHHHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 99887 445789999999999999999999998763
No 22
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.86 E-value=6.3e-23 Score=166.77 Aligned_cols=109 Identities=27% Similarity=0.400 Sum_probs=99.4
Q ss_pred CCchHHHHHHHhhcCCCCceEEEeCCceeeeehhhhhhcCHHHHHHhcccccCCCCCcEEEcC-CCHHHHHHHHHHHhcC
Q 015666 170 PSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKD-VEPSIFKAMLLFIYTD 248 (403)
Q Consensus 170 ~~~l~~~l~~~~~~~~~~Dv~~~v~~~~~~aHk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~d-~~~~~f~~~L~~iYt~ 248 (403)
.+.+.+.++++++++.++||+|.++|++|+|||.||+++|+||++||.+++.| ...|.+++ +++++|+.+|+|+|||
T Consensus 16 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e--~~~i~l~~~~~~~~f~~~l~~iYtg 93 (125)
T 3ohu_A 16 CTNILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN--DLVVSLPEEVTARGFGPLLQFAYTA 93 (125)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS--SCEEECCTTCCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC--CcEEEeCCCCCHHHHHHHHHhHcCC
Confidence 34678899999999999999999999999999999999999999999998777 67899998 9999999999999999
Q ss_pred CCCCcccccCCCCccccHHHHHHHHHHhcccChhhHHHHHHHHH
Q 015666 249 KFPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKL 292 (403)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~ll~~Ad~~~~~~L~~~c~~~L 292 (403)
.+. ++.+++.+|+.+|++|+++.|++.|+++|
T Consensus 94 ~~~------------~~~~~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 94 KLL------------LSRENIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp EEE------------ECTTTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred ceE------------ECHHHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 987 34578999999999999999999998653
No 23
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.86 E-value=2e-22 Score=164.67 Aligned_cols=110 Identities=23% Similarity=0.322 Sum_probs=93.6
Q ss_pred CCchHHHHHHHhhcCCCCceEEEeCCceeeeehhhhhhcCHHHHHHhcccccCCCCCcEEEc-CCCHHHHHHHHHHHhcC
Q 015666 170 PSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVK-DVEPSIFKAMLLFIYTD 248 (403)
Q Consensus 170 ~~~l~~~l~~~~~~~~~~Dv~~~v~~~~~~aHk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~-d~~~~~f~~~L~~iYt~ 248 (403)
...+.+.+++++.++.++||+|.++|+.|+|||.||+++|+||++||.++ ....|.|+ ++++++|+.+|+|+|+|
T Consensus 17 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~----~~~~i~l~~~~~~~~f~~ll~~iYtg 92 (129)
T 3ga1_A 17 GNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS----RSAVVELPAAVQPQSFQQILSFCYTG 92 (129)
T ss_dssp HHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC----CCSEEECCTTCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC----CCCEEEECCCCCHHHHHHHHHHHhCC
Confidence 34578889999999999999999999999999999999999999999876 56789996 99999999999999999
Q ss_pred CCCCcccccCCCCccccHHHHHHHHHHhcccChhhHHHHHHHHHHcc
Q 015666 249 KFPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEE 295 (403)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~ll~~Ad~~~~~~L~~~c~~~L~~~ 295 (403)
.+.. +.+++.+|+.+|++|+++.|++.|+++|.+.
T Consensus 93 ~~~i------------~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 93 RLSM------------NVGDQDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp EEEC------------CTTTHHHHHHHHHHTTBTTSSCC--------
T ss_pred cccc------------CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 9873 4578999999999999999999999999764
No 24
>1ca9_A TRAF2, protein (TNF receptor associated factor 2); TNF signaling, TRAF, adapter protein, cell surviVal; 2.30A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1qsc_A 1czz_A
Probab=99.85 E-value=6.3e-22 Score=172.89 Aligned_cols=135 Identities=19% Similarity=0.369 Sum_probs=103.7
Q ss_pred eeeeEEEEEEcCcccccc-CCCCC--eeeccccee--cCeeEEEEEEcCCCCCCCCCceEEEEEEecc------CCcceE
Q 015666 16 TVNGSHQFTVKGYSLAKG-MGPGK--CLSSDVFTV--GGYDWAIYFYPDGKNPEDGALYVSVFIALAS------EGTDVR 84 (403)
Q Consensus 16 ~~~~~~~w~I~~fs~~~~-~~~~~--~~~S~~F~~--~g~~W~l~~~p~g~~~~~~~~~lslyL~~~~------~~~~v~ 84 (403)
...++|.|+|.||+.++. .+.|+ .++||.|.+ ||++|+|.+||||++.+.++ |||+||.+.. ..|++.
T Consensus 40 ~~~g~~~w~I~nfS~~~~~~~~g~~~~i~S~~F~v~~gG~~W~i~~yP~G~~~~~~~-~lSlyL~l~~~~~~~~~~W~~~ 118 (192)
T 1ca9_A 40 TYDGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGT-HLSLFFVVMKGPNDALLRWPFN 118 (192)
T ss_dssp CSSSEEEEEEESHHHHHHHHHTTSSCCEECCCEESSTTSCEEEEEEETTCCGGGTTT-EEEEEEEEECCTTGGGSCSSCC
T ss_pred ccCceEEEEECCHHHHHHHhhcCCCceEECceEEeCCCCeEEEEEEEeCCCCCCCCC-EEEEEEEEccCCCCCcCCCceE
Confidence 367899999999998875 45566 699999999 99999999999998766666 9999999862 469999
Q ss_pred EEEEEEEeeCCCCCccceecccccccccCCcccc----ccCcc-Cccceeeccccc-cCcccCCCcEEEEEEeeeec
Q 015666 85 ALFELTLVDQSGKGKHKVHSHFDRALESGPYTLK----YRGSM-GYKRFFKRTSLE-TSDYIKDDCLLINCTVGVVR 155 (403)
Q Consensus 85 ~~~~~~ll~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~-G~~~fi~~~~L~-~~~~l~dd~l~i~~~v~i~~ 155 (403)
++|+|.|+|+++.... ... +.... ....|. ..+.+ ||.+||++++|+ .++||.||+++|+|+|.|.+
T Consensus 119 a~~~l~lldq~~~~~~-~~~-~~~~~--~~~~f~rp~~~~~~~wG~~~Fi~~~~L~~~~gyl~dD~l~I~~~V~V~~ 191 (192)
T 1ca9_A 119 QKVTLMLLDQNNREHV-IDA-FRPDV--TSSSFQRPVNDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVDLTG 191 (192)
T ss_dssp CCEEEEECCTTSSCCE-EEE-ECCCT--TSGGGSCCSSSBCCCEEEEEEEETHHHHSSCSSCBTTEEEEEEEECCTT
T ss_pred EEEEEEEECCCCCcee-eEe-eccCC--chhhhcCCccCCCCCcChhheeEHHHhhhccCCEeCCEEEEEEEEEecC
Confidence 9999999999876321 111 10000 011121 11223 999999999998 78999999999999999864
No 25
>2gkw_A TNF receptor-associated factor 3; CD40, NF-KB signaling, BAFF receptor, TRAF3, apoptosis; 2.70A {Homo sapiens} PDB: 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=99.85 E-value=4.1e-22 Score=173.77 Aligned_cols=135 Identities=27% Similarity=0.400 Sum_probs=104.1
Q ss_pred eeeEEEEEEcCccccc-cCCCCC--eeecccceec--CeeEEEEEEcCCCCCCCCCceEEEEEEecc------CCcceEE
Q 015666 17 VNGSHQFTVKGYSLAK-GMGPGK--CLSSDVFTVG--GYDWAIYFYPDGKNPEDGALYVSVFIALAS------EGTDVRA 85 (403)
Q Consensus 17 ~~~~~~w~I~~fs~~~-~~~~~~--~~~S~~F~~~--g~~W~l~~~p~g~~~~~~~~~lslyL~~~~------~~~~v~~ 85 (403)
..++|.|+|.||+.++ .++.|+ .+.||+|.+| ||+|+|++||||++.+.++ |||+||.+.. ..|++.+
T Consensus 38 ~~g~~~w~I~~fS~~~~~~~~g~~~~i~S~~F~vg~~Gykw~i~~yPnG~~~~~~~-~lSlyL~l~~~~~d~~l~wp~~a 116 (192)
T 2gkw_A 38 YNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGT-HLSLFFVIMRGEYDALLPWPFKQ 116 (192)
T ss_dssp CSSEEEEEEECHHHHHHHHHHTSCSCEECCCEESSTTSCEEEEEEETTCCGGGTTT-EEEEEEEEECCTTGGGSCSSCCC
T ss_pred cCcEEEEEECCHHHHHHHhhcCCCceEEcccEEECCCCcEEEEEEEeCCCCCCCCC-EEEEEEEEecCCCCccCCCcEEE
Confidence 5689999999999887 455666 6999999999 9999999999998766666 9999999852 2599999
Q ss_pred EEEEEEeeCCCCCccceecccccccccCCccccc----cCcc-CccceeeccccccCcccCCCcEEEEEEeeeec
Q 015666 86 LFELTLVDQSGKGKHKVHSHFDRALESGPYTLKY----RGSM-GYKRFFKRTSLETSDYIKDDCLLINCTVGVVR 155 (403)
Q Consensus 86 ~~~~~ll~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~-G~~~fi~~~~L~~~~~l~dd~l~i~~~v~i~~ 155 (403)
+++|.|+|+.+...+.... +... .....|.. .... ||++||++++|+.+|||.||+++|+|+|.|..
T Consensus 117 ~~~l~lldq~~~~~~~~~~-~~~~--~~~~~F~~~~~~~~~~wG~~~Fi~~~~L~~~gyl~dD~l~I~~~V~v~~ 188 (192)
T 2gkw_A 117 KVTLMLMDQGSSRRHLGDA-FKPD--PNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTSD 188 (192)
T ss_dssp CEEEEECCCSTTCCCEEEE-ECCC--TTCTTSSCCSSSBCCCEEEEEEEEHHHHHHTTSCBTTEEEEEEEECCTT
T ss_pred EEEEEEECCCCCccceEEE-EecC--CCcccccCCCCCCcCCCChHHEeEHHHhCcCCCeeCCEEEEEEEEEcCC
Confidence 9999999999865432111 1000 00112221 1122 99999999999888999999999999998764
No 26
>1d00_A Tumor necrosis factor receptor associated protein 2; B-sandwich, protein-peptide complex, apoptosis; 2.00A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1ca4_A 1d0j_A 1f3v_B 1czy_A 1d01_A 1d0a_A
Probab=99.85 E-value=1.3e-21 Score=167.43 Aligned_cols=135 Identities=19% Similarity=0.363 Sum_probs=102.0
Q ss_pred eeeeEEEEEEcCccccccC-CCCC--eeecccce--ecCeeEEEEEEcCCCCCCCCCceEEEEEEecc------CCcceE
Q 015666 16 TVNGSHQFTVKGYSLAKGM-GPGK--CLSSDVFT--VGGYDWAIYFYPDGKNPEDGALYVSVFIALAS------EGTDVR 84 (403)
Q Consensus 16 ~~~~~~~w~I~~fs~~~~~-~~~~--~~~S~~F~--~~g~~W~l~~~p~g~~~~~~~~~lslyL~~~~------~~~~v~ 84 (403)
...++|.|+|.||+.+++. ..|+ .+.||+|. +||++|+|++||||++.+.++ |||+||.+.. ..|++.
T Consensus 16 ~~~g~~~w~I~nfS~~~~~~~~g~~~~i~S~~F~~~~gG~~W~i~~yP~G~~~~~~~-~lSlyL~l~~~~~~~~~~w~~~ 94 (168)
T 1d00_A 16 TYDGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGT-HLSLFFVVMKGPNDALLRWPFN 94 (168)
T ss_dssp CSSSEEEEEEESHHHHHHHHHTTSSCCEECCCEESSTTSCEEEEEEETTCCGGGTTT-EEEEEEEEECCTTGGGSCSSCC
T ss_pred ccCCEEEEEECCHHHHHHHhhcCCCeEEECCCeecCCCCEEEEEEEEeCCCCCCCCc-EEEEEEEEecCCCCccCCCceE
Confidence 3578999999999988753 4566 49999995 789999999999998766666 9999999863 369999
Q ss_pred EEEEEEEeeCCCCCccceecccccccccCCccccc----cCcc-CccceeeccccccC-cccCCCcEEEEEEeeeec
Q 015666 85 ALFELTLVDQSGKGKHKVHSHFDRALESGPYTLKY----RGSM-GYKRFFKRTSLETS-DYIKDDCLLINCTVGVVR 155 (403)
Q Consensus 85 ~~~~~~ll~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~-G~~~fi~~~~L~~~-~~l~dd~l~i~~~v~i~~ 155 (403)
+++++.|+|+++... .... +.... ....|.. .+.+ ||.+||++++|+.+ +||.||+++|+|+|.|.+
T Consensus 95 ~~~~l~ll~q~~~~~-~~~~-~~~~~--~~~~f~~p~~~~~~~~G~~~Fi~~~~L~~~~gyl~dD~l~I~~~V~v~~ 167 (168)
T 1d00_A 95 QKVTLMLLDQNNREH-VIDA-FRPDV--TSSSFQRPVNDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVDLTG 167 (168)
T ss_dssp CCEEEEECCTTSSCC-EEEE-ECCCT--TSGGGSCCSSSBCCCEEEEEEEETTTTTSSSSSSBTTEEEEEEEECCTT
T ss_pred EEEEEEEECCCCCcc-ceec-cccCc--chhhccCCCcCCCCCcCcceEeEHHHhcccCCceeCCEEEEEEEEEecC
Confidence 999999999987532 1111 00000 0112211 1223 99999999999865 999999999999998853
No 27
>1flk_A TNF receptor associated factor 3; TNF signaling, TRAF3, CD40-binding protein, apoptosis; 2.80A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1fll_A
Probab=99.84 E-value=2.2e-21 Score=173.60 Aligned_cols=136 Identities=26% Similarity=0.379 Sum_probs=104.3
Q ss_pred eeeeEEEEEEcCcccccc-CCCC--Ceeecccceec--CeeEEEEEEcCCCCCCCCCceEEEEEEecc------CCcceE
Q 015666 16 TVNGSHQFTVKGYSLAKG-MGPG--KCLSSDVFTVG--GYDWAIYFYPDGKNPEDGALYVSVFIALAS------EGTDVR 84 (403)
Q Consensus 16 ~~~~~~~w~I~~fs~~~~-~~~~--~~~~S~~F~~~--g~~W~l~~~p~g~~~~~~~~~lslyL~~~~------~~~~v~ 84 (403)
...++|.|+|.||+.++. ++.| ..+.||+|.+| ||+|+|++||||++.+.++ |||+||.+.. ..|++.
T Consensus 73 ~~~g~~~wkI~nfS~~~~~~~~g~~~~i~S~~F~vg~~Gy~w~i~~yPnG~~~~~~~-~lSlyL~l~~~~~d~~l~Wp~~ 151 (228)
T 1flk_A 73 SYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGT-HLSLFFVIMRGEYDALLPWPFK 151 (228)
T ss_dssp CSSSEEEEEEECHHHHHHHHHTTSCCCEECCCEESSTTSCEECEEEETTCCGGGTTT-EEEEEECCBCCTTTTSSCSSCC
T ss_pred CcCcEEEEEECCHHHHHHHhhcCCCeeEECceEEeCCCCcEEEEEEEcCCCCCCCCC-EEEEEEEEecCCccccCCCcEE
Confidence 367899999999998864 4555 48999999999 9999999999998766666 9999998752 259999
Q ss_pred EEEEEEEeeCCCCCccceecccccccccCCcccc----ccCcc-CccceeeccccccCcccCCCcEEEEEEeeeec
Q 015666 85 ALFELTLVDQSGKGKHKVHSHFDRALESGPYTLK----YRGSM-GYKRFFKRTSLETSDYIKDDCLLINCTVGVVR 155 (403)
Q Consensus 85 ~~~~~~ll~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~-G~~~fi~~~~L~~~~~l~dd~l~i~~~v~i~~ 155 (403)
++++|.|+|+.+...+.... +.... ....|. ..+.+ ||++||++++|+.+|||.||+++|+|+|.+..
T Consensus 152 a~~~l~lldq~~~~~~~~~~-~~~~~--~~~~F~rp~~~~~~~wG~~~Fi~~~~L~~~gyL~dD~l~I~~~V~v~~ 224 (228)
T 1flk_A 152 QKVTLMLMDQGSSRRHLGDA-FKPDP--NSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTSD 224 (228)
T ss_dssp CCEEEEECCCSSSCCCEEEE-ECCCT--TCTTSSSCSSSBCCCCSEEEEEEHHHHSSSTTCCSSEEEEEEECCCTT
T ss_pred EEEEEEEEcCCCCccceeee-ecCCC--ccccccCCccCCCCCcCHHHeeEHHHHccCCCccCCEEEEEEEEEccc
Confidence 99999999998765322111 00000 011121 11222 99999999999988999999999999999864
No 28
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.83 E-value=2.6e-20 Score=149.01 Aligned_cols=101 Identities=25% Similarity=0.395 Sum_probs=91.7
Q ss_pred CCchHHHHHHHhhcCCCCceEEEeCCceeeeehhhhhhcCHHHHHHhcccccCCCCCcEEEcCCCHHHHHHHHHHHhcCC
Q 015666 170 PSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDK 249 (403)
Q Consensus 170 ~~~l~~~l~~~~~~~~~~Dv~~~v~~~~~~aHk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~d~~~~~f~~~L~~iYt~~ 249 (403)
.+.+.+.+++++.++.++||+|.++|+.|+|||.||+++|+||++||.++ ...|.++++++++|+.+|+|+|||.
T Consensus 15 ~~~l~~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~-----~~~i~l~~~~~~~f~~~l~~~Ytg~ 89 (116)
T 3fkc_A 15 SGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA-----GQVVELSFIRAEIFAEILNYIYSSK 89 (116)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeCCCCHHHHHHHHHhhcCCC
Confidence 45678889999999999999999999999999999999999999999864 5689999999999999999999999
Q ss_pred CCCcccccCCCCccccHHHHHHHHHHhcccChhhHHH
Q 015666 250 FPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKL 286 (403)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~ll~~Ad~~~~~~L~~ 286 (403)
++. ++.+++.+++.+|++|+++.|++
T Consensus 90 ~~~-----------~~~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 90 IVR-----------VRSDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp CCS-----------CCHHHHHHHHHHHHHHTCHHHHT
T ss_pred cCC-----------CCHHHHHHHHHHHHHhCccccCc
Confidence 842 34689999999999999999874
No 29
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.81 E-value=1.1e-20 Score=151.62 Aligned_cols=102 Identities=24% Similarity=0.312 Sum_probs=87.9
Q ss_pred CCchHHHHHHHhhcCCCCceEEEeCCceeeeehhhhhhcCHHHHHHhcccccCCCCCcEEEcCCCHHHHHHHHHHHhcCC
Q 015666 170 PSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDK 249 (403)
Q Consensus 170 ~~~l~~~l~~~~~~~~~~Dv~~~v~~~~~~aHk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~d~~~~~f~~~L~~iYt~~ 249 (403)
...+.+.++ ..++.++||+|.++|++|+|||.|||++|+||++ ....|.++++++++|+.+|+|+|||.
T Consensus 16 ~~~~l~~l~--r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~---------~~~~i~l~~v~~~~f~~ll~fiYtg~ 84 (119)
T 3m5b_A 16 SDRLVQLAA--RLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR---------RGQWALGEGISPSTFAQLLNFVYGES 84 (119)
T ss_dssp TCHHHHHHH--HHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC---------CEEEECCSSCCHHHHHHHHHHHTTCC
T ss_pred hHHHHHHHH--HhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc---------CCCEEEeCCCCHHHHHHHHHHHcCCC
Confidence 344555564 3468999999999999999999999999999974 24568999999999999999999999
Q ss_pred CCCcccccCCCCccccHHHHHHHHHHhcccChhhHHHHHHHHHHc
Q 015666 250 FPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCE 294 (403)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~ll~~Ad~~~~~~L~~~c~~~L~~ 294 (403)
+. ++.+++.+|+.+|++|+++.|++.|++++.+
T Consensus 85 ~~------------i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 85 VE------------LQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp EE------------ECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred cC------------cCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 87 4568999999999999999999999998754
No 30
>2f1z_A Ubiquitin carboxyl-terminal hydrolase 7; hausp, USP7, UBP, deubiquitinating enzyme, substrate recognition; 3.20A {Homo sapiens}
Probab=99.73 E-value=8.7e-18 Score=169.10 Aligned_cols=125 Identities=18% Similarity=0.205 Sum_probs=95.6
Q ss_pred eeeEEEEEEcCccccccCCCCCeeecccceecCeeEEEEEEcCCCCCC-CCCceEEEEEEec----cCCcceEEEEEEEE
Q 015666 17 VNGSHQFTVKGYSLAKGMGPGKCLSSDVFTVGGYDWAIYFYPDGKNPE-DGALYVSVFIALA----SEGTDVRALFELTL 91 (403)
Q Consensus 17 ~~~~~~w~I~~fs~~~~~~~~~~~~S~~F~~~g~~W~l~~~p~g~~~~-~~~~~lslyL~~~----~~~~~v~~~~~~~l 91 (403)
..++|.|+|.||+.++. .++|++|.+||++|+|.+||+|+..+ +++ |||+||.|. +.+|.+.|+|++.|
T Consensus 29 ~~~~~~w~I~nfS~~~~-----~~~S~~F~vgg~~W~i~~yP~G~~~~~~~~-~lSlyL~~~~~~~~~~w~v~a~f~l~l 102 (522)
T 2f1z_A 29 SEATFQFTVERFSRLSE-----SVLSPPCFVRNLPWKIMVMPRFYPDRPHQK-SVGFFLQCNAESDSTSWSCHAQAVLKI 102 (522)
T ss_dssp SEEEEEEEESSCTTCCS-----CEECCCEEETTEEEEEEECBC--------C-BBCEEEEESTTCCCSSCBEEEEEEEEE
T ss_pred CCcEEEEEECChhhcCC-----ceeCCCEEECCEeeEEEEEeCCCCCCCCCC-eEEEEEEecCCCCCCCceEEEEEEEEE
Confidence 46899999999999874 78999999999999999999997543 445 999999995 34799999999999
Q ss_pred eeCCCCCccceecccccccccCCccccccCcc-Cccceeecccc--ccCcccCCCcEEEEEEeeeec
Q 015666 92 VDQSGKGKHKVHSHFDRALESGPYTLKYRGSM-GYKRFFKRTSL--ETSDYIKDDCLLINCTVGVVR 155 (403)
Q Consensus 92 l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~~fi~~~~L--~~~~~l~dd~l~i~~~v~i~~ 155 (403)
+|+.+........ ..+.|...+.. ||.+||++++| +.+|||.||+++|+|.|.|..
T Consensus 103 ~n~~~~~~~~~~~--------~~~~F~~~~~~wG~~~Fi~~~~L~~~~~g~L~nD~l~i~~~V~v~~ 161 (522)
T 2f1z_A 103 INYRDDEKSFSRR--------ISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFVQADA 161 (522)
T ss_dssp CCTTCGGGCEEEE--------CCEEECGGGCEEEESSSSBHHHHSCGGGSSCBTTBEEEEEEEEECC
T ss_pred EcCCCCccceecc--------ceeEecCCCCCcchhheeEhhHhcCcccCcccCCcEEEEEEeeccc
Confidence 9988643221111 12334333333 99999999999 468999999999999999964
No 31
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.39 E-value=1.4e-12 Score=109.74 Aligned_cols=125 Identities=14% Similarity=0.168 Sum_probs=90.8
Q ss_pred eEEEe-CCceeeeehhhhhhcCHHHHHHhcc-ccc-CCCCCcEEEcCCCHHHHHHHHHHHhcCCCCCcccccC-------
Q 015666 189 IVFEV-GDETFKAHKLILAARSPVFRAQFYG-LVG-DRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYEITG------- 258 (403)
Q Consensus 189 v~~~v-~~~~~~aHk~iLa~~S~~F~~~f~~-~~~-e~~~~~i~l~d~~~~~f~~~L~~iYt~~~~~~~~~~~------- 258 (403)
|+|.. +|+.|.||+.+ |..|+||++||.+ ++. |+....|.|++++..+++.+++|+|+..-........
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~ 81 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 81 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-----------C
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccccch
Confidence 67765 78999999999 8899999999987 666 6777789999999999999999999987332110000
Q ss_pred --CC-----CccccHHHHHHHHHHhcccChhhHHHHHHHHHHccC---ChhhHHHHHHHHHhCCCh
Q 015666 259 --TT-----SMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEEL---NAETVATTLALAEQHQCP 314 (403)
Q Consensus 259 --~~-----~~~~~~~~~~~ll~~Ad~~~~~~L~~~c~~~L~~~l---~~~n~~~~l~~A~~~~~~ 314 (403)
.. ...++.+++.+|+.+|+++++..|.++|..++...+ +++.+..++.+...+...
T Consensus 82 ~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~~d~t~e 147 (159)
T 2ast_A 82 DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEE 147 (159)
T ss_dssp CCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCCCCSCTT
T ss_pred hhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHH
Confidence 00 023678999999999999999999999999986544 555555555554444433
No 32
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.12 E-value=1.7e-10 Score=88.38 Aligned_cols=83 Identities=14% Similarity=0.307 Sum_probs=63.1
Q ss_pred eEEEe-CCceeeeehhhhhhcCHHHHHHhcc--cccCCCCCcEEEcCCCHHHHHHHHHHHh-----c---CCCCCccccc
Q 015666 189 IVFEV-GDETFKAHKLILAARSPVFRAQFYG--LVGDRNLDKVVVKDVEPSIFKAMLLFIY-----T---DKFPDVYEIT 257 (403)
Q Consensus 189 v~~~v-~~~~~~aHk~iLa~~S~~F~~~f~~--~~~e~~~~~i~l~d~~~~~f~~~L~~iY-----t---~~~~~~~~~~ 257 (403)
|+++. +|++|.|||.+ |..|++|++||.+ .+.|+....|.|+++++.+++.+++|+| + +.++.-
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~---- 78 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEF---- 78 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCC----
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcC----
Confidence 45554 78999999999 9999999999986 6778888899999999999999999999 4 333311
Q ss_pred CCCCccccHHHHHHHHHHhcccCh
Q 015666 258 GTTSMCTTTNMVQHLLAAADLYNV 281 (403)
Q Consensus 258 ~~~~~~~~~~~~~~ll~~Ad~~~~ 281 (403)
+++.+++.+|+.+|+++++
T Consensus 79 -----~i~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 79 -----PIAPEIALELLMAANFLDC 97 (97)
T ss_dssp -----CCCGGGHHHHHHHHHHHTC
T ss_pred -----cCCHHHHHHHHHHHhhhCC
Confidence 1557899999999999863
No 33
>4gwm_A Meprin A subunit beta; mulidomain structure, hydrolase; HET: NAG BMA FUC MAN; 1.85A {Homo sapiens} PDB: 4gwn_A*
Probab=99.08 E-value=6.1e-10 Score=111.33 Aligned_cols=133 Identities=25% Similarity=0.391 Sum_probs=98.5
Q ss_pred eeeeeeEEEEEEcCccccccCCCCCeeecccceec-CeeEEEEEEcCCCCCCCCCceEEEEEEeccC------CcceE-E
Q 015666 14 NETVNGSHQFTVKGYSLAKGMGPGKCLSSDVFTVG-GYDWAIYFYPDGKNPEDGALYVSVFIALASE------GTDVR-A 85 (403)
Q Consensus 14 ~~~~~~~~~w~I~~fs~~~~~~~~~~~~S~~F~~~-g~~W~l~~~p~g~~~~~~~~~lslyL~~~~~------~~~v~-~ 85 (403)
++-.+..++|+|.||+++.+- .+..+.||+|... ||.++|.+++++. + ++++|+++.++ .|++. -
T Consensus 401 t~G~CP~~vw~i~nfs~~l~~-~~~~~~Sp~Fys~~GY~~~v~l~~~~~-----~-~~~~~~~l~sG~~D~~L~WP~~~~ 473 (592)
T 4gwm_A 401 SETRCPHHIWHIRNFTQFIGS-PNGTLYSPPFYSSKGYAFQIYLNLAHV-----T-NAGIYFHLISGANDDQLQWPCPWQ 473 (592)
T ss_dssp ESSCCCSEEEEECSCGGGTTC-TTCEEECCCEECTTSCEEEEEEECCSS-----S-EEEEEEEEECCTTGGGSCSSCCSE
T ss_pred eeCCCCCCceeecCHHHhhcC-CCCceeCCCccCCCCeEEEEEEecCCC-----c-eEEEEEEEecCCCCCCccCCCCCC
Confidence 566777899999999987763 4567999999754 9999999999763 3 99999999753 69984 6
Q ss_pred EEEEEEeeCCCCCccceeccccccccc--------CCcccc-----------------ccCcc-CccceeeccccccCcc
Q 015666 86 LFELTLVDQSGKGKHKVHSHFDRALES--------GPYTLK-----------------YRGSM-GYKRFFKRTSLETSDY 139 (403)
Q Consensus 86 ~~~~~ll~~~g~~~~~~~~~~~~~~~~--------~~~~~~-----------------~~~~~-G~~~fi~~~~L~~~~~ 139 (403)
++++.|+||+.+.....+.. ++++. +...+. +++.+ ||+.||+++.|...+|
T Consensus 474 q~t~~llDQ~pd~~~rms~~--~s~ttdp~~~~~~~~~~w~~P~~~g~~~~~~~~~~~~r~~~~G~~~fish~~l~~r~f 551 (592)
T 4gwm_A 474 QATMTLLDQNPDIRQRMSNQ--RSITTDPFMTTDNGNYFWDRPSKVGTVALFSNGTQFRRGGGYGTSAFITHERLKSRDF 551 (592)
T ss_dssp EEEEEECCCCSSGGGCCCEE--EEEECCTTCBCTTSCBTTSCHHHHCEEEECTTCCEEEEEEEEEEEEEEEHHHHTSTTS
T ss_pred EEEEEEeCCCCChHhcCcee--EEEEcCCcccCcccccccCCcccccccccccCCcceeecCCcCccccccHHHHhhcCc
Confidence 79999999986554333221 22211 111121 12223 9999999999998899
Q ss_pred cCCCcEEEEEEeeeec
Q 015666 140 IKDDCLLINCTVGVVR 155 (403)
Q Consensus 140 l~dd~l~i~~~v~i~~ 155 (403)
|++|.+.|.++|+=..
T Consensus 552 iK~d~~~i~~~~eD~~ 567 (592)
T 4gwm_A 552 IKGDDVYILLTVEDIS 567 (592)
T ss_dssp SBTTBEEEEEEEEECG
T ss_pred ccCCeEEEEEEEEeCc
Confidence 9999999999986444
No 34
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.02 E-value=1.1e-09 Score=89.78 Aligned_cols=110 Identities=16% Similarity=0.190 Sum_probs=83.1
Q ss_pred eEEEe-CCceeeeehhhhhhcCHHHHHHhcccccCCCCCcEEEcCCCHHHHHHHHHHHhcCCCCCcccccC---------
Q 015666 189 IVFEV-GDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYEITG--------- 258 (403)
Q Consensus 189 v~~~v-~~~~~~aHk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~d~~~~~f~~~L~~iYt~~~~~~~~~~~--------- 258 (403)
|+|.. +|+.|.||+.+ |..|++|+.||.+. + ...|.|++++..+++.+++|+|...-........
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~---~-~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~ 78 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDL---G-MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDD 78 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHT---C-CSSEECTTCCHHHHHHHHHHHHHHTTCC---------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhc---C-CCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchhh
Confidence 66776 77999999998 78999999999753 1 4579999999999999999999865321110000
Q ss_pred CC-----CccccHHHHHHHHHHhcccChhhHHHHHHHHHHccCChhhHHH
Q 015666 259 TT-----SMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEELNAETVAT 303 (403)
Q Consensus 259 ~~-----~~~~~~~~~~~ll~~Ad~~~~~~L~~~c~~~L~~~l~~~n~~~ 303 (403)
.. ...++.+++.+|+.+|+++++..|.++|..++...+...+.-+
T Consensus 79 i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~ee 128 (141)
T 1fs1_B 79 IPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEE 128 (141)
T ss_dssp --HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHH
T ss_pred hhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHH
Confidence 00 0236778999999999999999999999999877665555443
No 35
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.81 E-value=1.1e-09 Score=91.83 Aligned_cols=119 Identities=16% Similarity=0.182 Sum_probs=59.5
Q ss_pred eEEEe-CCceeeeehhhhhhcCHHHHHHhcccccCCCCCcEEEcCCCHHHHHHHHHHHhcCCCCCccccc----------
Q 015666 189 IVFEV-GDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYEIT---------- 257 (403)
Q Consensus 189 v~~~v-~~~~~~aHk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~d~~~~~f~~~L~~iYt~~~~~~~~~~---------- 257 (403)
|+|.. +|+.|.||+.+ |..|++|+.||.+.. ....|.|++++..+++.+++|+|...........
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~ 81 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC---VDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDD 81 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC---------------CCTTSCHHHHHHHHHC-----------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC---CCCceeCCcCcHHHHHHHHHHHHHcccCCCcccccccccccccc
Confidence 56664 78999999998 789999999997642 3457999999999999999999987632110000
Q ss_pred ---CC--CCccccHHHHHHHHHHhcccChhhHHHHHHHHHHccC---ChhhHHHHHHHHHhC
Q 015666 258 ---GT--TSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEEL---NAETVATTLALAEQH 311 (403)
Q Consensus 258 ---~~--~~~~~~~~~~~~ll~~Ad~~~~~~L~~~c~~~L~~~l---~~~n~~~~l~~A~~~ 311 (403)
.. ....++.+++.+|+.+|+++++..|.++|..++...+ +++.+..++.++..+
T Consensus 82 ~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd~ 143 (160)
T 2p1m_A 82 DLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDF 143 (160)
T ss_dssp -------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCCCC
T ss_pred hhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCC
Confidence 00 0013567889999999999999999999999998877 555555555544443
No 36
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=98.45 E-value=9.1e-07 Score=68.64 Aligned_cols=95 Identities=18% Similarity=0.255 Sum_probs=75.3
Q ss_pred ceEEEeCCceeeeehhhhhhcC-HHHHHHhccccc----CCCCCcEEEcCCCHHHHHHHHHHHhcCCCCCcccccCCCCc
Q 015666 188 DIVFEVGDETFKAHKLILAARS-PVFRAQFYGLVG----DRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYEITGTTSM 262 (403)
Q Consensus 188 Dv~~~v~~~~~~aHk~iLa~~S-~~F~~~f~~~~~----e~~~~~i~l~d~~~~~f~~~L~~iYt~~~~~~~~~~~~~~~ 262 (403)
-|.|.|||+.|...+..|+... .+|.+||.+... ....+++-+ |-++..|+.+|+|+.+|.+..+..
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~~IL~~lr~g~l~~p~~------- 78 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKD------- 78 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHHHHHHHHHHSCCCCCTT-------
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChHHHHHHHHHhCCCeeCCCCC-------
Confidence 4788899999999999999775 488999875421 123345555 789999999999999999865431
Q ss_pred cccHHHHHHHHHHhcccChhhHHHHHHHHHHc
Q 015666 263 CTTTNMVQHLLAAADLYNVDRLKLLCESKLCE 294 (403)
Q Consensus 263 ~~~~~~~~~ll~~Ad~~~~~~L~~~c~~~L~~ 294 (403)
.....++.-|++|+++.|++.|++.|.+
T Consensus 79 ----~~~~~l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 79 ----LAEEGVLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp ----SCHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 1246789999999999999999998754
No 37
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.39 E-value=1.1e-06 Score=67.12 Aligned_cols=92 Identities=16% Similarity=0.209 Sum_probs=68.5
Q ss_pred ceEEEe-CCceeeeehhhhhhcCHHHHHHhcccccCCCCCcEEEcCCCHHHHHHHHHHHhcCCCCCccc--ccCCCCccc
Q 015666 188 DIVFEV-GDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYE--ITGTTSMCT 264 (403)
Q Consensus 188 Dv~~~v-~~~~~~aHk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~d~~~~~f~~~L~~iYt~~~~~~~~--~~~~~~~~~ 264 (403)
-|+|.. +|+.|.+++.+ |..|.+++.|+.+++ +.....|.|++++...++.+++|+|...-..... ...-+.-.+
T Consensus 5 ~v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~v 82 (99)
T 1hv2_A 5 FVTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-RESKGRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEFEI 82 (99)
T ss_dssp EEEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-TTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCCCC
T ss_pred EEEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-ccCCCceecCCcCHHHHHHHHHHHHHhcccCCCccccccCCCccC
Confidence 366665 88999999997 889999999998755 5555789999999999999999998744110000 000011136
Q ss_pred cHHHHHHHHHHhcccCh
Q 015666 265 TTNMVQHLLAAADLYNV 281 (403)
Q Consensus 265 ~~~~~~~ll~~Ad~~~~ 281 (403)
..+.+.+|+.+|+++++
T Consensus 83 d~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 83 PTEMSLELLLAADYLSI 99 (99)
T ss_dssp CHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 78899999999999874
No 38
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.34 E-value=2.9e-06 Score=71.44 Aligned_cols=119 Identities=17% Similarity=0.220 Sum_probs=82.0
Q ss_pred ceEEEe-CCceeeeehhhhhhcCHHHHHHhccccc----CCCCCcEEEcCCCHHHHHHHHHHHhcCCCCCccc---c---
Q 015666 188 DIVFEV-GDETFKAHKLILAARSPVFRAQFYGLVG----DRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYE---I--- 256 (403)
Q Consensus 188 Dv~~~v-~~~~~~aHk~iLa~~S~~F~~~f~~~~~----e~~~~~i~l~d~~~~~f~~~L~~iYt~~~~~~~~---~--- 256 (403)
-|+|+. +|+.|.+++.+ |.+|..++.|+...-. +.....|.|++++..+++.+++|++...-..... .
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~~~~~ 86 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSR 86 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC-------
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCccccccccc
Confidence 466664 67899999998 6799999999964322 2334679999999999999999997654321100 0
Q ss_pred -cCC-C-----CccccHHHHHHHHHHhcccChhhHHHHHHHHHHcc---CChhhHHHHHHH
Q 015666 257 -TGT-T-----SMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEE---LNAETVATTLAL 307 (403)
Q Consensus 257 -~~~-~-----~~~~~~~~~~~ll~~Ad~~~~~~L~~~c~~~L~~~---l~~~n~~~~l~~ 307 (403)
... . ...+....+.+|+.+|+++++..|.++|+..+... .+++-+..++.+
T Consensus 87 ~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgktpeeiR~~f~I 147 (169)
T 3v7d_A 87 KSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNI 147 (169)
T ss_dssp -CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCHHHHHHHHTC
T ss_pred ccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCHHHHHHHcCC
Confidence 000 0 01356789999999999999999999999988543 444444444443
No 39
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.30 E-value=6.4e-07 Score=68.01 Aligned_cols=91 Identities=12% Similarity=0.188 Sum_probs=62.7
Q ss_pred eEEEe-CCceeeeehhhhhhcCHHHHHHhcc--cccCCCCCcEEEcCCCHHHHHHHHHHHhcCCCCCcccccCCCCcccc
Q 015666 189 IVFEV-GDETFKAHKLILAARSPVFRAQFYG--LVGDRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYEITGTTSMCTT 265 (403)
Q Consensus 189 v~~~v-~~~~~~aHk~iLa~~S~~F~~~f~~--~~~e~~~~~i~l~d~~~~~f~~~L~~iYt~~~~~~~~~~~~~~~~~~ 265 (403)
|++.. +|+.|.+++.+ |..|++++.|+.+ .+.|.....|.|++++..+++.+++|+|...-..... ...+.-.+.
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~-~~i~~w~vd 80 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSS-TEIPEFPIA 80 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHHHHHSCC-SCCCCCCCC
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHccccCCCc-ccCCCcccC
Confidence 45665 78999999997 7899999999974 3456666789999999999999999998643110000 000011256
Q ss_pred HHHHHHHHHHhcccCh
Q 015666 266 TNMVQHLLAAADLYNV 281 (403)
Q Consensus 266 ~~~~~~ll~~Ad~~~~ 281 (403)
.+.+.+|+.+|+++++
T Consensus 81 ~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 81 PEIALELLMAANFLDC 96 (96)
T ss_dssp TTTHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCc
Confidence 6789999999998864
No 40
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.96 E-value=1.5e-05 Score=62.07 Aligned_cols=92 Identities=12% Similarity=0.176 Sum_probs=63.2
Q ss_pred ceEEE-eCCceeeeehhhhhhcCHHHHHHhcc--cccCCCCCcEEEcCCCHHHHHHHHHHHhcCCCCCcccccCCCCccc
Q 015666 188 DIVFE-VGDETFKAHKLILAARSPVFRAQFYG--LVGDRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYEITGTTSMCT 264 (403)
Q Consensus 188 Dv~~~-v~~~~~~aHk~iLa~~S~~F~~~f~~--~~~e~~~~~i~l~d~~~~~f~~~L~~iYt~~~~~~~~~~~~~~~~~ 264 (403)
-|+|. .+|..|.+++.+ |.+|+.++.|+.. .+.|.....|.|++++..+++.+++|++...-..... ...+.-.+
T Consensus 18 ~v~L~SsDG~~F~V~~~~-A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~-~~i~~w~v 95 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSS-TEIPEFPI 95 (112)
T ss_dssp EEEEECTTSCEEEEEHHH-HHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHHHHSSCS-SCCCCCCC
T ss_pred EEEEEcCCCCEEEECHHH-HHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccCCc-CCCCCccc
Confidence 36666 478999999995 6799999999974 3456556789999999999999999997643110000 00011136
Q ss_pred cHHHHHHHHHHhcccCh
Q 015666 265 TTNMVQHLLAAADLYNV 281 (403)
Q Consensus 265 ~~~~~~~ll~~Ad~~~~ 281 (403)
..+.+.+|+.+|+++++
T Consensus 96 d~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 96 APEIALELLMAANFLDC 112 (112)
T ss_dssp CHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 77899999999999874
No 41
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.86 E-value=9.4e-06 Score=62.70 Aligned_cols=59 Identities=22% Similarity=0.389 Sum_probs=52.1
Q ss_pred HccCChhhHHHHHHHHHhCCChHHHHHHHHHhcCCCChHHHHcccchhHHHhhCcHHHHHHHHH
Q 015666 293 CEELNAETVATTLALAEQHQCPQLKAICLKFAATPANLGVIMQSEGFKHLEESCPSLLSELLKT 356 (403)
Q Consensus 293 ~~~l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~~~~~~~~~f~~l~~~~p~l~~ell~~ 356 (403)
.+.++++||+.++.+|+.|++..|++.|.+||. .||.++..+++|.+|+. +.+.++|..
T Consensus 5 ~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~--~nF~~v~~~~eFl~L~~---~~L~~lL~s 63 (105)
T 2eqx_A 5 SSGVQVGNCLQVMWLADRHSDPELYTAAKHCAK--THLAQLQNTEEFLHLPH---RLLTDIISD 63 (105)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHH--HTCHHHHTSHHHHHSCH---HHHHHHHHT
T ss_pred hccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH--HHHHHHHhcccHhhCCH---HHHHHHHcC
Confidence 456899999999999999999999999999999 99999999999999874 366666654
No 42
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=97.53 E-value=0.00016 Score=61.84 Aligned_cols=95 Identities=18% Similarity=0.261 Sum_probs=73.6
Q ss_pred ceEEEeCCceeeeehhhhhhcC-HHHHHHhccccc----CCCCCcEEEcCCCHHHHHHHHHHHhcCCCCCcccccCCCCc
Q 015666 188 DIVFEVGDETFKAHKLILAARS-PVFRAQFYGLVG----DRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYEITGTTSM 262 (403)
Q Consensus 188 Dv~~~v~~~~~~aHk~iLa~~S-~~F~~~f~~~~~----e~~~~~i~l~d~~~~~f~~~L~~iYt~~~~~~~~~~~~~~~ 262 (403)
=|.|.|||..|...+..|.... .+|..||.+... ....+++-| |-++..|+.+|+|+.+|.+..+..
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRDP~~F~~ILnyLRtG~L~lP~~------- 84 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKD------- 84 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSCSTTHHHHHHHHHHSCCCCCTT-------
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCChHHHHHHHHHhcCCccCCCCC-------
Confidence 4778899999999999999764 378888875421 112344544 789999999999999999875432
Q ss_pred cccHHHHHHHHHHhcccChhhHHHHHHHHHHc
Q 015666 263 CTTTNMVQHLLAAADLYNVDRLKLLCESKLCE 294 (403)
Q Consensus 263 ~~~~~~~~~ll~~Ad~~~~~~L~~~c~~~L~~ 294 (403)
+ ....++.-|++|+++.|.+.|.+.|.+
T Consensus 85 -~---~~~~l~eEA~FygL~~Lv~~l~~~i~e 112 (202)
T 3drx_A 85 -L---AEEGVLEEAEFYNITSLIKLVKDKIRE 112 (202)
T ss_dssp -S---CHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -C---CHHHHHHHHHHCCcHHHHHHHHHHHHH
Confidence 1 135689999999999999999998864
No 43
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=96.01 E-value=0.0017 Score=50.62 Aligned_cols=95 Identities=14% Similarity=0.219 Sum_probs=65.7
Q ss_pred ceEEEeCCceeeeehhhhhhcC-HHHHHHhcccc-cCCCCCcEEEcCCCHHHHHHHHHHHhcCCCCCcccccCCCCcccc
Q 015666 188 DIVFEVGDETFKAHKLILAARS-PVFRAQFYGLV-GDRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYEITGTTSMCTT 265 (403)
Q Consensus 188 Dv~~~v~~~~~~aHk~iLa~~S-~~F~~~f~~~~-~e~~~~~i~l~d~~~~~f~~~L~~iYt~~~~~~~~~~~~~~~~~~ 265 (403)
=|+|.|||..|...+..|+... ..+.+|+.+.. .....+++-+ |-++..|+.+|.|+.+|.+..+..
T Consensus 6 ~V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnylR~G~l~~p~~---------- 74 (115)
T 3kvt_A 6 RVIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF-DRHPGVFAQIINYYRSGKLHYPTD---------- 74 (115)
T ss_dssp EEEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE-CSCTTTHHHHHHHHHHSCBCCCSS----------
T ss_pred EEEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE-ecChHHHHHHHHHhcCCCCCCCCc----------
Confidence 4788999999999999998764 24555654321 1123345544 689999999999999998865431
Q ss_pred HHHHHHHHHHhcccChhhHHH--HHHHHHHc
Q 015666 266 TNMVQHLLAAADLYNVDRLKL--LCESKLCE 294 (403)
Q Consensus 266 ~~~~~~ll~~Ad~~~~~~L~~--~c~~~L~~ 294 (403)
..+..++.-|++|+++...- -|...+.+
T Consensus 75 -~~~~~~~~Ea~fy~i~~~~l~~CC~~~~~~ 104 (115)
T 3kvt_A 75 -VCGPLFEEELEFWGLDSNQVEPCCWMTYTA 104 (115)
T ss_dssp -SCHHHHHHHHHHHTCCGGGBCGGGSHHHHS
T ss_pred -ccHHHHHHHHHHhCCChHHHHHHHHHHHHh
Confidence 12568889999999976532 24444443
No 44
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=95.57 E-value=0.015 Score=45.84 Aligned_cols=91 Identities=15% Similarity=0.182 Sum_probs=63.7
Q ss_pred CceEEEeCCceeeeehhhhhhcCHHHHHHhccc----ccCCCCCcEEEcCCCHHHHHHHHHHHhcCCCCCcccccCCCCc
Q 015666 187 CDIVFEVGDETFKAHKLILAARSPVFRAQFYGL----VGDRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYEITGTTSM 262 (403)
Q Consensus 187 ~Dv~~~v~~~~~~aHk~iLa~~S~~F~~~f~~~----~~e~~~~~i~l~d~~~~~f~~~L~~iYt~~~~~~~~~~~~~~~ 262 (403)
.-|+|.|||..|...+..|..... ++|... ......+++-+ |-++..|+.+|.|+-+|.+..+..
T Consensus 13 ~~V~LNVGG~~F~t~~~TL~~~p~---S~L~~~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnflR~G~l~~p~~------- 81 (124)
T 1s1g_A 13 ELIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRY------- 81 (124)
T ss_dssp CEEEEEETTEEEEEEHHHHTTSTT---SSTTSSGGGGTBCSSSCSEEE-CSCHHHHHHHHHHHHHSCBCCCTT-------
T ss_pred CEEEEEeCCEEEEEeHHHHhcCCC---ceecccCCcccccCCCCcEEE-cCChHHHHHHHHHHhcCCCCCCCC-------
Confidence 458888999999999999986532 233221 11223345555 679999999999999998874431
Q ss_pred cccHHHHHHHHHHhcccChhhHH--HHHHHHH
Q 015666 263 CTTTNMVQHLLAAADLYNVDRLK--LLCESKL 292 (403)
Q Consensus 263 ~~~~~~~~~ll~~Ad~~~~~~L~--~~c~~~L 292 (403)
..+..++.-|++|+++.+. ..|...+
T Consensus 82 ----~~~~~l~~Ea~fy~i~~l~l~~cC~~~~ 109 (124)
T 1s1g_A 82 ----ECISAYDDELAFYGILPEIIGDCCYEEY 109 (124)
T ss_dssp ----SCHHHHHHHHHHTTCCGGGBCHHHHHHH
T ss_pred ----cCHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 1367899999999998763 3444444
No 45
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=95.14 E-value=0.014 Score=44.09 Aligned_cols=85 Identities=13% Similarity=0.142 Sum_probs=59.9
Q ss_pred eEEEeCCceeeeehhhhhhcCH-HHHHHhcc-cccCCCCCcEEEcCCCHHHHHHHHHHHhc-CCCCCcccccCCCCcccc
Q 015666 189 IVFEVGDETFKAHKLILAARSP-VFRAQFYG-LVGDRNLDKVVVKDVEPSIFKAMLLFIYT-DKFPDVYEITGTTSMCTT 265 (403)
Q Consensus 189 v~~~v~~~~~~aHk~iLa~~S~-~F~~~f~~-~~~e~~~~~i~l~d~~~~~f~~~L~~iYt-~~~~~~~~~~~~~~~~~~ 265 (403)
|+|.|+|..|...+..|+..-. .+.+|+.. .......+++-+ |-++..|+.+|.|+.+ |.+..+..
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi-DRdp~~F~~ILnflR~~G~l~~p~~---------- 71 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF-DRNRPSFDAILYFYQSGGRLRRPVN---------- 71 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE-CSCSTTHHHHHHHHHTTSCCCCCTT----------
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEE-cCChHHHHHHHHHHhcCCcccCCCC----------
Confidence 6889999999999999975521 23333321 111223455655 7799999999999998 78764431
Q ss_pred HHHHHHHHHHhcccChhhHH
Q 015666 266 TNMVQHLLAAADLYNVDRLK 285 (403)
Q Consensus 266 ~~~~~~ll~~Ad~~~~~~L~ 285 (403)
..+..++.-|++|+++.+.
T Consensus 72 -~~~~~~~~Ea~fy~i~~~~ 90 (100)
T 1t1d_A 72 -VPLDVFSEEIKFYELGENA 90 (100)
T ss_dssp -SCHHHHHHHHHHTTCCHHH
T ss_pred -CCHHHHHHHHHHcCCCHHH
Confidence 1357889999999997654
No 46
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=94.68 E-value=0.03 Score=45.05 Aligned_cols=84 Identities=15% Similarity=0.181 Sum_probs=60.4
Q ss_pred CCceEEEeCCceeeeehhhhhhcCHHHHHHhcccc----cCCCCCcEEEcCCCHHHHHHHHHHHhcCCCCCcccccCCCC
Q 015666 186 GCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLV----GDRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYEITGTTS 261 (403)
Q Consensus 186 ~~Dv~~~v~~~~~~aHk~iLa~~S~~F~~~f~~~~----~e~~~~~i~l~d~~~~~f~~~L~~iYt~~~~~~~~~~~~~~ 261 (403)
..-|+|.|||..|...+..|.... .+||...- .....+++-+ |-++..|+.+|+|+-+|.+..+..
T Consensus 34 ~~~V~LNVGG~~F~T~~~TL~~~P---~S~L~~~~~~~~~~~~~g~yFi-DRdp~~F~~ILnflR~G~l~~p~~------ 103 (140)
T 2nz0_B 34 DELIVLNVSGRRFQTWRTTLERYP---DTLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRY------ 103 (140)
T ss_dssp CCEEEEEETTEEEEEEHHHHHTCT---TSTTTSGGGGGSEETTTTEEEE-CSCHHHHHHHHHHHHHSSBCCCTT------
T ss_pred CCEEEEEECCEEEEeeHHHHhcCC---CeeecccCCcccccCCCCeEEE-eCCcHHHHHHHHHHhcCCcCCCCC------
Confidence 345888899999999999998653 23443211 1122344444 679999999999999998874431
Q ss_pred ccccHHHHHHHHHHhcccChhhH
Q 015666 262 MCTTTNMVQHLLAAADLYNVDRL 284 (403)
Q Consensus 262 ~~~~~~~~~~ll~~Ad~~~~~~L 284 (403)
..+..++.-|++|+++.+
T Consensus 104 -----~~~~~l~eEa~fy~i~~l 121 (140)
T 2nz0_B 104 -----ECISAYDDELAFYGILPE 121 (140)
T ss_dssp -----SCHHHHHHHHHHHTCCGG
T ss_pred -----cCHHHHHHHHHHcCCChH
Confidence 136788999999999876
No 47
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=94.33 E-value=0.015 Score=44.36 Aligned_cols=81 Identities=16% Similarity=0.184 Sum_probs=58.1
Q ss_pred eEEEeCCceeeeehhhhhhcCHHHHHHhcccc----cCCCCCcEEEcCCCHHHHHHHHHHHhcCCCCCcccccCCCCccc
Q 015666 189 IVFEVGDETFKAHKLILAARSPVFRAQFYGLV----GDRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYEITGTTSMCT 264 (403)
Q Consensus 189 v~~~v~~~~~~aHk~iLa~~S~~F~~~f~~~~----~e~~~~~i~l~d~~~~~f~~~L~~iYt~~~~~~~~~~~~~~~~~ 264 (403)
|+|.|||..|...+..|..... +||.... .....+++-+ |-++..|+.+|+|+-+|.+..+..
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~Fi-DRdp~~F~~ILnflR~g~l~~p~~--------- 68 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFF-DRDPDIFRHILNFYRTGKLHYPRH--------- 68 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEE-CSCTTTHHHHHHHHHHSCBCCCTT---------
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEE-eCCcHHHHHHHHHHhcCCCCCCCC---------
Confidence 6899999999999999986532 2333210 1112344444 679999999999999998864431
Q ss_pred cHHHHHHHHHHhcccChhhH
Q 015666 265 TTNMVQHLLAAADLYNVDRL 284 (403)
Q Consensus 265 ~~~~~~~ll~~Ad~~~~~~L 284 (403)
..+..++.-|++|+++.+
T Consensus 69 --~~~~~l~~Ea~fy~i~~l 86 (105)
T 1nn7_A 69 --ECISAYDEELAFFGLIPE 86 (105)
T ss_dssp --SCHHHHHHHHHHHTCCSC
T ss_pred --cCHHHHHHHHHHcCCCHH
Confidence 136788999999999876
No 48
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.53 E-value=1.4 Score=33.11 Aligned_cols=32 Identities=9% Similarity=-0.076 Sum_probs=29.3
Q ss_pred ccHHHHHHHHHHhcccChhhHHHHHHHHHHcc
Q 015666 264 TTTNMVQHLLAAADLYNVDRLKLLCESKLCEE 295 (403)
Q Consensus 264 ~~~~~~~~ll~~Ad~~~~~~L~~~c~~~L~~~ 295 (403)
++.+|...++.+|+.|+++.|+..|..++.++
T Consensus 8 L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~n 39 (105)
T 2eqx_A 8 VQVGNCLQVMWLADRHSDPELYTAAKHCAKTH 39 (105)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999999999765
No 49
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=78.87 E-value=1.1 Score=33.59 Aligned_cols=30 Identities=37% Similarity=0.546 Sum_probs=28.2
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHHhc
Q 015666 296 LNAETVATTLALAEQHQCPQLKAICLKFAA 325 (403)
Q Consensus 296 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 325 (403)
++.+++..++.+|+.|+++.|++.|.+|+.
T Consensus 77 ~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~ 106 (109)
T 2vkp_A 77 LEADTVLATLYAAKKYIVPALAKACVNFLE 106 (109)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 577899999999999999999999999987
No 50
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=72.90 E-value=2.6 Score=33.15 Aligned_cols=34 Identities=18% Similarity=0.303 Sum_probs=28.6
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHHhcCCCChH
Q 015666 296 LNAETVATTLALAEQHQCPQLKAICLKFAATPANLG 331 (403)
Q Consensus 296 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~~ 331 (403)
++.+++..++..|+.|..+.|++.|.+|+. +++.
T Consensus 87 i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~--~~l~ 120 (135)
T 2yy9_A 87 LTSGNRDQVLLAAKELRVPEAVELCQSFQP--QTSV 120 (135)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHCCC------
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHH--Hhcc
Confidence 677899999999999999999999999998 6643
No 51
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=71.91 E-value=2.5 Score=33.30 Aligned_cols=33 Identities=15% Similarity=0.296 Sum_probs=30.2
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHHhcCCCCh
Q 015666 296 LNAETVATTLALAEQHQCPQLKAICLKFAATPANL 330 (403)
Q Consensus 296 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~ 330 (403)
++.+|+..++..|..++.+.|++.|.+|+. .++
T Consensus 101 i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~--~~l 133 (138)
T 2z8h_A 101 LSKDNVDEVCRCVEFLSVHNIEESCFQFLK--FKF 133 (138)
T ss_dssp CCTTTHHHHHHHHHHHTCGGGHHHHHHHTT--CCC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHH--Hhc
Confidence 677899999999999999999999999998 554
No 52
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=71.43 E-value=3.9 Score=31.20 Aligned_cols=30 Identities=27% Similarity=0.371 Sum_probs=28.1
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHHhc
Q 015666 296 LNAETVATTLALAEQHQCPQLKAICLKFAA 325 (403)
Q Consensus 296 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 325 (403)
++.+|+..++..|..+..+.|++.|.+|+.
T Consensus 88 i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 88 LSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 677899999999999999999999999986
No 53
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=70.44 E-value=3.9 Score=40.22 Aligned_cols=86 Identities=12% Similarity=0.121 Sum_probs=58.3
Q ss_pred ceEEEeCCceeeeehhhhhhcCH-HHHHHhc-ccccCCCCCcEEEcCCCHHHHHHHHHHHhc-CCCCCcccccCCCCccc
Q 015666 188 DIVFEVGDETFKAHKLILAARSP-VFRAQFY-GLVGDRNLDKVVVKDVEPSIFKAMLLFIYT-DKFPDVYEITGTTSMCT 264 (403)
Q Consensus 188 Dv~~~v~~~~~~aHk~iLa~~S~-~F~~~f~-~~~~e~~~~~i~l~d~~~~~f~~~L~~iYt-~~~~~~~~~~~~~~~~~ 264 (403)
-|+|.|||..|...+..|+..-. .+..++. ........+++-+ |=++..|+.+|.|+.+ |.+..+..
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~-DR~~~~F~~IL~~~r~~g~l~~p~~--------- 122 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFF-DRNRPSFDAILYYYQSGGRLRRPVN--------- 122 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEE-CSCHHHHHHHHHHHHHTSCCCCCTT---------
T ss_pred EEEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEE-cCChHHHHHHHHHHhcCCccccCCc---------
Confidence 47888999999999999975421 1111111 1112234455655 7899999999999999 88764431
Q ss_pred cHHHHHHHHHHhcccChhhHH
Q 015666 265 TTNMVQHLLAAADLYNVDRLK 285 (403)
Q Consensus 265 ~~~~~~~ll~~Ad~~~~~~L~ 285 (403)
.....+++-|++|+++.+.
T Consensus 123 --~~~~~~~~E~~f~~i~~~~ 141 (514)
T 2r9r_B 123 --VPLDIFSEEIRFYELGEEA 141 (514)
T ss_dssp --SCHHHHHHHHHHTTCCHHH
T ss_pred --ccHHHHHHHHHhcCCCHHH
Confidence 1245778889999997654
No 54
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=70.38 E-value=4.3 Score=31.27 Aligned_cols=30 Identities=23% Similarity=0.309 Sum_probs=28.2
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHHhc
Q 015666 296 LNAETVATTLALAEQHQCPQLKAICLKFAA 325 (403)
Q Consensus 296 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 325 (403)
++.+++..++..|..+..+.|++.|.+|+.
T Consensus 95 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~ 124 (127)
T 1r29_A 95 LREGNIMAVMATAMYLQMEHVVDTCRKFIK 124 (127)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 567899999999999999999999999997
No 55
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=69.35 E-value=4.7 Score=30.50 Aligned_cols=30 Identities=13% Similarity=0.098 Sum_probs=27.9
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHHhc
Q 015666 296 LNAETVATTLALAEQHQCPQLKAICLKFAA 325 (403)
Q Consensus 296 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 325 (403)
++.+++..++..|..++.+.|++.|.+|+.
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 86 LDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 567899999999999999999999999986
No 56
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=67.90 E-value=3.9 Score=31.20 Aligned_cols=30 Identities=20% Similarity=0.388 Sum_probs=27.4
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHHhc
Q 015666 296 LNAETVATTLALAEQHQCPQLKAICLKFAA 325 (403)
Q Consensus 296 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 325 (403)
++.+|+..++..|+.++.+.|++.|.+|+.
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (119)
T 3b84_A 86 LTSGNRDQVLLAARELRVPEAVELCQSFKP 115 (119)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHCC-
T ss_pred cCHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 567899999999999999999999999987
No 57
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=66.78 E-value=6.3 Score=29.91 Aligned_cols=29 Identities=17% Similarity=0.393 Sum_probs=27.1
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHHh
Q 015666 296 LNAETVATTLALAEQHQCPQLKAICLKFA 324 (403)
Q Consensus 296 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i 324 (403)
++.+++..++..|..|+.+.|++.|.+|+
T Consensus 91 ~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 91 VSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp CCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 56789999999999999999999999987
No 58
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=63.32 E-value=3.9 Score=33.30 Aligned_cols=31 Identities=23% Similarity=0.190 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhcccChhhHHHHHHHHHHccC
Q 015666 266 TNMVQHLLAAADLYNVDRLKLLCESKLCEEL 296 (403)
Q Consensus 266 ~~~~~~ll~~Ad~~~~~~L~~~c~~~L~~~l 296 (403)
.+++..++.+|+.|+++.|+..|.++|.+++
T Consensus 134 ~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~ 164 (172)
T 3htm_A 134 VENAAEILILADLHSADQLKTQAVDFINYHA 164 (172)
T ss_dssp TTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 4689999999999999999999999998764
No 59
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=62.43 E-value=6.8 Score=29.85 Aligned_cols=30 Identities=30% Similarity=0.328 Sum_probs=28.0
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHHhc
Q 015666 296 LNAETVATTLALAEQHQCPQLKAICLKFAA 325 (403)
Q Consensus 296 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 325 (403)
++.+++..++..|+.+..+.|++.|.+|+.
T Consensus 89 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~ 118 (121)
T 1buo_A 89 AKAEDLDDLLYAAEILEIEYLEEQCLKMLE 118 (121)
T ss_dssp CCGGGHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 567899999999999999999999999986
No 60
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=61.70 E-value=5.1 Score=31.80 Aligned_cols=29 Identities=28% Similarity=0.500 Sum_probs=27.0
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHHh
Q 015666 296 LNAETVATTLALAEQHQCPQLKAICLKFA 324 (403)
Q Consensus 296 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i 324 (403)
++.+++..++.+|..|..+.|++.|.+|+
T Consensus 115 i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 115 LNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 57789999999999999999999999886
No 61
>3v0r_A Major allergen ALT A 1; beta-barrel, cell WALL, unknown function; HET: 0FU 8AC; 1.90A {Alternaria alternata}
Probab=56.08 E-value=2.4 Score=32.91 Aligned_cols=29 Identities=17% Similarity=0.258 Sum_probs=22.8
Q ss_pred eeeEEEEEEcCccccccCCCCCeeeccccee
Q 015666 17 VNGSHQFTVKGYSLAKGMGPGKCLSSDVFTV 47 (403)
Q Consensus 17 ~~~~~~w~I~~fs~~~~~~~~~~~~S~~F~~ 47 (403)
.+|-++|+|.+|+..| ++|..+.|=-|.+
T Consensus 10 ~~gd~vwkIs~F~~RK--peGty~nsvsFnI 38 (133)
T 3v0r_A 10 TEGDYVWKISEFYGRK--PEGTYYNSLGFNI 38 (133)
T ss_dssp CCCTTEEEEEEEEEEE--TTSSSCSEEEEEE
T ss_pred cCCceEEEeeeeeeEc--CCCCceeeEEEEE
Confidence 5788999999999866 5777777766654
No 62
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=54.94 E-value=11 Score=28.82 Aligned_cols=30 Identities=13% Similarity=0.185 Sum_probs=27.4
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHHhc
Q 015666 296 LNAETVATTLALAEQHQCPQLKAICLKFAA 325 (403)
Q Consensus 296 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 325 (403)
++.+|+..++..|+.+..+.|++.|.+++.
T Consensus 87 i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~ 116 (119)
T 3m5b_A 87 LQPGELRPLQEAARALGVQSLEEACWRARG 116 (119)
T ss_dssp ECGGGHHHHHHHHHHTTCHHHHHHHHHHC-
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 578899999999999999999999999986
No 63
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=49.17 E-value=9 Score=29.96 Aligned_cols=30 Identities=20% Similarity=0.198 Sum_probs=25.9
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHHhc
Q 015666 296 LNAETVATTLALAEQHQCPQLKAICLKFAA 325 (403)
Q Consensus 296 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 325 (403)
++.+++..++.+|..|..+.|+..|.+++.
T Consensus 91 ~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~ 120 (145)
T 4eoz_A 91 NLDKMADDLLAAADKYALERLKVMCEDALC 120 (145)
T ss_dssp TGGGTHHHHHHHHHHTTCHHHHHHHHCC--
T ss_pred CcHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 456789999999999999999999999998
No 64
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=48.01 E-value=14 Score=33.29 Aligned_cols=28 Identities=21% Similarity=0.284 Sum_probs=26.2
Q ss_pred hhhHHHHHHHHHhCCChHHHHHHHHHhc
Q 015666 298 AETVATTLALAEQHQCPQLKAICLKFAA 325 (403)
Q Consensus 298 ~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 325 (403)
.+++..++.+|+.|+.+.|+..|.+++.
T Consensus 242 ~~~~~~ll~~A~~~~~~~l~~~c~~~l~ 269 (312)
T 3hqi_A 242 DKMADDLLAAADKYALERLKVMCEDALC 269 (312)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 3688999999999999999999999997
No 65
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=40.55 E-value=5 Score=31.02 Aligned_cols=31 Identities=13% Similarity=0.023 Sum_probs=23.2
Q ss_pred cCChhhHHHHHHHHHhCCChHHHHHHHHHhc
Q 015666 295 ELNAETVATTLALAEQHQCPQLKAICLKFAA 325 (403)
Q Consensus 295 ~l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 325 (403)
.++.+++..++..|..+..+.|++.|.+|+.
T Consensus 95 ~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~ 125 (129)
T 3ga1_A 95 SMNVGDQDLLMYTAGFLQIQEIMEKGTEFFL 125 (129)
T ss_dssp ECCTTTHHHHHHHHHHTTBTTSSCC------
T ss_pred ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3678899999999999999999999999997
No 66
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=38.52 E-value=37 Score=29.45 Aligned_cols=30 Identities=27% Similarity=0.483 Sum_probs=27.5
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHHhc
Q 015666 296 LNAETVATTLALAEQHQCPQLKAICLKFAA 325 (403)
Q Consensus 296 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 325 (403)
++.+++..++..|..+..+.|+..|.+|+.
T Consensus 99 i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~ 128 (256)
T 3hve_A 99 LNEDTIQDVVQAADLLLLTDLKTLCCEFLE 128 (256)
T ss_dssp CC-CCHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred ccHhHHHHHHHHHHHHChHHHHHHHHHHHH
Confidence 677899999999999999999999999997
No 67
>2plx_B Peptide inhibitor; helix-turn-helix, hydrolase; HET: FLC; 1.56A {Bos taurus}
Probab=37.02 E-value=37 Score=17.45 Aligned_cols=22 Identities=27% Similarity=0.560 Sum_probs=18.1
Q ss_pred HHHHHHHhCCChHHHHHHHHHh
Q 015666 303 TTLALAEQHQCPQLKAICLKFA 324 (403)
Q Consensus 303 ~~l~~A~~~~~~~L~~~~~~~i 324 (403)
.++.+|..+..++|...|++-.
T Consensus 3 kvmcyaqrhsspellrrcldnc 24 (26)
T 2plx_B 3 KVMCYAQRHSSPELLRRCLDNC 24 (26)
T ss_dssp HHHHHHBCCCCHHHHHHHHHHH
T ss_pred eEEeehhhcCCHHHHHHHHhcc
Confidence 4667888999999999998764
No 68
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=35.60 E-value=40 Score=27.04 Aligned_cols=60 Identities=12% Similarity=0.106 Sum_probs=42.3
Q ss_pred ccHHHHHHHHHHhcccCh---------------hhHHHHHHHHHHccCChhhHHHHHHHHHhCCChHHHHHHHHHhc
Q 015666 264 TTTNMVQHLLAAADLYNV---------------DRLKLLCESKLCEELNAETVATTLALAEQHQCPQLKAICLKFAA 325 (403)
Q Consensus 264 ~~~~~~~~ll~~Ad~~~~---------------~~L~~~c~~~L~~~l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 325 (403)
++...+..++..+.+..- ..+..--.+|+ .++.+++..++..|...+...|.+.|.++++
T Consensus 49 V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~--~id~~~l~eLl~AAnyL~I~~Lld~~c~~va 123 (159)
T 2ast_A 49 VNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFL--KVDQGTLFELILAANYLDIKGLLDVTCKTVA 123 (159)
T ss_dssp SCHHHHHHHHHHHHHTTTCCC-----------CCCCCHHHHHHT--CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCcCCCCcccccccccchhhhhHHHHHHH--cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 455666666666654431 11222233344 3789999999999999999999999999997
No 69
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=31.84 E-value=3.6 Score=31.64 Aligned_cols=30 Identities=20% Similarity=0.332 Sum_probs=26.7
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHHhc
Q 015666 296 LNAETVATTLALAEQHQCPQLKAICLKFAA 325 (403)
Q Consensus 296 l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 325 (403)
++.+|+..++..|..++.+.|++.|.+|+.
T Consensus 94 i~~~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 94 LSKENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp EETTTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred cCHHHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 567899999999999999999999998874
No 70
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=29.53 E-value=26 Score=30.93 Aligned_cols=30 Identities=13% Similarity=0.231 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhcccChhhHHHHHHHHHHcc
Q 015666 266 TNMVQHLLAAADLYNVDRLKLLCESKLCEE 295 (403)
Q Consensus 266 ~~~~~~ll~~Ad~~~~~~L~~~c~~~L~~~ 295 (403)
.+++..++.+|+.|+++.|...|..++..+
T Consensus 141 ~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~ 170 (279)
T 3i3n_A 141 LSNCVAIHSLAHMYTLSQLALKAADMIRRN 170 (279)
T ss_dssp TTTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 468999999999999999999999998764
No 71
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=28.87 E-value=76 Score=24.77 Aligned_cols=60 Identities=12% Similarity=0.106 Sum_probs=41.8
Q ss_pred ccHHHHHHHHHHhcccCh---------------hhHHHHHHHHHHccCChhhHHHHHHHHHhCCChHHHHHHHHHhc
Q 015666 264 TTTNMVQHLLAAADLYNV---------------DRLKLLCESKLCEELNAETVATTLALAEQHQCPQLKAICLKFAA 325 (403)
Q Consensus 264 ~~~~~~~~ll~~Ad~~~~---------------~~L~~~c~~~L~~~l~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 325 (403)
++...+..++..+.+..- ..+..--.+|+ .++.+++.+++..|...+...|.+.|.++++
T Consensus 44 V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~--~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA 118 (141)
T 1fs1_B 44 VNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFL--KVDQGTLFELILAANYLDIKGLLDVTCKTVA 118 (141)
T ss_dssp CCHHHHHHHHHHHHHHTTCC-----------------HHHHHHT--CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhccCCCccccccccccchhhhhHHHHHHH--hCCHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 455666777776654431 11222222334 3788999999999999999999999999998
Done!