Query 015669
Match_columns 403
No_of_seqs 300 out of 2454
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 08:28:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015669.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015669hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2272 PnbA Carboxylesterase 99.9 2.6E-24 5.6E-29 215.6 11.1 155 135-294 19-199 (491)
2 COG0657 Aes Esterase/lipase [L 99.9 1E-21 2.2E-26 192.4 17.9 135 184-328 59-195 (312)
3 PF00135 COesterase: Carboxyle 99.9 5.4E-23 1.2E-27 214.5 4.2 174 135-322 45-243 (535)
4 PRK10162 acetyl esterase; Prov 99.9 1.1E-20 2.5E-25 185.9 19.6 130 188-327 68-198 (318)
5 KOG1515 Arylacetamide deacetyl 99.9 1.3E-20 2.9E-25 185.0 19.4 202 177-389 62-283 (336)
6 PF07859 Abhydrolase_3: alpha/ 99.9 3.7E-21 8.1E-26 177.1 14.0 111 206-326 1-112 (211)
7 cd00312 Esterase_lipase Estera 99.8 2.8E-21 6.1E-26 200.8 10.2 156 135-295 16-196 (493)
8 KOG4389 Acetylcholinesterase/B 99.8 5.4E-21 1.2E-25 189.7 5.0 156 134-294 51-237 (601)
9 COG1506 DAP2 Dipeptidyl aminop 99.8 1.2E-18 2.5E-23 186.1 15.6 198 178-402 365-577 (620)
10 PRK13604 luxD acyl transferase 99.7 6.1E-17 1.3E-21 156.9 18.1 190 184-402 15-228 (307)
11 KOG1516 Carboxylesterase and r 99.7 4.3E-18 9.3E-23 179.2 9.3 134 155-294 69-214 (545)
12 TIGR01840 esterase_phb esteras 99.7 8.3E-17 1.8E-21 149.2 14.1 174 192-396 2-190 (212)
13 PRK10566 esterase; Provisional 99.7 1.4E-15 3E-20 143.4 16.4 98 193-296 16-128 (249)
14 PF00326 Peptidase_S9: Prolyl 99.7 3.1E-16 6.7E-21 145.0 11.2 150 224-402 5-170 (213)
15 PLN02298 hydrolase, alpha/beta 99.7 3.8E-15 8.3E-20 146.8 19.5 117 189-325 45-170 (330)
16 PRK10115 protease 2; Provision 99.7 2E-15 4.3E-20 162.7 17.1 197 177-402 415-632 (686)
17 KOG4627 Kynurenine formamidase 99.6 2.5E-15 5.3E-20 134.9 11.7 184 178-396 45-229 (270)
18 PHA02857 monoglyceride lipase; 99.6 2.7E-14 5.8E-19 136.7 18.2 115 187-325 11-133 (276)
19 PRK05077 frsA fermentation/res 99.6 2.7E-14 5.9E-19 145.5 18.4 196 179-396 169-377 (414)
20 KOG1552 Predicted alpha/beta h 99.6 8.6E-15 1.9E-19 136.5 12.8 166 190-402 48-218 (258)
21 KOG1455 Lysophospholipase [Lip 99.6 4E-14 8.7E-19 134.6 16.6 108 188-300 39-154 (313)
22 PF12695 Abhydrolase_5: Alpha/ 99.6 2.5E-14 5.4E-19 122.9 13.7 130 205-402 1-130 (145)
23 PLN02385 hydrolase; alpha/beta 99.6 7.1E-14 1.5E-18 139.1 18.7 101 189-296 74-183 (349)
24 TIGR02821 fghA_ester_D S-formy 99.5 3.8E-13 8.2E-18 129.8 16.2 177 189-395 27-233 (275)
25 PRK10749 lysophospholipase L2; 99.5 2.7E-13 5.8E-18 134.0 15.5 101 201-323 52-165 (330)
26 PLN02442 S-formylglutathione h 99.5 3.2E-13 6.9E-18 130.9 14.7 177 189-395 32-239 (283)
27 PLN02652 hydrolase; alpha/beta 99.5 8.3E-13 1.8E-17 133.8 18.3 125 180-325 113-246 (395)
28 COG1647 Esterase/lipase [Gener 99.5 3.7E-13 8.1E-18 122.6 13.2 172 204-402 16-207 (243)
29 PRK10985 putative hydrolase; P 99.5 2.8E-12 6.1E-17 126.5 19.6 110 200-328 55-172 (324)
30 PLN00021 chlorophyllase 99.5 1.7E-12 3.7E-17 127.5 15.9 123 188-323 38-165 (313)
31 TIGR02427 protocat_pcaD 3-oxoa 99.4 1.2E-12 2.6E-17 120.5 13.6 90 201-296 11-100 (251)
32 PRK00870 haloalkane dehalogena 99.4 4.2E-12 9.2E-17 123.5 16.6 111 181-296 24-136 (302)
33 PRK11460 putative hydrolase; P 99.4 2.4E-12 5.2E-17 121.3 14.4 140 200-396 13-170 (232)
34 TIGR02240 PHA_depoly_arom poly 99.4 4.1E-12 8.8E-17 121.9 15.2 91 202-298 24-114 (276)
35 PLN02511 hydrolase 99.4 8.4E-12 1.8E-16 126.3 17.8 121 187-326 82-212 (388)
36 PF10503 Esterase_phd: Esteras 99.4 2.6E-12 5.6E-17 119.7 12.8 119 190-323 2-131 (220)
37 KOG2100 Dipeptidyl aminopeptid 99.4 2.4E-12 5.1E-17 139.7 14.2 183 189-402 510-708 (755)
38 TIGR03056 bchO_mg_che_rel puta 99.4 1.5E-11 3.2E-16 116.6 16.7 97 191-296 16-116 (278)
39 KOG4391 Predicted alpha/beta h 99.4 3.9E-12 8.4E-17 115.4 11.8 186 179-401 55-246 (300)
40 TIGR03343 biphenyl_bphD 2-hydr 99.4 1.3E-11 2.8E-16 118.0 16.1 101 191-296 20-122 (282)
41 PF12697 Abhydrolase_6: Alpha/ 99.4 5.5E-12 1.2E-16 113.9 12.6 99 206-327 1-104 (228)
42 COG2267 PldB Lysophospholipase 99.4 7.2E-12 1.6E-16 122.4 14.0 119 189-327 22-145 (298)
43 TIGR03611 RutD pyrimidine util 99.4 1.2E-11 2.7E-16 114.9 15.0 90 201-296 11-101 (257)
44 COG4099 Predicted peptidase [G 99.3 3.2E-12 6.9E-17 120.8 9.4 157 188-402 173-341 (387)
45 PLN02824 hydrolase, alpha/beta 99.3 2.6E-11 5.6E-16 117.3 15.6 88 203-296 29-123 (294)
46 TIGR03101 hydr2_PEP hydrolase, 99.3 3.4E-11 7.4E-16 115.6 15.9 124 189-332 11-142 (266)
47 PRK10673 acyl-CoA esterase; Pr 99.3 4.3E-11 9.4E-16 112.5 15.4 91 199-296 12-102 (255)
48 PRK11071 esterase YqiA; Provis 99.3 2.1E-11 4.6E-16 111.4 12.6 155 204-401 2-161 (190)
49 PLN02965 Probable pheophorbida 99.3 5.3E-11 1.2E-15 112.9 15.5 88 205-296 5-93 (255)
50 PRK14875 acetoin dehydrogenase 99.3 3.2E-11 6.9E-16 120.1 13.4 90 201-296 129-218 (371)
51 PRK03592 haloalkane dehalogena 99.3 9E-11 1.9E-15 113.6 16.2 109 192-322 18-126 (295)
52 PF05448 AXE1: Acetyl xylan es 99.3 4.3E-11 9.4E-16 117.9 13.5 192 179-402 57-288 (320)
53 PF01738 DLH: Dienelactone hyd 99.3 8.3E-11 1.8E-15 109.2 14.7 146 191-395 3-166 (218)
54 TIGR03100 hydr1_PEP hydrolase, 99.3 7.4E-11 1.6E-15 113.7 14.8 125 180-325 4-135 (274)
55 TIGR03695 menH_SHCHC 2-succiny 99.3 6.9E-11 1.5E-15 108.3 13.4 88 203-296 1-91 (251)
56 TIGR01250 pro_imino_pep_2 prol 99.3 2.2E-10 4.9E-15 107.9 16.8 92 201-296 23-117 (288)
57 PRK06489 hypothetical protein; 99.2 4.1E-10 8.9E-15 112.7 18.3 101 191-299 50-178 (360)
58 TIGR01738 bioH putative pimelo 99.2 8.6E-11 1.9E-15 107.9 12.3 84 203-297 4-87 (245)
59 PLN02679 hydrolase, alpha/beta 99.2 1.4E-10 3.1E-15 116.1 14.7 88 202-295 87-175 (360)
60 PF12740 Chlorophyllase2: Chlo 99.2 6.5E-11 1.4E-15 112.1 11.4 121 190-323 5-130 (259)
61 PLN02211 methyl indole-3-aceta 99.2 3.1E-10 6.7E-15 109.4 16.0 93 200-296 15-108 (273)
62 PRK10349 carboxylesterase BioH 99.2 1.2E-10 2.5E-15 110.3 12.8 83 204-297 14-96 (256)
63 TIGR01836 PHA_synth_III_C poly 99.2 2.9E-10 6.3E-15 113.3 16.3 111 179-296 39-157 (350)
64 PRK11126 2-succinyl-6-hydroxy- 99.2 1.4E-10 3E-15 108.4 12.9 86 203-296 2-87 (242)
65 PLN02578 hydrolase 99.2 1.9E-10 4E-15 115.0 14.3 87 202-298 85-175 (354)
66 PF02230 Abhydrolase_2: Phosph 99.2 1.3E-10 2.9E-15 107.9 12.4 148 200-399 11-180 (216)
67 PRK05371 x-prolyl-dipeptidyl a 99.2 5.6E-10 1.2E-14 121.7 18.8 162 224-402 270-481 (767)
68 KOG2281 Dipeptidyl aminopeptid 99.2 8.1E-11 1.7E-15 120.8 11.4 182 187-395 624-823 (867)
69 COG0400 Predicted esterase [Ge 99.2 1.7E-10 3.8E-15 106.4 12.7 145 200-400 15-172 (207)
70 PLN03087 BODYGUARD 1 domain co 99.2 5.4E-10 1.2E-14 115.6 17.1 89 202-297 200-296 (481)
71 PF12715 Abhydrolase_7: Abhydr 99.2 4.3E-11 9.3E-16 118.2 8.4 127 178-322 88-258 (390)
72 COG0412 Dienelactone hydrolase 99.2 9.9E-10 2.1E-14 103.8 16.9 156 181-396 5-180 (236)
73 TIGR01607 PST-A Plasmodium sub 99.2 4.7E-10 1E-14 111.2 15.3 103 189-295 10-162 (332)
74 TIGR01249 pro_imino_pep_1 prol 99.2 7.2E-10 1.6E-14 108.3 15.8 87 203-298 27-118 (306)
75 PLN02894 hydrolase, alpha/beta 99.2 1E-09 2.3E-14 111.6 17.0 91 201-297 103-198 (402)
76 COG0429 Predicted hydrolase of 99.2 1.2E-09 2.6E-14 105.6 16.0 129 179-328 52-189 (345)
77 TIGR00976 /NonD putative hydro 99.1 7.2E-10 1.6E-14 117.2 15.7 121 188-327 8-135 (550)
78 PF02129 Peptidase_S15: X-Pro 99.1 2.8E-10 6E-15 109.6 11.4 123 188-328 4-140 (272)
79 PRK07581 hypothetical protein; 99.1 8.2E-10 1.8E-14 109.3 14.7 92 202-301 40-150 (339)
80 KOG1838 Alpha/beta hydrolase [ 99.1 1.7E-09 3.6E-14 107.9 16.2 194 179-391 95-339 (409)
81 COG2945 Predicted hydrolase of 99.1 1.5E-09 3.2E-14 97.2 13.1 140 200-396 25-171 (210)
82 PRK03204 haloalkane dehalogena 99.1 1.6E-09 3.4E-14 105.0 14.0 86 202-296 33-122 (286)
83 COG3458 Acetyl esterase (deace 99.1 5.8E-10 1.2E-14 104.6 10.0 191 179-402 57-285 (321)
84 PF06500 DUF1100: Alpha/beta h 99.1 1.5E-09 3.2E-14 109.0 13.5 194 180-399 169-377 (411)
85 PRK08775 homoserine O-acetyltr 99.1 1.8E-09 3.8E-14 107.4 13.9 66 228-297 94-160 (343)
86 PF10340 DUF2424: Protein of u 99.1 2.3E-09 5E-14 106.5 13.5 113 201-327 120-238 (374)
87 COG3509 LpqC Poly(3-hydroxybut 99.0 1.1E-09 2.4E-14 104.2 10.4 107 189-296 47-165 (312)
88 KOG4178 Soluble epoxide hydrol 99.0 5.7E-09 1.2E-13 101.0 15.2 103 191-301 32-139 (322)
89 PLN03084 alpha/beta hydrolase 99.0 6E-09 1.3E-13 105.3 15.8 100 191-296 115-218 (383)
90 PRK05855 short chain dehydroge 99.0 3.6E-09 7.8E-14 111.5 13.0 90 201-295 23-114 (582)
91 PF07224 Chlorophyllase: Chlor 99.0 3.3E-09 7.2E-14 99.2 10.7 107 187-297 31-142 (307)
92 KOG4667 Predicted esterase [Li 99.0 9.5E-09 2.1E-13 93.5 12.5 172 201-396 31-221 (269)
93 KOG2564 Predicted acetyltransf 99.0 6.9E-09 1.5E-13 97.8 11.7 102 186-296 57-167 (343)
94 TIGR01392 homoserO_Ac_trn homo 98.9 9.5E-09 2.1E-13 102.4 13.3 88 202-297 30-149 (351)
95 KOG4388 Hormone-sensitive lipa 98.9 1.6E-09 3.4E-14 110.2 7.3 106 190-296 384-490 (880)
96 TIGR01838 PHA_synth_I poly(R)- 98.9 1.2E-07 2.6E-12 99.3 19.9 104 180-291 166-278 (532)
97 cd00707 Pancreat_lipase_like P 98.9 1.6E-08 3.5E-13 97.7 12.0 105 200-323 33-146 (275)
98 PRK00175 metX homoserine O-ace 98.8 3.4E-08 7.5E-13 99.6 13.4 91 202-297 47-169 (379)
99 PLN02980 2-oxoglutarate decarb 98.8 9.6E-08 2.1E-12 112.3 18.1 89 202-296 1370-1466(1655)
100 COG1505 Serine proteases of th 98.8 1.8E-08 3.8E-13 103.7 8.6 194 178-402 394-606 (648)
101 KOG1454 Predicted hydrolase/ac 98.8 5E-08 1.1E-12 96.5 11.3 91 201-296 56-149 (326)
102 PRK07868 acyl-CoA synthetase; 98.7 3.4E-07 7.5E-12 103.3 16.9 107 179-295 40-161 (994)
103 PF05728 UPF0227: Uncharacteri 98.6 6.7E-07 1.5E-11 81.5 13.0 150 206-395 2-155 (187)
104 PF06342 DUF1057: Alpha/beta h 98.6 2.2E-06 4.8E-11 81.7 15.8 93 200-296 32-125 (297)
105 PF03403 PAF-AH_p_II: Platelet 98.5 3.2E-07 6.9E-12 92.6 9.7 106 201-324 98-262 (379)
106 TIGR03230 lipo_lipase lipoprot 98.5 7.1E-07 1.5E-11 91.2 11.6 90 201-295 39-139 (442)
107 KOG2112 Lysophospholipase [Lip 98.5 1E-06 2.3E-11 80.2 11.2 100 253-400 71-170 (206)
108 KOG2237 Predicted serine prote 98.5 3.9E-07 8.5E-12 94.4 9.0 201 178-402 441-658 (712)
109 PF03959 FSH1: Serine hydrolas 98.5 8.8E-07 1.9E-11 82.3 10.5 153 202-400 3-188 (212)
110 COG4188 Predicted dienelactone 98.5 5.2E-07 1.1E-11 88.9 9.3 104 188-294 51-178 (365)
111 KOG4409 Predicted hydrolase/ac 98.5 4.6E-07 9.9E-12 88.4 8.5 97 200-300 87-185 (365)
112 PLN02872 triacylglycerol lipas 98.5 1.1E-06 2.4E-11 89.1 11.6 104 184-293 50-178 (395)
113 COG1770 PtrB Protease II [Amin 98.4 2.2E-06 4.8E-11 89.5 12.7 180 190-394 433-629 (682)
114 TIGR03502 lipase_Pla1_cef extr 98.4 2.2E-06 4.7E-11 92.9 11.8 91 202-295 448-575 (792)
115 KOG3101 Esterase D [General fu 98.4 6.7E-07 1.5E-11 81.4 6.5 173 188-389 27-230 (283)
116 PF07819 PGAP1: PGAP1-like pro 98.4 4.6E-06 1E-10 78.3 12.1 108 203-324 4-123 (225)
117 PF03583 LIP: Secretory lipase 98.3 7.9E-06 1.7E-10 79.6 13.3 70 224-294 17-90 (290)
118 PF00756 Esterase: Putative es 98.3 1.6E-06 3.4E-11 81.9 8.1 120 189-327 8-153 (251)
119 PF00561 Abhydrolase_1: alpha/ 98.3 2E-06 4.2E-11 78.6 7.6 71 234-323 1-78 (230)
120 COG3571 Predicted hydrolase of 98.3 1.7E-05 3.7E-10 69.5 12.6 137 205-393 16-161 (213)
121 PF08538 DUF1749: Protein of u 98.3 4.6E-05 9.9E-10 74.0 16.7 120 202-331 32-155 (303)
122 KOG2382 Predicted alpha/beta h 98.2 1.6E-05 3.5E-10 77.3 13.1 86 199-293 48-140 (315)
123 PF00151 Lipase: Lipase; Inte 98.2 3.9E-06 8.4E-11 83.2 8.8 94 200-295 68-170 (331)
124 TIGR01839 PHA_synth_II poly(R) 98.2 7.2E-05 1.6E-09 78.3 18.1 106 180-293 193-306 (560)
125 PRK10439 enterobactin/ferric e 98.2 1.5E-05 3.3E-10 81.4 12.9 119 189-324 194-323 (411)
126 KOG3847 Phospholipase A2 (plat 98.2 5.4E-06 1.2E-10 79.6 8.0 109 197-323 112-274 (399)
127 PF12146 Hydrolase_4: Putative 98.2 4.9E-06 1.1E-10 65.0 6.5 55 189-248 4-58 (79)
128 PRK06765 homoserine O-acetyltr 98.1 1.9E-05 4E-10 80.2 11.7 91 201-299 54-185 (389)
129 COG2936 Predicted acyl esteras 98.1 7.6E-06 1.6E-10 85.2 8.7 129 180-327 23-162 (563)
130 PF06821 Ser_hydrolase: Serine 98.1 2.9E-05 6.4E-10 69.7 11.3 138 206-398 1-138 (171)
131 KOG2984 Predicted hydrolase [G 98.0 9.4E-06 2E-10 73.6 4.8 84 205-297 44-136 (277)
132 KOG3043 Predicted hydrolase re 97.9 5.6E-05 1.2E-09 69.7 9.6 142 191-396 28-186 (242)
133 PF09752 DUF2048: Uncharacteri 97.9 0.00015 3.3E-09 71.4 12.9 101 189-296 77-196 (348)
134 PF08840 BAAT_C: BAAT / Acyl-C 97.9 3.3E-05 7.2E-10 71.8 7.7 50 256-323 6-55 (213)
135 PF02273 Acyl_transf_2: Acyl t 97.9 0.00019 4.1E-09 67.2 12.1 185 186-395 10-216 (294)
136 PF05677 DUF818: Chlamydia CHL 97.9 0.00014 3.1E-09 71.2 11.6 107 187-295 120-235 (365)
137 COG3208 GrsT Predicted thioest 97.8 0.00027 5.9E-09 66.2 11.3 90 202-296 6-95 (244)
138 COG0596 MhpC Predicted hydrola 97.8 0.00024 5.1E-09 64.2 10.7 87 203-298 21-111 (282)
139 PF06028 DUF915: Alpha/beta hy 97.6 0.00069 1.5E-08 64.8 12.2 108 203-327 11-146 (255)
140 PF11144 DUF2920: Protein of u 97.6 0.00068 1.5E-08 68.1 11.4 45 253-298 163-207 (403)
141 PF05057 DUF676: Putative seri 97.5 0.00029 6.2E-09 65.7 8.1 92 201-295 2-98 (217)
142 PRK04940 hypothetical protein; 97.5 0.0023 5.1E-08 57.7 13.0 22 275-296 60-81 (180)
143 TIGR01849 PHB_depoly_PhaZ poly 97.5 0.0025 5.4E-08 64.8 14.2 135 176-327 74-211 (406)
144 KOG1553 Predicted alpha/beta h 97.4 0.00029 6.2E-09 68.7 6.5 105 201-330 241-351 (517)
145 PF00975 Thioesterase: Thioest 97.4 0.00055 1.2E-08 63.4 8.1 102 204-323 1-103 (229)
146 PF01674 Lipase_2: Lipase (cla 97.4 0.00062 1.3E-08 63.6 8.2 85 205-295 3-95 (219)
147 PF06057 VirJ: Bacterial virul 97.3 0.0016 3.5E-08 59.1 10.0 99 205-322 4-105 (192)
148 COG3545 Predicted esterase of 97.3 0.0052 1.1E-07 54.9 12.9 82 274-396 58-139 (181)
149 PF10230 DUF2305: Uncharacteri 97.3 0.0029 6.2E-08 60.9 11.4 91 203-296 2-105 (266)
150 PF05990 DUF900: Alpha/beta hy 97.2 0.0039 8.4E-08 58.8 11.5 119 201-328 16-141 (233)
151 KOG2624 Triglyceride lipase-ch 97.1 0.0018 4E-08 65.7 8.9 108 181-297 51-183 (403)
152 COG1073 Hydrolases of the alph 97.1 0.0015 3.3E-08 61.8 7.5 50 189-241 33-84 (299)
153 PF11339 DUF3141: Protein of u 97.0 0.019 4E-07 59.4 14.6 105 190-299 53-164 (581)
154 PF10142 PhoPQ_related: PhoPQ- 97.0 0.029 6.3E-07 56.3 15.9 189 189-402 50-288 (367)
155 PF12048 DUF3530: Protein of u 96.8 0.028 6.1E-07 55.3 14.1 125 186-325 70-230 (310)
156 COG3243 PhaC Poly(3-hydroxyalk 96.7 0.031 6.8E-07 56.4 13.7 103 190-299 94-205 (445)
157 COG4757 Predicted alpha/beta h 96.7 0.0033 7.2E-08 58.5 6.2 68 221-293 45-123 (281)
158 COG2382 Fes Enterochelin ester 96.7 0.0062 1.3E-07 58.9 8.1 122 189-327 82-215 (299)
159 COG2819 Predicted hydrolase of 96.7 0.021 4.6E-07 54.4 11.5 43 270-326 132-174 (264)
160 PF05577 Peptidase_S28: Serine 96.6 0.015 3.2E-07 59.8 10.8 103 191-296 16-134 (434)
161 KOG2551 Phospholipase/carboxyh 96.6 0.0059 1.3E-07 56.5 6.7 95 257-395 89-184 (230)
162 COG0627 Predicted esterase [Ge 96.6 0.0053 1.1E-07 60.5 6.7 120 191-327 37-190 (316)
163 COG4814 Uncharacterized protei 96.6 0.015 3.2E-07 54.9 9.3 104 205-325 47-177 (288)
164 COG2021 MET2 Homoserine acetyl 96.5 0.062 1.3E-06 53.5 14.0 92 201-300 49-172 (368)
165 PLN02733 phosphatidylcholine-s 96.5 0.018 3.9E-07 59.4 10.6 90 220-325 108-202 (440)
166 COG4782 Uncharacterized protei 96.5 0.019 4E-07 56.9 10.2 114 201-327 114-237 (377)
167 COG3319 Thioesterase domains o 96.5 0.0069 1.5E-07 57.9 6.8 83 204-295 1-85 (257)
168 KOG3724 Negative regulator of 96.1 0.025 5.4E-07 60.9 8.8 90 204-296 90-203 (973)
169 PTZ00472 serine carboxypeptida 95.8 0.019 4.1E-07 59.7 6.6 100 193-295 67-191 (462)
170 PF07082 DUF1350: Protein of u 95.6 0.062 1.3E-06 50.8 8.6 87 205-294 18-109 (250)
171 KOG4840 Predicted hydrolases o 95.4 0.52 1.1E-05 43.9 13.6 86 204-294 37-126 (299)
172 COG3150 Predicted esterase [Ge 95.2 0.17 3.7E-06 45.1 9.4 78 206-297 2-81 (191)
173 PRK10252 entF enterobactin syn 95.2 0.049 1.1E-06 63.3 8.1 87 203-296 1068-1154(1296)
174 KOG3253 Predicted alpha/beta h 95.1 0.083 1.8E-06 55.4 8.4 149 202-396 175-326 (784)
175 PF02450 LCAT: Lecithin:choles 95.1 0.086 1.9E-06 53.6 8.4 89 221-324 66-160 (389)
176 COG1075 LipA Predicted acetylt 94.7 0.054 1.2E-06 53.9 5.8 85 204-295 60-147 (336)
177 KOG3967 Uncharacterized conser 94.2 0.35 7.6E-06 44.7 9.1 92 200-296 98-211 (297)
178 PF00450 Peptidase_S10: Serine 94.0 0.74 1.6E-05 46.5 12.3 125 198-327 35-184 (415)
179 PF01764 Lipase_3: Lipase (cla 93.8 0.12 2.6E-06 43.9 5.2 36 259-296 50-85 (140)
180 KOG2541 Palmitoyl protein thio 93.5 0.65 1.4E-05 44.4 9.9 102 203-322 24-126 (296)
181 PF11187 DUF2974: Protein of u 93.3 0.2 4.4E-06 47.0 6.3 40 254-296 66-105 (224)
182 PF05705 DUF829: Eukaryotic pr 93.3 1.5 3.2E-05 41.1 12.3 109 206-323 2-111 (240)
183 KOG2931 Differentiation-relate 93.2 2.3 4.9E-05 41.4 13.1 121 191-332 34-165 (326)
184 KOG3975 Uncharacterized conser 92.9 1.1 2.3E-05 42.6 10.2 97 191-295 18-130 (301)
185 KOG2183 Prolylcarboxypeptidase 92.7 1.1 2.4E-05 45.3 10.7 92 204-301 81-193 (492)
186 PF03283 PAE: Pectinacetyleste 91.9 0.67 1.5E-05 46.6 8.3 40 252-294 136-175 (361)
187 COG4947 Uncharacterized protei 91.8 0.65 1.4E-05 41.6 7.0 111 200-331 24-143 (227)
188 COG3946 VirJ Type IV secretory 91.8 0.85 1.8E-05 46.1 8.6 78 204-290 261-341 (456)
189 cd00741 Lipase Lipase. Lipase 91.7 0.31 6.8E-06 42.3 5.0 24 273-296 26-49 (153)
190 PF11288 DUF3089: Protein of u 91.5 0.57 1.2E-05 43.3 6.7 60 233-296 45-116 (207)
191 PF03096 Ndr: Ndr family; Int 91.3 2 4.3E-05 41.7 10.4 121 190-332 10-142 (283)
192 PLN02408 phospholipase A1 91.0 0.37 8E-06 48.4 5.3 38 259-296 184-221 (365)
193 PLN02761 lipase class 3 family 90.8 1.3 2.8E-05 46.3 9.1 38 259-296 274-315 (527)
194 PLN02454 triacylglycerol lipas 90.5 0.47 1E-05 48.4 5.5 38 259-296 212-249 (414)
195 PLN02606 palmitoyl-protein thi 90.4 1.9 4.1E-05 42.2 9.4 22 275-296 95-116 (306)
196 PF02089 Palm_thioest: Palmito 88.9 1.5 3.3E-05 42.4 7.4 102 201-322 4-114 (279)
197 PLN02633 palmitoyl protein thi 88.9 3.7 8.1E-05 40.3 10.2 89 202-296 25-115 (314)
198 PLN02571 triacylglycerol lipas 88.9 0.64 1.4E-05 47.4 5.1 38 259-296 210-247 (413)
199 PLN02517 phosphatidylcholine-s 88.7 1.1 2.5E-05 47.5 6.9 67 223-294 159-232 (642)
200 smart00824 PKS_TE Thioesterase 88.4 1.7 3.8E-05 38.4 7.2 72 219-295 12-84 (212)
201 PLN02802 triacylglycerol lipas 88.3 0.71 1.5E-05 48.1 5.0 38 259-296 314-351 (509)
202 PF01083 Cutinase: Cutinase; 88.2 4.2 9.2E-05 36.6 9.5 85 206-295 8-101 (179)
203 PLN02324 triacylglycerol lipas 88.0 0.84 1.8E-05 46.5 5.2 36 261-296 201-236 (415)
204 cd00519 Lipase_3 Lipase (class 87.7 0.87 1.9E-05 42.3 4.9 23 274-296 127-149 (229)
205 PLN02753 triacylglycerol lipas 86.6 1 2.2E-05 47.1 5.0 38 259-296 293-333 (531)
206 PLN02310 triacylglycerol lipas 86.0 1.1 2.5E-05 45.5 5.0 37 259-295 191-229 (405)
207 PLN03016 sinapoylglucose-malat 85.8 2.5 5.4E-05 43.7 7.4 21 375-395 348-368 (433)
208 TIGR03712 acc_sec_asp2 accesso 85.7 4.1 8.8E-05 42.3 8.7 86 201-294 287-376 (511)
209 PLN03037 lipase class 3 family 84.8 1.4 3E-05 46.1 5.0 37 260-296 301-339 (525)
210 PLN02719 triacylglycerol lipas 84.7 1.4 3.1E-05 46.0 5.0 38 259-296 279-319 (518)
211 PLN02209 serine carboxypeptida 83.2 4 8.7E-05 42.2 7.6 41 254-294 145-186 (437)
212 COG2939 Carboxypeptidase C (ca 82.5 2.7 5.8E-05 43.7 5.9 44 251-294 174-217 (498)
213 KOG2369 Lecithin:cholesterol a 81.5 4.2 9.1E-05 42.0 6.8 70 222-294 126-201 (473)
214 PLN02847 triacylglycerol lipas 79.8 2.5 5.4E-05 45.0 4.7 21 275-295 251-271 (633)
215 KOG1282 Serine carboxypeptidas 79.7 8.5 0.00018 39.9 8.5 21 375-395 364-384 (454)
216 PLN00413 triacylglycerol lipas 76.9 4.1 8.8E-05 42.3 5.1 21 275-295 284-304 (479)
217 PF08386 Abhydrolase_4: TAP-li 76.7 3.6 7.8E-05 33.4 3.9 23 374-396 34-56 (103)
218 TIGR00632 vsr DNA mismatch end 75.1 4.3 9.4E-05 34.1 4.0 44 191-239 49-113 (117)
219 PF08237 PE-PPE: PE-PPE domain 74.8 13 0.00027 35.0 7.5 64 233-296 2-69 (225)
220 PLN02162 triacylglycerol lipas 74.7 5 0.00011 41.6 5.1 21 275-295 278-298 (475)
221 PLN02934 triacylglycerol lipas 74.2 6.1 0.00013 41.3 5.6 21 275-295 321-341 (515)
222 PF07519 Tannase: Tannase and 73.1 23 0.0005 37.1 9.7 108 188-300 16-140 (474)
223 PF06259 Abhydrolase_8: Alpha/ 72.9 60 0.0013 29.3 11.1 24 272-295 106-129 (177)
224 KOG2182 Hydrolytic enzymes of 72.6 38 0.00082 35.4 10.7 93 201-297 84-194 (514)
225 KOG4569 Predicted lipase [Lipi 72.3 5 0.00011 39.9 4.4 23 275-297 171-193 (336)
226 PF03991 Prion_octapep: Copper 70.8 1.9 4.1E-05 18.7 0.4 6 210-215 2-7 (8)
227 COG3673 Uncharacterized conser 69.6 57 0.0012 32.4 10.6 37 253-293 104-140 (423)
228 KOG2565 Predicted hydrolases o 68.9 18 0.0004 36.5 7.3 108 191-303 139-257 (469)
229 KOG4372 Predicted alpha/beta h 68.4 4.6 0.0001 40.9 3.1 88 200-292 77-167 (405)
230 COG4287 PqaA PhoPQ-activated p 67.0 44 0.00096 33.8 9.5 105 190-296 111-255 (507)
231 PF05277 DUF726: Protein of un 63.3 29 0.00064 34.7 7.7 44 273-325 218-261 (345)
232 PF04083 Abhydro_lipase: Parti 60.2 21 0.00046 26.4 4.6 36 182-220 16-57 (63)
233 PF10081 Abhydrolase_9: Alpha/ 58.6 1.1E+02 0.0024 29.8 10.4 81 210-293 41-127 (289)
234 KOG1551 Uncharacterized conser 52.0 26 0.00056 33.8 4.8 99 189-294 102-214 (371)
235 PF09994 DUF2235: Uncharacteri 51.1 26 0.00057 33.8 5.0 37 253-293 74-110 (277)
236 COG5153 CVT17 Putative lipase 44.4 32 0.00069 33.6 4.2 22 275-296 276-297 (425)
237 KOG4540 Putative lipase essent 44.4 32 0.00069 33.6 4.2 22 275-296 276-297 (425)
238 COG3727 Vsr DNA G:T-mismatch r 42.8 31 0.00067 29.6 3.4 38 202-239 56-114 (150)
239 KOG2029 Uncharacterized conser 42.0 84 0.0018 33.8 7.1 64 233-296 478-547 (697)
240 KOG2872 Uroporphyrinogen decar 35.5 1.1E+02 0.0025 29.8 6.4 38 196-243 245-282 (359)
241 PLN02872 triacylglycerol lipas 33.4 44 0.00095 34.1 3.6 25 375-401 326-350 (395)
242 COG3340 PepE Peptidase E [Amin 33.4 73 0.0016 29.7 4.6 15 276-290 118-132 (224)
243 PF07519 Tannase: Tannase and 32.5 29 0.00062 36.3 2.1 27 374-402 353-379 (474)
244 PRK05282 (alpha)-aspartyl dipe 28.3 1.8E+02 0.0039 27.4 6.5 17 276-292 113-129 (233)
245 cd07224 Pat_like Patatin-like 27.8 72 0.0016 29.8 3.8 33 259-295 17-49 (233)
246 KOG1252 Cystathionine beta-syn 26.6 1.2E+02 0.0026 30.3 5.1 88 202-293 210-321 (362)
247 PF04301 DUF452: Protein of un 26.0 58 0.0013 30.3 2.7 19 275-293 57-75 (213)
248 PF00326 Peptidase_S9: Prolyl 25.9 2.3E+02 0.0049 25.4 6.7 67 202-268 143-211 (213)
249 KOG1532 GTPase XAB1, interacts 25.8 3.9E+02 0.0085 26.3 8.2 92 200-294 15-144 (366)
250 cd02011 TPP_PK Thiamine pyroph 24.7 3.1E+02 0.0068 25.8 7.4 59 205-268 115-178 (227)
251 COG0529 CysC Adenylylsulfate k 24.5 1.3E+02 0.0028 27.5 4.5 37 201-240 20-58 (197)
252 COG0431 Predicted flavoprotein 24.1 1.8E+02 0.0039 26.0 5.6 60 223-293 59-119 (184)
253 PF12242 Eno-Rase_NADH_b: NAD( 24.0 1.8E+02 0.004 22.5 4.6 41 253-295 20-60 (78)
254 KOG4127 Renal dipeptidase [Pos 22.7 2.5E+02 0.0053 28.4 6.4 78 203-285 266-345 (419)
255 KOG1200 Mitochondrial/plastidi 21.2 2.6E+02 0.0057 26.0 5.8 34 205-243 15-48 (256)
256 cd00221 Vsr Very Short Patch R 20.9 1.4E+02 0.003 24.9 3.8 45 190-239 45-110 (115)
257 PLN02213 sinapoylglucose-malat 20.3 1.7E+02 0.0038 28.6 5.0 21 375-395 234-254 (319)
258 TIGR02690 resist_ArsH arsenica 20.1 2.2E+02 0.0047 26.6 5.3 55 224-285 83-139 (219)
259 KOG2385 Uncharacterized conser 20.0 3.8E+02 0.0083 28.5 7.4 23 274-296 446-468 (633)
No 1
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=99.91 E-value=2.6e-24 Score=215.59 Aligned_cols=155 Identities=25% Similarity=0.359 Sum_probs=124.9
Q ss_pred hhhhhcCcChhh----HHHHHHH--------hhhhhhcCCcccccccccccccceeeceeecCCCceEEEEEeeCCCCCC
Q 015669 135 KLLRYLGVGYRW----IVRFLAL--------GCYSLLLLPGFIQVGCHYFFSSQVRRGIVYGDQPRNRLDLYFPKSSDGP 202 (403)
Q Consensus 135 ~~~~~lgi~~~~----~~~~~~~--------~~~a~~~~p~~~q~~~~~~~~~~~~~~i~y~~~~~~~l~vy~P~~~~~~ 202 (403)
.+-+++||||+- ..||... ...+..+.|.|+|.... .. ..+..-+++||++||||.|+...++
T Consensus 19 ~v~~w~GIpYA~pPvG~~Rfr~p~~~~~w~~~rda~~~gp~~~Q~~~~----~~-~~~~~~~sEDCL~LNIwaP~~~a~~ 93 (491)
T COG2272 19 GVHSWLGIPYAAPPVGELRFRRPVPPEPWSGVRDATQFGPACPQPFNR----MG-SGEDFTGSEDCLYLNIWAPEVPAEK 93 (491)
T ss_pred ceeEEeecccCCCCCCcccccCCCCCcCCCcccchhccCCCCCCcccc----cc-ccccCCccccceeEEeeccCCCCCC
Confidence 367788888884 2233322 23457788888887541 11 1123346889999999999966778
Q ss_pred CcEEEEEcCCcccCCccccchHHHHHHHhCC-CeEEEecccCCCCCCch-------------hhHHHHHHHHHHHHHhhh
Q 015669 203 KPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYRNFPQGTIK-------------DMVKDASQGISFVCNNIS 268 (403)
Q Consensus 203 ~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G-~~Vv~~dyR~~~~~~~~-------------~~~~D~~~al~~l~~~~~ 268 (403)
+|||||||||+|..|+.....+.+..|+++| ++||++|||++..|++. ..+.|+..||+||++||+
T Consensus 94 ~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~NIe 173 (491)
T COG2272 94 LPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDNIE 173 (491)
T ss_pred CcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHHHHH
Confidence 9999999999999999998888889999996 99999999998887652 258999999999999999
Q ss_pred hcCCCCCcEEEEEcCchHHHHHHHHH
Q 015669 269 EYGGDPDRIYLMGQSAGAHIAACTLL 294 (403)
Q Consensus 269 ~~g~d~~rI~l~G~S~GG~la~~~a~ 294 (403)
.||+||++|+|+|+|+||+.++.++.
T Consensus 174 ~FGGDp~NVTl~GeSAGa~si~~Lla 199 (491)
T COG2272 174 AFGGDPQNVTLFGESAGAASILTLLA 199 (491)
T ss_pred HhCCCccceEEeeccchHHHHHHhhc
Confidence 99999999999999999999987764
No 2
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.88 E-value=1e-21 Score=192.45 Aligned_cols=135 Identities=27% Similarity=0.426 Sum_probs=111.6
Q ss_pred cCCCceEEEEEee-CCCCCCCcEEEEEcCCcccCCccccchHHHHHHHh-CCCeEEEecccCCCCCCchhhHHHHHHHHH
Q 015669 184 GDQPRNRLDLYFP-KSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSE-RDIIVACIDYRNFPQGTIKDMVKDASQGIS 261 (403)
Q Consensus 184 ~~~~~~~l~vy~P-~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~-~G~~Vv~~dyR~~~~~~~~~~~~D~~~al~ 261 (403)
...+...+++|.| .....+.|+|||+|||||..|+...+......++. .|+.|+++|||+.|++.++..+.|+.++++
T Consensus 59 ~~~~~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p~~~~d~~~a~~ 138 (312)
T COG0657 59 PSGDGVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPFPAALEDAYAAYR 138 (312)
T ss_pred CCCCceeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCCCchHHHHHHHHH
Confidence 3444477999999 33455689999999999999999988555555554 599999999999999999999999999999
Q ss_pred HHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhh
Q 015669 262 FVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFD 328 (403)
Q Consensus 262 ~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~ 328 (403)
|+.++..++++|+++|.|+|+|+||++++.++...... + ....+..+.+++..|...
T Consensus 139 ~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~--~--------~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 139 WLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDR--G--------LPLPAAQVLISPLLDLTS 195 (312)
T ss_pred HHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhc--C--------CCCceEEEEEecccCCcc
Confidence 99999999999999999999999999999888765332 1 134566777777777664
No 3
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=99.87 E-value=5.4e-23 Score=214.54 Aligned_cols=174 Identities=26% Similarity=0.341 Sum_probs=113.7
Q ss_pred hhhhhcCcChhhH----HHHHHH--------hhhhhhcCCcccccccccccccceeeceeecCCCceEEEEEeeCCCCC-
Q 015669 135 KLLRYLGVGYRWI----VRFLAL--------GCYSLLLLPGFIQVGCHYFFSSQVRRGIVYGDQPRNRLDLYFPKSSDG- 201 (403)
Q Consensus 135 ~~~~~lgi~~~~~----~~~~~~--------~~~a~~~~p~~~q~~~~~~~~~~~~~~i~y~~~~~~~l~vy~P~~~~~- 201 (403)
.+..|+||||+-. .||... ...++...|.|+|....... .........++||+.||||.|.....
T Consensus 45 ~v~~f~gIpYA~pP~g~~Rf~~p~~~~~~~~~~~a~~~~~~C~Q~~~~~~~--~~~~~~~~~sEDCL~LnI~~P~~~~~~ 122 (535)
T PF00135_consen 45 GVYSFLGIPYAQPPVGELRFRPPQPPPPWSGVRDATKYGPACPQPPPPGPS--PGFNPPVGQSEDCLYLNIYTPSNASSN 122 (535)
T ss_dssp EEEEEEEEESSE---GGGTTS--EB--S-SSEEETBS---BESCECTTSSH--HHCSHSSHBES---EEEEEEETSSSST
T ss_pred ceEEEeCcccCCCCCCCcccccccccccchhhhhhhhcccccccccccccc--cccccccCCCchHHHHhhhhccccccc
Confidence 4778888888842 233322 23456677888887653210 00011111477889999999987443
Q ss_pred -CCcEEEEEcCCcccCCccccchHHH-HHHHhCCCeEEEecccCCCCCCc----------hhhHHHHHHHHHHHHHhhhh
Q 015669 202 -PKPVVAFITGGAWIIGYKAWGSLLG-QQLSERDIIVACIDYRNFPQGTI----------KDMVKDASQGISFVCNNISE 269 (403)
Q Consensus 202 -~~PvVV~iHGGg~~~g~~~~~~~~~-~~La~~G~~Vv~~dyR~~~~~~~----------~~~~~D~~~al~~l~~~~~~ 269 (403)
++||+||||||||..|+.......+ ..+++++++||++|||++..|++ .-++.|+..||+||++||+.
T Consensus 123 ~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~ 202 (535)
T PF00135_consen 123 SKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAA 202 (535)
T ss_dssp TSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGG
T ss_pred cccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhh
Confidence 5899999999999999884333333 34456699999999999655443 24689999999999999999
Q ss_pred cCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeecc
Q 015669 270 YGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSG 322 (403)
Q Consensus 270 ~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg 322 (403)
||+||++|+|+|+|+||..+..+++.. . ....++.+|..||
T Consensus 203 FGGDp~~VTl~G~SAGa~sv~~~l~sp---~---------~~~LF~raI~~SG 243 (535)
T PF00135_consen 203 FGGDPDNVTLFGQSAGAASVSLLLLSP---S---------SKGLFHRAILQSG 243 (535)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHHGG---G---------GTTSBSEEEEES-
T ss_pred cccCCcceeeeeecccccccceeeecc---c---------ccccccccccccc
Confidence 999999999999999999999888752 1 1246888888887
No 4
>PRK10162 acetyl esterase; Provisional
Probab=99.86 E-value=1.1e-20 Score=185.93 Aligned_cols=130 Identities=22% Similarity=0.341 Sum_probs=110.4
Q ss_pred ceEEEEEeeCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhC-CCeEEEecccCCCCCCchhhHHHHHHHHHHHHHh
Q 015669 188 RNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSER-DIIVACIDYRNFPQGTIKDMVKDASQGISFVCNN 266 (403)
Q Consensus 188 ~~~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~-G~~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~ 266 (403)
.+.+++|.|.. .+.|+|||+|||||..|+...+..+++.|++. |+.|+++|||+.|+..++..+.|+.++++|+.++
T Consensus 68 ~i~~~~y~P~~--~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~~~~D~~~a~~~l~~~ 145 (318)
T PRK10162 68 QVETRLYYPQP--DSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQAIEEIVAVCCYFHQH 145 (318)
T ss_pred ceEEEEECCCC--CCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHh
Confidence 37899999964 34699999999999999988777888889885 9999999999999999999999999999999999
Q ss_pred hhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChh
Q 015669 267 ISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLF 327 (403)
Q Consensus 267 ~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~ 327 (403)
.+++++|+++|+|+|+|+||++|+.+++...... . ....+++.+.++|.+++.
T Consensus 146 ~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~--~------~~~~~~~~vl~~p~~~~~ 198 (318)
T PRK10162 146 AEDYGINMSRIGFAGDSAGAMLALASALWLRDKQ--I------DCGKVAGVLLWYGLYGLR 198 (318)
T ss_pred HHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcC--C------CccChhheEEECCccCCC
Confidence 9999999999999999999999998886532211 0 124577888888877754
No 5
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.86 E-value=1.3e-20 Score=184.95 Aligned_cols=202 Identities=20% Similarity=0.261 Sum_probs=146.6
Q ss_pred eeeceeecCCCceEEEEEeeCCCC--CCCcEEEEEcCCcccCCcc--ccchHHHHHHHhC-CCeEEEecccCCCCCCchh
Q 015669 177 VRRGIVYGDQPRNRLDLYFPKSSD--GPKPVVAFITGGAWIIGYK--AWGSLLGQQLSER-DIIVACIDYRNFPQGTIKD 251 (403)
Q Consensus 177 ~~~~i~y~~~~~~~l~vy~P~~~~--~~~PvVV~iHGGg~~~g~~--~~~~~~~~~La~~-G~~Vv~~dyR~~~~~~~~~ 251 (403)
..+++.+.....+.+++|.|.... .+.|+|||||||||..|+. ..+..+..+++++ +.+||++|||++|+..+|.
T Consensus 62 ~~~dv~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa 141 (336)
T KOG1515|consen 62 TSKDVTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPA 141 (336)
T ss_pred eeeeeEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCc
Confidence 357888888888999999998743 5789999999999999974 4566778888776 9999999999999999999
Q ss_pred hHHHHHHHHHHHHHh-hhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhh
Q 015669 252 MVKDASQGISFVCNN-ISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLV 330 (403)
Q Consensus 252 ~~~D~~~al~~l~~~-~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~ 330 (403)
.++|+.+|+.|+.++ ...++.|++||+|+|+|+||.+|..++....... ....++++.+.+.+++...+..
T Consensus 142 ~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~--------~~~~ki~g~ili~P~~~~~~~~ 213 (336)
T KOG1515|consen 142 AYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEK--------LSKPKIKGQILIYPFFQGTDRT 213 (336)
T ss_pred cchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhcc--------CCCcceEEEEEEecccCCCCCC
Confidence 999999999999998 7888999999999999999999998887643221 1246899999999887766544
Q ss_pred hhhhh----------hhhhHHHHhhhhcCchh----hhcCCccccccCCCcccccCCCCcEEEEEeCCCCCCC
Q 015669 331 DHFHS----------RGLYRSIFLSIMDGEES----LRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIP 389 (403)
Q Consensus 331 ~~~~~----------~~~~~~~~~~~~~~~~~----~~~~sp~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP 389 (403)
+...+ ....+.++. ....+.. -..++|... ...........||+||+.++.|.+..
T Consensus 214 ~~e~~~~~~~~~~~~~~~~~~~w~-~~lP~~~~~~~~p~~np~~~--~~~~d~~~~~lp~tlv~~ag~D~L~D 283 (336)
T KOG1515|consen 214 ESEKQQNLNGSPELARPKIDKWWR-LLLPNGKTDLDHPFINPVGN--SLAKDLSGLGLPPTLVVVAGYDVLRD 283 (336)
T ss_pred CHHHHHhhcCCcchhHHHHHHHHH-HhCCCCCCCcCCcccccccc--ccccCccccCCCceEEEEeCchhhhh
Confidence 32111 111111111 1111111 111222221 00112334567799999999999884
No 6
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.86 E-value=3.7e-21 Score=177.12 Aligned_cols=111 Identities=29% Similarity=0.512 Sum_probs=95.0
Q ss_pred EEEEcCCcccCCccccchHHHHHHHh-CCCeEEEecccCCCCCCchhhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCc
Q 015669 206 VAFITGGAWIIGYKAWGSLLGQQLSE-RDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSA 284 (403)
Q Consensus 206 VV~iHGGg~~~g~~~~~~~~~~~La~-~G~~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~ 284 (403)
|||||||||..|+......++..+++ .|++|+++|||++|+..+++.++|+.++++|+.++..++++|+++|+|+|+|+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SA 80 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAPFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSA 80 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETH
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccccccccccccccceeeeccccccccccccceEEeeccc
Confidence 79999999999999988888888887 69999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCCh
Q 015669 285 GAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNL 326 (403)
Q Consensus 285 GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~ 326 (403)
||++++.++....... ...+++++.++|++|+
T Consensus 81 Gg~la~~~~~~~~~~~----------~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 81 GGHLALSLALRARDRG----------LPKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHHHTT----------TCHESEEEEESCHSST
T ss_pred ccchhhhhhhhhhhhc----------ccchhhhhcccccccc
Confidence 9999999986543221 1358999999998877
No 7
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=99.84 E-value=2.8e-21 Score=200.77 Aligned_cols=156 Identities=28% Similarity=0.405 Sum_probs=117.7
Q ss_pred hhhhhcCcChhhHH----HHHHH--------hhhhhhcCCcccccccccccccceeeceeecCCCceEEEEEeeCCC--C
Q 015669 135 KLLRYLGVGYRWIV----RFLAL--------GCYSLLLLPGFIQVGCHYFFSSQVRRGIVYGDQPRNRLDLYFPKSS--D 200 (403)
Q Consensus 135 ~~~~~lgi~~~~~~----~~~~~--------~~~a~~~~p~~~q~~~~~~~~~~~~~~i~y~~~~~~~l~vy~P~~~--~ 200 (403)
.+..|+||||+-.. ||... ...++.+.|.|+|........ .......++||+.++||.|... .
T Consensus 16 ~~~~F~GIPYA~pP~g~~Rf~~p~~~~~w~~~~~a~~~g~~c~Q~~~~~~~~---~~~~~~~sEdcl~l~i~~p~~~~~~ 92 (493)
T cd00312 16 GVYSFLGIPYAEPPVGDLRFKEPQPYEPWSDVLDATSYPPSCMQWDQLGGGL---WNAKLPGSEDCLYLNVYTPKNTKPG 92 (493)
T ss_pred CEEEEeccccCCCCCccccCCCCCCCCCCcCceeccccCCCCccCCcccccc---ccCCCCCCCcCCeEEEEeCCCCCCC
Confidence 36678888887422 33221 234567788998865432110 0112235789999999999763 5
Q ss_pred CCCcEEEEEcCCcccCCccccchHHHHHHHhC-C-CeEEEecccCCCCCCch---------hhHHHHHHHHHHHHHhhhh
Q 015669 201 GPKPVVAFITGGAWIIGYKAWGSLLGQQLSER-D-IIVACIDYRNFPQGTIK---------DMVKDASQGISFVCNNISE 269 (403)
Q Consensus 201 ~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~-G-~~Vv~~dyR~~~~~~~~---------~~~~D~~~al~~l~~~~~~ 269 (403)
+++|||||||||||..|+.... ....|++. + ++||++|||+++.+++. ..+.|+..|++||+++++.
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~ 170 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAA 170 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 6789999999999999987654 34556655 4 99999999998776553 3589999999999999999
Q ss_pred cCCCCCcEEEEEcCchHHHHHHHHHH
Q 015669 270 YGGDPDRIYLMGQSAGAHIAACTLLE 295 (403)
Q Consensus 270 ~g~d~~rI~l~G~S~GG~la~~~a~~ 295 (403)
||+||++|+|+|+|+||+++..+++.
T Consensus 171 fggd~~~v~~~G~SaG~~~~~~~~~~ 196 (493)
T cd00312 171 FGGDPDSVTIFGESAGGASVSLLLLS 196 (493)
T ss_pred hCCCcceEEEEeecHHHHHhhhHhhC
Confidence 99999999999999999999888764
No 8
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=99.82 E-value=5.4e-21 Score=189.65 Aligned_cols=156 Identities=24% Similarity=0.345 Sum_probs=126.6
Q ss_pred hhhhhhcCcChh-----------------hHHHHHHHhhhhhhcCCcccccccccccccc---eeeceeecCCCceEEEE
Q 015669 134 FKLLRYLGVGYR-----------------WIVRFLALGCYSLLLLPGFIQVGCHYFFSSQ---VRRGIVYGDQPRNRLDL 193 (403)
Q Consensus 134 ~~~~~~lgi~~~-----------------~~~~~~~~~~~a~~~~p~~~q~~~~~~~~~~---~~~~i~y~~~~~~~l~v 193 (403)
.++-.|+||||+ |.+.+ .++.+.++|+|....|+..+. .+..-.--++||+++||
T Consensus 51 ~~V~aFlGIPfAePPvg~~RFkkP~p~~pW~g~l-----dAtt~a~~C~Q~~D~yfp~F~GsEMWNpNt~lSEDCLYlNV 125 (601)
T KOG4389|consen 51 KPVSAFLGIPFAEPPVGDLRFKKPEPKQPWSGVL-----DATTLANTCYQTRDTYFPGFWGSEMWNPNTELSEDCLYLNV 125 (601)
T ss_pred ceEEEEecCccCCCCCccccCCCCCcCCCcccee-----cccccchhhhccccccCCCCCcccccCCCCCcChhceEEEE
Confidence 357889999998 44433 447888899998877765432 22222334677888999
Q ss_pred EeeCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhC-CCeEEEecccCCCCCCch----------hhHHHHHHHHHH
Q 015669 194 YFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSER-DIIVACIDYRNFPQGTIK----------DMVKDASQGISF 262 (403)
Q Consensus 194 y~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~-G~~Vv~~dyR~~~~~~~~----------~~~~D~~~al~~ 262 (403)
|.|.....+.-|+|||.||||..|+.+-..+.++.|+.. +.+||.+|||++++|++- -.+.|++-|++|
T Consensus 126 W~P~~~p~n~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~DQqLAl~W 205 (601)
T KOG4389|consen 126 WAPAADPYNLTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLLDQQLALQW 205 (601)
T ss_pred eccCCCCCCceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccchHHHHHHHHH
Confidence 999644555669999999999999999889999999887 899999999998888652 258999999999
Q ss_pred HHHhhhhcCCCCCcEEEEEcCchHHHHHHHHH
Q 015669 263 VCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294 (403)
Q Consensus 263 l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~ 294 (403)
|++|+..||+||++|+|+|+|+|+..+..+++
T Consensus 206 V~~Ni~aFGGnp~~vTLFGESAGaASv~aHLl 237 (601)
T KOG4389|consen 206 VQENIAAFGGNPSRVTLFGESAGAASVVAHLL 237 (601)
T ss_pred HHHhHHHhCCCcceEEEeccccchhhhhheec
Confidence 99999999999999999999999999887664
No 9
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.79 E-value=1.2e-18 Score=186.06 Aligned_cols=198 Identities=18% Similarity=0.165 Sum_probs=135.7
Q ss_pred eeceeecCCCceEE--EEEeeCCC--CCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCC-----
Q 015669 178 RRGIVYGDQPRNRL--DLYFPKSS--DGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGT----- 248 (403)
Q Consensus 178 ~~~i~y~~~~~~~l--~vy~P~~~--~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~----- 248 (403)
.+.+.|...++..+ -++.|.+. .++.|+|||+|||.+..-. ..+....+.|+.+||+|+.+||||..+..
T Consensus 365 ~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~-~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~ 443 (620)
T COG1506 365 PEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVG-YSFNPEIQVLASAGYAVLAPNYRGSTGYGREFAD 443 (620)
T ss_pred ceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccc-cccchhhHHHhcCCeEEEEeCCCCCCccHHHHHH
Confidence 35666777666444 45667653 3447999999999644333 45566778899999999999999865421
Q ss_pred ------chhhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeecc
Q 015669 249 ------IKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSG 322 (403)
Q Consensus 249 ------~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg 322 (403)
....++|+.++++|+.+.. .+|++||+|+|+|+||+++++++.+. ..+++.+...+
T Consensus 444 ~~~~~~g~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~SyGGymtl~~~~~~---------------~~f~a~~~~~~ 505 (620)
T COG1506 444 AIRGDWGGVDLEDLIAAVDALVKLP---LVDPERIGITGGSYGGYMTLLAATKT---------------PRFKAAVAVAG 505 (620)
T ss_pred hhhhccCCccHHHHHHHHHHHHhCC---CcChHHeEEeccChHHHHHHHHHhcC---------------chhheEEeccC
Confidence 1245899999999886653 48999999999999999999988764 36777777777
Q ss_pred CCChhhhhhhhhhhhhhHHHHhhhhcCchhhhcCCccccccCCCcccccCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhc
Q 015669 323 GYNLFDLVDHFHSRGLYRSIFLSIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADARILQILFKEL 402 (403)
Q Consensus 323 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~~~S~~l~lf~~l 402 (403)
..+...+....... ++.. ......+ ... ....+...+++.++.++.+|+|||||++|..||.+|+++ +|.+|
T Consensus 506 ~~~~~~~~~~~~~~-~~~~-~~~~~~~--~~~--~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~--~~~aL 577 (620)
T COG1506 506 GVDWLLYFGESTEG-LRFD-PEENGGG--PPE--DREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQ--LVDAL 577 (620)
T ss_pred cchhhhhccccchh-hcCC-HHHhCCC--ccc--ChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHH--HHHHH
Confidence 66655433222111 0000 0000000 000 344555666677777888999999999999999999998 66655
No 10
>PRK13604 luxD acyl transferase; Provisional
Probab=99.74 E-value=6.1e-17 Score=156.88 Aligned_cols=190 Identities=15% Similarity=0.111 Sum_probs=121.7
Q ss_pred cCCCceEEEEEe--eCC-CCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCC-CCC--C-----chhh
Q 015669 184 GDQPRNRLDLYF--PKS-SDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNF-PQG--T-----IKDM 252 (403)
Q Consensus 184 ~~~~~~~l~vy~--P~~-~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~-~~~--~-----~~~~ 252 (403)
...++..+..|+ |+. ..++.++||++|| ..+.+..+..++++|+++||.|+.+|+|++ +++ . ....
T Consensus 15 ~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HG---f~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~s~g 91 (307)
T PRK13604 15 CLENGQSIRVWETLPKENSPKKNNTILIASG---FARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTMSIG 91 (307)
T ss_pred EcCCCCEEEEEEEcCcccCCCCCCEEEEeCC---CCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCccccc
Confidence 344566666555 432 3456789999999 445555578899999999999999998864 432 2 2345
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhhh
Q 015669 253 VKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDH 332 (403)
Q Consensus 253 ~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~~ 332 (403)
..|+.++++|++++ +.++|+|+||||||.++..+|.. ..+++++..+|+.++.+....
T Consensus 92 ~~Dl~aaid~lk~~------~~~~I~LiG~SmGgava~~~A~~----------------~~v~~lI~~sp~~~l~d~l~~ 149 (307)
T PRK13604 92 KNSLLTVVDWLNTR------GINNLGLIAASLSARIAYEVINE----------------IDLSFLITAVGVVNLRDTLER 149 (307)
T ss_pred HHHHHHHHHHHHhc------CCCceEEEEECHHHHHHHHHhcC----------------CCCCEEEEcCCcccHHHHHHH
Confidence 89999999999874 23689999999999998655532 248889999999987765542
Q ss_pred hhhhhhh--H-HHHhhh--hcCc-----hhhh---cCCccccccCCCcccccCCCCcEEEEEeCCCCCCCHHHHHHHHHH
Q 015669 333 FHSRGLY--R-SIFLSI--MDGE-----ESLR---QYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADARILQILF 399 (403)
Q Consensus 333 ~~~~~~~--~-~~~~~~--~~~~-----~~~~---~~sp~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~~~S~~l~lf 399 (403)
....... . ...... ..+. ..+. ...+. ....+++.+..+..|+|+|||++|..||++.+++ +|
T Consensus 150 ~~~~~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~--~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~--l~ 225 (307)
T PRK13604 150 ALGYDYLSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWD--TLDSTINKMKGLDIPFIAFTANNDSWVKQSEVID--LL 225 (307)
T ss_pred hhhcccccCcccccccccccccccccHHHHHHHHHhcCcc--ccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHH--HH
Confidence 1111000 0 000000 0000 0000 00111 0112234444556799999999999999999997 66
Q ss_pred Hhc
Q 015669 400 KEL 402 (403)
Q Consensus 400 ~~l 402 (403)
+++
T Consensus 226 e~~ 228 (307)
T PRK13604 226 DSI 228 (307)
T ss_pred HHh
Confidence 654
No 11
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=99.74 E-value=4.3e-18 Score=179.19 Aligned_cols=134 Identities=27% Similarity=0.365 Sum_probs=105.0
Q ss_pred hhhhhcCCcccccccccccccceeeceeecCCCceEEEEEeeCCCCCC-CcEEEEEcCCcccCCccccc-hHHHH-HHHh
Q 015669 155 CYSLLLLPGFIQVGCHYFFSSQVRRGIVYGDQPRNRLDLYFPKSSDGP-KPVVAFITGGAWIIGYKAWG-SLLGQ-QLSE 231 (403)
Q Consensus 155 ~~a~~~~p~~~q~~~~~~~~~~~~~~i~y~~~~~~~l~vy~P~~~~~~-~PvVV~iHGGg~~~g~~~~~-~~~~~-~La~ 231 (403)
..++.+.|.|.|....... ....+++||++++||.|+...+. .||+||||||++..|+.... ..... .+..
T Consensus 69 ~~at~~~~~C~q~~~~~~~------~~~~~sEDCLylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~ 142 (545)
T KOG1516|consen 69 LDATKYGPACPQNDELTGQ------NRVFGSEDCLYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLL 142 (545)
T ss_pred cccccCCCCCCCccccccc------cCCCCcCCCceEEEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhcccc
Confidence 3457788888886543211 03446788999999999875433 99999999999998886433 22223 3344
Q ss_pred CCCeEEEecccCCCCCCch---------hhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHH
Q 015669 232 RDIIVACIDYRNFPQGTIK---------DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294 (403)
Q Consensus 232 ~G~~Vv~~dyR~~~~~~~~---------~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~ 294 (403)
++++||+++||++..|++. ..+.|+..|++|+++++..||+||++|+|+|||+||.++..+++
T Consensus 143 ~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~ 214 (545)
T KOG1516|consen 143 KDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTL 214 (545)
T ss_pred CCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhc
Confidence 5899999999998777654 24889999999999999999999999999999999999987765
No 12
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.72 E-value=8.3e-17 Score=149.16 Aligned_cols=174 Identities=16% Similarity=0.150 Sum_probs=104.3
Q ss_pred EEEeeCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCC--C---c--------hhhHHHHHH
Q 015669 192 DLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQG--T---I--------KDMVKDASQ 258 (403)
Q Consensus 192 ~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~--~---~--------~~~~~D~~~ 258 (403)
.+|+|++..+++|+||++||+++..........+...+.+.||+|+.+|+|+.... . + .....|+..
T Consensus 2 ~ly~P~~~~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (212)
T TIGR01840 2 YVYVPAGLTGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQ 81 (212)
T ss_pred EEEcCCCCCCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHH
Confidence 57889876678999999999775433221111244444456999999999985321 1 1 123556666
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhh--hhhhhhhh
Q 015669 259 GISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFD--LVDHFHSR 336 (403)
Q Consensus 259 al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~--~~~~~~~~ 336 (403)
.++++.+ ++++|+++|+|+|+|+||.+++.++... +..+++++.++|...... .......
T Consensus 82 ~i~~~~~---~~~id~~~i~l~G~S~Gg~~a~~~a~~~--------------p~~~~~~~~~~g~~~~~~~~~~~~~~~- 143 (212)
T TIGR01840 82 LIDAVKA---NYSIDPNRVYVTGLSAGGGMTAVLGCTY--------------PDVFAGGASNAGLPYGEASSSISATPQ- 143 (212)
T ss_pred HHHHHHH---hcCcChhheEEEEECHHHHHHHHHHHhC--------------chhheEEEeecCCcccccccchhhHhh-
Confidence 7777765 4679999999999999999999988765 345677777776432110 0000000
Q ss_pred hhhHHHHhhhhcCchhhhcCCccccccCCCcccccCCCCcEEEEEeCCCCCCCHHHHHHH
Q 015669 337 GLYRSIFLSIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADARILQ 396 (403)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~~~S~~l 396 (403)
. . .......+....... ........||++|+||++|.+||++.++++
T Consensus 144 -----~-~-~~~~~~~~~~~~~~~------~~~~~~~~p~~~i~hG~~D~vVp~~~~~~~ 190 (212)
T TIGR01840 144 -----M-C-TAATAASVCRLVRGM------QSEYNGPTPIMSVVHGDADYTVLPGNADEI 190 (212)
T ss_pred -----c-C-CCCCHHHHHHHHhcc------CCcccCCCCeEEEEEcCCCceeCcchHHHH
Confidence 0 0 000000000000000 001112346789999999999999999973
No 13
>PRK10566 esterase; Provisional
Probab=99.67 E-value=1.4e-15 Score=143.39 Aligned_cols=98 Identities=19% Similarity=0.130 Sum_probs=70.7
Q ss_pred EEeeCCC-CCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCC-------ch-------hhHHHHH
Q 015669 193 LYFPKSS-DGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGT-------IK-------DMVKDAS 257 (403)
Q Consensus 193 vy~P~~~-~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~-------~~-------~~~~D~~ 257 (403)
.|.|... +++.|+||++||. .++...+..+++.|+++||.|+++|||+++... +. ..+.|+.
T Consensus 16 ~~~p~~~~~~~~p~vv~~HG~---~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (249)
T PRK10566 16 HAFPAGQRDTPLPTVFFYHGF---TSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFP 92 (249)
T ss_pred EEcCCCCCCCCCCEEEEeCCC---CcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHH
Confidence 4556542 4567999999994 345556677889999999999999999865321 11 1245555
Q ss_pred HHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHH
Q 015669 258 QGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 258 ~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
++++|+.+. ..+|+++|+++|+|+||.+++.++...
T Consensus 93 ~~~~~l~~~---~~~~~~~i~v~G~S~Gg~~al~~~~~~ 128 (249)
T PRK10566 93 TLRAAIREE---GWLLDDRLAVGGASMGGMTALGIMARH 128 (249)
T ss_pred HHHHHHHhc---CCcCccceeEEeecccHHHHHHHHHhC
Confidence 666666542 247889999999999999999887653
No 14
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.67 E-value=3.1e-16 Score=145.00 Aligned_cols=150 Identities=24% Similarity=0.329 Sum_probs=101.4
Q ss_pred HHHHHHHhCCCeEEEecccCCCCCC----------c-hhhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHH
Q 015669 224 LLGQQLSERDIIVACIDYRNFPQGT----------I-KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACT 292 (403)
Q Consensus 224 ~~~~~La~~G~~Vv~~dyR~~~~~~----------~-~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~ 292 (403)
....+|+++||+|+.+|||++++.. + ...+.|+.++++|+.++. .+|++||+|+|+|+||++++.+
T Consensus 5 ~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~---~iD~~ri~i~G~S~GG~~a~~~ 81 (213)
T PF00326_consen 5 WNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQY---YIDPDRIGIMGHSYGGYLALLA 81 (213)
T ss_dssp HHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTT---SEEEEEEEEEEETHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccc---cccceeEEEEcccccccccchh
Confidence 4567889999999999999976421 1 234788888888887653 6899999999999999999998
Q ss_pred HHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhhhhhhhhhhH-HHH--hhhhcCchhhhcCCccccccCCCccc
Q 015669 293 LLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDHFHSRGLYR-SIF--LSIMDGEESLRQYSPEVLVQDPNTRH 369 (403)
Q Consensus 293 a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~sp~~~~~~~~~~~ 369 (403)
+... +..+++++..+|.+|+......... +.. ... .......+.....+|.. .
T Consensus 82 ~~~~--------------~~~f~a~v~~~g~~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~~--------~ 137 (213)
T PF00326_consen 82 ATQH--------------PDRFKAAVAGAGVSDLFSYYGTTDI--YTKAEYLEYGDPWDNPEFYRELSPIS--------P 137 (213)
T ss_dssp HHHT--------------CCGSSEEEEESE-SSTTCSBHHTCC--HHHGHHHHHSSTTTSHHHHHHHHHGG--------G
T ss_pred hccc--------------ceeeeeeeccceecchhcccccccc--cccccccccCccchhhhhhhhhcccc--------c
Confidence 8753 4678999999999988766544211 111 011 11111122222223322 2
Q ss_pred ccC--CCCcEEEEEeCCCCCCCHHHHHHHHHHHhc
Q 015669 370 AVS--LLPPIILFHGTADYSIPADARILQILFKEL 402 (403)
Q Consensus 370 ~~~--~~pPvLIiHG~~D~vVP~~~S~~l~lf~~l 402 (403)
+.. ..+|+||+||++|++||++++++ ++++|
T Consensus 138 ~~~~~~~~P~li~hG~~D~~Vp~~~s~~--~~~~L 170 (213)
T PF00326_consen 138 ADNVQIKPPVLIIHGENDPRVPPSQSLR--LYNAL 170 (213)
T ss_dssp GGGCGGGSEEEEEEETTBSSSTTHHHHH--HHHHH
T ss_pred cccccCCCCEEEEccCCCCccCHHHHHH--HHHHH
Confidence 222 45899999999999999999998 65554
No 15
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.67 E-value=3.8e-15 Score=146.78 Aligned_cols=117 Identities=14% Similarity=0.060 Sum_probs=81.2
Q ss_pred eEEEEEeeCCCCCCCcEEEEEcCCcccCCccc-cchHHHHHHHhCCCeEEEecccCCCCCCc--------hhhHHHHHHH
Q 015669 189 NRLDLYFPKSSDGPKPVVAFITGGAWIIGYKA-WGSLLGQQLSERDIIVACIDYRNFPQGTI--------KDMVKDASQG 259 (403)
Q Consensus 189 ~~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~-~~~~~~~~La~~G~~Vv~~dyR~~~~~~~--------~~~~~D~~~a 259 (403)
+....|.|.....++++||++||.+ ++.. .+..++..|+++||.|+++|+||++.+.. .....|+.++
T Consensus 45 l~~~~~~~~~~~~~~~~VvllHG~~---~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~ 121 (330)
T PLN02298 45 LFTRSWLPSSSSPPRALIFMVHGYG---NDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSF 121 (330)
T ss_pred EEEEEEecCCCCCCceEEEEEcCCC---CCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHH
Confidence 4556677754335678999999943 2223 24456678888999999999999876532 2346777777
Q ss_pred HHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCC
Q 015669 260 ISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYN 325 (403)
Q Consensus 260 l~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d 325 (403)
++++.... ..+..+++|+||||||.+++.++... +..++++|.+++...
T Consensus 122 i~~l~~~~---~~~~~~i~l~GhSmGG~ia~~~a~~~--------------p~~v~~lvl~~~~~~ 170 (330)
T PLN02298 122 FNSVKQRE---EFQGLPRFLYGESMGGAICLLIHLAN--------------PEGFDGAVLVAPMCK 170 (330)
T ss_pred HHHHHhcc---cCCCCCEEEEEecchhHHHHHHHhcC--------------cccceeEEEeccccc
Confidence 77776532 12334799999999999999877643 345777777766543
No 16
>PRK10115 protease 2; Provisional
Probab=99.66 E-value=2e-15 Score=162.68 Aligned_cols=197 Identities=15% Similarity=0.106 Sum_probs=132.5
Q ss_pred eeeceeecCCCceEEEE--EeeCC--CCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCc---
Q 015669 177 VRRGIVYGDQPRNRLDL--YFPKS--SDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTI--- 249 (403)
Q Consensus 177 ~~~~i~y~~~~~~~l~v--y~P~~--~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~--- 249 (403)
..+.+.|.+.|+..+.+ .++++ ..++.|+||++|||...... ..+......|+++||+|+.+|+||+++..-
T Consensus 415 ~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~-p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~ 493 (686)
T PRK10115 415 RSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASID-ADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWY 493 (686)
T ss_pred EEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCC-CCccHHHHHHHHCCcEEEEEEcCCCCccCHHHH
Confidence 34666777777766654 33332 34567999999997543333 334444467889999999999999655321
Q ss_pred --------hhhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeec
Q 015669 250 --------KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLS 321 (403)
Q Consensus 250 --------~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~is 321 (403)
...+.|+.++++|+.++- -.|++|++++|.|+||.++..++.+. +..++++|...
T Consensus 494 ~~g~~~~k~~~~~D~~a~~~~Lv~~g---~~d~~rl~i~G~S~GG~l~~~~~~~~--------------Pdlf~A~v~~v 556 (686)
T PRK10115 494 EDGKFLKKKNTFNDYLDACDALLKLG---YGSPSLCYGMGGSAGGMLMGVAINQR--------------PELFHGVIAQV 556 (686)
T ss_pred HhhhhhcCCCcHHHHHHHHHHHHHcC---CCChHHeEEEEECHHHHHHHHHHhcC--------------hhheeEEEecC
Confidence 134889999999998652 37999999999999999999877653 46799999999
Q ss_pred cCCChhhhhh--hhh-hhhhhHHHHhhhhcC--chhhhcCCccccccCCCcccccCCCCc-EEEEEeCCCCCCCHHHHHH
Q 015669 322 GGYNLFDLVD--HFH-SRGLYRSIFLSIMDG--EESLRQYSPEVLVQDPNTRHAVSLLPP-IILFHGTADYSIPADARIL 395 (403)
Q Consensus 322 g~~d~~~~~~--~~~-~~~~~~~~~~~~~~~--~~~~~~~sp~~~~~~~~~~~~~~~~pP-vLIiHG~~D~vVP~~~S~~ 395 (403)
|+.|+...+. ... .... ...++..... .+.+..++|...+. +...| +||+||.+|..||+.++.+
T Consensus 557 p~~D~~~~~~~~~~p~~~~~-~~e~G~p~~~~~~~~l~~~SP~~~v~--------~~~~P~lLi~~g~~D~RV~~~~~~k 627 (686)
T PRK10115 557 PFVDVVTTMLDESIPLTTGE-FEEWGNPQDPQYYEYMKSYSPYDNVT--------AQAYPHLLVTTGLHDSQVQYWEPAK 627 (686)
T ss_pred CchhHhhhcccCCCCCChhH-HHHhCCCCCHHHHHHHHHcCchhccC--------ccCCCceeEEecCCCCCcCchHHHH
Confidence 9999876531 111 1111 1111222111 12234456655443 33356 7788999999999999998
Q ss_pred HHHHHhc
Q 015669 396 QILFKEL 402 (403)
Q Consensus 396 l~lf~~l 402 (403)
++++|
T Consensus 628 --~~a~L 632 (686)
T PRK10115 628 --WVAKL 632 (686)
T ss_pred --HHHHH
Confidence 66655
No 17
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.63 E-value=2.5e-15 Score=134.93 Aligned_cols=184 Identities=21% Similarity=0.284 Sum_probs=140.3
Q ss_pred eeceeecCCCceEEEEEeeCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCC-CchhhHHHH
Q 015669 178 RRGIVYGDQPRNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQG-TIKDMVKDA 256 (403)
Q Consensus 178 ~~~i~y~~~~~~~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~-~~~~~~~D~ 256 (403)
.+++.|+.+++..++||.|.+ ..|+.||||||.|..|+..........+.+.||.|++++|-+.++. .+..-+.|.
T Consensus 45 ~e~l~Yg~~g~q~VDIwg~~~---~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~q~htL~qt~~~~ 121 (270)
T KOG4627|consen 45 VEHLRYGEGGRQLVDIWGSTN---QAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCPQVHTLEQTMTQF 121 (270)
T ss_pred hhccccCCCCceEEEEecCCC---CccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCcccccHHHHHHHH
Confidence 478999999999999999954 4579999999999999998887777777788999999999999887 777888999
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhhhhhhh
Q 015669 257 SQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDHFHSR 336 (403)
Q Consensus 257 ~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~~~~~~ 336 (403)
...++|+.+..+ +.+++.+.|||+||+++..+.++. ..+.+.+++..+|.|++.++.....-.
T Consensus 122 ~~gv~filk~~~----n~k~l~~gGHSaGAHLa~qav~R~-------------r~prI~gl~l~~GvY~l~EL~~te~g~ 184 (270)
T KOG4627|consen 122 THGVNFILKYTE----NTKVLTFGGHSAGAHLAAQAVMRQ-------------RSPRIWGLILLCGVYDLRELSNTESGN 184 (270)
T ss_pred HHHHHHHHHhcc----cceeEEEcccchHHHHHHHHHHHh-------------cCchHHHHHHHhhHhhHHHHhCCcccc
Confidence 999999987643 346899999999999999887764 245788999999999999876543221
Q ss_pred hhhHHHHhhhhcCchhhhcCCccccccCCCcccccCCCCcEEEEEeCCCCCCCHHHHHHH
Q 015669 337 GLYRSIFLSIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADARILQ 396 (403)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~~~S~~l 396 (403)
.+ -...+.....++.. .....+..|+||+-|.+|----++|.+.+
T Consensus 185 dl--------gLt~~~ae~~Scdl-------~~~~~v~~~ilVv~~~~espklieQnrdf 229 (270)
T KOG4627|consen 185 DL--------GLTERNAESVSCDL-------WEYTDVTVWILVVAAEHESPKLIEQNRDF 229 (270)
T ss_pred cc--------CcccchhhhcCccH-------HHhcCceeeeeEeeecccCcHHHHhhhhH
Confidence 11 00111122222221 12223345899999999998888888864
No 18
>PHA02857 monoglyceride lipase; Provisional
Probab=99.61 E-value=2.7e-14 Score=136.70 Aligned_cols=115 Identities=19% Similarity=0.135 Sum_probs=82.8
Q ss_pred CceEEEEEeeCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCc--------hhhHHHHHH
Q 015669 187 PRNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTI--------KDMVKDASQ 258 (403)
Q Consensus 187 ~~~~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~--------~~~~~D~~~ 258 (403)
..+...+|.|. ..++++|+++||. .++...+..++..|+++||.|+++|+||++.+.. ...+.|+..
T Consensus 11 ~~l~~~~~~~~--~~~~~~v~llHG~---~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~ 85 (276)
T PHA02857 11 DYIYCKYWKPI--TYPKALVFISHGA---GEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQ 85 (276)
T ss_pred CEEEEEeccCC--CCCCEEEEEeCCC---ccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHH
Confidence 34677888885 3456899999994 3455667778899999999999999999876432 123556656
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCC
Q 015669 259 GISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYN 325 (403)
Q Consensus 259 al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d 325 (403)
.++++++. ...++++|+|||+||.+|+.++... +..+++++.+++..+
T Consensus 86 ~l~~~~~~-----~~~~~~~lvG~S~GG~ia~~~a~~~--------------p~~i~~lil~~p~~~ 133 (276)
T PHA02857 86 HVVTIKST-----YPGVPVFLLGHSMGATISILAAYKN--------------PNLFTAMILMSPLVN 133 (276)
T ss_pred HHHHHHhh-----CCCCCEEEEEcCchHHHHHHHHHhC--------------ccccceEEEeccccc
Confidence 66555432 2235899999999999999887653 345788888877544
No 19
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.61 E-value=2.7e-14 Score=145.53 Aligned_cols=196 Identities=18% Similarity=0.131 Sum_probs=112.8
Q ss_pred eceeecCCCc--eEEEEEeeCCCCCCCcEEEEEcCCcccCCcc-ccchHHHHHHHhCCCeEEEecccCCCCCCc----hh
Q 015669 179 RGIVYGDQPR--NRLDLYFPKSSDGPKPVVAFITGGAWIIGYK-AWGSLLGQQLSERDIIVACIDYRNFPQGTI----KD 251 (403)
Q Consensus 179 ~~i~y~~~~~--~~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~-~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~----~~ 251 (403)
+.+.+...++ +...++.|+ ..++.|+||++||.+ +.. ..+..++..|+++||.|+++|+|+.+.+.. .+
T Consensus 169 e~v~i~~~~g~~l~g~l~~P~-~~~~~P~Vli~gG~~---~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~d 244 (414)
T PRK05077 169 KELEFPIPGGGPITGFLHLPK-GDGPFPTVLVCGGLD---SLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQD 244 (414)
T ss_pred EEEEEEcCCCcEEEEEEEECC-CCCCccEEEEeCCcc---cchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCcccc
Confidence 4444433333 556667787 456788888766622 222 234456788999999999999998766532 12
Q ss_pred hHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCC-hhhhh
Q 015669 252 MVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYN-LFDLV 330 (403)
Q Consensus 252 ~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d-~~~~~ 330 (403)
......++++|+.+.. .+|+++|+++|+|+||++++.++... +..++++|.+++.++ +....
T Consensus 245 ~~~~~~avld~l~~~~---~vd~~ri~l~G~S~GG~~Al~~A~~~--------------p~ri~a~V~~~~~~~~~~~~~ 307 (414)
T PRK05077 245 SSLLHQAVLNALPNVP---WVDHTRVAAFGFRFGANVAVRLAYLE--------------PPRLKAVACLGPVVHTLLTDP 307 (414)
T ss_pred HHHHHHHHHHHHHhCc---ccCcccEEEEEEChHHHHHHHHHHhC--------------CcCceEEEEECCccchhhcch
Confidence 2223346677776542 36889999999999999999888653 346888888887654 11111
Q ss_pred hhhhhh-hhhHHHHhhhhc----CchhhhcCCccccccCCCcccccCCCCcEEEEEeCCCCCCCHHHHHHH
Q 015669 331 DHFHSR-GLYRSIFLSIMD----GEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADARILQ 396 (403)
Q Consensus 331 ~~~~~~-~~~~~~~~~~~~----~~~~~~~~sp~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~~~S~~l 396 (403)
...... ..+...+...+. ..+.+.............. -..++..|+|++||++|++||+++++.+
T Consensus 308 ~~~~~~p~~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~-l~~~i~~PvLiI~G~~D~ivP~~~a~~l 377 (414)
T PRK05077 308 KRQQQVPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGL-LGRRCPTPMLSGYWKNDPFSPEEDSRLI 377 (414)
T ss_pred hhhhhchHHHHHHHHHHhCCCCCChHHHHHHhhhccchhhhh-hccCCCCcEEEEecCCCCCCCHHHHHHH
Confidence 111000 001111111111 0000000000000000000 0134567999999999999999999974
No 20
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.60 E-value=8.6e-15 Score=136.54 Aligned_cols=166 Identities=20% Similarity=0.238 Sum_probs=117.6
Q ss_pred EEEEEeeCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhC-CCeEEEecccCCCCCCch----hhHHHHHHHHHHHH
Q 015669 190 RLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSER-DIIVACIDYRNFPQGTIK----DMVKDASQGISFVC 264 (403)
Q Consensus 190 ~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~-G~~Vv~~dyR~~~~~~~~----~~~~D~~~al~~l~ 264 (403)
....|+-.. ....++++|.||.+. +...+..+...|..+ ++.|+++||+|++.+... ....|+.++.+|++
T Consensus 48 ~~~~y~~~~-~~~~~~lly~hGNa~---Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr 123 (258)
T KOG1552|consen 48 IVCMYVRPP-EAAHPTLLYSHGNAA---DLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLR 123 (258)
T ss_pred EEEEEEcCc-cccceEEEEcCCccc---chHHHHHHHHHHhhcccceEEEEecccccccCCCcccccchhhHHHHHHHHH
Confidence 444544322 235689999999543 333555666677665 999999999998776543 46899999999998
Q ss_pred HhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhhhhhhhhhhHHHHh
Q 015669 265 NNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDHFHSRGLYRSIFL 344 (403)
Q Consensus 265 ~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~~~~~~~~~~~~~~ 344 (403)
+. +| .+++|+|+|+|+|...++.+|.+. ++.++|..+++.+..+++-......+ .
T Consensus 124 ~~---~g-~~~~Iil~G~SiGt~~tv~Lasr~----------------~~~alVL~SPf~S~~rv~~~~~~~~~---~-- 178 (258)
T KOG1552|consen 124 NR---YG-SPERIILYGQSIGTVPTVDLASRY----------------PLAAVVLHSPFTSGMRVAFPDTKTTY---C-- 178 (258)
T ss_pred hh---cC-CCceEEEEEecCCchhhhhHhhcC----------------CcceEEEeccchhhhhhhccCcceEE---e--
Confidence 85 34 679999999999999988888654 27889999987776554322111000 0
Q ss_pred hhhcCchhhhcCCccccccCCCcccccCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhc
Q 015669 345 SIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADARILQILFKEL 402 (403)
Q Consensus 345 ~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~~~S~~l~lf~~l 402 (403)
.+.+ ..++.+..+..|+||+||++|++||++++++ ||+..
T Consensus 179 --------~d~f--------~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~--Lye~~ 218 (258)
T KOG1552|consen 179 --------FDAF--------PNIEKISKITCPVLIIHGTDDEVVDFSHGKA--LYERC 218 (258)
T ss_pred --------eccc--------cccCcceeccCCEEEEecccCceecccccHH--HHHhc
Confidence 0011 1134445566899999999999999999998 77754
No 21
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.59 E-value=4e-14 Score=134.64 Aligned_cols=108 Identities=18% Similarity=0.147 Sum_probs=79.5
Q ss_pred ceEEEEEeeCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCc--------hhhHHHHHHH
Q 015669 188 RNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTI--------KDMVKDASQG 259 (403)
Q Consensus 188 ~~~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~--------~~~~~D~~~a 259 (403)
.+....|.|...++++..|+++||.|. -+...+..++..|+..||.|+++||+|++.+.. ...+.|+..-
T Consensus 39 ~lft~~W~p~~~~~pr~lv~~~HG~g~--~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~ 116 (313)
T KOG1455|consen 39 KLFTQSWLPLSGTEPRGLVFLCHGYGE--HSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISF 116 (313)
T ss_pred EeEEEecccCCCCCCceEEEEEcCCcc--cchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHH
Confidence 367788999876688899999999442 223456778899999999999999999876542 2346666666
Q ss_pred HHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHh
Q 015669 260 ISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKE 300 (403)
Q Consensus 260 l~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~ 300 (403)
++.++.+.+.-+ -..+++||||||.+++.++..++...
T Consensus 117 ~~~i~~~~e~~~---lp~FL~GeSMGGAV~Ll~~~k~p~~w 154 (313)
T KOG1455|consen 117 FDSIKEREENKG---LPRFLFGESMGGAVALLIALKDPNFW 154 (313)
T ss_pred HHHHhhccccCC---CCeeeeecCcchHHHHHHHhhCCccc
Confidence 665555433222 37899999999999999988754433
No 22
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.59 E-value=2.5e-14 Score=122.93 Aligned_cols=130 Identities=26% Similarity=0.369 Sum_probs=95.6
Q ss_pred EEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchhhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCc
Q 015669 205 VVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSA 284 (403)
Q Consensus 205 vVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~ 284 (403)
+||++||++ ++...+..+++.|+++||.|+.+|||+.... ....+..+.++++.. .+. |+++|+++|+|+
T Consensus 1 ~vv~~HG~~---~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~---~~~-~~~~i~l~G~S~ 70 (145)
T PF12695_consen 1 VVVLLHGWG---GSRRDYQPLAEALAEQGYAVVAFDYPGHGDS---DGADAVERVLADIRA---GYP-DPDRIILIGHSM 70 (145)
T ss_dssp EEEEECTTT---TTTHHHHHHHHHHHHTTEEEEEESCTTSTTS---HHSHHHHHHHHHHHH---HHC-TCCEEEEEEETH
T ss_pred CEEEECCCC---CCHHHHHHHHHHHHHCCCEEEEEecCCCCcc---chhHHHHHHHHHHHh---hcC-CCCcEEEEEEcc
Confidence 689999954 3556678889999999999999999987665 223355556666542 223 789999999999
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhhhhhhhhhhHHHHhhhhcCchhhhcCCccccccC
Q 015669 285 GAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDHFHSRGLYRSIFLSIMDGEESLRQYSPEVLVQD 364 (403)
Q Consensus 285 GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~ 364 (403)
||.+++.++... ..+++++.++++.+..
T Consensus 71 Gg~~a~~~~~~~---------------~~v~~~v~~~~~~~~~------------------------------------- 98 (145)
T PF12695_consen 71 GGAIAANLAARN---------------PRVKAVVLLSPYPDSE------------------------------------- 98 (145)
T ss_dssp HHHHHHHHHHHS---------------TTESEEEEESESSGCH-------------------------------------
T ss_pred CcHHHHHHhhhc---------------cceeEEEEecCccchh-------------------------------------
Confidence 999999888742 5789999988831100
Q ss_pred CCcccccCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhc
Q 015669 365 PNTRHAVSLLPPIILFHGTADYSIPADARILQILFKEL 402 (403)
Q Consensus 365 ~~~~~~~~~~pPvLIiHG~~D~vVP~~~S~~l~lf~~l 402 (403)
.+.....|++++||++|.++|+++.++ +|+++
T Consensus 99 ----~~~~~~~pv~~i~g~~D~~~~~~~~~~--~~~~~ 130 (145)
T PF12695_consen 99 ----DLAKIRIPVLFIHGENDPLVPPEQVRR--LYEAL 130 (145)
T ss_dssp ----HHTTTTSEEEEEEETT-SSSHHHHHHH--HHHHH
T ss_pred ----hhhccCCcEEEEEECCCCcCCHHHHHH--HHHHc
Confidence 001112499999999999999999987 66554
No 23
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.58 E-value=7.1e-14 Score=139.10 Aligned_cols=101 Identities=23% Similarity=0.254 Sum_probs=69.7
Q ss_pred eEEEEEeeCCCCCCCcEEEEEcCCcccCCccc-cchHHHHHHHhCCCeEEEecccCCCCCCc--------hhhHHHHHHH
Q 015669 189 NRLDLYFPKSSDGPKPVVAFITGGAWIIGYKA-WGSLLGQQLSERDIIVACIDYRNFPQGTI--------KDMVKDASQG 259 (403)
Q Consensus 189 ~~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~-~~~~~~~~La~~G~~Vv~~dyR~~~~~~~--------~~~~~D~~~a 259 (403)
+....|.|.+ .+++|+|||+||.+ ++.. ++..++..|+++||.|+++||||++.+.. .....|+.+.
T Consensus 74 l~~~~~~p~~-~~~~~~iv~lHG~~---~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~ 149 (349)
T PLN02385 74 IFSKSWLPEN-SRPKAAVCFCHGYG---DTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEH 149 (349)
T ss_pred EEEEEEecCC-CCCCeEEEEECCCC---CccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHH
Confidence 4556677754 35678999999943 2322 34567788988899999999999875532 2234455555
Q ss_pred HHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHH
Q 015669 260 ISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 260 l~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
++++.... ..+..+++|+||||||.+++.++...
T Consensus 150 l~~l~~~~---~~~~~~~~LvGhSmGG~val~~a~~~ 183 (349)
T PLN02385 150 YSKIKGNP---EFRGLPSFLFGQSMGGAVALKVHLKQ 183 (349)
T ss_pred HHHHHhcc---ccCCCCEEEEEeccchHHHHHHHHhC
Confidence 55443221 23345899999999999999888765
No 24
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.51 E-value=3.8e-13 Score=129.76 Aligned_cols=177 Identities=17% Similarity=0.179 Sum_probs=102.3
Q ss_pred eEEEEEeeCC-CCCCCcEEEEEcCCcccCCccccchH--HHHHHHh-CCCeEEEecc--cCCCC-------------CCc
Q 015669 189 NRLDLYFPKS-SDGPKPVVAFITGGAWIIGYKAWGSL--LGQQLSE-RDIIVACIDY--RNFPQ-------------GTI 249 (403)
Q Consensus 189 ~~l~vy~P~~-~~~~~PvVV~iHGGg~~~g~~~~~~~--~~~~La~-~G~~Vv~~dy--R~~~~-------------~~~ 249 (403)
..+.+|+|+. ..++.|+|+++||.+ ++...+.. ....+++ .|++||++|+ |+... +.+
T Consensus 27 ~~~~v~~P~~~~~~~~P~vvllHG~~---~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~ 103 (275)
T TIGR02821 27 MTFGVFLPPQAAAGPVPVLWYLSGLT---CTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFY 103 (275)
T ss_pred eEEEEEcCCCccCCCCCEEEEccCCC---CCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCcccc
Confidence 4578999975 245689999999954 23322221 2234544 5999999998 44321 000
Q ss_pred h--------hhHHHHHHHHHHHHHhhhh-cCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeee
Q 015669 250 K--------DMVKDASQGISFVCNNISE-YGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGL 320 (403)
Q Consensus 250 ~--------~~~~D~~~al~~l~~~~~~-~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~i 320 (403)
. ....+.....+.+...+++ +++|+++++|+|+||||++++.+++.. +..+++++.+
T Consensus 104 ~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~--------------p~~~~~~~~~ 169 (275)
T TIGR02821 104 VDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKN--------------PDRFKSVSAF 169 (275)
T ss_pred ccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhC--------------cccceEEEEE
Confidence 0 0011122223333333333 578889999999999999999998764 3567888888
Q ss_pred ccCCChhhhhhhhhhhhhhHHHHhhhhcC-chhhhcCCccccccCCCcccccCCCCcEEEEEeCCCCCCCH-HHHHH
Q 015669 321 SGGYNLFDLVDHFHSRGLYRSIFLSIMDG-EESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPA-DARIL 395 (403)
Q Consensus 321 sg~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~sp~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~-~~S~~ 395 (403)
++.++.... .. ....+...+.. .+.+...++..... .....+|++|.||++|+.||. +++..
T Consensus 170 ~~~~~~~~~-~~------~~~~~~~~l~~~~~~~~~~~~~~~~~------~~~~~~plli~~G~~D~~v~~~~~~~~ 233 (275)
T TIGR02821 170 APIVAPSRC-PW------GQKAFSAYLGADEAAWRSYDASLLVA------DGGRHSTILIDQGTADQFLDEQLRPDA 233 (275)
T ss_pred CCccCcccC-cc------hHHHHHHHhcccccchhhcchHHHHh------hcccCCCeeEeecCCCcccCccccHHH
Confidence 887765321 10 01111111111 11122222222211 112457999999999999999 56665
No 25
>PRK10749 lysophospholipase L2; Provisional
Probab=99.51 E-value=2.7e-13 Score=134.05 Aligned_cols=101 Identities=20% Similarity=0.058 Sum_probs=69.5
Q ss_pred CCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCc-------------hhhHHHHHHHHHHHHHhh
Q 015669 201 GPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTI-------------KDMVKDASQGISFVCNNI 267 (403)
Q Consensus 201 ~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~-------------~~~~~D~~~al~~l~~~~ 267 (403)
++.++||++|| ..++...+..++..|+++||.|+++|+||.+.+.. .....|+.+.++.+..
T Consensus 52 ~~~~~vll~HG---~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-- 126 (330)
T PRK10749 52 HHDRVVVICPG---RIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQ-- 126 (330)
T ss_pred CCCcEEEEECC---ccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHh--
Confidence 35579999999 34555566778888999999999999999876532 1223344333333221
Q ss_pred hhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccC
Q 015669 268 SEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGG 323 (403)
Q Consensus 268 ~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~ 323 (403)
..+..+++++||||||.+++.++... +..++++|.+++.
T Consensus 127 ---~~~~~~~~l~GhSmGG~ia~~~a~~~--------------p~~v~~lvl~~p~ 165 (330)
T PRK10749 127 ---PGPYRKRYALAHSMGGAILTLFLQRH--------------PGVFDAIALCAPM 165 (330)
T ss_pred ---cCCCCCeEEEEEcHHHHHHHHHHHhC--------------CCCcceEEEECch
Confidence 12346899999999999999888654 3456666666654
No 26
>PLN02442 S-formylglutathione hydrolase
Probab=99.50 E-value=3.2e-13 Score=130.93 Aligned_cols=177 Identities=17% Similarity=0.185 Sum_probs=101.8
Q ss_pred eEEEEEeeCC-CCCCCcEEEEEcCCcccCCccccc---hHHHHHHHhCCCeEEEecccCCC---------------CCCc
Q 015669 189 NRLDLYFPKS-SDGPKPVVAFITGGAWIIGYKAWG---SLLGQQLSERDIIVACIDYRNFP---------------QGTI 249 (403)
Q Consensus 189 ~~l~vy~P~~-~~~~~PvVV~iHGGg~~~g~~~~~---~~~~~~La~~G~~Vv~~dyR~~~---------------~~~~ 249 (403)
..+.+|+|+. ..+++|||+++||++ ++...+ ..+...++..|++|+.+|....+ .+.+
T Consensus 32 ~~~~vy~P~~~~~~~~Pvv~~lHG~~---~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~ 108 (283)
T PLN02442 32 MTFSVYFPPASDSGKVPVLYWLSGLT---CTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFY 108 (283)
T ss_pred eEEEEEcCCcccCCCCCEEEEecCCC---cChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCccee
Confidence 5788999974 245789999999954 232222 22335556679999999964321 0000
Q ss_pred -----h-----hhHH-HHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceee
Q 015669 250 -----K-----DMVK-DASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYF 318 (403)
Q Consensus 250 -----~-----~~~~-D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v 318 (403)
+ .... .......++.+... .+|+++++|+|+||||++|+.++... +..+++++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~--~~~~~~~~i~G~S~GG~~a~~~a~~~--------------p~~~~~~~ 172 (283)
T PLN02442 109 LNATQEKWKNWRMYDYVVKELPKLLSDNFD--QLDTSRASIFGHSMGGHGALTIYLKN--------------PDKYKSVS 172 (283)
T ss_pred eccccCCCcccchhhhHHHHHHHHHHHHHH--hcCCCceEEEEEChhHHHHHHHHHhC--------------chhEEEEE
Confidence 0 0011 11223344444333 25788999999999999999988764 35678888
Q ss_pred eeccCCChhhhhhhhhhhhhhHHHHhhhhcCchhhhcCCccccccCCCcccccCCCCcEEEEEeCCCCCCCHH-HHHH
Q 015669 319 GLSGGYNLFDLVDHFHSRGLYRSIFLSIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPAD-ARIL 395 (403)
Q Consensus 319 ~isg~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~~-~S~~ 395 (403)
.+++.+++.... +. .......+.. ..+.+....+... +.......+|++|+||++|++||.. +++.
T Consensus 173 ~~~~~~~~~~~~-~~--~~~~~~~~g~---~~~~~~~~d~~~~-----~~~~~~~~~pvli~~G~~D~~v~~~~~s~~ 239 (283)
T PLN02442 173 AFAPIANPINCP-WG--QKAFTNYLGS---DKADWEEYDATEL-----VSKFNDVSATILIDQGEADKFLKEQLLPEN 239 (283)
T ss_pred EECCccCcccCc-hh--hHHHHHHcCC---ChhhHHHcChhhh-----hhhccccCCCEEEEECCCCccccccccHHH
Confidence 888877654211 00 0011111111 1112222222211 2223334579999999999999973 4554
No 27
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.50 E-value=8.3e-13 Score=133.80 Aligned_cols=125 Identities=13% Similarity=0.097 Sum_probs=84.4
Q ss_pred ceeecCCC-ceEEEEEeeCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCc--------h
Q 015669 180 GIVYGDQP-RNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTI--------K 250 (403)
Q Consensus 180 ~i~y~~~~-~~~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~--------~ 250 (403)
.+.|+.+. .+....|.|.. .+++++||++||. .++...+..++..|+++||.|+++|+|+++.+.. .
T Consensus 113 ~~~~~~~~~~l~~~~~~p~~-~~~~~~Vl~lHG~---~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~ 188 (395)
T PLN02652 113 SLFYGARRNALFCRSWAPAA-GEMRGILIIIHGL---NEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLD 188 (395)
T ss_pred EEEECCCCCEEEEEEecCCC-CCCceEEEEECCc---hHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHH
Confidence 34444433 35677888854 3456899999993 3444456778899999999999999999876432 2
Q ss_pred hhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCC
Q 015669 251 DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYN 325 (403)
Q Consensus 251 ~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d 325 (403)
....|+..+++++.... +..+++|+||||||.+++.++... . ....+++++..++...
T Consensus 189 ~~~~Dl~~~l~~l~~~~-----~~~~i~lvGhSmGG~ial~~a~~p-~-----------~~~~v~glVL~sP~l~ 246 (395)
T PLN02652 189 YVVEDTEAFLEKIRSEN-----PGVPCFLFGHSTGGAVVLKAASYP-S-----------IEDKLEGIVLTSPALR 246 (395)
T ss_pred HHHHHHHHHHHHHHHhC-----CCCCEEEEEECHHHHHHHHHHhcc-C-----------cccccceEEEECcccc
Confidence 33567777777765431 224799999999999998655321 0 1135677777776544
No 28
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.49 E-value=3.7e-13 Score=122.59 Aligned_cols=172 Identities=17% Similarity=0.212 Sum_probs=115.3
Q ss_pred cEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCC-------CchhhHHHHHHHHHHHHHhhhhcCCCCCc
Q 015669 204 PVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQG-------TIKDMVKDASQGISFVCNNISEYGGDPDR 276 (403)
Q Consensus 204 PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~-------~~~~~~~D~~~al~~l~~~~~~~g~d~~r 276 (403)
..|+++|| ..|+..+...++++|.++||.|.+|+|+|.+.. ...++.+|+.++.+++.+. |. +.
T Consensus 16 ~AVLllHG---FTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~----gy--~e 86 (243)
T COG1647 16 RAVLLLHG---FTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA----GY--DE 86 (243)
T ss_pred EEEEEEec---cCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc----CC--Ce
Confidence 68999999 789999999999999999999999999986543 2346788999999998764 33 59
Q ss_pred EEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhhhhhhhhhhHHHHhhhhc-C----ch
Q 015669 277 IYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDHFHSRGLYRSIFLSIMD-G----EE 351 (403)
Q Consensus 277 I~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~~~~~~~~~~~~~~~~~~-~----~~ 351 (403)
|.++|.||||.+++.++.+. .+|++|.+|...+...........-.+...+..+.. + .+
T Consensus 87 I~v~GlSmGGv~alkla~~~----------------p~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~ 150 (243)
T COG1647 87 IAVVGLSMGGVFALKLAYHY----------------PPKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDK 150 (243)
T ss_pred EEEEeecchhHHHHHHHhhC----------------CccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHH
Confidence 99999999999999999775 478888888876643221111100000000000000 0 00
Q ss_pred hhhcCC--ccccc------cCCCcccccCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhc
Q 015669 352 SLRQYS--PEVLV------QDPNTRHAVSLLPPIILFHGTADYSIPADARILQILFKEL 402 (403)
Q Consensus 352 ~~~~~s--p~~~~------~~~~~~~~~~~~pPvLIiHG~~D~vVP~~~S~~l~lf~~l 402 (403)
....+. |..-. -....+.+..+..|++|++|.+|++||.+.+.. +|...
T Consensus 151 e~~~~~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~--Iy~~v 207 (243)
T COG1647 151 EMKSYKDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANF--IYDHV 207 (243)
T ss_pred HHHHhhcchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHH--HHHhc
Confidence 111111 11100 111234455667799999999999999999987 66654
No 29
>PRK10985 putative hydrolase; Provisional
Probab=99.48 E-value=2.8e-12 Score=126.52 Aligned_cols=110 Identities=16% Similarity=0.190 Sum_probs=78.2
Q ss_pred CCCCcEEEEEcCCcccCCccc-cchHHHHHHHhCCCeEEEecccCCCCCCc-------hhhHHHHHHHHHHHHHhhhhcC
Q 015669 200 DGPKPVVAFITGGAWIIGYKA-WGSLLGQQLSERDIIVACIDYRNFPQGTI-------KDMVKDASQGISFVCNNISEYG 271 (403)
Q Consensus 200 ~~~~PvVV~iHGGg~~~g~~~-~~~~~~~~La~~G~~Vv~~dyR~~~~~~~-------~~~~~D~~~al~~l~~~~~~~g 271 (403)
..+.|+||++||.+ .+... ....++..|+++||.|+++|||+.+.... .....|+..+++|+++.. +
T Consensus 55 ~~~~p~vll~HG~~--g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~---~ 129 (324)
T PRK10985 55 ARHKPRLVLFHGLE--GSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREF---G 129 (324)
T ss_pred CCCCCEEEEeCCCC--CCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhC---C
Confidence 34579999999942 12222 33457788999999999999999754321 134789888999987742 2
Q ss_pred CCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhh
Q 015669 272 GDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFD 328 (403)
Q Consensus 272 ~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~ 328 (403)
..+++++|||+||.+++..+.... ....+++++.+++.+++..
T Consensus 130 --~~~~~~vG~S~GG~i~~~~~~~~~------------~~~~~~~~v~i~~p~~~~~ 172 (324)
T PRK10985 130 --HVPTAAVGYSLGGNMLACLLAKEG------------DDLPLDAAVIVSAPLMLEA 172 (324)
T ss_pred --CCCEEEEEecchHHHHHHHHHhhC------------CCCCccEEEEEcCCCCHHH
Confidence 357999999999998877665431 0124788888888877653
No 30
>PLN00021 chlorophyllase
Probab=99.45 E-value=1.7e-12 Score=127.52 Aligned_cols=123 Identities=24% Similarity=0.300 Sum_probs=92.2
Q ss_pred ceEEEEEeeCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchhhHHHHHHHHHHHHHhh
Q 015669 188 RNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNI 267 (403)
Q Consensus 188 ~~~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~ 267 (403)
...+.+|+|.. .++.|+|||+||+++ +...+..+.+.|+++||+|+++|+++.........+.|..++++|+.+.+
T Consensus 38 ~~p~~v~~P~~-~g~~PvVv~lHG~~~---~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l 113 (313)
T PLN00021 38 PKPLLVATPSE-AGTYPVLLFLHGYLL---YNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGL 113 (313)
T ss_pred CceEEEEeCCC-CCCCCEEEEECCCCC---CcccHHHHHHHHHhCCCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhh
Confidence 46789999975 467899999999654 44566778899999999999999876432233445778888999998765
Q ss_pred hh-----cCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccC
Q 015669 268 SE-----YGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGG 323 (403)
Q Consensus 268 ~~-----~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~ 323 (403)
+. ...|.++++++|||+||.+++.++....... ....+++++.+.+.
T Consensus 114 ~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~---------~~~~v~ali~ldPv 165 (313)
T PLN00021 114 AAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVS---------LPLKFSALIGLDPV 165 (313)
T ss_pred hhhcccccccChhheEEEEECcchHHHHHHHhhccccc---------cccceeeEEeeccc
Confidence 43 2467789999999999999999987653211 12357778877664
No 31
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.45 E-value=1.2e-12 Score=120.50 Aligned_cols=90 Identities=19% Similarity=0.082 Sum_probs=59.6
Q ss_pred CCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchhhHHHHHHHHHHHHHhhhhcCCCCCcEEEE
Q 015669 201 GPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLM 280 (403)
Q Consensus 201 ~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~ 280 (403)
+++|+||++||. .++...+..+...|. .||.|+++|+|+.+.+..+....+.....+.+.+.++..+ .++++++
T Consensus 11 ~~~~~li~~hg~---~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~--~~~v~li 84 (251)
T TIGR02427 11 DGAPVLVFINSL---GTDLRMWDPVLPALT-PDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHLG--IERAVFC 84 (251)
T ss_pred CCCCeEEEEcCc---ccchhhHHHHHHHhh-cccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCceEEE
Confidence 357899999993 334444555666664 6899999999998765433221122223333333333333 3689999
Q ss_pred EcCchHHHHHHHHHHH
Q 015669 281 GQSAGAHIAACTLLEQ 296 (403)
Q Consensus 281 G~S~GG~la~~~a~~~ 296 (403)
|||+||.+++.++...
T Consensus 85 G~S~Gg~~a~~~a~~~ 100 (251)
T TIGR02427 85 GLSLGGLIAQGLAARR 100 (251)
T ss_pred EeCchHHHHHHHHHHC
Confidence 9999999999888765
No 32
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.43 E-value=4.2e-12 Score=123.48 Aligned_cols=111 Identities=13% Similarity=0.088 Sum_probs=74.8
Q ss_pred eeecCCCceEEEEEeeCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchhh--HHHHHH
Q 015669 181 IVYGDQPRNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDM--VKDASQ 258 (403)
Q Consensus 181 i~y~~~~~~~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~~--~~D~~~ 258 (403)
+.....++...++++....+...|+|||+||. .++...+..+...|+++||.|+++|.|+++.+..+.. ..+...
T Consensus 24 ~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~---~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~ 100 (302)
T PRK00870 24 VDVDDGDGGPLRMHYVDEGPADGPPVLLLHGE---PSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYAR 100 (302)
T ss_pred EeecCCCCceEEEEEEecCCCCCCEEEEECCC---CCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHH
Confidence 33333344556677665433346899999994 3455566778888988899999999999887654321 112233
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHH
Q 015669 259 GISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 259 al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
..+++.+.+++.++ ++++++|||+||.++..++...
T Consensus 101 ~a~~l~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~ 136 (302)
T PRK00870 101 HVEWMRSWFEQLDL--TDVTLVCQDWGGLIGLRLAAEH 136 (302)
T ss_pred HHHHHHHHHHHcCC--CCEEEEEEChHHHHHHHHHHhC
Confidence 34444444444444 5899999999999999988765
No 33
>PRK11460 putative hydrolase; Provisional
Probab=99.43 E-value=2.4e-12 Score=121.25 Aligned_cols=140 Identities=16% Similarity=0.109 Sum_probs=88.0
Q ss_pred CCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCC-----C-CCCc------h--hhHHH----HHHHHH
Q 015669 200 DGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNF-----P-QGTI------K--DMVKD----ASQGIS 261 (403)
Q Consensus 200 ~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~-----~-~~~~------~--~~~~D----~~~al~ 261 (403)
..+.|+||++|| ..++...+..++..|++.+..+..+++|+. . ...| . ....+ +.+..+
T Consensus 13 ~~~~~~vIlLHG---~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~ 89 (232)
T PRK11460 13 KPAQQLLLLFHG---VGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIE 89 (232)
T ss_pred CCCCcEEEEEeC---CCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHH
Confidence 456789999999 455666777888888876644444444431 1 1111 0 11112 222334
Q ss_pred HHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhhhhhhhhhhHH
Q 015669 262 FVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDHFHSRGLYRS 341 (403)
Q Consensus 262 ~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~~~~~~~~~~~ 341 (403)
++.....+.++++++|+|+|+|+||.+++.++... +..+..++.++|.+...
T Consensus 90 ~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~--------------~~~~~~vv~~sg~~~~~-------------- 141 (232)
T PRK11460 90 TVRYWQQQSGVGASATALIGFSQGAIMALEAVKAE--------------PGLAGRVIAFSGRYASL-------------- 141 (232)
T ss_pred HHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhC--------------CCcceEEEEeccccccc--------------
Confidence 44444556688889999999999999999877643 22345566666632100
Q ss_pred HHhhhhcCchhhhcCCccccccCCCcccccCCCCcEEEEEeCCCCCCCHHHHHHH
Q 015669 342 IFLSIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADARILQ 396 (403)
Q Consensus 342 ~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~~~S~~l 396 (403)
+.. ....+|++++||++|++||++.++++
T Consensus 142 ----------------~~~----------~~~~~pvli~hG~~D~vvp~~~~~~~ 170 (232)
T PRK11460 142 ----------------PET----------APTATTIHLIHGGEDPVIDVAHAVAA 170 (232)
T ss_pred ----------------ccc----------ccCCCcEEEEecCCCCccCHHHHHHH
Confidence 000 00136999999999999999999873
No 34
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.41 E-value=4.1e-12 Score=121.91 Aligned_cols=91 Identities=11% Similarity=0.001 Sum_probs=61.1
Q ss_pred CCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchhhHHHHHHHHHHHHHhhhhcCCCCCcEEEEE
Q 015669 202 PKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMG 281 (403)
Q Consensus 202 ~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G 281 (403)
..+.|||+|| ..++...+..+...|. ++|.|+++|+||++.+..+....+.....+++.+.++..+ .+++.|+|
T Consensus 24 ~~~plvllHG---~~~~~~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l~--~~~~~LvG 97 (276)
T TIGR02240 24 GLTPLLIFNG---IGANLELVFPFIEALD-PDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYLD--YGQVNAIG 97 (276)
T ss_pred CCCcEEEEeC---CCcchHHHHHHHHHhc-cCceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhC--cCceEEEE
Confidence 3468999999 3444455566667775 4799999999998877543221122222333333343333 35899999
Q ss_pred cCchHHHHHHHHHHHHH
Q 015669 282 QSAGAHIAACTLLEQAI 298 (403)
Q Consensus 282 ~S~GG~la~~~a~~~~~ 298 (403)
||+||.+++.++...+.
T Consensus 98 ~S~GG~va~~~a~~~p~ 114 (276)
T TIGR02240 98 VSWGGALAQQFAHDYPE 114 (276)
T ss_pred ECHHHHHHHHHHHHCHH
Confidence 99999999999987643
No 35
>PLN02511 hydrolase
Probab=99.41 E-value=8.4e-12 Score=126.31 Aligned_cols=121 Identities=17% Similarity=0.203 Sum_probs=82.1
Q ss_pred CceEEEEEeeCC--CCCCCcEEEEEcCCcccCCccc-cchHHHHHHHhCCCeEEEecccCCCCCCc-------hhhHHHH
Q 015669 187 PRNRLDLYFPKS--SDGPKPVVAFITGGAWIIGYKA-WGSLLGQQLSERDIIVACIDYRNFPQGTI-------KDMVKDA 256 (403)
Q Consensus 187 ~~~~l~vy~P~~--~~~~~PvVV~iHGGg~~~g~~~-~~~~~~~~La~~G~~Vv~~dyR~~~~~~~-------~~~~~D~ 256 (403)
+.+.++++.+.. .....|+||++||.+ .++.. +...+...+.++||.|+++|+|+++.... ....+|+
T Consensus 82 ~~~~ldw~~~~~~~~~~~~p~vvllHG~~--g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl 159 (388)
T PLN02511 82 GAVALDWVSGDDRALPADAPVLILLPGLT--GGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASFTGDL 159 (388)
T ss_pred CEEEEEecCcccccCCCCCCEEEEECCCC--CCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCchHHH
Confidence 334556554322 234578999999932 23322 33445666778899999999999876542 2447898
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCCh
Q 015669 257 SQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNL 326 (403)
Q Consensus 257 ~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~ 326 (403)
.++++++.... ...+++++|+|+||.+++..+.+.+. ...+.+.+.++...++
T Consensus 160 ~~~i~~l~~~~-----~~~~~~lvG~SlGg~i~~~yl~~~~~------------~~~v~~~v~is~p~~l 212 (388)
T PLN02511 160 RQVVDHVAGRY-----PSANLYAAGWSLGANILVNYLGEEGE------------NCPLSGAVSLCNPFDL 212 (388)
T ss_pred HHHHHHHHHHC-----CCCCEEEEEechhHHHHHHHHHhcCC------------CCCceEEEEECCCcCH
Confidence 88999887632 23589999999999999988876521 0136777777766664
No 36
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.41 E-value=2.6e-12 Score=119.71 Aligned_cols=119 Identities=27% Similarity=0.310 Sum_probs=74.0
Q ss_pred EEEEEeeCCCC-CCCcEEEEEcCCcccCCccccchHHHHHHHhC-CCeEEEecccC--CCCCCch-------hhHHHHHH
Q 015669 190 RLDLYFPKSSD-GPKPVVAFITGGAWIIGYKAWGSLLGQQLSER-DIIVACIDYRN--FPQGTIK-------DMVKDASQ 258 (403)
Q Consensus 190 ~l~vy~P~~~~-~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~-G~~Vv~~dyR~--~~~~~~~-------~~~~D~~~ 258 (403)
...+|+|+... ++.|+||++||.+.....-.....+ ..+|++ ||+|+.|+--. ....+|. ....|...
T Consensus 2 ~Y~lYvP~~~~~~~~PLVv~LHG~~~~a~~~~~~s~~-~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~ 80 (220)
T PF10503_consen 2 SYRLYVPPGAPRGPVPLVVVLHGCGQSAEDFAAGSGW-NALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAF 80 (220)
T ss_pred cEEEecCCCCCCCCCCEEEEeCCCCCCHHHHHhhcCH-HHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhh
Confidence 46899998643 4789999999965422111111112 457766 99999998422 1222221 11123322
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccC
Q 015669 259 GISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGG 323 (403)
Q Consensus 259 al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~ 323 (403)
...-+.+...++++|++||++.|+|+||.++..++... ++.|.++...+|.
T Consensus 81 i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~--------------pd~faa~a~~sG~ 131 (220)
T PF10503_consen 81 IAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAY--------------PDLFAAVAVVSGV 131 (220)
T ss_pred HHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhC--------------CccceEEEeeccc
Confidence 22223333446789999999999999999999888765 4566666656553
No 37
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.40 E-value=2.4e-12 Score=139.74 Aligned_cols=183 Identities=17% Similarity=0.157 Sum_probs=120.6
Q ss_pred eEEEEEeeCC--CCCCCcEEEEEcCCcccCC-ccccchHHHHHHH-hCCCeEEEecccCCCCCCch-----------hhH
Q 015669 189 NRLDLYFPKS--SDGPKPVVAFITGGAWIIG-YKAWGSLLGQQLS-ERDIIVACIDYRNFPQGTIK-----------DMV 253 (403)
Q Consensus 189 ~~l~vy~P~~--~~~~~PvVV~iHGGg~~~g-~~~~~~~~~~~La-~~G~~Vv~~dyR~~~~~~~~-----------~~~ 253 (403)
..+.+.+|++ ..++.|+||.+|||-.... .......+...++ ..|++|+.+|+||.++.... ..+
T Consensus 510 ~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev 589 (755)
T KOG2100|consen 510 ANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEV 589 (755)
T ss_pred EEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcch
Confidence 3456677865 4568999999999864111 1122334444544 45999999999997654332 247
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhhhh
Q 015669 254 KDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDHF 333 (403)
Q Consensus 254 ~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~~~ 333 (403)
.|+..+++++.++. .+|++||+|+|+|.||++++.++... ....+|+.++++|++|+. +.+..
T Consensus 590 ~D~~~~~~~~~~~~---~iD~~ri~i~GwSyGGy~t~~~l~~~-------------~~~~fkcgvavaPVtd~~-~yds~ 652 (755)
T KOG2100|consen 590 KDQIEAVKKVLKLP---FIDRSRVAIWGWSYGGYLTLKLLESD-------------PGDVFKCGVAVAPVTDWL-YYDST 652 (755)
T ss_pred HHHHHHHHHHHhcc---cccHHHeEEeccChHHHHHHHHhhhC-------------cCceEEEEEEecceeeee-eeccc
Confidence 89999999888765 59999999999999999999888664 124678889999999998 54433
Q ss_pred hhhhhhHHHHhhhhcCchhhhcCCccccccCCCcccccCCCCc-EEEEEeCCCCCCCHHHHHHHHHHHhc
Q 015669 334 HSRGLYRSIFLSIMDGEESLRQYSPEVLVQDPNTRHAVSLLPP-IILFHGTADYSIPADARILQILFKEL 402 (403)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~pP-vLIiHG~~D~vVP~~~S~~l~lf~~l 402 (403)
..... ++............++. ..+....-| .|++||+.|+.|+++++.+ ++++|
T Consensus 653 ~tery----mg~p~~~~~~y~e~~~~--------~~~~~~~~~~~LliHGt~DdnVh~q~s~~--~~~aL 708 (755)
T KOG2100|consen 653 YTERY----MGLPSENDKGYEESSVS--------SPANNIKTPKLLLIHGTEDDNVHFQQSAI--LIKAL 708 (755)
T ss_pred ccHhh----cCCCccccchhhhcccc--------chhhhhccCCEEEEEcCCcCCcCHHHHHH--HHHHH
Confidence 22111 11111111111122221 222222234 6999999999999999997 66655
No 38
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.38 E-value=1.5e-11 Score=116.62 Aligned_cols=97 Identities=16% Similarity=0.096 Sum_probs=64.8
Q ss_pred EEEEeeCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchh----hHHHHHHHHHHHHHh
Q 015669 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKD----MVKDASQGISFVCNN 266 (403)
Q Consensus 191 l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~----~~~D~~~al~~l~~~ 266 (403)
+++++.+....+.|+||++||. .++...+..+...|++ +|.|+++|+|+.+....+. .+.+..+.+..+
T Consensus 16 ~~~~~~~~g~~~~~~vv~~hG~---~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~--- 88 (278)
T TIGR03056 16 FHWHVQDMGPTAGPLLLLLHGT---GASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSAL--- 88 (278)
T ss_pred EEEEEEecCCCCCCeEEEEcCC---CCCHHHHHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHH---
Confidence 5555555444456899999993 3455555666777754 6999999999987654322 233433333333
Q ss_pred hhhcCCCCCcEEEEEcCchHHHHHHHHHHH
Q 015669 267 ISEYGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 267 ~~~~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
+...++ ++++|+|||+||.+++.++...
T Consensus 89 i~~~~~--~~~~lvG~S~Gg~~a~~~a~~~ 116 (278)
T TIGR03056 89 CAAEGL--SPDGVIGHSAGAAIALRLALDG 116 (278)
T ss_pred HHHcCC--CCceEEEECccHHHHHHHHHhC
Confidence 333333 5789999999999999888654
No 39
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.38 E-value=3.9e-12 Score=115.42 Aligned_cols=186 Identities=14% Similarity=0.198 Sum_probs=119.6
Q ss_pred eceeecCCCceEEEEEeeCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhC-CCeEEEecccCCCCCCch----hhH
Q 015669 179 RGIVYGDQPRNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSER-DIIVACIDYRNFPQGTIK----DMV 253 (403)
Q Consensus 179 ~~i~y~~~~~~~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~-G~~Vv~~dyR~~~~~~~~----~~~ 253 (403)
+.+.....|...++-|.-.. +...|+++++|+. .|+.......++-+-.+ +..|+.++|||++.+... ...
T Consensus 55 e~i~l~T~D~vtL~a~~~~~-E~S~pTlLyfh~N---AGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL~ 130 (300)
T KOG4391|consen 55 ERIELRTRDKVTLDAYLMLS-ESSRPTLLYFHAN---AGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGLK 130 (300)
T ss_pred eEEEEEcCcceeEeeeeecc-cCCCceEEEEccC---CCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCcccccee
Confidence 45555677778888887764 4478999999994 45555555566555544 999999999998877653 236
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhh-hhh
Q 015669 254 KDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDL-VDH 332 (403)
Q Consensus 254 ~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~-~~~ 332 (403)
.|.+++++|+-++. ..|..+++++|.|.||.+|..++.... ..+.+++....+..+..+ ...
T Consensus 131 lDs~avldyl~t~~---~~dktkivlfGrSlGGAvai~lask~~--------------~ri~~~ivENTF~SIp~~~i~~ 193 (300)
T KOG4391|consen 131 LDSEAVLDYLMTRP---DLDKTKIVLFGRSLGGAVAIHLASKNS--------------DRISAIIVENTFLSIPHMAIPL 193 (300)
T ss_pred ccHHHHHHHHhcCc---cCCcceEEEEecccCCeeEEEeeccch--------------hheeeeeeechhccchhhhhhe
Confidence 79999999998764 367889999999999999998876542 234455544444444221 111
Q ss_pred hhhhhhhHHHHhhhhcCchhhhcCCccccccCCCcccccCCCCcEEEEEeCCCCCCCHHHHHHHHHHHh
Q 015669 333 FHSRGLYRSIFLSIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADARILQILFKE 401 (403)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~~~S~~l~lf~~ 401 (403)
..... . ..+....... .+.. ...+..-..|+|++.|.+|.+||+-+-++ ||+.
T Consensus 194 v~p~~-~-k~i~~lc~kn----~~~S--------~~ki~~~~~P~LFiSGlkDelVPP~~Mr~--Ly~~ 246 (300)
T KOG4391|consen 194 VFPFP-M-KYIPLLCYKN----KWLS--------YRKIGQCRMPFLFISGLKDELVPPVMMRQ--LYEL 246 (300)
T ss_pred eccch-h-hHHHHHHHHh----hhcc--------hhhhccccCceEEeecCccccCCcHHHHH--HHHh
Confidence 11100 0 0000000000 0000 01111223699999999999999999997 7763
No 40
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.38 E-value=1.3e-11 Score=117.99 Aligned_cols=101 Identities=16% Similarity=0.075 Sum_probs=62.3
Q ss_pred EEEEeeCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchh--hHHHHHHHHHHHHHhhh
Q 015669 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKD--MVKDASQGISFVCNNIS 268 (403)
Q Consensus 191 l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~--~~~D~~~al~~l~~~~~ 268 (403)
.++++.... ..|.||++||.+...............+++.||.|+++|+||++.+.... ...+. ...+.+.+.++
T Consensus 20 ~~~~y~~~g--~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~-~~~~~l~~~l~ 96 (282)
T TIGR03343 20 FRIHYNEAG--NGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGL-VNARAVKGLMD 96 (282)
T ss_pred eeEEEEecC--CCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccc-hhHHHHHHHHH
Confidence 456655433 44789999994422111111122345666779999999999988775431 11110 11233344444
Q ss_pred hcCCCCCcEEEEEcCchHHHHHHHHHHH
Q 015669 269 EYGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 269 ~~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
.. +.++++++|||+||.+++.++...
T Consensus 97 ~l--~~~~~~lvG~S~Gg~ia~~~a~~~ 122 (282)
T TIGR03343 97 AL--DIEKAHLVGNSMGGATALNFALEY 122 (282)
T ss_pred Hc--CCCCeeEEEECchHHHHHHHHHhC
Confidence 33 346999999999999999998765
No 41
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.37 E-value=5.5e-12 Score=113.93 Aligned_cols=99 Identities=20% Similarity=0.213 Sum_probs=69.6
Q ss_pred EEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchh-----hHHHHHHHHHHHHHhhhhcCCCCCcEEEE
Q 015669 206 VAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKD-----MVKDASQGISFVCNNISEYGGDPDRIYLM 280 (403)
Q Consensus 206 VV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~-----~~~D~~~al~~l~~~~~~~g~d~~rI~l~ 280 (403)
|||+||. .++...+..+...|+ +||.|+++|+|+.+....+. ...|.... +.+.+++.+. +++.++
T Consensus 1 vv~~hG~---~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~---l~~~l~~~~~--~~~~lv 71 (228)
T PF12697_consen 1 VVFLHGF---GGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAED---LAELLDALGI--KKVILV 71 (228)
T ss_dssp EEEE-ST---TTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHH---HHHHHHHTTT--SSEEEE
T ss_pred eEEECCC---CCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhh---hhhccccccc--cccccc
Confidence 7999994 445567777888884 79999999999987765432 22333222 2222333333 689999
Q ss_pred EcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChh
Q 015669 281 GQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLF 327 (403)
Q Consensus 281 G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~ 327 (403)
|||+||.+++.++... +..+++++.+++.....
T Consensus 72 G~S~Gg~~a~~~a~~~--------------p~~v~~~vl~~~~~~~~ 104 (228)
T PF12697_consen 72 GHSMGGMIALRLAARY--------------PDRVKGLVLLSPPPPLP 104 (228)
T ss_dssp EETHHHHHHHHHHHHS--------------GGGEEEEEEESESSSHH
T ss_pred cccccccccccccccc--------------ccccccceeeccccccc
Confidence 9999999999988664 45789999988877543
No 42
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.37 E-value=7.2e-12 Score=122.36 Aligned_cols=119 Identities=22% Similarity=0.210 Sum_probs=80.9
Q ss_pred eEEEEEeeCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCC-ch----hhHHHHHHHHHHH
Q 015669 189 NRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGT-IK----DMVKDASQGISFV 263 (403)
Q Consensus 189 ~~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~-~~----~~~~D~~~al~~l 263 (403)
+.+..|.+.. .+..+||++||.+. +...+..++..|+++||.|+++|.||.+.+. .. ....|....++.+
T Consensus 22 ~~~~~~~~~~--~~~g~Vvl~HG~~E---h~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~ 96 (298)
T COG2267 22 LRYRTWAAPE--PPKGVVVLVHGLGE---HSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAF 96 (298)
T ss_pred EEEEeecCCC--CCCcEEEEecCchH---HHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHH
Confidence 4566666643 23379999999544 4456777899999999999999999987765 21 1233333333333
Q ss_pred HHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChh
Q 015669 264 CNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLF 327 (403)
Q Consensus 264 ~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~ 327 (403)
.+.+..- ....+++|+||||||.+++..+.... ..+.+++..++.+.+.
T Consensus 97 ~~~~~~~-~~~~p~~l~gHSmGg~Ia~~~~~~~~--------------~~i~~~vLssP~~~l~ 145 (298)
T COG2267 97 VETIAEP-DPGLPVFLLGHSMGGLIALLYLARYP--------------PRIDGLVLSSPALGLG 145 (298)
T ss_pred HHHHhcc-CCCCCeEEEEeCcHHHHHHHHHHhCC--------------ccccEEEEECccccCC
Confidence 3333221 12369999999999999999887752 4667777777766655
No 43
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.37 E-value=1.2e-11 Score=114.90 Aligned_cols=90 Identities=17% Similarity=0.121 Sum_probs=58.4
Q ss_pred CCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchh-hHHHHHHHHHHHHHhhhhcCCCCCcEEE
Q 015669 201 GPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKD-MVKDASQGISFVCNNISEYGGDPDRIYL 279 (403)
Q Consensus 201 ~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~-~~~D~~~al~~l~~~~~~~g~d~~rI~l 279 (403)
.+.|+||++||.+ ++...+......|. ++|.|+++|+||.+.+..+. ...+.....+.+.+.++..+ .+++++
T Consensus 11 ~~~~~iv~lhG~~---~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~l 84 (257)
T TIGR03611 11 ADAPVVVLSSGLG---GSGSYWAPQLDVLT-QRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALN--IERFHF 84 (257)
T ss_pred CCCCEEEEEcCCC---cchhHHHHHHHHHH-hccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhC--CCcEEE
Confidence 4578999999943 44445555555554 57999999999987654321 11122222333333333333 468999
Q ss_pred EEcCchHHHHHHHHHHH
Q 015669 280 MGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 280 ~G~S~GG~la~~~a~~~ 296 (403)
+|+|+||.+++.++...
T Consensus 85 ~G~S~Gg~~a~~~a~~~ 101 (257)
T TIGR03611 85 VGHALGGLIGLQLALRY 101 (257)
T ss_pred EEechhHHHHHHHHHHC
Confidence 99999999999888754
No 44
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.35 E-value=3.2e-12 Score=120.79 Aligned_cols=157 Identities=24% Similarity=0.313 Sum_probs=97.4
Q ss_pred ceEEEEEeeCC--CCCCC-cEEEEEcCCcccCCccccchH--HH--HHHH-hCCCeEEEecccC-CCC--CCchhhHHHH
Q 015669 188 RNRLDLYFPKS--SDGPK-PVVAFITGGAWIIGYKAWGSL--LG--QQLS-ERDIIVACIDYRN-FPQ--GTIKDMVKDA 256 (403)
Q Consensus 188 ~~~l~vy~P~~--~~~~~-PvVV~iHGGg~~~g~~~~~~~--~~--~~La-~~G~~Vv~~dyR~-~~~--~~~~~~~~D~ 256 (403)
.+..++|.|++ .++++ |.|||+||+|..+........ .+ .+.. +.++-|++|.|-- +.. ..-...+..
T Consensus 173 eLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t~~~l~~- 251 (387)
T COG4099 173 ELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKTLLYLIE- 251 (387)
T ss_pred eeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEcccccccccccccccchhHHH-
Confidence 36889999976 45566 999999998854322211100 00 0111 1245555665432 100 000112222
Q ss_pred HHHHHHHH-HhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhhhhhh
Q 015669 257 SQGISFVC-NNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDHFHS 335 (403)
Q Consensus 257 ~~al~~l~-~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~~~~~ 335 (403)
.++.+. ...+.+++|.+||+++|.|+||..++.++... +..+.+.+.++|.-|-....+..
T Consensus 252 --~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kf--------------PdfFAaa~~iaG~~d~v~lv~~l-- 313 (387)
T COG4099 252 --KIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKF--------------PDFFAAAVPIAGGGDRVYLVRTL-- 313 (387)
T ss_pred --HHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhC--------------chhhheeeeecCCCchhhhhhhh--
Confidence 333333 23456899999999999999999999888765 56788889999865521111100
Q ss_pred hhhhHHHHhhhhcCchhhhcCCccccccCCCcccccCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhc
Q 015669 336 RGLYRSIFLSIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADARILQILFKEL 402 (403)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~~~S~~l~lf~~l 402 (403)
+ ..|++++|+.+|+++|.+.|+- +|+++
T Consensus 314 ---------------------------k----------~~piWvfhs~dDkv~Pv~nSrv--~y~~l 341 (387)
T COG4099 314 ---------------------------K----------KAPIWVFHSSDDKVIPVSNSRV--LYERL 341 (387)
T ss_pred ---------------------------c----------cCceEEEEecCCCccccCccee--ehHHH
Confidence 0 1499999999999999999997 66654
No 45
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.34 E-value=2.6e-11 Score=117.28 Aligned_cols=88 Identities=14% Similarity=0.095 Sum_probs=61.1
Q ss_pred CcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchh-------hHHHHHHHHHHHHHhhhhcCCCCC
Q 015669 203 KPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKD-------MVKDASQGISFVCNNISEYGGDPD 275 (403)
Q Consensus 203 ~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~-------~~~D~~~al~~l~~~~~~~g~d~~ 275 (403)
.|+|||+||. .++...+..+...|++. +.|+++|+||++.+..+. ...+..+..+.+.+.+++.++ +
T Consensus 29 ~~~vlllHG~---~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~--~ 102 (294)
T PLN02824 29 GPALVLVHGF---GGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVG--D 102 (294)
T ss_pred CCeEEEECCC---CCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhcC--C
Confidence 4799999993 34555666777888765 799999999988765432 112222233333333434444 6
Q ss_pred cEEEEEcCchHHHHHHHHHHH
Q 015669 276 RIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 276 rI~l~G~S~GG~la~~~a~~~ 296 (403)
++.++|||+||.+++.++...
T Consensus 103 ~~~lvGhS~Gg~va~~~a~~~ 123 (294)
T PLN02824 103 PAFVICNSVGGVVGLQAAVDA 123 (294)
T ss_pred CeEEEEeCHHHHHHHHHHHhC
Confidence 899999999999999998875
No 46
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.33 E-value=3.4e-11 Score=115.58 Aligned_cols=124 Identities=16% Similarity=0.136 Sum_probs=88.2
Q ss_pred eEEEEEeeCCCCCCCcEEEEEcCCcccCC-ccccchHHHHHHHhCCCeEEEecccCCCCCC-------chhhHHHHHHHH
Q 015669 189 NRLDLYFPKSSDGPKPVVAFITGGAWIIG-YKAWGSLLGQQLSERDIIVACIDYRNFPQGT-------IKDMVKDASQGI 260 (403)
Q Consensus 189 ~~l~vy~P~~~~~~~PvVV~iHGGg~~~g-~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~-------~~~~~~D~~~al 260 (403)
....+|.+....+++|+||++||.+...+ +...+..+++.|+++||.|+.+|||+++.+. +....+|+..++
T Consensus 11 ~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai 90 (266)
T TIGR03101 11 FRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAY 90 (266)
T ss_pred cEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHH
Confidence 34455554444456799999999543222 2233455678999999999999999976542 234578888888
Q ss_pred HHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhhh
Q 015669 261 SFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDH 332 (403)
Q Consensus 261 ~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~~ 332 (403)
+|+++. + .++|+|+|+|+||.+++.++... +..++++|.+++..+.......
T Consensus 91 ~~L~~~----~--~~~v~LvG~SmGG~vAl~~A~~~--------------p~~v~~lVL~~P~~~g~~~l~~ 142 (266)
T TIGR03101 91 RWLIEQ----G--HPPVTLWGLRLGALLALDAANPL--------------AAKCNRLVLWQPVVSGKQQLQQ 142 (266)
T ss_pred HHHHhc----C--CCCEEEEEECHHHHHHHHHHHhC--------------ccccceEEEeccccchHHHHHH
Confidence 888753 2 36899999999999999887653 3467788888887776655444
No 47
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.32 E-value=4.3e-11 Score=112.52 Aligned_cols=91 Identities=12% Similarity=0.125 Sum_probs=60.5
Q ss_pred CCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchhhHHHHHHHHHHHHHhhhhcCCCCCcEE
Q 015669 199 SDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIY 278 (403)
Q Consensus 199 ~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~ 278 (403)
.+..+|+|||+||. .++...+..+...|+ ++|.|+.+|+|+.+.+..+.. .+.....+++.+.+..++. ++++
T Consensus 12 ~~~~~~~iv~lhG~---~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~s~~~~~-~~~~~~~~d~~~~l~~l~~--~~~~ 84 (255)
T PRK10673 12 NPHNNSPIVLVHGL---FGSLDNLGVLARDLV-NDHDIIQVDMRNHGLSPRDPV-MNYPAMAQDLLDTLDALQI--EKAT 84 (255)
T ss_pred CCCCCCCEEEECCC---CCchhHHHHHHHHHh-hCCeEEEECCCCCCCCCCCCC-CCHHHHHHHHHHHHHHcCC--CceE
Confidence 34567899999993 445555566667775 479999999999776543221 1222223333333333343 5799
Q ss_pred EEEcCchHHHHHHHHHHH
Q 015669 279 LMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 279 l~G~S~GG~la~~~a~~~ 296 (403)
|+|||+||.+++.++...
T Consensus 85 lvGhS~Gg~va~~~a~~~ 102 (255)
T PRK10673 85 FIGHSMGGKAVMALTALA 102 (255)
T ss_pred EEEECHHHHHHHHHHHhC
Confidence 999999999999988764
No 48
>PRK11071 esterase YqiA; Provisional
Probab=99.31 E-value=2.1e-11 Score=111.37 Aligned_cols=155 Identities=15% Similarity=0.180 Sum_probs=85.2
Q ss_pred cEEEEEcCCcccCCccccch--HHHHHHHhC--CCeEEEecccCCCCCCchhhHHHHHHHHHHHHHhhhhcCCCCCcEEE
Q 015669 204 PVVAFITGGAWIIGYKAWGS--LLGQQLSER--DIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYL 279 (403)
Q Consensus 204 PvVV~iHGGg~~~g~~~~~~--~~~~~La~~--G~~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l 279 (403)
|.|||+|| ..++...+. .+...+++. +|.|+++|.++.+ .+..+.+..+ +++++. +++++
T Consensus 2 p~illlHG---f~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~--------~~~~~~l~~l---~~~~~~--~~~~l 65 (190)
T PRK11071 2 STLLYLHG---FNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP--------ADAAELLESL---VLEHGG--DPLGL 65 (190)
T ss_pred CeEEEECC---CCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH--------HHHHHHHHHH---HHHcCC--CCeEE
Confidence 68999999 333333322 344566553 8999999999753 2333333333 333343 58999
Q ss_pred EEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhhhhhhhhhhHHHHh-hhhcCchhhhcCCc
Q 015669 280 MGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDHFHSRGLYRSIFL-SIMDGEESLRQYSP 358 (403)
Q Consensus 280 ~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~sp 358 (403)
+|+|+||.+++.++...+ . ..+.+++..+..+....+..... ..... ......+.+...
T Consensus 66 vG~S~Gg~~a~~~a~~~~----------------~-~~vl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~-- 125 (190)
T PRK11071 66 VGSSLGGYYATWLSQCFM----------------L-PAVVVNPAVRPFELLTDYLGENE-NPYTGQQYVLESRHIYDL-- 125 (190)
T ss_pred EEECHHHHHHHHHHHHcC----------------C-CEEEECCCCCHHHHHHHhcCCcc-cccCCCcEEEcHHHHHHH--
Confidence 999999999999887641 1 24566666653322221110000 00000 000000000000
Q ss_pred cccccCCCcccccCCCCcEEEEEeCCCCCCCHHHHHHHHHHHh
Q 015669 359 EVLVQDPNTRHAVSLLPPIILFHGTADYSIPADARILQILFKE 401 (403)
Q Consensus 359 ~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~~~S~~l~lf~~ 401 (403)
....+.. .....|++|+||++|++||++.+.+ +|++
T Consensus 126 ----~~~~~~~-i~~~~~v~iihg~~De~V~~~~a~~--~~~~ 161 (190)
T PRK11071 126 ----KVMQIDP-LESPDLIWLLQQTGDEVLDYRQAVA--YYAA 161 (190)
T ss_pred ----HhcCCcc-CCChhhEEEEEeCCCCcCCHHHHHH--HHHh
Confidence 0001111 1233589999999999999999998 6654
No 49
>PLN02965 Probable pheophorbidase
Probab=99.31 E-value=5.3e-11 Score=112.91 Aligned_cols=88 Identities=17% Similarity=0.162 Sum_probs=62.0
Q ss_pred EEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchhh-HHHHHHHHHHHHHhhhhcCCCCCcEEEEEcC
Q 015669 205 VVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDM-VKDASQGISFVCNNISEYGGDPDRIYLMGQS 283 (403)
Q Consensus 205 vVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~~-~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S 283 (403)
.|||+||.+ .+...+......|++.||.|+++|+||++.+..+.. ..+..+..+++.+.+++.+.. ++++++|||
T Consensus 5 ~vvllHG~~---~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~-~~~~lvGhS 80 (255)
T PLN02965 5 HFVFVHGAS---HGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPD-HKVILVGHS 80 (255)
T ss_pred EEEEECCCC---CCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCC-CCEEEEecC
Confidence 599999943 344456677788888899999999999887653321 122333444555555544432 599999999
Q ss_pred chHHHHHHHHHHH
Q 015669 284 AGAHIAACTLLEQ 296 (403)
Q Consensus 284 ~GG~la~~~a~~~ 296 (403)
|||.+++.++...
T Consensus 81 mGG~ia~~~a~~~ 93 (255)
T PLN02965 81 IGGGSVTEALCKF 93 (255)
T ss_pred cchHHHHHHHHhC
Confidence 9999999998765
No 50
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.29 E-value=3.2e-11 Score=120.12 Aligned_cols=90 Identities=17% Similarity=0.066 Sum_probs=60.3
Q ss_pred CCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchhhHHHHHHHHHHHHHhhhhcCCCCCcEEEE
Q 015669 201 GPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLM 280 (403)
Q Consensus 201 ~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~ 280 (403)
++.|+||++||. .++...+..+...|.+ +|.|+++|+|+++.........+.....+++.+.+..+ ++++++++
T Consensus 129 ~~~~~vl~~HG~---~~~~~~~~~~~~~l~~-~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~lv 202 (371)
T PRK14875 129 GDGTPVVLIHGF---GGDLNNWLFNHAALAA-GRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDAL--GIERAHLV 202 (371)
T ss_pred CCCCeEEEECCC---CCccchHHHHHHHHhc-CCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc--CCccEEEE
Confidence 456899999993 3455556666677754 59999999999876532211122233334444444433 44689999
Q ss_pred EcCchHHHHHHHHHHH
Q 015669 281 GQSAGAHIAACTLLEQ 296 (403)
Q Consensus 281 G~S~GG~la~~~a~~~ 296 (403)
|||+||.+++.++...
T Consensus 203 G~S~Gg~~a~~~a~~~ 218 (371)
T PRK14875 203 GHSMGGAVALRLAARA 218 (371)
T ss_pred eechHHHHHHHHHHhC
Confidence 9999999999887654
No 51
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.29 E-value=9e-11 Score=113.57 Aligned_cols=109 Identities=10% Similarity=0.088 Sum_probs=72.4
Q ss_pred EEEeeCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchhhHHHHHHHHHHHHHhhhhcC
Q 015669 192 DLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYG 271 (403)
Q Consensus 192 ~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~~~~g 271 (403)
++++.... ..|.||++||. .++...+..+...|++.+ .|+++|.||++.+..+..-.+.....+.+.+.++..+
T Consensus 18 ~i~y~~~G--~g~~vvllHG~---~~~~~~w~~~~~~L~~~~-~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l~ 91 (295)
T PRK03592 18 RMAYIETG--EGDPIVFLHGN---PTSSYLWRNIIPHLAGLG-RCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDALG 91 (295)
T ss_pred EEEEEEeC--CCCEEEEECCC---CCCHHHHHHHHHHHhhCC-EEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 34444332 34799999993 355556667788887775 9999999998877554321122233333333344444
Q ss_pred CCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeecc
Q 015669 272 GDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSG 322 (403)
Q Consensus 272 ~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg 322 (403)
+ ++++++|||+||.+++.++...+ ..+++++.+++
T Consensus 92 ~--~~~~lvGhS~Gg~ia~~~a~~~p--------------~~v~~lil~~~ 126 (295)
T PRK03592 92 L--DDVVLVGHDWGSALGFDWAARHP--------------DRVRGIAFMEA 126 (295)
T ss_pred C--CCeEEEEECHHHHHHHHHHHhCh--------------hheeEEEEECC
Confidence 4 58999999999999999988753 45666666554
No 52
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.28 E-value=4.3e-11 Score=117.88 Aligned_cols=192 Identities=18% Similarity=0.174 Sum_probs=112.0
Q ss_pred eceeecCCCc--eEEEEEeeCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCC--------
Q 015669 179 RGIVYGDQPR--NRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGT-------- 248 (403)
Q Consensus 179 ~~i~y~~~~~--~~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~-------- 248 (403)
.++.|.+.++ +...++.|++..++.|+||.+||.|.. ..... ....++..||+|+.+|.||.+...
T Consensus 57 y~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~---~~~~~-~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~ 132 (320)
T PF05448_consen 57 YDVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGR---SGDPF-DLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSG 132 (320)
T ss_dssp EEEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT-----GGGHH-HHHHHHHTT-EEEEE--TTTSSSS-B-SSBSS
T ss_pred EEEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCC---CCCcc-cccccccCCeEEEEecCCCCCCCCCCccccCC
Confidence 4666665544 466788898667899999999995432 22221 223478899999999999844100
Q ss_pred ----------ch---------hhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcc
Q 015669 249 ----------IK---------DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTW 309 (403)
Q Consensus 249 ----------~~---------~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~ 309 (403)
+. .++.|+..+++++.... .+|++||++.|.|.||.+++.++.-.
T Consensus 133 ~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slp---evD~~rI~v~G~SqGG~lal~~aaLd------------- 196 (320)
T PF05448_consen 133 GTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLP---EVDGKRIGVTGGSQGGGLALAAAALD------------- 196 (320)
T ss_dssp S-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTST---TEEEEEEEEEEETHHHHHHHHHHHHS-------------
T ss_pred CCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCC---CcCcceEEEEeecCchHHHHHHHHhC-------------
Confidence 00 23689999999998754 47889999999999999999887643
Q ss_pred cccccceeeeeccC-CChhhhhhhhhhhhhh---HHHHh---hhhcC-c---hhhhcCCccccccCCCcccccCCCCcEE
Q 015669 310 SVSQIRAYFGLSGG-YNLFDLVDHFHSRGLY---RSIFL---SIMDG-E---ESLRQYSPEVLVQDPNTRHAVSLLPPII 378 (403)
Q Consensus 310 ~~~~ik~~v~isg~-~d~~~~~~~~~~~~~~---~~~~~---~~~~~-~---~~~~~~sp~~~~~~~~~~~~~~~~pPvL 378 (403)
++|++.+...++ .|+............+ ...+. ..-.. . +.+..++. .+-+..+.+|++
T Consensus 197 --~rv~~~~~~vP~l~d~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~--------~nfA~ri~~pvl 266 (320)
T PF05448_consen 197 --PRVKAAAADVPFLCDFRRALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDA--------VNFARRIKCPVL 266 (320)
T ss_dssp --ST-SEEEEESESSSSHHHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-H--------HHHGGG--SEEE
T ss_pred --ccccEEEecCCCccchhhhhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhH--------HHHHHHcCCCEE
Confidence 468877776554 4555433322211111 11111 00000 0 11222322 233445668999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHhc
Q 015669 379 LFHGTADYSIPADARILQILFKEL 402 (403)
Q Consensus 379 IiHG~~D~vVP~~~S~~l~lf~~l 402 (403)
+-.|-.|++||++...+ .|.++
T Consensus 267 ~~~gl~D~~cPP~t~fA--~yN~i 288 (320)
T PF05448_consen 267 FSVGLQDPVCPPSTQFA--AYNAI 288 (320)
T ss_dssp EEEETT-SSS-HHHHHH--HHCC-
T ss_pred EEEecCCCCCCchhHHH--HHhcc
Confidence 99999999999998876 77654
No 53
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.28 E-value=8.3e-11 Score=109.21 Aligned_cols=146 Identities=19% Similarity=0.280 Sum_probs=94.1
Q ss_pred EEEEeeCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCC---CCch---------------hh
Q 015669 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQ---GTIK---------------DM 252 (403)
Q Consensus 191 l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~---~~~~---------------~~ 252 (403)
.-+..|++. ++.|+||++|+ ..|-......+++.||++||.|+++|+-.... .... ..
T Consensus 3 ay~~~P~~~-~~~~~Vvv~~d---~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (218)
T PF01738_consen 3 AYVARPEGG-GPRPAVVVIHD---IFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQV 78 (218)
T ss_dssp EEEEEETTS-SSEEEEEEE-B---TTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHH
T ss_pred EEEEeCCCC-CCCCEEEEEcC---CCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHH
Confidence 346678765 78999999999 45555666778999999999999999754332 1110 12
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhhh
Q 015669 253 VKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDH 332 (403)
Q Consensus 253 ~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~~ 332 (403)
..|+.++++|++++. ..+.++|+++|+|+||.+++.++... ..+++.+...|........
T Consensus 79 ~~~~~aa~~~l~~~~---~~~~~kig~vGfc~GG~~a~~~a~~~---------------~~~~a~v~~yg~~~~~~~~-- 138 (218)
T PF01738_consen 79 AADLQAAVDYLRAQP---EVDPGKIGVVGFCWGGKLALLLAARD---------------PRVDAAVSFYGGSPPPPPL-- 138 (218)
T ss_dssp HHHHHHHHHHHHCTT---TCEEEEEEEEEETHHHHHHHHHHCCT---------------TTSSEEEEES-SSSGGGHH--
T ss_pred HHHHHHHHHHHHhcc---ccCCCcEEEEEEecchHHhhhhhhhc---------------cccceEEEEcCCCCCCcch--
Confidence 456667788887653 25678999999999999999876431 3678888877611111000
Q ss_pred hhhhhhhHHHHhhhhcCchhhhcCCccccccCCCcccccCCCCcEEEEEeCCCCCCCHHHHHH
Q 015669 333 FHSRGLYRSIFLSIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADARIL 395 (403)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~~~S~~ 395 (403)
....++..|+++++|++|+.+|.+..++
T Consensus 139 -----------------------------------~~~~~~~~P~l~~~g~~D~~~~~~~~~~ 166 (218)
T PF01738_consen 139 -----------------------------------EDAPKIKAPVLILFGENDPFFPPEEVEA 166 (218)
T ss_dssp -----------------------------------HHGGG--S-EEEEEETT-TTS-HHHHHH
T ss_pred -----------------------------------hhhcccCCCEeecCccCCCCCChHHHHH
Confidence 0111223699999999999999998665
No 54
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.27 E-value=7.4e-11 Score=113.70 Aligned_cols=125 Identities=18% Similarity=0.179 Sum_probs=85.4
Q ss_pred ceeecCCC-ceEEEEEeeCCCCCCCcEEEEEcCC-cccCCccccchHHHHHHHhCCCeEEEecccCCCCCC-----chhh
Q 015669 180 GIVYGDQP-RNRLDLYFPKSSDGPKPVVAFITGG-AWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGT-----IKDM 252 (403)
Q Consensus 180 ~i~y~~~~-~~~l~vy~P~~~~~~~PvVV~iHGG-g~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~-----~~~~ 252 (403)
.+.|...+ .+...++.|.+. +.+.||++||| ++..|+...+..+++.|+++||.|+++|+|+.+.+. +...
T Consensus 4 ~~~~~~~~~~l~g~~~~p~~~--~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~~~~~~~ 81 (274)
T TIGR03100 4 ALTFSCEGETLVGVLHIPGAS--HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGENLGFEGI 81 (274)
T ss_pred eEEEEcCCcEEEEEEEcCCCC--CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCHHHH
Confidence 34443333 244556677643 23456666665 455555555567889999999999999999977643 2234
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCC
Q 015669 253 VKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYN 325 (403)
Q Consensus 253 ~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d 325 (403)
..|+.++++++++... + .++|+++|+|+||.+++.++... ..+++++.+++++.
T Consensus 82 ~~d~~~~~~~l~~~~~--g--~~~i~l~G~S~Gg~~a~~~a~~~---------------~~v~~lil~~p~~~ 135 (274)
T TIGR03100 82 DADIAAAIDAFREAAP--H--LRRIVAWGLCDAASAALLYAPAD---------------LRVAGLVLLNPWVR 135 (274)
T ss_pred HHHHHHHHHHHHhhCC--C--CCcEEEEEECHHHHHHHHHhhhC---------------CCccEEEEECCccC
Confidence 6788888988876421 2 25799999999999988776431 36888888887644
No 55
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.26 E-value=6.9e-11 Score=108.35 Aligned_cols=88 Identities=23% Similarity=0.250 Sum_probs=64.0
Q ss_pred CcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchh--hHHHHHHHHHH-HHHhhhhcCCCCCcEEE
Q 015669 203 KPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKD--MVKDASQGISF-VCNNISEYGGDPDRIYL 279 (403)
Q Consensus 203 ~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~--~~~D~~~al~~-l~~~~~~~g~d~~rI~l 279 (403)
+|+||++||. .++...+..+...|+ +||.|+++|+|+.+....+. ...+..+.+++ +....+.+ +.+++.+
T Consensus 1 ~~~vv~~hG~---~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l 74 (251)
T TIGR03695 1 KPVLVFLHGF---LGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQL--GIEPFFL 74 (251)
T ss_pred CCEEEEEcCC---CCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHc--CCCeEEE
Confidence 3789999993 455566777888887 89999999999987664432 23444555555 44433433 3468999
Q ss_pred EEcCchHHHHHHHHHHH
Q 015669 280 MGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 280 ~G~S~GG~la~~~a~~~ 296 (403)
+|||+||.+++.++...
T Consensus 75 ~G~S~Gg~ia~~~a~~~ 91 (251)
T TIGR03695 75 VGYSMGGRIALYYALQY 91 (251)
T ss_pred EEeccHHHHHHHHHHhC
Confidence 99999999999988764
No 56
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.26 E-value=2.2e-10 Score=107.92 Aligned_cols=92 Identities=21% Similarity=0.157 Sum_probs=58.3
Q ss_pred CCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchhh---HHHHHHHHHHHHHhhhhcCCCCCcE
Q 015669 201 GPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDM---VKDASQGISFVCNNISEYGGDPDRI 277 (403)
Q Consensus 201 ~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~~---~~D~~~al~~l~~~~~~~g~d~~rI 277 (403)
+..|+||++||+.. ++..++..+...+.+.||.|+++|+|+.+.+..+.. ..+.....+.+...++..+. +++
T Consensus 23 ~~~~~vl~~hG~~g--~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 98 (288)
T TIGR01250 23 GEKIKLLLLHGGPG--MSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKLGL--DKF 98 (288)
T ss_pred CCCCeEEEEcCCCC--ccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHcCC--CcE
Confidence 34578999999532 233344445555555599999999999876654311 11222233333333333343 579
Q ss_pred EEEEcCchHHHHHHHHHHH
Q 015669 278 YLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 278 ~l~G~S~GG~la~~~a~~~ 296 (403)
+++|||+||.+++.++...
T Consensus 99 ~liG~S~Gg~ia~~~a~~~ 117 (288)
T TIGR01250 99 YLLGHSWGGMLAQEYALKY 117 (288)
T ss_pred EEEEeehHHHHHHHHHHhC
Confidence 9999999999999988754
No 57
>PRK06489 hypothetical protein; Provisional
Probab=99.24 E-value=4.1e-10 Score=112.69 Aligned_cols=101 Identities=13% Similarity=0.071 Sum_probs=61.5
Q ss_pred EEEEeeCCCCCC-------CcEEEEEcCCcccCCcc-ccc-hHHHHHH-------HhCCCeEEEecccCCCCCCchh---
Q 015669 191 LDLYFPKSSDGP-------KPVVAFITGGAWIIGYK-AWG-SLLGQQL-------SERDIIVACIDYRNFPQGTIKD--- 251 (403)
Q Consensus 191 l~vy~P~~~~~~-------~PvVV~iHGGg~~~g~~-~~~-~~~~~~L-------a~~G~~Vv~~dyR~~~~~~~~~--- 251 (403)
+++++....... .|.||++||++. +. .+. ..+...| ..++|.|+++|+||++.+..+.
T Consensus 50 ~~i~y~~~G~~~~~~~~~~gpplvllHG~~~---~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~ 126 (360)
T PRK06489 50 LRLHYTTLGTPHRNADGEIDNAVLVLHGTGG---SGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGL 126 (360)
T ss_pred ceEEEEecCCCCcccccCCCCeEEEeCCCCC---chhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCC
Confidence 556665443322 689999999542 32 222 1343333 2468999999999987664321
Q ss_pred -------hHHHHHH-HHHHHHHhhhhcCCCCCcEE-EEEcCchHHHHHHHHHHHHHH
Q 015669 252 -------MVKDASQ-GISFVCNNISEYGGDPDRIY-LMGQSAGAHIAACTLLEQAIK 299 (403)
Q Consensus 252 -------~~~D~~~-al~~l~~~~~~~g~d~~rI~-l~G~S~GG~la~~~a~~~~~~ 299 (403)
.+.|..+ .+.++.+ ..++ +++. |+|+||||.+|+.++...+..
T Consensus 127 ~~~~~~~~~~~~a~~~~~~l~~---~lgi--~~~~~lvG~SmGG~vAl~~A~~~P~~ 178 (360)
T PRK06489 127 RAAFPRYDYDDMVEAQYRLVTE---GLGV--KHLRLILGTSMGGMHAWMWGEKYPDF 178 (360)
T ss_pred CCCCCcccHHHHHHHHHHHHHH---hcCC--CceeEEEEECHHHHHHHHHHHhCchh
Confidence 1333322 2233322 2344 4665 899999999999999876433
No 58
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.23 E-value=8.6e-11 Score=107.89 Aligned_cols=84 Identities=14% Similarity=0.092 Sum_probs=58.5
Q ss_pred CcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchhhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEc
Q 015669 203 KPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQ 282 (403)
Q Consensus 203 ~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~ 282 (403)
.|.||++||. .++...+..+...|+ ++|.|+++|+|+++...... ..+..+.++.+.+.. .++++++||
T Consensus 4 ~~~iv~~HG~---~~~~~~~~~~~~~l~-~~~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~------~~~~~lvG~ 72 (245)
T TIGR01738 4 NVHLVLIHGW---GMNAEVFRCLDEELS-AHFTLHLVDLPGHGRSRGFG-PLSLADAAEAIAAQA------PDPAIWLGW 72 (245)
T ss_pred CceEEEEcCC---CCchhhHHHHHHhhc-cCeEEEEecCCcCccCCCCC-CcCHHHHHHHHHHhC------CCCeEEEEE
Confidence 4789999993 345555566777775 47999999999987654322 123334444444332 268999999
Q ss_pred CchHHHHHHHHHHHH
Q 015669 283 SAGAHIAACTLLEQA 297 (403)
Q Consensus 283 S~GG~la~~~a~~~~ 297 (403)
|+||.+++.++...+
T Consensus 73 S~Gg~~a~~~a~~~p 87 (245)
T TIGR01738 73 SLGGLVALHIAATHP 87 (245)
T ss_pred cHHHHHHHHHHHHCH
Confidence 999999998887653
No 59
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.23 E-value=1.4e-10 Score=116.15 Aligned_cols=88 Identities=16% Similarity=0.090 Sum_probs=59.1
Q ss_pred CCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchh-hHHHHHHHHHHHHHhhhhcCCCCCcEEEE
Q 015669 202 PKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKD-MVKDASQGISFVCNNISEYGGDPDRIYLM 280 (403)
Q Consensus 202 ~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~-~~~D~~~al~~l~~~~~~~g~d~~rI~l~ 280 (403)
..|+||++||. .++...+..+...|++ +|.|+++|+||++.+..+. ...+.....+++.+.++..+. ++++|+
T Consensus 87 ~gp~lvllHG~---~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l~~--~~~~lv 160 (360)
T PLN02679 87 SGPPVLLVHGF---GASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEVVQ--KPTVLI 160 (360)
T ss_pred CCCeEEEECCC---CCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHhcC--CCeEEE
Confidence 34789999993 3444555666677754 8999999999988765432 111222333344444444444 589999
Q ss_pred EcCchHHHHHHHHHH
Q 015669 281 GQSAGAHIAACTLLE 295 (403)
Q Consensus 281 G~S~GG~la~~~a~~ 295 (403)
|||+||.+++.++..
T Consensus 161 GhS~Gg~ia~~~a~~ 175 (360)
T PLN02679 161 GNSVGSLACVIAASE 175 (360)
T ss_pred EECHHHHHHHHHHHh
Confidence 999999999877753
No 60
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.23 E-value=6.5e-11 Score=112.12 Aligned_cols=121 Identities=25% Similarity=0.333 Sum_probs=93.4
Q ss_pred EEEEEeeCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchhhHHHHHHHHHHHHHhhhh
Q 015669 190 RLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISE 269 (403)
Q Consensus 190 ~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~~~ 269 (403)
.+.||+|+. .+.+|||||+|| ..-...++..+.+++|+.||+||.+|+.......-...+.+..+.++|+.+.++.
T Consensus 5 ~l~v~~P~~-~g~yPVv~f~~G---~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~ 80 (259)
T PF12740_consen 5 PLLVYYPSS-AGTYPVVLFLHG---FLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLES 80 (259)
T ss_pred CeEEEecCC-CCCcCEEEEeCC---cCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchh
Confidence 488999976 567999999999 3345566888999999999999999955433334456688899999999887655
Q ss_pred c-----CCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccC
Q 015669 270 Y-----GGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGG 323 (403)
Q Consensus 270 ~-----g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~ 323 (403)
. ..|-++|.|+|||.||.+|..+++...... ....+++++.+.++
T Consensus 81 ~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~---------~~~~~~ali~lDPV 130 (259)
T PF12740_consen 81 KLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSS---------LDLRFSALILLDPV 130 (259)
T ss_pred hccccccccccceEEeeeCCCCHHHHHHHhhhcccc---------cccceeEEEEeccc
Confidence 4 358889999999999999998887652111 12468888888774
No 61
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.22 E-value=3.1e-10 Score=109.38 Aligned_cols=93 Identities=17% Similarity=0.179 Sum_probs=61.2
Q ss_pred CCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCch-hhHHHHHHHHHHHHHhhhhcCCCCCcEE
Q 015669 200 DGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIK-DMVKDASQGISFVCNNISEYGGDPDRIY 278 (403)
Q Consensus 200 ~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~-~~~~D~~~al~~l~~~~~~~g~d~~rI~ 278 (403)
++++|.|||+||.+ ++...+..+...|+++||.|+++|+|+.+..... ....+..+..+.+.+.+++.+. .++++
T Consensus 15 ~~~~p~vvliHG~~---~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~-~~~v~ 90 (273)
T PLN02211 15 NRQPPHFVLIHGIS---GGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLPE-NEKVI 90 (273)
T ss_pred cCCCCeEEEECCCC---CCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcCC-CCCEE
Confidence 34578999999943 3444566777888888999999999997654211 1111112222333333333322 36899
Q ss_pred EEEcCchHHHHHHHHHHH
Q 015669 279 LMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 279 l~G~S~GG~la~~~a~~~ 296 (403)
|+||||||.++..++...
T Consensus 91 lvGhS~GG~v~~~~a~~~ 108 (273)
T PLN02211 91 LVGHSAGGLSVTQAIHRF 108 (273)
T ss_pred EEEECchHHHHHHHHHhC
Confidence 999999999999887644
No 62
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.22 E-value=1.2e-10 Score=110.25 Aligned_cols=83 Identities=16% Similarity=0.133 Sum_probs=57.3
Q ss_pred cEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchhhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcC
Q 015669 204 PVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQS 283 (403)
Q Consensus 204 PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S 283 (403)
|.||++||. .++...+..+...|. +.|.|+++|+|+++.+..+.. .+..+.++.+.+ ++ .++++++|||
T Consensus 14 ~~ivllHG~---~~~~~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~~-~~~~~~~~~l~~----~~--~~~~~lvGhS 82 (256)
T PRK10349 14 VHLVLLHGW---GLNAEVWRCIDEELS-SHFTLHLVDLPGFGRSRGFGA-LSLADMAEAVLQ----QA--PDKAIWLGWS 82 (256)
T ss_pred CeEEEECCC---CCChhHHHHHHHHHh-cCCEEEEecCCCCCCCCCCCC-CCHHHHHHHHHh----cC--CCCeEEEEEC
Confidence 579999993 344455566777775 459999999999876654321 122223333332 23 3689999999
Q ss_pred chHHHHHHHHHHHH
Q 015669 284 AGAHIAACTLLEQA 297 (403)
Q Consensus 284 ~GG~la~~~a~~~~ 297 (403)
+||.+++.++...+
T Consensus 83 ~Gg~ia~~~a~~~p 96 (256)
T PRK10349 83 LGGLVASQIALTHP 96 (256)
T ss_pred HHHHHHHHHHHhCh
Confidence 99999999987653
No 63
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.22 E-value=2.9e-10 Score=113.33 Aligned_cols=111 Identities=19% Similarity=0.281 Sum_probs=73.4
Q ss_pred eceeecCCCceEEEEEeeCCCCCCCcEEEEEcCC---cccCCccccchHHHHHHHhCCCeEEEecccCCCCCC----chh
Q 015669 179 RGIVYGDQPRNRLDLYFPKSSDGPKPVVAFITGG---AWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGT----IKD 251 (403)
Q Consensus 179 ~~i~y~~~~~~~l~vy~P~~~~~~~PvVV~iHGG---g~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~----~~~ 251 (403)
..+++. .+...+..|.|......++.||++||- ++.. +......++++|+++||.|+++|+|+.+... +.+
T Consensus 39 ~~~v~~-~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~-d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~~~~d 116 (350)
T TIGR01836 39 KEVVYR-EDKVVLYRYTPVKDNTHKTPLLIVYALVNRPYML-DLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYLTLDD 116 (350)
T ss_pred CceEEE-cCcEEEEEecCCCCcCCCCcEEEeccccccceec-cCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcCCHHH
Confidence 344543 344567777776433334458999982 1111 1123457889999999999999999865332 223
Q ss_pred hH-HHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHH
Q 015669 252 MV-KDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 252 ~~-~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
.. .|+.++++++.++. + .+++.++|||+||.+++.++...
T Consensus 117 ~~~~~~~~~v~~l~~~~---~--~~~i~lvGhS~GG~i~~~~~~~~ 157 (350)
T TIGR01836 117 YINGYIDKCVDYICRTS---K--LDQISLLGICQGGTFSLCYAALY 157 (350)
T ss_pred HHHHHHHHHHHHHHHHh---C--CCcccEEEECHHHHHHHHHHHhC
Confidence 33 34677788887653 2 36899999999999998877654
No 64
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.22 E-value=1.4e-10 Score=108.38 Aligned_cols=86 Identities=19% Similarity=0.210 Sum_probs=64.0
Q ss_pred CcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchhhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEc
Q 015669 203 KPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQ 282 (403)
Q Consensus 203 ~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~ 282 (403)
.|+|||+||. .++...+..+...| ++|.|+++|+||++.+..+.. .+.....+++.+.+++.+. +++.++||
T Consensus 2 ~p~vvllHG~---~~~~~~w~~~~~~l--~~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~l~~~l~~~~~--~~~~lvG~ 73 (242)
T PRK11126 2 LPWLVFLHGL---LGSGQDWQPVGEAL--PDYPRLYIDLPGHGGSAAISV-DGFADVSRLLSQTLQSYNI--LPYWLVGY 73 (242)
T ss_pred CCEEEEECCC---CCChHHHHHHHHHc--CCCCEEEecCCCCCCCCCccc-cCHHHHHHHHHHHHHHcCC--CCeEEEEE
Confidence 4789999994 33444556666666 379999999999887655432 3555566667666665543 69999999
Q ss_pred CchHHHHHHHHHHH
Q 015669 283 SAGAHIAACTLLEQ 296 (403)
Q Consensus 283 S~GG~la~~~a~~~ 296 (403)
|+||.+++.++...
T Consensus 74 S~Gg~va~~~a~~~ 87 (242)
T PRK11126 74 SLGGRIAMYYACQG 87 (242)
T ss_pred CHHHHHHHHHHHhC
Confidence 99999999998764
No 65
>PLN02578 hydrolase
Probab=99.21 E-value=1.9e-10 Score=114.96 Aligned_cols=87 Identities=18% Similarity=0.074 Sum_probs=57.9
Q ss_pred CCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchhhHHH----HHHHHHHHHHhhhhcCCCCCcE
Q 015669 202 PKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKD----ASQGISFVCNNISEYGGDPDRI 277 (403)
Q Consensus 202 ~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~~~~D----~~~al~~l~~~~~~~g~d~~rI 277 (403)
+.|.||++||. .++...+......|+ ++|.|+++|+||++.+..+....+ ..++.+++.+. + .+++
T Consensus 85 ~g~~vvliHG~---~~~~~~w~~~~~~l~-~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~----~--~~~~ 154 (354)
T PLN02578 85 EGLPIVLIHGF---GASAFHWRYNIPELA-KKYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEV----V--KEPA 154 (354)
T ss_pred CCCeEEEECCC---CCCHHHHHHHHHHHh-cCCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHh----c--cCCe
Confidence 34678999993 334445556667775 469999999999877654421111 12233333332 2 2689
Q ss_pred EEEEcCchHHHHHHHHHHHHH
Q 015669 278 YLMGQSAGAHIAACTLLEQAI 298 (403)
Q Consensus 278 ~l~G~S~GG~la~~~a~~~~~ 298 (403)
+++|||+||.+++.++...+.
T Consensus 155 ~lvG~S~Gg~ia~~~A~~~p~ 175 (354)
T PLN02578 155 VLVGNSLGGFTALSTAVGYPE 175 (354)
T ss_pred EEEEECHHHHHHHHHHHhChH
Confidence 999999999999999987643
No 66
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.21 E-value=1.3e-10 Score=107.90 Aligned_cols=148 Identities=21% Similarity=0.221 Sum_probs=78.6
Q ss_pred CCCCcEEEEEcCCcccCCccccchHHHH-HHHhCCCeEEEecccC------CCC---CCch---------hhHHHHHHHH
Q 015669 200 DGPKPVVAFITGGAWIIGYKAWGSLLGQ-QLSERDIIVACIDYRN------FPQ---GTIK---------DMVKDASQGI 260 (403)
Q Consensus 200 ~~~~PvVV~iHGGg~~~g~~~~~~~~~~-~La~~G~~Vv~~dyR~------~~~---~~~~---------~~~~D~~~al 260 (403)
.+..|+|||+||-| .+...+..... .+...+..++.++-.. .+. ..++ ....++....
T Consensus 11 ~~~~~lvi~LHG~G---~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~ 87 (216)
T PF02230_consen 11 GKAKPLVILLHGYG---DSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESA 87 (216)
T ss_dssp ST-SEEEEEE--TT---S-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHH
T ss_pred CCCceEEEEECCCC---CCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHH
Confidence 45779999999933 22222222222 1122367777765321 111 1111 1133444444
Q ss_pred HHHHHhh---hhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhhhhhhhh
Q 015669 261 SFVCNNI---SEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDHFHSRG 337 (403)
Q Consensus 261 ~~l~~~~---~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~~~~~~~ 337 (403)
+.+.+.+ .+.+++++||+++|+|.||.+++.+++.. +..+.+++.++|+.........
T Consensus 88 ~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~--------------p~~~~gvv~lsG~~~~~~~~~~----- 148 (216)
T PF02230_consen 88 ERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRY--------------PEPLAGVVALSGYLPPESELED----- 148 (216)
T ss_dssp HHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCT--------------SSTSSEEEEES---TTGCCCHC-----
T ss_pred HHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHc--------------CcCcCEEEEeeccccccccccc-----
Confidence 4333332 24579999999999999999999998764 4578999999996543211000
Q ss_pred hhHHHHhhhhcCchhhhcCCccccccCCCcccccCCCCcEEEEEeCCCCCCCHHHHHHHHHH
Q 015669 338 LYRSIFLSIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADARILQILF 399 (403)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~~~S~~l~lf 399 (403)
. ... ....|++++||++|++||++.++....+
T Consensus 149 -------------------~----~~~-------~~~~pi~~~hG~~D~vvp~~~~~~~~~~ 180 (216)
T PF02230_consen 149 -------------------R----PEA-------LAKTPILIIHGDEDPVVPFEWAEKTAEF 180 (216)
T ss_dssp -------------------C----HCC-------CCTS-EEEEEETT-SSSTHHHHHHHHHH
T ss_pred -------------------c----ccc-------cCCCcEEEEecCCCCcccHHHHHHHHHH
Confidence 0 000 0025999999999999999999975433
No 67
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.21 E-value=5.6e-10 Score=121.69 Aligned_cols=162 Identities=11% Similarity=0.154 Sum_probs=100.2
Q ss_pred HHHHHHHhCCCeEEEecccCCCCC--Cc----hhhHHHHHHHHHHHHHhhhhc-----------CCCCCcEEEEEcCchH
Q 015669 224 LLGQQLSERDIIVACIDYRNFPQG--TI----KDMVKDASQGISFVCNNISEY-----------GGDPDRIYLMGQSAGA 286 (403)
Q Consensus 224 ~~~~~La~~G~~Vv~~dyR~~~~~--~~----~~~~~D~~~al~~l~~~~~~~-----------g~d~~rI~l~G~S~GG 286 (403)
.+..+|+++||+||..|.||...+ .+ .....|..++++|+..+...| .....+|+++|.|+||
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 455889999999999999996443 21 456789999999998653221 1225799999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhhhhh----hhh--------hhHHHHhhh------hc
Q 015669 287 HIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDHFH----SRG--------LYRSIFLSI------MD 348 (403)
Q Consensus 287 ~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~~~~----~~~--------~~~~~~~~~------~~ 348 (403)
.+++.+|... ++.++++|..+++.++.+...... ..+ +....+... ..
T Consensus 350 ~~~~~aAa~~--------------pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~ 415 (767)
T PRK05371 350 TLPNAVATTG--------------VEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLR 415 (767)
T ss_pred HHHHHHHhhC--------------CCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhc
Confidence 9999887654 456788888777666543321100 000 000000000 00
Q ss_pred Cchh-----------hhc----CCccccccCCCcccccCCCCcEEEEEeCCCCCCCHHHHHHHHHHHhc
Q 015669 349 GEES-----------LRQ----YSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADARILQILFKEL 402 (403)
Q Consensus 349 ~~~~-----------~~~----~sp~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~~~S~~l~lf~~l 402 (403)
.... ... +++ .+.....+.++.++..|+|++||..|..|+++++.+ +|+++
T Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~y~~-fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~--ly~aL 481 (767)
T PRK05371 416 HNEACEKLLAELTAAQDRKTGDYND-FWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQ--WWDAL 481 (767)
T ss_pred chHHHHHHHhhhhhhhhhcCCCccH-HHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHH--HHHHH
Confidence 0000 000 000 011122345566778999999999999999999876 67654
No 68
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.21 E-value=8.1e-11 Score=120.76 Aligned_cols=182 Identities=18% Similarity=0.109 Sum_probs=115.0
Q ss_pred CceEEEEEeeCC--CCCCCcEEEEEcCCcccCC-ccc---cchHHHHHHHhCCCeEEEecccCCCCCCc--h--------
Q 015669 187 PRNRLDLYFPKS--SDGPKPVVAFITGGAWIIG-YKA---WGSLLGQQLSERDIIVACIDYRNFPQGTI--K-------- 250 (403)
Q Consensus 187 ~~~~l~vy~P~~--~~~~~PvVV~iHGGg~~~g-~~~---~~~~~~~~La~~G~~Vv~~dyR~~~~~~~--~-------- 250 (403)
..++.-||.|.+ ..+++|+|+++.||-.+.- +.. ....-...||+.||.||.+|-||...-.+ .
T Consensus 624 ~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmG 703 (867)
T KOG2281|consen 624 LTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMG 703 (867)
T ss_pred cEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccC
Confidence 345678999986 4567999999999865432 211 11223367889999999999999654332 2
Q ss_pred -hhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhh
Q 015669 251 -DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDL 329 (403)
Q Consensus 251 -~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~ 329 (403)
-.++|+..+++|+.++.. -+|.+||+|-|+|+||++++.++.+. +.-++..|+-.++.++.-.
T Consensus 704 qVE~eDQVeglq~Laeq~g--fidmdrV~vhGWSYGGYLSlm~L~~~--------------P~IfrvAIAGapVT~W~~Y 767 (867)
T KOG2281|consen 704 QVEVEDQVEGLQMLAEQTG--FIDMDRVGVHGWSYGGYLSLMGLAQY--------------PNIFRVAIAGAPVTDWRLY 767 (867)
T ss_pred eeeehhhHHHHHHHHHhcC--cccchheeEeccccccHHHHHHhhcC--------------cceeeEEeccCcceeeeee
Confidence 237899999999988654 38999999999999999999988775 3445666655555554422
Q ss_pred hhhhhhhhhhHHHHhhhhcCchhhhcCCccccccCCCcccccCCCC-cEEEEEeCCCCCCCHHHHHH
Q 015669 330 VDHFHSRGLYRSIFLSIMDGEESLRQYSPEVLVQDPNTRHAVSLLP-PIILFHGTADYSIPADARIL 395 (403)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~p-PvLIiHG~~D~vVP~~~S~~ 395 (403)
-..+..+ .++-.-.++.....-+-...+... +..+ .+|++||--|.-|.+.+.-.
T Consensus 768 DTgYTER-----YMg~P~~nE~gY~agSV~~~Vekl------pdepnRLlLvHGliDENVHF~Hts~ 823 (867)
T KOG2281|consen 768 DTGYTER-----YMGYPDNNEHGYGAGSVAGHVEKL------PDEPNRLLLVHGLIDENVHFAHTSR 823 (867)
T ss_pred cccchhh-----hcCCCccchhcccchhHHHHHhhC------CCCCceEEEEecccccchhhhhHHH
Confidence 1111111 111110111111111111111111 1122 59999999999999988765
No 69
>COG0400 Predicted esterase [General function prediction only]
Probab=99.20 E-value=1.7e-10 Score=106.44 Aligned_cols=145 Identities=23% Similarity=0.228 Sum_probs=98.4
Q ss_pred CCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccC-----------CCCCCch--hhHHHHHHHHHHHHHh
Q 015669 200 DGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRN-----------FPQGTIK--DMVKDASQGISFVCNN 266 (403)
Q Consensus 200 ~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~-----------~~~~~~~--~~~~D~~~al~~l~~~ 266 (403)
+...|+||++||- +|+...+..+...+. .+..++.+.=+. ...+.+. +...+.....+++...
T Consensus 15 ~p~~~~iilLHG~---Ggde~~~~~~~~~~~-P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~ 90 (207)
T COG0400 15 DPAAPLLILLHGL---GGDELDLVPLPELIL-PNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEEL 90 (207)
T ss_pred CCCCcEEEEEecC---CCChhhhhhhhhhcC-CCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHH
Confidence 4557899999993 366555555444332 357777664332 1112222 2244556667778888
Q ss_pred hhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhhhhhhhhhhHHHHhhh
Q 015669 267 ISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDHFHSRGLYRSIFLSI 346 (403)
Q Consensus 267 ~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~~~~~~~~~~~~~~~~ 346 (403)
..++++|++|++++|+|.||.+++.+.+.. +.++++.+.++|.+.+....
T Consensus 91 ~~~~gi~~~~ii~~GfSqGA~ial~~~l~~--------------~~~~~~ail~~g~~~~~~~~---------------- 140 (207)
T COG0400 91 AEEYGIDSSRIILIGFSQGANIALSLGLTL--------------PGLFAGAILFSGMLPLEPEL---------------- 140 (207)
T ss_pred HHHhCCChhheEEEecChHHHHHHHHHHhC--------------chhhccchhcCCcCCCCCcc----------------
Confidence 888999999999999999999999998875 34678888888754433110
Q ss_pred hcCchhhhcCCccccccCCCcccccCCCCcEEEEEeCCCCCCCHHHHHHHHHHH
Q 015669 347 MDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADARILQILFK 400 (403)
Q Consensus 347 ~~~~~~~~~~sp~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~~~S~~l~lf~ 400 (403)
.+ . ....|++++||+.|++||...+.+++-+.
T Consensus 141 ----------~~--~----------~~~~pill~hG~~Dpvvp~~~~~~l~~~l 172 (207)
T COG0400 141 ----------LP--D----------LAGTPILLSHGTEDPVVPLALAEALAEYL 172 (207)
T ss_pred ----------cc--c----------cCCCeEEEeccCcCCccCHHHHHHHHHHH
Confidence 00 0 01259999999999999999999865443
No 70
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.19 E-value=5.4e-10 Score=115.58 Aligned_cols=89 Identities=17% Similarity=0.201 Sum_probs=56.8
Q ss_pred CCcEEEEEcCCcccCCccccch-HHHHHHH---hCCCeEEEecccCCCCCCchh----hHHHHHHHHHHHHHhhhhcCCC
Q 015669 202 PKPVVAFITGGAWIIGYKAWGS-LLGQQLS---ERDIIVACIDYRNFPQGTIKD----MVKDASQGISFVCNNISEYGGD 273 (403)
Q Consensus 202 ~~PvVV~iHGGg~~~g~~~~~~-~~~~~La---~~G~~Vv~~dyR~~~~~~~~~----~~~D~~~al~~l~~~~~~~g~d 273 (403)
.+|.|||+||.+ ++...+. .....|+ +++|.|+++|+||++.+..+. .+++..+.+. ...++..++
T Consensus 200 ~k~~VVLlHG~~---~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~--~~ll~~lg~- 273 (481)
T PLN03087 200 AKEDVLFIHGFI---SSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIE--RSVLERYKV- 273 (481)
T ss_pred CCCeEEEECCCC---ccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHH--HHHHHHcCC-
Confidence 357999999943 3333332 2334444 469999999999987654331 1333333331 112233343
Q ss_pred CCcEEEEEcCchHHHHHHHHHHHH
Q 015669 274 PDRIYLMGQSAGAHIAACTLLEQA 297 (403)
Q Consensus 274 ~~rI~l~G~S~GG~la~~~a~~~~ 297 (403)
++++++||||||.+++.++...+
T Consensus 274 -~k~~LVGhSmGG~iAl~~A~~~P 296 (481)
T PLN03087 274 -KSFHIVAHSLGCILALALAVKHP 296 (481)
T ss_pred -CCEEEEEECHHHHHHHHHHHhCh
Confidence 58999999999999999887753
No 71
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.19 E-value=4.3e-11 Score=118.16 Aligned_cols=127 Identities=25% Similarity=0.254 Sum_probs=76.7
Q ss_pred eeceeecCCCc--eEEEEEeeCCCCCCCcEEEEEcCCcccC----Cc-----------cccchHHHHHHHhCCCeEEEec
Q 015669 178 RRGIVYGDQPR--NRLDLYFPKSSDGPKPVVAFITGGAWII----GY-----------KAWGSLLGQQLSERDIIVACID 240 (403)
Q Consensus 178 ~~~i~y~~~~~--~~l~vy~P~~~~~~~PvVV~iHGGg~~~----g~-----------~~~~~~~~~~La~~G~~Vv~~d 240 (403)
.+.+.+...+. ...-+++|+...++.|+||++||.|... |. ......++.+||++||+|+++|
T Consensus 88 ~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D 167 (390)
T PF12715_consen 88 REKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPD 167 (390)
T ss_dssp EEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE-
T ss_pred EEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEc
Confidence 34454444343 4666778988778999999999954321 10 0112346889999999999999
Q ss_pred ccCCCCCCc----------h-----------------hhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHH
Q 015669 241 YRNFPQGTI----------K-----------------DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTL 293 (403)
Q Consensus 241 yR~~~~~~~----------~-----------------~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a 293 (403)
-+++++-.- . ....|...+++|++..- .+|++||+++|+||||..++.++
T Consensus 168 ~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slp---eVD~~RIG~~GfSmGg~~a~~La 244 (390)
T PF12715_consen 168 ALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLP---EVDPDRIGCMGFSMGGYRAWWLA 244 (390)
T ss_dssp -TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-T---TEEEEEEEEEEEGGGHHHHHHHH
T ss_pred cccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCc---ccCccceEEEeecccHHHHHHHH
Confidence 887543210 0 01446667888887764 48999999999999999999888
Q ss_pred HHHHHHhcCCCCCCcccccccceeeeecc
Q 015669 294 LEQAIKETGEGESTTWSVSQIRAYFGLSG 322 (403)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~ik~~v~isg 322 (403)
... +.|++.+..+-
T Consensus 245 ALD---------------dRIka~v~~~~ 258 (390)
T PF12715_consen 245 ALD---------------DRIKATVANGY 258 (390)
T ss_dssp HH----------------TT--EEEEES-
T ss_pred Hcc---------------hhhHhHhhhhh
Confidence 654 57777766544
No 72
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.18 E-value=9.9e-10 Score=103.81 Aligned_cols=156 Identities=19% Similarity=0.224 Sum_probs=109.9
Q ss_pred eeecCCC-ceEEEEEeeCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccC--CCCCC---------
Q 015669 181 IVYGDQP-RNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRN--FPQGT--------- 248 (403)
Q Consensus 181 i~y~~~~-~~~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~--~~~~~--------- 248 (403)
+.|...+ .+...+..|+..... |+||.+|+ ..|-.......++.||++||.|+++|.-. .....
T Consensus 5 v~~~~~~~~~~~~~a~P~~~~~~-P~VIv~he---i~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~ 80 (236)
T COG0412 5 VTIPAPDGELPAYLARPAGAGGF-PGVIVLHE---IFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELE 80 (236)
T ss_pred eEeeCCCceEeEEEecCCcCCCC-CEEEEEec---ccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHh
Confidence 3443333 344556667664444 99999999 66766677889999999999999999533 11111
Q ss_pred --------chhhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeee
Q 015669 249 --------IKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGL 320 (403)
Q Consensus 249 --------~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~i 320 (403)
......|+.++++|+..+.. +++++|+++|+|+||.+++.++... +.+++.+..
T Consensus 81 ~~~~~~~~~~~~~~d~~a~~~~L~~~~~---~~~~~ig~~GfC~GG~~a~~~a~~~---------------~~v~a~v~f 142 (236)
T COG0412 81 TGLVERVDPAEVLADIDAALDYLARQPQ---VDPKRIGVVGFCMGGGLALLAATRA---------------PEVKAAVAF 142 (236)
T ss_pred hhhhccCCHHHHHHHHHHHHHHHHhCCC---CCCceEEEEEEcccHHHHHHhhccc---------------CCccEEEEe
Confidence 12346788899999987642 7889999999999999999887543 268888887
Q ss_pred ccCCChhhhhhhhhhhhhhHHHHhhhhcCchhhhcCCccccccCCCcccccCCCCcEEEEEeCCCCCCCHHHHHHH
Q 015669 321 SGGYNLFDLVDHFHSRGLYRSIFLSIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADARILQ 396 (403)
Q Consensus 321 sg~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~~~S~~l 396 (403)
.|..-.... ....+...|+|+++|+.|..+|.+.-.++
T Consensus 143 yg~~~~~~~--------------------------------------~~~~~~~~pvl~~~~~~D~~~p~~~~~~~ 180 (236)
T COG0412 143 YGGLIADDT--------------------------------------ADAPKIKVPVLLHLAGEDPYIPAADVDAL 180 (236)
T ss_pred cCCCCCCcc--------------------------------------cccccccCcEEEEecccCCCCChhHHHHH
Confidence 763211100 01223447999999999999998876653
No 73
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.18 E-value=4.7e-10 Score=111.25 Aligned_cols=103 Identities=17% Similarity=0.157 Sum_probs=67.5
Q ss_pred eEEEEEeeCCCCCCCcEEEEEcCCcccCCccc-------------------cc----hHHHHHHHhCCCeEEEecccCCC
Q 015669 189 NRLDLYFPKSSDGPKPVVAFITGGAWIIGYKA-------------------WG----SLLGQQLSERDIIVACIDYRNFP 245 (403)
Q Consensus 189 ~~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~-------------------~~----~~~~~~La~~G~~Vv~~dyR~~~ 245 (403)
+....|.|+ +++.+||++||-+...++.. .+ ..+++.|+++||.|+++|.||.+
T Consensus 10 l~~~~~~~~---~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rGHG 86 (332)
T TIGR01607 10 LKTYSWIVK---NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQGHG 86 (332)
T ss_pred EEEeeeecc---CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccccC
Confidence 345666664 46689999999554443210 11 35788999999999999999966
Q ss_pred CCC-----------chhhHHHHHHHHHHHHHhhh----------------hcCCCCCcEEEEEcCchHHHHHHHHHH
Q 015669 246 QGT-----------IKDMVKDASQGISFVCNNIS----------------EYGGDPDRIYLMGQSAGAHIAACTLLE 295 (403)
Q Consensus 246 ~~~-----------~~~~~~D~~~al~~l~~~~~----------------~~g~d~~rI~l~G~S~GG~la~~~a~~ 295 (403)
.+. +...++|+...++.+.+... .+. +...++|+||||||.+++..+..
T Consensus 87 ~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~l~GhSmGg~i~~~~~~~ 162 (332)
T TIGR01607 87 ESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKE-NRLPMYIIGLSMGGNIALRLLEL 162 (332)
T ss_pred CCccccccccchhhHHHHHHHHHHHHHHhhhhhcccccccccccccccccccc-CCCceeEeeccCccHHHHHHHHH
Confidence 432 22335566666665543210 010 12479999999999999987754
No 74
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.17 E-value=7.2e-10 Score=108.28 Aligned_cols=87 Identities=16% Similarity=0.114 Sum_probs=57.0
Q ss_pred CcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchh-----hHHHHHHHHHHHHHhhhhcCCCCCcE
Q 015669 203 KPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKD-----MVKDASQGISFVCNNISEYGGDPDRI 277 (403)
Q Consensus 203 ~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~-----~~~D~~~al~~l~~~~~~~g~d~~rI 277 (403)
.+.||++||+... ... ......+...+|.|+++|+|+++.+..+. ...|..+.+..+.+ .++. +++
T Consensus 27 ~~~lvllHG~~~~---~~~-~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~---~l~~--~~~ 97 (306)
T TIGR01249 27 GKPVVFLHGGPGS---GTD-PGCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLRE---KLGI--KNW 97 (306)
T ss_pred CCEEEEECCCCCC---CCC-HHHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHH---HcCC--CCE
Confidence 4678999995432 111 22334454568999999999987665321 23444444444433 3333 589
Q ss_pred EEEEcCchHHHHHHHHHHHHH
Q 015669 278 YLMGQSAGAHIAACTLLEQAI 298 (403)
Q Consensus 278 ~l~G~S~GG~la~~~a~~~~~ 298 (403)
.++|+|+||.+++.++...+.
T Consensus 98 ~lvG~S~GG~ia~~~a~~~p~ 118 (306)
T TIGR01249 98 LVFGGSWGSTLALAYAQTHPE 118 (306)
T ss_pred EEEEECHHHHHHHHHHHHChH
Confidence 999999999999999877643
No 75
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.16 E-value=1e-09 Score=111.58 Aligned_cols=91 Identities=18% Similarity=0.154 Sum_probs=58.4
Q ss_pred CCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchhh-HHHHHHH----HHHHHHhhhhcCCCCC
Q 015669 201 GPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDM-VKDASQG----ISFVCNNISEYGGDPD 275 (403)
Q Consensus 201 ~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~~-~~D~~~a----l~~l~~~~~~~g~d~~ 275 (403)
++.|+||++||.++ +...+......|++ +|.|+++|+|+.+.+..+.. ..+...+ ++.+.+.+... +.+
T Consensus 103 ~~~p~vvllHG~~~---~~~~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l--~~~ 176 (402)
T PLN02894 103 EDAPTLVMVHGYGA---SQGFFFRNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAK--NLS 176 (402)
T ss_pred CCCCEEEEECCCCc---chhHHHHHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHc--CCC
Confidence 45689999999543 33344445566765 69999999999876643321 1111112 22222222222 345
Q ss_pred cEEEEEcCchHHHHHHHHHHHH
Q 015669 276 RIYLMGQSAGAHIAACTLLEQA 297 (403)
Q Consensus 276 rI~l~G~S~GG~la~~~a~~~~ 297 (403)
+++|+|||+||.+++.++...+
T Consensus 177 ~~~lvGhS~GG~la~~~a~~~p 198 (402)
T PLN02894 177 NFILLGHSFGGYVAAKYALKHP 198 (402)
T ss_pred CeEEEEECHHHHHHHHHHHhCc
Confidence 8999999999999999888753
No 76
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.15 E-value=1.2e-09 Score=105.58 Aligned_cols=129 Identities=20% Similarity=0.226 Sum_probs=88.0
Q ss_pred eceeecCCCceEEEEEeeCCCCCCCcEEEEEcCCcccCCccc--cchHHHHHHHhCCCeEEEecccCCCCCCc-------
Q 015669 179 RGIVYGDQPRNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKA--WGSLLGQQLSERDIIVACIDYRNFPQGTI------- 249 (403)
Q Consensus 179 ~~i~y~~~~~~~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~--~~~~~~~~La~~G~~Vv~~dyR~~~~~~~------- 249 (403)
+.+.+.+++-..+++..+. .+..+|.||.+|| ..|+.. ....+++.+.++||.||++|+|+......
T Consensus 52 e~v~~pdg~~~~ldw~~~p-~~~~~P~vVl~HG---L~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh 127 (345)
T COG0429 52 ERLETPDGGFIDLDWSEDP-RAAKKPLVVLFHG---LEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYH 127 (345)
T ss_pred EEEEcCCCCEEEEeeccCc-cccCCceEEEEec---cCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceec
Confidence 4555666665566666642 3456799999999 444333 33567788888999999999999654432
Q ss_pred hhhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhh
Q 015669 250 KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFD 328 (403)
Q Consensus 250 ~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~ 328 (403)
.....|....++|++.. .-+.++..+|.|+||.+-+..+.+.... ..+.+.+.+|.++|+..
T Consensus 128 ~G~t~D~~~~l~~l~~~-----~~~r~~~avG~SLGgnmLa~ylgeeg~d------------~~~~aa~~vs~P~Dl~~ 189 (345)
T COG0429 128 SGETEDIRFFLDWLKAR-----FPPRPLYAVGFSLGGNMLANYLGEEGDD------------LPLDAAVAVSAPFDLEA 189 (345)
T ss_pred ccchhHHHHHHHHHHHh-----CCCCceEEEEecccHHHHHHHHHhhccC------------cccceeeeeeCHHHHHH
Confidence 34578999999999874 3357999999999996665555443211 23455566666666643
No 77
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.15 E-value=7.2e-10 Score=117.19 Aligned_cols=121 Identities=19% Similarity=0.156 Sum_probs=87.2
Q ss_pred ceEEEEEeeCCCCCCCcEEEEEcCCcccCCc-cccchHHHHHHHhCCCeEEEecccCCCCCCc------hhhHHHHHHHH
Q 015669 188 RNRLDLYFPKSSDGPKPVVAFITGGAWIIGY-KAWGSLLGQQLSERDIIVACIDYRNFPQGTI------KDMVKDASQGI 260 (403)
Q Consensus 188 ~~~l~vy~P~~~~~~~PvVV~iHGGg~~~g~-~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~------~~~~~D~~~al 260 (403)
.+..++|.|++ .++.|+||++||-+...+. ..........|+++||.|+++|+|+.+.+.. .....|+.+++
T Consensus 8 ~L~~~~~~P~~-~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~~~~~~D~~~~i 86 (550)
T TIGR00976 8 RLAIDVYRPAG-GGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLGSDEAADGYDLV 86 (550)
T ss_pred EEEEEEEecCC-CCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecCcccchHHHHHH
Confidence 35678999975 4578999999995432210 1122334567889999999999999765432 45678999999
Q ss_pred HHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChh
Q 015669 261 SFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLF 327 (403)
Q Consensus 261 ~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~ 327 (403)
+|+.++. ....+|+++|+|+||.+++.++... +..+++++..++..++.
T Consensus 87 ~~l~~q~----~~~~~v~~~G~S~GG~~a~~~a~~~--------------~~~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 87 DWIAKQP----WCDGNVGMLGVSYLAVTQLLAAVLQ--------------PPALRAIAPQEGVWDLY 135 (550)
T ss_pred HHHHhCC----CCCCcEEEEEeChHHHHHHHHhccC--------------CCceeEEeecCcccchh
Confidence 9998752 2236999999999999999887653 34677777776666544
No 78
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.14 E-value=2.8e-10 Score=109.58 Aligned_cols=123 Identities=19% Similarity=0.179 Sum_probs=84.6
Q ss_pred ceEEEEEee-CCCCCCCcEEEEEcCCcccCCccccch-H------HHHHHHhCCCeEEEecccCCCCCC------chhhH
Q 015669 188 RNRLDLYFP-KSSDGPKPVVAFITGGAWIIGYKAWGS-L------LGQQLSERDIIVACIDYRNFPQGT------IKDMV 253 (403)
Q Consensus 188 ~~~l~vy~P-~~~~~~~PvVV~iHGGg~~~g~~~~~~-~------~~~~La~~G~~Vv~~dyR~~~~~~------~~~~~ 253 (403)
.+..+||+| ....++.|+||..|+-+-......... . ....++++||+||..|.|+.+.+. .+...
T Consensus 4 ~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~~~e~ 83 (272)
T PF02129_consen 4 RLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMSPNEA 83 (272)
T ss_dssp EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTSHHHH
T ss_pred EEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCChhHH
Confidence 467899999 445778999999999331110111100 0 112388999999999999965432 33568
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhh
Q 015669 254 KDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFD 328 (403)
Q Consensus 254 ~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~ 328 (403)
.|..++++|+.++ .....||+++|.|++|..++.+|... ++.+|+++...+..|+..
T Consensus 84 ~D~~d~I~W~~~Q----pws~G~VGm~G~SY~G~~q~~~A~~~--------------~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 84 QDGYDTIEWIAAQ----PWSNGKVGMYGISYGGFTQWAAAARR--------------PPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp HHHHHHHHHHHHC----TTEEEEEEEEEETHHHHHHHHHHTTT---------------TTEEEEEEESE-SBTCC
T ss_pred HHHHHHHHHHHhC----CCCCCeEEeeccCHHHHHHHHHHhcC--------------CCCceEEEecccCCcccc
Confidence 9999999999886 23446999999999999999888643 467888888777666554
No 79
>PRK07581 hypothetical protein; Validated
Probab=99.14 E-value=8.2e-10 Score=109.29 Aligned_cols=92 Identities=11% Similarity=0.066 Sum_probs=57.8
Q ss_pred CCcEEEEEcCCcccCCccccchHH---HHHHHhCCCeEEEecccCCCCCCchh---------------hHHHHHHHHHHH
Q 015669 202 PKPVVAFITGGAWIIGYKAWGSLL---GQQLSERDIIVACIDYRNFPQGTIKD---------------MVKDASQGISFV 263 (403)
Q Consensus 202 ~~PvVV~iHGGg~~~g~~~~~~~~---~~~La~~G~~Vv~~dyR~~~~~~~~~---------------~~~D~~~al~~l 263 (403)
+.|+||+.||+++.. ..+... ...|...+|.|+++|+||++.+..+. ..+|+.+....+
T Consensus 40 ~~~~vll~~~~~~~~---~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 116 (339)
T PRK07581 40 KDNAILYPTWYSGTH---QDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLL 116 (339)
T ss_pred CCCEEEEeCCCCCCc---ccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHH
Confidence 446777777755422 222111 13565668999999999988764331 123433333334
Q ss_pred HHhhhhcCCCCCc-EEEEEcCchHHHHHHHHHHHHHHhc
Q 015669 264 CNNISEYGGDPDR-IYLMGQSAGAHIAACTLLEQAIKET 301 (403)
Q Consensus 264 ~~~~~~~g~d~~r-I~l~G~S~GG~la~~~a~~~~~~~~ 301 (403)
.+. +++ ++ ++|+|+||||.+|+.++...+....
T Consensus 117 ~~~---lgi--~~~~~lvG~S~GG~va~~~a~~~P~~V~ 150 (339)
T PRK07581 117 TEK---FGI--ERLALVVGWSMGAQQTYHWAVRYPDMVE 150 (339)
T ss_pred HHH---hCC--CceEEEEEeCHHHHHHHHHHHHCHHHHh
Confidence 332 355 57 5799999999999999988755443
No 80
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.13 E-value=1.7e-09 Score=107.93 Aligned_cols=194 Identities=17% Similarity=0.252 Sum_probs=122.1
Q ss_pred ecee-ecCCCceEEEEEeeCCC-----CCCCcEEEEEcCCcccCCccccc-hHHHHHHHhCCCeEEEecccCCCCCCch-
Q 015669 179 RGIV-YGDQPRNRLDLYFPKSS-----DGPKPVVAFITGGAWIIGYKAWG-SLLGQQLSERDIIVACIDYRNFPQGTIK- 250 (403)
Q Consensus 179 ~~i~-y~~~~~~~l~vy~P~~~-----~~~~PvVV~iHGGg~~~g~~~~~-~~~~~~La~~G~~Vv~~dyR~~~~~~~~- 250 (403)
++++ +.+++...+|++.+... ....|.||++||-. .|+...+ ..++..+.++||.||.+|.||.++..+.
T Consensus 95 Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGlt--g~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtT 172 (409)
T KOG1838|consen 95 REIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLT--GGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTT 172 (409)
T ss_pred eEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCC--CCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCC
Confidence 4443 44455578999987653 35679999999932 2333333 4555666677999999999997666543
Q ss_pred ------hhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCC
Q 015669 251 ------DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGY 324 (403)
Q Consensus 251 ------~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~ 324 (403)
...+|...++++++++. ...++..+|.|+||.+....+.+... ...+-+.+.+|.++
T Consensus 173 pr~f~ag~t~Dl~~~v~~i~~~~-----P~a~l~avG~S~Gg~iL~nYLGE~g~------------~~~l~~a~~v~~Pw 235 (409)
T KOG1838|consen 173 PRLFTAGWTEDLREVVNHIKKRY-----PQAPLFAVGFSMGGNILTNYLGEEGD------------NTPLIAAVAVCNPW 235 (409)
T ss_pred CceeecCCHHHHHHHHHHHHHhC-----CCCceEEEEecchHHHHHHHhhhccC------------CCCceeEEEEeccc
Confidence 35899999999998863 23589999999999999988865421 12566777777778
Q ss_pred Chh---hhhhhhhhhhhhHHHHh----hh-------hc----------CchhhhcC-------------CccccccCCCc
Q 015669 325 NLF---DLVDHFHSRGLYRSIFL----SI-------MD----------GEESLRQY-------------SPEVLVQDPNT 367 (403)
Q Consensus 325 d~~---~~~~~~~~~~~~~~~~~----~~-------~~----------~~~~~~~~-------------sp~~~~~~~~~ 367 (403)
|.. ....+...+.++...+. ++ +. ..+.++++ .-+.|...+..
T Consensus 236 d~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~ 315 (409)
T KOG1838|consen 236 DLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSS 315 (409)
T ss_pred hhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchh
Confidence 742 22222211111111100 00 00 00111111 11223344556
Q ss_pred ccccCCCCcEEEEEeCCCCCCCHH
Q 015669 368 RHAVSLLPPIILFHGTADYSIPAD 391 (403)
Q Consensus 368 ~~~~~~~pPvLIiHG~~D~vVP~~ 391 (403)
+.+.++..|+|+|+..+|+++|.+
T Consensus 316 ~~v~~I~VP~L~ina~DDPv~p~~ 339 (409)
T KOG1838|consen 316 NYVDKIKVPLLCINAADDPVVPEE 339 (409)
T ss_pred hhcccccccEEEEecCCCCCCCcc
Confidence 777888899999999999999974
No 81
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.10 E-value=1.5e-09 Score=97.24 Aligned_cols=140 Identities=17% Similarity=0.218 Sum_probs=96.6
Q ss_pred CCCCcEEEEEcCCcccCCcccc--chHHHHHHHhCCCeEEEecccCCCCC--Cch---hhHHHHHHHHHHHHHhhhhcCC
Q 015669 200 DGPKPVVAFITGGAWIIGYKAW--GSLLGQQLSERDIIVACIDYRNFPQG--TIK---DMVKDASQGISFVCNNISEYGG 272 (403)
Q Consensus 200 ~~~~PvVV~iHGGg~~~g~~~~--~~~~~~~La~~G~~Vv~~dyR~~~~~--~~~---~~~~D~~~al~~l~~~~~~~g~ 272 (403)
....|+.|.+|-.--..|++.. ...+++.|.+.||.++.+|||+-+.+ .+. ..++|+.++++|++++- -
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~h----p 100 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARH----P 100 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhC----C
Confidence 5678999999986655665543 23466778888999999999984433 332 56999999999999863 2
Q ss_pred CCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhhhhhhhhhhHHHHhhhhcCchh
Q 015669 273 DPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDHFHSRGLYRSIFLSIMDGEES 352 (403)
Q Consensus 273 d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (403)
+.....++|+|.|+++++.++... +.....+++++..+.. + .
T Consensus 101 ~s~~~~l~GfSFGa~Ia~~la~r~---------------~e~~~~is~~p~~~~~---d---------f----------- 142 (210)
T COG2945 101 DSASCWLAGFSFGAYIAMQLAMRR---------------PEILVFISILPPINAY---D---------F----------- 142 (210)
T ss_pred CchhhhhcccchHHHHHHHHHHhc---------------ccccceeeccCCCCch---h---------h-----------
Confidence 333457899999999999998765 2333344444433310 0 0
Q ss_pred hhcCCccccccCCCcccccCCCCcEEEEEeCCCCCCCHHHHHHH
Q 015669 353 LRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADARILQ 396 (403)
Q Consensus 353 ~~~~sp~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~~~S~~l 396 (403)
..+.+...|.+++||+.|++|+++...+.
T Consensus 143 ---------------s~l~P~P~~~lvi~g~~Ddvv~l~~~l~~ 171 (210)
T COG2945 143 ---------------SFLAPCPSPGLVIQGDADDVVDLVAVLKW 171 (210)
T ss_pred ---------------hhccCCCCCceeEecChhhhhcHHHHHHh
Confidence 00111124899999999999999988763
No 82
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.09 E-value=1.6e-09 Score=104.96 Aligned_cols=86 Identities=19% Similarity=0.230 Sum_probs=60.5
Q ss_pred CCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchh----hHHHHHHHHHHHHHhhhhcCCCCCcE
Q 015669 202 PKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKD----MVKDASQGISFVCNNISEYGGDPDRI 277 (403)
Q Consensus 202 ~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~----~~~D~~~al~~l~~~~~~~g~d~~rI 277 (403)
..|+|||+||.+ .+...+..+...|. ++|.|+++|+|+++.+..+. ...|..+.+.++.+. .+. +++
T Consensus 33 ~~~~iv~lHG~~---~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~ 103 (286)
T PRK03204 33 TGPPILLCHGNP---TWSFLYRDIIVALR-DRFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDH---LGL--DRY 103 (286)
T ss_pred CCCEEEEECCCC---ccHHHHHHHHHHHh-CCcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHH---hCC--CCE
Confidence 357999999943 23333455556664 46999999999987765432 245655556655543 333 689
Q ss_pred EEEEcCchHHHHHHHHHHH
Q 015669 278 YLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 278 ~l~G~S~GG~la~~~a~~~ 296 (403)
+++|||+||.++..++...
T Consensus 104 ~lvG~S~Gg~va~~~a~~~ 122 (286)
T PRK03204 104 LSMGQDWGGPISMAVAVER 122 (286)
T ss_pred EEEEECccHHHHHHHHHhC
Confidence 9999999999999888765
No 83
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.08 E-value=5.8e-10 Score=104.63 Aligned_cols=191 Identities=17% Similarity=0.174 Sum_probs=110.8
Q ss_pred eceeecCCCce--EEEEEeeCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCC---------
Q 015669 179 RGIVYGDQPRN--RLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQG--------- 247 (403)
Q Consensus 179 ~~i~y~~~~~~--~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~--------- 247 (403)
-++.|...++. ...+.+|....++.|.||.+||-+...|....+. .++..||.|+.+|.||-+.+
T Consensus 57 ydvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l----~wa~~Gyavf~MdvRGQg~~~~dt~~~p~ 132 (321)
T COG3458 57 YDVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDML----HWAVAGYAVFVMDVRGQGSSSQDTADPPG 132 (321)
T ss_pred EEEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCccccc----cccccceeEEEEecccCCCccccCCCCCC
Confidence 35666655554 4456668777789999999999322222111222 34677999999999983222
Q ss_pred --Cch-----------------hhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCc
Q 015669 248 --TIK-----------------DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTT 308 (403)
Q Consensus 248 --~~~-----------------~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~ 308 (403)
..+ ....|+..+++-+...- .+|.+||.+.|.|.||.+++.++...
T Consensus 133 ~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~---~vde~Ri~v~G~SqGGglalaaaal~------------ 197 (321)
T COG3458 133 GPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLD---EVDEERIGVTGGSQGGGLALAAAALD------------ 197 (321)
T ss_pred CCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccC---ccchhheEEeccccCchhhhhhhhcC------------
Confidence 111 12567777777665432 48999999999999999998776543
Q ss_pred ccccccceeeeeccCC-ChhhhhhhhhhhhhhHHH---Hhhhhc-Cch---hhhcCCccccccCCCcccccCCCCcEEEE
Q 015669 309 WSVSQIRAYFGLSGGY-NLFDLVDHFHSRGLYRSI---FLSIMD-GEE---SLRQYSPEVLVQDPNTRHAVSLLPPIILF 380 (403)
Q Consensus 309 ~~~~~ik~~v~isg~~-d~~~~~~~~~~~~~~~~~---~~~~~~-~~~---~~~~~sp~~~~~~~~~~~~~~~~pPvLIi 380 (403)
+.+|+.+...+++ |+...++. .....+..+ +...-. ..+ .+..+.- .+-+..++.|+|+.
T Consensus 198 ---~rik~~~~~~Pfl~df~r~i~~-~~~~~ydei~~y~k~h~~~e~~v~~TL~yfD~--------~n~A~RiK~pvL~s 265 (321)
T COG3458 198 ---PRIKAVVADYPFLSDFPRAIEL-ATEGPYDEIQTYFKRHDPKEAEVFETLSYFDI--------VNLAARIKVPVLMS 265 (321)
T ss_pred ---hhhhcccccccccccchhheee-cccCcHHHHHHHHHhcCchHHHHHHHHhhhhh--------hhHHHhhccceEEe
Confidence 3455555554433 22222221 111111111 110000 000 1111111 22234456799999
Q ss_pred EeCCCCCCCHHHHHHHHHHHhc
Q 015669 381 HGTADYSIPADARILQILFKEL 402 (403)
Q Consensus 381 HG~~D~vVP~~~S~~l~lf~~l 402 (403)
.|-.|++||+.-.-+ .|.++
T Consensus 266 vgL~D~vcpPstqFA--~yN~l 285 (321)
T COG3458 266 VGLMDPVCPPSTQFA--AYNAL 285 (321)
T ss_pred ecccCCCCCChhhHH--Hhhcc
Confidence 999999999976654 66654
No 84
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.08 E-value=1.5e-09 Score=108.95 Aligned_cols=194 Identities=17% Similarity=0.161 Sum_probs=105.1
Q ss_pred ceeecCCCceEEEEEeeCCCCCCCcEEEEEcCCcccCCccccchHH-HHHHHhCCCeEEEecccCCCCCC-ch---hhHH
Q 015669 180 GIVYGDQPRNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLL-GQQLSERDIIVACIDYRNFPQGT-IK---DMVK 254 (403)
Q Consensus 180 ~i~y~~~~~~~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~-~~~La~~G~~Vv~~dyR~~~~~~-~~---~~~~ 254 (403)
++.|.. ..+...+++|+ .+++.|+||.+-| .-+...++... .++|+.+|++++++|..+-+... ++ +.-.
T Consensus 169 ~iP~eg-~~I~g~LhlP~-~~~p~P~VIv~gG---lDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~ 243 (411)
T PF06500_consen 169 EIPFEG-KTIPGYLHLPS-GEKPYPTVIVCGG---LDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSR 243 (411)
T ss_dssp EEEETT-CEEEEEEEESS-SSS-EEEEEEE-----TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCH
T ss_pred EEeeCC-cEEEEEEEcCC-CCCCCCEEEEeCC---cchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHH
Confidence 455544 44667777887 4678898888777 44555555444 45688999999999999865542 11 1111
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCC-hhhhhhhh
Q 015669 255 DASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYN-LFDLVDHF 333 (403)
Q Consensus 255 D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d-~~~~~~~~ 333 (403)
=..+.++|+.+.. -+|.+||+++|.|+||+.|..+|... ..+++++|...++.. +..-....
T Consensus 244 l~~aVLd~L~~~p---~VD~~RV~~~G~SfGGy~AvRlA~le--------------~~RlkavV~~Ga~vh~~ft~~~~~ 306 (411)
T PF06500_consen 244 LHQAVLDYLASRP---WVDHTRVGAWGFSFGGYYAVRLAALE--------------DPRLKAVVALGAPVHHFFTDPEWQ 306 (411)
T ss_dssp HHHHHHHHHHHST---TEEEEEEEEEEETHHHHHHHHHHHHT--------------TTT-SEEEEES---SCGGH-HHHH
T ss_pred HHHHHHHHHhcCC---ccChhheEEEEeccchHHHHHHHHhc--------------ccceeeEeeeCchHhhhhccHHHH
Confidence 1246788887754 38899999999999999999988542 368999998887532 22111111
Q ss_pred hh-hhhhHHHHhhhhcCc----hh----hhcCCccccccCCCcccccCCCCcEEEEEeCCCCCCCHHHHHHHHHH
Q 015669 334 HS-RGLYRSIFLSIMDGE----ES----LRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADARILQILF 399 (403)
Q Consensus 334 ~~-~~~~~~~~~~~~~~~----~~----~~~~sp~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~~~S~~l~lf 399 (403)
.. ...+...+.+-+... +. +..++... ... -.-.+...|+|.+.|++|+++|.+.++.+..+
T Consensus 307 ~~~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~---qGl-L~~rr~~~plL~i~~~~D~v~P~eD~~lia~~ 377 (411)
T PF06500_consen 307 QRVPDMYLDVLASRLGMAAVSDESLRGELNKFSLKT---QGL-LSGRRCPTPLLAINGEDDPVSPIEDSRLIAES 377 (411)
T ss_dssp TTS-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTT---TTT-TTSS-BSS-EEEEEETT-SSS-HHHHHHHHHT
T ss_pred hcCCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcch---hcc-ccCCCCCcceEEeecCCCCCCCHHHHHHHHhc
Confidence 11 111222222222111 11 12222110 000 00122345999999999999999999975443
No 85
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.07 E-value=1.8e-09 Score=107.35 Aligned_cols=66 Identities=12% Similarity=0.020 Sum_probs=42.7
Q ss_pred HHHhCCCeEEEecccCCCCCCch-hhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHH
Q 015669 228 QLSERDIIVACIDYRNFPQGTIK-DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQA 297 (403)
Q Consensus 228 ~La~~G~~Vv~~dyR~~~~~~~~-~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~ 297 (403)
.|..++|.|+++|+||++.+.-. ....|. .+.+.+.+++.+++ +.++|+||||||.+++.++...+
T Consensus 94 ~L~~~~~~Vi~~Dl~G~g~s~~~~~~~~~~---a~dl~~ll~~l~l~-~~~~lvG~SmGG~vA~~~A~~~P 160 (343)
T PRK08775 94 ALDPARFRLLAFDFIGADGSLDVPIDTADQ---ADAIALLLDALGIA-RLHAFVGYSYGALVGLQFASRHP 160 (343)
T ss_pred ccCccccEEEEEeCCCCCCCCCCCCCHHHH---HHHHHHHHHHcCCC-cceEEEEECHHHHHHHHHHHHCh
Confidence 45445899999999987544221 112332 33333444444553 23579999999999999998763
No 86
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=99.05 E-value=2.3e-09 Score=106.46 Aligned_cols=113 Identities=18% Similarity=0.277 Sum_probs=84.0
Q ss_pred CCCcEEEEEcCCcccCCccccchHHHHHHHh--CCCeEEEecccCCC----CCCchhhHHHHHHHHHHHHHhhhhcCCCC
Q 015669 201 GPKPVVAFITGGAWIIGYKAWGSLLGQQLSE--RDIIVACIDYRNFP----QGTIKDMVKDASQGISFVCNNISEYGGDP 274 (403)
Q Consensus 201 ~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~--~G~~Vv~~dyR~~~----~~~~~~~~~D~~~al~~l~~~~~~~g~d~ 274 (403)
+.-|||||+|||||..+...........+.+ ....++.+||.+.. +..+|.++.+..+..++|.+.. | .
T Consensus 120 k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~---G--~ 194 (374)
T PF10340_consen 120 KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLPEVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESE---G--N 194 (374)
T ss_pred CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcCCCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhcc---C--C
Confidence 3469999999999998876543332222221 16799999999987 6788999999999999998531 2 3
Q ss_pred CcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChh
Q 015669 275 DRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLF 327 (403)
Q Consensus 275 ~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~ 327 (403)
++|.|+|+||||++++.++..-.. .. .....+.++.+||+.++.
T Consensus 195 ~nI~LmGDSAGGnL~Ls~LqyL~~--~~-------~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 195 KNIILMGDSAGGNLALSFLQYLKK--PN-------KLPYPKSAILISPWVNLV 238 (374)
T ss_pred CeEEEEecCccHHHHHHHHHHHhh--cC-------CCCCCceeEEECCCcCCc
Confidence 799999999999999987765321 11 112457899999998876
No 87
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.04 E-value=1.1e-09 Score=104.20 Aligned_cols=107 Identities=26% Similarity=0.351 Sum_probs=75.0
Q ss_pred eEEEEEeeCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhC-CCeEEEec-ccCC--CCCC--c------hhhHHHH
Q 015669 189 NRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSER-DIIVACID-YRNF--PQGT--I------KDMVKDA 256 (403)
Q Consensus 189 ~~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~-G~~Vv~~d-yR~~--~~~~--~------~~~~~D~ 256 (403)
....+|.|....++.|+||.+||++... .......--+.||++ ||.|+.+| |... +.+. + ...++|+
T Consensus 47 r~y~l~vP~g~~~~apLvv~LHG~~~sg-ag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddV 125 (312)
T COG3509 47 RSYRLYVPPGLPSGAPLVVVLHGSGGSG-AGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDV 125 (312)
T ss_pred cceEEEcCCCCCCCCCEEEEEecCCCCh-HHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCCccHH
Confidence 5688999998777779999999965321 111111122566766 99999995 3221 1111 1 2346666
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHH
Q 015669 257 SQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 257 ~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
-...+-+.+...+|++||.||+|.|.|.||.++..++...
T Consensus 126 gflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~ 165 (312)
T COG3509 126 GFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEY 165 (312)
T ss_pred HHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcC
Confidence 6666666666778999999999999999999999998775
No 88
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.04 E-value=5.7e-09 Score=101.01 Aligned_cols=103 Identities=17% Similarity=0.185 Sum_probs=74.8
Q ss_pred EEEEeeCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchhh-----HHHHHHHHHHHHH
Q 015669 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDM-----VKDASQGISFVCN 265 (403)
Q Consensus 191 l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~~-----~~D~~~al~~l~~ 265 (403)
+++.+.+...+..|+|+++|| .-.....+......|+.+||.|+++|.||++.+.-|.. +..+..-+..+.+
T Consensus 32 I~~h~~e~g~~~gP~illlHG---fPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld 108 (322)
T KOG4178|consen 32 IRLHYVEGGPGDGPIVLLLHG---FPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLD 108 (322)
T ss_pred EEEEEEeecCCCCCEEEEEcc---CCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHH
Confidence 677777777778899999999 44444455667788999999999999999988766533 1222222222222
Q ss_pred hhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhc
Q 015669 266 NISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKET 301 (403)
Q Consensus 266 ~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~ 301 (403)
+ .| -++++++||.+||.+|+.+++..+.+..
T Consensus 109 ~---Lg--~~k~~lvgHDwGaivaw~la~~~Perv~ 139 (322)
T KOG4178|consen 109 H---LG--LKKAFLVGHDWGAIVAWRLALFYPERVD 139 (322)
T ss_pred H---hc--cceeEEEeccchhHHHHHHHHhChhhcc
Confidence 2 23 3799999999999999999998765544
No 89
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.03 E-value=6e-09 Score=105.28 Aligned_cols=100 Identities=15% Similarity=0.060 Sum_probs=66.3
Q ss_pred EEEEeeCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchhh----HHHHHHHHHHHHHh
Q 015669 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDM----VKDASQGISFVCNN 266 (403)
Q Consensus 191 l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~~----~~D~~~al~~l~~~ 266 (403)
+++++-+......|+||++||.+ ++...+..+...|+ ++|.|+++|+|+++.+..+.. ..+.....+++.+.
T Consensus 115 ~~~~y~~~G~~~~~~ivllHG~~---~~~~~w~~~~~~L~-~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~ 190 (383)
T PLN03084 115 FRWFCVESGSNNNPPVLLIHGFP---SQAYSYRKVLPVLS-KNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESL 190 (383)
T ss_pred eEEEEEecCCCCCCeEEEECCCC---CCHHHHHHHHHHHh-cCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHH
Confidence 44444444334568999999943 34444556667775 489999999999876554321 12333344455554
Q ss_pred hhhcCCCCCcEEEEEcCchHHHHHHHHHHH
Q 015669 267 ISEYGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 267 ~~~~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
+.+.++ +++.|+|+|+||.+++.++...
T Consensus 191 i~~l~~--~~~~LvG~s~GG~ia~~~a~~~ 218 (383)
T PLN03084 191 IDELKS--DKVSLVVQGYFSPPVVKYASAH 218 (383)
T ss_pred HHHhCC--CCceEEEECHHHHHHHHHHHhC
Confidence 554444 5899999999999998888765
No 90
>PRK05855 short chain dehydrogenase; Validated
Probab=98.99 E-value=3.6e-09 Score=111.49 Aligned_cols=90 Identities=12% Similarity=0.065 Sum_probs=57.0
Q ss_pred CCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchh--hHHHHHHHHHHHHHhhhhcCCCCCcEE
Q 015669 201 GPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKD--MVKDASQGISFVCNNISEYGGDPDRIY 278 (403)
Q Consensus 201 ~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~--~~~D~~~al~~l~~~~~~~g~d~~rI~ 278 (403)
...|+|||+||. .++...+..+...| .+||.|+++|+|+++.+..+. ...+.....+.+.+.++..+.+ .++.
T Consensus 23 ~~~~~ivllHG~---~~~~~~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l~~~-~~~~ 97 (582)
T PRK05855 23 PDRPTVVLVHGY---PDNHEVWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAVSPD-RPVH 97 (582)
T ss_pred CCCCeEEEEcCC---CchHHHHHHHHHHh-hcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHhCCC-CcEE
Confidence 346899999994 34444555666777 568999999999987764321 1111222233333333333332 3599
Q ss_pred EEEcCchHHHHHHHHHH
Q 015669 279 LMGQSAGAHIAACTLLE 295 (403)
Q Consensus 279 l~G~S~GG~la~~~a~~ 295 (403)
|+|||+||.+++.++..
T Consensus 98 lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 98 LLAHDWGSIQGWEAVTR 114 (582)
T ss_pred EEecChHHHHHHHHHhC
Confidence 99999999888766544
No 91
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.98 E-value=3.3e-09 Score=99.24 Aligned_cols=107 Identities=22% Similarity=0.316 Sum_probs=83.8
Q ss_pred CceEEEEEeeCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchhhHHHHHHHHHHHHHh
Q 015669 187 PRNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNN 266 (403)
Q Consensus 187 ~~~~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~ 266 (403)
+-..+-|+.|.. .+.+|||+|+|| ..-..+++..+...+++.||+||+++.-..-.-...+.+++....++|+.+.
T Consensus 31 pPkpLlI~tP~~-~G~yPVilF~HG---~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~p~~~~Ei~~aa~V~~WL~~g 106 (307)
T PF07224_consen 31 PPKPLLIVTPSE-AGTYPVILFLHG---FNLYNSFYSQLLAHIASHGFIVVAPQLYTLFPPDGQDEIKSAASVINWLPEG 106 (307)
T ss_pred CCCCeEEecCCc-CCCccEEEEeec---hhhhhHHHHHHHHHHhhcCeEEEechhhcccCCCchHHHHHHHHHHHHHHhh
Confidence 346788999965 678999999999 3344567788889999999999999954321123345678889999999988
Q ss_pred hhhc-----CCCCCcEEEEEcCchHHHHHHHHHHHH
Q 015669 267 ISEY-----GGDPDRIYLMGQSAGAHIAACTLLEQA 297 (403)
Q Consensus 267 ~~~~-----g~d~~rI~l~G~S~GG~la~~~a~~~~ 297 (403)
+..+ ..+..++.++|||.||..|..+|+..+
T Consensus 107 L~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a 142 (307)
T PF07224_consen 107 LQHVLPENVEANLSKLALSGHSRGGKTAFALALGYA 142 (307)
T ss_pred hhhhCCCCcccccceEEEeecCCccHHHHHHHhccc
Confidence 6654 356789999999999999999988653
No 92
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=98.96 E-value=9.5e-09 Score=93.55 Aligned_cols=172 Identities=15% Similarity=0.145 Sum_probs=106.1
Q ss_pred CCCcEEEEEcCCcccCCccc--cchHHHHHHHhCCCeEEEecccCCCCCCc-------hhhHHHHHHHHHHHHHhhhhcC
Q 015669 201 GPKPVVAFITGGAWIIGYKA--WGSLLGQQLSERDIIVACIDYRNFPQGTI-------KDMVKDASQGISFVCNNISEYG 271 (403)
Q Consensus 201 ~~~PvVV~iHGGg~~~g~~~--~~~~~~~~La~~G~~Vv~~dyR~~~~~~~-------~~~~~D~~~al~~l~~~~~~~g 271 (403)
+..-++|++|| ...++. .+..++..|++.|+.++.+|+++.+++.. ....+|+...++++.+
T Consensus 31 gs~e~vvlcHG---frS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~------ 101 (269)
T KOG4667|consen 31 GSTEIVVLCHG---FRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSN------ 101 (269)
T ss_pred CCceEEEEeec---cccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhcc------
Confidence 34569999999 444443 35678889999999999999999665432 2345787777777754
Q ss_pred CCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhhhhhhhhhhHHHHhhhhcCc-
Q 015669 272 GDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDHFHSRGLYRSIFLSIMDGE- 350 (403)
Q Consensus 272 ~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~~~~~~~~~~~~~~~~~~~~- 350 (403)
.+..--+++|||-||.+++..+... ..+..++-++|-||....+..--......+....-+.+.
T Consensus 102 ~nr~v~vi~gHSkGg~Vvl~ya~K~---------------~d~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid~~ 166 (269)
T KOG4667|consen 102 SNRVVPVILGHSKGGDVVLLYASKY---------------HDIRNVINCSGRYDLKNGINERLGEDYLERIKEQGFIDVG 166 (269)
T ss_pred CceEEEEEEeecCccHHHHHHHHhh---------------cCchheEEcccccchhcchhhhhcccHHHHHHhCCceecC
Confidence 1112236799999999999887654 246778888998988877642222222222211111100
Q ss_pred ----hhhhcCCcc---ccccCCCcccc--cCCCCcEEEEEeCCCCCCCHHHHHHH
Q 015669 351 ----ESLRQYSPE---VLVQDPNTRHA--VSLLPPIILFHGTADYSIPADARILQ 396 (403)
Q Consensus 351 ----~~~~~~sp~---~~~~~~~~~~~--~~~~pPvLIiHG~~D~vVP~~~S~~l 396 (403)
+.-..+.++ ..+........ .+..+|+|-+||..|.+||.+.+.++
T Consensus 167 ~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~Akef 221 (269)
T KOG4667|consen 167 PRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEF 221 (269)
T ss_pred cccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHH
Confidence 000011111 11111110111 34467999999999999999999974
No 93
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.95 E-value=6.9e-09 Score=97.84 Aligned_cols=102 Identities=22% Similarity=0.344 Sum_probs=77.1
Q ss_pred CCceEEEEEeeCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhC-CCeEEEecccCCCCCCch--------hhHHHH
Q 015669 186 QPRNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSER-DIIVACIDYRNFPQGTIK--------DMVKDA 256 (403)
Q Consensus 186 ~~~~~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~-G~~Vv~~dyR~~~~~~~~--------~~~~D~ 256 (403)
+..+.+++|+--......|++++.||||. +.-.+..+++.+..+ ...|+++|.|+.++.... .+..|.
T Consensus 57 ~~~~t~n~Y~t~~~~t~gpil~l~HG~G~---S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~ 133 (343)
T KOG2564|consen 57 GSDLTFNVYLTLPSATEGPILLLLHGGGS---SALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDF 133 (343)
T ss_pred CCcceEEEEEecCCCCCccEEEEeecCcc---cchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHH
Confidence 33357899986655667899999999876 444667788888877 888999999999888764 235555
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHH
Q 015669 257 SQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 257 ~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
.+.++.+ ||-++.+|+|+||||||.+|...+...
T Consensus 134 ~~~i~~~------fge~~~~iilVGHSmGGaIav~~a~~k 167 (343)
T KOG2564|consen 134 GAVIKEL------FGELPPQIILVGHSMGGAIAVHTAASK 167 (343)
T ss_pred HHHHHHH------hccCCCceEEEeccccchhhhhhhhhh
Confidence 5444443 345567999999999999998877654
No 94
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.94 E-value=9.5e-09 Score=102.43 Aligned_cols=88 Identities=15% Similarity=0.152 Sum_probs=55.1
Q ss_pred CCcEEEEEcCCcccCCccc-----------cchHH---HHHHHhCCCeEEEecccC--CCCCCc---------------h
Q 015669 202 PKPVVAFITGGAWIIGYKA-----------WGSLL---GQQLSERDIIVACIDYRN--FPQGTI---------------K 250 (403)
Q Consensus 202 ~~PvVV~iHGGg~~~g~~~-----------~~~~~---~~~La~~G~~Vv~~dyR~--~~~~~~---------------~ 250 (403)
..|+||++||- .++.. ++..+ +..|..++|.|+++|+|| ++.... +
T Consensus 30 ~~~~vll~Hg~---~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~ 106 (351)
T TIGR01392 30 RSNAVLVCHAL---TGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPL 106 (351)
T ss_pred CCCEEEEcCCc---CcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCC
Confidence 35799999993 33221 22222 135556799999999999 222111 1
Q ss_pred hhHHHHHHHHHHHHHhhhhcCCCCCc-EEEEEcCchHHHHHHHHHHHH
Q 015669 251 DMVKDASQGISFVCNNISEYGGDPDR-IYLMGQSAGAHIAACTLLEQA 297 (403)
Q Consensus 251 ~~~~D~~~al~~l~~~~~~~g~d~~r-I~l~G~S~GG~la~~~a~~~~ 297 (403)
..+.|.. +++.+.++++++ ++ ++|+||||||.+++.++...+
T Consensus 107 ~~~~~~~---~~~~~~~~~l~~--~~~~~l~G~S~Gg~ia~~~a~~~p 149 (351)
T TIGR01392 107 ITIRDDV---KAQKLLLDHLGI--EQIAAVVGGSMGGMQALEWAIDYP 149 (351)
T ss_pred CcHHHHH---HHHHHHHHHcCC--CCceEEEEECHHHHHHHHHHHHCh
Confidence 1234443 333333444555 46 999999999999999988764
No 95
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=98.93 E-value=1.6e-09 Score=110.25 Aligned_cols=106 Identities=17% Similarity=0.305 Sum_probs=90.5
Q ss_pred EEEEEeeCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhC-CCeEEEecccCCCCCCchhhHHHHHHHHHHHHHhhh
Q 015669 190 RLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSER-DIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNIS 268 (403)
Q Consensus 190 ~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~-G~~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~~ 268 (403)
.+++|.+.. ...+-.|+.+|||||+.-+...+....+.+++. |..|+++||-++|+.++|..++++..|..|+.+|.+
T Consensus 384 ~~~~wh~P~-p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaPFPRaleEv~fAYcW~inn~a 462 (880)
T KOG4388|consen 384 SLELWHRPA-PRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEAPFPRALEEVFFAYCWAINNCA 462 (880)
T ss_pred ccccCCCCC-CCCceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCCCCCcHHHHHHHHHHHHhcCHH
Confidence 345554432 223458999999999998888777777777777 999999999999999999999999999999999999
Q ss_pred hcCCCCCcEEEEEcCchHHHHHHHHHHH
Q 015669 269 EYGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 269 ~~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
..|..-+||+++|+|+||.+....++..
T Consensus 463 llG~TgEriv~aGDSAGgNL~~~VaLr~ 490 (880)
T KOG4388|consen 463 LLGSTGERIVLAGDSAGGNLCFTVALRA 490 (880)
T ss_pred HhCcccceEEEeccCCCcceeehhHHHH
Confidence 9998889999999999999988777654
No 96
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.90 E-value=1.2e-07 Score=99.25 Aligned_cols=104 Identities=18% Similarity=0.228 Sum_probs=70.3
Q ss_pred ceeecCCCceEEEEEeeCCCCCCCcEEEEEcCCcccCCcc----ccchHHHHHHHhCCCeEEEecccCCCCCC----chh
Q 015669 180 GIVYGDQPRNRLDLYFPKSSDGPKPVVAFITGGAWIIGYK----AWGSLLGQQLSERDIIVACIDYRNFPQGT----IKD 251 (403)
Q Consensus 180 ~i~y~~~~~~~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~----~~~~~~~~~La~~G~~Vv~~dyR~~~~~~----~~~ 251 (403)
+++|. ++...+.-|.|.++...++.||++|| +....- .....+.++|+++||.|+++|+|+.+... +.+
T Consensus 166 ~VV~~-~~~~eLi~Y~P~t~~~~~~PlLiVp~--~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~dd 242 (532)
T TIGR01838 166 AVVFE-NELFQLIQYEPTTETVHKTPLLIVPP--WINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDD 242 (532)
T ss_pred eEEEE-CCcEEEEEeCCCCCcCCCCcEEEECc--ccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhh
Confidence 45553 33456777778765556678999999 221111 11246889999999999999999865432 222
Q ss_pred h-HHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHH
Q 015669 252 M-VKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAAC 291 (403)
Q Consensus 252 ~-~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~ 291 (403)
. .+++.++++.+.+.. +.+++.++|||+||.+++.
T Consensus 243 Y~~~~i~~al~~v~~~~-----g~~kv~lvG~cmGGtl~a~ 278 (532)
T TIGR01838 243 YIRDGVIAALEVVEAIT-----GEKQVNCVGYCIGGTLLST 278 (532)
T ss_pred hHHHHHHHHHHHHHHhc-----CCCCeEEEEECcCcHHHHH
Confidence 2 244667777776542 3468999999999999755
No 97
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.88 E-value=1.6e-08 Score=97.68 Aligned_cols=105 Identities=21% Similarity=0.322 Sum_probs=68.1
Q ss_pred CCCCcEEEEEcCCcccCCc-cccchHHHHHHHh-CCCeEEEecccCCCCCCchhhH-------HHHHHHHHHHHHhhhhc
Q 015669 200 DGPKPVVAFITGGAWIIGY-KAWGSLLGQQLSE-RDIIVACIDYRNFPQGTIKDMV-------KDASQGISFVCNNISEY 270 (403)
Q Consensus 200 ~~~~PvVV~iHGGg~~~g~-~~~~~~~~~~La~-~G~~Vv~~dyR~~~~~~~~~~~-------~D~~~al~~l~~~~~~~ 270 (403)
+..+|++|++|| |.... ..+...+...+.+ .++.|+++||++......+... .++...++++. +..
T Consensus 33 ~~~~p~vilIHG--~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~---~~~ 107 (275)
T cd00707 33 NPSRPTRFIIHG--WTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLV---DNT 107 (275)
T ss_pred CCCCCcEEEEcC--CCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHH---Hhc
Confidence 446789999999 43332 2344445554544 5899999999986443333222 23333444443 334
Q ss_pred CCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccC
Q 015669 271 GGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGG 323 (403)
Q Consensus 271 g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~ 323 (403)
+.+.++|+|+|||+||++|..++... +.+++.++++.+.
T Consensus 108 g~~~~~i~lIGhSlGa~vAg~~a~~~--------------~~~v~~iv~LDPa 146 (275)
T cd00707 108 GLSLENVHLIGHSLGAHVAGFAGKRL--------------NGKLGRITGLDPA 146 (275)
T ss_pred CCChHHEEEEEecHHHHHHHHHHHHh--------------cCccceeEEecCC
Confidence 66778999999999999999887654 2356677766543
No 98
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.84 E-value=3.4e-08 Score=99.64 Aligned_cols=91 Identities=14% Similarity=0.051 Sum_probs=54.1
Q ss_pred CCcEEEEEcCCcccCCcccc-------------chHHH---HHHHhCCCeEEEecccCCCC-CCch-----h--------
Q 015669 202 PKPVVAFITGGAWIIGYKAW-------------GSLLG---QQLSERDIIVACIDYRNFPQ-GTIK-----D-------- 251 (403)
Q Consensus 202 ~~PvVV~iHGGg~~~g~~~~-------------~~~~~---~~La~~G~~Vv~~dyR~~~~-~~~~-----~-------- 251 (403)
..|.||++||.+ ++... +..+. ..|...+|.|+++|++++.+ ...+ .
T Consensus 47 ~~p~vvl~HG~~---~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~ 123 (379)
T PRK00175 47 RSNAVLICHALT---GDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSD 123 (379)
T ss_pred CCCEEEEeCCcC---CchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCC
Confidence 368999999943 33321 22221 13335689999999998321 1110 0
Q ss_pred -hHHHHHHHHHHHHHhhhhcCCCCCc-EEEEEcCchHHHHHHHHHHHH
Q 015669 252 -MVKDASQGISFVCNNISEYGGDPDR-IYLMGQSAGAHIAACTLLEQA 297 (403)
Q Consensus 252 -~~~D~~~al~~l~~~~~~~g~d~~r-I~l~G~S~GG~la~~~a~~~~ 297 (403)
.........+++.+.++++++ ++ +.|+|+||||.+++.++...+
T Consensus 124 ~~~~~~~~~~~~~~~~l~~l~~--~~~~~lvG~S~Gg~ia~~~a~~~p 169 (379)
T PRK00175 124 FPVITIRDWVRAQARLLDALGI--TRLAAVVGGSMGGMQALEWAIDYP 169 (379)
T ss_pred CCcCCHHHHHHHHHHHHHHhCC--CCceEEEEECHHHHHHHHHHHhCh
Confidence 011222334444444555555 46 589999999999999988753
No 99
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.82 E-value=9.6e-08 Score=112.26 Aligned_cols=89 Identities=21% Similarity=0.212 Sum_probs=60.0
Q ss_pred CCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchh--------hHHHHHHHHHHHHHhhhhcCCC
Q 015669 202 PKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKD--------MVKDASQGISFVCNNISEYGGD 273 (403)
Q Consensus 202 ~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~--------~~~D~~~al~~l~~~~~~~g~d 273 (403)
..|+|||+||. .++...+..+...|. .+|.|+++|+|+++....+. ...+.....+++.+.++..+
T Consensus 1370 ~~~~vVllHG~---~~s~~~w~~~~~~L~-~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~-- 1443 (1655)
T PLN02980 1370 EGSVVLFLHGF---LGTGEDWIPIMKAIS-GSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHIT-- 1443 (1655)
T ss_pred CCCeEEEECCC---CCCHHHHHHHHHHHh-CCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhC--
Confidence 46899999993 344445566667775 46999999999987654321 11122233334444344333
Q ss_pred CCcEEEEEcCchHHHHHHHHHHH
Q 015669 274 PDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 274 ~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
.++++|+||||||.+++.++...
T Consensus 1444 ~~~v~LvGhSmGG~iAl~~A~~~ 1466 (1655)
T PLN02980 1444 PGKVTLVGYSMGARIALYMALRF 1466 (1655)
T ss_pred CCCEEEEEECHHHHHHHHHHHhC
Confidence 46999999999999999988765
No 100
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.77 E-value=1.8e-08 Score=103.68 Aligned_cols=194 Identities=13% Similarity=0.113 Sum_probs=130.4
Q ss_pred eeceeecCCCceEEEEEee-CC-CCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCC--ch---
Q 015669 178 RRGIVYGDQPRNRLDLYFP-KS-SDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGT--IK--- 250 (403)
Q Consensus 178 ~~~i~y~~~~~~~l~vy~P-~~-~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~--~~--- 250 (403)
.+.....+.|+.++..|+- ++ +..+.|++|+-.||.-+.-........ ..+.++|.+.|..|-||+++.. |.
T Consensus 394 veQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~-~~WLerGg~~v~ANIRGGGEfGp~WH~Aa 472 (648)
T COG1505 394 VEQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSR-KLWLERGGVFVLANIRGGGEFGPEWHQAG 472 (648)
T ss_pred EEEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhh-HHHHhcCCeEEEEecccCCccCHHHHHHH
Confidence 3445556677776666665 33 233789999999986555555444444 6677899999999999976543 11
Q ss_pred ------hhHHHHHHHHHHHHHhhhhcCC-CCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccC
Q 015669 251 ------DMVKDASQGISFVCNNISEYGG-DPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGG 323 (403)
Q Consensus 251 ------~~~~D~~~al~~l~~~~~~~g~-d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~ 323 (403)
...+|..+++++|.++ |+ .|+++.+.|.|.||.++..++.++ ++.+.+++...|.
T Consensus 473 ~k~nrq~vfdDf~AVaedLi~r----gitspe~lgi~GgSNGGLLvg~alTQr--------------PelfgA~v~evPl 534 (648)
T COG1505 473 MKENKQNVFDDFIAVAEDLIKR----GITSPEKLGIQGGSNGGLLVGAALTQR--------------PELFGAAVCEVPL 534 (648)
T ss_pred hhhcchhhhHHHHHHHHHHHHh----CCCCHHHhhhccCCCCceEEEeeeccC--------------hhhhCceeeccch
Confidence 2378999999998876 54 589999999999999998766654 4556666666665
Q ss_pred CChhhhhhhhhhhhhhHHHHhhhh-----cCchhhhcCCccccccCCCcccccCCCCcEEEEEeCCCCCCCHHHHHHHHH
Q 015669 324 YNLFDLVDHFHSRGLYRSIFLSIM-----DGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADARILQIL 398 (403)
Q Consensus 324 ~d~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~sp~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~~~S~~l~l 398 (403)
.|+.+.-....- .+++.++- +....+.+++|...++.. ...||+||-.++.|+.|.+.++++ +
T Consensus 535 lDMlRYh~l~aG----~sW~~EYG~Pd~P~d~~~l~~YSPy~nl~~g------~kYP~~LITTs~~DDRVHPaHarK--f 602 (648)
T COG1505 535 LDMLRYHLLTAG----SSWIAEYGNPDDPEDRAFLLAYSPYHNLKPG------QKYPPTLITTSLHDDRVHPAHARK--F 602 (648)
T ss_pred hhhhhhcccccc----hhhHhhcCCCCCHHHHHHHHhcCchhcCCcc------ccCCCeEEEcccccccccchHHHH--H
Confidence 555443222111 12222111 112346677887666542 235799999999999999999998 5
Q ss_pred HHhc
Q 015669 399 FKEL 402 (403)
Q Consensus 399 f~~l 402 (403)
+.+|
T Consensus 603 aa~L 606 (648)
T COG1505 603 AAKL 606 (648)
T ss_pred HHHH
Confidence 5444
No 101
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.76 E-value=5e-08 Score=96.49 Aligned_cols=91 Identities=16% Similarity=0.121 Sum_probs=61.3
Q ss_pred CCCcEEEEEcCCcccCCccccchHHHHHHHhC-CCeEEEecccCCC-CCCch-hhHHHHHHHHHHHHHhhhhcCCCCCcE
Q 015669 201 GPKPVVAFITGGAWIIGYKAWGSLLGQQLSER-DIIVACIDYRNFP-QGTIK-DMVKDASQGISFVCNNISEYGGDPDRI 277 (403)
Q Consensus 201 ~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~-G~~Vv~~dyR~~~-~~~~~-~~~~D~~~al~~l~~~~~~~g~d~~rI 277 (403)
...|.||++|| |.. +...+......|.+. |+.|+++|.-|.+ .+..+ ....++..-+.-+.....+++.. ++
T Consensus 56 ~~~~pvlllHG--F~~-~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~--~~ 130 (326)
T KOG1454|consen 56 KDKPPVLLLHG--FGA-SSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVE--PV 130 (326)
T ss_pred CCCCcEEEecc--ccC-CcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCc--ce
Confidence 46789999999 444 555555666666665 7999999998855 33333 22233333344444444444443 59
Q ss_pred EEEEcCchHHHHHHHHHHH
Q 015669 278 YLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 278 ~l~G~S~GG~la~~~a~~~ 296 (403)
.++|||+||.+|..+|...
T Consensus 131 ~lvghS~Gg~va~~~Aa~~ 149 (326)
T KOG1454|consen 131 SLVGHSLGGIVALKAAAYY 149 (326)
T ss_pred EEEEeCcHHHHHHHHHHhC
Confidence 9999999999999998765
No 102
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.70 E-value=3.4e-07 Score=103.31 Aligned_cols=107 Identities=21% Similarity=0.157 Sum_probs=64.5
Q ss_pred eceeecCCCceEEEEEeeCCC----CCCCcEEEEEcCCcccCCccccch-----HHHHHHHhCCCeEEEecccCCCCC--
Q 015669 179 RGIVYGDQPRNRLDLYFPKSS----DGPKPVVAFITGGAWIIGYKAWGS-----LLGQQLSERDIIVACIDYRNFPQG-- 247 (403)
Q Consensus 179 ~~i~y~~~~~~~l~vy~P~~~----~~~~PvVV~iHGGg~~~g~~~~~~-----~~~~~La~~G~~Vv~~dyR~~~~~-- 247 (403)
.+++|.. +...+.-|.|.+. ....|.||++|| | ..+...+. .+..+|+++||.|+++|+......
T Consensus 40 ~~vv~~~-~~~~l~~y~~~~~~~~~~~~~~plllvhg--~-~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~G~~~~~~~ 115 (994)
T PRK07868 40 FQIVESV-PMYRLRRYFPPDNRPGQPPVGPPVLMVHP--M-MMSADMWDVTRDDGAVGILHRAGLDPWVIDFGSPDKVEG 115 (994)
T ss_pred CcEEEEc-CcEEEEEeCCCCccccccCCCCcEEEECC--C-CCCccceecCCcccHHHHHHHCCCEEEEEcCCCCChhHc
Confidence 4455533 3456777877653 235689999999 2 22222222 246889999999999998532211
Q ss_pred Cc----hhhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHH
Q 015669 248 TI----KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLE 295 (403)
Q Consensus 248 ~~----~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~ 295 (403)
.. .+.+.++.++++.+++. ++ +++.++|+|+||.+++.++..
T Consensus 116 ~~~~~l~~~i~~l~~~l~~v~~~----~~--~~v~lvG~s~GG~~a~~~aa~ 161 (994)
T PRK07868 116 GMERNLADHVVALSEAIDTVKDV----TG--RDVHLVGYSQGGMFCYQAAAY 161 (994)
T ss_pred CccCCHHHHHHHHHHHHHHHHHh----hC--CceEEEEEChhHHHHHHHHHh
Confidence 11 11122223333333322 33 479999999999999887753
No 103
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.61 E-value=6.7e-07 Score=81.48 Aligned_cols=150 Identities=15% Similarity=0.217 Sum_probs=78.2
Q ss_pred EEEEcCCcccCCccc-cchHHHHHHHhCC--CeEEEecccCCCCCCchhhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEc
Q 015669 206 VAFITGGAWIIGYKA-WGSLLGQQLSERD--IIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQ 282 (403)
Q Consensus 206 VV~iHGGg~~~g~~~-~~~~~~~~La~~G--~~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~ 282 (403)
|+|+|| |.++..+ ....+.+++++.+ ..+.++|+... ..+ +++.+.+.+++. .++.+.|+|.
T Consensus 2 ilYlHG--F~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~~--------p~~---a~~~l~~~i~~~--~~~~~~liGS 66 (187)
T PF05728_consen 2 ILYLHG--FNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPPF--------PEE---AIAQLEQLIEEL--KPENVVLIGS 66 (187)
T ss_pred eEEecC--CCCCCCCHHHHHHHHHHHHhCCCceEECCCCCcC--------HHH---HHHHHHHHHHhC--CCCCeEEEEE
Confidence 799999 4333222 2344566777664 45555554322 122 333344444433 3345999999
Q ss_pred CchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhhhhhhhhhhHHHHhhhhcCchhhhcCCccccc
Q 015669 283 SAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDHFHSRGLYRSIFLSIMDGEESLRQYSPEVLV 362 (403)
Q Consensus 283 S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~ 362 (403)
|+||..|..++... .+++ |.+.+.+........+....... ..+ ....+......
T Consensus 67 SlGG~~A~~La~~~----------------~~~a-vLiNPav~p~~~l~~~iG~~~~~------~~~--e~~~~~~~~~~ 121 (187)
T PF05728_consen 67 SLGGFYATYLAERY----------------GLPA-VLINPAVRPYELLQDYIGEQTNP------YTG--ESYELTEEHIE 121 (187)
T ss_pred ChHHHHHHHHHHHh----------------CCCE-EEEcCCCCHHHHHHHhhCccccC------CCC--ccceechHhhh
Confidence 99999999887554 3444 66677666554333221110000 000 00001111111
Q ss_pred cCCCcccc-cCCCCcEEEEEeCCCCCCCHHHHHH
Q 015669 363 QDPNTRHA-VSLLPPIILFHGTADYSIPADARIL 395 (403)
Q Consensus 363 ~~~~~~~~-~~~~pPvLIiHG~~D~vVP~~~S~~ 395 (403)
....+... .....++++++|+.|.+++++.+.+
T Consensus 122 ~l~~l~~~~~~~~~~~lvll~~~DEvLd~~~a~~ 155 (187)
T PF05728_consen 122 ELKALEVPYPTNPERYLVLLQTGDEVLDYREAVA 155 (187)
T ss_pred hcceEeccccCCCccEEEEEecCCcccCHHHHHH
Confidence 10111110 1122389999999999999988765
No 104
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.58 E-value=2.2e-06 Score=81.66 Aligned_cols=93 Identities=19% Similarity=0.188 Sum_probs=74.5
Q ss_pred CCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchh-hHHHHHHHHHHHHHhhhhcCCCCCcEE
Q 015669 200 DGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKD-MVKDASQGISFVCNNISEYGGDPDRIY 278 (403)
Q Consensus 200 ~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~-~~~D~~~al~~l~~~~~~~g~d~~rI~ 278 (403)
..+..+||-+|| .-|+..++.++...|.+.|++|+.+||.|++....+. ....-..-..|+.+.+++.+++ +++.
T Consensus 32 gs~~gTVv~~hG---sPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~-~~~i 107 (297)
T PF06342_consen 32 GSPLGTVVAFHG---SPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIK-GKLI 107 (297)
T ss_pred CCCceeEEEecC---CCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCC-CceE
Confidence 345669999999 7889999999999999999999999999987665432 2223334456777777777887 8999
Q ss_pred EEEcCchHHHHHHHHHHH
Q 015669 279 LMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 279 l~G~S~GG~la~~~a~~~ 296 (403)
.+|||.|+-.|+.++...
T Consensus 108 ~~gHSrGcenal~la~~~ 125 (297)
T PF06342_consen 108 FLGHSRGCENALQLAVTH 125 (297)
T ss_pred EEEeccchHHHHHHHhcC
Confidence 999999999999988764
No 105
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.54 E-value=3.2e-07 Score=92.60 Aligned_cols=106 Identities=25% Similarity=0.284 Sum_probs=63.9
Q ss_pred CCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCC--------C-----C-------------ch----
Q 015669 201 GPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQ--------G-----T-------------IK---- 250 (403)
Q Consensus 201 ~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~--------~-----~-------------~~---- 250 (403)
++.|||||-|| ..|++..+..++..||++||+|+++|+|-+.. . . +.
T Consensus 98 ~~~PvvIFSHG---lgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T PF03403_consen 98 GKFPVVIFSHG---LGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDP 174 (379)
T ss_dssp S-EEEEEEE-----TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----G
T ss_pred CCCCEEEEeCC---CCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccc
Confidence 67999999999 67788889999999999999999999995210 0 0 00
Q ss_pred -h-----------hHHHHHHHHHHHHHhh---------------hhc--CCCCCcEEEEEcCchHHHHHHHHHHHHHHhc
Q 015669 251 -D-----------MVKDASQGISFVCNNI---------------SEY--GGDPDRIYLMGQSAGAHIAACTLLEQAIKET 301 (403)
Q Consensus 251 -~-----------~~~D~~~al~~l~~~~---------------~~~--g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~ 301 (403)
. -..|+..+++.+.+.- ..| .+|.++|+++|||.||..++.++...
T Consensus 175 ~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d----- 249 (379)
T PF03403_consen 175 EEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD----- 249 (379)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH------
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-----
Confidence 0 0345556666654311 112 25678999999999999999877654
Q ss_pred CCCCCCcccccccceeeeeccCC
Q 015669 302 GEGESTTWSVSQIRAYFGLSGGY 324 (403)
Q Consensus 302 ~~~~~~~~~~~~ik~~v~isg~~ 324 (403)
..+++.|.+.++.
T Consensus 250 ----------~r~~~~I~LD~W~ 262 (379)
T PF03403_consen 250 ----------TRFKAGILLDPWM 262 (379)
T ss_dssp ----------TT--EEEEES---
T ss_pred ----------cCcceEEEeCCcc
Confidence 4677777776654
No 106
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.52 E-value=7.1e-07 Score=91.22 Aligned_cols=90 Identities=23% Similarity=0.332 Sum_probs=59.1
Q ss_pred CCCcEEEEEcCCcccC-Cc-cccchHHHHHHHh--CCCeEEEecccCCCCCCchhh-------HHHHHHHHHHHHHhhhh
Q 015669 201 GPKPVVAFITGGAWII-GY-KAWGSLLGQQLSE--RDIIVACIDYRNFPQGTIKDM-------VKDASQGISFVCNNISE 269 (403)
Q Consensus 201 ~~~PvVV~iHGGg~~~-g~-~~~~~~~~~~La~--~G~~Vv~~dyR~~~~~~~~~~-------~~D~~~al~~l~~~~~~ 269 (403)
...|++|++|| |.. +. ..+...+...|.. .++.|+++|+++++....+.. -.++.+.++++.+.
T Consensus 39 ~~~ptvIlIHG--~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~--- 113 (442)
T TIGR03230 39 HETKTFIVIHG--WTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEE--- 113 (442)
T ss_pred CCCCeEEEECC--CCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHh---
Confidence 45789999999 332 21 2233334555543 279999999998765544321 23344445555433
Q ss_pred cCCCCCcEEEEEcCchHHHHHHHHHH
Q 015669 270 YGGDPDRIYLMGQSAGAHIAACTLLE 295 (403)
Q Consensus 270 ~g~d~~rI~l~G~S~GG~la~~~a~~ 295 (403)
.+.+.++++|+|||+||++|..++..
T Consensus 114 ~gl~l~~VhLIGHSLGAhIAg~ag~~ 139 (442)
T TIGR03230 114 FNYPWDNVHLLGYSLGAHVAGIAGSL 139 (442)
T ss_pred hCCCCCcEEEEEECHHHHHHHHHHHh
Confidence 35677899999999999999987754
No 107
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.51 E-value=1e-06 Score=80.19 Aligned_cols=100 Identities=28% Similarity=0.335 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhhh
Q 015669 253 VKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDH 332 (403)
Q Consensus 253 ~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~~ 332 (403)
+....+.+.++.++..+.|++++||.+.|.|+||.+++..++.. +..+.+.+..+++......
T Consensus 71 ~~~aa~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~--------------~~~l~G~~~~s~~~p~~~~--- 133 (206)
T KOG2112|consen 71 LHRAADNIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTY--------------PKALGGIFALSGFLPRASI--- 133 (206)
T ss_pred HHHHHHHHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhcc--------------ccccceeeccccccccchh---
Confidence 44555667777777777899999999999999999999988764 1234455555553331100
Q ss_pred hhhhhhhHHHHhhhhcCchhhhcCCccccccCCCcccccCCCCcEEEEEeCCCCCCCHHHHHHHHHHH
Q 015669 333 FHSRGLYRSIFLSIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADARILQILFK 400 (403)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~~~S~~l~lf~ 400 (403)
.+..+.+... .+|++..||+.|++||..-+++.+.|.
T Consensus 134 -------------------~~~~~~~~~~------------~~~i~~~Hg~~d~~vp~~~g~~s~~~l 170 (206)
T KOG2112|consen 134 -------------------GLPGWLPGVN------------YTPILLCHGTADPLVPFRFGEKSAQFL 170 (206)
T ss_pred -------------------hccCCccccC------------cchhheecccCCceeehHHHHHHHHHH
Confidence 0001111000 369999999999999999888765554
No 108
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.49 E-value=3.9e-07 Score=94.41 Aligned_cols=201 Identities=14% Similarity=0.120 Sum_probs=121.2
Q ss_pred eeceeecCCCc--eEEEEEeeCC--CCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCch---
Q 015669 178 RRGIVYGDQPR--NRLDLYFPKS--SDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIK--- 250 (403)
Q Consensus 178 ~~~i~y~~~~~--~~l~vy~P~~--~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~--- 250 (403)
-+.+.|.+.|+ ..+.|.+-+. ..+..|.+|+.|||....-.+.+.... ..|...|++.+-.|-||+++....
T Consensus 441 ~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~sr-l~lld~G~Vla~a~VRGGGe~G~~WHk 519 (712)
T KOG2237|consen 441 VERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASR-LSLLDRGWVLAYANVRGGGEYGEQWHK 519 (712)
T ss_pred EEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccce-eEEEecceEEEEEeeccCcccccchhh
Confidence 34455555565 3455555322 345789999999975444344332222 234568999999999998775431
Q ss_pred --------hhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeecc
Q 015669 251 --------DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSG 322 (403)
Q Consensus 251 --------~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg 322 (403)
..+.|.++++++|.++- -..+++.++.|.|+||.++..+.-++ |..++++++--|
T Consensus 520 ~G~lakKqN~f~Dfia~AeyLve~g---yt~~~kL~i~G~SaGGlLvga~iN~r--------------PdLF~avia~Vp 582 (712)
T KOG2237|consen 520 DGRLAKKQNSFDDFIACAEYLVENG---YTQPSKLAIEGGSAGGLLVGACINQR--------------PDLFGAVIAKVP 582 (712)
T ss_pred ccchhhhcccHHHHHHHHHHHHHcC---CCCccceeEecccCccchhHHHhccC--------------chHhhhhhhcCc
Confidence 24899999999998762 14689999999999999998666544 567788888888
Q ss_pred CCChhhhhhhhhhhhhhHHHHhhhh--cCchhhhcCCccccccCCCcccccCCCCcEEEEEeCCCCCCCHHHHHHHHHHH
Q 015669 323 GYNLFDLVDHFHSRGLYRSIFLSIM--DGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADARILQILFK 400 (403)
Q Consensus 323 ~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~sp~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~~~S~~l~lf~ 400 (403)
+.|+........-... -.-+...- +....+..+++.....+..-.+ ..|-+||..+.+|..|++-++.+ ..+
T Consensus 583 fmDvL~t~~~tilplt-~sd~ee~g~p~~~~~~~~i~~y~pv~~i~~q~---~YPS~lvtta~hD~RV~~~~~~K--~vA 656 (712)
T KOG2237|consen 583 FMDVLNTHKDTILPLT-TSDYEEWGNPEDFEDLIKISPYSPVDNIKKQV---QYPSMLVTTADHDDRVGPLESLK--WVA 656 (712)
T ss_pred ceehhhhhccCccccc-hhhhcccCChhhhhhhheecccCccCCCchhc---cCcceEEeeccCCCcccccchHH--HHH
Confidence 8877654332111100 00000000 0111222333322222221111 24679999999988888877775 444
Q ss_pred hc
Q 015669 401 EL 402 (403)
Q Consensus 401 ~l 402 (403)
+|
T Consensus 657 kl 658 (712)
T KOG2237|consen 657 KL 658 (712)
T ss_pred HH
Confidence 43
No 109
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.49 E-value=8.8e-07 Score=82.27 Aligned_cols=153 Identities=18% Similarity=0.137 Sum_probs=76.3
Q ss_pred CCcEEEEEcCCcccCCccc----cchHHHHHHHhCCCeEEEecccCC--CCCC--------------------c------
Q 015669 202 PKPVVAFITGGAWIIGYKA----WGSLLGQQLSERDIIVACIDYRNF--PQGT--------------------I------ 249 (403)
Q Consensus 202 ~~PvVV~iHGGg~~~g~~~----~~~~~~~~La~~G~~Vv~~dyR~~--~~~~--------------------~------ 249 (403)
+++-||++||.+ .+.. ....+.+.|.+.++.++-+|-..- +... |
T Consensus 3 ~k~riLcLHG~~---~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 79 (212)
T PF03959_consen 3 RKPRILCLHGYG---QNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDD 79 (212)
T ss_dssp ---EEEEE--TT-----HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-
T ss_pred CCceEEEeCCCC---cCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCC
Confidence 568899999944 2332 233455556543677777763320 0000 0
Q ss_pred hhhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhh
Q 015669 250 KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDL 329 (403)
Q Consensus 250 ~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~ 329 (403)
.....+...++++|.+.+.+.|- -.+|+|+|.||.+|+.++.......... ....+|.+|.++|+......
T Consensus 80 ~~~~~~~~~sl~~l~~~i~~~GP---fdGvlGFSQGA~lAa~ll~~~~~~~~~~------~~~~~kf~V~~sg~~p~~~~ 150 (212)
T PF03959_consen 80 DHEYEGLDESLDYLRDYIEENGP---FDGVLGFSQGAALAALLLALQQRGRPDG------AHPPFKFAVFISGFPPPDPD 150 (212)
T ss_dssp SGGG---HHHHHHHHHHHHHH------SEEEEETHHHHHHHHHHHHHHHHST--------T----SEEEEES----EEE-
T ss_pred cccccCHHHHHHHHHHHHHhcCC---eEEEEeecHHHHHHHHHHHHHHhhcccc------cCCCceEEEEEcccCCCchh
Confidence 01256678899999988877551 4699999999999998886543322110 13467888998886553321
Q ss_pred hhhhhhhhhhHHHHhhhhcCchhhhcCCccccccCCCcccccCCCCcEEEEEeCCCCCCCHHHHHHH-HHHH
Q 015669 330 VDHFHSRGLYRSIFLSIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADARILQ-ILFK 400 (403)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~~~S~~l-~lf~ 400 (403)
... . + ....+..|+|.++|.+|.+++.+.++.+ ++|.
T Consensus 151 ~~~-----------------------~----~-------~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~ 188 (212)
T PF03959_consen 151 YQE-----------------------L----Y-------DEPKISIPTLHVIGENDPVVPPERSEALAEMFD 188 (212)
T ss_dssp GTT-----------------------T----T---------TT---EEEEEEETT-SSS-HHHHHHHHHHHH
T ss_pred hhh-----------------------h----h-------ccccCCCCeEEEEeCCCCCcchHHHHHHHHhcc
Confidence 000 0 0 0112236999999999999999888863 3443
No 110
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.49 E-value=5.2e-07 Score=88.93 Aligned_cols=104 Identities=22% Similarity=0.194 Sum_probs=81.6
Q ss_pred ceEEEEEeeCCCCC-----CCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCC--------------
Q 015669 188 RNRLDLYFPKSSDG-----PKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGT-------------- 248 (403)
Q Consensus 188 ~~~l~vy~P~~~~~-----~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~-------------- 248 (403)
...+++|+|....+ +.|+||+-|| ..++...+..++..+|+.||+|..+++.+.-.+.
T Consensus 51 ~~~v~~~~p~~~~~~~~~~~~PlvvlshG---~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~ 127 (365)
T COG4188 51 ERPVDLRLPQGGTGTVALYLLPLVVLSHG---SGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPA 127 (365)
T ss_pred ccccceeccCCCccccccCcCCeEEecCC---CCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchh
Confidence 46799999987555 8999999999 4455677888999999999999999998732221
Q ss_pred -chhhHHHHHHHHHHHHHh---h-hhcCCCCCcEEEEEcCchHHHHHHHHH
Q 015669 249 -IKDMVKDASQGISFVCNN---I-SEYGGDPDRIYLMGQSAGAHIAACTLL 294 (403)
Q Consensus 249 -~~~~~~D~~~al~~l~~~---~-~~~g~d~~rI~l~G~S~GG~la~~~a~ 294 (403)
+-+...|+...+.+|.+. - -.-.+|+.+|.++|||.||+.++.++.
T Consensus 128 ~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laG 178 (365)
T COG4188 128 EWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAG 178 (365)
T ss_pred hhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhcc
Confidence 113467888888888876 1 122578999999999999999997764
No 111
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.48 E-value=4.6e-07 Score=88.41 Aligned_cols=97 Identities=19% Similarity=0.168 Sum_probs=70.4
Q ss_pred CCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchhhHHHHHHHHHHHHHhhhhcC--CCCCcE
Q 015669 200 DGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYG--GDPDRI 277 (403)
Q Consensus 200 ~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~~~~g--~d~~rI 277 (403)
...+..+|++|| +..|.. .+....+.|++ ...|.++|.-+++.+.-|..-.|...+..|..+.++++. ..-+++
T Consensus 87 ~~~~~plVliHG--yGAg~g-~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~Km 162 (365)
T KOG4409|consen 87 SANKTPLVLIHG--YGAGLG-LFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKM 162 (365)
T ss_pred ccCCCcEEEEec--cchhHH-HHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcce
Confidence 456788999999 333332 33333456666 899999999999888777655555556667766666652 234699
Q ss_pred EEEEcCchHHHHHHHHHHHHHHh
Q 015669 278 YLMGQSAGAHIAACTLLEQAIKE 300 (403)
Q Consensus 278 ~l~G~S~GG~la~~~a~~~~~~~ 300 (403)
.|+|||+||+++...|+..+.+.
T Consensus 163 ilvGHSfGGYLaa~YAlKyPerV 185 (365)
T KOG4409|consen 163 ILVGHSFGGYLAAKYALKYPERV 185 (365)
T ss_pred eEeeccchHHHHHHHHHhChHhh
Confidence 99999999999999999875543
No 112
>PLN02872 triacylglycerol lipase
Probab=98.47 E-value=1.1e-06 Score=89.12 Aligned_cols=104 Identities=17% Similarity=0.153 Sum_probs=67.1
Q ss_pred cCCCceEEEEEe-eCC----CCCCCcEEEEEcCCcccCCcc---ccchHHHHHHHhCCCeEEEecccCCCCCC-------
Q 015669 184 GDQPRNRLDLYF-PKS----SDGPKPVVAFITGGAWIIGYK---AWGSLLGQQLSERDIIVACIDYRNFPQGT------- 248 (403)
Q Consensus 184 ~~~~~~~l~vy~-P~~----~~~~~PvVV~iHGGg~~~g~~---~~~~~~~~~La~~G~~Vv~~dyR~~~~~~------- 248 (403)
.++|+..+.++. |.. ...++|+||++||.+...... .....++..|+++||.|+.+|.|+...+.
T Consensus 50 ~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~ 129 (395)
T PLN02872 50 QTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSE 129 (395)
T ss_pred ECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCCCc
Confidence 345555555554 322 123468999999954322211 11234666788999999999999854210
Q ss_pred ---------chhh-HHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHH
Q 015669 249 ---------IKDM-VKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTL 293 (403)
Q Consensus 249 ---------~~~~-~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a 293 (403)
+.+. ..|+.++++++.+. ..+++.++|||+||.+++.++
T Consensus 130 ~~~~fw~~s~~e~a~~Dl~a~id~i~~~------~~~~v~~VGhS~Gg~~~~~~~ 178 (395)
T PLN02872 130 KDKEFWDWSWQELALYDLAEMIHYVYSI------TNSKIFIVGHSQGTIMSLAAL 178 (395)
T ss_pred cchhccCCcHHHHHHHHHHHHHHHHHhc------cCCceEEEEECHHHHHHHHHh
Confidence 1122 46888888888653 136899999999999988544
No 113
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.43 E-value=2.2e-06 Score=89.48 Aligned_cols=180 Identities=17% Similarity=0.151 Sum_probs=114.5
Q ss_pred EEEEEeeCC--CCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCch-----------hhHHHH
Q 015669 190 RLDLYFPKS--SDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIK-----------DMVKDA 256 (403)
Q Consensus 190 ~l~vy~P~~--~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~-----------~~~~D~ 256 (403)
.+.+++-++ .+++.|++|+..|.... .-...+....-.|..+|++....--||+++-... .-..|.
T Consensus 433 PVSLvyrkd~~~~g~~p~lLygYGaYG~-s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DF 511 (682)
T COG1770 433 PVSLVYRKDTKLDGSAPLLLYGYGAYGI-SMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDF 511 (682)
T ss_pred eEEEEEecccCCCCCCcEEEEEeccccc-cCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHH
Confidence 445555443 46778999999994322 2222333333456789999999999997654321 237899
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhh-hhhhhh
Q 015669 257 SQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDL-VDHFHS 335 (403)
Q Consensus 257 ~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~-~~~~~~ 335 (403)
.++.++|.+.- -.++++|+++|.|+||.+....+-.. +..++++++..++.|.... .+.-.+
T Consensus 512 Ia~a~~Lv~~g---~~~~~~i~a~GGSAGGmLmGav~N~~--------------P~lf~~iiA~VPFVDvltTMlD~slP 574 (682)
T COG1770 512 IAAARHLVKEG---YTSPDRIVAIGGSAGGMLMGAVANMA--------------PDLFAGIIAQVPFVDVLTTMLDPSLP 574 (682)
T ss_pred HHHHHHHHHcC---cCCccceEEeccCchhHHHHHHHhhC--------------hhhhhheeecCCccchhhhhcCCCCC
Confidence 99999997752 26788999999999999998877654 4567888888887776542 222111
Q ss_pred hhhhH-HHHhhhh--cCchhhhcCCccccccCCCcccccCCCCcEEEEEeCCCCCCCHHHHH
Q 015669 336 RGLYR-SIFLSIM--DGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADARI 394 (403)
Q Consensus 336 ~~~~~-~~~~~~~--~~~~~~~~~sp~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~~~S~ 394 (403)
..... ..+++.. +..+.+..++|...+.. +..||+|++.|..|+.|.+-+-.
T Consensus 575 LT~~E~~EWGNP~d~e~y~yikSYSPYdNV~a-------~~YP~ilv~~Gl~D~rV~YwEpA 629 (682)
T COG1770 575 LTVTEWDEWGNPLDPEYYDYIKSYSPYDNVEA-------QPYPAILVTTGLNDPRVQYWEPA 629 (682)
T ss_pred CCccchhhhCCcCCHHHHHHHhhcCchhcccc-------CCCCceEEEccccCCccccchHH
Confidence 10000 0111111 11223455666554443 33579999999999999975544
No 114
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.38 E-value=2.2e-06 Score=92.94 Aligned_cols=91 Identities=18% Similarity=0.164 Sum_probs=63.4
Q ss_pred CCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCch------------------------------h
Q 015669 202 PKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIK------------------------------D 251 (403)
Q Consensus 202 ~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~------------------------------~ 251 (403)
..|+||++|| ..++...+..++..|+++||.|+++|+|+++...+. .
T Consensus 448 g~P~VVllHG---~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ 524 (792)
T TIGR03502 448 GWPVVIYQHG---ITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQ 524 (792)
T ss_pred CCcEEEEeCC---CCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHH
Confidence 3579999999 566777778888999999999999999987665221 1
Q ss_pred hHHHHHHHHHHHH------Hhhhhc-CCCCCcEEEEEcCchHHHHHHHHHH
Q 015669 252 MVKDASQGISFVC------NNISEY-GGDPDRIYLMGQSAGAHIAACTLLE 295 (403)
Q Consensus 252 ~~~D~~~al~~l~------~~~~~~-g~d~~rI~l~G~S~GG~la~~~a~~ 295 (403)
.+.|+......+. +....+ ..+..++.++||||||.++...+..
T Consensus 525 ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 525 SILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 2344443333333 100001 1445799999999999999988754
No 115
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.38 E-value=6.7e-07 Score=81.36 Aligned_cols=173 Identities=18% Similarity=0.247 Sum_probs=98.6
Q ss_pred ceEEEEEeeCC--CCCCCcEEEEEcCCcccCCcccc---chHHHHHHHhCCCeEEEecc--cCC-------------CCC
Q 015669 188 RNRLDLYFPKS--SDGPKPVVAFITGGAWIIGYKAW---GSLLGQQLSERDIIVACIDY--RNF-------------PQG 247 (403)
Q Consensus 188 ~~~l~vy~P~~--~~~~~PvVV~iHGGg~~~g~~~~---~~~~~~~La~~G~~Vv~~dy--R~~-------------~~~ 247 (403)
.....||+|.. ..++.|++.|+-| ....... ...+.....+.|++||.+|- |+. +.+
T Consensus 27 ~Mtf~vylPp~a~~~k~~P~lf~LSG---LTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAG 103 (283)
T KOG3101|consen 27 SMTFGVYLPPDAPRGKRCPVLFYLSG---LTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAG 103 (283)
T ss_pred ceEEEEecCCCcccCCcCceEEEecC---CcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCce
Confidence 36789999976 3445799999999 4443332 22233333445999999994 330 011
Q ss_pred Cchh----hHHHHHHHHHHHHHhh----h--hcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCccccccccee
Q 015669 248 TIKD----MVKDASQGISFVCNNI----S--EYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAY 317 (403)
Q Consensus 248 ~~~~----~~~D~~~al~~l~~~~----~--~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~ 317 (403)
++-. ....-.+..+|+.+.+ . ...+|+.++.|+||||||+-|+...+.. +..++.+
T Consensus 104 FYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn--------------~~kykSv 169 (283)
T KOG3101|consen 104 FYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKN--------------PSKYKSV 169 (283)
T ss_pred eEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcC--------------cccccce
Confidence 1111 1111123344443332 1 2358999999999999999998777654 2345555
Q ss_pred eeeccCCChhhhhhhhhhhhhhHHHHhhhhc-CchhhhcCCccccccCCCcccccCCCCcEEEEEeCCCCCCC
Q 015669 318 FGLSGGYNLFDLVDHFHSRGLYRSIFLSIMD-GEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIP 389 (403)
Q Consensus 318 v~isg~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~sp~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP 389 (403)
-+..++.+....- +-...|..++. +...|..+.+...++... ....-+||=+|+.|...+
T Consensus 170 SAFAPI~NP~~cp-------WGqKAf~gYLG~~ka~W~~yDat~lik~y~-----~~~~~ilIdqG~~D~Fl~ 230 (283)
T KOG3101|consen 170 SAFAPICNPINCP-------WGQKAFTGYLGDNKAQWEAYDATHLIKNYR-----GVGDDILIDQGAADNFLA 230 (283)
T ss_pred eccccccCcccCc-------chHHHhhcccCCChHHHhhcchHHHHHhcC-----CCCccEEEecCccchhhh
Confidence 5555555443221 11222333333 234566677666665432 112258899999999887
No 116
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.36 E-value=4.6e-06 Score=78.27 Aligned_cols=108 Identities=16% Similarity=0.185 Sum_probs=65.1
Q ss_pred CcEEEEEcCCcccCCccccchHHHHHHH--------hCCCeEEEecccCCCCCC----chhhHHHHHHHHHHHHHhhhhc
Q 015669 203 KPVVAFITGGAWIIGYKAWGSLLGQQLS--------ERDIIVACIDYRNFPQGT----IKDMVKDASQGISFVCNNISEY 270 (403)
Q Consensus 203 ~PvVV~iHGGg~~~g~~~~~~~~~~~La--------~~G~~Vv~~dyR~~~~~~----~~~~~~D~~~al~~l~~~~~~~ 270 (403)
+..|||||| ..|+......++..+. ...+.++++||....... +....+-+..+++.+.+....-
T Consensus 4 g~pVlFIhG---~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~ 80 (225)
T PF07819_consen 4 GIPVLFIHG---NAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSN 80 (225)
T ss_pred CCEEEEECc---CCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhc
Confidence 468999999 5555554444444441 125889999987633222 2222333444555555444222
Q ss_pred CCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCC
Q 015669 271 GGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGY 324 (403)
Q Consensus 271 g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~ 324 (403)
...+++|.++||||||.+|-.++..... ....++.++.++.+.
T Consensus 81 ~~~~~~vilVgHSmGGlvar~~l~~~~~-----------~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 81 RPPPRSVILVGHSMGGLVARSALSLPNY-----------DPDSVKTIITLGTPH 123 (225)
T ss_pred cCCCCceEEEEEchhhHHHHHHHhcccc-----------ccccEEEEEEEcCCC
Confidence 4567899999999999988877654211 124577777776543
No 117
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.33 E-value=7.9e-06 Score=79.61 Aligned_cols=70 Identities=17% Similarity=0.122 Sum_probs=45.4
Q ss_pred HHHHHHHhCCCeEEEecccCCCCCCch---hhHHHHHHHHHHHHHhhhhcCCC-CCcEEEEEcCchHHHHHHHHH
Q 015669 224 LLGQQLSERDIIVACIDYRNFPQGTIK---DMVKDASQGISFVCNNISEYGGD-PDRIYLMGQSAGAHIAACTLL 294 (403)
Q Consensus 224 ~~~~~La~~G~~Vv~~dyR~~~~~~~~---~~~~D~~~al~~l~~~~~~~g~d-~~rI~l~G~S~GG~la~~~a~ 294 (403)
.+...+.++||+|+++||-|.+. .+- ..-.++.++++-.++.....|+. ..++.++|+|.||+.++.++.
T Consensus 17 ~~l~~~L~~GyaVv~pDY~Glg~-~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~ 90 (290)
T PF03583_consen 17 PFLAAWLARGYAVVAPDYEGLGT-PYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAE 90 (290)
T ss_pred HHHHHHHHCCCEEEecCCCCCCC-cccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHH
Confidence 34456668999999999987544 332 22334444444444433323443 369999999999999987663
No 118
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.33 E-value=1.6e-06 Score=81.87 Aligned_cols=120 Identities=23% Similarity=0.313 Sum_probs=75.9
Q ss_pred eEEEEEeeCC--CCCCCcEEEEEcC-CcccCCccccchHHHHHHHhCC----CeEEEecccCCC-C--------------
Q 015669 189 NRLDLYFPKS--SDGPKPVVAFITG-GAWIIGYKAWGSLLGQQLSERD----IIVACIDYRNFP-Q-------------- 246 (403)
Q Consensus 189 ~~l~vy~P~~--~~~~~PvVV~iHG-Gg~~~g~~~~~~~~~~~La~~G----~~Vv~~dyR~~~-~-------------- 246 (403)
..+.||+|++ ..++.|||+++|| ++|.... ........+.+.| .++|.++.-... .
T Consensus 8 ~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~--~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~ 85 (251)
T PF00756_consen 8 RRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNG--NAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRA 85 (251)
T ss_dssp EEEEEEECTTGGTTTTEEEEEEESHTTHHHHHH--HHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBC
T ss_pred EEEEEEECCCCCCCCCCEEEEEccCCccccccc--hHHHHHHHHHHhCCCCceEEEEEeccccccccccccccccccccc
Confidence 4589999998 7788999999999 4443111 1122233334433 566666653322 0
Q ss_pred --CCchhhHHHH--HHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeecc
Q 015669 247 --GTIKDMVKDA--SQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSG 322 (403)
Q Consensus 247 --~~~~~~~~D~--~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg 322 (403)
........+. .+.+.||+++ |..++++.+|+|+||||..|+.+++.. +..+.+++++||
T Consensus 86 ~~~~~~~~~~~~l~~el~p~i~~~---~~~~~~~~~i~G~S~GG~~Al~~~l~~--------------Pd~F~~~~~~S~ 148 (251)
T PF00756_consen 86 DDSGGGDAYETFLTEELIPYIEAN---YRTDPDRRAIAGHSMGGYGALYLALRH--------------PDLFGAVIAFSG 148 (251)
T ss_dssp TSTTTHHHHHHHHHTHHHHHHHHH---SSEEECCEEEEEETHHHHHHHHHHHHS--------------TTTESEEEEESE
T ss_pred ccCCCCcccceehhccchhHHHHh---cccccceeEEeccCCCcHHHHHHHHhC--------------ccccccccccCc
Confidence 0001112221 2345555554 456666699999999999999999875 578999999998
Q ss_pred CCChh
Q 015669 323 GYNLF 327 (403)
Q Consensus 323 ~~d~~ 327 (403)
.++..
T Consensus 149 ~~~~~ 153 (251)
T PF00756_consen 149 ALDPS 153 (251)
T ss_dssp ESETT
T ss_pred ccccc
Confidence 77765
No 119
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.29 E-value=2e-06 Score=78.64 Aligned_cols=71 Identities=18% Similarity=0.218 Sum_probs=54.3
Q ss_pred CeEEEecccCCCCCCc----h---hhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCC
Q 015669 234 IIVACIDYRNFPQGTI----K---DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGES 306 (403)
Q Consensus 234 ~~Vv~~dyR~~~~~~~----~---~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~ 306 (403)
|.|+++|.||.+.+.- . -...|..+.++.+.+.. +++ +++++|+|+||.+++.++...
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~--~~~~vG~S~Gg~~~~~~a~~~---------- 65 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREAL---GIK--KINLVGHSMGGMLALEYAAQY---------- 65 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHH---TTS--SEEEEEETHHHHHHHHHHHHS----------
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHh---CCC--CeEEEEECCChHHHHHHHHHC----------
Confidence 6799999999887762 1 23677777777776643 554 599999999999999998775
Q ss_pred CcccccccceeeeeccC
Q 015669 307 TTWSVSQIRAYFGLSGG 323 (403)
Q Consensus 307 ~~~~~~~ik~~v~isg~ 323 (403)
++.+++++.+++.
T Consensus 66 ----p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 66 ----PERVKKLVLISPP 78 (230)
T ss_dssp ----GGGEEEEEEESES
T ss_pred ----chhhcCcEEEeee
Confidence 4578888877764
No 120
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.28 E-value=1.7e-05 Score=69.47 Aligned_cols=137 Identities=17% Similarity=0.173 Sum_probs=82.3
Q ss_pred EEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccC-----CCCCCch---hhH-HHHHHHHHHHHHhhhhcCCCCC
Q 015669 205 VVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRN-----FPQGTIK---DMV-KDASQGISFVCNNISEYGGDPD 275 (403)
Q Consensus 205 vVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~-----~~~~~~~---~~~-~D~~~al~~l~~~~~~~g~d~~ 275 (403)
+||+-||.|-.. +...+...+..|+.+|+.|+.+++.. .+.-.-+ ..+ .....++.-+++ +++-.
T Consensus 16 tilLaHGAGasm-dSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~-----~l~~g 89 (213)
T COG3571 16 TILLAHGAGASM-DSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRA-----GLAEG 89 (213)
T ss_pred EEEEecCCCCCC-CCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHh-----cccCC
Confidence 788889955322 22345677888999999999999653 1111111 112 222333334444 45556
Q ss_pred cEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhhhhhhhhhhHHHHhhhhcCchhhhc
Q 015669 276 RIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDHFHSRGLYRSIFLSIMDGEESLRQ 355 (403)
Q Consensus 276 rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (403)
++++.|+||||-++++++-.. ...|..++.+. |.+..-
T Consensus 90 pLi~GGkSmGGR~aSmvade~--------------~A~i~~L~clg--YPfhpp-------------------------- 127 (213)
T COG3571 90 PLIIGGKSMGGRVASMVADEL--------------QAPIDGLVCLG--YPFHPP-------------------------- 127 (213)
T ss_pred ceeeccccccchHHHHHHHhh--------------cCCcceEEEec--CccCCC--------------------------
Confidence 899999999999999887542 12344544432 333211
Q ss_pred CCccccccCCCcccccCCCCcEEEEEeCCCCCCCHHHH
Q 015669 356 YSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADAR 393 (403)
Q Consensus 356 ~sp~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~~~S 393 (403)
....+...+++..+..|+||.||+.|++=..++-
T Consensus 128 ----GKPe~~Rt~HL~gl~tPtli~qGtrD~fGtr~~V 161 (213)
T COG3571 128 ----GKPEQLRTEHLTGLKTPTLITQGTRDEFGTRDEV 161 (213)
T ss_pred ----CCcccchhhhccCCCCCeEEeecccccccCHHHH
Confidence 1111222456666778999999999998766554
No 121
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.26 E-value=4.6e-05 Score=73.96 Aligned_cols=120 Identities=13% Similarity=0.097 Sum_probs=72.1
Q ss_pred CCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEeccc----CCCCCCchhhHHHHHHHHHHHHHhhhhcCCCCCcE
Q 015669 202 PKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYR----NFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRI 277 (403)
Q Consensus 202 ~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR----~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI 277 (403)
..-+||||-|-+-...+-.....+++.|...||.|+.+..+ +++.+.+..-.+|+.++++|++..... ....++|
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~~D~~eI~~~v~ylr~~~~g-~~~~~kI 110 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSLDRDVEEIAQLVEYLRSEKGG-HFGREKI 110 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--HHHHHHHHHHHHHHHHHHS-------S-E
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchhhhHHHHHHHHHHHHHHhhcc-ccCCccE
Confidence 34589999885433444455667788886679999998855 455556667789999999999886311 1256899
Q ss_pred EEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhh
Q 015669 278 YLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVD 331 (403)
Q Consensus 278 ~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~ 331 (403)
+|+|||-|+.-++..+....... ....+.++|...++.|-+.+..
T Consensus 111 VLmGHSTGcQdvl~Yl~~~~~~~---------~~~~VdG~ILQApVSDREa~~~ 155 (303)
T PF08538_consen 111 VLMGHSTGCQDVLHYLSSPNPSP---------SRPPVDGAILQAPVSDREAILN 155 (303)
T ss_dssp EEEEECCHHHHHHHHHHH-TT------------CCCEEEEEEEEE---TTSTTT
T ss_pred EEEecCCCcHHHHHHHhccCccc---------cccceEEEEEeCCCCChhHhhh
Confidence 99999999999998887642111 1357889999888877665444
No 122
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.25 E-value=1.6e-05 Score=77.26 Aligned_cols=86 Identities=22% Similarity=0.267 Sum_probs=65.5
Q ss_pred CCCCCcEEEEEcCCcccCCccccchHHHHHHHhC-CCeEEEecccCCCCCCc------hhhHHHHHHHHHHHHHhhhhcC
Q 015669 199 SDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSER-DIIVACIDYRNFPQGTI------KDMVKDASQGISFVCNNISEYG 271 (403)
Q Consensus 199 ~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~-G~~Vv~~dyR~~~~~~~------~~~~~D~~~al~~l~~~~~~~g 271 (403)
+.++.|.++++|| ..|++..+..+++.|+++ +-.|+++|-|..+.+.. ..+..|+...++++...
T Consensus 48 ~~~~~Pp~i~lHG---l~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~----- 119 (315)
T KOG2382|consen 48 NLERAPPAIILHG---LLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGS----- 119 (315)
T ss_pred ccCCCCceEEecc---cccCCCCHHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHHcccc-----
Confidence 3567899999999 889999899999999988 99999999999776653 24566666666665432
Q ss_pred CCCCcEEEEEcCchHHHHHHHH
Q 015669 272 GDPDRIYLMGQSAGAHIAACTL 293 (403)
Q Consensus 272 ~d~~rI~l~G~S~GG~la~~~a 293 (403)
..-.++.++|||||| +.+.++
T Consensus 120 ~~~~~~~l~GHsmGG-~~~~m~ 140 (315)
T KOG2382|consen 120 TRLDPVVLLGHSMGG-VKVAMA 140 (315)
T ss_pred cccCCceecccCcch-HHHHHH
Confidence 123689999999999 444333
No 123
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.23 E-value=3.9e-06 Score=83.23 Aligned_cols=94 Identities=24% Similarity=0.388 Sum_probs=54.4
Q ss_pred CCCCcEEEEEcCCcccCCc--cccchHHHHHHHh---CCCeEEEecccCCCCCCchhhHHHH---HHHHHHHHHh-hhhc
Q 015669 200 DGPKPVVAFITGGAWIIGY--KAWGSLLGQQLSE---RDIIVACIDYRNFPQGTIKDMVKDA---SQGISFVCNN-ISEY 270 (403)
Q Consensus 200 ~~~~PvVV~iHGGg~~~g~--~~~~~~~~~~La~---~G~~Vv~~dyR~~~~~~~~~~~~D~---~~al~~l~~~-~~~~ 270 (403)
+..+|++|++|| |.... ..+...+.+.+.+ .++.|+++|+.......+.....+. -..+..+... ....
T Consensus 68 n~~~pt~iiiHG--w~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~ 145 (331)
T PF00151_consen 68 NPSKPTVIIIHG--WTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNF 145 (331)
T ss_dssp -TTSEEEEEE----TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcC--cCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhc
Confidence 456899999999 65444 2344555554544 4899999999865444444333322 2222222222 2256
Q ss_pred CCCCCcEEEEEcCchHHHHHHHHHH
Q 015669 271 GGDPDRIYLMGQSAGAHIAACTLLE 295 (403)
Q Consensus 271 g~d~~rI~l~G~S~GG~la~~~a~~ 295 (403)
+.++++|+|+|||+||++|..++..
T Consensus 146 g~~~~~ihlIGhSLGAHvaG~aG~~ 170 (331)
T PF00151_consen 146 GVPPENIHLIGHSLGAHVAGFAGKY 170 (331)
T ss_dssp ---GGGEEEEEETCHHHHHHHHHHH
T ss_pred CCChhHEEEEeeccchhhhhhhhhh
Confidence 8999999999999999999987754
No 124
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.22 E-value=7.2e-05 Score=78.29 Aligned_cols=106 Identities=16% Similarity=0.150 Sum_probs=70.7
Q ss_pred ceeecCCCceEEEEEeeCCCCCCCcEEEEEcCCcccCC----ccccchHHHHHHHhCCCeEEEecccCCCCC----Cchh
Q 015669 180 GIVYGDQPRNRLDLYFPKSSDGPKPVVAFITGGAWIIG----YKAWGSLLGQQLSERDIIVACIDYRNFPQG----TIKD 251 (403)
Q Consensus 180 ~i~y~~~~~~~l~vy~P~~~~~~~PvVV~iHGGg~~~g----~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~----~~~~ 251 (403)
+++|.. +...+.-|.|.++..-+..||+++. |... +-.....+.++|.++|+.|+.+|+|..... .+.+
T Consensus 193 ~VV~~n-~l~eLiqY~P~te~v~~~PLLIVPp--~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r~~~ldD 269 (560)
T TIGR01839 193 AVVFRN-EVLELIQYKPITEQQHARPLLVVPP--QINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHREWGLST 269 (560)
T ss_pred ceeEEC-CceEEEEeCCCCCCcCCCcEEEech--hhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhcCCCHHH
Confidence 444433 3456777778665455567788887 2211 112235688999999999999999974322 2344
Q ss_pred hHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHH
Q 015669 252 MVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTL 293 (403)
Q Consensus 252 ~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a 293 (403)
.+..+.+|++.+++.. ..++|.++|+|+||.++++++
T Consensus 270 Yv~~i~~Ald~V~~~t-----G~~~vnl~GyC~GGtl~a~~~ 306 (560)
T TIGR01839 270 YVDALKEAVDAVRAIT-----GSRDLNLLGACAGGLTCAALV 306 (560)
T ss_pred HHHHHHHHHHHHHHhc-----CCCCeeEEEECcchHHHHHHH
Confidence 4556666777776642 236999999999999999643
No 125
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.21 E-value=1.5e-05 Score=81.38 Aligned_cols=119 Identities=18% Similarity=0.222 Sum_probs=75.5
Q ss_pred eEEEEEeeCCC-CCCCcEEEEEcCCcccCCccccchHHHHHHHhCC----CeEEEecccCCCC--CCch---hhHHHH-H
Q 015669 189 NRLDLYFPKSS-DGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD----IIVACIDYRNFPQ--GTIK---DMVKDA-S 257 (403)
Q Consensus 189 ~~l~vy~P~~~-~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G----~~Vv~~dyR~~~~--~~~~---~~~~D~-~ 257 (403)
..+.||.|..- .+++|||+++||..|.... ........|.++| .++|.+|.-.... ..++ .....+ .
T Consensus 194 r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~--~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~ 271 (411)
T PRK10439 194 RRVWIYTTGDAAPEERPLAILLDGQFWAESM--PVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQ 271 (411)
T ss_pred eEEEEEECCCCCCCCCCEEEEEECHHhhhcC--CHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHH
Confidence 57889999753 4678999999998875321 2223344555555 4578887521110 1111 111111 2
Q ss_pred HHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCC
Q 015669 258 QGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGY 324 (403)
Q Consensus 258 ~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~ 324 (403)
..+-||.++. ....|+++.+|+|+||||..|+.++++. +..|.+++.+||.+
T Consensus 272 eLlP~I~~~y-~~~~d~~~~~IaG~S~GGl~AL~~al~~--------------Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 272 ELLPQVRAIA-PFSDDADRTVVAGQSFGGLAALYAGLHW--------------PERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHhC-CCCCCccceEEEEEChHHHHHHHHHHhC--------------cccccEEEEeccce
Confidence 2334444432 2245788999999999999999999875 56788899999865
No 126
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.18 E-value=5.4e-06 Score=79.61 Aligned_cols=109 Identities=16% Similarity=0.282 Sum_probs=77.5
Q ss_pred CCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCC---------CC---CCc-------h-------
Q 015669 197 KSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNF---------PQ---GTI-------K------- 250 (403)
Q Consensus 197 ~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~---------~~---~~~-------~------- 250 (403)
.+..++.|+|||-|| ..|++..+..++..||++||+|.++++|-. +. ..+ .
T Consensus 112 ~tk~~k~PvvvFSHG---LggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ek 188 (399)
T KOG3847|consen 112 STKNDKYPVVVFSHG---LGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEK 188 (399)
T ss_pred CCCCCCccEEEEecc---cccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCce
Confidence 344678999999999 667888889999999999999999999841 10 000 0
Q ss_pred ----------hhHHHHHHHHHHHHHh----------------hhhc--CCCCCcEEEEEcCchHHHHHHHHHHHHHHhcC
Q 015669 251 ----------DMVKDASQGISFVCNN----------------ISEY--GGDPDRIYLMGQSAGAHIAACTLLEQAIKETG 302 (403)
Q Consensus 251 ----------~~~~D~~~al~~l~~~----------------~~~~--g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~ 302 (403)
.-..++..|++-+++. .+.+ ++|..++.|+|||.||..+......
T Consensus 189 ef~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~------- 261 (399)
T KOG3847|consen 189 EFHIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSS------- 261 (399)
T ss_pred eEEeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcc-------
Confidence 0145666777766542 1111 4677899999999999998765542
Q ss_pred CCCCCcccccccceeeeeccC
Q 015669 303 EGESTTWSVSQIRAYFGLSGG 323 (403)
Q Consensus 303 ~~~~~~~~~~~ik~~v~isg~ 323 (403)
..++++.|.+.++
T Consensus 262 --------~t~FrcaI~lD~W 274 (399)
T KOG3847|consen 262 --------HTDFRCAIALDAW 274 (399)
T ss_pred --------ccceeeeeeeeee
Confidence 2477777776665
No 127
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.17 E-value=4.9e-06 Score=65.03 Aligned_cols=55 Identities=22% Similarity=0.202 Sum_probs=45.6
Q ss_pred eEEEEEeeCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCC
Q 015669 189 NRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGT 248 (403)
Q Consensus 189 ~~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~ 248 (403)
+..+.|.|++. ++.+|+++||- ......+..++..|+++||.|+++|+|+.+.+.
T Consensus 4 L~~~~w~p~~~--~k~~v~i~HG~---~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~ 58 (79)
T PF12146_consen 4 LFYRRWKPENP--PKAVVVIVHGF---GEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSE 58 (79)
T ss_pred EEEEEecCCCC--CCEEEEEeCCc---HHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCC
Confidence 56788888764 78899999994 344557888999999999999999999987765
No 128
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.14 E-value=1.9e-05 Score=80.17 Aligned_cols=91 Identities=15% Similarity=0.070 Sum_probs=54.7
Q ss_pred CCCcEEEEEcCCcccCCcc-------------ccchHH---HHHHHhCCCeEEEecccCCCC-------C----------
Q 015669 201 GPKPVVAFITGGAWIIGYK-------------AWGSLL---GQQLSERDIIVACIDYRNFPQ-------G---------- 247 (403)
Q Consensus 201 ~~~PvVV~iHGGg~~~g~~-------------~~~~~~---~~~La~~G~~Vv~~dyR~~~~-------~---------- 247 (403)
.+-++||++|+ ..|+. .|+..+ ++.|--..|-||++|.=+... +
T Consensus 54 ~~~n~vlv~h~---~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~t 130 (389)
T PRK06765 54 AKSNVILITHY---FSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKT 130 (389)
T ss_pred CCCCEEEEeCC---CCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCC
Confidence 34579999999 33321 122111 122323469999999876432 1
Q ss_pred ------Cch-hhHHHHHHHHHHHHHhhhhcCCCCCcEE-EEEcCchHHHHHHHHHHHHHH
Q 015669 248 ------TIK-DMVKDASQGISFVCNNISEYGGDPDRIY-LMGQSAGAHIAACTLLEQAIK 299 (403)
Q Consensus 248 ------~~~-~~~~D~~~al~~l~~~~~~~g~d~~rI~-l~G~S~GG~la~~~a~~~~~~ 299 (403)
.+| -.+.|..+.+..+. +++++ +++. |+|+||||.+++.++...+..
T Consensus 131 g~~~~~~fP~~t~~d~~~~~~~ll---~~lgi--~~~~~vvG~SmGG~ial~~a~~~P~~ 185 (389)
T PRK06765 131 GKPYGMDFPVVTILDFVRVQKELI---KSLGI--ARLHAVMGPSMGGMQAQEWAVHYPHM 185 (389)
T ss_pred CCccCCCCCcCcHHHHHHHHHHHH---HHcCC--CCceEEEEECHHHHHHHHHHHHChHh
Confidence 122 12555555444443 34566 4775 999999999999999887543
No 129
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.13 E-value=7.6e-06 Score=85.21 Aligned_cols=129 Identities=16% Similarity=0.093 Sum_probs=91.6
Q ss_pred ceeecCCCceEEEEEeeCCCCCCCcEEEEEcCCcccCCc--cccchHHHH---HHHhCCCeEEEecccCCCCCC--c---
Q 015669 180 GIVYGDQPRNRLDLYFPKSSDGPKPVVAFITGGAWIIGY--KAWGSLLGQ---QLSERDIIVACIDYRNFPQGT--I--- 249 (403)
Q Consensus 180 ~i~y~~~~~~~l~vy~P~~~~~~~PvVV~iHGGg~~~g~--~~~~~~~~~---~La~~G~~Vv~~dyR~~~~~~--~--- 249 (403)
.|.-.+.-++..+||+|++. ++.||++..+-.-+...+ ......... +++.+||+||..|.||...+. +
T Consensus 23 ~V~MRDGvrL~~dIy~Pa~~-g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~ 101 (563)
T COG2936 23 MVPMRDGVRLAADIYRPAGA-GPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPE 101 (563)
T ss_pred eEEecCCeEEEEEEEccCCC-CCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCccccee
Confidence 34445556688999999874 789999999933232221 111122222 688899999999999954432 2
Q ss_pred -hhhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChh
Q 015669 250 -KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLF 327 (403)
Q Consensus 250 -~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~ 327 (403)
.....|..+.++|+.++.- -..+|+.+|.|++|...+.+|..+ ++.+|+++..++..|..
T Consensus 102 ~~~E~~Dg~D~I~Wia~QpW----sNG~Vgm~G~SY~g~tq~~~Aa~~--------------pPaLkai~p~~~~~D~y 162 (563)
T COG2936 102 SSREAEDGYDTIEWLAKQPW----SNGNVGMLGLSYLGFTQLAAAALQ--------------PPALKAIAPTEGLVDRY 162 (563)
T ss_pred ccccccchhHHHHHHHhCCc----cCCeeeeecccHHHHHHHHHHhcC--------------Cchheeecccccccccc
Confidence 2368899999999988532 336999999999999999988764 45677777777766643
No 130
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.12 E-value=2.9e-05 Score=69.74 Aligned_cols=138 Identities=19% Similarity=0.118 Sum_probs=73.9
Q ss_pred EEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchhhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCch
Q 015669 206 VAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAG 285 (403)
Q Consensus 206 VV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~G 285 (403)
|+.+||-+ ..+...|...+.+.|... +.|-.+|. .. -|...-++.+.+.+.. .| ++++++|||+|
T Consensus 1 v~IvhG~~-~s~~~HW~~wl~~~l~~~-~~V~~~~~------~~----P~~~~W~~~l~~~i~~--~~-~~~ilVaHSLG 65 (171)
T PF06821_consen 1 VLIVHGYG-GSPPDHWQPWLERQLENS-VRVEQPDW------DN----PDLDEWVQALDQAIDA--ID-EPTILVAHSLG 65 (171)
T ss_dssp EEEE--TT-SSTTTSTHHHHHHHHTTS-EEEEEC--------TS------HHHHHHHHHHCCHC---T-TTEEEEEETHH
T ss_pred CEEeCCCC-CCCccHHHHHHHHhCCCC-eEEecccc------CC----CCHHHHHHHHHHHHhh--cC-CCeEEEEeCHH
Confidence 68899922 122334555666666555 66666654 11 1333344445555442 33 57999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhhhhhhhhhhHHHHhhhhcCchhhhcCCccccccCC
Q 015669 286 AHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDHFHSRGLYRSIFLSIMDGEESLRQYSPEVLVQDP 365 (403)
Q Consensus 286 G~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~ 365 (403)
+..++..+... ....+++++.++|+..-.. .... .....+.+....
T Consensus 66 c~~~l~~l~~~-------------~~~~v~g~lLVAp~~~~~~-~~~~-----------------~~~~~f~~~p~~--- 111 (171)
T PF06821_consen 66 CLTALRWLAEQ-------------SQKKVAGALLVAPFDPDDP-EPFP-----------------PELDGFTPLPRD--- 111 (171)
T ss_dssp HHHHHHHHHHT-------------CCSSEEEEEEES--SCGCH-HCCT-----------------CGGCCCTTSHCC---
T ss_pred HHHHHHHHhhc-------------ccccccEEEEEcCCCcccc-cchh-----------------hhccccccCccc---
Confidence 99999887521 2458999999998533200 0000 000111110000
Q ss_pred CcccccCCCCcEEEEEeCCCCCCCHHHHHHHHH
Q 015669 366 NTRHAVSLLPPIILFHGTADYSIPADARILQIL 398 (403)
Q Consensus 366 ~~~~~~~~~pPvLIiHG~~D~vVP~~~S~~l~l 398 (403)
....|.+++.+++|+.||++.++.++.
T Consensus 112 ------~l~~~~~viaS~nDp~vp~~~a~~~A~ 138 (171)
T PF06821_consen 112 ------PLPFPSIVIASDNDPYVPFERAQRLAQ 138 (171)
T ss_dssp ------HHHCCEEEEEETTBSSS-HHHHHHHHH
T ss_pred ------ccCCCeEEEEcCCCCccCHHHHHHHHH
Confidence 011367999999999999999987543
No 131
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=97.96 E-value=9.4e-06 Score=73.59 Aligned_cols=84 Identities=14% Similarity=0.135 Sum_probs=58.5
Q ss_pred EEEEEcCCcccCCcc-ccchHHHHHHHhC-CCeEEEecccCCCCCCchh-------hHHHHHHHHHHHHHhhhhcCCCCC
Q 015669 205 VVAFITGGAWIIGYK-AWGSLLGQQLSER-DIIVACIDYRNFPQGTIKD-------MVKDASQGISFVCNNISEYGGDPD 275 (403)
Q Consensus 205 vVV~iHGGg~~~g~~-~~~~~~~~~La~~-G~~Vv~~dyR~~~~~~~~~-------~~~D~~~al~~l~~~~~~~g~d~~ 275 (403)
-|+.+.| ..|+. .++......|-.. -+.+|++|-++++.+.-|+ ...|..++++.+.. .+-+
T Consensus 44 ~iLlipG---alGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~a------Lk~~ 114 (277)
T KOG2984|consen 44 YILLIPG---ALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEA------LKLE 114 (277)
T ss_pred eeEeccc---ccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHH------hCCC
Confidence 6777888 44433 3333333334333 4999999999987765442 35788888887665 3457
Q ss_pred cEEEEEcCchHHHHHHHHHHHH
Q 015669 276 RIYLMGQSAGAHIAACTLLEQA 297 (403)
Q Consensus 276 rI~l~G~S~GG~la~~~a~~~~ 297 (403)
++.|+|+|-||..|+..|...+
T Consensus 115 ~fsvlGWSdGgiTalivAak~~ 136 (277)
T KOG2984|consen 115 PFSVLGWSDGGITALIVAAKGK 136 (277)
T ss_pred CeeEeeecCCCeEEEEeeccCh
Confidence 9999999999999998887653
No 132
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=97.94 E-value=5.6e-05 Score=69.72 Aligned_cols=142 Identities=17% Similarity=0.236 Sum_probs=95.3
Q ss_pred EEEEeeCCCCCCCcEEEEEcCCcccCCcccc-chHHHHHHHhCCCeEEEecccCC-CCC---C------------chhhH
Q 015669 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAW-GSLLGQQLSERDIIVACIDYRNF-PQG---T------------IKDMV 253 (403)
Q Consensus 191 l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~-~~~~~~~La~~G~~Vv~~dyR~~-~~~---~------------~~~~~ 253 (403)
++-|+-.....+ .+||.|-- ..|.... -...+..+|..||.|+.||+-.+ |.. . .+...
T Consensus 28 ldaYv~gs~~~~-~~li~i~D---vfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~ 103 (242)
T KOG3043|consen 28 LDAYVVGSTSSK-KVLIVIQD---VFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIW 103 (242)
T ss_pred eeEEEecCCCCC-eEEEEEEe---eeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccch
Confidence 777876543333 56666665 3443332 45677888889999999996433 211 1 12346
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhhhh
Q 015669 254 KDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDHF 333 (403)
Q Consensus 254 ~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~~~ 333 (403)
.|+...++|++. .+++.+|+++|+.+||.++..+.... +.+.+.+...|.+--
T Consensus 104 ~~i~~v~k~lk~-----~g~~kkIGv~GfCwGak~vv~~~~~~---------------~~f~a~v~~hps~~d------- 156 (242)
T KOG3043|consen 104 KDITAVVKWLKN-----HGDSKKIGVVGFCWGAKVVVTLSAKD---------------PEFDAGVSFHPSFVD------- 156 (242)
T ss_pred hHHHHHHHHHHH-----cCCcceeeEEEEeecceEEEEeeccc---------------hhheeeeEecCCcCC-------
Confidence 799999999995 36778999999999999887655432 245566665542110
Q ss_pred hhhhhhHHHHhhhhcCchhhhcCCccccccCCCcccccCCCCcEEEEEeCCCCCCCHHHHHHH
Q 015669 334 HSRGLYRSIFLSIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADARILQ 396 (403)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~~~S~~l 396 (403)
.+++.....|+|++-|+.|.++|+..-.++
T Consensus 157 ---------------------------------~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ 186 (242)
T KOG3043|consen 157 ---------------------------------SADIANVKAPILFLFAELDEDVPPKDVKAW 186 (242)
T ss_pred ---------------------------------hhHHhcCCCCEEEEeecccccCCHHHHHHH
Confidence 122223347999999999999999877653
No 133
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.92 E-value=0.00015 Score=71.41 Aligned_cols=101 Identities=20% Similarity=0.296 Sum_probs=70.5
Q ss_pred eEEEEEeeCCC-CCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCC-----------ch------
Q 015669 189 NRLDLYFPKSS-DGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGT-----------IK------ 250 (403)
Q Consensus 189 ~~l~vy~P~~~-~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~-----------~~------ 250 (403)
..+.+.+|+.. ...+|++|.+.|.|- -+.......++..|+++|+.-+.+.-..++.-. .+
T Consensus 77 a~~~~~~P~~~~~~~rp~~IhLagTGD-h~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g 155 (348)
T PF09752_consen 77 ARFQLLLPKRWDSPYRPVCIHLAGTGD-HGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMG 155 (348)
T ss_pred eEEEEEECCccccCCCceEEEecCCCc-cchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHH
Confidence 35677778764 456899999999542 222223344588899999999988754433221 11
Q ss_pred -hhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHH
Q 015669 251 -DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 251 -~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
..+.+....+.|+.++ | ..+++|.|.||||++|..++...
T Consensus 156 ~~~i~E~~~Ll~Wl~~~----G--~~~~g~~G~SmGG~~A~laa~~~ 196 (348)
T PF09752_consen 156 RATILESRALLHWLERE----G--YGPLGLTGISMGGHMAALAASNW 196 (348)
T ss_pred hHHHHHHHHHHHHHHhc----C--CCceEEEEechhHhhHHhhhhcC
Confidence 2367888889999875 2 24999999999999999877654
No 134
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=97.90 E-value=3.3e-05 Score=71.82 Aligned_cols=50 Identities=28% Similarity=0.347 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccC
Q 015669 256 ASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGG 323 (403)
Q Consensus 256 ~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~ 323 (403)
...|++||+++. .+++++|+|+|.|.||-+|+.++... +.++++|.++|.
T Consensus 6 fe~Ai~~L~~~p---~v~~~~Igi~G~SkGaelALllAs~~---------------~~i~avVa~~ps 55 (213)
T PF08840_consen 6 FEEAIDWLKSHP---EVDPDKIGIIGISKGAELALLLASRF---------------PQISAVVAISPS 55 (213)
T ss_dssp HHHHHHHHHCST---TB--SSEEEEEETHHHHHHHHHHHHS---------------SSEEEEEEES--
T ss_pred HHHHHHHHHhCC---CCCCCCEEEEEECHHHHHHHHHHhcC---------------CCccEEEEeCCc
Confidence 457899999875 46788999999999999999998765 478888887764
No 135
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=97.88 E-value=0.00019 Score=67.17 Aligned_cols=185 Identities=17% Similarity=0.114 Sum_probs=96.4
Q ss_pred CCceEEEEEe--eCC-CCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCC---CCC-----CchhhHH
Q 015669 186 QPRNRLDLYF--PKS-SDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNF---PQG-----TIKDMVK 254 (403)
Q Consensus 186 ~~~~~l~vy~--P~~-~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~---~~~-----~~~~~~~ 254 (403)
+++..+.+|- |++ ...+.++||...| .......+..++.+|+..||.|+.+|--.. ..| .++.+..
T Consensus 10 ~~~~~I~vwet~P~~~~~~~~~tiliA~G---f~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms~g~~ 86 (294)
T PF02273_consen 10 EDGRQIRVWETRPKNNEPKRNNTILIAPG---FARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMSIGKA 86 (294)
T ss_dssp TTTEEEEEEEE---TTS---S-EEEEE-T---T-GGGGGGHHHHHHHHTTT--EEEE---B-------------HHHHHH
T ss_pred CCCCEEEEeccCCCCCCcccCCeEEEecc---hhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChhhcchHHhHH
Confidence 3445677776 444 2345689999999 444556778899999999999999985421 112 2345678
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhhhhh
Q 015669 255 DASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDHFH 334 (403)
Q Consensus 255 D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~~~~ 334 (403)
|+..+++|+++. |+ ++++|+.-|.-|-+|...+.. ..+.-++..-|..|+....+...
T Consensus 87 sL~~V~dwl~~~----g~--~~~GLIAaSLSaRIAy~Va~~----------------i~lsfLitaVGVVnlr~TLe~al 144 (294)
T PF02273_consen 87 SLLTVIDWLATR----GI--RRIGLIAASLSARIAYEVAAD----------------INLSFLITAVGVVNLRDTLEKAL 144 (294)
T ss_dssp HHHHHHHHHHHT----T-----EEEEEETTHHHHHHHHTTT----------------S--SEEEEES--S-HHHHHHHHH
T ss_pred HHHHHHHHHHhc----CC--CcchhhhhhhhHHHHHHHhhc----------------cCcceEEEEeeeeeHHHHHHHHh
Confidence 999999999853 44 589999999999999877642 13555666678888887665443
Q ss_pred hhhhhHHHHhhhhcC---------chhh-hcCCccc-cccCCCcccccCCCCcEEEEEeCCCCCCCHHHHHH
Q 015669 335 SRGLYRSIFLSIMDG---------EESL-RQYSPEV-LVQDPNTRHAVSLLPPIILFHGTADYSIPADARIL 395 (403)
Q Consensus 335 ~~~~~~~~~~~~~~~---------~~~~-~~~sp~~-~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~~~S~~ 395 (403)
...++.......-++ .+.+ ..+-... ....+...++..+..|++.+++.+|.-|-..+-.+
T Consensus 145 ~~Dyl~~~i~~lp~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~ 216 (294)
T PF02273_consen 145 GYDYLQLPIEQLPEDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEE 216 (294)
T ss_dssp SS-GGGS-GGG--SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHH
T ss_pred ccchhhcchhhCCCcccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHH
Confidence 332222111111000 0000 0000000 00011234555667899999999999998777665
No 136
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.87 E-value=0.00014 Score=71.17 Aligned_cols=107 Identities=19% Similarity=0.239 Sum_probs=72.2
Q ss_pred CceEEEEEeeC-CCCCCCcEEEEEcCCcccCCccc---cchHHHHHHHhC-CCeEEEecccCCCCCCch----hhHHHHH
Q 015669 187 PRNRLDLYFPK-SSDGPKPVVAFITGGAWIIGYKA---WGSLLGQQLSER-DIIVACIDYRNFPQGTIK----DMVKDAS 257 (403)
Q Consensus 187 ~~~~l~vy~P~-~~~~~~PvVV~iHGGg~~~g~~~---~~~~~~~~La~~-G~~Vv~~dyR~~~~~~~~----~~~~D~~ 257 (403)
|...+|-..-. ...++...||+.-|.|....+.. ........++++ |..|+.+||||.+.+..+ +.+.|..
T Consensus 120 D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~s~~dLv~~~~ 199 (365)
T PF05677_consen 120 DGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPPSRKDLVKDYQ 199 (365)
T ss_pred CCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCCCHHHHHHHHH
Confidence 44545433322 12344568899988665544421 112234555665 999999999997665543 5677888
Q ss_pred HHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHH
Q 015669 258 QGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLE 295 (403)
Q Consensus 258 ~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~ 295 (403)
+.++|++++.. |..+++|.+.|||.||.++..++..
T Consensus 200 a~v~yL~d~~~--G~ka~~Ii~yG~SLGG~Vqa~AL~~ 235 (365)
T PF05677_consen 200 ACVRYLRDEEQ--GPKAKNIILYGHSLGGGVQAEALKK 235 (365)
T ss_pred HHHHHHHhccc--CCChheEEEeeccccHHHHHHHHHh
Confidence 88888887543 7789999999999999999875433
No 137
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.77 E-value=0.00027 Score=66.19 Aligned_cols=90 Identities=14% Similarity=0.045 Sum_probs=59.3
Q ss_pred CCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchhhHHHHHHHHHHHHHhhhhcCCCCCcEEEEE
Q 015669 202 PKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMG 281 (403)
Q Consensus 202 ~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G 281 (403)
..+-++++|= .+|+...+..|...|-. .+.++.++|.|-+.........|+...++-+...+...-.| ....++|
T Consensus 6 ~~~~L~cfP~---AGGsa~~fr~W~~~lp~-~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~d-~P~alfG 80 (244)
T COG3208 6 ARLRLFCFPH---AGGSASLFRSWSRRLPA-DIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPLLD-APFALFG 80 (244)
T ss_pred CCceEEEecC---CCCCHHHHHHHHhhCCc-hhheeeecCCCcccccCCcccccHHHHHHHHHHHhccccCC-CCeeecc
Confidence 3445555554 23455666666665532 58899999988665555555677777776666655421122 4799999
Q ss_pred cCchHHHHHHHHHHH
Q 015669 282 QSAGAHIAACTLLEQ 296 (403)
Q Consensus 282 ~S~GG~la~~~a~~~ 296 (403)
|||||.+|..+|...
T Consensus 81 HSmGa~lAfEvArrl 95 (244)
T COG3208 81 HSMGAMLAFEVARRL 95 (244)
T ss_pred cchhHHHHHHHHHHH
Confidence 999999999988653
No 138
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.76 E-value=0.00024 Score=64.21 Aligned_cols=87 Identities=15% Similarity=0.120 Sum_probs=53.4
Q ss_pred CcEEEEEcCCcccCCccccchHHHHHHHhC--CCeEEEecccCCCCCC--chhhHHHHHHHHHHHHHhhhhcCCCCCcEE
Q 015669 203 KPVVAFITGGAWIIGYKAWGSLLGQQLSER--DIIVACIDYRNFPQGT--IKDMVKDASQGISFVCNNISEYGGDPDRIY 278 (403)
Q Consensus 203 ~PvVV~iHGGg~~~g~~~~~~~~~~~La~~--G~~Vv~~dyR~~~~~~--~~~~~~D~~~al~~l~~~~~~~g~d~~rI~ 278 (403)
.|.|+++||++. +...+......+... .|.|+.+|.|+.+... ... .... .+.+...+..++.+ ++.
T Consensus 21 ~~~i~~~hg~~~---~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~~~~~~-~~~~---~~~~~~~~~~~~~~--~~~ 91 (282)
T COG0596 21 GPPLVLLHGFPG---SSSVWRPVFKVLPALAARYRVIAPDLRGHGRSDPAGYS-LSAY---ADDLAALLDALGLE--KVV 91 (282)
T ss_pred CCeEEEeCCCCC---chhhhHHHHHHhhccccceEEEEecccCCCCCCccccc-HHHH---HHHHHHHHHHhCCC--ceE
Confidence 559999999543 222222211222222 2999999999877664 111 1111 33444444444554 499
Q ss_pred EEEcCchHHHHHHHHHHHHH
Q 015669 279 LMGQSAGAHIAACTLLEQAI 298 (403)
Q Consensus 279 l~G~S~GG~la~~~a~~~~~ 298 (403)
++|||+||.++..++...+.
T Consensus 92 l~G~S~Gg~~~~~~~~~~p~ 111 (282)
T COG0596 92 LVGHSMGGAVALALALRHPD 111 (282)
T ss_pred EEEecccHHHHHHHHHhcch
Confidence 99999999999999887644
No 139
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=97.64 E-value=0.00069 Score=64.76 Aligned_cols=108 Identities=14% Similarity=0.192 Sum_probs=57.9
Q ss_pred CcEEEEEcCCcccCCccccchHHHHHHH-hCCC----eEEEecccC--CCCCCc-------------h--------hhHH
Q 015669 203 KPVVAFITGGAWIIGYKAWGSLLGQQLS-ERDI----IVACIDYRN--FPQGTI-------------K--------DMVK 254 (403)
Q Consensus 203 ~PvVV~iHGGg~~~g~~~~~~~~~~~La-~~G~----~Vv~~dyR~--~~~~~~-------------~--------~~~~ 254 (403)
.-..||||| ..|+......+...+. +.|. .++.++--| .-.|.+ . ....
T Consensus 11 ~tPTifihG---~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~ 87 (255)
T PF06028_consen 11 TTPTIFIHG---YGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAK 87 (255)
T ss_dssp -EEEEEE-----TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHH
T ss_pred CCcEEEECC---CCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHH
Confidence 346899999 4556666777778886 4442 233333222 000111 1 1122
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChh
Q 015669 255 DASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLF 327 (403)
Q Consensus 255 D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~ 327 (403)
.+..++.+|++ .|++ +++-++||||||..+...+...... ...+.+..+|.+.+.|+-.
T Consensus 88 wl~~vl~~L~~---~Y~~--~~~N~VGHSmGg~~~~~yl~~~~~~---------~~~P~l~K~V~Ia~pfng~ 146 (255)
T PF06028_consen 88 WLKKVLKYLKK---KYHF--KKFNLVGHSMGGLSWTYYLENYGND---------KNLPKLNKLVTIAGPFNGI 146 (255)
T ss_dssp HHHHHHHHHHH---CC----SEEEEEEETHHHHHHHHHHHHCTTG---------TTS-EEEEEEEES--TTTT
T ss_pred HHHHHHHHHHH---hcCC--CEEeEEEECccHHHHHHHHHHhccC---------CCCcccceEEEeccccCcc
Confidence 23333344433 3455 6999999999999999887764211 1235789999999888755
No 140
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.56 E-value=0.00068 Score=68.10 Aligned_cols=45 Identities=16% Similarity=0.076 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHH
Q 015669 253 VKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAI 298 (403)
Q Consensus 253 ~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~ 298 (403)
..|...|+.++..++..++. .-++.++|+|.||++|...+--.+.
T Consensus 163 AiD~INAl~~l~k~~~~~~~-~lp~I~~G~s~G~yla~l~~k~aP~ 207 (403)
T PF11144_consen 163 AIDIINALLDLKKIFPKNGG-GLPKIYIGSSHGGYLAHLCAKIAPW 207 (403)
T ss_pred HHHHHHHHHHHHHhhhcccC-CCcEEEEecCcHHHHHHHHHhhCcc
Confidence 45778888888888766543 3589999999999999988755433
No 141
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.55 E-value=0.00029 Score=65.73 Aligned_cols=92 Identities=23% Similarity=0.306 Sum_probs=54.4
Q ss_pred CCCcEEEEEcCCcccCCccccchHHHHHHHh--CCC---eEEEecccCCCCCCchhhHHHHHHHHHHHHHhhhhcCCCCC
Q 015669 201 GPKPVVAFITGGAWIIGYKAWGSLLGQQLSE--RDI---IVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPD 275 (403)
Q Consensus 201 ~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~--~G~---~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~ 275 (403)
++.-+||++|| ..|+..++..+...+.. .++ .++..-|.........+.-.-....++++.+.+........
T Consensus 2 ~~~hLvV~vHG---L~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~ 78 (217)
T PF05057_consen 2 KPVHLVVFVHG---LWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFKTFDGIDVCGERLAEEILEHIKDYESKIR 78 (217)
T ss_pred CCCEEEEEeCC---CCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccccchhhHHHHHHHHHHHHHhccccccccc
Confidence 34569999999 66777666666666655 122 22222222221112222112233456777776665544456
Q ss_pred cEEEEEcCchHHHHHHHHHH
Q 015669 276 RIYLMGQSAGAHIAACTLLE 295 (403)
Q Consensus 276 rI~l~G~S~GG~la~~~a~~ 295 (403)
+|.++|||+||.++-.++..
T Consensus 79 ~IsfIgHSLGGli~r~al~~ 98 (217)
T PF05057_consen 79 KISFIGHSLGGLIARYALGL 98 (217)
T ss_pred cceEEEecccHHHHHHHHHH
Confidence 99999999999999866654
No 142
>PRK04940 hypothetical protein; Provisional
Probab=97.50 E-value=0.0023 Score=57.71 Aligned_cols=22 Identities=18% Similarity=0.095 Sum_probs=19.6
Q ss_pred CcEEEEEcCchHHHHHHHHHHH
Q 015669 275 DRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 275 ~rI~l~G~S~GG~la~~~a~~~ 296 (403)
+++.|+|.|+||+-|..++...
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~ 81 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC 81 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH
Confidence 4799999999999999998765
No 143
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=97.47 E-value=0.0025 Score=64.77 Aligned_cols=135 Identities=21% Similarity=0.160 Sum_probs=76.8
Q ss_pred ceeeceeecCCCceEEEEEeeCCCC--CCCcEEEEEcCCcccCCccc-cchHHHHHHHhCCCeEEEecccCCCCCCchhh
Q 015669 176 QVRRGIVYGDQPRNRLDLYFPKSSD--GPKPVVAFITGGAWIIGYKA-WGSLLGQQLSERDIIVACIDYRNFPQGTIKDM 252 (403)
Q Consensus 176 ~~~~~i~y~~~~~~~l~vy~P~~~~--~~~PvVV~iHGGg~~~g~~~-~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~~ 252 (403)
.+.+++++.. +...|.-|.|.... .+.|.||++-- ..|... -...+.+.|.+ |+.|+.+|++..........
T Consensus 74 ~v~e~vV~~~-~~~~L~~y~~~~~~~~~~~~pvLiV~P---l~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~ 148 (406)
T TIGR01849 74 PIRERVVWDK-PFCRLIHFKRQGFRAELPGPAVLIVAP---MSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSAG 148 (406)
T ss_pred eeEEEEEEEC-CCeEEEEECCCCcccccCCCcEEEEcC---CchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcC
Confidence 3456666654 33466666665432 12356666665 233221 13556778888 99999999987653333332
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChh
Q 015669 253 VKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLF 327 (403)
Q Consensus 253 ~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~ 327 (403)
..+..+-++++.+-++..| ++ +.|+|.++||.+++.++...+... .+.+++.++.+.+..|+.
T Consensus 149 ~f~ldDYi~~l~~~i~~~G--~~-v~l~GvCqgG~~~laa~Al~a~~~---------~p~~~~sltlm~~PID~~ 211 (406)
T TIGR01849 149 KFDLEDYIDYLIEFIRFLG--PD-IHVIAVCQPAVPVLAAVALMAENE---------PPAQPRSMTLMGGPIDAR 211 (406)
T ss_pred CCCHHHHHHHHHHHHHHhC--CC-CcEEEEchhhHHHHHHHHHHHhcC---------CCCCcceEEEEecCccCC
Confidence 2222233345555554433 23 999999999999887664432221 122466666665555543
No 144
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=97.43 E-value=0.00029 Score=68.74 Aligned_cols=105 Identities=19% Similarity=0.129 Sum_probs=71.3
Q ss_pred CCCcEEEEEcCCcc--cCCccccchHHHHHHHhCCCeEEEecccCCCCCCc-hhhHHH---HHHHHHHHHHhhhhcCCCC
Q 015669 201 GPKPVVAFITGGAW--IIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTI-KDMVKD---ASQGISFVCNNISEYGGDP 274 (403)
Q Consensus 201 ~~~PvVV~iHGGg~--~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~-~~~~~D---~~~al~~l~~~~~~~g~d~ 274 (403)
+....||++.|.+. ..|-.. .=++.||.|+.+|+.++.+++. |-...| +.+.++|..+ ..|..+
T Consensus 241 ngq~LvIC~EGNAGFYEvG~m~-------tP~~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~---~Lgf~~ 310 (517)
T KOG1553|consen 241 NGQDLVICFEGNAGFYEVGVMN-------TPAQLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQ---VLGFRQ 310 (517)
T ss_pred CCceEEEEecCCccceEeeeec-------ChHHhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHH---HcCCCc
Confidence 34678999999421 122111 1245699999999999877643 222222 2234455544 447888
Q ss_pred CcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhh
Q 015669 275 DRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLV 330 (403)
Q Consensus 275 ~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~ 330 (403)
+.|.+.|+|.||..++++|... +.+|++|....+-|+..+.
T Consensus 311 edIilygWSIGGF~~~waAs~Y---------------PdVkavvLDAtFDDllpLA 351 (517)
T KOG1553|consen 311 EDIILYGWSIGGFPVAWAASNY---------------PDVKAVVLDATFDDLLPLA 351 (517)
T ss_pred cceEEEEeecCCchHHHHhhcC---------------CCceEEEeecchhhhhhHH
Confidence 9999999999999999998765 5789998877766655443
No 145
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=97.41 E-value=0.00055 Score=63.38 Aligned_cols=102 Identities=17% Similarity=0.110 Sum_probs=63.1
Q ss_pred cEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCC-CchhhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEc
Q 015669 204 PVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQG-TIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQ 282 (403)
Q Consensus 204 PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~-~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~ 282 (403)
+.|++||++| |+...+..+++.|...++.|+.+++++.... .....++++ ++...+.+.+... ..++.|+|+
T Consensus 1 ~~lf~~p~~g---G~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~~~~si~~l---a~~y~~~I~~~~~-~gp~~L~G~ 73 (229)
T PF00975_consen 1 RPLFCFPPAG---GSASSYRPLARALPDDVIGVYGIEYPGRGDDEPPPDSIEEL---ASRYAEAIRARQP-EGPYVLAGW 73 (229)
T ss_dssp -EEEEESSTT---CSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSHEESSHHHH---HHHHHHHHHHHTS-SSSEEEEEE
T ss_pred CeEEEEcCCc---cCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCCCCCCHHHH---HHHHHHHhhhhCC-CCCeeehcc
Confidence 3689999954 5777788888888654588999998876421 112223332 2222222322222 138999999
Q ss_pred CchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccC
Q 015669 283 SAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGG 323 (403)
Q Consensus 283 S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~ 323 (403)
|+||.+|..+|..-. ..+ ..+..++.+.+.
T Consensus 74 S~Gg~lA~E~A~~Le--~~G---------~~v~~l~liD~~ 103 (229)
T PF00975_consen 74 SFGGILAFEMARQLE--EAG---------EEVSRLILIDSP 103 (229)
T ss_dssp THHHHHHHHHHHHHH--HTT----------SESEEEEESCS
T ss_pred CccHHHHHHHHHHHH--Hhh---------hccCceEEecCC
Confidence 999999999885431 111 356667766643
No 146
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.40 E-value=0.00062 Score=63.57 Aligned_cols=85 Identities=20% Similarity=0.193 Sum_probs=46.4
Q ss_pred EEEEEcCCcccCC-ccccchHHHHHHHhCCCe---EEEecccCCCCCCchhh----HHHHHHHHHHHHHhhhhcCCCCCc
Q 015669 205 VVAFITGGAWIIG-YKAWGSLLGQQLSERDII---VACIDYRNFPQGTIKDM----VKDASQGISFVCNNISEYGGDPDR 276 (403)
Q Consensus 205 vVV~iHGGg~~~g-~~~~~~~~~~~La~~G~~---Vv~~dyR~~~~~~~~~~----~~D~~~al~~l~~~~~~~g~d~~r 276 (403)
.|||+|| ..+ ....+..+...|+++||- |.+++|-.......... .+.+...-+++.+..+. -+. +
T Consensus 3 PVVlVHG---~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~-TGa--k 76 (219)
T PF01674_consen 3 PVVLVHG---TGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAY-TGA--K 76 (219)
T ss_dssp -EEEE-----TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHH-HT----
T ss_pred CEEEECC---CCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHh-hCC--E
Confidence 4899999 444 445677888999999999 79999954332122111 22222333333333322 232 9
Q ss_pred EEEEEcCchHHHHHHHHHH
Q 015669 277 IYLMGQSAGAHIAACTLLE 295 (403)
Q Consensus 277 I~l~G~S~GG~la~~~a~~ 295 (403)
|-|+|||+||.++......
T Consensus 77 VDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 77 VDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp EEEEEETCHHHHHHHHHHH
T ss_pred EEEEEcCCcCHHHHHHHHH
Confidence 9999999999999877653
No 147
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=97.35 E-value=0.0016 Score=59.12 Aligned_cols=99 Identities=18% Similarity=0.292 Sum_probs=63.3
Q ss_pred EEEEEcC-CcccCCccccchHHHHHHHhCCCeEEEecccCC-CCCCch-hhHHHHHHHHHHHHHhhhhcCCCCCcEEEEE
Q 015669 205 VVAFITG-GAWIIGYKAWGSLLGQQLSERDIIVACIDYRNF-PQGTIK-DMVKDASQGISFVCNNISEYGGDPDRIYLMG 281 (403)
Q Consensus 205 vVV~iHG-Gg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~-~~~~~~-~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G 281 (403)
++||+-| |||. .....++..|+++|+.|+.+|-.-+ -...-| ....|+.+.++...+ +++ .+++.|+|
T Consensus 4 ~~v~~SGDgGw~----~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~rtP~~~a~Dl~~~i~~y~~---~w~--~~~vvLiG 74 (192)
T PF06057_consen 4 LAVFFSGDGGWR----DLDKQIAEALAKQGVPVVGVDSLRYFWSERTPEQTAADLARIIRHYRA---RWG--RKRVVLIG 74 (192)
T ss_pred EEEEEeCCCCch----hhhHHHHHHHHHCCCeEEEechHHHHhhhCCHHHHHHHHHHHHHHHHH---HhC--CceEEEEe
Confidence 5777777 4553 4456788999999999999995421 111222 235566666665544 333 36999999
Q ss_pred cCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeecc
Q 015669 282 QSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSG 322 (403)
Q Consensus 282 ~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg 322 (403)
.|.||.+.-.+.-.-+... ..+++.++.+++
T Consensus 75 YSFGADvlP~~~nrLp~~~----------r~~v~~v~Ll~p 105 (192)
T PF06057_consen 75 YSFGADVLPFIYNRLPAAL----------RARVAQVVLLSP 105 (192)
T ss_pred ecCCchhHHHHHhhCCHHH----------HhheeEEEEecc
Confidence 9999988875554322221 246677666655
No 148
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=97.34 E-value=0.0052 Score=54.88 Aligned_cols=82 Identities=11% Similarity=-0.002 Sum_probs=52.9
Q ss_pred CCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhhhhhhhhhhHHHHhhhhcCchhh
Q 015669 274 PDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDHFHSRGLYRSIFLSIMDGEESL 353 (403)
Q Consensus 274 ~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (403)
++.++|++||.|+.+++..+-+. ..++.+.+.++++ |...... .....
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~--------------~~~V~GalLVApp-d~~~~~~-----------------~~~~~ 105 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHI--------------QRQVAGALLVAPP-DVSRPEI-----------------RPKHL 105 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhh--------------hhccceEEEecCC-Ccccccc-----------------chhhc
Confidence 45699999999999999887553 2378888888873 3221100 00011
Q ss_pred hcCCccccccCCCcccccCCCCcEEEEEeCCCCCCCHHHHHHH
Q 015669 354 RQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADARILQ 396 (403)
Q Consensus 354 ~~~sp~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~~~S~~l 396 (403)
..+.+...... .-|.++++.++|+.|+++.++.+
T Consensus 106 ~tf~~~p~~~l---------pfps~vvaSrnDp~~~~~~a~~~ 139 (181)
T COG3545 106 MTFDPIPREPL---------PFPSVVVASRNDPYVSYEHAEDL 139 (181)
T ss_pred cccCCCccccC---------CCceeEEEecCCCCCCHHHHHHH
Confidence 11222111111 12999999999999999999874
No 149
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=97.26 E-value=0.0029 Score=60.91 Aligned_cols=91 Identities=22% Similarity=0.278 Sum_probs=64.0
Q ss_pred CcEEEEEcCCcccCCccccchHHHHHHHhC---CCeEEEecccCCCCCCch---------hhHHHHH-HHHHHHHHhhhh
Q 015669 203 KPVVAFITGGAWIIGYKAWGSLLGQQLSER---DIIVACIDYRNFPQGTIK---------DMVKDAS-QGISFVCNNISE 269 (403)
Q Consensus 203 ~PvVV~iHGGg~~~g~~~~~~~~~~~La~~---G~~Vv~~dyR~~~~~~~~---------~~~~D~~-~al~~l~~~~~~ 269 (403)
++++|||.| +-|-...+..+.+.|.+. .+.|+++.+.|....... -.++|+. ..++++.+.+..
T Consensus 2 ~~li~~IPG---NPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~ 78 (266)
T PF10230_consen 2 RPLIVFIPG---NPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQ 78 (266)
T ss_pred cEEEEEECC---CCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhh
Confidence 468999999 566666777777777644 899999999885332221 1244443 355666665554
Q ss_pred cCCCCCcEEEEEcCchHHHHHHHHHHH
Q 015669 270 YGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 270 ~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
......+++++|||.|+++++.++...
T Consensus 79 ~~~~~~~liLiGHSIGayi~levl~r~ 105 (266)
T PF10230_consen 79 KNKPNVKLILIGHSIGAYIALEVLKRL 105 (266)
T ss_pred hcCCCCcEEEEeCcHHHHHHHHHHHhc
Confidence 332447999999999999999998765
No 150
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.21 E-value=0.0039 Score=58.84 Aligned_cols=119 Identities=11% Similarity=0.048 Sum_probs=59.4
Q ss_pred CCCcEEEEEcCCcccCCccccchHHHHHHHhC-CC--eEEEecccCCCCC-Cchhh---HHHHHHHHHHHHHhhhhcCCC
Q 015669 201 GPKPVVAFITGGAWIIGYKAWGSLLGQQLSER-DI--IVACIDYRNFPQG-TIKDM---VKDASQGISFVCNNISEYGGD 273 (403)
Q Consensus 201 ~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~-G~--~Vv~~dyR~~~~~-~~~~~---~~D~~~al~~l~~~~~~~g~d 273 (403)
.++.++||+|| |...-.......+ .+... ++ .++.+.+...+.. .+... ......++..+...+.+. ..
T Consensus 16 ~~~~vlvfVHG--yn~~f~~a~~r~a-ql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~-~~ 91 (233)
T PF05990_consen 16 PDKEVLVFVHG--YNNSFEDALRRAA-QLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARA-PG 91 (233)
T ss_pred CCCeEEEEEeC--CCCCHHHHHHHHH-HHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhc-cC
Confidence 35679999999 4322111112222 22222 33 6777877654321 11111 111111222222222211 12
Q ss_pred CCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhh
Q 015669 274 PDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFD 328 (403)
Q Consensus 274 ~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~ 328 (403)
..+|.|++||||+.+...++..-...... +.....+..++...+-.+...
T Consensus 92 ~~~I~ilaHSMG~rv~~~aL~~l~~~~~~-----~~~~~~~~~viL~ApDid~d~ 141 (233)
T PF05990_consen 92 IKRIHILAHSMGNRVLLEALRQLASEGER-----PDVKARFDNVILAAPDIDNDV 141 (233)
T ss_pred CceEEEEEeCchHHHHHHHHHHHHhcccc-----hhhHhhhheEEEECCCCCHHH
Confidence 47999999999999999876543222110 001236777888877666543
No 151
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=97.13 E-value=0.0018 Score=65.66 Aligned_cols=108 Identities=17% Similarity=0.167 Sum_probs=73.3
Q ss_pred eeecCCCceEEEEEe-eCCCCCCCcEEEEEcCCcccCCcccc------chHHHHHHHhCCCeEEEecccCCCCC------
Q 015669 181 IVYGDQPRNRLDLYF-PKSSDGPKPVVAFITGGAWIIGYKAW------GSLLGQQLSERDIIVACIDYRNFPQG------ 247 (403)
Q Consensus 181 i~y~~~~~~~l~vy~-P~~~~~~~PvVV~iHGGg~~~g~~~~------~~~~~~~La~~G~~Vv~~dyR~~~~~------ 247 (403)
....++|+-.+.+.. |... +++|+|++.|| ...+... ...++-.|+++||.|+.-|-||...+
T Consensus 51 h~V~T~DgYiL~lhRIp~~~-~~rp~Vll~HG---Ll~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l 126 (403)
T KOG2624|consen 51 HEVTTEDGYILTLHRIPRGK-KKRPVVLLQHG---LLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKL 126 (403)
T ss_pred EEEEccCCeEEEEeeecCCC-CCCCcEEEeec---cccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhccc
Confidence 333455554454443 4433 88999999999 3332221 23456678899999999999982111
Q ss_pred -------Cch----h-hHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHH
Q 015669 248 -------TIK----D-MVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQA 297 (403)
Q Consensus 248 -------~~~----~-~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~ 297 (403)
+|. + +..|+-+.++++.+.- ..++++.+|||.|+.....++..++
T Consensus 127 ~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T-----~~~kl~yvGHSQGtt~~fv~lS~~p 183 (403)
T KOG2624|consen 127 SPSSDKEFWDFSWHEMGTYDLPAMIDYILEKT-----GQEKLHYVGHSQGTTTFFVMLSERP 183 (403)
T ss_pred CCcCCcceeecchhhhhhcCHHHHHHHHHHhc-----cccceEEEEEEccchhheehhcccc
Confidence 221 2 4678889999987742 3579999999999999887776553
No 152
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.08 E-value=0.0015 Score=61.82 Aligned_cols=50 Identities=24% Similarity=0.176 Sum_probs=35.4
Q ss_pred eEEEEEeeCCCC--CCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecc
Q 015669 189 NRLDLYFPKSSD--GPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDY 241 (403)
Q Consensus 189 ~~l~vy~P~~~~--~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dy 241 (403)
....++.|.+.+ ++.|.+++.||.+ +.+......+..++..++.++..+.
T Consensus 33 ~~~~l~~p~~~~~~~~~p~v~~~h~~~---~~~~~~~~~~~~l~~~~~~~~~~~~ 84 (299)
T COG1073 33 LAAVLHLPPSGNEEKKLPAVVFLHGFG---SSKEQSLGYAVLLAEKGYRVLAGDA 84 (299)
T ss_pred eeeEEEecCCCCccccCceEEeccCcc---ccccCcchHHHHhhhceeEEeeecc
Confidence 456788887644 6789999999943 3333333367778888888887765
No 153
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.00 E-value=0.019 Score=59.39 Aligned_cols=105 Identities=19% Similarity=0.226 Sum_probs=66.4
Q ss_pred EEEEEeeCC---CCCCCcEEEEE----cCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchhhHHHHHHHHHH
Q 015669 190 RLDLYFPKS---SDGPKPVVAFI----TGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISF 262 (403)
Q Consensus 190 ~l~vy~P~~---~~~~~PvVV~i----HGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~~~~D~~~al~~ 262 (403)
.++|.-|++ ...++|+||.= ||-| .+|.+. ....+..| +.|..|+.+.+.-.|. --.-+.|+..+..-
T Consensus 53 LlrI~pp~~~~~d~~krP~vViDPRAGHGpG-IGGFK~-dSevG~AL-~~GHPvYFV~F~p~P~--pgQTl~DV~~ae~~ 127 (581)
T PF11339_consen 53 LLRITPPEGVPVDPTKRPFVVIDPRAGHGPG-IGGFKP-DSEVGVAL-RAGHPVYFVGFFPEPE--PGQTLEDVMRAEAA 127 (581)
T ss_pred EEEeECCCCCCCCCCCCCeEEeCCCCCCCCC-ccCCCc-ccHHHHHH-HcCCCeEEEEecCCCC--CCCcHHHHHHHHHH
Confidence 466766654 24567777764 6643 334333 45666666 4589888876543221 11237777776554
Q ss_pred HHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHH
Q 015669 263 VCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIK 299 (403)
Q Consensus 263 l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~ 299 (403)
..+.+.+..-+..+..|+|...||..+++++...+..
T Consensus 128 Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~ 164 (581)
T PF11339_consen 128 FVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDL 164 (581)
T ss_pred HHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCc
Confidence 4444444455555999999999999999998766443
No 154
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.00 E-value=0.029 Score=56.32 Aligned_cols=189 Identities=20% Similarity=0.279 Sum_probs=112.5
Q ss_pred eEEEEEeeCCCCCCCcEEEEEcCCc---ccCCccccchHHHHHHHhC-CCeEEEec----ccC-CC---CC---------
Q 015669 189 NRLDLYFPKSSDGPKPVVAFITGGA---WIIGYKAWGSLLGQQLSER-DIIVACID----YRN-FP---QG--------- 247 (403)
Q Consensus 189 ~~l~vy~P~~~~~~~PvVV~iHGGg---~~~g~~~~~~~~~~~La~~-G~~Vv~~d----yR~-~~---~~--------- 247 (403)
..+.|++|++.......++++.||. +..............+|.. |-+|+.+. -.+ +. ..
T Consensus 50 H~l~I~vP~~~~~~~~all~i~gG~~~~~~~~~~~~~~~~~~~~A~~t~siv~~l~qvPNQpl~f~~d~~~r~ED~iIAy 129 (367)
T PF10142_consen 50 HWLTIYVPKNDKNPDTALLFITGGSNRNWPGPPPDFDDELLQMIARATGSIVAILYQVPNQPLTFDNDPKPRTEDAIIAY 129 (367)
T ss_pred EEEEEEECCCCCCCceEEEEEECCcccCCCCCCCcchHHHHHHHHHhcCCEEEEeCcCCCCCeEeCCCCccccHHHHHHH
Confidence 4699999988556677999999987 3322333445566777777 77777643 111 11 10
Q ss_pred -----------Cch---hhHHHHHHHHHHHHHhhhh-cCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCccccc
Q 015669 248 -----------TIK---DMVKDASQGISFVCNNISE-YGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVS 312 (403)
Q Consensus 248 -----------~~~---~~~~D~~~al~~l~~~~~~-~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~ 312 (403)
.++ .+..-+..|++-+++...+ .+.+.++.+|.|.|==|..++..++.+ +
T Consensus 130 tW~~fl~~~d~~w~l~~PMtka~vrAMD~vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa~D---------------~ 194 (367)
T PF10142_consen 130 TWRKFLETGDPEWPLHLPMTKAAVRAMDAVQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAAVD---------------P 194 (367)
T ss_pred HHHHHhccCCccchhhhhHHHHHHHHHHHHHHHHHhhcCCCccEEEEeCCchHhHHHHHhhccC---------------c
Confidence 011 1344556666666666554 377889999999999999999888632 5
Q ss_pred ccceeeeec-cCCChhhhhhhhhh-hh-h----hHH----HHhhhhcC---chhhhcCCccccccCCCcccccCCCCcEE
Q 015669 313 QIRAYFGLS-GGYNLFDLVDHFHS-RG-L----YRS----IFLSIMDG---EESLRQYSPEVLVQDPNTRHAVSLLPPII 378 (403)
Q Consensus 313 ~ik~~v~is-g~~d~~~~~~~~~~-~~-~----~~~----~~~~~~~~---~~~~~~~sp~~~~~~~~~~~~~~~~pPvL 378 (403)
++++++.+. ...|+...+.+..+ -+ - +.. .+...+.. .+...-.+|..+. .++..|-+
T Consensus 195 RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~~L~~ivDP~~Y~--------~rL~~PK~ 266 (367)
T PF10142_consen 195 RVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEFDKLMQIVDPYSYR--------DRLTMPKY 266 (367)
T ss_pred ceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchhhcCCHHHHHHHHhcCHHHHH--------HhcCccEE
Confidence 677777653 33454443332211 11 0 000 01111111 1122333444443 34457999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHhc
Q 015669 379 LFHGTADYSIPADARILQILFKEL 402 (403)
Q Consensus 379 IiHG~~D~vVP~~~S~~l~lf~~l 402 (403)
||.|+.|+...+..+.- .|.+|
T Consensus 267 ii~atgDeFf~pD~~~~--y~d~L 288 (367)
T PF10142_consen 267 IINATGDEFFVPDSSNF--YYDKL 288 (367)
T ss_pred EEecCCCceeccCchHH--HHhhC
Confidence 99999999999998886 55554
No 155
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=96.83 E-value=0.028 Score=55.35 Aligned_cols=125 Identities=18% Similarity=0.160 Sum_probs=80.4
Q ss_pred CCceEEEEEeeCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCC------------------
Q 015669 186 QPRNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQG------------------ 247 (403)
Q Consensus 186 ~~~~~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~------------------ 247 (403)
++.-++-+|.|....+.+.+||++||-|...........+-+.|.+.||..+++....-...
T Consensus 70 ~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~ 149 (310)
T PF12048_consen 70 GEERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQ 149 (310)
T ss_pred CCEEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCC
Confidence 44567899999888888899999999555444444556677888889999999876541000
Q ss_pred Cch------------------hhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcc
Q 015669 248 TIK------------------DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTW 309 (403)
Q Consensus 248 ~~~------------------~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~ 309 (403)
..+ .....+.+-++-+.+....+++ .+|+|+|++.|++.+..++...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~--~~ivlIg~G~gA~~~~~~la~~------------- 214 (310)
T PF12048_consen 150 QLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGG--KNIVLIGHGTGAGWAARYLAEK------------- 214 (310)
T ss_pred CcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCC--ceEEEEEeChhHHHHHHHHhcC-------------
Confidence 000 0011122222333333333343 4699999999999999888664
Q ss_pred cccccceeeeeccCCC
Q 015669 310 SVSQIRAYFGLSGGYN 325 (403)
Q Consensus 310 ~~~~ik~~v~isg~~d 325 (403)
....+.++|.++....
T Consensus 215 ~~~~~daLV~I~a~~p 230 (310)
T PF12048_consen 215 PPPMPDALVLINAYWP 230 (310)
T ss_pred CCcccCeEEEEeCCCC
Confidence 2334678888877544
No 156
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=96.75 E-value=0.031 Score=56.40 Aligned_cols=103 Identities=25% Similarity=0.281 Sum_probs=66.0
Q ss_pred EEEEEeeCCCCCCCcEEEEEcCCcccCC----ccccchHHHHHHHhCCCeEEEecccCCCCC----CchhhH-HHHHHHH
Q 015669 190 RLDLYFPKSSDGPKPVVAFITGGAWIIG----YKAWGSLLGQQLSERDIIVACIDYRNFPQG----TIKDMV-KDASQGI 260 (403)
Q Consensus 190 ~l~vy~P~~~~~~~PvVV~iHGGg~~~g----~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~----~~~~~~-~D~~~al 260 (403)
.+.-|.|-++.--.+.++.+|- |..- +-.....+..+|.++|..|..+++|.-... .+.+.+ +++..++
T Consensus 94 ~liqy~p~~e~v~~~PlLiVpP--~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~ai 171 (445)
T COG3243 94 ELIQYKPLTEKVLKRPLLIVPP--WINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAI 171 (445)
T ss_pred hhhccCCCCCccCCCceEeecc--ccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHH
Confidence 3455556554423344555665 2211 122345678899999999999999863322 234444 6666777
Q ss_pred HHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHH
Q 015669 261 SFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIK 299 (403)
Q Consensus 261 ~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~ 299 (403)
+.+++.. | .++|.++|++.||.++..++...+.+
T Consensus 172 d~v~~it---g--~~~InliGyCvGGtl~~~ala~~~~k 205 (445)
T COG3243 172 DTVKDIT---G--QKDINLIGYCVGGTLLAAALALMAAK 205 (445)
T ss_pred HHHHHHh---C--ccccceeeEecchHHHHHHHHhhhhc
Confidence 7777653 2 26999999999999998877665444
No 157
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.74 E-value=0.0033 Score=58.53 Aligned_cols=68 Identities=15% Similarity=0.176 Sum_probs=52.0
Q ss_pred cchHHHHHHHhCCCeEEEecccCCCCCCch-----------hhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHH
Q 015669 221 WGSLLGQQLSERDIIVACIDYRNFPQGTIK-----------DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIA 289 (403)
Q Consensus 221 ~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~-----------~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la 289 (403)
.+..++..++++||.|+++|||+.+++... -...|.-++++++++.... ...+.+|||+||++.
T Consensus 45 fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~-----~P~y~vgHS~GGqa~ 119 (281)
T COG4757 45 FYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPG-----HPLYFVGHSFGGQAL 119 (281)
T ss_pred HhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhCCC-----CceEEeeccccceee
Confidence 456677777788999999999997665322 2367889999999886532 478999999999987
Q ss_pred HHHH
Q 015669 290 ACTL 293 (403)
Q Consensus 290 ~~~a 293 (403)
-.+.
T Consensus 120 gL~~ 123 (281)
T COG4757 120 GLLG 123 (281)
T ss_pred cccc
Confidence 6544
No 158
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.70 E-value=0.0062 Score=58.86 Aligned_cols=122 Identities=18% Similarity=0.215 Sum_probs=74.1
Q ss_pred eEEEEEeeCC--CCCCCcEEEEEcCCcccCCccccchHHHHHHHhC----CCeEEEecccC-----CCCCCchhhHHHH-
Q 015669 189 NRLDLYFPKS--SDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSER----DIIVACIDYRN-----FPQGTIKDMVKDA- 256 (403)
Q Consensus 189 ~~l~vy~P~~--~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~----G~~Vv~~dyR~-----~~~~~~~~~~~D~- 256 (403)
.++-+|+|.+ ...++||++++||=.|.... .- ....+.|.+. ..++|.+||-- ...+......+.+
T Consensus 82 ~~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g-~i-~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~ 159 (299)
T COG2382 82 RRRVVYLPPGYNPLEKYPVLYLQDGQDWFRSG-RI-PRILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLA 159 (299)
T ss_pred eeEEEEeCCCCCccccccEEEEeccHHHHhcC-Ch-HHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHH
Confidence 4577888875 45689999999995443211 11 1122333322 67888888743 1112222222222
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChh
Q 015669 257 SQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLF 327 (403)
Q Consensus 257 ~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~ 327 (403)
...+=++.+.... .-+.++-+|+|.|+||.+++++++.. +..|..++..||.++..
T Consensus 160 ~eLlP~v~~~yp~-~~~a~~r~L~G~SlGG~vsL~agl~~--------------Pe~FG~V~s~Sps~~~~ 215 (299)
T COG2382 160 QELLPYVEERYPT-SADADGRVLAGDSLGGLVSLYAGLRH--------------PERFGHVLSQSGSFWWT 215 (299)
T ss_pred HHhhhhhhccCcc-cccCCCcEEeccccccHHHHHHHhcC--------------chhhceeeccCCccccC
Confidence 2234455444322 24567889999999999999999875 56778888888876654
No 159
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.69 E-value=0.021 Score=54.42 Aligned_cols=43 Identities=21% Similarity=0.246 Sum_probs=34.3
Q ss_pred cCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCCh
Q 015669 270 YGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNL 326 (403)
Q Consensus 270 ~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~ 326 (403)
+..|.++.+|+|||+||.+++..++.+ +..|..++.+|+.+-+
T Consensus 132 y~~~~~~~~i~GhSlGGLfvl~aLL~~--------------p~~F~~y~~~SPSlWw 174 (264)
T COG2819 132 YRTNSERTAIIGHSLGGLFVLFALLTY--------------PDCFGRYGLISPSLWW 174 (264)
T ss_pred cccCcccceeeeecchhHHHHHHHhcC--------------cchhceeeeecchhhh
Confidence 578899999999999999999998875 3566777777764433
No 160
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=96.61 E-value=0.015 Score=59.81 Aligned_cols=103 Identities=16% Similarity=0.174 Sum_probs=60.6
Q ss_pred EEEEeeCC-CCCCCcEEEEEcCCcccCCccccchHHHHHHHhC-CCeEEEecccCCCCCC-c-------------hhhHH
Q 015669 191 LDLYFPKS-SDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSER-DIIVACIDYRNFPQGT-I-------------KDMVK 254 (403)
Q Consensus 191 l~vy~P~~-~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~-G~~Vv~~dyR~~~~~~-~-------------~~~~~ 254 (403)
.+.|+-.+ -.++.|++|++-| .+..........+...||++ |-.|+.+++|.++.+. + ..++.
T Consensus 16 qRY~~n~~~~~~~gpifl~~gg-E~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALa 94 (434)
T PF05577_consen 16 QRYWVNDQYYKPGGPIFLYIGG-EGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALA 94 (434)
T ss_dssp EEEEEE-TT--TTSEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHH
T ss_pred EEEEEEhhhcCCCCCEEEEECC-CCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHH
Confidence 44444433 1233677777744 22221111112255678877 9999999999987753 1 13588
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHH
Q 015669 255 DASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 255 D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
|+...+++++.... ..+..+++++|-|+||.+|+++-+..
T Consensus 95 D~a~F~~~~~~~~~--~~~~~pwI~~GgSY~G~Laaw~r~ky 134 (434)
T PF05577_consen 95 DLAYFIRYVKKKYN--TAPNSPWIVFGGSYGGALAAWFRLKY 134 (434)
T ss_dssp HHHHHHHHHHHHTT--TGCC--EEEEEETHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHhhc--CCCCCCEEEECCcchhHHHHHHHhhC
Confidence 88888888875432 23446999999999999999887765
No 161
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=96.58 E-value=0.0059 Score=56.48 Aligned_cols=95 Identities=21% Similarity=0.194 Sum_probs=62.4
Q ss_pred HHHHHHHHHhhhhcC-CCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhhhhhh
Q 015669 257 SQGISFVCNNISEYG-GDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDHFHS 335 (403)
Q Consensus 257 ~~al~~l~~~~~~~g-~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~~~~~ 335 (403)
...+++|.+.+.+.| .| +|+|+|.||.++..++... ..+ ......++++-+|.++|+.......+.
T Consensus 89 eesl~yl~~~i~enGPFD----GllGFSQGA~laa~l~~~~---~~~---~~~~~~P~~kF~v~~SGf~~~~~~~~~--- 155 (230)
T KOG2551|consen 89 EESLEYLEDYIKENGPFD----GLLGFSQGAALAALLAGLG---QKG---LPYVKQPPFKFAVFISGFKFPSKKLDE--- 155 (230)
T ss_pred HHHHHHHHHHHHHhCCCc----cccccchhHHHHHHhhccc---ccC---CcccCCCCeEEEEEEecCCCCcchhhh---
Confidence 456778877777655 34 8999999999999877521 111 111234567888899986443211100
Q ss_pred hhhhHHHHhhhhcCchhhhcCCccccccCCCcccccCCCCcEEEEEeCCCCCCCHHHHHH
Q 015669 336 RGLYRSIFLSIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADARIL 395 (403)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~~~S~~ 395 (403)
..+...+..|.|-|-|+.|.+||.+.|..
T Consensus 156 -------------------------------~~~~~~i~~PSLHi~G~~D~iv~~~~s~~ 184 (230)
T KOG2551|consen 156 -------------------------------SAYKRPLSTPSLHIFGETDTIVPSERSEQ 184 (230)
T ss_pred -------------------------------hhhccCCCCCeeEEecccceeecchHHHH
Confidence 01112334799999999999999998887
No 162
>COG0627 Predicted esterase [General function prediction only]
Probab=96.56 E-value=0.0053 Score=60.52 Aligned_cols=120 Identities=18% Similarity=0.142 Sum_probs=68.4
Q ss_pred EEEEeeCCC-----CCCCcEEEEEcCCcccCCcc-cc--chHHHHHHHhCCCeEEEeccc--------------CCCCCC
Q 015669 191 LDLYFPKSS-----DGPKPVVAFITGGAWIIGYK-AW--GSLLGQQLSERDIIVACIDYR--------------NFPQGT 248 (403)
Q Consensus 191 l~vy~P~~~-----~~~~PvVV~iHGGg~~~g~~-~~--~~~~~~~La~~G~~Vv~~dyR--------------~~~~~~ 248 (403)
+.+++|... +.+.||+++.|| ..++. .. ...+.+...+.|++++++|-. +...++
T Consensus 37 ~~v~~~~~p~s~~m~~~ipV~~~l~G---~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sf 113 (316)
T COG0627 37 FPVELPPVPASPSMGRDIPVLYLLSG---LTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASF 113 (316)
T ss_pred cccccCCcccccccCCCCCEEEEeCC---CCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccce
Confidence 667776654 467899999999 33332 22 223334444559999998532 111222
Q ss_pred chhhHHH-----HHHHHHHHHHh-----hhhcCCCC--CcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccce
Q 015669 249 IKDMVKD-----ASQGISFVCNN-----ISEYGGDP--DRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRA 316 (403)
Q Consensus 249 ~~~~~~D-----~~~al~~l~~~-----~~~~g~d~--~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~ 316 (403)
+.+...- -...-.+|.+. .+.|..+. ++..++|+||||+-|+.+|+.. +.+++.
T Consensus 114 Y~d~~~~~~~~~~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~--------------pd~f~~ 179 (316)
T COG0627 114 YSDWTQPPWASGPYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKH--------------PDRFKS 179 (316)
T ss_pred ecccccCccccCccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhC--------------cchhce
Confidence 2211100 01111122111 12344444 3899999999999999999875 356777
Q ss_pred eeeeccCCChh
Q 015669 317 YFGLSGGYNLF 327 (403)
Q Consensus 317 ~v~isg~~d~~ 327 (403)
+.+++|+.+..
T Consensus 180 ~sS~Sg~~~~s 190 (316)
T COG0627 180 ASSFSGILSPS 190 (316)
T ss_pred ecccccccccc
Confidence 77777776655
No 163
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=96.56 E-value=0.015 Score=54.92 Aligned_cols=104 Identities=19% Similarity=0.230 Sum_probs=64.8
Q ss_pred EEEEEcCCcccCCccccchHHHHHHHhCC-----CeEEEecccCC--CCCCc--------------------hhhHHHHH
Q 015669 205 VVAFITGGAWIIGYKAWGSLLGQQLSERD-----IIVACIDYRNF--PQGTI--------------------KDMVKDAS 257 (403)
Q Consensus 205 vVV~iHGGg~~~g~~~~~~~~~~~La~~G-----~~Vv~~dyR~~--~~~~~--------------------~~~~~D~~ 257 (403)
..||+|| ..|+.+....+...|...+ -.++.+|--+. -.|.+ ...-....
T Consensus 47 PTIfIhG---sgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk 123 (288)
T COG4814 47 PTIFIHG---SGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLK 123 (288)
T ss_pred ceEEEec---CCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHH
Confidence 4689999 5567777777777776654 33444443331 01110 11123344
Q ss_pred HHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCC
Q 015669 258 QGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYN 325 (403)
Q Consensus 258 ~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d 325 (403)
.++.+|++| |++ .++-++||||||......+....... ..+++..+|.+.+.++
T Consensus 124 ~~msyL~~~---Y~i--~k~n~VGhSmGg~~~~~Y~~~yg~dk---------s~P~lnK~V~l~gpfN 177 (288)
T COG4814 124 KAMSYLQKH---YNI--PKFNAVGHSMGGLGLTYYMIDYGDDK---------SLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHh---cCC--ceeeeeeeccccHHHHHHHHHhcCCC---------CCcchhheEEeccccc
Confidence 455555553 344 69999999999999888887653222 2457888999998887
No 164
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=96.53 E-value=0.062 Score=53.46 Aligned_cols=92 Identities=14% Similarity=0.200 Sum_probs=57.1
Q ss_pred CCCcEEEEEcCCcccCCccc-----------cchHHH---HHHHhCCCeEEEecccCCCCCC----------------ch
Q 015669 201 GPKPVVAFITGGAWIIGYKA-----------WGSLLG---QQLSERDIIVACIDYRNFPQGT----------------IK 250 (403)
Q Consensus 201 ~~~PvVV~iHGGg~~~g~~~-----------~~~~~~---~~La~~G~~Vv~~dyR~~~~~~----------------~~ 250 (403)
.+-.+|+.+|+ ..|+.. |+..+. +.+--..|-||++|.=|+..+. +|
T Consensus 49 ~~~NaVli~Ha---LtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP 125 (368)
T COG2021 49 EKDNAVLICHA---LTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFP 125 (368)
T ss_pred cCCceEEEecc---ccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCC
Confidence 34469999999 444322 221111 2233345899999987754221 12
Q ss_pred -hhHHHHHHHHHHHHHhhhhcCCCCCcEE-EEEcCchHHHHHHHHHHHHHHh
Q 015669 251 -DMVKDASQGISFVCNNISEYGGDPDRIY-LMGQSAGAHIAACTLLEQAIKE 300 (403)
Q Consensus 251 -~~~~D~~~al~~l~~~~~~~g~d~~rI~-l~G~S~GG~la~~~a~~~~~~~ 300 (403)
--+.|...+-+.+.+ .+|++ ++. |+|-||||+.|+..+..++...
T Consensus 126 ~~ti~D~V~aq~~ll~---~LGI~--~l~avvGgSmGGMqaleWa~~yPd~V 172 (368)
T COG2021 126 VITIRDMVRAQRLLLD---ALGIK--KLAAVVGGSMGGMQALEWAIRYPDRV 172 (368)
T ss_pred cccHHHHHHHHHHHHH---hcCcc--eEeeeeccChHHHHHHHHHHhChHHH
Confidence 126677666655544 55775 555 9999999999999988775554
No 165
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=96.52 E-value=0.018 Score=59.40 Aligned_cols=90 Identities=10% Similarity=0.153 Sum_probs=54.8
Q ss_pred ccchHHHHHHHhCCCeEEEecccCCCCCCch-h----hHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHH
Q 015669 220 AWGSLLGQQLSERDIIVACIDYRNFPQGTIK-D----MVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294 (403)
Q Consensus 220 ~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~-~----~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~ 294 (403)
..+..+...|++.||.+ ..|.+++|..... . ...++...++.+. +..+. ++|.|+||||||.++...+.
T Consensus 108 ~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~---~~~g~--~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVY---KASGG--KKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred HHHHHHHHHHHHcCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHH---HHcCC--CCEEEEEECHhHHHHHHHHH
Confidence 44566788899999876 6788877654332 1 1233333333222 22233 58999999999999998776
Q ss_pred HHHHHhcCCCCCCcccccccceeeeeccCCC
Q 015669 295 EQAIKETGEGESTTWSVSQIRAYFGLSGGYN 325 (403)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d 325 (403)
..+... ...++.+|.+++.+.
T Consensus 182 ~~p~~~----------~k~I~~~I~la~P~~ 202 (440)
T PLN02733 182 LHSDVF----------EKYVNSWIAIAAPFQ 202 (440)
T ss_pred HCCHhH----------HhHhccEEEECCCCC
Confidence 543221 124666666665443
No 166
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.52 E-value=0.019 Score=56.94 Aligned_cols=114 Identities=14% Similarity=0.192 Sum_probs=62.9
Q ss_pred CCCcEEEEEcCCcccCCccccchHHHHHHHhCCC--eEEEecccCCCC--C-Cc-----hhhHHHHHHHHHHHHHhhhhc
Q 015669 201 GPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDI--IVACIDYRNFPQ--G-TI-----KDMVKDASQGISFVCNNISEY 270 (403)
Q Consensus 201 ~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~--~Vv~~dyR~~~~--~-~~-----~~~~~D~~~al~~l~~~~~~~ 270 (403)
..+-++||+|| |+..........++.....|+ +.|.+-+.-.+. + .+ .....++...+++|.+..
T Consensus 114 ~~k~vlvFvHG--fNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~--- 188 (377)
T COG4782 114 SAKTVLVFVHG--FNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDK--- 188 (377)
T ss_pred CCCeEEEEEcc--cCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCC---
Confidence 34679999999 333322333334444444443 333333321111 0 00 112455566667666542
Q ss_pred CCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChh
Q 015669 271 GGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLF 327 (403)
Q Consensus 271 g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~ 327 (403)
.-++|+|++||||.+++..++-.-.+..... .+.+++.++..++-.|..
T Consensus 189 --~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~------l~~ki~nViLAaPDiD~D 237 (377)
T COG4782 189 --PVKRIYLLAHSMGTWLLMEALRQLAIRADRP------LPAKIKNVILAAPDIDVD 237 (377)
T ss_pred --CCceEEEEEecchHHHHHHHHHHHhccCCcc------hhhhhhheEeeCCCCChh
Confidence 2379999999999999988775543332210 245778888777655543
No 167
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.47 E-value=0.0069 Score=57.91 Aligned_cols=83 Identities=14% Similarity=0.087 Sum_probs=53.9
Q ss_pred cEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCC-chhhHHHHHHH-HHHHHHhhhhcCCCCCcEEEEE
Q 015669 204 PVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGT-IKDMVKDASQG-ISFVCNNISEYGGDPDRIYLMG 281 (403)
Q Consensus 204 PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~-~~~~~~D~~~a-l~~l~~~~~~~g~d~~rI~l~G 281 (403)
|++++||+ ..|+...+..++..|... ..|+.+++++..... ....++|+.+. ++-+++. .....+.|.|
T Consensus 1 ~pLF~fhp---~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~~~~~~l~~~a~~yv~~Ir~~-----QP~GPy~L~G 71 (257)
T COG3319 1 PPLFCFHP---AGGSVLAYAPLAAALGPL-LPVYGLQAPGYGAGEQPFASLDDMAAAYVAAIRRV-----QPEGPYVLLG 71 (257)
T ss_pred CCEEEEcC---CCCcHHHHHHHHHHhccC-ceeeccccCcccccccccCCHHHHHHHHHHHHHHh-----CCCCCEEEEe
Confidence 57899999 455555666777777655 899999999865321 12223333222 2222221 1224899999
Q ss_pred cCchHHHHHHHHHH
Q 015669 282 QSAGAHIAACTLLE 295 (403)
Q Consensus 282 ~S~GG~la~~~a~~ 295 (403)
+|+||.+|..+|..
T Consensus 72 ~S~GG~vA~evA~q 85 (257)
T COG3319 72 WSLGGAVAFEVAAQ 85 (257)
T ss_pred eccccHHHHHHHHH
Confidence 99999999988864
No 168
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.07 E-value=0.025 Score=60.86 Aligned_cols=90 Identities=18% Similarity=0.191 Sum_probs=52.5
Q ss_pred cEEEEEcCCcccCCccccchHHHHHHHh----------------CCCeEEEecccCC----CCCCchhhHHHHHHHHHHH
Q 015669 204 PVVAFITGGAWIIGYKAWGSLLGQQLSE----------------RDIIVACIDYRNF----PQGTIKDMVKDASQGISFV 263 (403)
Q Consensus 204 PvVV~iHGGg~~~g~~~~~~~~~~~La~----------------~G~~Vv~~dyR~~----~~~~~~~~~~D~~~al~~l 263 (403)
-.|+|+.| +.|+-..-..++...+. ..+...++|+-.- -++...+..+=+.+|++++
T Consensus 90 IPVLFIPG---NAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tAm~G~~l~dQtEYV~dAIk~I 166 (973)
T KOG3724|consen 90 IPVLFIPG---NAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTAMHGHILLDQTEYVNDAIKYI 166 (973)
T ss_pred ceEEEecC---CCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhhhccHhHHHHHHHHHHHHHHH
Confidence 46899999 56665554444443331 2456666666431 1112223333334566666
Q ss_pred HHhhhh-cCCC---CCcEEEEEcCchHHHHHHHHHHH
Q 015669 264 CNNISE-YGGD---PDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 264 ~~~~~~-~g~d---~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
.+.-+. -..+ |..|.++||||||.+|..++...
T Consensus 167 LslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlk 203 (973)
T KOG3724|consen 167 LSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLK 203 (973)
T ss_pred HHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhh
Confidence 554332 2234 77899999999999998777553
No 169
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=95.79 E-value=0.019 Score=59.66 Aligned_cols=100 Identities=16% Similarity=0.219 Sum_probs=51.6
Q ss_pred EEeeCCCCCCCcEEEEEcCCcccCCccccch---------------HHHHHHHhCCCeEEEeccc-CCCCCCc-------
Q 015669 193 LYFPKSSDGPKPVVAFITGGAWIIGYKAWGS---------------LLGQQLSERDIIVACIDYR-NFPQGTI------- 249 (403)
Q Consensus 193 vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~---------------~~~~~La~~G~~Vv~~dyR-~~~~~~~------- 249 (403)
.|..+......|+|||++||-...+-...+. ..-..+. +-..++-+|.. +.+++..
T Consensus 67 ~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~-~~~~~l~iDqP~G~G~S~~~~~~~~~ 145 (462)
T PTZ00472 67 AFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWN-NEAYVIYVDQPAGVGFSYADKADYDH 145 (462)
T ss_pred EEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccc-cccCeEEEeCCCCcCcccCCCCCCCC
Confidence 3333444567899999999843221110000 0000111 22456677754 4333321
Q ss_pred --hhhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHH
Q 015669 250 --KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLE 295 (403)
Q Consensus 250 --~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~ 295 (403)
.....|+..+++...+...+ ...++++|+|+|+||+.+-.++..
T Consensus 146 ~~~~~a~d~~~~l~~f~~~~p~--~~~~~~~i~GeSygG~y~p~~a~~ 191 (462)
T PTZ00472 146 NESEVSEDMYNFLQAFFGSHED--LRANDLFVVGESYGGHYAPATAYR 191 (462)
T ss_pred ChHHHHHHHHHHHHHHHHhCcc--ccCCCEEEEeecchhhhHHHHHHH
Confidence 12344544444433222222 234799999999999998777654
No 170
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=95.60 E-value=0.062 Score=50.82 Aligned_cols=87 Identities=18% Similarity=0.175 Sum_probs=56.3
Q ss_pred EEEEEcCCcccCCccc-cchHHHHHHHhCCCeEEEecccCCCCCCc-h-hhHHHHHHHHHHHHHhhhhcCCCCC--cEEE
Q 015669 205 VVAFITGGAWIIGYKA-WGSLLGQQLSERDIIVACIDYRNFPQGTI-K-DMVKDASQGISFVCNNISEYGGDPD--RIYL 279 (403)
Q Consensus 205 vVV~iHGGg~~~g~~~-~~~~~~~~La~~G~~Vv~~dyR~~~~~~~-~-~~~~D~~~al~~l~~~~~~~g~d~~--rI~l 279 (403)
.||.|=||+|.+.... .+..+.+.|+++||.|++.-|...=.+.- . ........+++.+.+.. +.++. .++=
T Consensus 18 gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~tfDH~~~A~~~~~~f~~~~~~L~~~~---~~~~~~lP~~~ 94 (250)
T PF07082_consen 18 GVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVTFDHQAIAREVWERFERCLRALQKRG---GLDPAYLPVYG 94 (250)
T ss_pred EEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHHHhc---CCCcccCCeee
Confidence 7888889988665543 56778899999999999998864211111 1 12233334444444432 23322 5777
Q ss_pred EEcCchHHHHHHHHH
Q 015669 280 MGQSAGAHIAACTLL 294 (403)
Q Consensus 280 ~G~S~GG~la~~~a~ 294 (403)
+|||+|+-+-+.+..
T Consensus 95 vGHSlGcklhlLi~s 109 (250)
T PF07082_consen 95 VGHSLGCKLHLLIGS 109 (250)
T ss_pred eecccchHHHHHHhh
Confidence 999999998876653
No 171
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.40 E-value=0.52 Score=43.92 Aligned_cols=86 Identities=21% Similarity=0.160 Sum_probs=54.1
Q ss_pred cEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCC----CCchhhHHHHHHHHHHHHHhhhhcCCCCCcEEE
Q 015669 204 PVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQ----GTIKDMVKDASQGISFVCNNISEYGGDPDRIYL 279 (403)
Q Consensus 204 PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~----~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l 279 (403)
-.||||-|-|-..-.......+..+|-+.+|..|.+..|-..- +.+....+|+..+++.++. - .....|++
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk~D~edl~~l~~Hi~~----~-~fSt~vVL 111 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLKDDVEDLKCLLEHIQL----C-GFSTDVVL 111 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccccccccHHHHHHHHHHhhc----c-CcccceEE
Confidence 3456665522211122334567788888899999988775433 3344556666666664432 1 23459999
Q ss_pred EEcCchHHHHHHHHH
Q 015669 280 MGQSAGAHIAACTLL 294 (403)
Q Consensus 280 ~G~S~GG~la~~~a~ 294 (403)
+|||-|..=.+..+.
T Consensus 112 ~GhSTGcQdi~yYlT 126 (299)
T KOG4840|consen 112 VGHSTGCQDIMYYLT 126 (299)
T ss_pred EecCccchHHHHHHH
Confidence 999999998887773
No 172
>COG3150 Predicted esterase [General function prediction only]
Probab=95.22 E-value=0.17 Score=45.07 Aligned_cols=78 Identities=22% Similarity=0.298 Sum_probs=45.8
Q ss_pred EEEEcCCcccCCccccch--HHHHHHHhCCCeEEEecccCCCCCCchhhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcC
Q 015669 206 VAFITGGAWIIGYKAWGS--LLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQS 283 (403)
Q Consensus 206 VV~iHGGg~~~g~~~~~~--~~~~~La~~G~~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S 283 (403)
|||+|| |.+ +...+. .+..++.+. +..++|+. +....|...+++-+.+.+.+.+ | +.+.|+|.|
T Consensus 2 ilYlHG--FnS-SP~shka~l~~q~~~~~---~~~i~y~~------p~l~h~p~~a~~ele~~i~~~~-~-~~p~ivGss 67 (191)
T COG3150 2 ILYLHG--FNS-SPGSHKAVLLLQFIDED---VRDIEYST------PHLPHDPQQALKELEKAVQELG-D-ESPLIVGSS 67 (191)
T ss_pred eEEEec--CCC-CcccHHHHHHHHHHhcc---ccceeeec------CCCCCCHHHHHHHHHHHHHHcC-C-CCceEEeec
Confidence 899999 544 444332 233444432 22333332 1112344556666666565544 3 249999999
Q ss_pred chHHHHHHHHHHHH
Q 015669 284 AGAHIAACTLLEQA 297 (403)
Q Consensus 284 ~GG~la~~~a~~~~ 297 (403)
.||+.|.+++....
T Consensus 68 LGGY~At~l~~~~G 81 (191)
T COG3150 68 LGGYYATWLGFLCG 81 (191)
T ss_pred chHHHHHHHHHHhC
Confidence 99999999987653
No 173
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=95.21 E-value=0.049 Score=63.34 Aligned_cols=87 Identities=14% Similarity=0.070 Sum_probs=53.5
Q ss_pred CcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchhhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEc
Q 015669 203 KPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQ 282 (403)
Q Consensus 203 ~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~ 282 (403)
.|.++++||.+ |+...+..+...| ..++.|+.++.++..... ....++....+.+.+.+.....+ .++.++||
T Consensus 1068 ~~~l~~lh~~~---g~~~~~~~l~~~l-~~~~~v~~~~~~g~~~~~--~~~~~l~~la~~~~~~i~~~~~~-~p~~l~G~ 1140 (1296)
T PRK10252 1068 GPTLFCFHPAS---GFAWQFSVLSRYL-DPQWSIYGIQSPRPDGPM--QTATSLDEVCEAHLATLLEQQPH-GPYHLLGY 1140 (1296)
T ss_pred CCCeEEecCCC---CchHHHHHHHHhc-CCCCcEEEEECCCCCCCC--CCCCCHHHHHHHHHHHHHhhCCC-CCEEEEEe
Confidence 46799999944 4444555666666 347999999988754321 11112222233333333322222 47999999
Q ss_pred CchHHHHHHHHHHH
Q 015669 283 SAGAHIAACTLLEQ 296 (403)
Q Consensus 283 S~GG~la~~~a~~~ 296 (403)
|+||.++..++...
T Consensus 1141 S~Gg~vA~e~A~~l 1154 (1296)
T PRK10252 1141 SLGGTLAQGIAARL 1154 (1296)
T ss_pred chhhHHHHHHHHHH
Confidence 99999999988653
No 174
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.13 E-value=0.083 Score=55.42 Aligned_cols=149 Identities=17% Similarity=0.124 Sum_probs=79.8
Q ss_pred CCcEEEEEcCCcccCCccccchHHHHHHHhCC--CeEEEecccCCCCC-CchhhHHHHHHHHHHHHHhhhhcCCCCCcEE
Q 015669 202 PKPVVAFITGGAWIIGYKAWGSLLGQQLSERD--IIVACIDYRNFPQG-TIKDMVKDASQGISFVCNNISEYGGDPDRIY 278 (403)
Q Consensus 202 ~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G--~~Vv~~dyR~~~~~-~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~ 278 (403)
..|+++++||+.-..-..+++..|...|.-.| .-|.++||+...++ .+....+-...+.+++...+.. ......|.
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG~nI~h~ae~~vSf~r~kvlei~g-efpha~Ii 253 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGGANIKHAAEYSVSFDRYKVLEITG-EFPHAPII 253 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCCcchHHHHHHHHHHhhhhhhhhhc-cCCCCceE
Confidence 35899999998732223344555555554333 55667888765443 2222233333333433322221 12346899
Q ss_pred EEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhhhhhhhhhhHHHHhhhhcCchhhhcCCc
Q 015669 279 LMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDHFHSRGLYRSIFLSIMDGEESLRQYSP 358 (403)
Q Consensus 279 l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 358 (403)
|+|.|||+.++....... ....+.++|-+.- .+...- ..++..
T Consensus 254 LvGrsmGAlVachVSpsn-------------sdv~V~~vVCigy--pl~~vd---gprgir------------------- 296 (784)
T KOG3253|consen 254 LVGRSMGALVACHVSPSN-------------SDVEVDAVVCIGY--PLDTVD---GPRGIR------------------- 296 (784)
T ss_pred EEecccCceeeEEecccc-------------CCceEEEEEEecc--cccCCC---cccCCc-------------------
Confidence 999999966554433221 1112555554432 221110 001111
Q ss_pred cccccCCCcccccCCCCcEEEEEeCCCCCCCHHHHHHH
Q 015669 359 EVLVQDPNTRHAVSLLPPIILFHGTADYSIPADARILQ 396 (403)
Q Consensus 359 ~~~~~~~~~~~~~~~~pPvLIiHG~~D~vVP~~~S~~l 396 (403)
.+.+..+..|+|++.|..|..++.+.-+++
T Consensus 297 --------DE~Lldmk~PVLFV~Gsnd~mcspn~ME~v 326 (784)
T KOG3253|consen 297 --------DEALLDMKQPVLFVIGSNDHMCSPNSMEEV 326 (784)
T ss_pred --------chhhHhcCCceEEEecCCcccCCHHHHHHH
Confidence 122334456999999999999999888763
No 175
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=95.08 E-value=0.086 Score=53.59 Aligned_cols=89 Identities=17% Similarity=0.215 Sum_probs=53.1
Q ss_pred cchHHHHHHHhCCCeE-----EE-ecccCCCCCCchhhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHH
Q 015669 221 WGSLLGQQLSERDIIV-----AC-IDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294 (403)
Q Consensus 221 ~~~~~~~~La~~G~~V-----v~-~dyR~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~ 294 (403)
.+..+.+.|.+.||.. .+ .|+|..+. ........+...++.+. +.. .++|.|+||||||.++...+.
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~-~~~~~~~~lk~~ie~~~----~~~--~~kv~li~HSmGgl~~~~fl~ 138 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA-ERDEYFTKLKQLIEEAY----KKN--GKKVVLIAHSMGGLVARYFLQ 138 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhchh-hHHHHHHHHHHHHHHHH----Hhc--CCcEEEEEeCCCchHHHHHHH
Confidence 4566778888766643 23 78888776 11122223333333222 222 479999999999999998775
Q ss_pred HHHHHhcCCCCCCcccccccceeeeeccCC
Q 015669 295 EQAIKETGEGESTTWSVSQIRAYFGLSGGY 324 (403)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~ik~~v~isg~~ 324 (403)
..... .|....|+.+|.+++++
T Consensus 139 ~~~~~--------~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 139 WMPQE--------EWKDKYIKRFISIGTPF 160 (389)
T ss_pred hccch--------hhHHhhhhEEEEeCCCC
Confidence 53211 03345677777777654
No 176
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=94.74 E-value=0.054 Score=53.93 Aligned_cols=85 Identities=16% Similarity=0.139 Sum_probs=55.0
Q ss_pred cEEEEEcCCcccCCccccchHHHHHHHhCCCe---EEEecccCCCCCCchhhHHHHHHHHHHHHHhhhhcCCCCCcEEEE
Q 015669 204 PVVAFITGGAWIIGYKAWGSLLGQQLSERDII---VACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLM 280 (403)
Q Consensus 204 PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~---Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~ 280 (403)
-.+|++||+++ +...+..+..+++..|+. +..+++... ....+ ...+......++++.+...+. .+|.++
T Consensus 60 ~pivlVhG~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~-~~~~~~ql~~~V~~~l~~~ga--~~v~Li 132 (336)
T COG1075 60 EPIVLVHGLGG---GYGNFLPLDYRLAILGWLTNGVYAFELSGG-DGTYS-LAVRGEQLFAYVDEVLAKTGA--KKVNLI 132 (336)
T ss_pred ceEEEEccCcC---CcchhhhhhhhhcchHHHhccccccccccc-CCCcc-ccccHHHHHHHHHHHHhhcCC--CceEEE
Confidence 37899999643 333444455556666777 888877644 22222 233444566677766655443 799999
Q ss_pred EcCchHHHHHHHHHH
Q 015669 281 GQSAGAHIAACTLLE 295 (403)
Q Consensus 281 G~S~GG~la~~~a~~ 295 (403)
|||+||.++...+..
T Consensus 133 gHS~GG~~~ry~~~~ 147 (336)
T COG1075 133 GHSMGGLDSRYYLGV 147 (336)
T ss_pred eecccchhhHHHHhh
Confidence 999999999966544
No 177
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.17 E-value=0.35 Score=44.74 Aligned_cols=92 Identities=13% Similarity=0.182 Sum_probs=53.3
Q ss_pred CCCCcEEEEEcCCcccCCc-------------cccchHHHHHHHhCCCeEEEeccc----CCCC-----CCchhhHHHHH
Q 015669 200 DGPKPVVAFITGGAWIIGY-------------KAWGSLLGQQLSERDIIVACIDYR----NFPQ-----GTIKDMVKDAS 257 (403)
Q Consensus 200 ~~~~PvVV~iHGGg~~~g~-------------~~~~~~~~~~La~~G~~Vv~~dyR----~~~~-----~~~~~~~~D~~ 257 (403)
..+..++|+|||.|.+... ......+.++..+.||.|+..|-. .+.. -.....++.+
T Consensus 98 t~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~- 176 (297)
T KOG3967|consen 98 TNPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHA- 176 (297)
T ss_pred cCccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHH-
Confidence 4456699999998765321 112233455555678888887743 1111 1111223332
Q ss_pred HHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHH
Q 015669 258 QGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 258 ~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
.++-.++-. -..+..|+++.||.||...+.++...
T Consensus 177 ---~yvw~~~v~-pa~~~sv~vvahsyGG~~t~~l~~~f 211 (297)
T KOG3967|consen 177 ---KYVWKNIVL-PAKAESVFVVAHSYGGSLTLDLVERF 211 (297)
T ss_pred ---HHHHHHHhc-ccCcceEEEEEeccCChhHHHHHHhc
Confidence 222222211 24568999999999999999887654
No 178
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=93.99 E-value=0.74 Score=46.49 Aligned_cols=125 Identities=10% Similarity=0.010 Sum_probs=62.4
Q ss_pred CCCCCCcEEEEEcCCcccCCccccc----------------hHHHHHHHhCCCeEEEecccCC-CCCCc--h-----hhH
Q 015669 198 SSDGPKPVVAFITGGAWIIGYKAWG----------------SLLGQQLSERDIIVACIDYRNF-PQGTI--K-----DMV 253 (403)
Q Consensus 198 ~~~~~~PvVV~iHGGg~~~g~~~~~----------------~~~~~~La~~G~~Vv~~dyR~~-~~~~~--~-----~~~ 253 (403)
+..+..|+|||+.||-..++-...+ ...-..+ .+-..++-+|...+ +++.. . ...
T Consensus 35 ~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW-~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~ 113 (415)
T PF00450_consen 35 NDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSW-NKFANLLFIDQPVGTGFSYGNDPSDYVWNDD 113 (415)
T ss_dssp SGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-G-GGTSEEEEE--STTSTT-EESSGGGGS-SHH
T ss_pred CCCCCccEEEEecCCceeccccccccccCceEEeeccccccccccccc-ccccceEEEeecCceEEeeccccccccchhh
Confidence 3456789999999984322210000 0000011 12255666775542 22211 1 224
Q ss_pred HHHHHHHHHHHHhhhhcC-CCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChh
Q 015669 254 KDASQGISFVCNNISEYG-GDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLF 327 (403)
Q Consensus 254 ~D~~~al~~l~~~~~~~g-~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~ 327 (403)
.++.+..++|+.-..+|. ...++++|+|+|+||+-+-.++..--...... ....-.+++++.-.|..+..
T Consensus 114 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~----~~~~inLkGi~IGng~~dp~ 184 (415)
T PF00450_consen 114 QAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKG----DQPKINLKGIAIGNGWIDPR 184 (415)
T ss_dssp HHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC------STTSEEEEEEEESE-SBHH
T ss_pred HHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccc----cccccccccceecCcccccc
Confidence 445555666665555543 33459999999999998876664322221110 00234688888888888765
No 179
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=93.79 E-value=0.12 Score=43.91 Aligned_cols=36 Identities=17% Similarity=0.230 Sum_probs=26.8
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHH
Q 015669 259 GISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 259 al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
..+++.+..+++. ..+|.+.|||+||.+|..+++..
T Consensus 50 ~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 50 ILDALKELVEKYP--DYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccc--CccchhhccchHHHHHHHHHHhh
Confidence 4455555444443 37999999999999999888764
No 180
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=93.53 E-value=0.65 Score=44.42 Aligned_cols=102 Identities=16% Similarity=0.112 Sum_probs=57.0
Q ss_pred CcEEEEEcCCcccCCccccchHHHHHHHhC-CCeEEEecccCCCCCCchhhHHHHHHHHHHHHHhhhhcCCCCCcEEEEE
Q 015669 203 KPVVAFITGGAWIIGYKAWGSLLGQQLSER-DIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMG 281 (403)
Q Consensus 203 ~PvVV~iHGGg~~~g~~~~~~~~~~~La~~-G~~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G 281 (403)
.|+ |.+||=|-.. +......+.+.+.+. |..|.++|---+....+-..+.++...+.-...+..+. ++-+.++|
T Consensus 24 ~P~-ii~HGigd~c-~~~~~~~~~q~l~~~~g~~v~~leig~g~~~s~l~pl~~Qv~~~ce~v~~m~~l---sqGynivg 98 (296)
T KOG2541|consen 24 VPV-IVWHGIGDSC-SSLSMANLTQLLEELPGSPVYCLEIGDGIKDSSLMPLWEQVDVACEKVKQMPEL---SQGYNIVG 98 (296)
T ss_pred CCE-EEEeccCccc-ccchHHHHHHHHHhCCCCeeEEEEecCCcchhhhccHHHHHHHHHHHHhcchhc---cCceEEEE
Confidence 454 5579933211 112355666666666 99999988532211222223444443332222233322 46789999
Q ss_pred cCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeecc
Q 015669 282 QSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSG 322 (403)
Q Consensus 282 ~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg 322 (403)
.|.||.++-.++-.. ..+.++.+|.++|
T Consensus 99 ~SQGglv~Raliq~c-------------d~ppV~n~ISL~g 126 (296)
T KOG2541|consen 99 YSQGGLVARALIQFC-------------DNPPVKNFISLGG 126 (296)
T ss_pred EccccHHHHHHHHhC-------------CCCCcceeEeccC
Confidence 999999988666433 1246677776654
No 181
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=93.32 E-value=0.2 Score=46.97 Aligned_cols=40 Identities=18% Similarity=0.405 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHH
Q 015669 254 KDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 254 ~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
..+..|++++.+.+..++ ++|.+.|||.||.+|..+++..
T Consensus 66 ~~q~~A~~yl~~~~~~~~---~~i~v~GHSkGGnLA~yaa~~~ 105 (224)
T PF11187_consen 66 PQQKSALAYLKKIAKKYP---GKIYVTGHSKGGNLAQYAAANC 105 (224)
T ss_pred HHHHHHHHHHHHHHHhCC---CCEEEEEechhhHHHHHHHHHc
Confidence 334678888888776553 3699999999999999988763
No 182
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=93.31 E-value=1.5 Score=41.09 Aligned_cols=109 Identities=11% Similarity=0.041 Sum_probs=55.0
Q ss_pred EEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCchhhHHHHHHHHHHHHHhhhhcCCCC-CcEEEEEcCc
Q 015669 206 VAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDP-DRIYLMGQSA 284 (403)
Q Consensus 206 VV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~-~rI~l~G~S~ 284 (403)
+|.+-| |............+...+.|+.++.+-.+.... .++. ..+..+++.+.+.+.+..-+. .+|.+-.+|.
T Consensus 2 lvvl~g--W~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~-~~~~--~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSn 76 (240)
T PF05705_consen 2 LVVLLG--WMGAKPKHLAKYSDLYQDPGFDILLVTSPPADF-FWPS--KRLAPAADKLLELLSDSQSASPPPILFHSFSN 76 (240)
T ss_pred EEEEEe--CCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHH-eeec--cchHHHHHHHHHHhhhhccCCCCCEEEEEEEC
Confidence 344455 763333333334455556899999875443211 1111 333334444444443332222 3899999999
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccC
Q 015669 285 GAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGG 323 (403)
Q Consensus 285 GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~ 323 (403)
||......+...-.... ......+.+++.|..|.+
T Consensus 77 GG~~~~~~l~~~~~~~~----~~~~~~~~i~g~I~DS~P 111 (240)
T PF05705_consen 77 GGSFLYSQLLEAYQSRK----KFGKLLPRIKGIIFDSCP 111 (240)
T ss_pred chHHHHHHHHHHHHhcc----cccccccccceeEEeCCC
Confidence 88888776653211111 011122347777766543
No 183
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=93.20 E-value=2.3 Score=41.36 Aligned_cols=121 Identities=15% Similarity=0.103 Sum_probs=72.0
Q ss_pred EEEEeeCCCCCCCcEEEEEcCCcccCCccc---cchHHHHHHHhCCCeEEEecccCCCCC--------CchhhHHHHHHH
Q 015669 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKA---WGSLLGQQLSERDIIVACIDYRNFPQG--------TIKDMVKDASQG 259 (403)
Q Consensus 191 l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~---~~~~~~~~La~~G~~Vv~~dyR~~~~~--------~~~~~~~D~~~a 259 (403)
+++.+--+..+++|++|-+|.-|-+..+.- ........+.++ +.|+-+|-.|...+ .+|. .+|+.+-
T Consensus 34 v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~y~yPs-md~LAd~ 111 (326)
T KOG2931|consen 34 VHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEGYPYPS-MDDLADM 111 (326)
T ss_pred EEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCCCCCCC-HHHHHHH
Confidence 555554444557899999999543322211 112233455555 99999988863222 2222 4555555
Q ss_pred HHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhhh
Q 015669 260 ISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDH 332 (403)
Q Consensus 260 l~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~~ 332 (403)
+..|.++ |+. +-|.-+|.-+||++-...|+.. ++.+-++|.+.....-..+++|
T Consensus 112 l~~VL~~---f~l--k~vIg~GvGAGAyIL~rFAl~h--------------p~rV~GLvLIn~~~~a~gwiew 165 (326)
T KOG2931|consen 112 LPEVLDH---FGL--KSVIGMGVGAGAYILARFALNH--------------PERVLGLVLINCDPCAKGWIEW 165 (326)
T ss_pred HHHHHHh---cCc--ceEEEecccccHHHHHHHHhcC--------------hhheeEEEEEecCCCCchHHHH
Confidence 5555554 344 5788899999999999999876 3456666666543333333333
No 184
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.93 E-value=1.1 Score=42.64 Aligned_cols=97 Identities=21% Similarity=0.330 Sum_probs=61.5
Q ss_pred EEEEeeCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhC-C--CeEEEecccCCCCCC---c-------hh--hHHH
Q 015669 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSER-D--IIVACIDYRNFPQGT---I-------KD--MVKD 255 (403)
Q Consensus 191 l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~-G--~~Vv~~dyR~~~~~~---~-------~~--~~~D 255 (403)
+..|+-+ ...+++.++++.| +-|....+..+++.|... + ..|+++..-+...-+ . .+ .++|
T Consensus 18 ~~~~v~~-~~~~~~li~~IpG---NPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~ 93 (301)
T KOG3975|consen 18 LKPWVTK-SGEDKPLIVWIPG---NPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQD 93 (301)
T ss_pred eeeeecc-CCCCceEEEEecC---CCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhh
Confidence 3444433 2467899999999 667777888888888665 3 346665443321111 0 01 1444
Q ss_pred HH-HHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHH
Q 015669 256 AS-QGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLE 295 (403)
Q Consensus 256 ~~-~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~ 295 (403)
+. --+++++++.-+ -.+|+++|||-|+++.+.++..
T Consensus 94 QV~HKlaFik~~~Pk----~~ki~iiGHSiGaYm~Lqil~~ 130 (301)
T KOG3975|consen 94 QVDHKLAFIKEYVPK----DRKIYIIGHSIGAYMVLQILPS 130 (301)
T ss_pred HHHHHHHHHHHhCCC----CCEEEEEecchhHHHHHHHhhh
Confidence 43 356777766532 2699999999999999988754
No 185
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=92.72 E-value=1.1 Score=45.34 Aligned_cols=92 Identities=16% Similarity=0.232 Sum_probs=61.9
Q ss_pred cEEEEEcCCcccCCccccch---HHHHHHHhC-CCeEEEecccCCCCCC-c----------------hhhHHHHHHHHHH
Q 015669 204 PVVAFITGGAWIIGYKAWGS---LLGQQLSER-DIIVACIDYRNFPQGT-I----------------KDMVKDASQGISF 262 (403)
Q Consensus 204 PvVV~iHGGg~~~g~~~~~~---~~~~~La~~-G~~Vv~~dyR~~~~~~-~----------------~~~~~D~~~al~~ 262 (403)
..|+|..| +.|+-.++. .+.-.+|.+ +..+|-+++|.++++- + ...+.|....+..
T Consensus 81 gPIffYtG---NEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~ 157 (492)
T KOG2183|consen 81 GPIFFYTG---NEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTF 157 (492)
T ss_pred CceEEEeC---CcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHH
Confidence 45777777 444443322 233345555 8899999999876541 1 1347787777888
Q ss_pred HHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhc
Q 015669 263 VCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKET 301 (403)
Q Consensus 263 l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~ 301 (403)
+++.. +-....|+++|.|+||+++++.=+..+....
T Consensus 158 lK~~~---~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~ 193 (492)
T KOG2183|consen 158 LKRDL---SAEASPVIAFGGSYGGMLAAWFRLKYPHIVL 193 (492)
T ss_pred Hhhcc---ccccCcEEEecCchhhHHHHHHHhcChhhhh
Confidence 87763 4455799999999999999988776655443
No 186
>PF03283 PAE: Pectinacetylesterase
Probab=91.91 E-value=0.67 Score=46.65 Aligned_cols=40 Identities=18% Similarity=0.051 Sum_probs=31.3
Q ss_pred hHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHH
Q 015669 252 MVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294 (403)
Q Consensus 252 ~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~ 294 (403)
+...+.++++|+.++ .+ .++++|.|.|.|+||.-+...+-
T Consensus 136 G~~i~~avl~~l~~~--gl-~~a~~vlltG~SAGG~g~~~~~d 175 (361)
T PF03283_consen 136 GYRILRAVLDDLLSN--GL-PNAKQVLLTGCSAGGLGAILHAD 175 (361)
T ss_pred cHHHHHHHHHHHHHh--cC-cccceEEEeccChHHHHHHHHHH
Confidence 366778889999887 11 35789999999999999987653
No 187
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=91.83 E-value=0.65 Score=41.60 Aligned_cols=111 Identities=21% Similarity=0.237 Sum_probs=64.7
Q ss_pred CCCCcEEEEEcCCcccCCcccc--chHHHHHHHhCC-CeEEEecccCCCCCCch------hhHHHHHHHHHHHHHhhhhc
Q 015669 200 DGPKPVVAFITGGAWIIGYKAW--GSLLGQQLSERD-IIVACIDYRNFPQGTIK------DMVKDASQGISFVCNNISEY 270 (403)
Q Consensus 200 ~~~~PvVV~iHGGg~~~g~~~~--~~~~~~~La~~G-~~Vv~~dyR~~~~~~~~------~~~~D~~~al~~l~~~~~~~ 270 (403)
-...|||||-..||-....... -..++..+ +.| +...+++- +..++++. +.+.--.+.-+|+.+..-
T Consensus 24 HaG~pVvvFpts~Grf~eyed~G~v~ala~fi-e~G~vQlft~~g-ldsESf~a~h~~~adr~~rH~AyerYv~eEal-- 99 (227)
T COG4947 24 HAGIPVVVFPTSGGRFNEYEDFGMVDALASFI-EEGLVQLFTLSG-LDSESFLATHKNAADRAERHRAYERYVIEEAL-- 99 (227)
T ss_pred CCCCcEEEEecCCCcchhhhhcccHHHHHHHH-hcCcEEEEEecc-cchHhHhhhcCCHHHHHHHHHHHHHHHHHhhc--
Confidence 3467899998876543222221 12233333 445 33444441 12222222 122333344566665432
Q ss_pred CCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhh
Q 015669 271 GGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVD 331 (403)
Q Consensus 271 g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~ 331 (403)
|.+..+.|-||||..|+...+.. +..+..+|+++|.||..++..
T Consensus 100 ---pgs~~~sgcsmGayhA~nfvfrh--------------P~lftkvialSGvYdardffg 143 (227)
T COG4947 100 ---PGSTIVSGCSMGAYHAANFVFRH--------------PHLFTKVIALSGVYDARDFFG 143 (227)
T ss_pred ---CCCccccccchhhhhhhhhheeC--------------hhHhhhheeecceeeHHHhcc
Confidence 45688899999999999887765 456778899999999886544
No 188
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=91.80 E-value=0.85 Score=46.06 Aligned_cols=78 Identities=27% Similarity=0.519 Sum_probs=52.3
Q ss_pred cEEEEEcC-CcccCCccccchHHHHHHHhCCCeEEEec-ccCCCCCCch-hhHHHHHHHHHHHHHhhhhcCCCCCcEEEE
Q 015669 204 PVVAFITG-GAWIIGYKAWGSLLGQQLSERDIIVACID-YRNFPQGTIK-DMVKDASQGISFVCNNISEYGGDPDRIYLM 280 (403)
Q Consensus 204 PvVV~iHG-Gg~~~g~~~~~~~~~~~La~~G~~Vv~~d-yR~~~~~~~~-~~~~D~~~al~~l~~~~~~~g~d~~rI~l~ 280 (403)
-+-||+-| ||| ..-....+.+|+++|+.||.+| .|.+-...-| ..-.|..+.+++-..+ ++ ..++.|+
T Consensus 261 ~~av~~SGDGGW----r~lDk~v~~~l~~~gvpVvGvdsLRYfW~~rtPe~~a~Dl~r~i~~y~~~---w~--~~~~~li 331 (456)
T COG3946 261 TVAVFYSGDGGW----RDLDKEVAEALQKQGVPVVGVDSLRYFWSERTPEQIAADLSRLIRFYARR---WG--AKRVLLI 331 (456)
T ss_pred eEEEEEecCCch----hhhhHHHHHHHHHCCCceeeeehhhhhhccCCHHHHHHHHHHHHHHHHHh---hC--cceEEEE
Confidence 35566666 344 3445668899999999999998 3433222223 3356777777766553 33 4699999
Q ss_pred EcCchHHHHH
Q 015669 281 GQSAGAHIAA 290 (403)
Q Consensus 281 G~S~GG~la~ 290 (403)
|.|.|+.+-=
T Consensus 332 GySfGADvlP 341 (456)
T COG3946 332 GYSFGADVLP 341 (456)
T ss_pred eecccchhhH
Confidence 9999998754
No 189
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=91.67 E-value=0.31 Score=42.29 Aligned_cols=24 Identities=25% Similarity=0.308 Sum_probs=20.6
Q ss_pred CCCcEEEEEcCchHHHHHHHHHHH
Q 015669 273 DPDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 273 d~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
...+|.++|||+||.+|..++...
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~ 49 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDL 49 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHH
Confidence 347999999999999999888654
No 190
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=91.49 E-value=0.57 Score=43.34 Aligned_cols=60 Identities=20% Similarity=0.174 Sum_probs=43.8
Q ss_pred CCeEEEecccCCCCCCc------------hhhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHH
Q 015669 233 DIIVACIDYRNFPQGTI------------KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 233 G~~Vv~~dyR~~~~~~~------------~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
-..|++|=||-.....+ .....|+.+|.++-.++.. ++ +.++|+|||.|+.+...++.+.
T Consensus 45 ~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n--~G--RPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 45 VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYN--NG--RPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcC--CC--CCEEEEEeChHHHHHHHHHHHH
Confidence 46888999996322211 2347899999988777642 12 5899999999999999988654
No 191
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=91.35 E-value=2 Score=41.66 Aligned_cols=121 Identities=15% Similarity=0.165 Sum_probs=63.2
Q ss_pred EEEEEeeCCCCCCCcEEEEEcCCcccCCccccch-----HHHHHHHhCCCeEEEecccCCCCC--Cchhh-----HHHHH
Q 015669 190 RLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGS-----LLGQQLSERDIIVACIDYRNFPQG--TIKDM-----VKDAS 257 (403)
Q Consensus 190 ~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~-----~~~~~La~~G~~Vv~~dyR~~~~~--~~~~~-----~~D~~ 257 (403)
.+.+++--+.++++|++|=+|-=|- ..+.-+. .....+ .+.+.|+=+|..|..++ .++.. ++++.
T Consensus 10 ~v~V~v~G~~~~~kp~ilT~HDvGl--Nh~scF~~ff~~~~m~~i-~~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LA 86 (283)
T PF03096_consen 10 SVHVTVQGDPKGNKPAILTYHDVGL--NHKSCFQGFFNFEDMQEI-LQNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLA 86 (283)
T ss_dssp EEEEEEESS--TTS-EEEEE--TT----HHHHCHHHHCSHHHHHH-HTTSEEEEEE-TTTSTT-----TT-----HHHHH
T ss_pred EEEEEEEecCCCCCceEEEeccccc--cchHHHHHHhcchhHHHH-hhceEEEEEeCCCCCCCcccccccccccCHHHHH
Confidence 3666665554557999999999442 2222011 222333 45799999999885443 22221 34444
Q ss_pred HHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCChhhhhhh
Q 015669 258 QGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDH 332 (403)
Q Consensus 258 ~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d~~~~~~~ 332 (403)
+.+..| +..|++ +.++-+|--+||++-+..|+.. +..+.++|.+.....-..+.++
T Consensus 87 e~l~~V---l~~f~l--k~vIg~GvGAGAnIL~rfAl~~--------------p~~V~GLiLvn~~~~~~gw~Ew 142 (283)
T PF03096_consen 87 EMLPEV---LDHFGL--KSVIGFGVGAGANILARFALKH--------------PERVLGLILVNPTCTAAGWMEW 142 (283)
T ss_dssp CTHHHH---HHHHT-----EEEEEETHHHHHHHHHHHHS--------------GGGEEEEEEES---S---HHHH
T ss_pred HHHHHH---HHhCCc--cEEEEEeeccchhhhhhccccC--------------ccceeEEEEEecCCCCccHHHH
Confidence 444444 444566 4799999999999999999876 4566777776654443333343
No 192
>PLN02408 phospholipase A1
Probab=91.01 E-value=0.37 Score=48.36 Aligned_cols=38 Identities=24% Similarity=0.368 Sum_probs=28.1
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHH
Q 015669 259 GISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 259 al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
.++.+++.++++.....+|++.|||+||.+|..++..-
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 34555555556654445799999999999999888754
No 193
>PLN02761 lipase class 3 family protein
Probab=90.79 E-value=1.3 Score=46.34 Aligned_cols=38 Identities=24% Similarity=0.271 Sum_probs=27.0
Q ss_pred HHHHHHHhhhhc----CCCCCcEEEEEcCchHHHHHHHHHHH
Q 015669 259 GISFVCNNISEY----GGDPDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 259 al~~l~~~~~~~----g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
.+..|+..++.+ .....+|++.|||+||.+|...+..-
T Consensus 274 Vl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DI 315 (527)
T PLN02761 274 VLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDI 315 (527)
T ss_pred HHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHH
Confidence 445555555555 22335899999999999999888654
No 194
>PLN02454 triacylglycerol lipase
Probab=90.45 E-value=0.47 Score=48.36 Aligned_cols=38 Identities=21% Similarity=0.290 Sum_probs=26.2
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHH
Q 015669 259 GISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 259 al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
.+..+++.++++....-+|++.|||+||.+|+..|..-
T Consensus 212 vl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di 249 (414)
T PLN02454 212 LLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDI 249 (414)
T ss_pred HHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHH
Confidence 34445554555543323699999999999999888654
No 195
>PLN02606 palmitoyl-protein thioesterase
Probab=90.39 E-value=1.9 Score=42.18 Aligned_cols=22 Identities=14% Similarity=0.122 Sum_probs=17.6
Q ss_pred CcEEEEEcCchHHHHHHHHHHH
Q 015669 275 DRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 275 ~rI~l~G~S~GG~la~~~a~~~ 296 (403)
+-+.++|+|.||.++-.++-..
T Consensus 95 ~G~naIGfSQGglflRa~ierc 116 (306)
T PLN02606 95 EGYNIVAESQGNLVARGLIEFC 116 (306)
T ss_pred CceEEEEEcchhHHHHHHHHHC
Confidence 4689999999999988666543
No 196
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=88.93 E-value=1.5 Score=42.40 Aligned_cols=102 Identities=15% Similarity=0.208 Sum_probs=44.2
Q ss_pred CCCcEEEEEcCCcccCCccccchHHHHHHHhC--CCeEEEecccCCCCCCc----hhhHHHHHHHHHHHHHhhh---hcC
Q 015669 201 GPKPVVAFITGGAWIIGYKAWGSLLGQQLSER--DIIVACIDYRNFPQGTI----KDMVKDASQGISFVCNNIS---EYG 271 (403)
Q Consensus 201 ~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~--G~~Vv~~dyR~~~~~~~----~~~~~D~~~al~~l~~~~~---~~g 271 (403)
.++| ||+.||=|-..++...+..+...+.+. |.-|.+++- +. +.. .....++..-++.+++.+. ++.
T Consensus 4 ~~~P-vViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i--g~-~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~ 79 (279)
T PF02089_consen 4 SPLP-VVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI--GN-DPSEDVENSFFGNVNDQVEQVCEQLANDPELA 79 (279)
T ss_dssp SS---EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S--SS-SHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGT
T ss_pred CCCc-EEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE--CC-CcchhhhhhHHHHHHHHHHHHHHHHhhChhhh
Confidence 3445 556699442222222333343333332 877877753 11 111 1122233333333443333 221
Q ss_pred CCCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeecc
Q 015669 272 GDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSG 322 (403)
Q Consensus 272 ~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg 322 (403)
+-+.++|+|.||.+.-.++-.. ....++.+|.++|
T Consensus 80 ---~G~~~IGfSQGgl~lRa~vq~c-------------~~~~V~nlISlgg 114 (279)
T PF02089_consen 80 ---NGFNAIGFSQGGLFLRAYVQRC-------------NDPPVHNLISLGG 114 (279)
T ss_dssp ---T-EEEEEETCHHHHHHHHHHH--------------TSS-EEEEEEES-
T ss_pred ---cceeeeeeccccHHHHHHHHHC-------------CCCCceeEEEecC
Confidence 5799999999999988766543 1246777777654
No 197
>PLN02633 palmitoyl protein thioesterase family protein
Probab=88.91 E-value=3.7 Score=40.27 Aligned_cols=89 Identities=15% Similarity=0.068 Sum_probs=43.9
Q ss_pred CCcEEEEEcCCcccCCccccchHHHHHHHhC-CCeEEEecccCCCCCCchhhHHHH-HHHHHHHHHhhhhcCCCCCcEEE
Q 015669 202 PKPVVAFITGGAWIIGYKAWGSLLGQQLSER-DIIVACIDYRNFPQGTIKDMVKDA-SQGISFVCNNISEYGGDPDRIYL 279 (403)
Q Consensus 202 ~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~-G~~Vv~~dyR~~~~~~~~~~~~D~-~~al~~l~~~~~~~g~d~~rI~l 279 (403)
+.|+ |+.||-|=...+ .....+.+.+.+. |.-|.++.--......+-..+.++ ..+.+.+.. ..++ .+-+.+
T Consensus 25 ~~P~-ViwHG~GD~c~~-~g~~~~~~l~~~~~g~~~~~i~ig~~~~~s~~~~~~~Qve~vce~l~~-~~~l---~~G~na 98 (314)
T PLN02633 25 SVPF-IMLHGIGTQCSD-ATNANFTQLLTNLSGSPGFCLEIGNGVGDSWLMPLTQQAEIACEKVKQ-MKEL---SQGYNI 98 (314)
T ss_pred CCCe-EEecCCCcccCC-chHHHHHHHHHhCCCCceEEEEECCCccccceeCHHHHHHHHHHHHhh-chhh---hCcEEE
Confidence 4555 556994432222 2344455555443 777766543211111221112222 222222322 2222 246899
Q ss_pred EEcCchHHHHHHHHHHH
Q 015669 280 MGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 280 ~G~S~GG~la~~~a~~~ 296 (403)
+|+|.||.++-.++-..
T Consensus 99 IGfSQGGlflRa~ierc 115 (314)
T PLN02633 99 VGRSQGNLVARGLIEFC 115 (314)
T ss_pred EEEccchHHHHHHHHHC
Confidence 99999999988666443
No 198
>PLN02571 triacylglycerol lipase
Probab=88.90 E-value=0.64 Score=47.41 Aligned_cols=38 Identities=21% Similarity=0.281 Sum_probs=26.4
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHH
Q 015669 259 GISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 259 al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
.+..|++.++.+....-+|++.|||+||.+|...|..-
T Consensus 210 vl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl 247 (413)
T PLN02571 210 VLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVDI 247 (413)
T ss_pred HHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHHH
Confidence 44455554554433323799999999999999888754
No 199
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=88.75 E-value=1.1 Score=47.52 Aligned_cols=67 Identities=16% Similarity=0.170 Sum_probs=37.9
Q ss_pred hHHHHHHHhCCCe-----EEEecccCCCCCCc--hhhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHH
Q 015669 223 SLLGQQLSERDII-----VACIDYRNFPQGTI--KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294 (403)
Q Consensus 223 ~~~~~~La~~G~~-----Vv~~dyR~~~~~~~--~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~ 294 (403)
..+.+.|++.||. ....|+|+++...- ......+...++.+.+ .+. -++|+|+||||||.++...+.
T Consensus 159 ~kLIe~L~~iGY~~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~----~ng-gkKVVLV~HSMGglv~lyFL~ 232 (642)
T PLN02517 159 AVLIANLARIGYEEKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVA----TNG-GKKVVVVPHSMGVLYFLHFMK 232 (642)
T ss_pred HHHHHHHHHcCCCCCceeecccccccCccchhhhhHHHHHHHHHHHHHHH----HcC-CCeEEEEEeCCchHHHHHHHH
Confidence 5677889888875 33445555432110 1112222233332222 122 269999999999999987664
No 200
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=88.40 E-value=1.7 Score=38.40 Aligned_cols=72 Identities=14% Similarity=0.141 Sum_probs=40.8
Q ss_pred cccchHHHHHHHhCCCeEEEecccCCCCC-CchhhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHH
Q 015669 219 KAWGSLLGQQLSERDIIVACIDYRNFPQG-TIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLE 295 (403)
Q Consensus 219 ~~~~~~~~~~La~~G~~Vv~~dyR~~~~~-~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~ 295 (403)
...+..+...|. .++.|+.+|+++.... .....+.+. .+.+.+.+... ....++.++|||+||.++...+..
T Consensus 12 ~~~~~~~~~~l~-~~~~v~~~~~~g~~~~~~~~~~~~~~---~~~~~~~l~~~-~~~~~~~l~g~s~Gg~~a~~~a~~ 84 (212)
T smart00824 12 PHEYARLAAALR-GRRDVSALPLPGFGPGEPLPASADAL---VEAQAEAVLRA-AGGRPFVLVGHSSGGLLAHAVAAR 84 (212)
T ss_pred HHHHHHHHHhcC-CCccEEEecCCCCCCCCCCCCCHHHH---HHHHHHHHHHh-cCCCCeEEEEECHHHHHHHHHHHH
Confidence 334455555554 3688999998876433 222222322 22222212111 123579999999999999877764
No 201
>PLN02802 triacylglycerol lipase
Probab=88.30 E-value=0.71 Score=48.05 Aligned_cols=38 Identities=26% Similarity=0.261 Sum_probs=27.3
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHH
Q 015669 259 GISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 259 al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
.++-|++.++++....-+|+|.|||+||.+|..++..-
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 34445555555554445899999999999999887654
No 202
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=88.15 E-value=4.2 Score=36.59 Aligned_cols=85 Identities=21% Similarity=0.202 Sum_probs=39.7
Q ss_pred EEEEcCCcccCCccccchHHHHHHHhC-C---CeEEEecccCCCCC-Cchh----hHHHHHHHHHHHHHhhhhcCCCCCc
Q 015669 206 VAFITGGAWIIGYKAWGSLLGQQLSER-D---IIVACIDYRNFPQG-TIKD----MVKDASQGISFVCNNISEYGGDPDR 276 (403)
Q Consensus 206 VV~iHGGg~~~g~~~~~~~~~~~La~~-G---~~Vv~~dyR~~~~~-~~~~----~~~D~~~al~~l~~~~~~~g~d~~r 276 (403)
||+..|-+...|.......+...+.+. | +.+..++|.-.... .+.. ...++...++..... -...+
T Consensus 8 vi~aRGT~E~~g~~~~g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~~y~~S~~~G~~~~~~~i~~~~~~-----CP~~k 82 (179)
T PF01083_consen 8 VIFARGTGEPPGVGRVGPPFADALQAQPGGTSVAVQGVEYPASLGPNSYGDSVAAGVANLVRLIEEYAAR-----CPNTK 82 (179)
T ss_dssp EEEE--TTSSTTTCCCHHHHHHHHHHHCTTCEEEEEE--S---SCGGSCHHHHHHHHHHHHHHHHHHHHH-----STTSE
T ss_pred EEEecCCCCCCCCccccHHHHHHHHhhcCCCeeEEEecCCCCCCCcccccccHHHHHHHHHHHHHHHHHh-----CCCCC
Confidence 445555433322222223444555543 4 55556778654333 1221 233333333322222 12259
Q ss_pred EEEEEcCchHHHHHHHHHH
Q 015669 277 IYLMGQSAGAHIAACTLLE 295 (403)
Q Consensus 277 I~l~G~S~GG~la~~~a~~ 295 (403)
|.|+|.|.||.++..++..
T Consensus 83 ivl~GYSQGA~V~~~~~~~ 101 (179)
T PF01083_consen 83 IVLAGYSQGAMVVGDALSG 101 (179)
T ss_dssp EEEEEETHHHHHHHHHHHH
T ss_pred EEEEecccccHHHHHHHHh
Confidence 9999999999999988765
No 203
>PLN02324 triacylglycerol lipase
Probab=87.96 E-value=0.84 Score=46.53 Aligned_cols=36 Identities=17% Similarity=0.187 Sum_probs=25.0
Q ss_pred HHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHH
Q 015669 261 SFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 261 ~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
.-|++.++.+....-+|++.|||+||.+|...|..-
T Consensus 201 ~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~dl 236 (415)
T PLN02324 201 GELKRLLELYKNEEISITFTGHSLGAVMSVLSAADL 236 (415)
T ss_pred HHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHHH
Confidence 334444444433334799999999999999888654
No 204
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=87.73 E-value=0.87 Score=42.32 Aligned_cols=23 Identities=26% Similarity=0.381 Sum_probs=20.0
Q ss_pred CCcEEEEEcCchHHHHHHHHHHH
Q 015669 274 PDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 274 ~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
..+|.+.|||+||.+|..+++.-
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHH
Confidence 36899999999999999888754
No 205
>PLN02753 triacylglycerol lipase
Probab=86.57 E-value=1 Score=47.11 Aligned_cols=38 Identities=24% Similarity=0.242 Sum_probs=28.0
Q ss_pred HHHHHHHhhhhcCCC---CCcEEEEEcCchHHHHHHHHHHH
Q 015669 259 GISFVCNNISEYGGD---PDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 259 al~~l~~~~~~~g~d---~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
.+..|+..++.+..+ .-+|++.|||+||.+|..+|..-
T Consensus 293 Vl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dl 333 (531)
T PLN02753 293 ILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDI 333 (531)
T ss_pred HHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHH
Confidence 455566656555432 35999999999999999888654
No 206
>PLN02310 triacylglycerol lipase
Probab=85.99 E-value=1.1 Score=45.47 Aligned_cols=37 Identities=22% Similarity=0.259 Sum_probs=24.9
Q ss_pred HHHHHHHhhhhcC--CCCCcEEEEEcCchHHHHHHHHHH
Q 015669 259 GISFVCNNISEYG--GDPDRIYLMGQSAGAHIAACTLLE 295 (403)
Q Consensus 259 al~~l~~~~~~~g--~d~~rI~l~G~S~GG~la~~~a~~ 295 (403)
+++-+++..+.+. ....+|++.|||+||.+|...+..
T Consensus 191 Vl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 191 VMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 3344444444332 223589999999999999988865
No 207
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=85.78 E-value=2.5 Score=43.65 Aligned_cols=21 Identities=19% Similarity=0.305 Sum_probs=19.1
Q ss_pred CcEEEEEeCCCCCCCHHHHHH
Q 015669 375 PPIILFHGTADYSIPADARIL 395 (403)
Q Consensus 375 pPvLIiHG~~D~vVP~~~S~~ 395 (403)
-++||..|+.|-+||+-..+.
T Consensus 348 irVLiY~Gd~D~icn~~Gt~~ 368 (433)
T PLN03016 348 YRSLIYSGDHDIAVPFLATQA 368 (433)
T ss_pred ceEEEEECCccccCCcHhHHH
Confidence 499999999999999988876
No 208
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=85.71 E-value=4.1 Score=42.29 Aligned_cols=86 Identities=17% Similarity=0.072 Sum_probs=55.4
Q ss_pred CCCcEEEEEcCCcccCCccc-cchHHHHHHHhCCCeEEE-ecccCCCCCCch--hhHHHHHHHHHHHHHhhhhcCCCCCc
Q 015669 201 GPKPVVAFITGGAWIIGYKA-WGSLLGQQLSERDIIVAC-IDYRNFPQGTIK--DMVKDASQGISFVCNNISEYGGDPDR 276 (403)
Q Consensus 201 ~~~PvVV~iHGGg~~~g~~~-~~~~~~~~La~~G~~Vv~-~dyR~~~~~~~~--~~~~D~~~al~~l~~~~~~~g~d~~r 276 (403)
-+-|+.|||-| ...... +...+.+. -|...+. -|-|+-++.+.- +.++ ...++-+++.++..|.+.+.
T Consensus 287 ~KPPL~VYFSG---yR~aEGFEgy~MMk~---Lg~PfLL~~DpRleGGaFYlGs~eyE--~~I~~~I~~~L~~LgF~~~q 358 (511)
T TIGR03712 287 FKPPLNVYFSG---YRPAEGFEGYFMMKR---LGAPFLLIGDPRLEGGAFYLGSDEYE--QGIINVIQEKLDYLGFDHDQ 358 (511)
T ss_pred CCCCeEEeecc---CcccCcchhHHHHHh---cCCCeEEeeccccccceeeeCcHHHH--HHHHHHHHHHHHHhCCCHHH
Confidence 34589999999 222111 12222222 2555554 478876665543 2232 23456667777788999999
Q ss_pred EEEEEcCchHHHHHHHHH
Q 015669 277 IYLMGQSAGAHIAACTLL 294 (403)
Q Consensus 277 I~l~G~S~GG~la~~~a~ 294 (403)
++|.|-|||..-|+..+.
T Consensus 359 LILSGlSMGTfgAlYYga 376 (511)
T TIGR03712 359 LILSGLSMGTFGALYYGA 376 (511)
T ss_pred eeeccccccchhhhhhcc
Confidence 999999999999988764
No 209
>PLN03037 lipase class 3 family protein; Provisional
Probab=84.79 E-value=1.4 Score=46.08 Aligned_cols=37 Identities=19% Similarity=0.271 Sum_probs=24.9
Q ss_pred HHHHHHhhhhcC--CCCCcEEEEEcCchHHHHHHHHHHH
Q 015669 260 ISFVCNNISEYG--GDPDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 260 l~~l~~~~~~~g--~d~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
+.-|++.++.+. ...-+|+|.|||+||.+|...|..-
T Consensus 301 l~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DI 339 (525)
T PLN03037 301 MEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEA 339 (525)
T ss_pred HHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHH
Confidence 334444444332 2335799999999999999888653
No 210
>PLN02719 triacylglycerol lipase
Probab=84.73 E-value=1.4 Score=45.96 Aligned_cols=38 Identities=24% Similarity=0.364 Sum_probs=26.9
Q ss_pred HHHHHHHhhhhcC---CCCCcEEEEEcCchHHHHHHHHHHH
Q 015669 259 GISFVCNNISEYG---GDPDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 259 al~~l~~~~~~~g---~d~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
.+..|++.++.+. +..-+|++.|||+||.+|..+|..-
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl 319 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDV 319 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHH
Confidence 4455555555553 2345899999999999999888654
No 211
>PLN02209 serine carboxypeptidase
Probab=83.19 E-value=4 Score=42.21 Aligned_cols=41 Identities=12% Similarity=0.127 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhhhhcC-CCCCcEEEEEcCchHHHHHHHHH
Q 015669 254 KDASQGISFVCNNISEYG-GDPDRIYLMGQSAGAHIAACTLL 294 (403)
Q Consensus 254 ~D~~~al~~l~~~~~~~g-~d~~rI~l~G~S~GG~la~~~a~ 294 (403)
.++.+..++++.-...|. ...++++|+|+|+||+-+-.++.
T Consensus 145 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~ 186 (437)
T PLN02209 145 SEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVH 186 (437)
T ss_pred HHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHH
Confidence 344455555555544442 23458999999999987765554
No 212
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=82.46 E-value=2.7 Score=43.70 Aligned_cols=44 Identities=18% Similarity=0.212 Sum_probs=34.5
Q ss_pred hhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHH
Q 015669 251 DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294 (403)
Q Consensus 251 ~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~ 294 (403)
..-.|+...++.+.+...++.-.-.+.+|+|+|+||+=+..+|.
T Consensus 174 ~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~ 217 (498)
T COG2939 174 GAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAH 217 (498)
T ss_pred ccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHH
Confidence 34678888888888877766554568999999999998776654
No 213
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=81.50 E-value=4.2 Score=41.96 Aligned_cols=70 Identities=14% Similarity=0.068 Sum_probs=39.1
Q ss_pred chHHHHHHHhCCCe------EEEecccCCCCCCchhhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHH
Q 015669 222 GSLLGQQLSERDII------VACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294 (403)
Q Consensus 222 ~~~~~~~La~~G~~------Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~ 294 (403)
+..+.+.|+.-||. -+..|+|++.... ...++...-++-..+..-+..+. ++|+|++||||+.+.++.+.
T Consensus 126 w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~--e~rd~yl~kLK~~iE~~~~~~G~-kkVvlisHSMG~l~~lyFl~ 201 (473)
T KOG2369|consen 126 WHELIENLVGIGYERGKTLFGAPYDWRLSYHNS--EERDQYLSKLKKKIETMYKLNGG-KKVVLISHSMGGLYVLYFLK 201 (473)
T ss_pred HHHHHHHHHhhCcccCceeeccccchhhccCCh--hHHHHHHHHHHHHHHHHHHHcCC-CceEEEecCCccHHHHHHHh
Confidence 44566777777776 3457778754221 11222222222222222222221 69999999999999987764
No 214
>PLN02847 triacylglycerol lipase
Probab=79.84 E-value=2.5 Score=44.96 Aligned_cols=21 Identities=29% Similarity=0.262 Sum_probs=18.5
Q ss_pred CcEEEEEcCchHHHHHHHHHH
Q 015669 275 DRIYLMGQSAGAHIAACTLLE 295 (403)
Q Consensus 275 ~rI~l~G~S~GG~la~~~a~~ 295 (403)
-+|.+.|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 489999999999999988654
No 215
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=79.73 E-value=8.5 Score=39.95 Aligned_cols=21 Identities=14% Similarity=0.330 Sum_probs=19.3
Q ss_pred CcEEEEEeCCCCCCCHHHHHH
Q 015669 375 PPIILFHGTADYSIPADARIL 395 (403)
Q Consensus 375 pPvLIiHG~~D~vVP~~~S~~ 395 (403)
-++||..|+.|-+||+-..+.
T Consensus 364 ~rvliysGD~D~~~p~~gt~~ 384 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQA 384 (454)
T ss_pred eEEEEEeCCcceeCcchhhHH
Confidence 489999999999999988886
No 216
>PLN00413 triacylglycerol lipase
Probab=76.87 E-value=4.1 Score=42.28 Aligned_cols=21 Identities=24% Similarity=0.279 Sum_probs=18.6
Q ss_pred CcEEEEEcCchHHHHHHHHHH
Q 015669 275 DRIYLMGQSAGAHIAACTLLE 295 (403)
Q Consensus 275 ~rI~l~G~S~GG~la~~~a~~ 295 (403)
.+|.+.|||+||++|..++..
T Consensus 284 ~kliVTGHSLGGALAtLaA~~ 304 (479)
T PLN00413 284 SKFILSGHSLGGALAILFTAV 304 (479)
T ss_pred CeEEEEecCHHHHHHHHHHHH
Confidence 589999999999999988754
No 217
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=76.70 E-value=3.6 Score=33.43 Aligned_cols=23 Identities=30% Similarity=0.507 Sum_probs=21.1
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHH
Q 015669 374 LPPIILFHGTADYSIPADARILQ 396 (403)
Q Consensus 374 ~pPvLIiHG~~D~vVP~~~S~~l 396 (403)
.+|+|++.++.|++.|++.++.+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~ 56 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAM 56 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHH
Confidence 47999999999999999999974
No 218
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=75.09 E-value=4.3 Score=34.05 Aligned_cols=44 Identities=23% Similarity=0.237 Sum_probs=28.7
Q ss_pred EEEEeeCCCCCCCcEEEEEcCCcccCCc---------------------cccchHHHHHHHhCCCeEEEe
Q 015669 191 LDLYFPKSSDGPKPVVAFITGGAWIIGY---------------------KAWGSLLGQQLSERDIIVACI 239 (403)
Q Consensus 191 l~vy~P~~~~~~~PvVV~iHGGg~~~g~---------------------~~~~~~~~~~La~~G~~Vv~~ 239 (403)
.|++.|+ +.++||+||..|..-. ..........|.+.|+.|+.+
T Consensus 49 pD~~~~~-----~klaIfVDGcfWHgh~c~~~~~pk~n~~fW~~Ki~~n~~rD~~~~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 49 PDIVFDE-----YRCVIFIHGCFWHGHHCYLGKVPKTRTDFWSPKIEKNVERDRRVNSRLQELGWRVLRV 113 (117)
T ss_pred ccEEecC-----CCEEEEEcccccccCCcccccCCCccHHHHHHHHHHHHHHHHHHHHHHHHCcCEEEEE
Confidence 5677663 4699999998776311 111222345677889999876
No 219
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=74.78 E-value=13 Score=34.95 Aligned_cols=64 Identities=20% Similarity=0.274 Sum_probs=37.9
Q ss_pred CCeEEEecccC--CCCCCch--hhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHH
Q 015669 233 DIIVACIDYRN--FPQGTIK--DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 233 G~~Vv~~dyR~--~~~~~~~--~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
|+.+..++|.. .|...+. ..-+.+..+.+-+.+.+.++....++++|+|.|.||.++...+.+.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHH
Confidence 56777787764 2211111 1123333444445444444333557999999999999998877554
No 220
>PLN02162 triacylglycerol lipase
Probab=74.68 E-value=5 Score=41.58 Aligned_cols=21 Identities=29% Similarity=0.216 Sum_probs=18.3
Q ss_pred CcEEEEEcCchHHHHHHHHHH
Q 015669 275 DRIYLMGQSAGAHIAACTLLE 295 (403)
Q Consensus 275 ~rI~l~G~S~GG~la~~~a~~ 295 (403)
.++.+.|||+||.+|..++..
T Consensus 278 ~kliVTGHSLGGALAtLaAa~ 298 (475)
T PLN02162 278 LKYILTGHSLGGALAALFPAI 298 (475)
T ss_pred ceEEEEecChHHHHHHHHHHH
Confidence 589999999999999987653
No 221
>PLN02934 triacylglycerol lipase
Probab=74.18 E-value=6.1 Score=41.34 Aligned_cols=21 Identities=19% Similarity=0.221 Sum_probs=18.7
Q ss_pred CcEEEEEcCchHHHHHHHHHH
Q 015669 275 DRIYLMGQSAGAHIAACTLLE 295 (403)
Q Consensus 275 ~rI~l~G~S~GG~la~~~a~~ 295 (403)
.+|.+.|||+||.+|..++..
T Consensus 321 ~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 321 AKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred CeEEEeccccHHHHHHHHHHH
Confidence 589999999999999988754
No 222
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=73.13 E-value=23 Score=37.05 Aligned_cols=108 Identities=15% Similarity=0.193 Sum_probs=62.7
Q ss_pred ceEEEEEeeCCCCCCCcEEEEEcCCcccCCccccch-HHHHHHHhCCCeEEEecccCCCCC-----Cc---hhh------
Q 015669 188 RNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGS-LLGQQLSERDIIVACIDYRNFPQG-----TI---KDM------ 252 (403)
Q Consensus 188 ~~~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~~~-~~~~~La~~G~~Vv~~dyR~~~~~-----~~---~~~------ 252 (403)
.+...+|+|.+-++ -++.+=||||..+-..... .....-.++||+++.-|-=-.... .+ +..
T Consensus 16 ~i~fev~LP~~WNg---R~~~~GgGG~~G~i~~~~~~~~~~~~~~~G~A~~~TD~Gh~~~~~~~~~~~~~n~~~~~dfa~ 92 (474)
T PF07519_consen 16 NIRFEVWLPDNWNG---RFLQVGGGGFAGGINYADGKASMATALARGYATASTDSGHQGSAGSDDASFGNNPEALLDFAY 92 (474)
T ss_pred eEEEEEECChhhcc---CeEEECCCeeeCcccccccccccchhhhcCeEEEEecCCCCCCcccccccccCCHHHHHHHHh
Confidence 56789999985433 4667777777543222110 001223467999999984221110 11 111
Q ss_pred --HHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHh
Q 015669 253 --VKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKE 300 (403)
Q Consensus 253 --~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~ 300 (403)
+.+...+-+.|.+. -||..|++-+..|-|-||--++..|.+.+...
T Consensus 93 ra~h~~~~~aK~l~~~--~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~df 140 (474)
T PF07519_consen 93 RALHETTVVAKALIEA--FYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDF 140 (474)
T ss_pred hHHHHHHHHHHHHHHH--HhCCCCCceEEEEeCCCcchHHHHHHhChhhc
Confidence 22222222333222 25778999999999999999999887764443
No 223
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=72.86 E-value=60 Score=29.28 Aligned_cols=24 Identities=17% Similarity=0.372 Sum_probs=19.7
Q ss_pred CCCCcEEEEEcCchHHHHHHHHHH
Q 015669 272 GDPDRIYLMGQSAGAHIAACTLLE 295 (403)
Q Consensus 272 ~d~~rI~l~G~S~GG~la~~~a~~ 295 (403)
....+++++|||+|..++..++..
T Consensus 106 ~~~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 106 GPDAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred CCCCCEEEEEecchhHHHHHHhhh
Confidence 344699999999999999877654
No 224
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=72.60 E-value=38 Score=35.43 Aligned_cols=93 Identities=14% Similarity=0.086 Sum_probs=55.3
Q ss_pred CCCcEEEEEcCCcccCCcc--ccchHHHHHHHhC-CCeEEEecccCCCCCC----ch----------hhHHHHHHHHHHH
Q 015669 201 GPKPVVAFITGGAWIIGYK--AWGSLLGQQLSER-DIIVACIDYRNFPQGT----IK----------DMVKDASQGISFV 263 (403)
Q Consensus 201 ~~~PvVV~iHGGg~~~g~~--~~~~~~~~~La~~-G~~Vv~~dyR~~~~~~----~~----------~~~~D~~~al~~l 263 (403)
...|+-++|-|-|-..... .....+. .+|++ |-.|+.+++|.++... .. .++.|+...++.+
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~-~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWL-QWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHH-HHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 3457777776644322111 1122333 34444 9999999999977431 11 2355655554444
Q ss_pred HHhhhhcCC-CCCcEEEEEcCchHHHHHHHHHHHH
Q 015669 264 CNNISEYGG-DPDRIYLMGQSAGAHIAACTLLEQA 297 (403)
Q Consensus 264 ~~~~~~~g~-d~~rI~l~G~S~GG~la~~~a~~~~ 297 (403)
.. +++. |+.+.+.+|-|+-|.++++.=...+
T Consensus 163 n~---k~n~~~~~~WitFGgSYsGsLsAW~R~~yP 194 (514)
T KOG2182|consen 163 NA---KFNFSDDSKWITFGGSYSGSLSAWFREKYP 194 (514)
T ss_pred Hh---hcCCCCCCCeEEECCCchhHHHHHHHHhCc
Confidence 33 3443 3359999999999999987655443
No 225
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=72.31 E-value=5 Score=39.94 Aligned_cols=23 Identities=26% Similarity=0.447 Sum_probs=19.9
Q ss_pred CcEEEEEcCchHHHHHHHHHHHH
Q 015669 275 DRIYLMGQSAGAHIAACTLLEQA 297 (403)
Q Consensus 275 ~rI~l~G~S~GG~la~~~a~~~~ 297 (403)
-+|.+.|||+||.+|..++..-.
T Consensus 171 ~~i~vTGHSLGgAlA~laa~~i~ 193 (336)
T KOG4569|consen 171 YSIWVTGHSLGGALASLAALDLV 193 (336)
T ss_pred cEEEEecCChHHHHHHHHHHHHH
Confidence 58999999999999998886543
No 226
>PF03991 Prion_octapep: Copper binding octapeptide repeat; InterPro: IPR020949 Prion protein (PrP-c) [, , ] is a small glycoprotein found in high quantity in the brain of animals infected with certain degenerative neurological diseases, such as sheep scrapie and bovine spongiform encephalopathy (BSE), and the human dementias Creutzfeldt-Jacob disease (CJD) and Gerstmann-Straussler syndrome (GSS). PrP-c is encoded in the host genome and is expressed both in normal and infected cells. During infection, however, the PrP-c molecule become altered (conformationally rather than at the amino acid level) to an abnormal isoform, PrP-sc. In detergent-treated brain extracts from infected individuals, fibrils composed of polymers of PrP-sc, namely scrapie-associated fibrils or prion rods, can be evidenced by electron microscopy. The precise function of the normal PrP isoform in healthy individuals remains unknown. Several results, mainly obtained in transgenic animals, indicate that PrP-c might play a role in long-term potentiation, in sleep physiology, in oxidative burst compensation (PrP can fix four Cu2+ through its octarepeat domain), in interactions with the extracellular matrix (PrP-c can bind to the precursor of the laminin receptor, LRP), in apoptosis and in signal transduction (costimulation of PrP-c induces a modulation of Fyn kinase phosphorylation) []. The normal isoform, PrP-c, is anchored at the cell membrane, in rafts, through a glycosyl phosphatidyl inositol (GPI); its half-life at the cell surface is 5 h, after which the protein is internalised through a caveolae-dependent mechanism and degraded in the endolysosome compartment. Conversion between PrP-c and PrP-sc occurs likely during the internalisation process. This repeat is found at the amino terminus of mammalian prion proteins. It has been shown to bind to copper [].
Probab=70.80 E-value=1.9 Score=18.69 Aligned_cols=6 Identities=50% Similarity=1.282 Sum_probs=4.8
Q ss_pred cCCccc
Q 015669 210 TGGAWI 215 (403)
Q Consensus 210 HGGg~~ 215 (403)
|||+|.
T Consensus 2 hgG~Wg 7 (8)
T PF03991_consen 2 HGGGWG 7 (8)
T ss_pred CCCcCC
Confidence 898884
No 227
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=69.55 E-value=57 Score=32.43 Aligned_cols=37 Identities=32% Similarity=0.448 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHH
Q 015669 253 VKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTL 293 (403)
Q Consensus 253 ~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a 293 (403)
...+..|..++..+.+ -+ ++|+++|+|-|+.+|-.+|
T Consensus 104 ~~nI~~AYrFL~~~ye--pG--D~Iy~FGFSRGAf~aRVla 140 (423)
T COG3673 104 VQNIREAYRFLIFNYE--PG--DEIYAFGFSRGAFSARVLA 140 (423)
T ss_pred HHHHHHHHHHHHHhcC--CC--CeEEEeeccchhHHHHHHH
Confidence 4566777788777654 23 5999999999999986655
No 228
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=68.92 E-value=18 Score=36.45 Aligned_cols=108 Identities=12% Similarity=0.091 Sum_probs=66.0
Q ss_pred EEEEeeCCCCCC-CcEEEEEcCCcccCCccccchHHHHHHHhC---------CCeEEEecccCCCCCCchhh-HHHHHHH
Q 015669 191 LDLYFPKSSDGP-KPVVAFITGGAWIIGYKAWGSLLGQQLSER---------DIIVACIDYRNFPQGTIKDM-VKDASQG 259 (403)
Q Consensus 191 l~vy~P~~~~~~-~PvVV~iHGGg~~~g~~~~~~~~~~~La~~---------G~~Vv~~dyR~~~~~~~~~~-~~D~~~a 259 (403)
+++-.|+...++ .-.++.+|| | -|+-.++..+...|-+. -|.|+++...|++.+.-+.- -..+.+.
T Consensus 139 lhvk~p~~k~~k~v~PlLl~HG--w-PGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~~a~ 215 (469)
T KOG2565|consen 139 LHVKPPQKKKKKKVKPLLLLHG--W-PGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNAAAT 215 (469)
T ss_pred EEecCCccccCCcccceEEecC--C-CchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCccHHHH
Confidence 455555432222 235788999 3 55554444444444332 37899999888776654421 1233444
Q ss_pred HHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHHhcCC
Q 015669 260 ISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGE 303 (403)
Q Consensus 260 l~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~ 303 (403)
.+-+++..-+.|. ++..|-|.-.|..++..++.-.+....+.
T Consensus 216 ArvmrkLMlRLg~--nkffiqGgDwGSiI~snlasLyPenV~Gl 257 (469)
T KOG2565|consen 216 ARVMRKLMLRLGY--NKFFIQGGDWGSIIGSNLASLYPENVLGL 257 (469)
T ss_pred HHHHHHHHHHhCc--ceeEeecCchHHHHHHHHHhhcchhhhHh
Confidence 4555555555565 58999888899999999987766655544
No 229
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=68.39 E-value=4.6 Score=40.90 Aligned_cols=88 Identities=18% Similarity=0.218 Sum_probs=45.1
Q ss_pred CCCCcEEEEEcCCcccCC-ccccchHHHHHHHhC--CCeEEEecccCCCCCCchhhHHHHHHHHHHHHHhhhhcCCCCCc
Q 015669 200 DGPKPVVAFITGGAWIIG-YKAWGSLLGQQLSER--DIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDR 276 (403)
Q Consensus 200 ~~~~PvVV~iHGGg~~~g-~~~~~~~~~~~La~~--G~~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~r 276 (403)
.++.-.||..|| ..+ +...+..-......+ +..++.-.+++.-..+....-.=-....+|+++.+.... -++
T Consensus 77 ~k~~HLvVlthG---i~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~s--i~k 151 (405)
T KOG4372|consen 77 TKPKHLVVLTHG---LHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYS--IEK 151 (405)
T ss_pred cCCceEEEeccc---cccccHHHHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHHHhhhhhccc--cce
Confidence 455669999999 444 333333434444433 555555555543222221100000112333443322222 369
Q ss_pred EEEEEcCchHHHHHHH
Q 015669 277 IYLMGQSAGAHIAACT 292 (403)
Q Consensus 277 I~l~G~S~GG~la~~~ 292 (403)
|-.+|||.||.++..+
T Consensus 152 ISfvghSLGGLvar~A 167 (405)
T KOG4372|consen 152 ISFVGHSLGGLVARYA 167 (405)
T ss_pred eeeeeeecCCeeeeEE
Confidence 9999999999887543
No 230
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=67.03 E-value=44 Score=33.78 Aligned_cols=105 Identities=11% Similarity=0.092 Sum_probs=62.0
Q ss_pred EEEEEeeCCCCCCCcEEEEEcCCcccCCcc-----ccc-hHHHHHHHhC-CCeEE-EecccC------------------
Q 015669 190 RLDLYFPKSSDGPKPVVAFITGGAWIIGYK-----AWG-SLLGQQLSER-DIIVA-CIDYRN------------------ 243 (403)
Q Consensus 190 ~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~-----~~~-~~~~~~La~~-G~~Vv-~~dyR~------------------ 243 (403)
.+.+|+|++...+...+|+..|+-+--+.. .+. .....+.|++ .-.++ .-|-..
T Consensus 111 nV~iyiPd~v~~~~allvvnnG~~~kk~~~~~~~s~d~~~e~la~var~t~tpiisVsDvPNQ~lty~ddg~~lrEDesV 190 (507)
T COG4287 111 NVGIYIPDNVNYKDALLVVNNGTRRKKEGERYYDSFDLDVEELAWVARETETPIISVSDVPNQYLTYQDDGKPLREDESV 190 (507)
T ss_pred cceEEccCCcChhceEEEEecCcccCCCCccccCCccCCHHHHHHHHHhccCceEEeccCCCcceeeccCCccccchHHH
Confidence 588999988766667788888854322221 111 1222344444 33333 333221
Q ss_pred ---------CCC--CCch---hhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHH
Q 015669 244 ---------FPQ--GTIK---DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 244 ---------~~~--~~~~---~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
.|+ .++| .++.-+..|++-.++.++.+.+ +...|.|-|=-|..++..|..+
T Consensus 191 a~SwslFmeaPeqr~~lPL~VPMv~a~srAMdlAq~eL~q~~I--k~F~VTGaSKRgWttwLTAIaD 255 (507)
T COG4287 191 AHSWSLFMEAPEQRPFLPLLVPMVYAVSRAMDLAQDELEQVEI--KGFMVTGASKRGWTTWLTAIAD 255 (507)
T ss_pred HHHHHHHhcCcccccCcccccHHHHHHHHHHHHHHhhhhheee--eeEEEeccccchHHHHHHHhcC
Confidence 111 0111 1355566677777777776554 6899999999999999888765
No 231
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=63.32 E-value=29 Score=34.71 Aligned_cols=44 Identities=20% Similarity=0.257 Sum_probs=29.1
Q ss_pred CCCcEEEEEcCchHHHHHHHHHHHHHHhcCCCCCCcccccccceeeeeccCCC
Q 015669 273 DPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYN 325 (403)
Q Consensus 273 d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~ik~~v~isg~~d 325 (403)
..++|.|+|||+|+-+....+..-+.+.. ...+..++.+.++..
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~---------~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKA---------FGLVENVVLMGAPVP 261 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccc---------cCeEeeEEEecCCCC
Confidence 34679999999999999888766543321 123566666655443
No 232
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=60.15 E-value=21 Score=26.39 Aligned_cols=36 Identities=17% Similarity=0.120 Sum_probs=17.2
Q ss_pred eecCCCceEEEEEeeCC------CCCCCcEEEEEcCCcccCCccc
Q 015669 182 VYGDQPRNRLDLYFPKS------SDGPKPVVAFITGGAWIIGYKA 220 (403)
Q Consensus 182 ~y~~~~~~~l~vy~P~~------~~~~~PvVV~iHGGg~~~g~~~ 220 (403)
...++|+-.+.++.-.. ...++|+|++.|| ..++..
T Consensus 16 ~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HG---L~~ss~ 57 (63)
T PF04083_consen 16 EVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHG---LLQSSD 57 (63)
T ss_dssp EEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE-----TT--GG
T ss_pred EEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECC---cccChH
Confidence 33556776676665322 3456899999999 444443
No 233
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=58.63 E-value=1.1e+02 Score=29.77 Aligned_cols=81 Identities=20% Similarity=0.294 Sum_probs=46.6
Q ss_pred cCCcccCCccccchHHHHHHHhCCCeEEEecccCCCC--CCc---hhhHHHHHHHHHHHHHhhhhcCC-CCCcEEEEEcC
Q 015669 210 TGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQ--GTI---KDMVKDASQGISFVCNNISEYGG-DPDRIYLMGQS 283 (403)
Q Consensus 210 HGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~--~~~---~~~~~D~~~al~~l~~~~~~~g~-d~~rI~l~G~S 283 (403)
.|.||+--.. ..-.+++..-+...+++.|-.-|- .++ ....+-..+.++-|.++....-- +.-|++|.|+|
T Consensus 41 TGtGWVdp~a---~~a~E~l~~GD~A~va~QYSylPSw~sfl~dr~~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeS 117 (289)
T PF10081_consen 41 TGTGWVDPWA---VDALEYLYGGDVAIVAMQYSYLPSWLSFLVDRDAAREAARALFEAVYARWSTLPEDRRPKLYLYGES 117 (289)
T ss_pred CCCCccCHHH---HhHHHHHhCCCeEEEEeccccccchHHHhcccchHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccC
Confidence 5667753322 122345555588999999865431 121 12233344455556555554422 33489999999
Q ss_pred chHHHHHHHH
Q 015669 284 AGAHIAACTL 293 (403)
Q Consensus 284 ~GG~la~~~a 293 (403)
+|+.-+....
T Consensus 118 LGa~g~~~af 127 (289)
T PF10081_consen 118 LGAYGGEAAF 127 (289)
T ss_pred ccccchhhhh
Confidence 9998776443
No 234
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=51.97 E-value=26 Score=33.82 Aligned_cols=99 Identities=14% Similarity=0.175 Sum_probs=54.0
Q ss_pred eEEEEEeeCCCCCCCcEEEEEcCCcccCCcccc--chHHHHHHHhCCCeEEEecccCCCCCCchhh----HHHHHHHHHH
Q 015669 189 NRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAW--GSLLGQQLSERDIIVACIDYRNFPQGTIKDM----VKDASQGISF 262 (403)
Q Consensus 189 ~~l~vy~P~~~~~~~PvVV~iHGGg~~~g~~~~--~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~~----~~D~~~al~~ 262 (403)
..+..++|. +..|+-+++-|-| +... ...+...+.++|+..+.++-..+++...+.. ++-+.+.+.-
T Consensus 102 A~~~~liPQ---K~~~KOG~~a~tg----dh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~m 174 (371)
T KOG1551|consen 102 ARVAWLIPQ---KMADLCLSWALTG----DHVYTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKM 174 (371)
T ss_pred eeeeeeccc---CcCCeeEEEeecC----CceeEeeeeecCchhhhcchheeeecccccccCCHHHHHHHHHHHHHHHHh
Confidence 467788884 4557888877632 2221 1344556667777777777665555443321 1111111111
Q ss_pred HHHhhhh----cCC----CCCcEEEEEcCchHHHHHHHHH
Q 015669 263 VCNNISE----YGG----DPDRIYLMGQSAGAHIAACTLL 294 (403)
Q Consensus 263 l~~~~~~----~g~----d~~rI~l~G~S~GG~la~~~a~ 294 (403)
=...|++ |.. .-.+..|.|-||||.+|..+..
T Consensus 175 G~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS 214 (371)
T KOG1551|consen 175 GRATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGS 214 (371)
T ss_pred hHHHHHHHHHhcccccccCcccceeeeeecccHHHHhhcc
Confidence 1111111 111 1258999999999999987654
No 235
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=51.08 E-value=26 Score=33.76 Aligned_cols=37 Identities=35% Similarity=0.473 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHH
Q 015669 253 VKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTL 293 (403)
Q Consensus 253 ~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a 293 (403)
...+..+..++.++.. .+ ++|.|+|+|-||..|-.++
T Consensus 74 ~~~I~~ay~~l~~~~~--~g--d~I~lfGFSRGA~~AR~~a 110 (277)
T PF09994_consen 74 EARIRDAYRFLSKNYE--PG--DRIYLFGFSRGAYTARAFA 110 (277)
T ss_pred HHHHHHHHHHHHhccC--Cc--ceEEEEecCccHHHHHHHH
Confidence 4566667888766652 22 5899999999999998766
No 236
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=44.39 E-value=32 Score=33.55 Aligned_cols=22 Identities=36% Similarity=0.484 Sum_probs=19.0
Q ss_pred CcEEEEEcCchHHHHHHHHHHH
Q 015669 275 DRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 275 ~rI~l~G~S~GG~la~~~a~~~ 296 (403)
.+|.|.|||.||.+|..+....
T Consensus 276 a~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 276 ARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred ceEEEeccccchHHHHHhcccc
Confidence 5999999999999999876544
No 237
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=44.39 E-value=32 Score=33.55 Aligned_cols=22 Identities=36% Similarity=0.484 Sum_probs=19.0
Q ss_pred CcEEEEEcCchHHHHHHHHHHH
Q 015669 275 DRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 275 ~rI~l~G~S~GG~la~~~a~~~ 296 (403)
.+|.|.|||.||.+|..+....
T Consensus 276 a~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 276 ARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred ceEEEeccccchHHHHHhcccc
Confidence 5999999999999999876544
No 238
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=42.81 E-value=31 Score=29.61 Aligned_cols=38 Identities=18% Similarity=0.217 Sum_probs=23.9
Q ss_pred CCcEEEEEcCCcccCCcc---------c--c----------chHHHHHHHhCCCeEEEe
Q 015669 202 PKPVVAFITGGAWIIGYK---------A--W----------GSLLGQQLSERDIIVACI 239 (403)
Q Consensus 202 ~~PvVV~iHGGg~~~g~~---------~--~----------~~~~~~~La~~G~~Vv~~ 239 (403)
++..+||+||..|..-.. . | .......|.+.|+.|+.+
T Consensus 56 ~y~~viFvHGCFWh~H~c~~a~vPksnt~fWleKi~kNveRD~r~~~~L~~~GwrvlvV 114 (150)
T COG3727 56 KYRCVIFVHGCFWHGHHCYLAKVPKSNTEFWLEKIGKNVERDERDIKRLQQLGWRVLVV 114 (150)
T ss_pred CceEEEEEeeeeccCCccccccCCCcchHHHHHHHhhhhhhhHHHHHHHHHcCCeEEEE
Confidence 456999999988853211 0 1 112345677779988765
No 239
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=41.99 E-value=84 Score=33.77 Aligned_cols=64 Identities=17% Similarity=0.222 Sum_probs=37.3
Q ss_pred CCeEEEecccCCCCCC---chh--hHHHHHHHHHHHHHhhhhcC-CCCCcEEEEEcCchHHHHHHHHHHH
Q 015669 233 DIIVACIDYRNFPQGT---IKD--MVKDASQGISFVCNNISEYG-GDPDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 233 G~~Vv~~dyR~~~~~~---~~~--~~~D~~~al~~l~~~~~~~g-~d~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
+.+++.++|+.+.... ++. ...-...-.+-+.+.+.+.+ +|-+.|.-+||||||.++=.+++..
T Consensus 478 ~~Rii~l~Y~Tsit~w~~~~p~e~~r~sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda 547 (697)
T KOG2029|consen 478 KSRIIGLEYTTSITDWRARCPAEAHRRSLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDA 547 (697)
T ss_pred cceEEEeecccchhhhcccCcccchhhHHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHH
Confidence 6889999998743221 111 12222222222333333334 4457888999999999888777654
No 240
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=35.51 E-value=1.1e+02 Score=29.80 Aligned_cols=38 Identities=21% Similarity=0.362 Sum_probs=29.0
Q ss_pred eCCCCCCCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccC
Q 015669 196 PKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRN 243 (403)
Q Consensus 196 P~~~~~~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~ 243 (403)
|+..-...|.|+|.-|+|+ ..+.|+..||.|+..|+-.
T Consensus 245 ~~~~~~~vPmi~fakG~g~----------~Le~l~~tG~DVvgLDWTv 282 (359)
T KOG2872|consen 245 PELGLAPVPMILFAKGSGG----------ALEELAQTGYDVVGLDWTV 282 (359)
T ss_pred hhhcCCCCceEEEEcCcch----------HHHHHHhcCCcEEeecccc
Confidence 3434456799999999654 4577888899999999864
No 241
>PLN02872 triacylglycerol lipase
Probab=33.39 E-value=44 Score=34.05 Aligned_cols=25 Identities=16% Similarity=0.029 Sum_probs=21.2
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHHHh
Q 015669 375 PPIILFHGTADYSIPADARILQILFKE 401 (403)
Q Consensus 375 pPvLIiHG~~D~vVP~~~S~~l~lf~~ 401 (403)
.|++|++|++|.+++++..+. ++++
T Consensus 326 ~Pv~i~~G~~D~lv~~~dv~~--l~~~ 350 (395)
T PLN02872 326 LPLWMGYGGTDGLADVTDVEH--TLAE 350 (395)
T ss_pred ccEEEEEcCCCCCCCHHHHHH--HHHH
Confidence 599999999999999998876 4444
No 242
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=33.37 E-value=73 Score=29.73 Aligned_cols=15 Identities=47% Similarity=0.521 Sum_probs=12.9
Q ss_pred cEEEEEcCchHHHHH
Q 015669 276 RIYLMGQSAGAHIAA 290 (403)
Q Consensus 276 rI~l~G~S~GG~la~ 290 (403)
-+..+|+|+|+.++.
T Consensus 118 G~~YiG~SAGA~ia~ 132 (224)
T COG3340 118 GTPYIGWSAGANIAG 132 (224)
T ss_pred CCceEEeccCceeec
Confidence 467899999999886
No 243
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=32.53 E-value=29 Score=36.34 Aligned_cols=27 Identities=33% Similarity=0.518 Sum_probs=23.3
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHHHhc
Q 015669 374 LPPIILFHGTADYSIPADARILQILFKEL 402 (403)
Q Consensus 374 ~pPvLIiHG~~D~vVP~~~S~~l~lf~~l 402 (403)
-..+|+.||..|.+||+..++. .|+++
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~--YY~~V 379 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTID--YYERV 379 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHH--HHHHH
Confidence 3489999999999999999997 77654
No 244
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=28.31 E-value=1.8e+02 Score=27.38 Aligned_cols=17 Identities=41% Similarity=0.430 Sum_probs=13.7
Q ss_pred cEEEEEcCchHHHHHHH
Q 015669 276 RIYLMGQSAGAHIAACT 292 (403)
Q Consensus 276 rI~l~G~S~GG~la~~~ 292 (403)
-+.++|.|+|+.++...
T Consensus 113 G~~~~G~SAGAii~~~~ 129 (233)
T PRK05282 113 GTPYIGWSAGANVAGPT 129 (233)
T ss_pred CCEEEEECHHHHhhhcc
Confidence 47899999999886543
No 245
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=27.83 E-value=72 Score=29.85 Aligned_cols=33 Identities=30% Similarity=0.359 Sum_probs=24.7
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHH
Q 015669 259 GISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLE 295 (403)
Q Consensus 259 al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~ 295 (403)
+++++.++ ++.++.-.+.|-|+|+.++..++..
T Consensus 17 Vl~~L~e~----gi~~~~~~i~G~SAGAl~aa~~asg 49 (233)
T cd07224 17 VLSLLIEA----GVINETTPLAGASAGSLAAACSASG 49 (233)
T ss_pred HHHHHHHc----CCCCCCCEEEEEcHHHHHHHHHHcC
Confidence 45555554 5666667899999999999988754
No 246
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=26.60 E-value=1.2e+02 Score=30.29 Aligned_cols=88 Identities=22% Similarity=0.165 Sum_probs=46.7
Q ss_pred CCcEEEEEcCCcccCCccccchHHHHHHHhC--CCeEEEecccC------CCCCC-----------chhhHHHHHHHHHH
Q 015669 202 PKPVVAFITGGAWIIGYKAWGSLLGQQLSER--DIIVACIDYRN------FPQGT-----------IKDMVKDASQGISF 262 (403)
Q Consensus 202 ~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~--G~~Vv~~dyR~------~~~~~-----------~~~~~~D~~~al~~ 262 (403)
..++=+|+||-| +...-...++++.++ +..|+.+|--. ...+. +-....|.....+|
T Consensus 210 ~g~vDi~V~gaG----TGGTitgvGRylke~~~~~kVv~vdp~~S~~~~~~~~g~~~~~I~GIGyg~~p~~ld~~~vd~~ 285 (362)
T KOG1252|consen 210 DGKVDIFVAGAG----TGGTITGVGRYLKEQNPNIKVVGVDPQESIVLSGGKPGPTFHKIQGIGYGFIPTTLDTKLVDEV 285 (362)
T ss_pred cCCCCEEEeccC----CCceeechhHHHHHhCCCCEEEEeCCCcceeccCCCCCCCccceeccccCcCccccchHHHHHH
Confidence 345667888833 334445578888876 78888877332 11111 11123344444444
Q ss_pred HHHhhhh-----cCCCCCcEEEEEcCchHHHHHHHH
Q 015669 263 VCNNISE-----YGGDPDRIYLMGQSAGAHIAACTL 293 (403)
Q Consensus 263 l~~~~~~-----~g~d~~rI~l~G~S~GG~la~~~a 293 (403)
++..-+. ..+-.+.=.++|-|.|+..+..+=
T Consensus 286 ~~~~~d~A~~~Ar~La~eeGll~G~SSGan~~aAl~ 321 (362)
T KOG1252|consen 286 LKVSSDEAIEMARRLALEEGLLVGISSGANVAAALK 321 (362)
T ss_pred HHhCCHHHHHHHHHHHHhhCeeecccchHHHHHHHH
Confidence 4332110 001113447889999998877443
No 247
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=26.02 E-value=58 Score=30.29 Aligned_cols=19 Identities=37% Similarity=0.454 Sum_probs=16.8
Q ss_pred CcEEEEEcCchHHHHHHHH
Q 015669 275 DRIYLMGQSAGAHIAACTL 293 (403)
Q Consensus 275 ~rI~l~G~S~GG~la~~~a 293 (403)
++|.|+++|||-.+|..++
T Consensus 57 ~~i~lvAWSmGVw~A~~~l 75 (213)
T PF04301_consen 57 REIYLVAWSMGVWAANRVL 75 (213)
T ss_pred ceEEEEEEeHHHHHHHHHh
Confidence 6999999999999987664
No 248
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=25.90 E-value=2.3e+02 Score=25.36 Aligned_cols=67 Identities=15% Similarity=-0.012 Sum_probs=41.3
Q ss_pred CCcEEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccCCCCCCc--hhhHHHHHHHHHHHHHhhh
Q 015669 202 PKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTI--KDMVKDASQGISFVCNNIS 268 (403)
Q Consensus 202 ~~PvVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~~~~~~~--~~~~~D~~~al~~l~~~~~ 268 (403)
..+.++++||..=..........+.+.|.+.|..+...-|...+.+.. .....-....++|+.+++.
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcC
Confidence 457889999942211222334556778888888877777776655443 2234445667888887753
No 249
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=25.79 E-value=3.9e+02 Score=26.25 Aligned_cols=92 Identities=24% Similarity=0.318 Sum_probs=53.2
Q ss_pred CCCCcEEEEEcCCcccCCccc--cchHHHHHHHhCCCe--EEEec--------------------------ccCCCCCCc
Q 015669 200 DGPKPVVAFITGGAWIIGYKA--WGSLLGQQLSERDII--VACID--------------------------YRNFPQGTI 249 (403)
Q Consensus 200 ~~~~PvVV~iHGGg~~~g~~~--~~~~~~~~La~~G~~--Vv~~d--------------------------yR~~~~~~~ 249 (403)
..+.|+++.+-| +.|+.. ....+..++.+++-. |+-.| |-++|.|.+
T Consensus 15 ~~~~p~~ilVvG---MAGSGKTTF~QrL~~hl~~~~~ppYviNLDPAv~~vpy~aniDIRDtVkYkEvMkqY~LGPNGgI 91 (366)
T KOG1532|consen 15 AIQRPVIILVVG---MAGSGKTTFMQRLNSHLHAKKTPPYVINLDPAVRNVPYPANIDIRDTVKYKEVMKQYQLGPNGGI 91 (366)
T ss_pred cccCCcEEEEEe---cCCCCchhHHHHHHHHHhhccCCCeEEeCCHHHhcCCCccCCchhhhhhHHHHHHHhCCCCCcch
Confidence 446788999989 556554 234455556555332 22222 223454444
Q ss_pred hhh----HHHHHHHHHHHHHhhhhcC---C-CCCcEEEEEcCchHHHHHHHHH
Q 015669 250 KDM----VKDASQGISFVCNNISEYG---G-DPDRIYLMGQSAGAHIAACTLL 294 (403)
Q Consensus 250 ~~~----~~D~~~al~~l~~~~~~~g---~-d~~rI~l~G~S~GG~la~~~a~ 294 (403)
-.. .......++++.+..+.+. + .|.+|-++-||+-|.+....+.
T Consensus 92 ~TsLNLF~tk~dqv~~~iek~~~~~~~~liDTPGQIE~FtWSAsGsIIte~la 144 (366)
T KOG1532|consen 92 VTSLNLFATKFDQVIELIEKRAEEFDYVLIDTPGQIEAFTWSASGSIITETLA 144 (366)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhcccCEEEEcCCCceEEEEecCCccchHhhHh
Confidence 322 2333445666666555543 3 3889999999999998765543
No 250
>cd02011 TPP_PK Thiamine pyrophosphate (TPP) family, Phosphoketolase (PK) subfamily, TPP-binding module; PK catalyzes the conversion of D-xylulose 5-phosphate and phosphate to acetyl phosphate, D-glyceraldehyde-3-phosphate and H2O. This enzyme requires divalent magnesium ions and TPP for activity.
Probab=24.71 E-value=3.1e+02 Score=25.75 Aligned_cols=59 Identities=8% Similarity=0.088 Sum_probs=39.5
Q ss_pred EEEEEcCCcccCCcccc-----chHHHHHHHhCCCeEEEecccCCCCCCchhhHHHHHHHHHHHHHhhh
Q 015669 205 VVAFITGGAWIIGYKAW-----GSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNIS 268 (403)
Q Consensus 205 vVV~iHGGg~~~g~~~~-----~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~~ 268 (403)
++..+|-.+|....... ...+.+.+...|+.++.+| +.........+.++++++.+.|.
T Consensus 115 vLpIld~Ng~~i~~pt~~~~~~~e~l~~~~~~yG~~~~~VD-----G~D~~av~~~~a~a~~~~~~~i~ 178 (227)
T cd02011 115 VLPILHLNGYKISNPTILARISHEELEALFRGYGYEPYFVE-----GDDPETMHQAMAATLDWAIEEIK 178 (227)
T ss_pred eEEEEEcCCCcccCCccccccCchhHHHHHHhCCCceEEEC-----CCCHHHHHHHHHHHHHHHHHHHH
Confidence 55555666666555433 2456677777799999987 34555667777778888877765
No 251
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=24.46 E-value=1.3e+02 Score=27.50 Aligned_cols=37 Identities=27% Similarity=0.363 Sum_probs=26.9
Q ss_pred CCCcEEEEEcCCcccCCcccc--chHHHHHHHhCCCeEEEec
Q 015669 201 GPKPVVAFITGGAWIIGYKAW--GSLLGQQLSERDIIVACID 240 (403)
Q Consensus 201 ~~~PvVV~iHGGg~~~g~~~~--~~~~~~~La~~G~~Vv~~d 240 (403)
+..|.+|||.| .+|+... -..+.+.|.++|+.+...|
T Consensus 20 ~~~~~viW~TG---LSGsGKSTiA~ale~~L~~~G~~~y~LD 58 (197)
T COG0529 20 GQKGAVIWFTG---LSGSGKSTIANALEEKLFAKGYHVYLLD 58 (197)
T ss_pred CCCCeEEEeec---CCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 45689999999 5555432 2335567778899999998
No 252
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=24.06 E-value=1.8e+02 Score=26.03 Aligned_cols=60 Identities=20% Similarity=0.422 Sum_probs=39.2
Q ss_pred hHHHHHHHhC-CCeEEEecccCCCCCCchhhHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHH
Q 015669 223 SLLGQQLSER-DIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTL 293 (403)
Q Consensus 223 ~~~~~~La~~-G~~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a 293 (403)
..+.+.+++. |+++++|.|.+ .++..+.. +++|+... .|+. +.+.+++.|.|+.-...+.
T Consensus 59 ~~~~~~i~~aD~li~~tPeYn~----s~pg~lKn---aiD~l~~~--~~~~--Kpv~~~~~s~g~~~~~~a~ 119 (184)
T COG0431 59 QALREAIAAADGLIIATPEYNG----SYPGALKN---AIDWLSRE--ALGG--KPVLLLGTSGGGAGGLRAQ 119 (184)
T ss_pred HHHHHHHHhCCEEEEECCccCC----CCCHHHHH---HHHhCCHh--HhCC--CcEEEEecCCCchhHHHHH
Confidence 4455556665 99999999974 44444443 67777654 3333 5788888888877666443
No 253
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=24.05 E-value=1.8e+02 Score=22.52 Aligned_cols=41 Identities=17% Similarity=0.338 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHH
Q 015669 253 VKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLE 295 (403)
Q Consensus 253 ~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~ 295 (403)
...+..-++|+++...- -.|+++.|+|-|.|=.+|...++.
T Consensus 20 ~~~V~~qI~yvk~~~~~--~GpK~VLViGaStGyGLAsRIa~a 60 (78)
T PF12242_consen 20 ARNVENQIEYVKSQGKI--NGPKKVLVIGASTGYGLASRIAAA 60 (78)
T ss_dssp HHHHHHHHHHHHHC-----TS-SEEEEES-SSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCC--CCCceEEEEecCCcccHHHHHHHH
Confidence 45666678888875432 237899999999999999877764
No 254
>KOG4127 consensus Renal dipeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=22.69 E-value=2.5e+02 Score=28.44 Aligned_cols=78 Identities=23% Similarity=0.209 Sum_probs=50.3
Q ss_pred CcEEEEEcCCcccCCccc--cchHHHHHHHhCCCeEEEecccCCCCCCchhhHHHHHHHHHHHHHhhhhcCCCCCcEEEE
Q 015669 203 KPVVAFITGGAWIIGYKA--WGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLM 280 (403)
Q Consensus 203 ~PvVV~iHGGg~~~g~~~--~~~~~~~~La~~G~~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~ 280 (403)
+..|||-|..++...+.. -.....+.+++.|=+|..-=|+.+....-..-+.|+.+.++++++.+ |+ +.|++.
T Consensus 266 ~APVIFSHSsA~~vcns~rNVPDdVL~llk~NgGvVMVnfy~~~isc~~~A~v~~v~~Hi~hIr~Va---G~--~hIGlG 340 (419)
T KOG4127|consen 266 RAPVIFSHSSAYSVCNSSRNVPDDVLQLLKENGGVVMVNFYPGFISCSDRATVSDVADHINHIRAVA---GI--DHIGLG 340 (419)
T ss_pred cCceEeecccHHHHhcCccCCcHHHHHHHhhcCCEEEEEeecccccCCCcccHHHHHHHHHHHHHhh---cc--ceeecc
Confidence 346789999877655443 34556677777744333333555444444455899999999998865 44 578887
Q ss_pred EcCch
Q 015669 281 GQSAG 285 (403)
Q Consensus 281 G~S~G 285 (403)
|.=-|
T Consensus 341 g~yDG 345 (419)
T KOG4127|consen 341 GDYDG 345 (419)
T ss_pred CCcCC
Confidence 76444
No 255
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=21.17 E-value=2.6e+02 Score=26.02 Aligned_cols=34 Identities=35% Similarity=0.429 Sum_probs=24.4
Q ss_pred EEEEEcCCcccCCccccchHHHHHHHhCCCeEEEecccC
Q 015669 205 VVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRN 243 (403)
Q Consensus 205 vVV~iHGGg~~~g~~~~~~~~~~~La~~G~~Vv~~dyR~ 243 (403)
-+..+.||+-..| ...+..|+++|+.|+..|.+.
T Consensus 15 k~~~vtGg~sGIG-----rAia~~la~~Garv~v~dl~~ 48 (256)
T KOG1200|consen 15 KVAAVTGGSSGIG-----RAIAQLLAKKGARVAVADLDS 48 (256)
T ss_pred ceeEEecCCchHH-----HHHHHHHHhcCcEEEEeecch
Confidence 3455666543333 567788999999999999875
No 256
>cd00221 Vsr Very Short Patch Repair (Vsr) Endonuclease. Endonucleases in DNA repair that recognize damaged DNA and cleave the phosphodiester backbone. Vsr endonucleases have a common endonuclease topology that has been tailored for recognition of TG mismatches.
Probab=20.92 E-value=1.4e+02 Score=24.91 Aligned_cols=45 Identities=16% Similarity=0.206 Sum_probs=29.2
Q ss_pred EEEEEeeCCCCCCCcEEEEEcCCcccCCc-------------------c--ccchHHHHHHHhCCCeEEEe
Q 015669 190 RLDLYFPKSSDGPKPVVAFITGGAWIIGY-------------------K--AWGSLLGQQLSERDIIVACI 239 (403)
Q Consensus 190 ~l~vy~P~~~~~~~PvVV~iHGGg~~~g~-------------------~--~~~~~~~~~La~~G~~Vv~~ 239 (403)
.+++..|. ..++|++.|..|.... . .....-...|.+.|+.|+.+
T Consensus 45 ~~D~~~~~-----~klaIe~DG~~wH~~~~~~~~~~~~~~~~w~~k~~~~~~rD~~r~~~L~~~GW~ViRv 110 (115)
T cd00221 45 KPDIVVPG-----YRLAIFVDGCFWHGHPCHKRKPPPKNTEFWLEKIERNVERDRRVQAALERLGWRVLRV 110 (115)
T ss_pred ccCEEecC-----CCEEEEEcCccccCCccccccCCCccHHHHHHHHHHHHHHHHHHHHHHHHCcCEEEEE
Confidence 46777763 5699999998776543 1 11122345677779999875
No 257
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=20.27 E-value=1.7e+02 Score=28.64 Aligned_cols=21 Identities=19% Similarity=0.305 Sum_probs=19.0
Q ss_pred CcEEEEEeCCCCCCCHHHHHH
Q 015669 375 PPIILFHGTADYSIPADARIL 395 (403)
Q Consensus 375 pPvLIiHG~~D~vVP~~~S~~ 395 (403)
-++||..|+.|-+||+-..+.
T Consensus 234 i~VliY~Gd~D~icn~~g~~~ 254 (319)
T PLN02213 234 YRSLIYSGDHDIAVPFLATQA 254 (319)
T ss_pred ceEEEEECCcCeeCCcHhHHH
Confidence 499999999999999988876
No 258
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=20.14 E-value=2.2e+02 Score=26.61 Aligned_cols=55 Identities=16% Similarity=0.123 Sum_probs=33.5
Q ss_pred HHHHHHHhC-CCeEEEecccCCCCCCchhhHHHHHHHHHHHHHhhhh-cCCCCCcEEEEEcCch
Q 015669 224 LLGQQLSER-DIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISE-YGGDPDRIYLMGQSAG 285 (403)
Q Consensus 224 ~~~~~La~~-G~~Vv~~dyR~~~~~~~~~~~~D~~~al~~l~~~~~~-~g~d~~rI~l~G~S~G 285 (403)
.+.+.+.+. |++++++.|-+ .++..+.+ +++|+...... -...-+.+.++|.|.|
T Consensus 83 ~l~~~v~~ADgvii~TPEYn~----sipg~LKN---aiDwls~~~~~~~~~~~KpvaivgaSgg 139 (219)
T TIGR02690 83 ELRQLSEWSEGQVWCSPERHG----AITGSQKD---QIDWIPLSVGPVRPTQGKTLAVMQVSGG 139 (219)
T ss_pred HHHHHHHhCCEEEEeCCcccc----CcCHHHHH---HHHhcccCcccccccCCCcEEEEEeCCc
Confidence 345555555 89999999963 45555554 67787653110 0123367899998844
No 259
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=20.04 E-value=3.8e+02 Score=28.51 Aligned_cols=23 Identities=35% Similarity=0.375 Sum_probs=19.1
Q ss_pred CCcEEEEEcCchHHHHHHHHHHH
Q 015669 274 PDRIYLMGQSAGAHIAACTLLEQ 296 (403)
Q Consensus 274 ~~rI~l~G~S~GG~la~~~a~~~ 296 (403)
.+.|+++|+|.|+-+....+.+-
T Consensus 446 ~RPVTLVGFSLGARvIf~CL~~L 468 (633)
T KOG2385|consen 446 NRPVTLVGFSLGARVIFECLLEL 468 (633)
T ss_pred CCceeEeeeccchHHHHHHHHHH
Confidence 47899999999999998666543
Done!