BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015670
(403 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6NPN3|C3H58_ARATH Zinc finger CCCH domain-containing protein 58 OS=Arabidopsis
thaliana GN=At5g18550 PE=2 SV=1
Length = 465
Score = 398 bits (1023), Expect = e-110, Method: Compositional matrix adjust.
Identities = 237/409 (57%), Positives = 285/409 (69%), Gaps = 35/409 (8%)
Query: 1 MGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAG--SVSNVSLNYYGYP 58
+G R GEFPER+GQPVCQ++MRTGTCK+GASCKYHHPRQG G SV+ VSLNY G+P
Sbjct: 84 LGGLRTEAGEFPERMGQPVCQHFMRTGTCKFGASCKYHHPRQGGGGDSVTPVSLNYMGFP 143
Query: 59 LRPGEKECSYYMKTRQCKFGATCKFHHPQPAGVPAPTPSPAPQVAAVPTPVPAPALYPPL 118
LRPGEKECSY+M+T QCKFG+TC++HHP P GV AP+ Q++A PT +YP L
Sbjct: 144 LRPGEKECSYFMRTGQCKFGSTCRYHHPVPPGVQAPSQQQQQQLSAGPT------MYPSL 197
Query: 119 QSPSVPSAQQYGVVVARPPLLHGSYVQGP--YGPVLVSPSMFSLQGWSPYATSLNPISSP 176
QS +VPS+QQYGVV+ARP LL GSYVQ P YG +++ P M GW+PY S++ + SP
Sbjct: 198 QSQTVPSSQQYGVVLARPQLLPGSYVQSPYGYGQMVLPPGMVPYSGWNPYQASVSAMPSP 257
Query: 177 GTGTQSSVGSSSIYGITQLSASAPAYTGTYQSLPSSVGPSSSSQKEHPFPERPGQQECQY 236
GTQ S+G+SS+YGIT LS SAPA YQS PSS G S KE FP+RP Q ECQY
Sbjct: 258 --GTQPSMGTSSVYGITPLSPSAPA----YQSGPSSTG---VSNKEQTFPQRPEQPECQY 308
Query: 237 YMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACK 296
+M+TGDCKFG+SCRFHHP E P+ TLS GLPLRPGA PCTH+ Q G+CKFGPACK
Sbjct: 309 FMRTGDCKFGTSCRFHHPMEAASPEAS-TLSHIGLPLRPGAVPCTHFAQHGICKFGPACK 367
Query: 297 FDH--PMGMLSYSPSASSLADMPVAPYPVGSSIGTLAPSSASSDLRPELISGSSKDSVST 354
FDH LSYSPS SSL DMPVAPYP SS+GTLAPSS SSD ELIS SS + ++T
Sbjct: 368 FDHSLGSSSLSYSPSPSSLTDMPVAPYP--SSLGTLAPSS-SSDQCTELISSSSIEPITT 424
Query: 355 RMSSSVSISSGSVGSILSKSGPVPHSSMQQSGQSSGPSTADDSSAEART 403
S ++++G S P P + + D +S EA+T
Sbjct: 425 TTGGSETVAAGVSSMTSDVSHPEPAET----------NKGDSASNEAKT 463
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 225 FPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYV 284
FPERP + +C YY++TG C +GS CRF+HPR + P R G C H++
Sbjct: 48 FPERPDEPDCIYYLRTGVCGYGSRCRFNHPRNRAPVLGGLRTEAGEFPERMGQPVCQHFM 107
Query: 285 QRGVCKFGPACKFDHPM---GMLSYSPSASSLADMPVAP 320
+ G CKFG +CK+ HP G S +P + + P+ P
Sbjct: 108 RTGTCKFGASCKYHHPRQGGGGDSVTPVSLNYMGFPLRP 146
>sp|Q5NAW2|C3H6_ORYSJ Zinc finger CCCH domain-containing protein 6 OS=Oryza sativa subsp.
japonica GN=Os01g0258700 PE=2 SV=2
Length = 476
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/389 (53%), Positives = 262/389 (67%), Gaps = 29/389 (7%)
Query: 2 GAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRP 61
GA A ++PER GQP+C+YYM+TGTCK+G +CKYHHP+Q G+V V LN G+P+R
Sbjct: 96 GARNAAALDYPERAGQPICEYYMKTGTCKFGTNCKYHHPKQ-DGAVLPVMLNNSGFPIRL 154
Query: 62 GEKECSYYMKTRQCKFGATCKFHHPQPAGVPAPTPSPAPQVAAVPTPVPAPALYPPLQSP 121
GEKECSYYMKT QCKFG TCKFHHP+ GVP P +YPPLQSP
Sbjct: 155 GEKECSYYMKTGQCKFGTTCKFHHPEFGGVPM-----------------TPGIYPPLQSP 197
Query: 122 SVPSAQQYGVV----VARPPLLHGSYVQGPYGPVLVSPSMFSLQGWSPYATSLNPISSPG 177
S+ S Y + + RPP++ GSY+ G Y P+++S M LQGWSPY S+NP+ S
Sbjct: 198 SIASPHPYASLANWQMGRPPVVPGSYIPGSYTPMMLSSGMIPLQGWSPYPASVNPVVS-- 255
Query: 178 TGTQSSVGSSSIYGITQL-SASAPAYTGTYQSLPSSVGPSSSSQKEHPFPERPGQQECQY 236
G Q +V + +YG+ S+S AY G Y SS G SS++Q+EH FPERPGQ +CQY
Sbjct: 256 GGAQQNVQAGPVYGMGHHGSSSTIAYGGPYVPYASSTGQSSNNQQEHGFPERPGQPDCQY 315
Query: 237 YMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACK 296
YM+TGDCKFG++C++HHPREL PK ++ LPLRPGA PC +Y Q G C++G ACK
Sbjct: 316 YMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYAQNGYCRYGVACK 375
Query: 297 FDHPMGMLSYSPSASSLADMPVAPYPVGSSIGTLAPSSASSDLRPELISGSSKDSVSTRM 356
+DHPMG L YSPSA L+DMP+APYP+G SI TLAPSS S DLRPE I S+KD ++
Sbjct: 376 YDHPMGTLGYSPSALPLSDMPIAPYPIGFSIATLAPSSPSPDLRPEYI--STKDQSVNQV 433
Query: 357 SSSVSISSGSVGSILSKSGPVPHSSMQQS 385
+S V+ S VGSIL K G P +M ++
Sbjct: 434 TSPVAASE-PVGSILPK-GVFPADTMMRA 460
Score = 75.1 bits (183), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 225 FPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMD---VTLSPFGLPLRPGAAPCT 281
PERPG+++C YY++TG C FG CR++HPR+ + + P R G C
Sbjct: 56 LPERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGGTEFGGGARNAAALDYPERAGQPICE 115
Query: 282 HYVQRGVCKFGPACKFDHP 300
+Y++ G CKFG CK+ HP
Sbjct: 116 YYMKTGTCKFGTNCKYHHP 134
>sp|Q84W91|C3H32_ARATH Zinc finger CCCH domain-containing protein 32 OS=Arabidopsis
thaliana GN=At2g47850 PE=2 SV=2
Length = 468
Score = 385 bits (988), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/372 (55%), Positives = 262/372 (70%), Gaps = 27/372 (7%)
Query: 9 GEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSY 68
G++PER G+P CQ+Y++TGTCK+GASCK+HHP+ GS+S+V LN YGYP+R G+ ECSY
Sbjct: 85 GQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVREGDNECSY 144
Query: 69 YMKTRQCKFGATCKFHHPQPAGVPAPTPSPAPQVAAVPTPVPAPALYPPLQSPSVPSAQQ 128
Y+KT QCKFG TCKFHHPQPAG P P P AP YP +QS +P Q
Sbjct: 145 YLKTGQCKFGITCKFHHPQPAGTTVPPP-----------PASAPQFYPSVQS-LMP--DQ 190
Query: 129 YG-----VVVARPPLLHGSYVQGPYGPVLVSPSMFSLQGWSPYATSLNPISSPGTGTQSS 183
YG + VAR LL GSY+QG YGP+L++P + + GWSPY+ ++P SPG Q +
Sbjct: 191 YGGPSSSLRVART-LLPGSYMQGAYGPMLLTPGVVPIPGWSPYSAPVSPALSPGA--QHA 247
Query: 184 VGSSSIYGITQLSASAPAYTGTYQSLPSSVGPSSSSQKEHPFPERPGQQECQYYMKTGDC 243
VG++S+YG+TQL+++ P+ G Y SL S P+ QKE FPERPG+ ECQYY+KTGDC
Sbjct: 248 VGATSLYGVTQLTSTTPSLPGVYPSLSS---PTGVIQKEQAFPERPGEPECQYYLKTGDC 304
Query: 244 KFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFDHPMGM 303
KFG+SC+FHHPR+ + P+ + LSP GLPLRPG CT YVQ G CKFG CKFDHPMG
Sbjct: 305 KFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHPMGT 364
Query: 304 LSYSPSASSLADMPVAPYPVGSSIGTLAPSSASSDLRPELISGSSKDSVSTRMSSSVSIS 363
+ Y+PSASSLAD PVAPYPV S +G LA + +SS ELI+G +KD+ T + +S S S
Sbjct: 365 IRYNPSASSLADAPVAPYPVSSLLGALAAAPSSSST--ELIAGGAKDAYMTGVPTSRSTS 422
Query: 364 SGSVGSILSKSG 375
+ S G I S+SG
Sbjct: 423 NISAGLIFSQSG 434
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Query: 225 FPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFG-LPLRPGAAPCTHY 283
+PERPG +C YYM+TG C +G+ CR++HPR+ ++ T+ G P R G PC Y
Sbjct: 42 YPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRA--SVEATVRATGQYPERFGEPPCQFY 99
Query: 284 VQRGVCKFGPACKFDHP 300
++ G CKFG +CKF HP
Sbjct: 100 LKTGTCKFGASCKFHHP 116
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 46 SVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGATCKFHHPQ 87
S+ + L YP RPG +C+YYM+T C +G C+++HP+
Sbjct: 31 SMWRLGLGSDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPR 72
Score = 39.7 bits (91), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 272 PLRPGAAPCTHYVQRGVCKFGPACKFDHPMGMLSYSPSASSLADMP 317
P RPGA C +Y++ GVC +G C+++HP S + + P
Sbjct: 43 PERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEATVRATGQYP 88
>sp|Q9SQU4|C3H34_ARATH Zinc finger CCCH domain-containing protein 34 OS=Arabidopsis
thaliana GN=At3g06410 PE=2 SV=2
Length = 462
Score = 347 bits (890), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 201/327 (61%), Positives = 239/327 (73%), Gaps = 14/327 (4%)
Query: 1 MGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAG--SVSNVSLNYYGYP 58
+G R G PER+G PVCQ++MRTGTCK+GASCKYHHPRQG G SV+ VSL+Y GYP
Sbjct: 87 IGGVRGEAGALPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGYP 146
Query: 59 LRPGEKECSYYMKTRQCKFGATCKFHHPQPAGVPAPTPSPAPQVAAVPTPVPAPALYPPL 118
LRPGEKECSYY++T QCKFG TC+F+HP P V P P Q +YP L
Sbjct: 147 LRPGEKECSYYLRTGQCKFGLTCRFNHPVPLAVQGPPQQPQQQQPQPQPQ--LQTIYPTL 204
Query: 119 QSPSVPSAQQYGVVVARPPLLHGSYVQGPYGP-VLVSPSMFSLQGWSPYATSLNPISSPG 177
QS S+PS+QQYG+V+ RP L GSY+Q PYGP +++ P M GW+PY SL+ + SPG
Sbjct: 205 QSQSIPSSQQYGLVLTRPSFLTGSYLQSPYGPPMVLPPGMVPYSGWNPYQASLSAMPSPG 264
Query: 178 TGTQSSVGSSSIYGITQLSASAPAYTGTYQSLPSSVGPSSSSQKEHPFPERPGQQECQYY 237
T Q S+GSSSIYG+T LS SA AYTGTYQS+PSS +S+ KE FP+RP Q ECQY+
Sbjct: 265 T--QPSIGSSSIYGLTPLSPSATAYTGTYQSVPSS----NSTSKE--FPQRPDQPECQYF 316
Query: 238 MKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACKF 297
M+TGDCKFGSSCR+HHP + + PK + LS GLPLRPG A CTH+ Q G+CKFGPACKF
Sbjct: 317 MRTGDCKFGSSCRYHHPVDAVPPKTGIVLSSIGLPLRPGVAQCTHFAQHGICKFGPACKF 376
Query: 298 DH-PMGMLSYSPSASSLADMPVAPYPV 323
DH LSYSPSASSL DMPVAPYP+
Sbjct: 377 DHSMSSSLSYSPSASSLTDMPVAPYPI 403
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%)
Query: 11 FPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYM 70
+PER +P C YY+RTG C YG+ C+++HPR + V P R G C ++M
Sbjct: 51 YPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALPERMGHPVCQHFM 110
Query: 71 KTRQCKFGATCKFHHPQPAG 90
+T CKFGA+CK+HHP+ G
Sbjct: 111 RTGTCKFGASCKYHHPRQGG 130
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 225 FPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYV 284
+PERP + +C YY++TG C +GS CRF+HPR+ V LP R G C H++
Sbjct: 51 YPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALPERMGHPVCQHFM 110
Query: 285 QRGVCKFGPACKFDHPM---GMLSYSPSASSLADMPVAP 320
+ G CKFG +CK+ HP G S +P + S P+ P
Sbjct: 111 RTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGYPLRP 149
>sp|Q5NAV3|C3H5_ORYSJ Zinc finger CCCH domain-containing protein 5 OS=Oryza sativa subsp.
japonica GN=Os01g0257400 PE=2 SV=1
Length = 466
Score = 337 bits (863), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 186/385 (48%), Positives = 246/385 (63%), Gaps = 35/385 (9%)
Query: 3 AARAGGG------EFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYG 56
A GGG E+PER GQPVC+YYM+ GTCK+G++CKY HPR+G SV V LN G
Sbjct: 84 AVLNGGGKTTHSAEYPERPGQPVCEYYMKNGTCKFGSNCKYDHPREG--SVQAVMLNSSG 141
Query: 57 YPLRPGEKECSYYMKTRQCKFGATCKFHHPQPAGVPAPTPSPAPQVAAVPTPVPAPALYP 116
YPLR GEK+C+YY+KT CKFG+TCKFHHP+ GV P +YP
Sbjct: 142 YPLRSGEKDCTYYVKTGHCKFGSTCKFHHPEIGGVSE-----------------TPNMYP 184
Query: 117 PLQSPSVPSAQQY----GVVVARPPLLHGSYVQGPYGPVLVSPSMFSLQGWSPYATSLNP 172
P+Q + S+ Y G + RPP+L GS++ G Y P+++ ++ +QGW+PY + +N
Sbjct: 185 PVQPQPISSSHPYQHLAGWQMGRPPVLPGSFLSGSYPPMMLPSTVVPMQGWNPYISPVNQ 244
Query: 173 ISSPGTGTQSSVGSSSIYGIT-QLSASAPAYTGTYQSLPSSVGPSSSSQKEHPFPERPGQ 231
++S G +V + YG++ Q ++A Y Y L SS PSSSS++E FP RPGQ
Sbjct: 245 VAS--AGGHQTVQAGPFYGLSHQGPSAAVTYGSQYAPLSSSTMPSSSSKQEPAFPARPGQ 302
Query: 232 QECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKF 291
ECQYY+KTG CKFGS+C++HHP+ L PK + LSP GLPLRPG+ PC +Y Q G CKF
Sbjct: 303 PECQYYLKTGSCKFGSACKYHHPQYLNTPKSNCMLSPLGLPLRPGSQPCAYYTQHGFCKF 362
Query: 292 GPACKFDHPMGMLSYSPSASSLADMPVAPYPVGSSIGTLAPSSASSDLRPELISGSSKDS 351
GP CKFDHPMG LSYSPSASS+ D+P+APYP+ ++ +AP S+SSDLRPE +
Sbjct: 363 GPTCKFDHPMGTLSYSPSASSITDLPIAPYPLNYAVAPVAPPSSSSDLRPEYL---LTKE 419
Query: 352 VSTRMSSSVSISSGSVGSILSKSGP 376
S S+S + G G++L P
Sbjct: 420 FSANQSASPGTTCGPAGAMLKAYAP 444
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
Query: 225 FPERPGQQECQYYMKTGDCKFGSSCRFHHPRE----LIVPKMDVTLSPFGLPLRPGAAPC 280
PERPG+ +C YY++TG C +G +CR++HPR+ ++ T P RPG C
Sbjct: 48 LPERPGEADCVYYLRTGACGYGENCRYNHPRDRAAAAVLNGGGKTTHSAEYPERPGQPVC 107
Query: 281 THYVQRGVCKFGPACKFDHP 300
+Y++ G CKFG CK+DHP
Sbjct: 108 EYYMKNGTCKFGSNCKYDHP 127
>sp|Q2R4J4|C3H63_ORYSJ Zinc finger CCCH domain-containing protein 63 OS=Oryza sativa
subsp. japonica GN=Os11g0472000 PE=2 SV=2
Length = 444
Score = 284 bits (727), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 164/378 (43%), Positives = 215/378 (56%), Gaps = 39/378 (10%)
Query: 3 AARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPG 62
AA GE+P+R+GQP CQYY++TGTCK+GA+CK+HHPR+ A + V LN GYPLRP
Sbjct: 90 AAARMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAIATRVQLNALGYPLRPN 149
Query: 63 EKECSYYMKTRQCKFGATCKFHHPQPAGVPAPTPSPAPQVAAVPTPVPAPALYPPLQSPS 122
EKEC+YY++T QCKFG+TCKFHHPQP+ + AV V Y P QS +
Sbjct: 150 EKECAYYLRTGQCKFGSTCKFHHPQPSNT----------MVAVRGSV-----YSPGQSVT 194
Query: 123 VPSAQQY-GVVVARPPLLHGSYVQGP-------YGPVLVSPSMFSLQGWSPYATSLNPIS 174
PS Y G V P S++ P Y V+V P + + GW+PYA + S
Sbjct: 195 SPSQHTYPGAVTNWPLSRSASFIASPRWPGHSSYAQVIVPPGLVQVPGWNPYAAQIG--S 252
Query: 175 SPGTGTQSSVGSSSIYGITQLSAS-APAYTGTYQSLPSSVGPSS--SSQKEHPFPERPGQ 231
S Q + G + Y ++ S + G + S + P + Q+E FPERP Q
Sbjct: 253 SSSDDQQRTAGGAQYYTGSRHSETPNMGDQGMFSSYQAGSVPLGLYTVQRESIFPERPDQ 312
Query: 232 QECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKF 291
ECQ+YMKTGDCKFG+ C+FHHP+E I+P + LS GLPLRPG CT Y + G+CKF
Sbjct: 313 PECQFYMKTGDCKFGAVCKFHHPKERIIPTPNCALSSLGLPLRPGEPICTFYSRYGICKF 372
Query: 292 GPACKFDHPMGMLSYSPSASSLADMPVAPYPVGSSIGTLAPSSASSDLRPELISGSSKDS 351
GP CKFDHPMG + Y + S D+ S+ LAP A S++ P+ +SG S+
Sbjct: 373 GPNCKFDHPMGTVMYGLATSPTGDV--------SARRMLAPVPAHSEVSPDNVSGRSRRI 424
Query: 352 VSTRMSSSVSISSGSVGS 369
S S I SG G+
Sbjct: 425 TH---SDSQQIPSGERGT 439
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 52/122 (42%), Gaps = 45/122 (36%)
Query: 224 PFPERPGQQECQYYMKTG------------------------------------------ 241
P+PER G+ +C YYM+TG
Sbjct: 52 PYPERIGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAVAAARMKGEYPQRIGQPECQYYL 111
Query: 242 ---DCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFD 298
CKFG++C+FHHPRE V L+ G PLRP C +Y++ G CKFG CKF
Sbjct: 112 KTGTCKFGATCKFHHPREKAAIATRVQLNALGYPLRPNEKECAYYLRTGQCKFGSTCKFH 171
Query: 299 HP 300
HP
Sbjct: 172 HP 173
>sp|Q9SWF9|ZFNL_PEA Zinc finger CCCH domain-containing protein ZFN-like OS=Pisum
sativum PE=2 SV=1
Length = 417
Score = 280 bits (715), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/348 (45%), Positives = 208/348 (59%), Gaps = 30/348 (8%)
Query: 9 GEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSY 68
GEFPER+GQP CQYY++TGTCK+GA+C++HHP+ AG V+LN GYPLRP E E +Y
Sbjct: 70 GEFPERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPNESERAY 129
Query: 69 YMKTRQCKFGATCKFHHPQPAGVPAPTPSPAPQVAAVPTPVPAPALYPPLQSPSVPSAQQ 128
Y++T QCKFG TCKFHHPQP+ + + +YP +QSP+ P Q
Sbjct: 130 YLRTGQCKFGNTCKFHHPQPSNMV--------------LSMRGSTVYPTVQSPTTPGQQS 175
Query: 129 YGVVVARPPLLHGSYV-----QGP--YGPVLVSPSMFSLQGWSPYATSLNPISSPGTGTQ 181
Y + SYV QGP Y P+++ + S+ GWS Y + S T
Sbjct: 176 YAAGITN--WSSSSYVPSPRWQGPSSYAPLILPQGVVSVPGWSTYGGQMGSESPQQTMRN 233
Query: 182 SSVGSSSIYGITQLSASAPAYTGTYQSLPSSVGPSSSSQKEHPFPERPGQQECQYYMKTG 241
+S G + + AY+ Y+S VG + Q+++ FPERP Q ECQ+YMKTG
Sbjct: 234 DQTYGTSHQGELENAGLQGAYS-QYRSGSVPVG-FYALQRDNIFPERPDQPECQFYMKTG 291
Query: 242 DCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFDHPM 301
DCKFG+ CRFHHPRE +P D LSP GLPLRPG C Y + G+CKFGP+CKFDHPM
Sbjct: 292 DCKFGAVCRFHHPRERQIPAPDCVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPM 351
Query: 302 GMLSYSPSASSLADMPVAPYPVGSSIGTLAPSSASSDLRPELISGSSK 349
G+ +Y+ AS LAD P +GSS GT A S +S L + SG++K
Sbjct: 352 GIFTYN-VASPLADTP-GRRLLGSSSGTAALSLSSEGL---VESGTAK 394
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 57/84 (67%)
Query: 217 SSSQKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPG 276
++++ + FPER GQ ECQYY+KTG CKFG++CRFHHP++ V L+ G PLRP
Sbjct: 64 ATARMKGEFPERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPN 123
Query: 277 AAPCTHYVQRGVCKFGPACKFDHP 300
+ +Y++ G CKFG CKF HP
Sbjct: 124 ESERAYYLRTGQCKFGNTCKFHHP 147
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Query: 216 SSSSQKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHP--RELIVPKMDVTLSPFGLPL 273
SS + + P+PE PG+ +C YY++TG C+FG++CRF+HP R+L + + P
Sbjct: 18 SSETMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIATARMKGE---FPE 74
Query: 274 RPGAAPCTHYVQRGVCKFGPACKFDHP 300
R G C +Y++ G CKFG C+F HP
Sbjct: 75 RLGQPECQYYLKTGTCKFGATCRFHHP 101
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 25/30 (83%)
Query: 57 YPLRPGEKECSYYMKTRQCKFGATCKFHHP 86
YP PGE +CSYY++T C+FGATC+F+HP
Sbjct: 27 YPEHPGEPDCSYYIRTGLCRFGATCRFNHP 56
>sp|Q2QT65|C3H66_ORYSJ Zinc finger CCCH domain-containing protein 66 OS=Oryza sativa
subsp. japonica GN=Os12g0405100 PE=2 SV=1
Length = 454
Score = 270 bits (691), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 159/374 (42%), Positives = 204/374 (54%), Gaps = 37/374 (9%)
Query: 3 AARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPG 62
AA GE+P RVGQP CQYY++TGTCK+GA+CK+HHPR+ A + V LN GYP+RP
Sbjct: 100 AAARMNGEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAALANRVQLNVLGYPMRPN 159
Query: 63 EKECSYYMKTRQCKFGATCKFHHPQPAGVPAPTPSPAPQVAAVPTPVPAPALYPPLQSPS 122
EKEC+YY++T QCKF +TCKFHHPQP+ + AV ++Y P QS +
Sbjct: 160 EKECAYYLRTGQCKFASTCKFHHPQPSNT----------MVAVRN-----SMYSPGQSAT 204
Query: 123 VPSAQQY-GVVVARPPLLHGSYVQGP-------YGPVLVSPSMFSLQGWSPYATSLNPIS 174
P Y G V S++ P Y V+V + + GW+PYA + S
Sbjct: 205 SPGQHTYPGAVTNWTLSRSASFIASPRWPGHSGYAQVIVPQGLVQVPGWNPYAAQMGS-S 263
Query: 175 SPGTGTQSSVGSSSIYGITQLSASAPAYTGTYQSLPSSVGPSS--SSQKEHPFPERPGQQ 232
SP ++ V ++ YG Q G YQS P + Q E+ FPERP Q
Sbjct: 264 SPDDQQRTPV-TTQYYGSRQSETGGMGDHGMYQSYQGGSVPVGVYTVQGENIFPERPDQP 322
Query: 233 ECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFG 292
ECQ+YMKTGDCKFG+ C+FHHP+E +VP + L+ GLPLRPG CT Y + G+CKFG
Sbjct: 323 ECQFYMKTGDCKFGAVCKFHHPKERLVPAPNCALNSLGLPLRPGEPVCTFYSRYGICKFG 382
Query: 293 PACKFDHPMGMLSYSPSASSLADMPVAPYPVGSSIGTLAPSSASSDLRPELISGSSKDSV 352
P CKFDHPMG L Y + S D+ Y L+PS + L+ G S S
Sbjct: 383 PNCKFDHPMGTLMYGSATSPRGDVSSMHY-------QLSPSPGHPGI---LLDGGSGRSH 432
Query: 353 STRMSSSVSISSGS 366
S S I SG
Sbjct: 433 RVPQSDSQQIPSGD 446
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Query: 218 SSQKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHP--RELIVPKMDVTLSPFGLPLRP 275
S + P+PER G+ +C YYM+TG C+FG +C+F+HP R+L V + P R
Sbjct: 56 ESMESTPYPERIGEPDCSYYMRTGLCRFGMTCKFNHPPNRKLAVAAARMNGE---YPYRV 112
Query: 276 GAAPCTHYVQRGVCKFGPACKFDHP 300
G C +Y++ G CKFG CKF HP
Sbjct: 113 GQPECQYYLKTGTCKFGATCKFHHP 137
>sp|Q5JLB5|C3H12_ORYSJ Zinc finger CCCH domain-containing protein 12 OS=Oryza sativa
subsp. japonica GN=Os01g0917400 PE=2 SV=2
Length = 439
Score = 253 bits (645), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/319 (43%), Positives = 187/319 (58%), Gaps = 30/319 (9%)
Query: 9 GEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSY 68
GE+PER+GQP CQYY++TGTCK+G +CK+HHPR+ AG V LN GYPLRP EKEC+Y
Sbjct: 120 GEYPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSEKECAY 179
Query: 69 YMKTRQCKFGATCKFHHPQPAGVPAPTPSPAPQVAAVPTPVPAPALYPPLQSPSVPSAQQ 128
Y+KT QCK+G TCKFHHP+ A+ + +P +YP + S S +
Sbjct: 180 YLKTGQCKYGNTCKFHHPE-------------LFNAMASSRGSP-IYPSVHS-SATAGPP 224
Query: 129 YGVVVARPPLLHGSYVQGP-------YGPVLVSPSMFSLQGWSPYATSLNPISSPGTGTQ 181
Y +A GS++ P Y P++V + + W+ Y + P+SS + Q
Sbjct: 225 YTGTMASWAFPRGSFIPSPRWQNPSNYAPMIVPQGLVQVPSWNSYTGQMMPVSSSESRLQ 284
Query: 182 SSVGSSSIYGITQLSASAPAYTGTYQSLPSSV--GPSSSSQKEHPFPERPGQQECQYYMK 239
S G+ YG +Q ++ G SS P + Q+E+ FPERP Q ECQYYMK
Sbjct: 285 SP-GAQQTYGTSQQVDASAGNQGMLSPYRSSSYPVPQYALQRENVFPERPDQPECQYYMK 343
Query: 240 TGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFDH 299
TGDCKFG+ C+FHHPR +P D LSP GLPLRPG C Y + G+CKFG CKFDH
Sbjct: 344 TGDCKFGAVCKFHHPRVRSMPTPDCVLSPVGLPLRPGEELCKFYSRYGICKFGANCKFDH 403
Query: 300 -----PMGMLSYSPSASSL 313
PMG+ +Y +++++
Sbjct: 404 PTMAPPMGVYAYGSASTNV 422
Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 56/84 (66%)
Query: 217 SSSQKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPG 276
+S++ + +PER GQ ECQYY+KTG CKFG +C+FHHPRE V L+ G PLRP
Sbjct: 114 ASARMKGEYPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPS 173
Query: 277 AAPCTHYVQRGVCKFGPACKFDHP 300
C +Y++ G CK+G CKF HP
Sbjct: 174 EKECAYYLKTGQCKYGNTCKFHHP 197
Score = 81.6 bits (200), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 224 PFPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHY 283
P+PER G+ +C YY++TG C+FG SCRF+HP++ + + P R G C +Y
Sbjct: 76 PYPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIASARMKG-EYPERMGQPECQYY 134
Query: 284 VQRGVCKFGPACKFDHP 300
++ G CKFGP CKF HP
Sbjct: 135 LKTGTCKFGPTCKFHHP 151
>sp|Q8GXX7|C3H33_ARATH Zinc finger CCCH domain-containing protein 33 OS=Arabidopsis
thaliana GN=ZFN1 PE=1 SV=1
Length = 397
Score = 250 bits (638), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/313 (41%), Positives = 178/313 (56%), Gaps = 35/313 (11%)
Query: 9 GEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSY 68
GE+PER+GQP C+YY++TGTCK+G +CK+HHPR AG VSLN GYPLR E +C+Y
Sbjct: 80 GEYPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDCAY 139
Query: 69 YMKTRQCKFGATCKFHHPQPAGVPAPTPSPAPQVAAVPTPVPAPALYPPLQSPSVPSAQQ 128
+++T CKFG TCKF+HPQP PT + VP++ Q
Sbjct: 140 FLRTGHCKFGGTCKFNHPQPQ----------------PTNM------------MVPTSGQ 171
Query: 129 YGVVVARPPLLHGSYVQGP--YGPVLVSPSMFSLQGWSPYATSLNPISSPGTGTQSSVGS 186
+R + Q P Y +++ + +QGW+PY+ L +S GTG + +
Sbjct: 172 QSYPWSRASFIASPRWQDPSSYASLIMPQGVVPVQGWNPYSGQLGSVSPSGTGNDQNYRN 231
Query: 187 SSIYGITQLSASAPAYTGTYQ---SLPSSVGPSSSSQKEHPFPERPGQQECQYYMKTGDC 243
+ + + Y S+P +G + +E+ FPERPGQ ECQ+YMKTGDC
Sbjct: 232 LQQNETIESGSQSQGSFSGYNPGSSVP--LGGYYALPRENVFPERPGQPECQFYMKTGDC 289
Query: 244 KFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFDHPMGM 303
KFG+ C+FHHPR+ P D LS GLPLRPG C Y + G+CKFGP+CKFDHPM +
Sbjct: 290 KFGTVCKFHHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYTRYGICKFGPSCKFDHPMRV 349
Query: 304 LSYSPSASSLADM 316
+Y +AS ++
Sbjct: 350 FTYDNTASETDEV 362
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Query: 216 SSSSQKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHP--RELIVPKMDVTLSPFGLPL 273
S + + +PERPG+ +C YY++TG C+FGS+CRF+HP REL++ + P
Sbjct: 28 SDETMETGSYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATARMRGE---YPE 84
Query: 274 RPGAAPCTHYVQRGVCKFGPACKFDHP 300
R G C +Y++ G CKFG CKF HP
Sbjct: 85 RIGQPECEYYLKTGTCKFGVTCKFHHP 111
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 31/40 (77%)
Query: 48 SNVSLNYYGYPLRPGEKECSYYMKTRQCKFGATCKFHHPQ 87
S+ ++ YP RPGE +CSYY++T C+FG+TC+F+HP+
Sbjct: 28 SDETMETGSYPERPGEPDCSYYIRTGLCRFGSTCRFNHPR 67
>sp|Q8L7N8|C3H57_ARATH Zinc finger CCCH domain-containing protein 57 OS=Arabidopsis
thaliana GN=ZFN3 PE=2 SV=2
Length = 375
Score = 227 bits (579), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 128/304 (42%), Positives = 171/304 (56%), Gaps = 58/304 (19%)
Query: 9 GEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSY 68
GE+PER+GQP C++Y++TGTCK+G +CK+HHPR AG +VS+N YPLRP E +CSY
Sbjct: 82 GEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSY 141
Query: 69 YMKTRQCKFGATCKFHHPQPAGVPAPTPSPAPQVAAVPTPVPAPALYPPLQSPSVPSAQQ 128
+++ QCKFG TCKF+HPQ T S V+ +PV Y LQS + +
Sbjct: 142 FLRIGQCKFGGTCKFNHPQ-------TQSTNLMVSVRGSPV-----YSALQSLTGQPSYS 189
Query: 129 YGVVVARPPLLHGSYVQGPYGPVLVSPSMFSLQGWSPYATSLNPISSPGTGTQSSVGSSS 188
+ S+V P P L PS F+ +G+Q + SS
Sbjct: 190 WSRT---------SFVANP--PRLQDPSGFA------------------SGSQGGLFSSG 220
Query: 189 IYGITQLSASAPAYTGTYQSLPSSVGPSSSSQKEHPFPERPGQQECQYYMKTGDCKFGSS 248
+ S P + +LP +E+ FPERPGQ ECQ+YMKTGDCKFG+
Sbjct: 221 FHS----GNSVPL---GFYALP----------RENVFPERPGQPECQFYMKTGDCKFGTV 263
Query: 249 CRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFDHPMGMLSYSP 308
C+FHHPR+ P D LS GLPLRPG C Y + G+CKFGP+CKFDHPM + +Y+
Sbjct: 264 CKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMRVFTYNN 323
Query: 309 SASS 312
+ +S
Sbjct: 324 NTAS 327
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 61/114 (53%), Gaps = 9/114 (7%)
Query: 212 SVGPSSSSQKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHP--RELIVPKMDVTLSPF 269
++G + + +PER G+ +C YY++TG C+FGS+CRF+HP R+L++ +
Sbjct: 26 NLGSDDTMGVDGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIKGE-- 83
Query: 270 GLPLRPGAAPCTHYVQRGVCKFGPACKFDHPMGMLSYSPSASSLADMPVAPYPV 323
P R G C Y++ G CKFG CKF HP S S + V YP+
Sbjct: 84 -YPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVS----VNVLSYPL 132
>sp|Q94AD9|C3H3_ARATH Zinc finger CCCH domain-containing protein 3 OS=Arabidopsis
thaliana GN=At1g04990 PE=2 SV=1
Length = 404
Score = 177 bits (450), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 110/294 (37%), Positives = 149/294 (50%), Gaps = 47/294 (15%)
Query: 10 EFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYY 69
E PER+GQP C+Y+++TG CKYG +CKYHHP+ G+ V N G P+R GEK C YY
Sbjct: 86 ELPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGA-QPVMFNVIGLPMRLGEKPCPYY 144
Query: 70 MKTRQCKFGATCKFHHPQPAGVPAPTPSPAPQVAAVPTPVPAPALYPPLQSPSVPSAQQY 129
++T C+FG CKFHHPQP A + PA L + + Y
Sbjct: 145 LRTGTCRFGVACKFHHPQPDN--------GHSTAYGMSSFPAADL---RYASGLTMMSTY 193
Query: 130 GVVVARPPLLHGSYVQGPYGPVLVSPSMFSL--QGWSPYATSLNPISSPGTGTQSSVGSS 187
G + P + SYV P+LVSPS L QGW+PY + S+
Sbjct: 194 GTLPR--PQVPQSYV-----PILVSPSQGFLPPQGWAPYMAA----------------SN 230
Query: 188 SIYGITQLSASAPAYTGTYQSLPSSVGPSSSSQKEHPFPERPGQQECQYYMKTGDCKFGS 247
S+Y + + P Y+G+ S+ +V + E Q EC+++M TG CK+G
Sbjct: 231 SMYNV----KNQPYYSGSSASMAMAVALNRG------LSESSDQPECRFFMNTGTCKYGD 280
Query: 248 SCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFDHPM 301
C++ HP I ++PF LP RPG C ++ G CKFGP CKFDHPM
Sbjct: 281 DCKYSHPGVRISQPPPSLINPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHPM 334
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 215 PSSSSQKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLR 274
P + + PER GQ +C+Y++KTG CK+G +C++HHP++ + V + GLP+R
Sbjct: 77 PQDVAYYKEELPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGAQ-PVMFNVIGLPMR 135
Query: 275 PGAAPCTHYVQRGVCKFGPACKFDHP 300
G PC +Y++ G C+FG ACKF HP
Sbjct: 136 LGEKPCPYYLRTGTCRFGVACKFHHP 161
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 61/99 (61%), Gaps = 3/99 (3%)
Query: 220 QKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAP 279
++ +P+P+RPG+++CQ+Y++TG C +GSSCR++HP L DV LP R G
Sbjct: 39 EELNPYPDRPGERDCQFYLRTGLCGYGSSCRYNHPTHL---PQDVAYYKEELPERIGQPD 95
Query: 280 CTHYVQRGVCKFGPACKFDHPMGMLSYSPSASSLADMPV 318
C ++++ G CK+GP CK+ HP P ++ +P+
Sbjct: 96 CEYFLKTGACKYGPTCKYHHPKDRNGAQPVMFNVIGLPM 134
>sp|Q5RJC5|C3H67_ARATH Zinc finger CCCH domain-containing protein 67 OS=Arabidopsis
thaliana GN=At5g63260 PE=2 SV=2
Length = 435
Score = 176 bits (447), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/324 (36%), Positives = 160/324 (49%), Gaps = 44/324 (13%)
Query: 1 MGAARAGGGEFPERVGQPV---CQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGY 57
+ R E E V P C+YY RTG CKYG SC++ H ++ S LN+ G
Sbjct: 132 LQIGRERVRERDEDVENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGL 191
Query: 58 PLRPGEKECSYYMKTRQCKFGATCKFHHPQPAGVPAPTPSPAPQVAAVPTPVPAPALYPP 117
P+RPGEKEC +YM+ CKFG+ CKF+HP P + V +P LY
Sbjct: 192 PIRPGEKECPFYMRNGSCKFGSDCKFNHPDPTAI-----------GGVDSP-----LYRG 235
Query: 118 LQSPSV-PSAQQYGVVVARPPLLHGSYVQGPYGPVLVSPSMFSLQGWSPYATSLNPISSP 176
S P A + H + G PSMF P++ + P +S
Sbjct: 236 NNGGSFSPKAPSQASSTSWSSTRHMNGT----GTAPFIPSMF------PHSRGVTPQASD 285
Query: 177 GTGTQSSVGSSSIYGITQLSASAPAYTGTYQSLPSSVGPSSSSQKEH-----PFPERPGQ 231
G Q+S S Y + +P +YQ S SS SQ +H FPERP Q
Sbjct: 286 WNGYQAS----SAYPPER----SPLAPSSYQVNNSLAETSSFSQYQHQMSVEEFPERPDQ 337
Query: 232 QECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKF 291
EC YY+KTGDCKF C++HHP+ + + + + GLPLRP + CTHY + G+CKF
Sbjct: 338 PECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYGICKF 397
Query: 292 GPACKFDHPMGMLSYSPSASSLAD 315
GPAC+FDH + ++SPS+S +
Sbjct: 398 GPACRFDHSIP-PTFSPSSSQTVE 420
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 10 EFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYY 69
EFPER QP C YY++TG CK+ CKYHHP+ + S N G PLRP + C++Y
Sbjct: 330 EFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHY 389
Query: 70 MKTRQCKFGATCKFHHPQPAGVPAPTPSPAPQVAA 104
+ CKFG C+F H P P +PS + V A
Sbjct: 390 SRYGICKFGPACRFDHSIP---PTFSPSSSQTVEA 421
Score = 85.1 bits (209), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 227 ERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQR 286
E P EC+YY +TG CK+G SCRF H +E P L+ GLP+RPG C Y++
Sbjct: 147 ENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRN 206
Query: 287 GVCKFGPACKFDHPMGMLSYSPSASSLADMPVAPYPVGSSIGTLAP 332
G CKFG CKF+HP P+A D P+ G S AP
Sbjct: 207 GSCKFGSDCKFNHP------DPTAIGGVDSPLYRGNNGGSFSPKAP 246
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 57 YPLRPGEKECSYYMKTRQCKFGATCKFHHP 86
YP+RP ++CS+YM+T CK+G++CKF+HP
Sbjct: 98 YPVRPDSEDCSFYMRTGSCKYGSSCKFNHP 127
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 272 PLRPGAAPCTHYVQRGVCKFGPACKFDHPM 301
P+RP + C+ Y++ G CK+G +CKF+HP+
Sbjct: 99 PVRPDSEDCSFYMRTGSCKYGSSCKFNHPV 128
>sp|Q9STM4|C3H43_ARATH Zinc finger CCCH domain-containing protein 43 OS=Arabidopsis
thaliana GN=At3g48440 PE=1 SV=1
Length = 448
Score = 173 bits (438), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/301 (37%), Positives = 151/301 (50%), Gaps = 56/301 (18%)
Query: 14 RVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTR 73
++G C+YY RTG CKYG +C+++H +G S LN+ G PLRPGE EC YYM+
Sbjct: 158 KLGLIDCKYYFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGEVECPYYMRNG 217
Query: 74 QCKFGATCKFHHPQPAGVPAPTPSPA---PQVAAVPTPVPAPALYPPLQSPSVPSAQQYG 130
CK+GA CKF+HP P + T SP+ ++ T P S S P
Sbjct: 218 SCKYGAECKFNHPDPTTIGG-TDSPSFRGNNGVSIGTFSPKATFQASSTSWSSPR----- 271
Query: 131 VVVARPPLLHGSYVQG--PYGPVLVSPSMFSLQGWSPYATSLNPISSPGTGTQSSVGSS- 187
+V G P+ PV++S + TS NP G Q+SV SS
Sbjct: 272 ------------HVNGTSPFIPVMLSQTHG--------VTSQNP---EWNGYQASVYSSE 308
Query: 188 -------SIYGITQLSASAPAYTGTYQ-SLPSSVGPSSSSQKEHPFPERPGQQECQYYMK 239
+ Y + SA Y+ +P+ FPERP Q EC YYMK
Sbjct: 309 RGVFSPSTTYLMNNSSAETSMLLSQYRHQMPA-----------EEFPERPDQPECSYYMK 357
Query: 240 TGDCKFGSSCRFHHPRELIVPKMD-VTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFD 298
TGDCKF +C++HHP+ + PK+ L+ GLPLRP CT+Y + G+CKFGPAC+FD
Sbjct: 358 TGDCKFKFNCKYHHPKNRL-PKLPPYALNDKGLPLRPDQNICTYYSRYGICKFGPACRFD 416
Query: 299 H 299
H
Sbjct: 417 H 417
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 48/76 (63%)
Query: 10 EFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYY 69
EFPER QP C YYM+TG CK+ +CKYHHP+ + +LN G PLRP + C+YY
Sbjct: 342 EFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQNICTYY 401
Query: 70 MKTRQCKFGATCKFHH 85
+ CKFG C+F H
Sbjct: 402 SRYGICKFGPACRFDH 417
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 86/185 (46%), Gaps = 59/185 (31%)
Query: 217 SSSQKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHP-------------RE------- 256
S ++ E+ +P RPG ++C +YM+TG CKFGSSC+F+HP RE
Sbjct: 99 SENESENVYPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVREKEDDGGK 158
Query: 257 --LI----------------------VPKMDVTLSP----FGLPLRPGAAPCTHYVQRGV 288
LI +PK + +P GLPLRPG C +Y++ G
Sbjct: 159 LGLIDCKYYFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGEVECPYYMRNGS 218
Query: 289 CKFGPACKFDHPMGMLSYSPSASSLADMPVAPYPVGSSIGTLAP-----SSASSDLRPEL 343
CK+G CKF+HP P+ D P G SIGT +P +S++S P
Sbjct: 219 CKYGAECKFNHP------DPTTIGGTDSPSFRGNNGVSIGTFSPKATFQASSTSWSSPRH 272
Query: 344 ISGSS 348
++G+S
Sbjct: 273 VNGTS 277
>sp|O48772|C3H26_ARATH Zinc finger CCCH domain-containing protein 26 OS=Arabidopsis
thaliana GN=ZFN2 PE=2 SV=1
Length = 453
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/335 (35%), Positives = 159/335 (47%), Gaps = 72/335 (21%)
Query: 10 EFPERVGQPVCQYYMRTGTCKYGASCKYHHP--RQGAGSVSNVSLNYYGYPLRPGEKECS 67
+ PERVGQP C+ TG CKYG +CKYHHP R GAG V N G P+R GEK C
Sbjct: 84 QLPERVGQPDCE----TGACKYGPTCKYHHPKDRNGAGPVL---FNVLGLPMRQGEKPCP 136
Query: 68 YYMKTRQCKFGATCKFHHPQPAGVPAPTPSP----------APQVAAVPTPVPAPALYPP 117
YYM+T C+FG CKFHHP P P+ S P + + PA Y
Sbjct: 137 YYMQTGLCRFGVACKFHHPHPHSQPSNGHSAYAMSSFPSVGFPYASGMTMVSLPPATYGA 196
Query: 118 LQSPSVPSAQQYGVVVARPPLLHGSYVQGPYGPVLVSPSMFSL--QGWSPYATSLNPISS 175
+ P VP +Q Y P +V+PS L QGW+ Y T+ NPI
Sbjct: 197 IPRPQVPQSQAYM-------------------PYMVAPSQGLLPPQGWATYMTASNPI-- 235
Query: 176 PGTGTQSSVGSSSIYGI-TQLSASAPAYTGTYQSLPSSVGPSSSSQKEHPFPERPGQQEC 234
Y + TQL +S+ S+ + + H F ER EC
Sbjct: 236 --------------YNMKTQLDSSS-----------SASVAVTVTSHHHSFSER---AEC 267
Query: 235 QYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGPA 294
+++M TG CK+G C++ HP+E ++ L+P LP RPG C ++ G CKFG
Sbjct: 268 RFFMNTGTCKYGDDCKYSHPKERLLQSPPTLLNPIVLPARPGQPACGNFKAYGFCKFGAN 327
Query: 295 CKFDHPMGMLSYSPSASSLADMPVAPYPVGSSIGT 329
CKFDH M + Y+ + +++ +P PYP + T
Sbjct: 328 CKFDHSMLLNPYNNTGLAMSSLPT-PYPYAPPVST 361
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 43/171 (25%)
Query: 216 SSSSQKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHP-----------RELIVPKMD- 263
+ ++ P+P+RPG+++CQ++++TG C +G+SCR++HP R+ + ++
Sbjct: 32 EDNMEQSSPYPDRPGERDCQFFLRTGQCGYGNSCRYNHPLTNLPQGIIYYRDQLPERVGQ 91
Query: 264 ---------------------------VTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACK 296
V + GLP+R G PC +Y+Q G+C+FG ACK
Sbjct: 92 PDCETGACKYGPTCKYHHPKDRNGAGPVLFNVLGLPMRQGEKPCPYYMQTGLCRFGVACK 151
Query: 297 FD--HPMGMLSYSPSASSLADMPVA--PYPVGSSIGTLAPSSASSDLRPEL 343
F HP S SA +++ P PY G ++ +L P++ + RP++
Sbjct: 152 FHHPHPHSQPSNGHSAYAMSSFPSVGFPYASGMTMVSLPPATYGAIPRPQV 202
>sp|Q2QTY2|C3H65_ORYSJ Zinc finger CCCH domain-containing protein 65 OS=Oryza sativa
subsp. japonica GN=Os12g0278800 PE=2 SV=1
Length = 529
Score = 165 bits (418), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 153/314 (48%), Gaps = 41/314 (13%)
Query: 1 MGAARAGGGEF-PERVGQPVCQYYMRTGTCKYGASCKYHHP--RQGAGSVSNVSLNYYGY 57
+ A+ EF E Q C+YY G CK+G +CKY H ++G V LN+ G
Sbjct: 223 LKVAKEKRKEFISEGSSQEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGL 282
Query: 58 PLRPGEKECSYYMKTRQCKFGATCKFHHPQPAGVPAPTPSPAPQVAAVP-------TPVP 110
PLRPGEKEC YYM+T CK+ CKFHHP P+ V + P + P + P
Sbjct: 283 PLRPGEKECPYYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQP 342
Query: 111 APALYPPLQSPSVPSAQQYGVVVARPPLLHGSYVQGPYGPVLVSPSMFSLQGWSPY-ATS 169
+++P ++ + + +A P SY G +L M+ W+ Y
Sbjct: 343 NASIWPDQRT----VNEHHVPFIAPSP----SYSAG----MLPPQGMYPPPEWNGYHQVP 390
Query: 170 LNPISSPGTGTQSSVGSSSIYGITQLSASAPAYTGTYQSLPSSVGPSSSSQKEHPFPERP 229
LNP PG Q + I AP G +Q +PS +PERP
Sbjct: 391 LNPYYPPGVPFQHFPAAP----INHPMYKAPEIPG-HQQVPSEE-----------YPERP 434
Query: 230 GQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVC 289
GQ ECQ+++K+G CKF C++HHPR + P LSP GLP++P CT+Y + GVC
Sbjct: 435 GQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAG--ALSPLGLPIKPDQPVCTYYGRYGVC 492
Query: 290 KFGPACKFDHPMGM 303
KFGPAC ++HP
Sbjct: 493 KFGPACAYNHPFNF 506
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 225 FPERPGQQECQYYMKTGDCKFGSSCRFHHP 254
FP RPG+ +C YY+K G C+FG C+F+HP
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHP 134
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 57 YPLRPGEKECSYYMKTRQCKFGATCKFHHP 86
+P RPGE +C+YY+K C+FG CKF+HP
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHP 134
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 11 FPERVGQPVCQYYMRTGTCKYGASCKYHHP 40
FP R G+P C YY++ G+C++G CK++HP
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHP 134
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 271 LPLRPGAAPCTHYVQRGVCKFGPACKFDHP 300
P RPG CT+YV+ G C+FG CKF+HP
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHP 134
>sp|Q941Q3|C3H37_ARATH Zinc finger CCCH domain-containing protein 37 OS=Arabidopsis
thaliana GN=HUA1 PE=1 SV=1
Length = 524
Score = 164 bits (416), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 113/308 (36%), Positives = 159/308 (51%), Gaps = 46/308 (14%)
Query: 10 EFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYY 69
E+PER G+P C YY++T CKYG+ CK++HPR+ A +VS + + P RP E C++Y
Sbjct: 221 EYPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEA-AVSVETQD--SLPERPSEPMCTFY 277
Query: 70 MKTRQCKFGATCKFHHPQPAGVPAPTPSPAPQVAAVPTPVPAPALYPPLQSPSVPSAQQY 129
MKT +CKFG +CKFHHP+ +P+ + V S P A
Sbjct: 278 MKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLT----------------SEPDATNN 321
Query: 130 GVVVARPPLLHGSY--------VQGPYGPVLVSPSMFSLQGWS-PYATSLNPISSPGTGT 180
V P L H S V P+ S + ++ P T+ P ++ G
Sbjct: 322 PHVTFTPALYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAA---GV 378
Query: 181 QSSVGSSSIYGITQLSASAPAYTGTYQSLPS-SVGPSSSSQKEHPFPERPGQQECQYYMK 239
S+ SS+ + L PA T YQ+L ++G S++ +P+RPGQ EC YYMK
Sbjct: 379 NYSLVSSNTANL-NLGLVTPA-TSFYQTLTQPTLGVISAT-----YPQRPGQSECDYYMK 431
Query: 240 TGDCKFGSSCRFHHPRELI------VPKM-DVTLSPFGLPLRPGAAPCTHYVQRGVCKFG 292
TG+CKFG C+FHHP + + P+ +V LS G P R GA C +Y++ G CK+G
Sbjct: 432 TGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKTGTCKYG 491
Query: 293 PACKFDHP 300
CKFDHP
Sbjct: 492 ATCKFDHP 499
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 60/104 (57%), Gaps = 7/104 (6%)
Query: 11 FPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVS-------NVSLNYYGYPLRPGE 63
+P+R GQ C YYM+TG CK+G CK+HHP +++ NV L+ GYP R G
Sbjct: 417 YPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGA 476
Query: 64 KECSYYMKTRQCKFGATCKFHHPQPAGVPAPTPSPAPQVAAVPT 107
C YYMKT CK+GATCKF HP P V A T S A A T
Sbjct: 477 LNCPYYMKTGTCKYGATCKFDHPPPGEVMAKTTSEADAAGATNT 520
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 14/114 (12%)
Query: 225 FPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYV 284
+PERPG+ +C YY+KT CK+GS C+F+HPRE ++ S LP RP CT Y+
Sbjct: 222 YPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQDS---LPERPSEPMCTFYM 278
Query: 285 QRGVCKFGPACKFDHPMGMLSYSPSASSLADMPVAPYPVGSSIGTLAPSSASSD 338
+ G CKFG +CKF HP + +P + +GSS+G + A+++
Sbjct: 279 KTGKCKFGLSCKFHHPKDI-----------QLPSSSQDIGSSVGLTSEPDATNN 321
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 27/144 (18%)
Query: 218 SSQKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVP--------------KMD 263
S + + PERP + C +YMKTG CKFG SC+FHHP+++ +P + D
Sbjct: 258 SVETQDSLPERPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPD 317
Query: 264 VTLSPF------------GLPLRPGAAPCTHYVQRGVCKFGPACKFDHPMGMLSYSPSAS 311
T +P GLP+R G C Y++ G CK+G C+++HP ++ P A+
Sbjct: 318 ATNNPHVTFTPALYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHPE-RTAFIPQAA 376
Query: 312 SLADMPVAPYPVGSSIGTLAPSSA 335
+ V+ ++G + P+++
Sbjct: 377 GVNYSLVSSNTANLNLGLVTPATS 400
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 61/107 (57%), Gaps = 16/107 (14%)
Query: 11 FPERVGQPVCQYYMRTGTCKYGASCKYHHP----------RQGAGSVSNVSLNYYGYPLR 60
+P+R G+ C +YM+T TCK+G SC++ HP + A V N YP R
Sbjct: 171 YPQRAGEKDCTHYMQTRTCKFGESCRFDHPIWVPEGGIPDWKEAPVVPNEE-----YPER 225
Query: 61 PGEKECSYYMKTRQCKFGATCKFHHP-QPAGVPAPTPSPAPQVAAVP 106
PGE +C YY+KT++CK+G+ CKF+HP + A V T P+ + P
Sbjct: 226 PGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQDSLPERPSEP 272
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 10/104 (9%)
Query: 225 FPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKM---DVTLSPF----GLPLRPGA 277
+P+R G+++C +YM+T CKFG SCRF HP + VP+ D +P P RPG
Sbjct: 171 YPQRAGEKDCTHYMQTRTCKFGESCRFDHP--IWVPEGGIPDWKEAPVVPNEEYPERPGE 228
Query: 278 APCTHYVQRGVCKFGPACKFDHPMGMLSYS-PSASSLADMPVAP 320
C +Y++ CK+G CKF+HP + S + SL + P P
Sbjct: 229 PDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQDSLPERPSEP 272
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 34/115 (29%)
Query: 225 FPERPGQQECQYYMKTGDCKFGSSCRFHHP-RELIVPK---------------------- 261
P R G+ +C +Y+KTG CK+G++CR++HP R +P+
Sbjct: 337 LPVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAAGVNYSLVSSNTANLNLGLVT 396
Query: 262 ------MDVTLSPFGL-----PLRPGAAPCTHYVQRGVCKFGPACKFDHPMGMLS 305
+T G+ P RPG + C +Y++ G CKFG CKF HP LS
Sbjct: 397 PATSFYQTLTQPTLGVISATYPQRPGQSECDYYMKTGECKFGERCKFHHPADRLS 451
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 260 PKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFDHPMGM 303
PK++ T P R G CTHY+Q CKFG +C+FDHP+ +
Sbjct: 160 PKLESTSHLPIYPQRAGEKDCTHYMQTRTCKFGESCRFDHPIWV 203
>sp|Q5ZDJ6|C3H8_ORYSJ Zinc finger CCCH domain-containing protein 8 OS=Oryza sativa subsp.
japonica GN=Os01g0616400 PE=2 SV=2
Length = 462
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 151/313 (48%), Gaps = 40/313 (12%)
Query: 11 FPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYG-------YPLRPGE 63
+PE+ G+P C ++M+TG CK+G+ CK++HP++ ++++ + N P+RP E
Sbjct: 153 YPEQEGEPDCPFFMKTGKCKFGSKCKFNHPKEKVNALASGNTNDKHLIADSSILPVRPSE 212
Query: 64 KECSYYMKTRQCKFGATCKFHHPQPAGVPAPTPSPAPQVAA---VPTPVPAPALYPPLQS 120
CS+Y KT +CKF A CKF+HP+ +P+ P V A ++ +Q+
Sbjct: 213 PLCSFYAKTGKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETDIGSAADSVSAKMQT 272
Query: 121 PSVPSAQQYGVVVARPPLLHGSYVQGPYGPVLVSPSMFSLQGWS-PYATSLN---PISSP 176
P V +AQ++ P+ G V P+ + S S ++ P LN P+
Sbjct: 273 P-VAAAQEFNSKGL--PMRPGE-VDCPFYMKMGSCKFGSTCRFNHPDRLVLNFPLPLGQT 328
Query: 177 GTGTQSSVGSSSIYGITQLSASAPAYTGTYQSLPSSVGPSSSSQKEHPFPERPGQQECQY 236
T S+ +S Q + +P GP + +P+RPG C +
Sbjct: 329 ILPTPESMLLNSSANFMQ------GFDFHAAHMPVGPGPVT-------YPQRPGATVCDF 375
Query: 237 YMKTGDCKFGSSCRFHHPRELIVP---------KMDVTLSPFGLPLRPGAAPCTHYVQRG 287
YMKTG CKF C+FHHP + P + V L+ GLP R A C Y++ G
Sbjct: 376 YMKTGFCKFADRCKFHHPIDRSAPDPSANWEPAEESVQLTLAGLPRREDAVVCAFYMKTG 435
Query: 288 VCKFGPACKFDHP 300
VCKFG CKFDHP
Sbjct: 436 VCKFGMQCKFDHP 448
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 47/87 (54%), Gaps = 9/87 (10%)
Query: 11 FPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAG---------SVSNVSLNYYGYPLRP 61
+P+R G VC +YM+TG CK+ CK+HHP + + +V L G P R
Sbjct: 364 YPQRPGATVCDFYMKTGFCKFADRCKFHHPIDRSAPDPSANWEPAEESVQLTLAGLPRRE 423
Query: 62 GEKECSYYMKTRQCKFGATCKFHHPQP 88
C++YMKT CKFG CKF HP P
Sbjct: 424 DAVVCAFYMKTGVCKFGMQCKFDHPPP 450
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 37/157 (23%)
Query: 188 SIYGITQLSASAPAYTGTYQSLPSSVGPSSSSQKEHPFPERPGQQECQYYMKTGDCKFGS 247
++ G T + ++A + + Q+ P + +S+ P RPG+ +C +YMK G CKFGS
Sbjct: 252 TVEGETDIGSAADSVSAKMQT-PVAAAQEFNSKG---LPMRPGEVDCPFYMKMGSCKFGS 307
Query: 248 SCRFHHPRELIV---------------------------------PKMDVTLSPFGLPLR 274
+CRF+HP L++ M V P P R
Sbjct: 308 TCRFNHPDRLVLNFPLPLGQTILPTPESMLLNSSANFMQGFDFHAAHMPVGPGPVTYPQR 367
Query: 275 PGAAPCTHYVQRGVCKFGPACKFDHPMGMLSYSPSAS 311
PGA C Y++ G CKF CKF HP+ + PSA+
Sbjct: 368 PGATVCDFYMKTGFCKFADRCKFHHPIDRSAPDPSAN 404
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 72/147 (48%), Gaps = 28/147 (19%)
Query: 222 EHPFPERPGQQECQYYMKTGDCKFGSSCRFHHPRELI-------VPKMDVTLSPFGLPLR 274
E +PE+ G+ +C ++MKTG CKFGS C+F+HP+E + + LP+R
Sbjct: 150 EESYPEQEGEPDCPFFMKTGKCKFGSKCKFNHPKEKVNALASGNTNDKHLIADSSILPVR 209
Query: 275 PGAAPCTHYVQRGVCKFGPACKFDHPMGMLSYSPSASSLADMPVAPYPVGSSIGTLAPSS 334
P C+ Y + G CKF CKF+HP + PS+ + P S
Sbjct: 210 PSEPLCSFYAKTGKCKFRAMCKFNHPKDI--EIPSSQN------------------EPES 249
Query: 335 ASSDLRPELISGSSKDSVSTRMSSSVS 361
A + + E GS+ DSVS +M + V+
Sbjct: 250 AVT-VEGETDIGSAADSVSAKMQTPVA 275
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 11/85 (12%)
Query: 11 FPERVGQPVCQYYMRTGTCKYGASCKYHHPR--------QGAGSVSNVSLNYYGYPLRPG 62
+P+R G+ C +YM T TCK+G SCK+ HP+ +NV + YP + G
Sbjct: 102 YPQRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEQAANVEES---YPEQEG 158
Query: 63 EKECSYYMKTRQCKFGATCKFHHPQ 87
E +C ++MKT +CKFG+ CKF+HP+
Sbjct: 159 EPDCPFFMKTGKCKFGSKCKFNHPK 183
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 18/184 (9%)
Query: 225 FPERPGQQECQYYMKTGDCKFGSSCRFHHPR---ELIVP--KMDVTLSPFGLPLRPGAAP 279
+P+RPG+++C +YM T CKFG SC+F HP+ E +P K P + G
Sbjct: 102 YPQRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEQAANVEESYPEQEGEPD 161
Query: 280 CTHYVQRGVCKFGPACKFDHPMGMLSYSPSASSLADMPVAPYPVGSSIGTLAPSSASSDL 339
C +++ G CKFG CKF+HP ++ S ++ +A SSI + PS
Sbjct: 162 CPFFMKTGKCKFGSKCKFNHPKEKVNALASGNTNDKHLIA----DSSILPVRPSEPLCSF 217
Query: 340 RPELISGSSKDSVSTRMSSSVSISSGSVGSILSKSGPVPHSSMQQSGQSSGPSTADDSSA 399
+ +G K + + I + S P S++ G++ S AD SA
Sbjct: 218 YAK--TGKCKFRAMCKFNHPKDIE-------IPSSQNEPESAVTVEGETDIGSAADSVSA 268
Query: 400 EART 403
+ +T
Sbjct: 269 KMQT 272
>sp|Q5Z5Q3|C3H43_ORYSJ Zinc finger CCCH domain-containing protein 43 OS=Oryza sativa
subsp. japonica GN=Os06g0520600 PE=2 SV=1
Length = 711
Score = 95.1 bits (235), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 21/97 (21%)
Query: 225 FPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVP--------------------KMD- 263
FP RPG+ +C YY+K G CKFG +CRF+HP + VP K++
Sbjct: 87 FPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSKVEQ 146
Query: 264 VTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFDHP 300
V L+ GLPLRPG C++Y+ RG+CKFG CKFDHP
Sbjct: 147 VKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHP 183
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 52/100 (52%), Gaps = 21/100 (21%)
Query: 10 EFPERVGQPVCQYYMRTGTCKYGASCKYHHP---------------------RQGAGSVS 48
+FP R G+P C YY++ G+CK+G +C+++HP +G V
Sbjct: 86 QFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSKVE 145
Query: 49 NVSLNYYGYPLRPGEKECSYYMKTRQCKFGATCKFHHPQP 88
V LN G PLRPG CSYYM CKFG CKF HP P
Sbjct: 146 QVKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHPDP 185
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Query: 2 GAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHP----RQGAGSVSNVSLNYYGY 57
G + + P R G+P C YY++ G+CK+G SC Y+HP + GA +
Sbjct: 32 GKTKKVEEQHPRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAE----QF 87
Query: 58 PLRPGEKECSYYMKTRQCKFGATCKFHHP 86
P RPGE +CSYY+K CKFG C+F+HP
Sbjct: 88 PRRPGEPDCSYYVKFGSCKFGMNCRFNHP 116
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 210 PSSVGPSSSSQKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPF 269
P G + +++HP RPG+ +C YY+K G CKFG SC ++HP D
Sbjct: 28 PPVAGKTKKVEEQHP--RRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAE 85
Query: 270 GLPLRPGAAPCTHYVQRGVCKFGPACKFDHP 300
P RPG C++YV+ G CKFG C+F+HP
Sbjct: 86 QFPRRPGEPDCSYYVKFGSCKFGMNCRFNHP 116
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 11 FPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAG 45
P R G +C YYM G CK+G +CK+ HP G+
Sbjct: 154 LPLRPGTGLCSYYMNRGICKFGTNCKFDHPDPGSD 188
>sp|Q3ECU8|C3H13_ARATH Zinc finger CCCH domain-containing protein 13 OS=Arabidopsis
thaliana GN=At1g48195 PE=4 SV=1
Length = 82
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 222 EHPFPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCT 281
E FPERPG+ EC YY++TG+C +C++HHP+ + + TL+ GLPLRPG A C
Sbjct: 3 EEKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAICP 62
Query: 282 HYVQRGVCKFGPACKFDH 299
HY + G+C+ GP CKFDH
Sbjct: 63 HYSRFGICRSGPTCKFDH 80
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%)
Query: 10 EFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYY 69
+FPER G+P C YY+RTG C +CKYHHP+ S +LN G PLRPG+ C +Y
Sbjct: 5 KFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAICPHY 64
Query: 70 MKTRQCKFGATCKFHH 85
+ C+ G TCKF H
Sbjct: 65 SRFGICRSGPTCKFDH 80
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 57 YPLRPGEKECSYYMKTRQCKFGATCKFHHPQ 87
+P RPGE ECSYY++T C CK+HHP+
Sbjct: 6 FPERPGEPECSYYLRTGNCYLKQNCKYHHPK 36
Score = 33.5 bits (75), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 266 LSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFDHPMGMLSYSPSASSLAD--MPVAP 320
+S P RPG C++Y++ G C CK+ HP + P +L D +P+ P
Sbjct: 1 MSEEKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQC-TLNDKGLPLRP 56
>sp|Q0DBW8|C3H42_ORYSJ Zinc finger CCCH domain-containing protein 42 OS=Oryza sativa
subsp. japonica GN=Os06g0519400 PE=2 SV=1
Length = 279
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 56/108 (51%), Gaps = 23/108 (21%)
Query: 3 AARAGGG---EFPERVGQPVCQYYMRTGTCKYGASCKYHHP------------------- 40
A AGG E P+R G+ C +Y+R G CKYG +C+++HP
Sbjct: 106 AKHAGGCDKLEHPQRPGEHDCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCH 165
Query: 41 -RQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGATCKFHHPQ 87
+G +V LN+ G PLRPG CSYYM CKFG+ CKFHHP
Sbjct: 166 HSEGKSEAEHVKLNFLGLPLRPGTGLCSYYMNRGICKFGSNCKFHHPN 213
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 20/95 (21%)
Query: 226 PERPGQQECQYYMKTGDCKFGSSCRFHHP------RELIVPKM--------------DVT 265
P+RPG+ +C +Y++ G CK+G +CRF+HP +++ P V
Sbjct: 118 PQRPGEHDCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAEHVK 177
Query: 266 LSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFDHP 300
L+ GLPLRPG C++Y+ RG+CKFG CKF HP
Sbjct: 178 LNFLGLPLRPGTGLCSYYMNRGICKFGSNCKFHHP 212
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 10 EFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYY 69
E+P R G P C YY+ G+CK+G C Y+HP + AG + +P RPGE +C +Y
Sbjct: 75 EYPRRPGVPDCSYYVEFGSCKFGMRCLYNHPAKHAGGCDKLE-----HPQRPGEHDCLHY 129
Query: 70 MKTRQCKFGATCKFHHP 86
++ +CK+G C+F+HP
Sbjct: 130 LRFGRCKYGMNCRFNHP 146
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 225 FPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYV 284
+P RPG +C YY++ G CKFG C ++HP K P RPG C HY+
Sbjct: 76 YPRRPGVPDCSYYVEFGSCKFGMRCLYNHP-----AKHAGGCDKLEHPQRPGEHDCLHYL 130
Query: 285 QRGVCKFGPACKFDHP 300
+ G CK+G C+F+HP
Sbjct: 131 RFGRCKYGMNCRFNHP 146
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 11 FPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAG 45
P R G +C YYM G CK+G++CK+HHP G+G
Sbjct: 183 LPLRPGTGLCSYYMNRGICKFGSNCKFHHPNSGSG 217
>sp|Q9C7P4|C3H9_ARATH Putative zinc finger CCCH domain-containing protein 9
OS=Arabidopsis thaliana GN=At1g29570 PE=4 SV=1
Length = 321
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 14/67 (20%)
Query: 224 PFPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHY 283
P+P RPG+++CQ+Y+K G C++ SSCRF+HP T P LP+R C H
Sbjct: 51 PYPVRPGKKDCQFYLKNGLCRYRSSCRFNHP----------TQRPQELPVR----ICKHI 96
Query: 284 VQRGVCK 290
+ R V +
Sbjct: 97 MDRNVAE 103
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 29/39 (74%), Gaps = 2/39 (5%)
Query: 57 YPLRPGEKECSYYMKTRQCKFGATCKFHHP--QPAGVPA 93
YP+RPG+K+C +Y+K C++ ++C+F+HP +P +P
Sbjct: 52 YPVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQRPQELPV 90
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 11 FPERVGQPVCQYYMRTGTCKYGASCKYHHP 40
+P R G+ CQ+Y++ G C+Y +SC+++HP
Sbjct: 52 YPVRPGKKDCQFYLKNGLCRYRSSCRFNHP 81
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 272 PLRPGAAPCTHYVQRGVCKFGPACKFDHP 300
P+RPG C Y++ G+C++ +C+F+HP
Sbjct: 53 PVRPGKKDCQFYLKNGLCRYRSSCRFNHP 81
>sp|A3CEM4|C3H64_ORYSJ Putative zinc finger CCCH domain-containing protein 64 OS=Oryza
sativa subsp. japonica GN=Os12g0129500 PE=4 SV=2
Length = 527
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 10 EFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQ 42
++PER G+P C+YYM+ G CK+ CKY+HP+
Sbjct: 209 QYPERPGEPFCRYYMKFGECKHMTFCKYNHPKD 241
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 26/32 (81%)
Query: 225 FPERPGQQECQYYMKTGDCKFGSSCRFHHPRE 256
+PERPG+ C+YYMK G+CK + C+++HP++
Sbjct: 210 YPERPGEPFCRYYMKFGECKHMTFCKYNHPKD 241
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 57 YPLRPGEKECSYYMKTRQCKFGATCKFHHPQ 87
YP RPGE C YYMK +CK CK++HP+
Sbjct: 210 YPERPGEPFCRYYMKFGECKHMTFCKYNHPK 240
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 272 PLRPGAAPCTHYVQRGVCKFGPACKFDHPMGMLS 305
P RPG C +Y++ G CK CK++HP S
Sbjct: 211 PERPGEPFCRYYMKFGECKHMTFCKYNHPKDRFS 244
>sp|Q9QXP6|MKRN1_MOUSE E3 ubiquitin-protein ligase makorin-1 OS=Mus musculus GN=Mkrn1 PE=2
SV=1
Length = 481
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 18/87 (20%)
Query: 231 QQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCK 290
Q C+Y+M G CK G +CR+ H D++ SP+G+ + Y QRG C
Sbjct: 58 QVTCRYFMH-GVCKEGDNCRYSH---------DLSDSPYGVVCK--------YFQRGYCV 99
Query: 291 FGPACKFDHPMGMLSYSPSASSLADMP 317
+G C+++H + +A+ L+ P
Sbjct: 100 YGDRCRYEHSKPLKQEEVTATDLSAKP 126
Score = 33.1 bits (74), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 18/72 (25%)
Query: 17 QPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCK 76
Q C+Y+M G CK G +C+Y H ++S + YG C Y+ + C
Sbjct: 58 QVTCRYFMH-GVCKEGDNCRYSH---------DLSDSPYGVV-------CKYFQRG-YCV 99
Query: 77 FGATCKFHHPQP 88
+G C++ H +P
Sbjct: 100 YGDRCRYEHSKP 111
>sp|Q9C7P1|C3H10_ARATH Putative zinc finger CCCH domain-containing protein 10
OS=Arabidopsis thaliana GN=At1g29600/At1g29610 PE=2 SV=2
Length = 389
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 17/77 (22%)
Query: 225 FPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAA-PCTHY 283
+P RPG+ C +YMK C++GS C ++HP P ++ P R G C
Sbjct: 128 YPVRPGEDNCLFYMKNHLCEWGSECCYNHP-----PLQEI-------PCRIGKKLDCKA- 174
Query: 284 VQRGVCKFGPACKFDHP 300
G CK G C F+HP
Sbjct: 175 ---GACKRGSNCPFNHP 188
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 56 GYPLRPGEKECSYYMKTRQCKFGATCKFHHPQPAGVP 92
YP+RPGE C +YMK C++G+ C ++HP +P
Sbjct: 127 AYPVRPGEDNCLFYMKNHLCEWGSECCYNHPPLQEIP 163
Score = 41.2 bits (95), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 18/88 (20%)
Query: 11 FPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEK-ECSYY 69
+P R G+ C +YM+ C++G+ C Y+HP P R G+K +C
Sbjct: 128 YPVRPGEDNCLFYMKNHLCEWGSECCYNHP------------PLQEIPCRIGKKLDC--- 172
Query: 70 MKTRQCKFGATCKFHHPQPA-GVPAPTP 96
K CK G+ C F+HP+ G P P
Sbjct: 173 -KAGACKRGSNCPFNHPKERDGDSLPMP 199
>sp|Q9TT91|MKRN1_MACEU E3 ubiquitin-protein ligase makorin-1 OS=Macropus eugenii GN=MKRN1
PE=2 SV=1
Length = 478
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 21/90 (23%)
Query: 231 QQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCK 290
Q C+Y+M G CK G++CR+ H D++ S + R Y QRG C
Sbjct: 54 QVTCRYFMH-GVCKKGNNCRYSH---------DLSTSQSAMVCR--------YYQRGCCA 95
Query: 291 FGPACKFDHPMGMLSYSPSASSLA---DMP 317
+G C+++H + +A++LA D+P
Sbjct: 96 YGDRCRYEHTKPLKREEVTAANLAAKSDLP 125
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 43/111 (38%), Gaps = 18/111 (16%)
Query: 17 QPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCK 76
Q C+Y+M G CK G +C+Y H + S C YY + C
Sbjct: 54 QVTCRYFMH-GVCKKGNNCRYSHDLSTSQSAMV----------------CRYYQRG-CCA 95
Query: 77 FGATCKFHHPQPAGVPAPTPSPAPQVAAVPTPVPAPALYPPLQSPSVPSAQ 127
+G C++ H +P T + + +P PAL PL S A+
Sbjct: 96 YGDRCRYEHTKPLKREEVTAANLAAKSDLPASSSLPALVEPLAEVSTGEAE 146
>sp|Q8JFF3|MKRN1_SERQU Probable E3 ubiquitin-protein ligase makorin-1 OS=Seriola
quinqueradiata GN=mkrn1 PE=2 SV=1
Length = 435
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 29/104 (27%)
Query: 19 VCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFG 78
C+Y+M G CK G +C+Y H + +P C ++ K C FG
Sbjct: 23 TCRYFMH-GLCKEGDNCRYSHDLTNS---------------KPAAMICKFFQKG-NCVFG 65
Query: 79 ATCKFHHPQPAG---VPAPTPSPAPQVAAV---------PTPVP 110
C+F H +PA +PAP P P + PTPVP
Sbjct: 66 DRCRFEHCKPAKNEELPAPQMLPLPSASLAGPSDPEPSGPTPVP 109
Score = 40.4 bits (93), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 17/66 (25%)
Query: 234 CQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGP 293
C+Y+M G CK G +CR+ H D+T S +P A C + Q+G C FG
Sbjct: 24 CRYFMH-GLCKEGDNCRYSH---------DLTNS------KPAAMICK-FFQKGNCVFGD 66
Query: 294 ACKFDH 299
C+F+H
Sbjct: 67 RCRFEH 72
>sp|Q4SRI6|MKRN1_TETNG Probable E3 ubiquitin-protein ligase makorin-1 OS=Tetraodon
nigroviridis GN=mkrn1 PE=3 SV=1
Length = 372
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 17/66 (25%)
Query: 234 CQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGP 293
C+Y+M G CK G +CR+ H D+T S +P A C + Q+G C FG
Sbjct: 24 CRYFMH-GLCKEGDNCRYSH---------DLTNS------KPAAMICK-FFQKGNCVFGE 66
Query: 294 ACKFDH 299
C+FDH
Sbjct: 67 RCRFDH 72
Score = 35.8 bits (81), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 17/69 (24%)
Query: 20 CQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGA 79
C+Y+M G CK G +C+Y H + +P C ++ K C FG
Sbjct: 24 CRYFMH-GLCKEGDNCRYSHDLTNS---------------KPAAMICKFFQKG-NCVFGE 66
Query: 80 TCKFHHPQP 88
C+F H +P
Sbjct: 67 RCRFDHCKP 75
>sp|Q9UHC7|MKRN1_HUMAN E3 ubiquitin-protein ligase makorin-1 OS=Homo sapiens GN=MKRN1 PE=1
SV=3
Length = 482
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 18/83 (21%)
Query: 231 QQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCK 290
Q C+Y+M G CK G +CR+ H D++ SP+ + + Y QRG C
Sbjct: 58 QVTCRYFMH-GVCKEGDNCRYSH---------DLSDSPYSVVCK--------YFQRGYCI 99
Query: 291 FGPACKFDHPMGMLSYSPSASSL 313
+G C+++H + +A+ L
Sbjct: 100 YGDRCRYEHSKPLKQEEATATEL 122
Score = 32.0 bits (71), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 18/82 (21%)
Query: 17 QPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCK 76
Q C+Y+M G CK G +C+Y H + P C Y+ + C
Sbjct: 58 QVTCRYFMH-GVCKEGDNCRYSHDLSDS----------------PYSVVCKYFQRG-YCI 99
Query: 77 FGATCKFHHPQPAGVPAPTPSP 98
+G C++ H +P T +
Sbjct: 100 YGDRCRYEHSKPLKQEEATATE 121
>sp|Q5NU14|MKRN1_TAKRU Probable E3 ubiquitin-protein ligase makorin-1 OS=Takifugu rubripes
GN=mkrn1 PE=2 SV=1
Length = 429
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 17/66 (25%)
Query: 234 CQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGP 293
C+Y+M G CK G +CR+ H D+T S +P A C + Q+G C FG
Sbjct: 24 CRYFMH-GLCKEGDNCRYSH---------DLTSS------KPAAMMCK-FFQKGNCVFGE 66
Query: 294 ACKFDH 299
C+F+H
Sbjct: 67 RCRFEH 72
Score = 37.0 bits (84), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 17/69 (24%)
Query: 20 CQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGA 79
C+Y+M G CK G +C+Y H + +P C ++ K C FG
Sbjct: 24 CRYFMH-GLCKEGDNCRYSHDLTSS---------------KPAAMMCKFFQKG-NCVFGE 66
Query: 80 TCKFHHPQP 88
C+F H +P
Sbjct: 67 RCRFEHCKP 75
>sp|Q0JP11|C3H3_ORYSJ Zinc finger CCCH domain-containing protein 3 OS=Oryza sativa
subsp. japonica GN=Os01g0252200 PE=2 SV=2
Length = 167
Score = 40.4 bits (93), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 19/21 (90%)
Query: 19 VCQYYMRTGTCKYGASCKYHH 39
VCQ+++RTGTCK+G SC+Y H
Sbjct: 68 VCQHFVRTGTCKFGDSCRYFH 88
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 17/20 (85%)
Query: 234 CQYYMKTGDCKFGSSCRFHH 253
CQ++++TG CKFG SCR+ H
Sbjct: 69 CQHFVRTGTCKFGDSCRYFH 88
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Query: 271 LPLRPGAAP---CTHYVQRGVCKFGPACKFDH 299
L +PGAA C H+V+ G CKFG +C++ H
Sbjct: 57 LLHQPGAAAIGVCQHFVRTGTCKFGDSCRYFH 88
>sp|Q9LTS7|C3H65_ARATH Zinc finger CCCH domain-containing protein 65 OS=Arabidopsis
thaliana GN=EMB1789 PE=2 SV=1
Length = 675
Score = 38.5 bits (88), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 54/145 (37%), Gaps = 47/145 (32%)
Query: 234 CQYYMKTGDCKFGSSCRFHHPRELIVPK--------------MDVTLSPFGLPLRPGAAP 279
C++Y+K G C G C+F H +P+ M PF L P
Sbjct: 356 CRHYLK-GRCHEGDKCKFSHD---TIPETKCSPCCYFATQSCMKGDDCPFDHDL--SKYP 409
Query: 280 CTHYVQRGVCKFGPACKFDH--------------------PMGMLSYSPSAS-------S 312
C +++ +G C G +C F H + S+SP + +
Sbjct: 410 CNNFITKGFCYRGDSCLFSHKGTPQSASDTPSANVTVSSTKITAASFSPQKTKKQSVRDA 469
Query: 313 LADMPVAPYPVGSSIGTLAPSSASS 337
+A +P V SS+ L PSS S+
Sbjct: 470 IAKLPAIQARVSSSVAFLKPSSHSN 494
>sp|P53781|TTP_BOVIN Tristetraprolin OS=Bos taurus GN=ZFP36 PE=2 SV=1
Length = 324
Score = 38.5 bits (88), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 14 RVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTR 73
R +C+ + +G C+YGA C++ H G G + S +P E +Y++ R
Sbjct: 101 RYKTELCRTFSESGRCRYGAKCQFAH---GLGELRQASR----HPKYKTELCHKFYLQGR 153
Query: 74 QCKFGATCKFHHPQPAGVPAP 94
C +G+ C F H + AP
Sbjct: 154 -CPYGSRCHFIHNPSEDLAAP 173
>sp|P22893|TTP_MOUSE Tristetraprolin OS=Mus musculus GN=Zfp36 PE=1 SV=1
Length = 319
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 14 RVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTR 73
R +C+ Y +G C+YGA C++ H G G + + +P E +Y++ R
Sbjct: 95 RYKTELCRTYSESGRCRYGAKCQFAH---GLGELRQANR----HPKYKTELCHKFYLQGR 147
Query: 74 QCKFGATCKFHH 85
C +G+ C F H
Sbjct: 148 -CPYGSRCHFIH 158
Score = 32.0 bits (71), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 18/73 (24%)
Query: 232 QECQYYMKTGDCKFGSSCRFHHPRELIV-----PKMDVTLSPFGLPLRPGAAPCTHYVQR 286
+ C+ Y ++G C++G+ C+F H + PK L C + +
Sbjct: 99 ELCRTYSESGRCRYGAKCQFAHGLGELRQANRHPKYKTEL-------------CHKFYLQ 145
Query: 287 GVCKFGPACKFDH 299
G C +G C F H
Sbjct: 146 GRCPYGSRCHFIH 158
>sp|Q7SGR2|YTH1_NEUCR mRNA 3'-end-processing protein yth-1 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=yth-1 PE=3 SV=1
Length = 317
Score = 37.7 bits (86), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 18/91 (19%)
Query: 6 AGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKE 65
GG F G VC++++R G CK G SC++ H Y LR E
Sbjct: 85 GGGNTFSGGFGSLVCKHWLR-GLCKKGESCEFLHE----------------YNLRK-MPE 126
Query: 66 CSYYMKTRQCKFGATCKFHHPQPAGVPAPTP 96
C+++++ C G C + H P P P
Sbjct: 127 CNFFVRNGYCSNGDECLYLHIDPLSRLPPCP 157
>sp|P47973|TTP_RAT Tristetraprolin OS=Rattus norvegicus GN=Zfp36 PE=2 SV=1
Length = 320
Score = 37.7 bits (86), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 14 RVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTR 73
R +C+ Y +G C+YGA C++ H G G + + +P E +Y++ R
Sbjct: 96 RYKTELCRTYSESGRCRYGAKCQFAH---GPGELRQANR----HPKYKTELCHKFYLQGR 148
Query: 74 QCKFGATCKFHH 85
C +G+ C F H
Sbjct: 149 -CPYGSRCHFIH 159
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 18/73 (24%)
Query: 232 QECQYYMKTGDCKFGSSCRFHH-PRELIV----PKMDVTLSPFGLPLRPGAAPCTHYVQR 286
+ C+ Y ++G C++G+ C+F H P EL PK L C + +
Sbjct: 100 ELCRTYSESGRCRYGAKCQFAHGPGELRQANRHPKYKTEL-------------CHKFYLQ 146
Query: 287 GVCKFGPACKFDH 299
G C +G C F H
Sbjct: 147 GRCPYGSRCHFIH 159
>sp|P26651|TTP_HUMAN Tristetraprolin OS=Homo sapiens GN=ZFP36 PE=1 SV=1
Length = 326
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 14 RVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTR 73
R +C+ + +G C+YGA C++ H G G + + +P E +Y++ R
Sbjct: 103 RYKTELCRTFSESGRCRYGAKCQFAH---GLGELRQANR----HPKYKTELCHKFYLQGR 155
Query: 74 QCKFGATCKFHH 85
C +G+ C F H
Sbjct: 156 -CPYGSRCHFIH 166
>sp|O74463|YQC1_SCHPO Uncharacterized protein C1739.01 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC1739.01 PE=1 SV=2
Length = 547
Score = 37.4 bits (85), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 20/86 (23%)
Query: 20 CQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGA 79
C+++ R GTC G +C + H + RP C Y++K CKFG
Sbjct: 47 CKFF-RNGTCTAGENCPFSHSLETE---------------RP---ICKYFLKG-NCKFGP 86
Query: 80 TCKFHHPQPAGVPAPTPSPAPQVAAV 105
C H P P + +A++
Sbjct: 87 KCALSHALPGNTNLPNGTSTNTMASM 112
Score = 37.0 bits (84), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 20/68 (29%)
Query: 234 CQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGP 293
C+++ + G C G +C F H E P Y +G CKFGP
Sbjct: 47 CKFF-RNGTCTAGENCPFSHSLET-------------------ERPICKYFLKGNCKFGP 86
Query: 294 ACKFDHPM 301
C H +
Sbjct: 87 KCALSHAL 94
>sp|Q6S9E0|TTP_SHEEP Tristetraprolin OS=Ovis aries GN=ZFP36 PE=2 SV=1
Length = 325
Score = 37.0 bits (84), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 14 RVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTR 73
R +C+ + +G C+YGA C++ H G G + S +P E +Y++ R
Sbjct: 101 RYKTELCRTFSESGRCRYGAKCQFAH---GLGELRQPSR----HPKYKTELCHKFYLQGR 153
Query: 74 QCKFGATCKFHHPQPAGVPAP 94
C +G+ C F H + AP
Sbjct: 154 -CPYGSRCHFIHNPSEDLAAP 173
>sp|Q13434|MKRN4_HUMAN Putative E3 ubiquitin-protein ligase makorin-4 OS=Homo sapiens
GN=MKRN4P PE=5 SV=1
Length = 485
Score = 36.2 bits (82), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 17/77 (22%)
Query: 237 YMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACK 296
Y K G CK G +CR+ H D++ G+ + Y QRG C +G C+
Sbjct: 98 YFKYGICKEGDNCRYSH---------DLSDRLCGVVCK--------YFQRGCCVYGDRCR 140
Query: 297 FDHPMGMLSYSPSASSL 313
+H + +A+ L
Sbjct: 141 CEHSKPLKQEEATATEL 157
>sp|Q9H000|MKRN2_HUMAN Probable E3 ubiquitin-protein ligase makorin-2 OS=Homo sapiens
GN=MKRN2 PE=2 SV=2
Length = 416
Score = 35.4 bits (80), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 93/263 (35%), Gaps = 71/263 (26%)
Query: 17 QPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCK 76
Q C+Y+M G C+ G+ C + H + +P C YY K C
Sbjct: 5 QITCRYFMH-GVCREGSQCLFSHDLANS---------------KPSTI-CKYYQKG-YCA 46
Query: 77 FGATCKFHHPQPAGVPAPTPSPAPQVAAVPTPVPAPALYPPLQSPSVPSAQQYGVVVARP 136
+G C++ H +P+ V + VP+PA + SP PS +V
Sbjct: 47 YGTRCRYDHTRPSAAAGGA------VGTMAHSVPSPAFH----SPHPPSEVTASIVKT-- 94
Query: 137 PLLHGSYVQGPYGPVLVSPSMFSLQGWSPYATSLNPISSPGTGTQSSVGSSSIYGITQLS 196
S+ G + +L G + T + +S+PG S
Sbjct: 95 ----NSHEPGKREKRTLVLRDRNLSGMAERKTQPSMVSNPG------------------S 132
Query: 197 ASAP---------AYTGTYQSLPSSVGPSSSSQKEHPFPERPGQQECQYYMKTGDCKFGS 247
S P +Y +S V SSS E QQ C Y G+C+FG
Sbjct: 133 CSDPQPSPEMKPHSYLDAIRSGLDDVEASSSYSNE--------QQLCPY-AAAGECRFGD 183
Query: 248 SCRFHHPRELIVPKMDVTLSPFG 270
+C + H + ++ V L PF
Sbjct: 184 ACVYLHGEVCEICRLQV-LHPFD 205
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 35/103 (33%)
Query: 231 QQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCK 290
Q C+Y+M G C+ GS C F H D+ S +P C +Y Q+G C
Sbjct: 5 QITCRYFMH-GVCREGSQCLFSH---------DLANS------KPSTI-CKYY-QKGYCA 46
Query: 291 FGPACKFDHPMGMLSYSPSASSLADMPVAPYPVGSSIGTLAPS 333
+G C++DH PSA++ G ++GT+A S
Sbjct: 47 YGTRCRYDHT------RPSAAA-----------GGAVGTMAHS 72
>sp|Q69XQ3|C3H44_ORYSJ Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa
subsp. japonica GN=Os06g0618100 PE=2 SV=1
Length = 295
Score = 35.4 bits (80), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 91/268 (33%), Gaps = 56/268 (20%)
Query: 20 CQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYG----------YPLRPG------- 62
C + T C +G+SC + H G G + + +G PL PG
Sbjct: 38 CTKFFSTSGCPFGSSCHFLHNFPG-GYQAAAKMTSHGGTAVAAPPGRMPLGPGAPNGPPT 96
Query: 63 ----EKECSYYMKTRQCKFGATCKFHHPQ-----PAGVPAPTPSPAPQVAAVPTPVPAPA 113
+ C+ Y CK+G+ C F H + P + P P + P+P P
Sbjct: 97 SSVKTRMCNKYNTAEGCKWGSKCHFAHGERELGKPMLLDNSMPHPMGSMPFEAPPMPGPD 156
Query: 114 LYPPLQSPSVPSAQQYGVVVARPPLLHGSYVQGPYGPVLVSPSMFSLQGWSPYAT----- 168
+ PP +G + S G G + S + A
Sbjct: 157 IVPP---------STFGASATAKISVDASLAGGIIGKGGTNTKHISRMTGAKLAIRDNES 207
Query: 169 --SLNPISSPGTGTQSSVGSSSIYG-ITQLSASAPAYTGTYQSLPSSVGPSSSSQKEHPF 225
+L I GT Q S+ + I ++S +AP + + GP S+ +
Sbjct: 208 NPNLKNIELEGTFDQIKHASAMVTELIVRISGNAPPAKNPGRG-SHAGGPGSNFK----- 261
Query: 226 PERPGQQECQYYMKTGDCKFGSSCRFHH 253
+ C+ + K G C FG C F H
Sbjct: 262 -----TKLCENFNK-GSCTFGDRCHFAH 283
Score = 32.3 bits (72), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 60/162 (37%), Gaps = 33/162 (20%)
Query: 234 CQYYMKTGDCKFGSSCRFHHP---RELIVPKMD------VTLSPFGLPLRPGA------- 277
C + T C FGSSC F H KM V P +PL PGA
Sbjct: 38 CTKFFSTSGCPFGSSCHFLHNFPGGYQAAAKMTSHGGTAVAAPPGRMPLGPGAPNGPPTS 97
Query: 278 ----APCTHYVQRGVCKFGPACKFDHPMGMLSYSPSASSLADMPVAPYPVGSSIGTLAPS 333
C Y CK+G C F H L L D + P+P+G S+ AP
Sbjct: 98 SVKTRMCNKYNTAEGCKWGSKCHFAHGERELGK----PMLLDNSM-PHPMG-SMPFEAPP 151
Query: 334 SASSDLRPELISGSSKDSVSTRMSSSVSISSGSVGSILSKSG 375
D+ P G+S ++ +S+ + G I+ K G
Sbjct: 152 MPGPDIVPPSTFGAS-------ATAKISVDASLAGGIIGKGG 186
>sp|P47974|TISD_HUMAN Zinc finger protein 36, C3H1 type-like 2 OS=Homo sapiens GN=ZFP36L2
PE=1 SV=3
Length = 494
Score = 35.4 bits (80), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 18/90 (20%)
Query: 232 QECQYYMKTGDCKFGSSCR----FHHPRELIV-PKMDVTLSPFGLPLRPGAAPCTHYVQR 286
+ C+ + ++G CK+G C+ FH R L PK L C +
Sbjct: 157 ELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHPKYKTEL-------------CRTFHTI 203
Query: 287 GVCKFGPACKFDHPMGMLSYSPSASSLADM 316
G C +GP C F H +PS + D+
Sbjct: 204 GFCPYGPRCHFIHNADERRPAPSGGASGDL 233
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 14 RVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTR 73
R +C+ + +GTCKYG C++ H S++ +P E C +
Sbjct: 153 RYKTELCRPFEESGTCKYGEKCQFAHGFHELRSLTR-------HPKYKTEL-CRTFHTIG 204
Query: 74 QCKFGATCKFHHPQPAGVPAPTPSPAPQVAAVPT 107
C +G C F H PAP+ + + A T
Sbjct: 205 FCPYGPRCHFIHNADERRPAPSGGASGDLRAFGT 238
>sp|Q9DFG8|MKRN2_DANRE Probable E3 ubiquitin-protein ligase makorin-2 OS=Danio rerio
GN=mkrn2 PE=2 SV=2
Length = 414
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 18/69 (26%)
Query: 231 QQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCK 290
Q C+Y++ G C+ GS C F H D+T S +P C +Y QRG C
Sbjct: 5 QVTCRYFLH-GVCREGSRCLFSH---------DLTTS------KPSTI-CKYY-QRGACA 46
Query: 291 FGPACKFDH 299
+G C++DH
Sbjct: 47 YGDRCRYDH 55
>sp|B0F0H3|MKRN2_XENLA Probable E3 ubiquitin-protein ligase makorin-2 OS=Xenopus laevis
GN=mkrn2 PE=2 SV=2
Length = 409
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 30/108 (27%)
Query: 17 QPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCK 76
Q C+Y++ G C+ G+ C + H S V C ++++ QC
Sbjct: 5 QVTCRYFLH-GVCREGSRCLFSHD-LATSKPSTV---------------CRFFLRG-QCA 46
Query: 77 FGATCKFHHPQPAG----VP----APTPSPAP----QVAAVPTPVPAP 112
+G C++ H +P +P +P SP P Q AAVP +PAP
Sbjct: 47 YGTRCRYDHVKPCNGTVFIPPQEMSPVLSPPPLFPAQEAAVPPTIPAP 94
>sp|P47977|CTH2_YEAST mRNA decay factor CTH2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=TIS11 PE=1 SV=1
Length = 285
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 10/90 (11%)
Query: 211 SSVGPSSSSQKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHPR-ELIVPKMDVTLSPF 269
SS P SQ + + + C+ + G C +GS C+F H EL V K + F
Sbjct: 152 SSAQPKVKSQVQETPKQLYKTELCESFTLKGSCPYGSKCQFAHGLGELKVKK---SCKNF 208
Query: 270 GLPLRPGAAPCTHYVQRGVCKFGPACKFDH 299
PC ++ + G C +G C F H
Sbjct: 209 ------RTKPCVNWEKLGYCPYGRRCCFKH 232
>sp|P0CS64|YTH1_CRYNJ mRNA 3'-end-processing protein YTH1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=YTH1 PE=3 SV=1
Length = 332
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 31/80 (38%), Gaps = 4/80 (5%)
Query: 18 PVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYY----GYPLRPGEKECSYYMKTR 73
PVC ++++ G C+ G C Y HPR + + + P + +
Sbjct: 125 PVCIWFVKQGKCELGGECLYFHPRDRRVECPDYNRGFCVLGPNCPRKHIRRRLCDAYAAG 184
Query: 74 QCKFGATCKFHHPQPAGVPA 93
C G CK HP P PA
Sbjct: 185 FCPDGKDCKLAHPSPNRPPA 204
Score = 33.9 bits (76), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 10/74 (13%)
Query: 234 CQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQR------- 286
C +++K G C+ G C + HPR+ V D G + P H +R
Sbjct: 127 CIWFVKQGKCELGGECLYFHPRDRRVECPDYNR---GFCVLGPNCPRKHIRRRLCDAYAA 183
Query: 287 GVCKFGPACKFDHP 300
G C G CK HP
Sbjct: 184 GFCPDGKDCKLAHP 197
>sp|P0CS65|YTH1_CRYNB mRNA 3'-end-processing protein YTH1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=YTH1 PE=3 SV=1
Length = 332
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 31/80 (38%), Gaps = 4/80 (5%)
Query: 18 PVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYY----GYPLRPGEKECSYYMKTR 73
PVC ++++ G C+ G C Y HPR + + + P + +
Sbjct: 125 PVCIWFVKQGKCELGGECLYFHPRDRRVECPDYNRGFCVLGPNCPRKHIRRRLCDAYAAG 184
Query: 74 QCKFGATCKFHHPQPAGVPA 93
C G CK HP P PA
Sbjct: 185 FCPDGKDCKLAHPSPNRPPA 204
Score = 33.9 bits (76), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 10/74 (13%)
Query: 234 CQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQR------- 286
C +++K G C+ G C + HPR+ V D G + P H +R
Sbjct: 127 CIWFVKQGKCELGGECLYFHPRDRRVECPDYNR---GFCVLGPNCPRKHIRRRLCDAYAA 183
Query: 287 GVCKFGPACKFDHP 300
G C G CK HP
Sbjct: 184 GFCPDGKDCKLAHP 197
>sp|Q9ERV1|MKRN2_MOUSE Probable E3 ubiquitin-protein ligase makorin-2 OS=Mus musculus
GN=Mkrn2 PE=2 SV=2
Length = 416
Score = 32.7 bits (73), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 18/69 (26%)
Query: 231 QQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCK 290
Q C+Y+M G C+ GS C F H D+ S +P C +Y Q+G C
Sbjct: 5 QVTCRYFMH-GVCREGSQCLFSH---------DLANS------KPSTI-CKYY-QKGYCA 46
Query: 291 FGPACKFDH 299
+G C++DH
Sbjct: 47 YGARCRYDH 55
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 166,231,864
Number of Sequences: 539616
Number of extensions: 8003355
Number of successful extensions: 55114
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 1099
Number of HSP's that attempted gapping in prelim test: 37401
Number of HSP's gapped (non-prelim): 12635
length of query: 403
length of database: 191,569,459
effective HSP length: 120
effective length of query: 283
effective length of database: 126,815,539
effective search space: 35888797537
effective search space used: 35888797537
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)