BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015672
(403 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/360 (61%), Positives = 261/360 (72%), Gaps = 26/360 (7%)
Query: 57 DGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL 116
D G++ V+ T G+ + Q+VSY V+G GSFGVV+QAK ++GE+VAIKKVL
Sbjct: 25 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 82
Query: 117 QDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXX-XTVNRIARNYSR 175
QDKR+KNRELQIM+ LDH NIV L++ F+S+ +K TV R+AR+YSR
Sbjct: 83 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 142
Query: 176 IHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLL------------------- 216
Q +P+IYVKLY YQ+ R+LAYIH+ GICHRDIKPQNLL
Sbjct: 143 AKQTLPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 201
Query: 217 VKGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV 276
V+GEPNVSYICSRYYRAPELIFGAT+YT++ID+WS GCV+AELLLGQP+FPG+SGVDQLV
Sbjct: 202 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 261
Query: 277 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNL 336
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L R +Y+P
Sbjct: 262 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 321
Query: 337 RCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPEHARKQ 395
R T LEAC H FFDELRDPN +LPNGR P LFNF ELS PP TI LIP HAR Q
Sbjct: 322 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPPHARIQ 379
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 428 bits (1101), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/360 (61%), Positives = 261/360 (72%), Gaps = 26/360 (7%)
Query: 57 DGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL 116
D G++ V+ T G+ + Q+VSY V+G GSFGVV+QAK ++GE+VAIKKVL
Sbjct: 31 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 88
Query: 117 QDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXX-XTVNRIARNYSR 175
QDKR+KNRELQIM+ LDH NIV L++ F+S+ +K TV R+AR+YSR
Sbjct: 89 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 148
Query: 176 IHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLL------------------- 216
Q +P+IYVKLY YQ+ R+LAYIH+ GICHRDIKPQNLL
Sbjct: 149 AKQTLPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
Query: 217 VKGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV 276
V+GEPNVSYICSRYYRAPELIFGAT+YT++ID+WS GCV+AELLLGQP+FPG+SGVDQLV
Sbjct: 208 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 267
Query: 277 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNL 336
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L R +Y+P
Sbjct: 268 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 327
Query: 337 RCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPEHARKQ 395
R T LEAC H FFDELRDPN +LPNGR P LFNF ELS PP TI LIP HAR Q
Sbjct: 328 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPPHARIQ 385
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 428 bits (1101), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/360 (61%), Positives = 261/360 (72%), Gaps = 26/360 (7%)
Query: 57 DGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL 116
D G++ V+ T G+ + Q+VSY V+G GSFGVV+QAK ++GE+VAIKKVL
Sbjct: 35 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 92
Query: 117 QDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXX-XTVNRIARNYSR 175
QDKR+KNRELQIM+ LDH NIV L++ F+S+ +K TV R+AR+YSR
Sbjct: 93 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 152
Query: 176 IHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLL------------------- 216
Q +P+IYVKLY YQ+ R+LAYIH+ GICHRDIKPQNLL
Sbjct: 153 AKQTLPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 211
Query: 217 VKGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV 276
V+GEPNVSYICSRYYRAPELIFGAT+YT++ID+WS GCV+AELLLGQP+FPG+SGVDQLV
Sbjct: 212 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 271
Query: 277 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNL 336
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L R +Y+P
Sbjct: 272 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 331
Query: 337 RCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPEHARKQ 395
R T LEAC H FFDELRDPN +LPNGR P LFNF ELS PP TI LIP HAR Q
Sbjct: 332 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPPHARIQ 389
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 428 bits (1100), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/360 (61%), Positives = 261/360 (72%), Gaps = 26/360 (7%)
Query: 57 DGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL 116
D G++ V+ T G+ + Q+VSY V+G GSFGVV+QAK ++GE+VAIKKVL
Sbjct: 33 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 90
Query: 117 QDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXX-XTVNRIARNYSR 175
QDKR+KNRELQIM+ LDH NIV L++ F+S+ +K TV R+AR+YSR
Sbjct: 91 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 150
Query: 176 IHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLL------------------- 216
Q +P+IYVKLY YQ+ R+LAYIH+ GICHRDIKPQNLL
Sbjct: 151 AKQTLPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 209
Query: 217 VKGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV 276
V+GEPNVSYICSRYYRAPELIFGAT+YT++ID+WS GCV+AELLLGQP+FPG+SGVDQLV
Sbjct: 210 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 269
Query: 277 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNL 336
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L R +Y+P
Sbjct: 270 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 329
Query: 337 RCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPEHARKQ 395
R T LEAC H FFDELRDPN +LPNGR P LFNF ELS PP TI LIP HAR Q
Sbjct: 330 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPPHARIQ 387
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 428 bits (1100), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/360 (61%), Positives = 261/360 (72%), Gaps = 26/360 (7%)
Query: 57 DGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL 116
D G++ V+ T G+ + Q+VSY V+G GSFGVV+QAK ++GE+VAIKKVL
Sbjct: 76 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 133
Query: 117 QDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXX-XTVNRIARNYSR 175
QDKR+KNRELQIM+ LDH NIV L++ F+S+ +K TV R+AR+YSR
Sbjct: 134 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 193
Query: 176 IHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLL------------------- 216
Q +P+IYVKLY YQ+ R+LAYIH+ GICHRDIKPQNLL
Sbjct: 194 AKQTLPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 252
Query: 217 VKGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV 276
V+GEPNVSYICSRYYRAPELIFGAT+YT++ID+WS GCV+AELLLGQP+FPG+SGVDQLV
Sbjct: 253 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 312
Query: 277 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNL 336
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L R +Y+P
Sbjct: 313 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 372
Query: 337 RCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPEHARKQ 395
R T LEAC H FFDELRDPN +LPNGR P LFNF ELS PP TI LIP HAR Q
Sbjct: 373 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPPHARIQ 430
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 427 bits (1099), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/359 (61%), Positives = 260/359 (72%), Gaps = 26/359 (7%)
Query: 60 GAETGHVIRTTIG--GRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ 117
GA + + T + G+ + Q+VSY V+G GSFGVV+QAK ++GE+VAIKKVLQ
Sbjct: 1 GAMSLSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ 60
Query: 118 DKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXX-XTVNRIARNYSRI 176
DKR+KNRELQIM+ LDH NIV L++ F+S+ +K TV R+AR+YSR
Sbjct: 61 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 120
Query: 177 HQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLL-------------------V 217
Q +P+IYVKLY YQ+ R+LAYIH+ GICHRDIKPQNLL V
Sbjct: 121 KQTLPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 179
Query: 218 KGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVE 277
+GEPNVSYICSRYYRAPELIFGAT+YT++ID+WS GCV+AELLLGQP+FPG+SGVDQLVE
Sbjct: 180 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 239
Query: 278 IIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLR 337
IIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L R +Y+P R
Sbjct: 240 IIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 299
Query: 338 CTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPEHARKQ 395
T LEAC H FFDELRDPN +LPNGR P LFNF ELS PP TI LIP HAR Q
Sbjct: 300 LTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPPHARIQ 356
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 427 bits (1098), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/360 (61%), Positives = 261/360 (72%), Gaps = 26/360 (7%)
Query: 57 DGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL 116
D G++ V+ T G+ + Q+VSY V+G GSFGVV+QAK ++GE+VAIKKVL
Sbjct: 10 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 67
Query: 117 QDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXX-XTVNRIARNYSR 175
QDKR+KNRELQIM+ LDH NIV L++ F+S+ +K TV R+AR+YSR
Sbjct: 68 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 127
Query: 176 IHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLL------------------- 216
Q +P+IYVKLY YQ+ R+LAYIH+ GICHRDIKPQNLL
Sbjct: 128 AKQTLPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 186
Query: 217 VKGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV 276
V+GEPNVSYICSRYYRAPELIFGAT+YT++ID+WS GCV+AELLLGQP+FPG+SGVDQLV
Sbjct: 187 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 246
Query: 277 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNL 336
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L R +Y+P
Sbjct: 247 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 306
Query: 337 RCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPEHARKQ 395
R T LEAC H FFDELRDPN +LPNGR P LFNF ELS PP TI LIP HAR Q
Sbjct: 307 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPPHARIQ 364
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 426 bits (1094), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/360 (61%), Positives = 260/360 (72%), Gaps = 26/360 (7%)
Query: 57 DGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL 116
D G++ V+ T G+ + Q+VSY V+G GSFGVV+QAK ++GE+VAIKKVL
Sbjct: 31 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 88
Query: 117 QDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXX-XTVNRIARNYSR 175
QDKR+KNRELQIM+ LDH NIV L++ F+S+ +K TV R+AR+YSR
Sbjct: 89 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 148
Query: 176 IHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLL------------------- 216
Q +P+IYVKLY YQ+ R+LAYIH+ GICHRDIKPQNLL
Sbjct: 149 AKQTLPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
Query: 217 VKGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV 276
V+GEPNVS ICSRYYRAPELIFGAT+YT++ID+WS GCV+AELLLGQP+FPG+SGVDQLV
Sbjct: 208 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 267
Query: 277 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNL 336
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L R +Y+P
Sbjct: 268 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 327
Query: 337 RCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPEHARKQ 395
R T LEAC H FFDELRDPN +LPNGR P LFNF ELS PP TI LIP HAR Q
Sbjct: 328 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPPHARIQ 385
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 425 bits (1092), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/360 (61%), Positives = 260/360 (72%), Gaps = 26/360 (7%)
Query: 57 DGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL 116
D G++ V+ T G+ + Q+VSY V+G GSFGVV+QAK ++GE+VAIKKVL
Sbjct: 9 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 66
Query: 117 QDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXX-XTVNRIARNYSR 175
QDKR+KNRELQIM+ LDH NIV L++ F+S+ +K TV R+AR+YSR
Sbjct: 67 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 126
Query: 176 IHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLL------------------- 216
Q +P+IYVKLY YQ+ R+LAYIH+ GICHRDIKPQNLL
Sbjct: 127 AKQTLPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
Query: 217 VKGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV 276
V+GEPNVS ICSRYYRAPELIFGAT+YT++ID+WS GCV+AELLLGQP+FPG+SGVDQLV
Sbjct: 186 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 245
Query: 277 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNL 336
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L R +Y+P
Sbjct: 246 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 305
Query: 337 RCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPEHARKQ 395
R T LEAC H FFDELRDPN +LPNGR P LFNF ELS PP TI LIP HAR Q
Sbjct: 306 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPPHARIQ 363
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 424 bits (1090), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/360 (61%), Positives = 260/360 (72%), Gaps = 26/360 (7%)
Query: 57 DGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL 116
D G++ V+ T G+ + Q+VSY V+G GSFGVV+QAK ++GE+VAIKKVL
Sbjct: 16 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 73
Query: 117 QDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXX-XTVNRIARNYSR 175
QDKR+KNRELQIM+ LDH NIV L++ F+S+ +K TV R+AR+YSR
Sbjct: 74 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 133
Query: 176 IHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLL------------------- 216
Q +P+IYVKLY YQ+ R+LAYIH+ GICHRDIKPQNLL
Sbjct: 134 AKQTLPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 192
Query: 217 VKGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV 276
V+GEPNVS ICSRYYRAPELIFGAT+YT++ID+WS GCV+AELLLGQP+FPG+SGVDQLV
Sbjct: 193 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 252
Query: 277 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNL 336
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L R +Y+P
Sbjct: 253 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 312
Query: 337 RCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPEHARKQ 395
R T LEAC H FFDELRDPN +LPNGR P LFNF ELS PP TI LIP HAR Q
Sbjct: 313 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPPHARIQ 370
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 424 bits (1090), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/360 (61%), Positives = 260/360 (72%), Gaps = 26/360 (7%)
Query: 57 DGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL 116
D G++ V+ T G+ + Q+VSY V+G GSFGVV+QAK ++GE+VAIKKVL
Sbjct: 9 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 66
Query: 117 QDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXX-XTVNRIARNYSR 175
QDKR+KNRELQIM+ LDH NIV L++ F+S+ +K TV R+AR+YSR
Sbjct: 67 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 126
Query: 176 IHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLL------------------- 216
Q +P+IYVKLY YQ+ R+LAYIH+ GICHRDIKPQNLL
Sbjct: 127 AKQTLPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
Query: 217 VKGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV 276
V+GEPNVS ICSRYYRAPELIFGAT+YT++ID+WS GCV+AELLLGQP+FPG+SGVDQLV
Sbjct: 186 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 245
Query: 277 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNL 336
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L R +Y+P
Sbjct: 246 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 305
Query: 337 RCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPEHARKQ 395
R T LEAC H FFDELRDPN +LPNGR P LFNF ELS PP TI LIP HAR Q
Sbjct: 306 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPPHARIQ 363
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 424 bits (1089), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/360 (61%), Positives = 260/360 (72%), Gaps = 26/360 (7%)
Query: 57 DGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL 116
D G++ V+ T G+ + Q+VSY V+G GSFGVV+QAK ++GE+VAIKKVL
Sbjct: 5 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 62
Query: 117 QDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXX-XTVNRIARNYSR 175
QDKR+KNRELQIM+ LDH NIV L++ F+S+ +K TV R+AR+YSR
Sbjct: 63 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 122
Query: 176 IHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLL------------------- 216
Q +P+IYVKLY YQ+ R+LAYIH+ GICHRDIKPQNLL
Sbjct: 123 AKQTLPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 181
Query: 217 VKGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV 276
V+GEPNVS ICSRYYRAPELIFGAT+YT++ID+WS GCV+AELLLGQP+FPG+SGVDQLV
Sbjct: 182 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 241
Query: 277 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNL 336
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L R +Y+P
Sbjct: 242 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 301
Query: 337 RCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPEHARKQ 395
R T LEAC H FFDELRDPN +LPNGR P LFNF ELS PP TI LIP HAR Q
Sbjct: 302 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPPHARIQ 359
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 424 bits (1089), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/342 (63%), Positives = 253/342 (73%), Gaps = 24/342 (7%)
Query: 73 GRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQML 132
G+ + Q+VSY V+G GSFGVV+QAK ++GE+VAIKKVLQDKR+KNRELQIM+ L
Sbjct: 11 GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL 70
Query: 133 DHPNIVALKHCFFSTTDKXXXXXXXXXXXXX-XTVNRIARNYSRIHQRMPLIYVKLYTYQ 191
DH NIV L++ F+S+ +K TV R+AR+YSR Q +P+IYVKLY YQ
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 192 ICRALAYIHNCIGICHRDIKPQNLL-------------------VKGEPNVSYICSRYYR 232
+ R+LAYIH+ GICHRDIKPQNLL V+GEPNVSYICSRYYR
Sbjct: 131 LFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 189
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APELIFGAT+YT++ID+WS GCV+AELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE+I+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 293 MNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL 352
MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L R +Y+P R T LEAC H FFDEL
Sbjct: 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
Query: 353 RDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPEHAR 393
RDPN +LPNGR P LFNF ELS PP TI LIP HAR
Sbjct: 310 RDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPPHAR 349
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 422 bits (1085), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/357 (61%), Positives = 259/357 (72%), Gaps = 26/357 (7%)
Query: 58 GVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ 117
+G++ V+ T G+ + Q+VSY V+G GSFGVV+QAK ++GE+VAIKKVLQ
Sbjct: 2 AMGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ 59
Query: 118 DKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXX-XTVNRIARNYSRI 176
DKR+KNRELQIM+ LDH NIV L++ F+S+ +K TV R+AR+YSR
Sbjct: 60 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 119
Query: 177 HQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLL-------------------V 217
Q +P+IYVKLY YQ+ R+LAYIH+ GICHRDIKPQNLL V
Sbjct: 120 KQTLPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 178
Query: 218 KGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVE 277
+GEPNVS ICSRYYRAPELIFGAT+YT++ID+WS GCV+AELLLGQP+FPG+SGVDQLVE
Sbjct: 179 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 238
Query: 278 IIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLR 337
IIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L R +Y+P R
Sbjct: 239 IIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 298
Query: 338 CTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPEHAR 393
T LEAC H FFDELRDPN +LPNGR P LFNF ELS PP TI LIP HAR
Sbjct: 299 LTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPPHAR 353
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 422 bits (1084), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/344 (62%), Positives = 253/344 (73%), Gaps = 24/344 (6%)
Query: 73 GRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQML 132
G+ + Q+VSY V+G GSFGVV+QAK ++GE+VAIKKVLQDKR+KNRELQIM+ L
Sbjct: 11 GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL 70
Query: 133 DHPNIVALKHCFFSTTDKXXXXXXXXXXXXX-XTVNRIARNYSRIHQRMPLIYVKLYTYQ 191
DH NIV L++ F+S+ +K TV R+AR+YSR Q +P+IYVKLY YQ
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 192 ICRALAYIHNCIGICHRDIKPQNLL-------------------VKGEPNVSYICSRYYR 232
+ R+LAYIH+ GICHRDIKPQNLL V+GEPNVS ICSRYYR
Sbjct: 131 LFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APELIFGAT+YT++ID+WS GCV+AELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE+I+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 293 MNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL 352
MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L R +Y+P R T LEAC H FFDEL
Sbjct: 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
Query: 353 RDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPEHARKQ 395
RDPN +LPNGR P LFNF ELS PP TI LIP HAR Q
Sbjct: 310 RDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPPHARIQ 351
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 421 bits (1081), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/342 (62%), Positives = 252/342 (73%), Gaps = 24/342 (7%)
Query: 73 GRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQML 132
G+ + Q+VSY V+G GSFGVV+QAK ++GE+VAIKKVLQDKR+KNRELQIM+ L
Sbjct: 11 GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL 70
Query: 133 DHPNIVALKHCFFSTTDKXXXXXXXXXXXXX-XTVNRIARNYSRIHQRMPLIYVKLYTYQ 191
DH NIV L++ F+S+ +K TV R+AR+YSR Q +P+IYVKLY YQ
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 192 ICRALAYIHNCIGICHRDIKPQNLL-------------------VKGEPNVSYICSRYYR 232
+ R+LAYIH+ GICHRDIKPQNLL V+GEPNVS ICSRYYR
Sbjct: 131 LFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APELIFGAT+YT++ID+WS GCV+AELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE+I+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 293 MNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL 352
MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L R +Y+P R T LEAC H FFDEL
Sbjct: 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
Query: 353 RDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPEHAR 393
RDPN +LPNGR P LFNF ELS PP TI LIP HAR
Sbjct: 310 RDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPPHAR 349
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 421 bits (1081), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/342 (62%), Positives = 252/342 (73%), Gaps = 24/342 (7%)
Query: 73 GRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQML 132
G+ + Q+VSY V+G GSFGVV+QAK ++GE+VAIKKVLQDKR+KNRELQIM+ L
Sbjct: 12 GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL 71
Query: 133 DHPNIVALKHCFFSTTDKXXXXXXXXXXXXX-XTVNRIARNYSRIHQRMPLIYVKLYTYQ 191
DH NIV L++ F+S+ +K TV R+AR+YSR Q +P+IYVKLY YQ
Sbjct: 72 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 131
Query: 192 ICRALAYIHNCIGICHRDIKPQNLL-------------------VKGEPNVSYICSRYYR 232
+ R+LAYIH+ GICHRDIKPQNLL V+GEPNVS ICSRYYR
Sbjct: 132 LFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 190
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APELIFGAT+YT++ID+WS GCV+AELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE+I+
Sbjct: 191 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 250
Query: 293 MNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL 352
MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L R +Y+P R T LEAC H FFDEL
Sbjct: 251 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 310
Query: 353 RDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPEHAR 393
RDPN +LPNGR P LFNF ELS PP TI LIP HAR
Sbjct: 311 RDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPPHAR 350
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 421 bits (1081), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/342 (62%), Positives = 252/342 (73%), Gaps = 24/342 (7%)
Query: 73 GRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQML 132
G+ + Q+VSY V+G GSFGVV+QAK ++GE+VAIKKVLQDKR+KNRELQIM+ L
Sbjct: 11 GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL 70
Query: 133 DHPNIVALKHCFFSTTDKXXXXXXXXXXXXX-XTVNRIARNYSRIHQRMPLIYVKLYTYQ 191
DH NIV L++ F+S+ +K TV R+AR+YSR Q +P+IYVKLY YQ
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 192 ICRALAYIHNCIGICHRDIKPQNLL-------------------VKGEPNVSYICSRYYR 232
+ R+LAYIH+ GICHRDIKPQNLL V+GEPNVS ICSRYYR
Sbjct: 131 LFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APELIFGAT+YT++ID+WS GCV+AELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE+I+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 293 MNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL 352
MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L R +Y+P R T LEAC H FFDEL
Sbjct: 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
Query: 353 RDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPEHAR 393
RDPN +LPNGR P LFNF ELS PP TI LIP HAR
Sbjct: 310 RDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPPHAR 349
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/342 (62%), Positives = 251/342 (73%), Gaps = 24/342 (7%)
Query: 73 GRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQML 132
G+ + Q+VSY V+G GSFGVV+QAK ++GE+VAIKKVLQ K +KNRELQIM+ L
Sbjct: 11 GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKL 70
Query: 133 DHPNIVALKHCFFSTTDKXXXXXXXXXXXXX-XTVNRIARNYSRIHQRMPLIYVKLYTYQ 191
DH NIV L++ F+S+ +K TV R+AR+YSR Q +P+IYVKLY YQ
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 192 ICRALAYIHNCIGICHRDIKPQNLL-------------------VKGEPNVSYICSRYYR 232
+ R+LAYIH+ GICHRDIKPQNLL V+GEPNVSYICSRYYR
Sbjct: 131 LFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 189
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APELIFGAT+YT++ID+WS GCV+AELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE+I+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 293 MNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL 352
MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L R +Y+P R T LEAC H FFDEL
Sbjct: 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
Query: 353 RDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPEHAR 393
RDPN +LPNGR P LFNF ELS PP TI LIP HAR
Sbjct: 310 RDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPPHAR 349
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 417 bits (1073), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/344 (62%), Positives = 251/344 (72%), Gaps = 24/344 (6%)
Query: 73 GRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQML 132
G+ + Q+VSY V+G GSFGVV+QAK ++GE+VAIKKVLQ K +KNRELQIM+ L
Sbjct: 11 GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKL 70
Query: 133 DHPNIVALKHCFFSTTDKXXXXXXXXXXXXX-XTVNRIARNYSRIHQRMPLIYVKLYTYQ 191
DH NIV L++ F+S+ +K TV R+AR+YSR Q +P+IYVKLY YQ
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 192 ICRALAYIHNCIGICHRDIKPQNLL-------------------VKGEPNVSYICSRYYR 232
+ R+LAYIH+ GICHRDIKPQNLL V+GEPNVSYICSRYYR
Sbjct: 131 LFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 189
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APELIFGAT+YT++ID+WS GCV+AELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE+I+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 293 MNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL 352
MNPNYTEF FPQIK HPW KVF+ R PPEA+ L R +Y+P R T LEAC H FFDEL
Sbjct: 250 MNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
Query: 353 RDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPEHARKQ 395
RDPN +LPNGR P LFNF ELS PP TI LIP HAR Q
Sbjct: 310 RDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPPHARIQ 351
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 414 bits (1063), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/342 (61%), Positives = 249/342 (72%), Gaps = 24/342 (7%)
Query: 73 GRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQML 132
G+ + Q+VSY V+G GSFGVV+QAK ++GE+VAIKKVLQ K +KNRELQIM+ L
Sbjct: 11 GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKL 70
Query: 133 DHPNIVALKHCFFSTTDKXXXXXXXXXXXXX-XTVNRIARNYSRIHQRMPLIYVKLYTYQ 191
DH NIV L++ F+S+ +K TV R+AR+YSR Q +P+IYVKLY YQ
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 192 ICRALAYIHNCIGICHRDIKPQNLL-------------------VKGEPNVSYICSRYYR 232
+ R+LAYIH+ GICHRDIKPQNLL V+GEPNVS ICSRYYR
Sbjct: 131 LFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APELIFGAT+YT++ID+WS GCV+AELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE+I+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 293 MNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL 352
MNPNYTEF FPQIK HPW KVF+ R PPEA+ L R +Y+P R T LEAC H FFDEL
Sbjct: 250 MNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
Query: 353 RDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPEHAR 393
RDPN +LPNGR P LFNF ELS PP TI LIP HAR
Sbjct: 310 RDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPPHAR 349
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 408 bits (1049), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/352 (58%), Positives = 253/352 (71%), Gaps = 23/352 (6%)
Query: 66 VIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRE 125
VI+ +++++Y V+G GSFGVVFQAK E+ E VAIKKVLQDKR+KNRE
Sbjct: 24 VIKVLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNRE 82
Query: 126 LQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXX-XTVNRIARNYSRIHQRMPLIY 184
LQIM+++ HPN+V LK F+S DK TV R +R+Y+++ Q MP++
Sbjct: 83 LQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLL 142
Query: 185 VKLYTYQICRALAYIHNCIGICHRDIKPQNL-------------------LVKGEPNVSY 225
+KLY YQ+ R+LAYIH+ IGICHRDIKPQNL L+ GEPNVS
Sbjct: 143 IKLYMYQLLRSLAYIHS-IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSX 201
Query: 226 ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTP 285
ICSRYYRAPELIFGAT YTT IDIWSTGCVMAEL+ GQPLFPGESG+DQLVEIIKVLGTP
Sbjct: 202 ICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTP 261
Query: 286 TREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACV 345
+RE+IK MNPNY E KFPQI+PHP+ KVF+ R PP+A+DL+ R +Y+P+ R TA+EA
Sbjct: 262 SREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321
Query: 346 HPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEHARKQNL 397
HPFFDELR R+PNGR LPPLFN+ ELS + P+ I+RL+P+HA + L
Sbjct: 322 HPFFDELRTGEARMPNGRELPPLFNWTKEELS-VRPDLISRLVPQHAEAELL 372
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 281 bits (718), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 150/369 (40%), Positives = 215/369 (58%), Gaps = 62/369 (16%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHC 143
Y +GTGSFG+V + E+G+ A+KKVLQD RYKNREL IM++LDH NI+ L
Sbjct: 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDY 68
Query: 144 FFSTTDK---------------------------------XXXXXXXXXXXXXXTVNRIA 170
F++T D+ T++++
Sbjct: 69 FYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVL 128
Query: 171 RNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKG----------- 219
+++ R + +P+ + +Y YQ+ RA+ +IH+ +GICHRDIKPQNLLV
Sbjct: 129 KSFIRSGRSIPMNLISIYIYQLFRAVGFIHS-LGICHRDIKPQNLLVNSKDNTLKLCDFG 187
Query: 220 --------EPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESG 271
EP+V+ ICSR+YRAPEL+ GATEYT +ID+WS GCV EL+LG+PLF GE+
Sbjct: 188 SAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETS 247
Query: 272 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 331
+DQLV II+++GTPT+E++ MNP+YTE +FP +K W K+ + P A+DL+ + +
Sbjct: 248 IDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILR 307
Query: 332 YSPNLRCTALEACVHPFFDELRDP-------NTRLPNG--RPLPPLFNFKPPELSGIPPE 382
Y P+LR EA HPFFD LR+ N+ P+G + +P LFNF P ELS IP
Sbjct: 308 YEPDLRINPYEAMAHPFFDHLRNSYESEVKNNSNFPHGVNQNIPQLFNFSPYELSIIPGN 367
Query: 383 TINRLIPEH 391
+NR++P++
Sbjct: 368 VLNRILPKN 376
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 258 bits (660), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 195/339 (57%), Gaps = 29/339 (8%)
Query: 79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQ---MLDHP 135
K+ + E + G G+FG V K + TG VAIKKV+QD R++NRELQIMQ +L HP
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHP 79
Query: 136 NIVALKHCFFS--TTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQIC 193
NIV L+ F++ D+ T++R RNY R P I +K++ +Q+
Sbjct: 80 NIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLI 139
Query: 194 RALAYIH-NCIGICHRDIKPQNLLVK-------------------GEPNVSYICSRYYRA 233
R++ +H + +CHRDIKP N+LV EPNV+YICSRYYRA
Sbjct: 140 RSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRA 199
Query: 234 PELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 293
PELIFG YTTA+DIWS GC+ AE++LG+P+F G++ QL EI++VLG P+RE ++ +
Sbjct: 200 PELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKL 259
Query: 294 NPNYTEFKFPQIKPHPWHKVFQK---RLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFD 350
NP++T+ K PW VF + EA DL+ QY P R EA HP+FD
Sbjct: 260 NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFD 319
Query: 351 ELRDPNTRLPNGRPLPP-LFNFKPPELSGIPPETINRLI 388
EL DP T+LPN + LP LF F P E+ + +L+
Sbjct: 320 ELHDPATKLPNNKDLPEDLFRFLPNEIEVMSEAQKAKLV 358
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 157/318 (49%), Gaps = 69/318 (21%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 75 I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 115
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + LA+ H+ + HRD+KPQNLL+ G P +Y + + +YR
Sbjct: 116 LLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 174
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 175 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 230
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 231 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 288
Query: 347 PFFDELRDPNTRLPNGRP 364
PFF ++ P L RP
Sbjct: 289 PFFQDVTKPVPHLRLERP 306
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 154 bits (389), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 69/309 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 70 I-------------------HTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQ 110
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + LA+ H+ + HRD+KPQNLL+ G P +Y + + +YR
Sbjct: 111 LLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 169
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 225
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 226 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283
Query: 347 PFFDELRDP 355
PFF ++ P
Sbjct: 284 PFFQDVTKP 292
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 154 bits (389), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 69/309 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 71 I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + LA+ H+ + HRD+KPQNLL+ G P +Y + + +YR
Sbjct: 112 LLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 170
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 171 APEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 226
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 227 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284
Query: 347 PFFDELRDP 355
PFF ++ P
Sbjct: 285 PFFQDVTKP 293
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 69/309 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 78 I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 118
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + LA+ H+ + HRD+KPQNLL+ G P +Y + + +YR
Sbjct: 119 LLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 177
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 178 APEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 233
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 234 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 291
Query: 347 PFFDELRDP 355
PFF ++ P
Sbjct: 292 PFFQDVTKP 300
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 69/309 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 73 I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 113
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + LA+ H+ + HRD+KPQNLL+ G P +Y + + +YR
Sbjct: 114 LLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 172
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 228
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 229 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 286
Query: 347 PFFDELRDP 355
PFF ++ P
Sbjct: 287 PFFQDVTKP 295
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 69/309 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 74 I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 114
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + LA+ H+ + HRD+KPQNLL+ G P +Y + + +YR
Sbjct: 115 LLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 173
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 229
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 230 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 287
Query: 347 PFFDELRDP 355
PFF ++ P
Sbjct: 288 PFFQDVTKP 296
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 69/309 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 71 I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + LA+ H+ + HRD+KPQNLL+ G P +Y + + +YR
Sbjct: 112 LLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 170
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 226
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 227 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284
Query: 347 PFFDELRDP 355
PFF ++ P
Sbjct: 285 PFFQDVTKP 293
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 69/309 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 74 I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 114
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + LA+ H+ + HRD+KPQNLL+ G P +Y + + +YR
Sbjct: 115 LLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 173
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 229
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 230 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 287
Query: 347 PFFDELRDP 355
PFF ++ P
Sbjct: 288 PFFQDVTKP 296
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 69/309 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 73 I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 113
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + LA+ H+ + HRD+KPQNLL+ G P +Y + + +YR
Sbjct: 114 LLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 172
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 228
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 229 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 286
Query: 347 PFFDELRDP 355
PFF ++ P
Sbjct: 287 PFFQDVTKP 295
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 69/309 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 70 I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + LA+ H+ + HRD+KPQNLL+ G P +Y + + +YR
Sbjct: 111 LLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 169
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 225
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 226 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283
Query: 347 PFFDELRDP 355
PFF ++ P
Sbjct: 284 PFFQDVTKP 292
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 69/309 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 71 I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + LA+ H+ + HRD+KPQNLL+ G P +Y + + +YR
Sbjct: 112 LLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 170
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 226
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 227 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284
Query: 347 PFFDELRDP 355
PFF ++ P
Sbjct: 285 PFFQDVTKP 293
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 69/309 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 70 I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + LA+ H+ + HRD+KPQNLL+ G P +Y + + +YR
Sbjct: 111 LLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 169
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 225
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 226 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283
Query: 347 PFFDELRDP 355
PFF ++ P
Sbjct: 284 PFFQDVTKP 292
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 69/309 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 78 I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 118
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + LA+ H+ + HRD+KPQNLL+ G P +Y + + +YR
Sbjct: 119 LLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 177
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 178 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 233
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 234 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 291
Query: 347 PFFDELRDP 355
PFF ++ P
Sbjct: 292 PFFQDVTKP 300
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 69/309 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 74 I-------------------HTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQ 114
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + LA+ H+ + HRD+KPQNLL+ G P +Y + + +YR
Sbjct: 115 LLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 173
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 229
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 230 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 287
Query: 347 PFFDELRDP 355
PFF ++ P
Sbjct: 288 PFFQDVTKP 296
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 69/309 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 71 I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + LA+ H+ + HRD+KPQNLL+ G P +Y + + +YR
Sbjct: 112 LLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 170
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 226
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 227 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284
Query: 347 PFFDELRDP 355
PFF ++ P
Sbjct: 285 PFFQDVTKP 293
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 69/309 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 72 I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + LA+ H+ + HRD+KPQNLL+ G P +Y + + +YR
Sbjct: 113 LLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 171
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 227
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 228 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 285
Query: 347 PFFDELRDP 355
PFF ++ P
Sbjct: 286 PFFQDVTKP 294
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 69/309 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 75 I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 115
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + LA+ H+ + HRD+KPQNLL+ G P +Y + + +YR
Sbjct: 116 LLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 174
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 175 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 230
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 231 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 288
Query: 347 PFFDELRDP 355
PFF ++ P
Sbjct: 289 PFFQDVTKP 297
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 69/309 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 72 I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + LA+ H+ + HRD+KPQNLL+ G P +Y + + +YR
Sbjct: 113 LLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 171
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 227
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 228 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 285
Query: 347 PFFDELRDP 355
PFF ++ P
Sbjct: 286 PFFQDVTKP 294
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 69/309 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 70 I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + LA+ H+ + HRD+KPQNLL+ G P +Y + + +YR
Sbjct: 111 LLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 169
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 225
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 226 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283
Query: 347 PFFDELRDP 355
PFF ++ P
Sbjct: 284 PFFQDVTKP 292
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 69/309 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 70 I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + LA+ H+ + HRD+KPQNLL+ G P +Y + + +YR
Sbjct: 111 LLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 169
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 225
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 226 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283
Query: 347 PFFDELRDP 355
PFF ++ P
Sbjct: 284 PFFQDVTKP 292
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 69/309 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 71 I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + LA+ H+ + HRD+KPQNLL+ G P +Y + + +YR
Sbjct: 112 LLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 170
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 226
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 227 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284
Query: 347 PFFDELRDP 355
PFF ++ P
Sbjct: 285 PFFQDVTKP 293
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 69/309 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 72 I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + LA+ H+ + HRD+KPQNLL+ G P +Y + + +YR
Sbjct: 113 LLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 171
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 227
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 228 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 285
Query: 347 PFFDELRDP 355
PFF ++ P
Sbjct: 286 PFFQDVTKP 294
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 69/309 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 71 I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + LA+ H+ + HRD+KPQNLL+ G P +Y + + +YR
Sbjct: 112 LLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 170
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 226
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 227 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284
Query: 347 PFFDELRDP 355
PFF ++ P
Sbjct: 285 PFFQDVTKP 293
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 152/297 (51%), Gaps = 45/297 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
T +K ++ A +PL +K Y +Q+ + LA+ H+
Sbjct: 73 I-HTENKLYLVFEFLSMDLKDFMDASALT------GIPLPLIKSYLFQLLQGLAFCHSH- 124
Query: 204 GICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYRAPELIFGATEYT 244
+ HRD+KPQNLL+ G P +Y + + +YRAPE++ G Y+
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 245 TAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 304
TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + + P T P
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTS--MPD 238
Query: 305 IKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 355
KP W + F K +PP + L+ + Y PN R +A A HPFF ++ P
Sbjct: 239 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 152/297 (51%), Gaps = 45/297 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
T +K ++ A +PL +K Y +Q+ + LA+ H+
Sbjct: 74 I-HTENKLYLVFEFLSMDLKDFMDASALT------GIPLPLIKSYLFQLLQGLAFCHSH- 125
Query: 204 GICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYRAPELIFGATEYT 244
+ HRD+KPQNLL+ G P +Y + + +YRAPE++ G Y+
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 245 TAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 304
TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + + P T P
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTS--MPD 239
Query: 305 IKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 355
KP W + F K +PP + L+ + Y PN R +A A HPFF ++ P
Sbjct: 240 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 152/297 (51%), Gaps = 45/297 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
T +K ++ A +PL +K Y +Q+ + LA+ H+
Sbjct: 74 I-HTENKLYLVFEHVDQDLKKFMDASALT------GIPLPLIKSYLFQLLQGLAFCHSH- 125
Query: 204 GICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYRAPELIFGATEYT 244
+ HRD+KPQNLL+ G P +Y + + +YRAPE++ G Y+
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 245 TAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 304
TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + + P T P
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTS--MPD 239
Query: 305 IKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 355
KP W + F K +PP + L+ + Y PN R +A A HPFF ++ P
Sbjct: 240 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 154/309 (49%), Gaps = 69/309 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 72 I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + LA+ H+ + HRD+KP+NLL+ G P +Y + + +YR
Sbjct: 113 LLQGLAFCHSH-RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 171
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 227
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 228 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 285
Query: 347 PFFDELRDP 355
PFF ++ P
Sbjct: 286 PFFQDVTKP 294
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 154/309 (49%), Gaps = 69/309 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 73 I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 113
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + LA+ H+ + HRD+KP+NLL+ G P +Y + + +YR
Sbjct: 114 LLQGLAFCHSH-RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 172
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 228
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 229 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 286
Query: 347 PFFDELRDP 355
PFF ++ P
Sbjct: 287 PFFQDVTKP 295
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 154/309 (49%), Gaps = 69/309 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 71 I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + L++ H+ + HRD+KPQNLL+ G P +Y + + +YR
Sbjct: 112 LLQGLSFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 170
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 226
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 227 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284
Query: 347 PFFDELRDP 355
PFF ++ P
Sbjct: 285 PFFQDVTKP 293
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 154/309 (49%), Gaps = 69/309 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 71 I-------------------HTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQ 111
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + LA+ H+ + HRD+KP+NLL+ G P +Y + + +YR
Sbjct: 112 LLQGLAFCHSH-RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 170
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 226
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 227 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284
Query: 347 PFFDELRDP 355
PFF ++ P
Sbjct: 285 PFFQDVTKP 293
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 150/323 (46%), Gaps = 62/323 (19%)
Query: 83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKN---RELQIMQMLDHPN 136
+Y++ VG+G++G V A + +GE VAIKK+ Q + + REL +++ + H N
Sbjct: 25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHEN 84
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKL--------- 187
++ L F T RN+ + MP + L
Sbjct: 85 VIGLLDVF--------------------TPASSLRNFYDFYLVMPFMQTDLQKIMGLKFS 124
Query: 188 ------YTYQICRALAYIHNCIGICHRDIKPQNLLVKGEPNV----------------SY 225
YQ+ + L YIH+ G+ HRD+KP NL V + + Y
Sbjct: 125 EEKIQYLVYQMLKGLKYIHSA-GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGY 183
Query: 226 ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTP 285
+ +R+YRAPE+I Y +DIWS GC+MAE+L G+ LF G+ +DQL +I+KV G P
Sbjct: 184 VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVP 243
Query: 286 TREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLP---PEAVDLVCRFFQYSPNLRCTALE 342
E ++ +N + + Q P K F + P P+A DL+ + + + R TA +
Sbjct: 244 GTEFVQKLNDKAAK-SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQ 302
Query: 343 ACVHPFFDELRDPNTRLPNGRPL 365
A HPFF+ RDP +P
Sbjct: 303 ALTHPFFEPFRDPEEETEAQQPF 325
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 152/305 (49%), Gaps = 69/305 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 71 I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + LA+ H+ + HRD+KPQNLL+ G P +Y + + +YR
Sbjct: 112 LLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 170
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 226
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 227 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284
Query: 347 PFFDE 351
PFF +
Sbjct: 285 PFFQD 289
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 152/297 (51%), Gaps = 45/297 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
T +K ++ A +PL +K Y +Q+ + LA+ H+
Sbjct: 74 I-HTENKLYLVFEFLSMDLKKFMDASALT------GIPLPLIKSYLFQLLQGLAFCHSH- 125
Query: 204 GICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYRAPELIFGATEYT 244
+ HRD+KP+NLL+ G P +Y + + +YRAPE++ G Y+
Sbjct: 126 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 245 TAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 304
TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + + P T P
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTS--MPD 239
Query: 305 IKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 355
KP W + F K +PP + L+ + Y PN R +A A HPFF ++ P
Sbjct: 240 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 150/323 (46%), Gaps = 62/323 (19%)
Query: 83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKN---RELQIMQMLDHPN 136
+Y++ VG+G++G V A + +GE VAIKK+ Q + + REL +++ + H N
Sbjct: 43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHEN 102
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKL--------- 187
++ L F T RN+ + MP + L
Sbjct: 103 VIGLLDVF--------------------TPASSLRNFYDFYLVMPFMQTDLQKIMGMEFS 142
Query: 188 ------YTYQICRALAYIHNCIGICHRDIKPQNLLVKGEPNV----------------SY 225
YQ+ + L YIH+ G+ HRD+KP NL V + + Y
Sbjct: 143 EEKIQYLVYQMLKGLKYIHSA-GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGY 201
Query: 226 ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTP 285
+ +R+YRAPE+I Y +DIWS GC+MAE+L G+ LF G+ +DQL +I+KV G P
Sbjct: 202 VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVP 261
Query: 286 TREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLP---PEAVDLVCRFFQYSPNLRCTALE 342
E ++ +N + + Q P K F + P P+A DL+ + + + R TA +
Sbjct: 262 GTEFVQKLNDKAAK-SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQ 320
Query: 343 ACVHPFFDELRDPNTRLPNGRPL 365
A HPFF+ RDP +P
Sbjct: 321 ALTHPFFEPFRDPEEETEAQQPF 343
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 152/297 (51%), Gaps = 45/297 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+KK+ D + RE+ +++ L+HPNIV L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
T +K ++ A +PL +K Y +Q+ + LA+ H+
Sbjct: 72 I-HTENKLYLVFEFLSMDLKKFMDASALT------GIPLPLIKSYLFQLLQGLAFCHSH- 123
Query: 204 GICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYRAPELIFGATEYT 244
+ HRD+KP+NLL+ G P +Y + + +YRAPE++ G Y+
Sbjct: 124 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 245 TAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 304
TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + + P T P
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTS--MPD 237
Query: 305 IKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 355
KP W + F K +PP + L+ + Y PN R +A A HPFF ++ P
Sbjct: 238 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 153/309 (49%), Gaps = 69/309 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+ K+ D + RE+ +++ L+HPNIV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 71 I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + LA+ H+ + HRD+KPQNLL+ G P +Y + + +YR
Sbjct: 112 LLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 170
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 226
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 227 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284
Query: 347 PFFDELRDP 355
PFF ++ P
Sbjct: 285 PFFQDVTKP 293
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 153/309 (49%), Gaps = 69/309 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ + TGE+VA+ K+ D + RE+ +++ L+HPNIV L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
T N++ + +HQ + PL +K Y +Q
Sbjct: 70 I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYR 232
+ + LA+ H+ + HRD+KPQNLL+ G P +Y + + +YR
Sbjct: 111 LLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 169
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE++ G Y+TA+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP +
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EV 225
Query: 293 MNPNYTEFKFPQIKPH--PWHKV-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVH 346
+ P T P KP W + F K +PP + L+ + Y PN R +A A H
Sbjct: 226 VWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283
Query: 347 PFFDELRDP 355
PFF ++ P
Sbjct: 284 PFFQDVTKP 292
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 150 bits (380), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 146/291 (50%), Gaps = 44/291 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---------RELQIMQMLDHPNIVAL 140
+G G F V++A+ + T +IVAIKK+ R + RE++++Q L HPNI+ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
F ++ + I ++ S + + ++K Y + L Y+H
Sbjct: 78 LDAFGHKSN-----ISLVFDFMETDLEVIIKDNSLV---LTPSHIKAYMLMTLQGLEYLH 129
Query: 201 NCIGICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYRAPELIFGAT 241
I HRD+KP NLL+ G PN +Y + +R+YRAPEL+FGA
Sbjct: 130 QH-WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGAR 188
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI--KCMNPNYTE 299
Y +D+W+ GC++AELLL P PG+S +DQL I + LGTPT E+ C P+Y
Sbjct: 189 MYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT 248
Query: 300 FK-FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFF 349
FK FP I P H +F + +DL+ F ++P R TA +A +F
Sbjct: 249 FKSFPGI---PLHHIFSAA-GDDLLDLIQGLFLFNPCARITATQALKMKYF 295
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 164/344 (47%), Gaps = 43/344 (12%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKK------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
+G G++GVV A+ R TG+ VAIKK V+ + + REL+I++ H NI+A+K
Sbjct: 61 TIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKD 120
Query: 143 CFFSTTDKXXXXXXXXXXXXXXT-VNRIARNYSRIHQRMPLI--YVKLYTYQICRALAYI 199
T + +++I IH PL +V+ + YQ+ R L Y+
Sbjct: 121 ILRPTVPYGEFKSVYVVLDLMESDLHQI------IHSSQPLTLEHVRYFLYQLLRGLKYM 174
Query: 200 HNCIGICHRDIKPQNLLVK-------GEPNVS----------------YICSRYYRAPEL 236
H+ + HRD+KP NLLV G+ ++ Y+ +R+YRAPEL
Sbjct: 175 HSA-QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 233
Query: 237 IFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 296
+ EYT AID+WS GC+ E+L + LFPG++ V QL I+ VLGTP+ I+ +
Sbjct: 234 MLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAE 293
Query: 297 YTEF---KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR 353
P +P PW V+ +A+ L+ R ++ P+ R +A A HPF +
Sbjct: 294 RVRAYIQSLPPRQPVPWETVYPG-ADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYH 352
Query: 354 DPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEHARKQNL 397
DP+ P F+ + I + + HAR++ +
Sbjct: 353 DPDDEPDCAPPFDFAFDREALTRERIKEAIVAEIEDFHARREGI 396
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 167/344 (48%), Gaps = 45/344 (13%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV--LQDKRYKNR---ELQIMQMLDHPNIV 138
Y +G G++G+V A VAIKK+ + + Y R E+QI+ H N++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
++ ++T + + ++ ++ Q++ ++ + YQI R L Y
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKS-----QQLSNDHICYFLYQILRGLKY 159
Query: 199 IHNCIGICHRDIKPQNLLVK---------------GEPN-------VSYICSRYYRAPEL 236
IH+ + HRD+KP NLL+ +P + +R+YRAPE+
Sbjct: 160 IHSA-NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEI 218
Query: 237 IFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM--- 293
+ + YT +IDIWS GC++AE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINM 278
Query: 294 -NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL 352
NY + P W K+F K +A+DL+ R ++PN R T EA HP+ ++
Sbjct: 279 KARNYLQ-SLPSKTKVAWAKLFPKS-DSKALDLLDRMLTFNPNKRITVEEALAHPYLEQY 336
Query: 353 RDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLI-PEHARKQ 395
DP P F F EL +P E + LI E AR Q
Sbjct: 337 YDPTDEPVAEEP----FTFA-MELDDLPKERLKELIFQETARFQ 375
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 164/344 (47%), Gaps = 43/344 (12%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKK------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
+G G++GVV A+ R TG+ VAIKK V+ + + REL+I++ H NI+A+K
Sbjct: 62 TIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKD 121
Query: 143 CFFSTTDKXXXXXXXXXXXXXXT-VNRIARNYSRIHQRMPLI--YVKLYTYQICRALAYI 199
T + +++I IH PL +V+ + YQ+ R L Y+
Sbjct: 122 ILRPTVPYGEFKSVYVVLDLMESDLHQI------IHSSQPLTLEHVRYFLYQLLRGLKYM 175
Query: 200 HNCIGICHRDIKPQNLLVK-------GEPNVS----------------YICSRYYRAPEL 236
H+ + HRD+KP NLLV G+ ++ Y+ +R+YRAPEL
Sbjct: 176 HSA-QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 234
Query: 237 IFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 296
+ EYT AID+WS GC+ E+L + LFPG++ V QL I+ VLGTP+ I+ +
Sbjct: 235 MLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAE 294
Query: 297 YTEF---KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR 353
P +P PW V+ +A+ L+ R ++ P+ R +A A HPF +
Sbjct: 295 RVRAYIQSLPPRQPVPWETVYPG-ADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYH 353
Query: 354 DPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEHARKQNL 397
DP+ P F+ + I + + HAR++ +
Sbjct: 354 DPDDEPDCAPPFDFAFDREALTRERIKEAIVAEIEDFHARREGI 397
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 143/300 (47%), Gaps = 32/300 (10%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV------LQDKRYKNRELQIMQMLDHPNIVALKHC 143
VG+G++G V A + VA+KK+ L R REL++++ L H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 144 FF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F +T+ + +N I ++ Q + +V+ YQ+ R L YIH+
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGADLNNIVKS-----QALSDEHVQFLVYQLLRGLKYIHSA 150
Query: 203 IGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTTA 246
GI HRD+KP N+ V E Y+ +R+YRAPE++ Y
Sbjct: 151 -GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 247 IDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIK 306
+DIWS GC+MAELL G+ LFPG +DQL I++V+GTP+ E + ++ + +
Sbjct: 210 VDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLP 269
Query: 307 PHPWHKVFQ--KRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRP 364
P P + + P A+DL+ R + R +A EA H +F + DP P P
Sbjct: 270 PMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDE-PEAEP 328
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 157/319 (49%), Gaps = 46/319 (14%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNRELQIMQMLDHPNIVALKHC 143
++G G++GVV A + TGEIVAIKK+ + RE++I++ H NI+ + +
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
+ + ++R+ Q + +++ + YQ RA+ +H
Sbjct: 78 QRPDSFENFNEVYIIQELMQTDLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLHGS- 131
Query: 204 GICHRDIKPQNLLVKG-----------------------EPN------VSYICSRYYRAP 234
+ HRD+KP NLL+ EP V ++ +R+YRAP
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAP 191
Query: 235 ELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTP-TREEIKCM 293
E++ + +Y+ A+D+WS GC++AEL L +P+FPG QL+ I ++GTP + +++C+
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCI 251
Query: 294 -NPNYTEF--KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFD 350
+P E+ P P K+F R+ P+ +DL+ R + P R TA EA HP+
Sbjct: 252 ESPRAREYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQ 310
Query: 351 ELRDPNTRLPNGRPLPPLF 369
DPN P G P+PP F
Sbjct: 311 TYHDPNDE-PEGEPIPPSF 328
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 156/319 (48%), Gaps = 46/319 (14%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNRELQIMQMLDHPNIVALKHC 143
++G G++GVV A + TGEIVAIKK+ + RE++I++ H NI+ + +
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
+ + ++R+ Q + +++ + YQ RA+ +H
Sbjct: 78 QRPDSFENFNEVYIIQELMQTDLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLHGS- 131
Query: 204 GICHRDIKPQNLLVKG-----------------------EPN------VSYICSRYYRAP 234
+ HRD+KP NLL+ EP Y+ +R+YRAP
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAP 191
Query: 235 ELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTP-TREEIKCM 293
E++ + +Y+ A+D+WS GC++AEL L +P+FPG QL+ I ++GTP + +++C+
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCI 251
Query: 294 -NPNYTEF--KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFD 350
+P E+ P P K+F R+ P+ +DL+ R + P R TA EA HP+
Sbjct: 252 ESPRAREYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQ 310
Query: 351 ELRDPNTRLPNGRPLPPLF 369
DPN P G P+PP F
Sbjct: 311 TYHDPNDE-PEGEPIPPSF 328
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 142/300 (47%), Gaps = 32/300 (10%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV------LQDKRYKNRELQIMQMLDHPNIVALKHC 143
VG+G++G V A + VA+KK+ L R REL++++ L H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 144 FF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F +T+ + +N I + Q + +V+ YQ+ R L YIH+
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGADLNNIVKC-----QALSDEHVQFLVYQLLRGLKYIHSA 150
Query: 203 IGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTTA 246
GI HRD+KP N+ V E Y+ +R+YRAPE++ Y
Sbjct: 151 -GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 247 IDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIK 306
+DIWS GC+MAELL G+ LFPG +DQL I++V+GTP+ E + ++ + +
Sbjct: 210 VDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLP 269
Query: 307 PHPWHKVFQ--KRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRP 364
P P + + P A+DL+ R + R +A EA H +F + DP P P
Sbjct: 270 PMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDE-PEAEP 328
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 142/300 (47%), Gaps = 32/300 (10%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV------LQDKRYKNRELQIMQMLDHPNIVALKHC 143
VG+G++G V A + VA+KK+ L R REL++++ L H N++ L
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 144 FF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F +T+ + +N I + Q + +V+ YQ+ R L YIH+
Sbjct: 88 FTPATSIEDFSEVYLVTTLMGADLNNIVKC-----QALSDEHVQFLVYQLLRGLKYIHSA 142
Query: 203 IGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTTA 246
GI HRD+KP N+ V E Y+ +R+YRAPE++ Y
Sbjct: 143 -GIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQT 201
Query: 247 IDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIK 306
+DIWS GC+MAELL G+ LFPG +DQL I++V+GTP+ E + ++ + +
Sbjct: 202 VDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLP 261
Query: 307 PHPWHKVFQ--KRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRP 364
P P + + P A+DL+ R + R +A EA H +F + DP P P
Sbjct: 262 PMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDE-PEAEP 320
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 156/332 (46%), Gaps = 74/332 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQ------DKRYKNRELQIMQMLD-HPNIVALKH 142
+G G++G+V+++ R TGE+VA+KK+ D + RE+ I+ L H NIV L +
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ D+ V R A +H++ YV YQ+ + + Y+H+
Sbjct: 77 VLRADNDRDVYLVFDYMETDLHAVIR-ANILEPVHKQ----YV---VYQLIKVIKYLHSG 128
Query: 203 IGICHRDIKPQNLLVKGEPNV--------------------------------------- 223
G+ HRD+KP N+L+ E +V
Sbjct: 129 -GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 224 -SYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVL 282
Y+ +R+YRAPE++ G+T+YT ID+WS GC++ E+L G+P+FPG S ++QL II V+
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVI 247
Query: 283 GTPTREEIKCMNPNYTEFKFPQIKPH-------------PWHKVFQKRLPP-----EAVD 324
P+ E+++ + + + +K W + K P EA+D
Sbjct: 248 DFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALD 307
Query: 325 LVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
L+ + Q++PN R +A +A HPF +PN
Sbjct: 308 LLDKLLQFNPNKRISANDALKHPFVSIFHNPN 339
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 155/319 (48%), Gaps = 46/319 (14%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNRELQIMQMLDHPNIVALKHC 143
++G G++GVV A + TGEIVAIKK+ + RE++I++ H NI+ + +
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
+ + ++R+ Q + +++ + YQ RA+ +H
Sbjct: 78 QRPDSFENFNEVYIIQELMQTDLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLHGS- 131
Query: 204 GICHRDIKPQNLLVKG-----------------------EPN------VSYICSRYYRAP 234
+ HRD+KP NLL+ EP + +R+YRAP
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAP 191
Query: 235 ELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTP-TREEIKCM 293
E++ + +Y+ A+D+WS GC++AEL L +P+FPG QL+ I ++GTP + +++C+
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCI 251
Query: 294 -NPNYTEF--KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFD 350
+P E+ P P K+F R+ P+ +DL+ R + P R TA EA HP+
Sbjct: 252 ESPRAREYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQ 310
Query: 351 ELRDPNTRLPNGRPLPPLF 369
DPN P G P+PP F
Sbjct: 311 TYHDPNDE-PEGEPIPPSF 328
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 151/294 (51%), Gaps = 39/294 (13%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
VG G++GVV++AK + G IVA+K++ D + RE+ +++ L HPNIV+L
Sbjct: 29 VGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
S ++ V + N + + +K+Y YQ+ R +A+ H
Sbjct: 88 IHS--ERCLTLVFEFMEKDLKKV--LDENKTGLQDSQ----IKIYLYQLLRGVAHCHQH- 138
Query: 204 GICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYRAPELIFGATEYT 244
I HRD+KPQNLL+ G P SY + + +YRAP+++ G+ +Y+
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYS 198
Query: 245 TAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKF 302
T++DIWS GC+ AE++ G+PLFPG + DQL +I +LGTP E + P + + F
Sbjct: 199 TSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTF 258
Query: 303 PQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
+ PW + E +DL+ + PN R +A +A HP+F +L DP
Sbjct: 259 QVFEKKPWSSIIPG-FCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL-DPQ 310
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 144 bits (363), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 151/294 (51%), Gaps = 39/294 (13%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
VG G++GVV++AK + G IVA+K++ D + RE+ +++ L HPNIV+L
Sbjct: 29 VGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
S ++ V + N + + +K+Y YQ+ R +A+ H
Sbjct: 88 IHS--ERCLTLVFEFMEKDLKKV--LDENKTGLQDSQ----IKIYLYQLLRGVAHCHQH- 138
Query: 204 GICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYRAPELIFGATEYT 244
I HRD+KPQNLL+ G P SY + + +YRAP+++ G+ +Y+
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYS 198
Query: 245 TAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKF 302
T++DIWS GC+ AE++ G+PLFPG + DQL +I +LGTP E + P + + F
Sbjct: 199 TSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTF 258
Query: 303 PQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
+ PW + E +DL+ + PN R +A +A HP+F +L DP
Sbjct: 259 QVFEKKPWSSIIPG-FCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL-DPQ 310
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 164/338 (48%), Gaps = 45/338 (13%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV--LQDKRYKNR---ELQIMQMLDHPNIVALKHCF 144
+G G++G+V A VAIKK+ + + Y R E++I+ H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ T + + ++ + Q + ++ + YQI R L YIH+
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA-N 148
Query: 205 ICHRDIKPQNLLVK---------------GEPN-------VSYICSRYYRAPELIFGATE 242
+ HRD+KP NLL+ +P+ Y+ +R+YRAPE++ +
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPNYT 298
YT +IDIWS GC++AE+L +P+FPG+ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL 268
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR 358
P PW+++F +A+DL+ + ++P+ R +A HP+ ++ DP+
Sbjct: 269 -LSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 326
Query: 359 LPNGRPLPPLFNFKPPELSGIPPETINRLI-PEHARKQ 395
P F F EL +P E + LI E AR Q
Sbjct: 327 PIAEAP----FKFD-MELDDLPKEKLKELIFEETARFQ 359
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 164/338 (48%), Gaps = 45/338 (13%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV--LQDKRYKNR---ELQIMQMLDHPNIVALKHCF 144
+G G++G+V A VAIKK+ + + Y R E++I+ H NI+ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ T + + ++ + Q + ++ + YQI R L YIH+
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA-N 152
Query: 205 ICHRDIKPQNLLVK---------------GEPN-------VSYICSRYYRAPELIFGATE 242
+ HRD+KP NLL+ +P+ Y+ +R+YRAPE++ +
Sbjct: 153 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 212
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPNYT 298
YT +IDIWS GC++AE+L +P+FPG+ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 213 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL 272
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR 358
P PW+++F +A+DL+ + ++P+ R +A HP+ ++ DP+
Sbjct: 273 -LSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 330
Query: 359 LPNGRPLPPLFNFKPPELSGIPPETINRLI-PEHARKQ 395
P F F EL +P E + LI E AR Q
Sbjct: 331 PIAEAP----FKFD-MELDDLPKEKLKELIFEETARFQ 363
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 164/338 (48%), Gaps = 45/338 (13%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV--LQDKRYKNR---ELQIMQMLDHPNIVALKHCF 144
+G G++G+V A VAIKK+ + + Y R E++I+ H NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ T + + ++ + Q + ++ + YQI R L YIH+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA-N 144
Query: 205 ICHRDIKPQNLLVK---------------GEPN-------VSYICSRYYRAPELIFGATE 242
+ HRD+KP NLL+ +P+ Y+ +R+YRAPE++ +
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPNYT 298
YT +IDIWS GC++AE+L +P+FPG+ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL 264
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR 358
P PW+++F +A+DL+ + ++P+ R +A HP+ ++ DP+
Sbjct: 265 -LSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 322
Query: 359 LPNGRPLPPLFNFKPPELSGIPPETINRLI-PEHARKQ 395
P F F EL +P E + LI E AR Q
Sbjct: 323 PIAEAP----FKFD-MELDDLPKEKLKELIFEETARFQ 355
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 164/338 (48%), Gaps = 45/338 (13%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV--LQDKRYKNR---ELQIMQMLDHPNIVALKHCF 144
+G G++G+V A VAIKK+ + + Y R E++I+ H NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ T + + ++ + Q + ++ + YQI R L YIH+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA-N 144
Query: 205 ICHRDIKPQNLLVK---------------GEPN-------VSYICSRYYRAPELIFGATE 242
+ HRD+KP NLL+ +P+ Y+ +R+YRAPE++ +
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPNYT 298
YT +IDIWS GC++AE+L +P+FPG+ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL 264
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR 358
P PW+++F +A+DL+ + ++P+ R +A HP+ ++ DP+
Sbjct: 265 -LSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 322
Query: 359 LPNGRPLPPLFNFKPPELSGIPPETINRLI-PEHARKQ 395
P F F EL +P E + LI E AR Q
Sbjct: 323 PIAEAP----FKFD-MELDDLPKEKLKELIFEETARFQ 355
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 164/338 (48%), Gaps = 45/338 (13%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV--LQDKRYKNR---ELQIMQMLDHPNIVALKHCF 144
+G G++G+V A VAIKK+ + + Y R E++I+ H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ T + + ++ + Q + ++ + YQI R L YIH+
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA-N 148
Query: 205 ICHRDIKPQNLLVK---------------GEPN-------VSYICSRYYRAPELIFGATE 242
+ HRD+KP NLL+ +P+ Y+ +R+YRAPE++ +
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPNYT 298
YT +IDIWS GC++AE+L +P+FPG+ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL 268
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR 358
P PW+++F +A+DL+ + ++P+ R +A HP+ ++ DP+
Sbjct: 269 -LSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 326
Query: 359 LPNGRPLPPLFNFKPPELSGIPPETINRLI-PEHARKQ 395
P F F EL +P E + LI E AR Q
Sbjct: 327 PIAEAP----FKFD-MELDDLPKEKLKELIFEETARFQ 359
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 164/338 (48%), Gaps = 45/338 (13%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV--LQDKRYKNR---ELQIMQMLDHPNIVALKHCF 144
+G G++G+V A VAIKK+ + + Y R E++I+ H NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ T + + ++ + Q + ++ + YQI R L YIH+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA-N 144
Query: 205 ICHRDIKPQNLLVK---------------GEPN-------VSYICSRYYRAPELIFGATE 242
+ HRD+KP NLL+ +P+ Y+ +R+YRAPE++ +
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPNYT 298
YT +IDIWS GC++AE+L +P+FPG+ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL 264
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR 358
P PW+++F +A+DL+ + ++P+ R +A HP+ ++ DP+
Sbjct: 265 -LSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 322
Query: 359 LPNGRPLPPLFNFKPPELSGIPPETINRLI-PEHARKQ 395
P F F EL +P E + LI E AR Q
Sbjct: 323 PIAEAP----FKFD-MELDDLPKEKLKELIFEETARFQ 355
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 164/338 (48%), Gaps = 45/338 (13%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV--LQDKRYKNR---ELQIMQMLDHPNIVALKHCF 144
+G G++G+V A VAIKK+ + + Y R E++I+ H NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ T + + ++ + Q + ++ + YQI R L YIH+
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA-N 146
Query: 205 ICHRDIKPQNLLVK---------------GEPN-------VSYICSRYYRAPELIFGATE 242
+ HRD+KP NLL+ +P+ Y+ +R+YRAPE++ +
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPNYT 298
YT +IDIWS GC++AE+L +P+FPG+ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 207 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL 266
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR 358
P PW+++F +A+DL+ + ++P+ R +A HP+ ++ DP+
Sbjct: 267 -LSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 324
Query: 359 LPNGRPLPPLFNFKPPELSGIPPETINRLI-PEHARKQ 395
P F F EL +P E + LI E AR Q
Sbjct: 325 PIAEAP----FKFD-MELDDLPKEKLKELIFEETARFQ 357
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 164/338 (48%), Gaps = 45/338 (13%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV--LQDKRYKNR---ELQIMQMLDHPNIVALKHCF 144
+G G++G+V A VAIKK+ + + Y R E++I+ H NI+ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ T + + ++ + Q + ++ + YQI R L YIH+
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA-N 164
Query: 205 ICHRDIKPQNLLVK---------------GEPN-------VSYICSRYYRAPELIFGATE 242
+ HRD+KP NLL+ +P+ Y+ +R+YRAPE++ +
Sbjct: 165 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 224
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPNYT 298
YT +IDIWS GC++AE+L +P+FPG+ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 225 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL 284
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR 358
P PW+++F +A+DL+ + ++P+ R +A HP+ ++ DP+
Sbjct: 285 -LSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 342
Query: 359 LPNGRPLPPLFNFKPPELSGIPPETINRLI-PEHARKQ 395
P F F EL +P E + LI E AR Q
Sbjct: 343 PIAEAP----FKFD-MELDDLPKEKLKELIFEETARFQ 375
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 164/338 (48%), Gaps = 45/338 (13%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV--LQDKRYKNR---ELQIMQMLDHPNIVALKHCF 144
+G G++G+V A VAIKK+ + + Y R E++I+ H NI+ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ T + + ++ + Q + ++ + YQI R L YIH+
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA-N 164
Query: 205 ICHRDIKPQNLLVK---------------GEPN-------VSYICSRYYRAPELIFGATE 242
+ HRD+KP NLL+ +P+ Y+ +R+YRAPE++ +
Sbjct: 165 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 224
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPNYT 298
YT +IDIWS GC++AE+L +P+FPG+ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 225 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL 284
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR 358
P PW+++F +A+DL+ + ++P+ R +A HP+ ++ DP+
Sbjct: 285 -LSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 342
Query: 359 LPNGRPLPPLFNFKPPELSGIPPETINRLI-PEHARKQ 395
P F F EL +P E + LI E AR Q
Sbjct: 343 PIAEAP----FKFD-MELDDLPKEKLKELIFEETARFQ 375
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 164/338 (48%), Gaps = 45/338 (13%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV--LQDKRYKNR---ELQIMQMLDHPNIVALKHCF 144
+G G++G+V A VAIKK+ + + Y R E++I+ H NI+ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ T + + ++ + Q + ++ + YQI R L YIH+
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA-N 142
Query: 205 ICHRDIKPQNLLVK---------------GEPN-------VSYICSRYYRAPELIFGATE 242
+ HRD+KP NLL+ +P+ Y+ +R+YRAPE++ +
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 202
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPNYT 298
YT +IDIWS GC++AE+L +P+FPG+ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 203 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL 262
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR 358
P PW+++F +A+DL+ + ++P+ R +A HP+ ++ DP+
Sbjct: 263 -LSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 320
Query: 359 LPNGRPLPPLFNFKPPELSGIPPETINRLI-PEHARKQ 395
P F F EL +P E + LI E AR Q
Sbjct: 321 PIAEAP----FKFD-MELDDLPKEKLKELIFEETARFQ 353
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 164/338 (48%), Gaps = 45/338 (13%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV--LQDKRYKNR---ELQIMQMLDHPNIVALKHCF 144
+G G++G+V A VAIKK+ + + Y R E++I+ H NI+ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ T + + ++ + Q + ++ + YQI R L YIH+
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA-N 149
Query: 205 ICHRDIKPQNLLVK---------------GEPN-------VSYICSRYYRAPELIFGATE 242
+ HRD+KP NLL+ +P+ Y+ +R+YRAPE++ +
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 209
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPNYT 298
YT +IDIWS GC++AE+L +P+FPG+ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 210 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL 269
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR 358
P PW+++F +A+DL+ + ++P+ R +A HP+ ++ DP+
Sbjct: 270 -LSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 327
Query: 359 LPNGRPLPPLFNFKPPELSGIPPETINRLI-PEHARKQ 395
P F F EL +P E + LI E AR Q
Sbjct: 328 PIAEAP----FKFD-MELDDLPKEKLKELIFEETARFQ 360
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 164/338 (48%), Gaps = 45/338 (13%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV--LQDKRYKNR---ELQIMQMLDHPNIVALKHCF 144
+G G++G+V A VAIKK+ + + Y R E++I+ H NI+ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ T + + ++ + Q + ++ + YQI R L YIH+
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA-N 150
Query: 205 ICHRDIKPQNLLVK---------------GEPN-------VSYICSRYYRAPELIFGATE 242
+ HRD+KP NLL+ +P+ Y+ +R+YRAPE++ +
Sbjct: 151 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 210
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPNYT 298
YT +IDIWS GC++AE+L +P+FPG+ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 211 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL 270
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR 358
P PW+++F +A+DL+ + ++P+ R +A HP+ ++ DP+
Sbjct: 271 -LSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 328
Query: 359 LPNGRPLPPLFNFKPPELSGIPPETINRLI-PEHARKQ 395
P F F EL +P E + LI E AR Q
Sbjct: 329 PIAEAP----FKFD-MELDDLPKEKLKELIFEETARFQ 361
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 164/338 (48%), Gaps = 45/338 (13%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV--LQDKRYKNR---ELQIMQMLDHPNIVALKHCF 144
+G G++G+V A VAIKK+ + + Y R E++I+ H NI+ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ T + + ++ + Q + ++ + YQI R L YIH+
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA-N 141
Query: 205 ICHRDIKPQNLLVK---------------GEPN-------VSYICSRYYRAPELIFGATE 242
+ HRD+KP NLL+ +P+ Y+ +R+YRAPE++ +
Sbjct: 142 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 201
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPNYT 298
YT +IDIWS GC++AE+L +P+FPG+ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 202 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL 261
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR 358
P PW+++F +A+DL+ + ++P+ R +A HP+ ++ DP+
Sbjct: 262 -LSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 319
Query: 359 LPNGRPLPPLFNFKPPELSGIPPETINRLI-PEHARKQ 395
P F F EL +P E + LI E AR Q
Sbjct: 320 PIAEAP----FKFD-MELDDLPKEKLKELIFEETARFQ 352
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 164/338 (48%), Gaps = 45/338 (13%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV--LQDKRYKNR---ELQIMQMLDHPNIVALKHCF 144
+G G++G+V A VAIKK+ + + Y R E++I+ H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ T + + ++ + Q + ++ + YQI R L YIH+
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA-N 148
Query: 205 ICHRDIKPQNLLVK---------------GEPN-------VSYICSRYYRAPELIFGATE 242
+ HRD+KP NLL+ +P+ Y+ +R+YRAPE++ +
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPNYT 298
YT +IDIWS GC++AE+L +P+FPG+ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL 268
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR 358
P PW+++F +A+DL+ + ++P+ R +A HP+ ++ DP+
Sbjct: 269 -LSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 326
Query: 359 LPNGRPLPPLFNFKPPELSGIPPETINRLI-PEHARKQ 395
P F F EL +P E + LI E AR Q
Sbjct: 327 PIAEAP----FKFD-MELDDLPKEKLKELIFEETARFQ 359
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 147/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I ++ Q++ +V+ YQI R L YIH+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKS-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 CIGICHRDIKPQNLLVKGEPNV----------------SYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + + Y+ +R+YRAPE++ Y
Sbjct: 144 A-DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 261
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 262 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 163/338 (48%), Gaps = 45/338 (13%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV--LQDKRYKNR---ELQIMQMLDHPNIVALKHCF 144
+G G++G+V A VAIKK+ + + Y R E++I+ H NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ T + + ++ + Q + ++ + YQI R L YIH+
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA-N 146
Query: 205 ICHRDIKPQNLLVK---------------GEPN-------VSYICSRYYRAPELIFGATE 242
+ HRD+KP NLL+ +P+ Y+ +R+YRAPE++ +
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPNYT 298
YT +IDIWS GC++AE+L +P+FPG+ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 207 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL 266
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR 358
P PW+++F +A+DL+ + ++P+ R +A HP+ + DP+
Sbjct: 267 -LSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDPSDE 324
Query: 359 LPNGRPLPPLFNFKPPELSGIPPETINRLI-PEHARKQ 395
P F F EL +P E + LI E AR Q
Sbjct: 325 PIAEAP----FKFD-MELDDLPKEKLKELIFEETARFQ 357
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 69/304 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ GE A+KK+ +K + RE+ I++ L H NIV L
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMP-----------LIYVKLYTYQI 192
T R+ + + Q + + K + Q+
Sbjct: 69 I-------------------HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQL 109
Query: 193 CRALAYIHNCIGICHRDIKPQNLLV--KGEPNVS-----------------YICSRYYRA 233
+AY H+ + HRD+KPQNLL+ +GE ++ I + +YRA
Sbjct: 110 LNGIAYCHDR-RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRA 168
Query: 234 PELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE----- 288
P+++ G+ +Y+T IDIWS GC+ AE++ G PLFPG S DQL+ I ++LGTP +
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNV 228
Query: 289 -EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHP 347
E+ +PN+T + +P PW F K L +DL+ + + PN R TA +A H
Sbjct: 229 TELPKYDPNFTVY-----EPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAKQALEHA 282
Query: 348 FFDE 351
+F E
Sbjct: 283 YFKE 286
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 161/337 (47%), Gaps = 43/337 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV--LQDKRYKNR---ELQIMQMLDHPNIVALKHCF 144
+G G++G+V A VAIKK+ + + Y R E++I+ H NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ T + + ++ + Q + ++ + YQI R L YIH+
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA-N 146
Query: 205 ICHRDIKPQNLLVK---------------GEPN-------VSYICSRYYRAPELIFGATE 242
+ HRD+KP NLL+ +P+ Y+ +R+YRAPE++ +
Sbjct: 147 VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC---MNPNYTE 299
YT +IDIWS GC++AE+L +P+FPG+ +DQL I+ +LG+P++E++ C +
Sbjct: 207 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARNYL 266
Query: 300 FKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRL 359
P PW+++F +A+DL+ + ++P+ R +A HP+ + DP+
Sbjct: 267 LSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDPSDEP 325
Query: 360 PNGRPLPPLFNFKPPELSGIPPETINRLI-PEHARKQ 395
P F F EL +P E + LI E AR Q
Sbjct: 326 IAEAP----FKFD-MELDDLPKEKLKELIFEETARFQ 357
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 163/338 (48%), Gaps = 45/338 (13%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV--LQDKRYKNR---ELQIMQMLDHPNIVALKHCF 144
+G G++G+V A VAIKK+ + + Y R E++I+ H NI+ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ T + + ++ + Q + ++ + YQI R L YIH+
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA-N 142
Query: 205 ICHRDIKPQNLLVK---------------GEPN-------VSYICSRYYRAPELIFGATE 242
+ HRD+KP NLL+ +P+ Y+ +R+YRAPE++ +
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 202
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPNYT 298
YT +IDIWS GC++AE+L +P+FPG+ +DQL I+ +LG+P +E++ C+ NY
Sbjct: 203 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKARNYL 262
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR 358
P PW+++F +A+DL+ + ++P+ R +A HP+ ++ DP+
Sbjct: 263 -LSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 320
Query: 359 LPNGRPLPPLFNFKPPELSGIPPETINRLI-PEHARKQ 395
P F F EL +P E + LI E AR Q
Sbjct: 321 PIAEAP----FKFD-MELDDLPKEKLKELIFEETARFQ 353
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 164/338 (48%), Gaps = 45/338 (13%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV--LQDKRYKNR---ELQIMQMLDHPNIVALKHCF 144
+G G++G+V A VAI+K+ + + Y R E++I+ H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ T + + ++ + Q + ++ + YQI R L YIH+
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA-N 148
Query: 205 ICHRDIKPQNLLVK---------------GEPN-------VSYICSRYYRAPELIFGATE 242
+ HRD+KP NLL+ +P+ Y+ +R+YRAPE++ +
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPNYT 298
YT +IDIWS GC++AE+L +P+FPG+ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL 268
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR 358
P PW+++F +A+DL+ + ++P+ R +A HP+ ++ DP+
Sbjct: 269 -LSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 326
Query: 359 LPNGRPLPPLFNFKPPELSGIPPETINRLI-PEHARKQ 395
P F F EL +P E + LI E AR Q
Sbjct: 327 PIAEAP----FKFD-MELDDLPKEKLKELIFEETARFQ 359
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 150/315 (47%), Gaps = 38/315 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V + ++G +A+KK ++ KR REL++++ + H N++ L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 117
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F +T+ + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 118 VFTPATSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 172
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 173 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNM 231
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG ++QL +I+++ GTP I M NY
Sbjct: 232 TVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEARNYIN-S 290
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPN 361
PQ+ + VF P AVDL+ + + R TA EA HP+F + DP+ P
Sbjct: 291 LPQMPKRNFADVFIGA-NPLAVDLLEKMLVLDTDKRITASEALAHPYFSQYHDPDDE-PE 348
Query: 362 GRPLPPLFNFKPPEL 376
P F + E+
Sbjct: 349 SEPYDQSFESRQLEI 363
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 146/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ A Y
Sbjct: 144 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNAMHYNQ 202
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 261
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 262 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 147/304 (48%), Gaps = 69/304 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ GE A+KK+ +K + RE+ I++ L H NIV L
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMP-----------LIYVKLYTYQI 192
T R+ + + Q + + K + Q+
Sbjct: 69 I-------------------HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQL 109
Query: 193 CRALAYIHNCIGICHRDIKPQNLLV--KGEPNVS-----------------YICSRYYRA 233
+AY H+ + HRD+KPQNLL+ +GE ++ + + +YRA
Sbjct: 110 LNGIAYCHDR-RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRA 168
Query: 234 PELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE----- 288
P+++ G+ +Y+T IDIWS GC+ AE++ G PLFPG S DQL+ I ++LGTP +
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNV 228
Query: 289 -EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHP 347
E+ +PN+T + +P PW F K L +DL+ + + PN R TA +A H
Sbjct: 229 TELPKYDPNFTVY-----EPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAKQALEHA 282
Query: 348 FFDE 351
+F E
Sbjct: 283 YFKE 286
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 146/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKX-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 CIGICHRDIKPQNLLVKGEPNV----------------SYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + + Y+ +R+YRAPE++ Y
Sbjct: 144 A-DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 261
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 262 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 147/304 (48%), Gaps = 69/304 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++GVV++A+ GE A+KK+ +K + RE+ I++ L H NIV L
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMP-----------LIYVKLYTYQI 192
T R+ + + Q + + K + Q+
Sbjct: 69 I-------------------HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQL 109
Query: 193 CRALAYIHNCIGICHRDIKPQNLLV--KGEPNVS-----------------YICSRYYRA 233
+AY H+ + HRD+KPQNLL+ +GE ++ + + +YRA
Sbjct: 110 LNGIAYCHDR-RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRA 168
Query: 234 PELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE----- 288
P+++ G+ +Y+T IDIWS GC+ AE++ G PLFPG S DQL+ I ++LGTP +
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNV 228
Query: 289 -EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHP 347
E+ +PN+T + +P PW F K L +DL+ + + PN R TA +A H
Sbjct: 229 TELPKYDPNFTVY-----EPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAKQALEHA 282
Query: 348 FFDE 351
+F E
Sbjct: 283 YFKE 286
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 164/338 (48%), Gaps = 45/338 (13%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV--LQDKRYKNR---ELQIMQMLDHPNIVALKHCF 144
+G G++G+V A VAIKK+ + + Y R E++I+ H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ T + + ++ + Q + ++ + YQI R L YIH+
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKC-----QHLSNDHICYFLYQILRGLKYIHSA-N 148
Query: 205 ICHRDIKPQNLLVK---------------GEPN-------VSYICSRYYRAPELIFGATE 242
+ HRD+KP NLL+ +P+ Y+ +R+YRAPE++ +
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPNYT 298
YT +IDIWS GC++AE+L +P+FPG+ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL 268
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR 358
P PW+++F +A+DL+ + ++P+ R +A HP+ ++ DP+
Sbjct: 269 -LSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 326
Query: 359 LPNGRPLPPLFNFKPPELSGIPPETINRLI-PEHARKQ 395
P F F EL +P E + LI E AR Q
Sbjct: 327 PIAEAP----FKFD-MELDDLPKEKLKELIFEETARFQ 359
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 146/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 145
Query: 202 CIGICHRDIKPQNLLVKGEPNV----------------SYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + + Y+ +R+YRAPE++ Y
Sbjct: 146 A-DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 205 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 263
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 264 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 317
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 146/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 149
Query: 202 CIGICHRDIKPQNLLVKGEPNV----------------SYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + + Y+ +R+YRAPE++ Y
Sbjct: 150 A-DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 209 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 267
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 268 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 321
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 107
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 162
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 163 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 221
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 222 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 280
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 281 LAQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 334
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 144 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 261
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 262 LAQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 108
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 163
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 164 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 222
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 223 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 281
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 282 LAQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 335
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKX-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 144 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 261
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 262 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 149
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 150 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 209 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 267
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 268 LAQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 321
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 146/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 99
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 154
Query: 202 CIGICHRDIKPQNLLVKGEPNV----------------SYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + + Y+ +R+YRAPE++ Y
Sbjct: 155 A-DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 213
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 214 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 272
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 273 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 326
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 162/338 (47%), Gaps = 45/338 (13%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV--LQDKRYKNR---ELQIMQMLDHPNIVALKHCF 144
+G G++G+V A VAIKK+ + + Y R E++I+ H NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ T + + ++ + Q + ++ + YQI R L YIH+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA-N 144
Query: 205 ICHRDIKPQNLLVK---------------GEPN-------VSYICSRYYRAPELIFGATE 242
+ HRD+KP NLL+ +P+ Y+ +R+YRAPE++ +
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE----IKCMNPNYT 298
YT +IDIWS GC++AE+L +P+FPG+ +DQL I+ +LG+P++E+ I NY
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYL 264
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR 358
P PW+++F +A+DL+ + ++P+ R +A HP+ ++ DP+
Sbjct: 265 -LSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 322
Query: 359 LPNGRPLPPLFNFKPPELSGIPPETINRLI-PEHARKQ 395
P F F EL +P E + LI E AR Q
Sbjct: 323 PIAEAP----FKFD-MELDDLPKEKLKELIFEETARFQ 355
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 98
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 99 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 153
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 154 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 212
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 213 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 271
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 272 LAQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 325
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 84
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 139
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 140 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 198
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 199 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 257
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 258 LAQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 311
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 144 A-DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 261
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 262 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 162/338 (47%), Gaps = 45/338 (13%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV--LQDKRYKNR---ELQIMQMLDHPNIVALKHCF 144
+G G++G+V A VAIKK+ + + Y R E++I+ H NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ T + + ++ + Q + ++ + YQI R L YIH+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA-N 144
Query: 205 ICHRDIKPQNLLVK---------------GEPN-------VSYICSRYYRAPELIFGATE 242
+ HRD+KP NLL+ +P+ Y+ +R+YRAPE++ +
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE----IKCMNPNYT 298
YT +IDIWS GC++AE+L +P+FPG+ +DQL I+ +LG+P++E+ I NY
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYL 264
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR 358
P PW+++F +A+DL+ + ++P+ R +A HP+ ++ DP+
Sbjct: 265 -LSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 322
Query: 359 LPNGRPLPPLFNFKPPELSGIPPETINRLI-PEHARKQ 395
P F F EL +P E + LI E AR Q
Sbjct: 323 PIAEAP----FKFD-MELDDLPKEKLKELIFEETARFQ 355
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 150
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 151 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQ 209
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 210 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 268
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 269 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 322
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 151/317 (47%), Gaps = 42/317 (13%)
Query: 73 GRNGNSKQKVSYIAEHV---------VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKR 120
R+G +Q+V+ A V VG+G++G V A TG VAIKK+ Q +
Sbjct: 7 ARSGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSEL 66
Query: 121 YKNR---ELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH 177
+ R EL++++ + H N++ L F T D+ + + H
Sbjct: 67 FAKRAYRELRLLKHMRHENVIGLLDVF--TPDETLDDFTDFYLVMPFMGTDLGKLMK--H 122
Query: 178 QRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGEPNV-------------- 223
+++ ++ YQ+ + L YIH GI HRD+KP NL V + +
Sbjct: 123 EKLGEDRIQFLVYQMLKGLRYIH-AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE 181
Query: 224 --SYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV 281
+ +R+YRAPE+I YT +DIWS GC+MAE++ G+ LF G +DQL EI+KV
Sbjct: 182 MXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKV 241
Query: 282 LGTPTREEIKCMNP----NYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLR 337
GTP E ++ + NY + P+++ + + P AV+L+ + R
Sbjct: 242 TGTPPAEFVQRLQSDEAKNYMK-GLPELEKKDFASILTN-ASPLAVNLLEKMLVLDAEQR 299
Query: 338 CTALEACVHPFFDELRD 354
TA EA HP+F+ L D
Sbjct: 300 VTAGEALAHPYFESLHD 316
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 150
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 151 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQ 209
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 210 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 268
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 269 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 322
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 146/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 148
Query: 202 CIGICHRDIKPQNLLVKGEPNV----------------SYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + + Y+ +R+YRAPE++ Y
Sbjct: 149 A-DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 208 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 266
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 267 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 320
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 164/338 (48%), Gaps = 45/338 (13%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV--LQDKRYKNR---ELQIMQMLDHPNIVALKHCF 144
+G G++G+V A VAIKK+ + + Y R E++I+ H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ T + + ++ + Q + ++ + YQI R L YIH+
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA-N 148
Query: 205 ICHRDIKPQNLLVK---------------GEPNVSY-------ICSRYYRAPELIFGATE 242
+ HRD+KP NLL+ +P+ + + +R+YRAPE++ +
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG 208
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPNYT 298
YT +IDIWS GC++AE+L +P+FPG+ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL 268
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR 358
P PW+++F +A+DL+ + ++P+ R +A HP+ ++ DP+
Sbjct: 269 -LSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 326
Query: 359 LPNGRPLPPLFNFKPPELSGIPPETINRLI-PEHARKQ 395
P F F EL +P E + LI E AR Q
Sbjct: 327 PIAEAP----FKFD-MELDDLPKEKLKELIFEETARFQ 359
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 150
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 151 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQ 209
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 210 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 268
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 269 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 322
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 164/338 (48%), Gaps = 45/338 (13%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV--LQDKRYKNR---ELQIMQMLDHPNIVALKHCF 144
+G G++G+V A VAIKK+ + + Y R E++I+ H NI+ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ T + + ++ + Q + ++ + YQI R L YIH+
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA-N 149
Query: 205 ICHRDIKPQNLLVK---------------GEPNVSY-------ICSRYYRAPELIFGATE 242
+ HRD+KP NLL+ +P+ + + +R+YRAPE++ +
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG 209
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPNYT 298
YT +IDIWS GC++AE+L +P+FPG+ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 210 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL 269
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR 358
P PW+++F +A+DL+ + ++P+ R +A HP+ ++ DP+
Sbjct: 270 -LSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 327
Query: 359 LPNGRPLPPLFNFKPPELSGIPPETINRLI-PEHARKQ 395
P F F EL +P E + LI E AR Q
Sbjct: 328 PIAEAP----FKFD-MELDDLPKEKLKELIFEETARFQ 360
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 100
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 155
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 156 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 214
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 215 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 273
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 274 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 327
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 100
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 155
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 156 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 214
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 215 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 273
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 274 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 327
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 149
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 150 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 209 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 267
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 268 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 321
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 149
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 150 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 209 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 267
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 268 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 321
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 100
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 155
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 156 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 214
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 215 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 273
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 274 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 327
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 111
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 166
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 167 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 225
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 226 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 284
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 285 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 338
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 146/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
+G+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 148
Query: 202 CIGICHRDIKPQNLLVKGEPNV----------------SYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + + Y+ +R+YRAPE++ Y
Sbjct: 149 A-DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 208 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 266
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 267 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 320
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 144 A-DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 261
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 262 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 148
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 149 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 208 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 266
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 267 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 320
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 107
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 162
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 163 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 221
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 222 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 280
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 281 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 334
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 150
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 151 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 209
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 210 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 268
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 269 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 322
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 144 A-DIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 261
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 262 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 145
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 146 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 205 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 263
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 264 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 317
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 144 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 261
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 262 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 99
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 154
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 155 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 213
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 214 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 272
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 273 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 326
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 144 A-DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 261
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 262 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 148
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 149 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 208 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 266
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 267 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 320
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 87
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 88 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 142
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 143 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 201
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 202 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 260
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 261 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 314
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 144 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 261
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 262 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 144 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 261
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 262 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 144 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 261
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 262 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 144 A-DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 261
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 262 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 144 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 261
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 262 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 144 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 261
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 262 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 146/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 111
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 166
Query: 202 CIGICHRDIKPQNLLVKGEPNV----------------SYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + + Y+ +R+YRAPE++ Y
Sbjct: 167 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWYRAPEIMLNWMHYNQ 225
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 226 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 284
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 285 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 338
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 108
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 163
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 164 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 222
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 223 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 281
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 282 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 335
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 144 A-DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 261
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 262 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 145
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 146 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 205 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 263
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 264 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 317
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 144 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 261
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 262 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 86
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 87 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 141
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 142 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 200
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 201 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 259
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 260 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 313
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 145
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 146 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 205 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 263
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 264 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 317
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 85
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 140
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 141 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 199
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 200 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 258
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 259 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 312
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 84
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 139
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 140 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 198
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 199 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 257
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 258 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 311
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 85
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 140
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 141 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 199
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 200 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 258
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 259 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 312
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + ++ +R+YRAPE++ Y
Sbjct: 144 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQ 202
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 261
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 262 LAQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + ++ +R+YRAPE++ Y
Sbjct: 144 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQ 202
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 261
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 262 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 84
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 139
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + ++ +R+YRAPE++ Y
Sbjct: 140 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQ 198
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 199 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 257
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 258 LAQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 311
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 144/295 (48%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 84
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + ++ +V+ YQI R L YIH+
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----AKLTDDHVQFLIYQILRGLKYIHS 139
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + Y+ +R+YRAPE++ Y
Sbjct: 140 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 198
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 199 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 257
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 258 LAQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 311
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 144/298 (48%), Gaps = 47/298 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++G VF+AK RET EIVA+K+V D + RE+ +++ L H NIV L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
S DK + + + + + VK + +Q+ + L + H+
Sbjct: 70 LHS--DKKLTLVFEFCD------QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS-R 120
Query: 204 GICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYRAPELIFGATEYT 244
+ HRD+KPQNLL+ G P Y + + +YR P+++FGA Y+
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 245 TAIDIWSTGCVMAELL-LGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFP 303
T+ID+WS GC+ AEL G+PLFPG DQL I ++LGTPT E+ M K P
Sbjct: 181 TSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT------KLP 234
Query: 304 QIKPHPWHKVFQK------RLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 355
KP+P + +L DL+ + +P R +A EA HP+F + P
Sbjct: 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 108
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 163
Query: 202 CIGICHRDIKPQNLLVKGEPNV----------------SYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + + + +R+YRAPE++ Y
Sbjct: 164 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRAPEIMLNWMHYNQ 222
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 223 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 281
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 282 LAQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 335
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 146/294 (49%), Gaps = 40/294 (13%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHC 143
+G GS+GVVF+ + R+TG+IVAIKK L+ K+ RE+++++ L HPN+V L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH--N 201
F + + R + +P VK T+Q +A+ + H N
Sbjct: 71 F--------RRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN 122
Query: 202 CIGICHRDIKPQNLLVKGE----------------PNVSY---ICSRYYRAPELIFGATE 242
CI HRD+KP+N+L+ P+ Y + +R+YR+PEL+ G T+
Sbjct: 123 CI---HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQ 179
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLG--TPTREEIKCMNPNYTEF 300
Y +D+W+ GCV AELL G PL+PG+S VDQL I K LG P +++ N ++
Sbjct: 180 YGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGV 239
Query: 301 KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRD 354
K P + ++ + A+ L+ P R T + HP+F+ +R+
Sbjct: 240 KIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE 293
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 147/305 (48%), Gaps = 36/305 (11%)
Query: 83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-----RELQIMQMLDHPNI 137
+YI +G G++ V++ K + T +VA+K++ + RE+ +++ L H NI
Sbjct: 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI 62
Query: 138 VALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
V L T+K N +H VKL+ +Q+ R LA
Sbjct: 63 VTLHDIIH--TEKSLTLVFEYLDKDLKQYLDDCGNIINMHN------VKLFLFQLLRGLA 114
Query: 198 YIHNCIGICHRDIKPQNLLV--KGE--------------PNVSY---ICSRYYRAPELIF 238
Y H + HRD+KPQNLL+ +GE P +Y + + +YR P+++
Sbjct: 115 YCHRQ-KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILL 173
Query: 239 GATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM--NPN 296
G+T+Y+T ID+W GC+ E+ G+PLFPG + +QL I ++LGTPT E + N
Sbjct: 174 GSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE 233
Query: 297 YTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
+ + +P+ + RL + DL+ + Q+ R +A +A HPFF L +
Sbjct: 234 FKTYNYPKYRAEALLS-HAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERI 292
Query: 357 TRLPN 361
+LP+
Sbjct: 293 HKLPD 297
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 144/295 (48%), Gaps = 37/295 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
VG+G++G V A +TG VA+KK ++ KR REL++++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + + + +N I + Q++ +V+ YQI R L YIH+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 CIGICHRDIKPQNLLVK----------------GEPNVSYICSRYYRAPELIFGATEYTT 245
I HRD+KP NL V + + +R+YRAPE++ Y
Sbjct: 144 A-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRAPEIMLNWMHYNQ 202
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFK 301
+DIWS GC+MAELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-S 261
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
Q+ + VF P AVDL+ + + R TA +A H +F + DP+
Sbjct: 262 LTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 143/298 (47%), Gaps = 47/298 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G++G VF+AK RET EIVA+K+V D + RE+ +++ L H NIV L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
S DK + + + + + VK + +Q+ + L + H+
Sbjct: 70 LHS--DKKLTLVFEFCD------QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS-R 120
Query: 204 GICHRDIKPQNLLVK----------------GEPNVSY---ICSRYYRAPELIFGATEYT 244
+ HRD+KPQNLL+ G P Y + + +YR P+++FGA Y+
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 245 TAIDIWSTGCVMAELL-LGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFP 303
T+ID+WS GC+ AEL +PLFPG DQL I ++LGTPT E+ M K P
Sbjct: 181 TSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT------KLP 234
Query: 304 QIKPHPWHKVFQK------RLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 355
KP+P + +L DL+ + +P R +A EA HP+F + P
Sbjct: 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 142/289 (49%), Gaps = 38/289 (13%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKH 142
+VG GS+G+V + + ++TG IVAIKK L+ K+ RE+++++ L H N+V L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNL-- 89
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
K ++ + + + ++ V+ Y +QI + + H+
Sbjct: 90 --LEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQV----VQKYLFQIINGIGFCHSH 143
Query: 203 IGICHRDIKPQNLLVK-------------------GEPNVSYICSRYYRAPELIFGATEY 243
I HRDIKP+N+LV GE + +R+YRAPEL+ G +Y
Sbjct: 144 -NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKY 202
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGT--PTREEIKCMNPNYTEFK 301
A+D+W+ GC++ E+ +G+PLFPG+S +DQL I+ LG P +E+ NP + +
Sbjct: 203 GKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVR 262
Query: 302 FPQIKP-HPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFF 349
P+IK P + + K L +DL + P+ R E H FF
Sbjct: 263 LPEIKEREPLERRYPK-LSEVVIDLAKKCLHIDPDKRPFCAELLHHDFF 310
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 140/296 (47%), Gaps = 43/296 (14%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-----RELQIMQMLDHPNIVALKHCF 144
+G G++ V++ + TG VA+K+V D RE+ +M+ L H NIV L
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ +R N R + L VK + +Q+ + LA+ H
Sbjct: 73 HTENKLTLVFEFMDNDLKKYMDSRTVGNTPR---GLELNLVKYFQWQLLQGLAFCHEN-K 128
Query: 205 ICHRDIKPQNLLV--KGEPNV-----------------SYICSRYYRAPELIFGATEYTT 245
I HRD+KPQNLL+ +G+ + S + + +YRAP+++ G+ Y+T
Sbjct: 129 ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYST 188
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE------EIKCMNPNYTE 299
+IDIWS GC++AE++ G+PLFPG + +QL I ++GTP ++ NPN
Sbjct: 189 SIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPN--- 245
Query: 300 FKFPQIKPHPWHKVFQKR----LPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDE 351
Q P +V Q L +D + Q +P++R +A +A HP+F E
Sbjct: 246 --IQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE 299
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 143/294 (48%), Gaps = 37/294 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVL----QDKRYKNRELQIMQMLDHPNIVALKHCFF 145
+G G G+VF A + + VAIKK++ Q ++ RE++I++ LDH NIV +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 146 STTDKXXXXXXXXXXXXXXTVNR--IARNYSRIHQRMPLI--YVKLYTYQICRALAYIHN 201
+ + + + + + + + ++ PL+ + +L+ YQ+ R L YIH+
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHS 138
Query: 202 CIGICHRDIKPQNLLVKGE----------------PNVSY-------ICSRYYRAPELIF 238
+ HRD+KP NL + E P+ S+ + +++YR+P L+
Sbjct: 139 A-NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLL 197
Query: 239 GATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQL---VEIIKVLGTPTREEIKCMNP 295
YT AID+W+ GC+ AE+L G+ LF G ++Q+ +E I V+ R+E+ + P
Sbjct: 198 SPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIP 257
Query: 296 NYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFF 349
Y + +PH + EAVD + + +SP R TA EA HP+
Sbjct: 258 VY--IRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYM 309
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 141/312 (45%), Gaps = 49/312 (15%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKN------------RELQI 128
Y + + +GS+G V A G VAIK+V + D R N RE+++
Sbjct: 24 YTVQRFISSGSYGAVC-AGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 129 MQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLI---YV 185
+ HPNI+ L+ F + + ++ IH + +I ++
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQV------IHDQRIVISPQHI 136
Query: 186 KLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGEPNVS------------------YIC 227
+ + Y I L +H G+ HRD+ P N+L+ +++ Y+
Sbjct: 137 QYFMYHILLGLHVLHEA-GVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVT 195
Query: 228 SRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 287
R+YRAPEL+ +T +D+WS GCVMAE+ + LF G + +QL +I++V+GTP
Sbjct: 196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI 255
Query: 288 EEIKCMNP----NYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEA 343
E++ + +Y + W V P A+DL+ + +++P R + +A
Sbjct: 256 EDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTA-DPVALDLIAKMLEFNPQRRISTEQA 314
Query: 344 CVHPFFDELRDP 355
HP+F+ L DP
Sbjct: 315 LRHPYFESLFDP 326
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 141/312 (45%), Gaps = 49/312 (15%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKN------------RELQI 128
Y + + +GS+G V A G VAIK+V + D R N RE+++
Sbjct: 24 YTVQRFISSGSYGAVC-AGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 129 MQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLI---YV 185
+ HPNI+ L+ F + + ++ IH + +I ++
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQV------IHDQRIVISPQHI 136
Query: 186 KLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGEPNVS------------------YIC 227
+ + Y I L +H G+ HRD+ P N+L+ +++ Y+
Sbjct: 137 QYFMYHILLGLHVLHEA-GVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVT 195
Query: 228 SRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 287
R+YRAPEL+ +T +D+WS GCVMAE+ + LF G + +QL +I++V+GTP
Sbjct: 196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI 255
Query: 288 EEIKCMNP----NYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEA 343
E++ + +Y + W V P A+DL+ + +++P R + +A
Sbjct: 256 EDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTA-DPVALDLIAKMLEFNPQRRISTEQA 314
Query: 344 CVHPFFDELRDP 355
HP+F+ L DP
Sbjct: 315 LRHPYFESLFDP 326
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 149/311 (47%), Gaps = 58/311 (18%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M++++H NI+ L +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRI------HQRMPLIYVKLYTYQICRALA 197
F T K + + N S++ H+RM + YQ+ +
Sbjct: 92 F--TPQKSLEEFQDVYI----VMELMDANLSQVIQMELDHERMSYL-----LYQMLVGIK 140
Query: 198 YIHNCIGICHRDIKPQNLLVKGEPNVS------------------YICSRYYRAPELIFG 239
++H+ GI HRD+KP N++VK + + Y+ +RYYRAPE+I G
Sbjct: 141 HLHSA-GIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 240 ATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---N 296
Y +DIWS GC+M E++ G LFPG +DQ ++I+ LGTP+ E +K + P
Sbjct: 200 MG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 297 YTEFKFPQIKPHPWHKVFQKRLPP-----------EAVDLVCRFFQYSPNLRCTALEACV 345
Y E + P+ + + K+F L P +A DL+ + + R + EA
Sbjct: 259 YVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 346 HPFFDELRDPN 356
HP+ + DP+
Sbjct: 318 HPYINVWYDPS 328
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 149/311 (47%), Gaps = 58/311 (18%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M++++H NI+ L +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRI------HQRMPLIYVKLYTYQICRALA 197
F T K + + N S++ H+RM + YQ+ +
Sbjct: 92 F--TPQKSLEEFQDVYI----VMELMDANLSQVIQMELDHERMSYL-----LYQMLCGIK 140
Query: 198 YIHNCIGICHRDIKPQNLLVKGEPNVS------------------YICSRYYRAPELIFG 239
++H+ GI HRD+KP N++VK + + Y+ +RYYRAPE+I G
Sbjct: 141 HLHSA-GIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 240 ATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---N 296
Y +DIWS GC+M E++ G LFPG +DQ ++I+ LGTP+ E +K + P
Sbjct: 200 MG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 297 YTEFKFPQIKPHPWHKVFQKRLPP-----------EAVDLVCRFFQYSPNLRCTALEACV 345
Y E + P+ + + K+F L P +A DL+ + + R + EA
Sbjct: 259 YVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 346 HPFFDELRDPN 356
HP+ + DP+
Sbjct: 318 HPYINVWYDPS 328
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 148/311 (47%), Gaps = 58/311 (18%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M++++H NI+ L +
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRI------HQRMPLIYVKLYTYQICRALA 197
F T K + + N S++ H+RM + YQ+ +
Sbjct: 92 F--TPQKSLEEFQDVYI----VMELMDANLSQVIQMELDHERMSYL-----LYQMLVGIK 140
Query: 198 YIHNCIGICHRDIKPQNLLVKGEPNVS------------------YICSRYYRAPELIFG 239
++H+ GI HRD+KP N++VK + + Y+ +RYYRAPE+I G
Sbjct: 141 HLHSA-GIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 240 ATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---N 296
Y +DIWS G +M E++ G LFPG +DQ ++I+ LGTP+ E +K + P
Sbjct: 200 MG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 297 YTEFKFPQIKPHPWHKVFQKRLPP-----------EAVDLVCRFFQYSPNLRCTALEACV 345
Y E + P+ + + K+F L P +A DL+ + + R + EA
Sbjct: 259 YVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 346 HPFFDELRDPN 356
HP+ + DP+
Sbjct: 318 HPYINVWYDPS 328
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 141/305 (46%), Gaps = 48/305 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M+ ++H NI++L +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 144 FF--STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F T ++ I H+RM + YQ+ + ++H+
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLXQVIQMELD--HERMSYL-----LYQMLXGIKHLHS 144
Query: 202 CIGICHRDIKPQNLLVKGEPNVS------------------YICSRYYRAPELIFGATEY 243
GI HRD+KP N++VK + + Y+ +RYYRAPE+I G Y
Sbjct: 145 A-GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 299
+DIWS GC+M E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 300 ------FKFPQIKPH---PWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFD 350
FP++ P P K +A DL+ + P R + +A HP+ +
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 351 ELRDP 355
DP
Sbjct: 323 VWYDP 327
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 148/311 (47%), Gaps = 58/311 (18%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M+ ++H NI+ L +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRI------HQRMPLIYVKLYTYQICRALA 197
F T K + + N S++ H+RM + YQ+ +
Sbjct: 92 F--TPQKSLEEFQDVYI----VMELMDANLSQVIQMELDHERMSYL-----LYQMLCGIK 140
Query: 198 YIHNCIGICHRDIKPQNLLVKGEPNVS------------------YICSRYYRAPELIFG 239
++H+ GI HRD+KP N++VK + + Y+ +RYYRAPE+I G
Sbjct: 141 HLHSA-GIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 240 ATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---N 296
Y +DIWS GC+M E++ G LFPG +DQ ++I+ LGTP+ E +K + P
Sbjct: 200 MG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 297 YTEFKFPQIKPHPWHKVFQKRLPP-----------EAVDLVCRFFQYSPNLRCTALEACV 345
Y E + P+ + + K+F L P +A DL+ + + R + EA
Sbjct: 259 YVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 346 HPFFDELRDPN 356
HP+ + DP+
Sbjct: 318 HPYINVWYDPS 328
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 141/305 (46%), Gaps = 48/305 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M+ ++H NI++L +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 144 FF--STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F T ++ I H+RM + YQ+ + ++H+
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLXQVIQMELD--HERMSYL-----LYQMLXGIKHLHS 144
Query: 202 CIGICHRDIKPQNLLVKGEPNVS------------------YICSRYYRAPELIFGATEY 243
GI HRD+KP N++VK + + Y+ +RYYRAPE+I G Y
Sbjct: 145 A-GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 299
+DIWS GC+M E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 300 ------FKFPQIKPH---PWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFD 350
FP++ P P K +A DL+ + P R + +A HP+ +
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 351 ELRDP 355
DP
Sbjct: 323 VWYDP 327
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 141/305 (46%), Gaps = 48/305 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M+ ++H NI++L +
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 144 FF--STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F T ++ I H+RM + YQ+ + ++H+
Sbjct: 85 FTPQKTLEEFQDVYLVMELMDANLXQVIQMELD--HERMSYL-----LYQMLXGIKHLHS 137
Query: 202 CIGICHRDIKPQNLLVKGEPNVS------------------YICSRYYRAPELIFGATEY 243
GI HRD+KP N++VK + + Y+ +RYYRAPE+I G Y
Sbjct: 138 A-GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 195
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 299
+DIWS GC+M E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 196 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 255
Query: 300 ------FKFPQIKPH---PWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFD 350
FP++ P P K +A DL+ + P R + +A HP+ +
Sbjct: 256 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315
Query: 351 ELRDP 355
DP
Sbjct: 316 VWYDP 320
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 148/311 (47%), Gaps = 58/311 (18%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M++++H NI+ L +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRI------HQRMPLIYVKLYTYQICRALA 197
F T K + + N S++ H+RM + YQ+ +
Sbjct: 92 F--TPQKSLEEFQDVYI----VMELMDANLSQVIQMELDHERMSYL-----LYQMLVGIK 140
Query: 198 YIHNCIGICHRDIKPQNLLVKGEPNVS------------------YICSRYYRAPELIFG 239
++H+ GI HRD+KP N++VK + + Y+ +RYYRAPE+I G
Sbjct: 141 HLHSA-GIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 240 ATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---N 296
Y +DIWS G +M E++ G LFPG +DQ ++I+ LGTP+ E +K + P
Sbjct: 200 MG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 297 YTEFKFPQIKPHPWHKVFQKRLPP-----------EAVDLVCRFFQYSPNLRCTALEACV 345
Y E + P+ + + K+F L P +A DL+ + + R + EA
Sbjct: 259 YVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 346 HPFFDELRDPN 356
HP+ + DP+
Sbjct: 318 HPYINVWYDPS 328
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 141/305 (46%), Gaps = 48/305 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M+ ++H NI++L +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 144 FF--STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F T ++ I H+RM + YQ+ + ++H+
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLXQVIQMELD--HERMSYL-----LYQMLCGIKHLHS 144
Query: 202 CIGICHRDIKPQNLLVKGEPNVS------------------YICSRYYRAPELIFGATEY 243
GI HRD+KP N++VK + + Y+ +RYYRAPE+I G Y
Sbjct: 145 A-GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 299
+DIWS GC+M E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 300 ------FKFPQIKPH---PWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFD 350
FP++ P P K +A DL+ + P R + +A HP+ +
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 351 ELRDP 355
DP
Sbjct: 323 VWYDP 327
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 148/311 (47%), Gaps = 58/311 (18%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M+ ++H NI+ L +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRI------HQRMPLIYVKLYTYQICRALA 197
F T K + + N S++ H+RM + YQ+ +
Sbjct: 92 F--TPQKSLEEFQDVYI----VMELMDANLSQVIQMELDHERMSYL-----LYQMLCGIK 140
Query: 198 YIHNCIGICHRDIKPQNLLVKGEPNVS------------------YICSRYYRAPELIFG 239
++H+ GI HRD+KP N++VK + + Y+ +RYYRAPE+I G
Sbjct: 141 HLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 240 ATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---N 296
Y +DIWS GC+M E++ G LFPG +DQ ++I+ LGTP+ E +K + P
Sbjct: 200 MG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 297 YTEFKFPQIKPHPWHKVFQKRLPP-----------EAVDLVCRFFQYSPNLRCTALEACV 345
Y E + P+ + + K+F L P +A DL+ + + R + EA
Sbjct: 259 YVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 346 HPFFDELRDPN 356
HP+ + DP+
Sbjct: 318 HPYINVWYDPS 328
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 141/305 (46%), Gaps = 48/305 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M+ ++H NI++L +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 144 FF--STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F T ++ I H+RM + YQ+ + ++H+
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELD--HERMSYL-----LYQMLCGIKHLHS 144
Query: 202 CIGICHRDIKPQNLLVKGEPNVS------------------YICSRYYRAPELIFGATEY 243
GI HRD+KP N++VK + + Y+ +RYYRAPE+I G Y
Sbjct: 145 A-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 299
+DIWS GC+M E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 300 ------FKFPQIKPH---PWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFD 350
FP++ P P K +A DL+ + P R + +A HP+ +
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 351 ELRDP 355
DP
Sbjct: 323 VWYDP 327
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 141/305 (46%), Gaps = 48/305 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M+ ++H NI++L +
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 144 FF--STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F T ++ I H+RM + YQ+ + ++H+
Sbjct: 93 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELD--HERMSYL-----LYQMLCGIKHLHS 145
Query: 202 CIGICHRDIKPQNLLVKGEPNVS------------------YICSRYYRAPELIFGATEY 243
GI HRD+KP N++VK + + Y+ +RYYRAPE+I G Y
Sbjct: 146 A-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 203
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 299
+DIWS GC+M E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 204 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 263
Query: 300 ------FKFPQIKPH---PWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFD 350
FP++ P P K +A DL+ + P R + +A HP+ +
Sbjct: 264 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323
Query: 351 ELRDP 355
DP
Sbjct: 324 VWYDP 328
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 141/305 (46%), Gaps = 48/305 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M+ ++H NI++L +
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 144 FF--STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F T ++ I H+RM + YQ+ + ++H+
Sbjct: 93 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELD--HERMSYL-----LYQMLCGIKHLHS 145
Query: 202 CIGICHRDIKPQNLLVKGEPNVS------------------YICSRYYRAPELIFGATEY 243
GI HRD+KP N++VK + + Y+ +RYYRAPE+I G Y
Sbjct: 146 A-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 203
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 299
+DIWS GC+M E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 204 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 263
Query: 300 ------FKFPQIKPH---PWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFD 350
FP++ P P K +A DL+ + P R + +A HP+ +
Sbjct: 264 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323
Query: 351 ELRDP 355
DP
Sbjct: 324 VWYDP 328
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 141/305 (46%), Gaps = 48/305 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M+ ++H NI++L +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 144 FF--STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F T ++ I H+RM + YQ+ + ++H+
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELD--HERMSYL-----LYQMLCGIKHLHS 144
Query: 202 CIGICHRDIKPQNLLVKGEPNVS------------------YICSRYYRAPELIFGATEY 243
GI HRD+KP N++VK + + Y+ +RYYRAPE+I G Y
Sbjct: 145 A-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 299
+DIWS GC+M E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 300 ------FKFPQIKPH---PWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFD 350
FP++ P P K +A DL+ + P R + +A HP+ +
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 351 ELRDP 355
DP
Sbjct: 323 VWYDP 327
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 141/305 (46%), Gaps = 48/305 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M+ ++H NI++L +
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 90
Query: 144 FF--STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F T ++ I H+RM + YQ+ + ++H+
Sbjct: 91 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELD--HERMSYL-----LYQMLCGIKHLHS 143
Query: 202 CIGICHRDIKPQNLLVKGEPNVS------------------YICSRYYRAPELIFGATEY 243
GI HRD+KP N++VK + + Y+ +RYYRAPE+I G Y
Sbjct: 144 A-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 201
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 299
+DIWS GC+M E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 202 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 261
Query: 300 ------FKFPQIKPH---PWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFD 350
FP++ P P K +A DL+ + P R + +A HP+ +
Sbjct: 262 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 321
Query: 351 ELRDP 355
DP
Sbjct: 322 VWYDP 326
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 141/305 (46%), Gaps = 48/305 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M+ ++H NI++L +
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 144 FF--STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F T ++ I H+RM + YQ+ + ++H+
Sbjct: 86 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELD--HERMSYL-----LYQMLCGIKHLHS 138
Query: 202 CIGICHRDIKPQNLLVKGEPNVS------------------YICSRYYRAPELIFGATEY 243
GI HRD+KP N++VK + + Y+ +RYYRAPE+I G Y
Sbjct: 139 A-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 196
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 299
+DIWS GC+M E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 197 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 256
Query: 300 ------FKFPQIKPH---PWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFD 350
FP++ P P K +A DL+ + P R + +A HP+ +
Sbjct: 257 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316
Query: 351 ELRDP 355
DP
Sbjct: 317 VWYDP 321
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 141/305 (46%), Gaps = 48/305 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M+ ++H NI++L +
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 144 FF--STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F T ++ I H+RM + YQ+ + ++H+
Sbjct: 85 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELD--HERMSYL-----LYQMLCGIKHLHS 137
Query: 202 CIGICHRDIKPQNLLVKGEPNVS------------------YICSRYYRAPELIFGATEY 243
GI HRD+KP N++VK + + Y+ +RYYRAPE+I G Y
Sbjct: 138 A-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 195
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 299
+DIWS GC+M E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 196 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 255
Query: 300 ------FKFPQIKPH---PWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFD 350
FP++ P P K +A DL+ + P R + +A HP+ +
Sbjct: 256 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315
Query: 351 ELRDP 355
DP
Sbjct: 316 VWYDP 320
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 141/305 (46%), Gaps = 48/305 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M+ ++H NI++L +
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 144 FF--STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F T ++ I H+RM + YQ+ + ++H+
Sbjct: 130 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELD--HERMSYL-----LYQMLCGIKHLHS 182
Query: 202 CIGICHRDIKPQNLLVKGEPNVS------------------YICSRYYRAPELIFGATEY 243
GI HRD+KP N++VK + + Y+ +RYYRAPE+I G Y
Sbjct: 183 A-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 240
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 299
+DIWS GC+M E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 241 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 300
Query: 300 ------FKFPQIKPH---PWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFD 350
FP++ P P K +A DL+ + P R + +A HP+ +
Sbjct: 301 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360
Query: 351 ELRDP 355
DP
Sbjct: 361 VWYDP 365
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 141/305 (46%), Gaps = 48/305 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M+ ++H NI++L +
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 144 FF--STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F T ++ I H+RM + YQ+ + ++H+
Sbjct: 86 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELD--HERMSYL-----LYQMLCGIKHLHS 138
Query: 202 CIGICHRDIKPQNLLVKGEPNVS------------------YICSRYYRAPELIFGATEY 243
GI HRD+KP N++VK + + Y+ +RYYRAPE+I G Y
Sbjct: 139 A-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 196
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 299
+DIWS GC+M E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 197 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 256
Query: 300 ------FKFPQIKPH---PWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFD 350
FP++ P P K +A DL+ + P R + +A HP+ +
Sbjct: 257 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316
Query: 351 ELRDP 355
DP
Sbjct: 317 VWYDP 321
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 50/307 (16%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M+ ++H NI+ L +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIAR--NYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F T K + + H+RM + YQ+ + ++H+
Sbjct: 92 F--TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL-----LYQMLCGIKHLHS 144
Query: 202 CIGICHRDIKPQNLLVKGEPNVS------------------YICSRYYRAPELIFGATEY 243
GI HRD+KP N++VK + + Y+ +RYYRAPE+I G Y
Sbjct: 145 A-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 300
+DIWS GC+M E++ G LFPG +DQ ++I+ LGTP+ E +K + P Y E
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 301 KFPQIKPHPWHKVFQKRLPP-----------EAVDLVCRFFQYSPNLRCTALEACVHPFF 349
+ P+ + + K+F L P +A DL+ + + R + EA HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 350 DELRDPN 356
+ DP+
Sbjct: 322 NVWYDPS 328
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 141/305 (46%), Gaps = 48/305 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M+ ++H NI++L +
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 144 FF--STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F T ++ I H+RM + YQ+ + ++H+
Sbjct: 130 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELD--HERMSYL-----LYQMLCGIKHLHS 182
Query: 202 CIGICHRDIKPQNLLVKGEPNVS------------------YICSRYYRAPELIFGATEY 243
GI HRD+KP N++VK + + Y+ +RYYRAPE+I G Y
Sbjct: 183 A-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 240
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 299
+DIWS GC+M E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 241 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 300
Query: 300 ------FKFPQIKPH---PWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFD 350
FP++ P P K +A DL+ + P R + +A HP+ +
Sbjct: 301 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360
Query: 351 ELRDP 355
DP
Sbjct: 361 VWYDP 365
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 139/300 (46%), Gaps = 48/300 (16%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M+ ++H NI++L +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 144 FF--STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F T ++ I H+RM + YQ+ + ++H+
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELD--HERMSYL-----LYQMLCGIKHLHS 144
Query: 202 CIGICHRDIKPQNLLVKGEPNVS------------------YICSRYYRAPELIFGATEY 243
GI HRD+KP N++VK + + Y+ +RYYRAPE+I G Y
Sbjct: 145 A-GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 299
+DIWS GC+M E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 300 ------FKFPQIKPH---PWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFD 350
FP++ P P K +A DL+ + P R + +A HP+ +
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 143/307 (46%), Gaps = 50/307 (16%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M+ ++H NI+ L +
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 92
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIAR--NYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F T K + + H+RM + YQ+ + ++H+
Sbjct: 93 F--TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL-----LYQMLCGIKHLHS 145
Query: 202 CIGICHRDIKPQNLLVKGEPNVS------------------YICSRYYRAPELIFGATEY 243
GI HRD+KP N++VK + + Y+ +RYYRAPE+I G Y
Sbjct: 146 A-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 203
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 300
+DIWS GC+M E++ G LFPG +DQ ++I+ LGTP E +K + P Y E
Sbjct: 204 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN 263
Query: 301 KFPQIKPHPWHKVFQKRLPP-----------EAVDLVCRFFQYSPNLRCTALEACVHPFF 349
+ P+ + + K+F L P +A DL+ + + R + EA HP+
Sbjct: 264 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 322
Query: 350 DELRDPN 356
+ DP+
Sbjct: 323 NVWYDPS 329
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 141/305 (46%), Gaps = 48/305 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A G VA+KK+ Q++ + R EL +++ ++H NI++L +
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 91
Query: 144 FF--STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F T ++ I H+RM + YQ+ + ++H+
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIHMELD--HERMSYL-----LYQMLCGIKHLHS 144
Query: 202 CIGICHRDIKPQNLLVKGEPNVS------------------YICSRYYRAPELIFGATEY 243
GI HRD+KP N++VK + + Y+ +RYYRAPE+I G Y
Sbjct: 145 A-GIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 299
+DIWS GC+M EL+ G +F G +DQ ++I+ LGTP+ E + + P NY E
Sbjct: 203 AANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVEN 262
Query: 300 ------FKFPQIKPH---PWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFD 350
KF ++ P P K +A DL+ + P+ R + EA HP+
Sbjct: 263 RPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYIT 322
Query: 351 ELRDP 355
DP
Sbjct: 323 VWYDP 327
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 143/307 (46%), Gaps = 50/307 (16%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M+ ++H NI+ L +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIAR--NYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F T K + + H+RM + YQ+ + ++H+
Sbjct: 92 F--TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL-----LYQMLCGIKHLHS 144
Query: 202 CIGICHRDIKPQNLLVKGEPNVS------------------YICSRYYRAPELIFGATEY 243
GI HRD+KP N++VK + + Y+ +RYYRAPE+I G Y
Sbjct: 145 A-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 300
+DIWS GC+M E++ G LFPG +DQ ++I+ LGTP E +K + P Y E
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN 262
Query: 301 KFPQIKPHPWHKVFQKRLPP-----------EAVDLVCRFFQYSPNLRCTALEACVHPFF 349
+ P+ + + K+F L P +A DL+ + + R + EA HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 350 DELRDPN 356
+ DP+
Sbjct: 322 NVWYDPS 328
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 143/307 (46%), Gaps = 50/307 (16%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M+ ++H NI+ L +
Sbjct: 34 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 93
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIAR--NYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F T K + + H+RM + YQ+ + ++H+
Sbjct: 94 F--TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL-----LYQMLCGIKHLHS 146
Query: 202 CIGICHRDIKPQNLLVKGEPN------------------VSYICSRYYRAPELIFGATEY 243
GI HRD+KP N++VK + V ++ +RYYRAPE+I G Y
Sbjct: 147 A-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMG-Y 204
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 300
+DIWS GC+M E++ G LFPG +DQ ++I+ LGTP E +K + P Y E
Sbjct: 205 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN 264
Query: 301 KFPQIKPHPWHKVFQKRLPP-----------EAVDLVCRFFQYSPNLRCTALEACVHPFF 349
+ P+ + + K+F L P +A DL+ + + R + EA HP+
Sbjct: 265 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 323
Query: 350 DELRDPN 356
+ DP+
Sbjct: 324 NVWYDPS 330
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 140/305 (45%), Gaps = 48/305 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A G VA+KK+ Q++ + R EL +++ ++H NI++L +
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 89
Query: 144 FF--STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F T ++ I H+RM + YQ+ + ++H+
Sbjct: 90 FTPQKTLEEFQDVYLVMELMDANLCQVIHMELD--HERMSYL-----LYQMLCGIKHLHS 142
Query: 202 CIGICHRDIKPQNLLVKGEPNVS------------------YICSRYYRAPELIFGATEY 243
GI HRD+KP N++VK + + Y+ +RYYRAPE+I G Y
Sbjct: 143 A-GIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMG-Y 200
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 299
+DIWS GC+M EL+ G +F G +DQ ++I+ LGTP+ E + + P NY E
Sbjct: 201 KENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVEN 260
Query: 300 ------FKFPQIKPH---PWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFD 350
F ++ P P K +A DL+ + P+ R + EA HP+
Sbjct: 261 RPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYIT 320
Query: 351 ELRDP 355
DP
Sbjct: 321 VWYDP 325
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 156/397 (39%), Gaps = 96/397 (24%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ------DKRYKNRELQIMQMLDHPNI 137
Y H++GTGS+G V +A + +VAIKK+L+ D + RE+ I+ L+H ++
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHV 114
Query: 138 VALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
V + + ++ R + + +++K Y + +
Sbjct: 115 VKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTE----LHIKTLLYNLLVGVK 170
Query: 198 YIHNCIGICHRDIKPQNLLVKGEPNV---------------------------------- 223
Y+H+ GI HRD+KP N LV + +V
Sbjct: 171 YVHSA-GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVT 229
Query: 224 ------------SYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLL---------- 261
++ +R+YRAPELI YT AID+WS GC+ AELL
Sbjct: 230 FPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHA 289
Query: 262 -GQPLFPGES--------------------GVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
PLFPG S DQL I +LGTP+ E+I+ + +
Sbjct: 290 DRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAK- 348
Query: 301 KFPQIKPHPWHKVFQKRLPPEAVD---LVCRFFQYSPNLRCTALEACVHPFFDELR---- 353
++ +I P +R P + D L+ R ++PN R T E HPFF E+R
Sbjct: 349 RYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIAEV 408
Query: 354 DPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPE 390
+ N P N P+L + I R PE
Sbjct: 409 ETNATEKVRLPFNDWMNMDEPQLRYAFVKEIQRYHPE 445
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 142/307 (46%), Gaps = 50/307 (16%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M+ ++H NI+ L +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIAR--NYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F T K + + H+RM + YQ+ + ++H+
Sbjct: 92 F--TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL-----LYQMLCGIKHLHS 144
Query: 202 CIGICHRDIKPQNLLVKGEPNVSY------------------ICSRYYRAPELIFGATEY 243
GI HRD+KP N++VK + + + +RYYRAPE+I G Y
Sbjct: 145 A-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMG-Y 202
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 300
+DIWS GC+M E++ G LFPG +DQ ++I+ LGTP E +K + P Y E
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN 262
Query: 301 KFPQIKPHPWHKVFQKRLPP-----------EAVDLVCRFFQYSPNLRCTALEACVHPFF 349
+ P+ + + K+F L P +A DL+ + + R + EA HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 350 DELRDPN 356
+ DP+
Sbjct: 322 NVWYDPS 328
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 143/307 (46%), Gaps = 50/307 (16%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M+ ++H NI+ L +
Sbjct: 37 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 96
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIAR--NYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F T K + + H+RM + YQ+ + ++H+
Sbjct: 97 F--TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL-----LYQMLCGIKHLHS 149
Query: 202 CIGICHRDIKPQNLLVKGEPNVS------------------YICSRYYRAPELIFGATEY 243
GI HRD+KP N++VK + + Y+ +RYYRAPE+I G Y
Sbjct: 150 A-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 207
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 300
+D+WS GC+M E++ + LFPG +DQ ++I+ LGTP E +K + P Y E
Sbjct: 208 KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN 267
Query: 301 KFPQIKPHPWHKVFQKRLPP-----------EAVDLVCRFFQYSPNLRCTALEACVHPFF 349
+ P+ + + K+F L P +A DL+ + + R + EA HP+
Sbjct: 268 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 326
Query: 350 DELRDPN 356
+ DP+
Sbjct: 327 NVWYDPS 333
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 133/291 (45%), Gaps = 42/291 (14%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-NRELQIMQML-DHPNIVALKHCFFST 147
+G G + VF+A E V +K + K+ K RE++I++ L PNI+ L
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRGGPNIITL------- 97
Query: 148 TDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGICH 207
D VN ++ +++Q + ++ Y Y+I +AL Y H +GI H
Sbjct: 98 ADIVKDPVSRTPALVFEHVNNT--DFKQLYQTLTDYDIRFYMYEILKALDYCH-SMGIMH 154
Query: 208 RDIKPQNLLVKGE----------------PNVSY---ICSRYYRAPELIFGATEYTTAID 248
RD+KP N+++ E P Y + SRY++ PEL+ Y ++D
Sbjct: 155 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 214
Query: 249 IWSTGCVMAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKF 302
+WS GC++A ++ +P F G DQLV I KVLGT + ++P + +
Sbjct: 215 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-L 273
Query: 303 PQIKPHPW----HKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFF 349
+ W H Q + PEA+D + + +Y R TA EA HP+F
Sbjct: 274 GRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 143/307 (46%), Gaps = 50/307 (16%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M+ ++H NI+ L +
Sbjct: 26 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 85
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIAR--NYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F T K + + H+RM + YQ+ + ++H+
Sbjct: 86 F--TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL-----LYQMLCGIKHLHS 138
Query: 202 CIGICHRDIKPQNLLVKGEPNVS------------------YICSRYYRAPELIFGATEY 243
GI HRD+KP N++VK + + Y+ +RYYRAPE+I G Y
Sbjct: 139 A-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 196
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 300
+D+WS GC+M E++ + LFPG +DQ ++I+ LGTP E +K + P Y E
Sbjct: 197 KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN 256
Query: 301 KFPQIKPHPWHKVFQKRLPP-----------EAVDLVCRFFQYSPNLRCTALEACVHPFF 349
+ P+ + + K+F L P +A DL+ + + R + EA HP+
Sbjct: 257 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 315
Query: 350 DELRDPN 356
+ DP+
Sbjct: 316 NVWYDPS 322
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 41/203 (20%)
Query: 185 VKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGE----------------PNVSY--- 225
++ Y Y++ +AL Y H+ GI HRD+KP N+++ E P Y
Sbjct: 148 IRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 206
Query: 226 ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLL-GQPLFPGESGVDQLVEIIKVLGT 284
+ SRY++ PEL+ +Y ++D+WS GC+ A ++ +P F G DQLV+I KVLGT
Sbjct: 207 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 266
Query: 285 PTREEIKCMNPNYTEFKF---PQIKP-------HPWHKVF----QKRLPPEAVDLVCRFF 330
+N +++ PQ++ PW K Q + PEA+D + +
Sbjct: 267 ------DGLNAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 320
Query: 331 QYSPNLRCTALEACVHPFFDELR 353
+Y R TALEA HP+F ++R
Sbjct: 321 RYDHQERLTALEAMTHPYFQQVR 343
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 139/303 (45%), Gaps = 65/303 (21%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALK-- 141
+G G++G V++A T E VAIK++ + + RE+ +++ L H NI+ LK
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 142 -------HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICR 194
H F + + Y + + + +K + YQ+
Sbjct: 102 IHHNHRLHLIFEYAENDL------------------KKYMDKNPDVSMRVIKSFLYQLIN 143
Query: 195 ALAYIHN--CIGICHRDIKPQNLLVK---------------------GEPNVSY---ICS 228
+ + H+ C+ HRD+KPQNLL+ G P + I +
Sbjct: 144 GVNFCHSRRCL---HRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIIT 200
Query: 229 RYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 288
+YR PE++ G+ Y+T++DIWS C+ AE+L+ PLFPG+S +DQL +I +VLG P
Sbjct: 201 LWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDT 260
Query: 289 EIKCMN--PNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVH 346
+ P++ + FP+ + +V L E +DL+ + P R +A A H
Sbjct: 261 TWPGVTALPDWKQ-SFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319
Query: 347 PFF 349
P+F
Sbjct: 320 PYF 322
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 141/304 (46%), Gaps = 38/304 (12%)
Query: 78 SKQKVSYIAEHVVGTGSFGVVFQAK-CRETGEIVAIKKVLQDKRYKN------RELQIMQ 130
+ Q+ +AE +G G++G VF+A+ + G VA+K+V + RE+ +++
Sbjct: 9 ADQQYECVAE--IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLR 66
Query: 131 ML---DHPNIVAL-KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVK 186
L +HPN+V L C S TD+ + + +P +K
Sbjct: 67 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV---PEPGVPTETIK 123
Query: 187 LYTYQICRALAYIHNCIGICHRDIKPQNLLVKGEPNV------------------SYICS 228
+Q+ R L ++H+ + HRD+KPQN+LV + S + +
Sbjct: 124 DMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVT 182
Query: 229 RYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 288
+YRAPE++ ++ Y T +D+WS GC+ AE+ +PLF G S VDQL +I+ V+G P E
Sbjct: 183 LWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 241
Query: 289 EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ + F P K F + DL+ + ++P R +A A HP+
Sbjct: 242 DWP-RDVALPRQAFHSKSAQPIEK-FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299
Query: 349 FDEL 352
F +L
Sbjct: 300 FQDL 303
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 41/203 (20%)
Query: 185 VKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGE----------------PNVSY--- 225
++ Y Y++ +AL Y H+ GI HRD+KP N+++ E P Y
Sbjct: 128 IRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 186
Query: 226 ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLL-GQPLFPGESGVDQLVEIIKVLGT 284
+ SRY++ PEL+ +Y ++D+WS GC+ A ++ +P F G DQLV+I KVLGT
Sbjct: 187 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 246
Query: 285 PTREEIKCMNPNYTEFKF---PQIKP-------HPWHKVF----QKRLPPEAVDLVCRFF 330
+N +++ PQ++ PW K Q + PEA+D + +
Sbjct: 247 ------DGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 300
Query: 331 QYSPNLRCTALEACVHPFFDELR 353
+Y R TALEA HP+F ++R
Sbjct: 301 RYDHQERLTALEAMTHPYFQQVR 323
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 41/203 (20%)
Query: 185 VKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGE----------------PNVSY--- 225
++ Y Y++ +AL Y H+ GI HRD+KP N+++ E P Y
Sbjct: 127 IRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 226 ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLL-GQPLFPGESGVDQLVEIIKVLGT 284
+ SRY++ PEL+ +Y ++D+WS GC+ A ++ +P F G DQLV+I KVLGT
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 285 PTREEIKCMNPNYTEFKF---PQIKP-------HPWHKVF----QKRLPPEAVDLVCRFF 330
+N +++ PQ++ PW K Q + PEA+D + +
Sbjct: 246 ------DGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 299
Query: 331 QYSPNLRCTALEACVHPFFDELR 353
+Y R TALEA HP+F ++R
Sbjct: 300 RYDHQERLTALEAMTHPYFQQVR 322
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 41/203 (20%)
Query: 185 VKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGE----------------PNVSY--- 225
++ Y Y++ +AL Y H+ GI HRD+KP N+++ E P Y
Sbjct: 127 IRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 226 ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLL-GQPLFPGESGVDQLVEIIKVLGT 284
+ SRY++ PEL+ +Y ++D+WS GC+ A ++ +P F G DQLV+I KVLGT
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 285 PTREEIKCMNPNYTEFKF---PQIKP-------HPWHKVF----QKRLPPEAVDLVCRFF 330
+N +++ PQ++ PW K Q + PEA+D + +
Sbjct: 246 ------DGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 299
Query: 331 QYSPNLRCTALEACVHPFFDELR 353
+Y R TALEA HP+F ++R
Sbjct: 300 RYDHQERLTALEAMTHPYFQQVR 322
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 141/304 (46%), Gaps = 38/304 (12%)
Query: 78 SKQKVSYIAEHVVGTGSFGVVFQAK-CRETGEIVAIKKVLQDKRYKN------RELQIMQ 130
+ Q+ +AE +G G++G VF+A+ + G VA+K+V + RE+ +++
Sbjct: 9 ADQQYECVAE--IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLR 66
Query: 131 ML---DHPNIVAL-KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVK 186
L +HPN+V L C S TD+ + + +P +K
Sbjct: 67 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV---PEPGVPTETIK 123
Query: 187 LYTYQICRALAYIHNCIGICHRDIKPQNLLVKGEPNV------------------SYICS 228
+Q+ R L ++H+ + HRD+KPQN+LV + S + +
Sbjct: 124 DMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVT 182
Query: 229 RYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 288
+YRAPE++ ++ Y T +D+WS GC+ AE+ +PLF G S VDQL +I+ V+G P E
Sbjct: 183 LWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 241
Query: 289 EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ + F P K F + DL+ + ++P R +A A HP+
Sbjct: 242 DWP-RDVALPRQAFHSKSAQPIEK-FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299
Query: 349 FDEL 352
F +L
Sbjct: 300 FQDL 303
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 41/203 (20%)
Query: 185 VKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGE----------------PNVSY--- 225
++ Y Y++ +AL Y H+ GI HRD+KP N+++ E P Y
Sbjct: 127 IRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 226 ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLL-GQPLFPGESGVDQLVEIIKVLGT 284
+ SRY++ PEL+ +Y ++D+WS GC+ A ++ +P F G DQLV+I KVLGT
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 285 PTREEIKCMNPNYTEFKF---PQIKP-------HPWHKVF----QKRLPPEAVDLVCRFF 330
+N +++ PQ++ PW K Q + PEA+D + +
Sbjct: 246 ------DGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 299
Query: 331 QYSPNLRCTALEACVHPFFDELR 353
+Y R TALEA HP+F ++R
Sbjct: 300 RYDHQERLTALEAMTHPYFQQVR 322
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 41/203 (20%)
Query: 185 VKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGE----------------PNVSY--- 225
++ Y Y++ +AL Y H+ GI HRD+KP N+++ E P Y
Sbjct: 127 IRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 226 ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLL-GQPLFPGESGVDQLVEIIKVLGT 284
+ SRY++ PEL+ +Y ++D+WS GC+ A ++ +P F G DQLV+I KVLGT
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 285 PTREEIKCMNPNYTEFKF---PQIKP-------HPWHKVF----QKRLPPEAVDLVCRFF 330
+N +++ PQ++ PW K Q + PEA+D + +
Sbjct: 246 ------DGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 299
Query: 331 QYSPNLRCTALEACVHPFFDELR 353
+Y R TALEA HP+F ++R
Sbjct: 300 RYDHQERLTALEAMTHPYFQQVR 322
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 41/203 (20%)
Query: 185 VKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGE----------------PNVSY--- 225
++ Y Y++ +AL Y H+ GI HRD+KP N+++ E P Y
Sbjct: 128 IRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 186
Query: 226 ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLL-GQPLFPGESGVDQLVEIIKVLGT 284
+ SRY++ PEL+ +Y ++D+WS GC+ A ++ +P F G DQLV+I KVLGT
Sbjct: 187 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 246
Query: 285 PTREEIKCMNPNYTEFKF---PQIKP-------HPWHKVF----QKRLPPEAVDLVCRFF 330
+N +++ PQ++ PW K Q + PEA+D + +
Sbjct: 247 DG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 300
Query: 331 QYSPNLRCTALEACVHPFFDELR 353
+Y R TALEA HP+F ++R
Sbjct: 301 RYDHQERLTALEAMTHPYFQQVR 323
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 142/307 (46%), Gaps = 50/307 (16%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M+ ++H NI+ L +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIAR--NYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F T K + + H+RM + YQ+ + ++H+
Sbjct: 92 F--TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL-----LYQMLCGIKHLHS 144
Query: 202 CIGICHRDIKPQNLLVKGEPNVSY------------------ICSRYYRAPELIFGATEY 243
GI HRD+KP N++VK + + + +RYYRAPE+I G Y
Sbjct: 145 A-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMG-Y 202
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 300
+DIWS GC+M E++ + LFPG +DQ ++I+ LGTP +K + P NY E
Sbjct: 203 KENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYVEN 262
Query: 301 KFPQIKPHPWHKVFQKRLPP-----------EAVDLVCRFFQYSPNLRCTALEACVHPFF 349
+ P+ + + K+F L P +A DL+ + + R + EA HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 350 DELRDPN 356
+ DP+
Sbjct: 322 NVWYDPS 328
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 41/203 (20%)
Query: 185 VKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGE----------------PNVSY--- 225
++ Y Y++ +AL Y H+ GI HRD+KP N+++ E P Y
Sbjct: 129 IRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 187
Query: 226 ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLL-GQPLFPGESGVDQLVEIIKVLGT 284
+ SRY++ PEL+ +Y ++D+WS GC+ A ++ +P F G DQLV+I KVLGT
Sbjct: 188 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 247
Query: 285 PTREEIKCMNPNYTEFKF---PQIKP-------HPWHKVF----QKRLPPEAVDLVCRFF 330
+N +++ PQ++ PW K Q + PEA+D + +
Sbjct: 248 DG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 301
Query: 331 QYSPNLRCTALEACVHPFFDELR 353
+Y R TALEA HP+F ++R
Sbjct: 302 RYDHQERLTALEAMTHPYFQQVR 324
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 41/203 (20%)
Query: 185 VKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGE----------------PNVSY--- 225
++ Y Y++ +AL Y H+ GI HRD+KP N+++ E P Y
Sbjct: 127 IRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 226 ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLL-GQPLFPGESGVDQLVEIIKVLGT 284
+ SRY++ PEL+ +Y ++D+WS GC+ A ++ +P F G DQLV+I KVLGT
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 285 PTREEIKCMNPNYTEFKF---PQIKP-------HPWHKVF----QKRLPPEAVDLVCRFF 330
+N +++ PQ++ PW K Q + PEA+D + +
Sbjct: 246 DG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 299
Query: 331 QYSPNLRCTALEACVHPFFDELR 353
+Y R TALEA HP+F ++R
Sbjct: 300 RYDHQERLTALEAMTHPYFQQVR 322
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 41/203 (20%)
Query: 185 VKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGE----------------PNVSY--- 225
++ Y Y++ +AL Y H+ GI HRD+KP N+++ E P Y
Sbjct: 127 IRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 226 ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLL-GQPLFPGESGVDQLVEIIKVLGT 284
+ SRY++ PEL+ +Y ++D+WS GC+ A ++ +P F G DQLV+I KVLGT
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 285 PTREEIKCMNPNYTEFKF---PQIKP-------HPWHKVF----QKRLPPEAVDLVCRFF 330
+N +++ PQ++ PW K Q + PEA+D + +
Sbjct: 246 DG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 299
Query: 331 QYSPNLRCTALEACVHPFFDELR 353
+Y R TALEA HP+F ++R
Sbjct: 300 RYDHQERLTALEAMTHPYFQQVR 322
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 142/307 (46%), Gaps = 50/307 (16%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR---ELQIMQMLDHPNIVALKHC 143
+G+G+ G+V A VAIKK+ Q++ + R EL +M+ ++H NI+ L +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIAR--NYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F T K + + H+RM + YQ+ + ++H+
Sbjct: 92 F--TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL-----LYQMLCGIKHLHS 144
Query: 202 CIGICHRDIKPQNLLVKGEPNVSY------------------ICSRYYRAPELIFGATEY 243
GI HRD+KP N++VK + + + +RYYRAPE+I G Y
Sbjct: 145 A-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMG-Y 202
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 300
+D+WS GC+M E++ + LFPG +DQ ++I+ LGTP E +K + P Y E
Sbjct: 203 KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN 262
Query: 301 KFPQIKPHPWHKVFQKRLPP-----------EAVDLVCRFFQYSPNLRCTALEACVHPFF 349
+ P+ + + K+F L P +A DL+ + + R + EA HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 350 DELRDPN 356
+ DP+
Sbjct: 322 NVWYDPS 328
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 139/301 (46%), Gaps = 38/301 (12%)
Query: 78 SKQKVSYIAEHVVGTGSFGVVFQAK-CRETGEIVAIKKVLQDKRYKN------RELQIMQ 130
+ Q+ +AE +G G++G VF+A+ + G VA+K+V + RE+ +++
Sbjct: 9 ADQQYECVAE--IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLR 66
Query: 131 ML---DHPNIVAL-KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVK 186
L +HPN+V L C S TD+ + + +P +K
Sbjct: 67 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV---PEPGVPTETIK 123
Query: 187 LYTYQICRALAYIHNCIGICHRDIKPQNLLVKGEPNV------------------SYICS 228
+Q+ R L ++H+ + HRD+KPQN+LV + S + +
Sbjct: 124 DMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVT 182
Query: 229 RYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 288
+YRAPE++ ++ Y T +D+WS GC+ AE+ +PLF G S VDQL +I+ V+G P E
Sbjct: 183 LWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 241
Query: 289 EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ + F P K F + DL+ + ++P R +A A HP+
Sbjct: 242 DWP-RDVALPRQAFHSKSAQPIEK-FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299
Query: 349 F 349
F
Sbjct: 300 F 300
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 150/353 (42%), Gaps = 92/353 (26%)
Query: 83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV------LQDKRYKNRELQIMQMLDHPN 136
+YI +H++G GS+G V+ A + T + VAIKKV L D + RE+ I+ L
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 86
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLI----YVKLYTYQI 192
I+ L V IA + + + P+ ++K Y +
Sbjct: 87 IIRLYDLIIPDD--------LLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNL 138
Query: 193 CRALAYIHNCIGICHRDIKPQNLLVKGEPNV----------------------------- 223
+IH GI HRD+KP N L+ + +V
Sbjct: 139 LLGENFIHES-GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEP 197
Query: 224 ------------SYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELL-LGQ------- 263
S++ +R+YRAPELI YT +IDIWSTGC+ AELL + Q
Sbjct: 198 GPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPT 257
Query: 264 ---PLFPG-----------------ESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFP 303
PLFPG +S DQL I ++GTPT +++K +N K+
Sbjct: 258 NRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEV-IKYI 316
Query: 304 QIKPHPWHKVFQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELR 353
++ PH +++ P + ++L+ +++PN R T +A HP+ ++R
Sbjct: 317 KLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVR 369
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 31/207 (14%)
Query: 172 NYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGE----------- 220
++ +++Q + ++ Y Y+I +AL Y H +GI HRD+KP N+L+ E
Sbjct: 120 DFKQLYQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVLIDHEHRKLRLIDWGL 178
Query: 221 -----PNVSY---ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLL-GQPLFPGESG 271
P Y + SRY++ PEL+ Y ++D+WS GC++A ++ +P F G
Sbjct: 179 AEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 238
Query: 272 VDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKFPQIKPHPW----HKVFQKRLPPEA 322
DQLV I KVLGT + ++P + + + W H Q + PEA
Sbjct: 239 YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEA 297
Query: 323 VDLVCRFFQYSPNLRCTALEACVHPFF 349
+D + + +Y R TA EA HP+F
Sbjct: 298 LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 31/207 (14%)
Query: 172 NYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGE----------- 220
++ +++Q + ++ Y Y+I +AL Y H +GI HRD+KP N+++ E
Sbjct: 120 DFKQLYQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
Query: 221 -----PNVSY---ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLL-GQPLFPGESG 271
P Y + SRY++ PEL+ Y ++D+WS GC++A ++ +P F G
Sbjct: 179 AEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 238
Query: 272 VDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKFPQIKPHPW----HKVFQKRLPPEA 322
DQLV I KVLGT + ++P + + + W H Q + PEA
Sbjct: 239 YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEA 297
Query: 323 VDLVCRFFQYSPNLRCTALEACVHPFF 349
+D + + +Y R TA EA HP+F
Sbjct: 298 LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 31/207 (14%)
Query: 172 NYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGE----------- 220
++ +++Q + ++ Y Y+I +AL Y H +GI HRD+KP N+++ E
Sbjct: 120 DFKQLYQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
Query: 221 -----PNVSY---ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLL-GQPLFPGESG 271
P Y + SRY++ PEL+ Y ++D+WS GC++A ++ +P F G
Sbjct: 179 AEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 238
Query: 272 VDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKFPQIKPHPW----HKVFQKRLPPEA 322
DQLV I KVLGT + ++P + + + W H Q + PEA
Sbjct: 239 YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEA 297
Query: 323 VDLVCRFFQYSPNLRCTALEACVHPFF 349
+D + + +Y R TA EA HP+F
Sbjct: 298 LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 31/207 (14%)
Query: 172 NYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGE----------- 220
++ +++Q + ++ Y Y+I +AL Y H +GI HRD+KP N+++ E
Sbjct: 120 DFKQLYQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
Query: 221 -----PNVSY---ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLL-GQPLFPGESG 271
P Y + SRY++ PEL+ Y ++D+WS GC++A ++ +P F G
Sbjct: 179 AEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 238
Query: 272 VDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKFPQIKPHPW----HKVFQKRLPPEA 322
DQLV I KVLGT + ++P + + + W H Q + PEA
Sbjct: 239 YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEA 297
Query: 323 VDLVCRFFQYSPNLRCTALEACVHPFF 349
+D + + +Y R TA EA HP+F
Sbjct: 298 LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 31/207 (14%)
Query: 172 NYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGE----------- 220
++ +++Q + ++ Y Y+I +AL Y H +GI HRD+KP N+++ E
Sbjct: 120 DFKQLYQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
Query: 221 -----PNVSY---ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLL-GQPLFPGESG 271
P Y + SRY++ PEL+ Y ++D+WS GC++A ++ +P F G
Sbjct: 179 AEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 238
Query: 272 VDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKFPQIKPHPW----HKVFQKRLPPEA 322
DQLV I KVLGT + ++P + + + W H Q + PEA
Sbjct: 239 YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEA 297
Query: 323 VDLVCRFFQYSPNLRCTALEACVHPFF 349
+D + + +Y R TA EA HP+F
Sbjct: 298 LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 31/207 (14%)
Query: 172 NYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGE----------- 220
++ +++Q + ++ Y Y+I +AL Y H +GI HRD+KP N+++ E
Sbjct: 120 DFKQLYQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
Query: 221 -----PNVSY---ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLL-GQPLFPGESG 271
P Y + SRY++ PEL+ Y ++D+WS GC++A ++ +P F G
Sbjct: 179 AEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 238
Query: 272 VDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKFPQIKPHPW----HKVFQKRLPPEA 322
DQLV I KVLGT + ++P + + + W H Q + PEA
Sbjct: 239 YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEA 297
Query: 323 VDLVCRFFQYSPNLRCTALEACVHPFF 349
+D + + +Y R TA EA HP+F
Sbjct: 298 LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 31/207 (14%)
Query: 172 NYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGE----------- 220
++ +++Q + ++ Y Y+I +AL Y H +GI HRD+KP N+++ E
Sbjct: 120 DFKQLYQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
Query: 221 -----PNVSY---ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLL-GQPLFPGESG 271
P Y + SRY++ PEL+ Y ++D+WS GC++A ++ +P F G
Sbjct: 179 AEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 238
Query: 272 VDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKFPQIKPHPW----HKVFQKRLPPEA 322
DQLV I KVLGT + ++P + + + W H Q + PEA
Sbjct: 239 YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEA 297
Query: 323 VDLVCRFFQYSPNLRCTALEACVHPFF 349
+D + + +Y R TA EA HP+F
Sbjct: 298 LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 31/207 (14%)
Query: 172 NYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGE----------- 220
++ +++Q + ++ Y Y+I +AL Y H +GI HRD+KP N+++ E
Sbjct: 119 DFKQLYQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 177
Query: 221 -----PNVSY---ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLL-GQPLFPGESG 271
P Y + SRY++ PEL+ Y ++D+WS GC++A ++ +P F G
Sbjct: 178 AEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 237
Query: 272 VDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKFPQIKPHPW----HKVFQKRLPPEA 322
DQLV I KVLGT + ++P + + + W H Q + PEA
Sbjct: 238 YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEA 296
Query: 323 VDLVCRFFQYSPNLRCTALEACVHPFF 349
+D + + +Y R TA EA HP+F
Sbjct: 297 LDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 31/207 (14%)
Query: 172 NYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGE----------- 220
++ +++Q + ++ Y Y+I +AL Y H +GI HRD+KP N+++ E
Sbjct: 119 DFKQLYQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 177
Query: 221 -----PNVSY---ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLL-GQPLFPGESG 271
P Y + SRY++ PEL+ Y ++D+WS GC++A ++ +P F G
Sbjct: 178 AEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 237
Query: 272 VDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKFPQIKPHPW----HKVFQKRLPPEA 322
DQLV I KVLGT + ++P + + + W H Q + PEA
Sbjct: 238 YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEA 296
Query: 323 VDLVCRFFQYSPNLRCTALEACVHPFF 349
+D + + +Y R TA EA HP+F
Sbjct: 297 LDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 31/207 (14%)
Query: 172 NYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGE----------- 220
++ +++Q + ++ Y Y+I +AL Y H +GI HRD+KP N+++ E
Sbjct: 120 DFKQLYQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
Query: 221 -----PNVSY---ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLL-GQPLFPGESG 271
P Y + SRY++ PEL+ Y ++D+WS GC++A ++ +P F G
Sbjct: 179 AEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 238
Query: 272 VDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKFPQIKPHPW----HKVFQKRLPPEA 322
DQLV I KVLGT + ++P + + + W H Q + PEA
Sbjct: 239 YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEA 297
Query: 323 VDLVCRFFQYSPNLRCTALEACVHPFF 349
+D + + +Y R TA EA HP+F
Sbjct: 298 LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 31/207 (14%)
Query: 172 NYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGE----------- 220
++ +++Q + ++ Y Y+I +AL Y H +GI HRD+KP N+++ E
Sbjct: 125 DFKQLYQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 183
Query: 221 -----PNVSY---ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLL-GQPLFPGESG 271
P Y + SRY++ PEL+ Y ++D+WS GC++A ++ +P F G
Sbjct: 184 AEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 243
Query: 272 VDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKFPQIKPHPW----HKVFQKRLPPEA 322
DQLV I KVLGT + ++P + + + W H Q + PEA
Sbjct: 244 YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEA 302
Query: 323 VDLVCRFFQYSPNLRCTALEACVHPFF 349
+D + + +Y R TA EA HP+F
Sbjct: 303 LDFLDKLLRYDHQSRLTAREAMEHPYF 329
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 31/207 (14%)
Query: 172 NYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGE----------- 220
++ +++Q + ++ Y Y+I +AL Y H +GI HRD+KP N+++ E
Sbjct: 118 DFKQLYQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 176
Query: 221 -----PNVSY---ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLL-GQPLFPGESG 271
P Y + SRY++ PEL+ Y ++D+WS GC++A ++ +P F G
Sbjct: 177 AEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 236
Query: 272 VDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKFPQIKPHPW----HKVFQKRLPPEA 322
DQLV I KVLGT + ++P + + + W H Q + PEA
Sbjct: 237 YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEA 295
Query: 323 VDLVCRFFQYSPNLRCTALEACVHPFF 349
+D + + +Y R TA EA HP+F
Sbjct: 296 LDFLDKLLRYDHQSRLTAREAMEHPYF 322
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 31/207 (14%)
Query: 172 NYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGE----------- 220
++ +++Q + ++ Y Y+I +AL Y H+ +GI HRD+KP N+++ E
Sbjct: 120 DFKQLYQTLTDYDIRFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
Query: 221 -----PNVSY---ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLL-GQPLFPGESG 271
P Y + SRY++ PEL+ Y ++D+WS GC++A ++ +P F G
Sbjct: 179 AEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 238
Query: 272 VDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKFPQIKPHPW----HKVFQKRLPPEA 322
DQLV I KVLGT + ++P + + + W H Q + PEA
Sbjct: 239 YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-WERFVHSENQHLVSPEA 297
Query: 323 VDLVCRFFQYSPNLRCTALEACVHPFF 349
+D + + +Y R TA EA HP+F
Sbjct: 298 LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 31/207 (14%)
Query: 172 NYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGE----------- 220
++ ++ Q + ++ Y Y+I +AL Y H +GI HRD+KP N+++ E
Sbjct: 120 DFKQLRQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
Query: 221 -----PNVSY---ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLL-GQPLFPGESG 271
P Y + SRY++ PEL+ Y ++D+WS GC++A ++ +P F G
Sbjct: 179 AEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 238
Query: 272 VDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKFPQIKPHPW----HKVFQKRLPPEA 322
DQLV I KVLGT + ++P + + + W H Q + PEA
Sbjct: 239 YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEA 297
Query: 323 VDLVCRFFQYSPNLRCTALEACVHPFF 349
+D + + +Y R TA EA HP+F
Sbjct: 298 LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 37/210 (17%)
Query: 172 NYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGE----------- 220
++ +++Q + ++ Y Y++ +AL Y H+ GI HRD+KP N+++ +
Sbjct: 121 DFKQLYQILTDFDIRFYMYELLKALDYCHSK-GIMHRDVKPHNVMIDHQQKKLRLIDWGL 179
Query: 221 -----PNVSY---ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLL-GQPLFPGESG 271
P Y + SRY++ PEL+ Y ++D+WS GC++A ++ +P F G+
Sbjct: 180 AEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDN 239
Query: 272 VDQLVEIIKVLGTPTREEIKC--------MNPNYTEFKFPQIKPHPW----HKVFQKRLP 319
DQLV I KVLGT EE+ ++P++ + Q W H + +
Sbjct: 240 YDQLVRIAKVLGT---EELYGYLKKYHIDLDPHFNDI-LGQHSRKRWENFIHSENRHLVS 295
Query: 320 PEAVDLVCRFFQYSPNLRCTALEACVHPFF 349
PEA+DL+ + +Y R TA EA HP+F
Sbjct: 296 PEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 132/295 (44%), Gaps = 49/295 (16%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRE-------------LQIMQMLDHPN 136
+G G++G V++A+ +G VA+K V R N E L+ ++ +HPN
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 137 IVALKH-CFFSTTDKXXXXXXXXXXXXXXTVNRIARNY--SRIHQRMPLIYVKLYTYQIC 193
+V L C S TD+ V++ R Y +P +K Q
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEH-----VDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 194 RALAYIH-NCIGICHRDIKPQNLLVKGEPNV-----------SY-------ICSRYYRAP 234
R L ++H NCI HRD+KP+N+LV V SY + + +YRAP
Sbjct: 123 RGLDFLHANCI--VHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAP 180
Query: 235 ELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 294
E++ +T Y T +D+WS GC+ AE+ +PLF G S DQL +I ++G P ++ +
Sbjct: 181 EVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP-RD 238
Query: 295 PNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFF 349
+ FP P P V + + L+ ++P+ R +A A H +
Sbjct: 239 VSLPRGAFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 132/295 (44%), Gaps = 49/295 (16%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRE-------------LQIMQMLDHPN 136
+G G++G V++A+ +G VA+K V R N E L+ ++ +HPN
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 137 IVALKH-CFFSTTDKXXXXXXXXXXXXXXTVNRIARNY--SRIHQRMPLIYVKLYTYQIC 193
+V L C S TD+ V++ R Y +P +K Q
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEH-----VDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 194 RALAYIH-NCIGICHRDIKPQNLLVKGEPNV-----------SY-------ICSRYYRAP 234
R L ++H NCI HRD+KP+N+LV V SY + + +YRAP
Sbjct: 123 RGLDFLHANCI--VHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAP 180
Query: 235 ELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 294
E++ +T Y T +D+WS GC+ AE+ +PLF G S DQL +I ++G P ++ +
Sbjct: 181 EVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP-RD 238
Query: 295 PNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFF 349
+ FP P P V + + L+ ++P+ R +A A H +
Sbjct: 239 VSLPRGAFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 132/295 (44%), Gaps = 49/295 (16%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRE-------------LQIMQMLDHPN 136
+G G++G V++A+ +G VA+K V R N E L+ ++ +HPN
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 137 IVALKH-CFFSTTDKXXXXXXXXXXXXXXTVNRIARNY--SRIHQRMPLIYVKLYTYQIC 193
+V L C S TD+ V++ R Y +P +K Q
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEH-----VDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 194 RALAYIH-NCIGICHRDIKPQNLLVKGEPNV-----------SY-------ICSRYYRAP 234
R L ++H NCI HRD+KP+N+LV V SY + + +YRAP
Sbjct: 123 RGLDFLHANCI--VHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAP 180
Query: 235 ELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 294
E++ +T Y T +D+WS GC+ AE+ +PLF G S DQL +I ++G P ++ +
Sbjct: 181 EVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP-RD 238
Query: 295 PNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFF 349
+ FP P P V + + L+ ++P+ R +A A H +
Sbjct: 239 VSLPRGAFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 37/210 (17%)
Query: 172 NYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGE----------- 220
++ +++Q + ++ Y Y++ +AL Y H+ GI HRD+KP N+++ +
Sbjct: 126 DFKQLYQILTDFDIRFYMYELLKALDYCHSK-GIMHRDVKPHNVMIDHQQKKLRLIDWGL 184
Query: 221 -----PNVSY---ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLL-GQPLFPGESG 271
P Y + SRY++ PEL+ Y ++D+WS GC++A ++ +P F G+
Sbjct: 185 AEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDN 244
Query: 272 VDQLVEIIKVLGTPTREEIKC--------MNPNYTEFKFPQIKPHPW----HKVFQKRLP 319
DQLV I KVLGT EE+ ++P++ + Q W H + +
Sbjct: 245 YDQLVRIAKVLGT---EELYGYLKKYHIDLDPHFNDI-LGQHSRKRWENFIHSENRHLVS 300
Query: 320 PEAVDLVCRFFQYSPNLRCTALEACVHPFF 349
PEA+DL+ + +Y R TA EA HP+F
Sbjct: 301 PEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 132/294 (44%), Gaps = 37/294 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G+FG VF+A+ R+TG+ VA+KKVL + + RE++I+Q+L H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
+ + +A S + + L +K + L YIH
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN- 144
Query: 204 GICHRDIKPQNLLV---------------------KGEPN--VSYICSRYYRAPELIFGA 240
I HRD+K N+L+ +PN + + + +YR PEL+ G
Sbjct: 145 KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGE 204
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
+Y ID+W GC+MAE+ P+ G + QL I ++ G+ T E ++ NY +
Sbjct: 205 RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD-NYELY 263
Query: 301 KFPQIKPHPWHKVFQKRLP-----PEAVDLVCRFFQYSPNLRCTALEACVHPFF 349
+ ++ KV + RL P A+DL+ + P R + +A H FF
Sbjct: 264 EKLELVKGQKRKV-KDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 132/294 (44%), Gaps = 37/294 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G+FG VF+A+ R+TG+ VA+KKVL + + RE++I+Q+L H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
+ + +A S + + L +K + L YIH
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN- 144
Query: 204 GICHRDIKPQNLLV---------------------KGEPN--VSYICSRYYRAPELIFGA 240
I HRD+K N+L+ +PN + + + +YR PEL+ G
Sbjct: 145 KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGE 204
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
+Y ID+W GC+MAE+ P+ G + QL I ++ G+ T E ++ NY +
Sbjct: 205 RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD-NYELY 263
Query: 301 KFPQIKPHPWHKVFQKRLP-----PEAVDLVCRFFQYSPNLRCTALEACVHPFF 349
+ ++ KV + RL P A+DL+ + P R + +A H FF
Sbjct: 264 EKLELVKGQKRKV-KDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 132/294 (44%), Gaps = 37/294 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G+FG VF+A+ R+TG+ VA+KKVL + + RE++I+Q+L H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
+ + +A S + + L +K + L YIH
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN- 144
Query: 204 GICHRDIKPQNLLV---------------------KGEPN--VSYICSRYYRAPELIFGA 240
I HRD+K N+L+ +PN + + + +YR PEL+ G
Sbjct: 145 KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGE 204
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
+Y ID+W GC+MAE+ P+ G + QL I ++ G+ T E ++ NY +
Sbjct: 205 RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD-NYELY 263
Query: 301 KFPQIKPHPWHKVFQKRLP-----PEAVDLVCRFFQYSPNLRCTALEACVHPFF 349
+ ++ KV + RL P A+DL+ + P R + +A H FF
Sbjct: 264 EKLELVKGQKRKV-KDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 132/294 (44%), Gaps = 37/294 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G G+FG VF+A+ R+TG+ VA+KKVL + + RE++I+Q+L H N+V L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
+ + +A S + + L +K + L YIH
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN- 143
Query: 204 GICHRDIKPQNLLV---------------------KGEPN--VSYICSRYYRAPELIFGA 240
I HRD+K N+L+ +PN + + + +YR PEL+ G
Sbjct: 144 KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGE 203
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
+Y ID+W GC+MAE+ P+ G + QL I ++ G+ T E ++ NY +
Sbjct: 204 RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD-NYELY 262
Query: 301 KFPQIKPHPWHKVFQKRLP-----PEAVDLVCRFFQYSPNLRCTALEACVHPFF 349
+ ++ KV + RL P A+DL+ + P R + +A H FF
Sbjct: 263 EKLELVKGQKRKV-KDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 315
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 134/298 (44%), Gaps = 52/298 (17%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------------RELQIMQMLD--- 133
+G G++G V++A+ +G VA+K V R N RE+ +++ L+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGGGGGGGLPISTVREVALLRRLEAFE 72
Query: 134 HPNIVALKH-CFFSTTDKXXXXXXXXXXXXXXTVNRIARNY--SRIHQRMPLIYVKLYTY 190
HPN+V L C S TD+ V++ R Y +P +K
Sbjct: 73 HPNVVRLMDVCATSRTDREIKVTLVFEH-----VDQDLRTYLDKAPPPGLPAETIKDLMR 127
Query: 191 QICRALAYIH-NCIGICHRDIKPQNLLVKGEPNV-----------SY-------ICSRYY 231
Q R L ++H NCI HRD+KP+N+LV V SY + + +Y
Sbjct: 128 QFLRGLDFLHANCI--VHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWY 185
Query: 232 RAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 291
RAPE++ +T Y T +D+WS GC+ AE+ +PLF G S DQL +I ++G P ++
Sbjct: 186 RAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 244
Query: 292 CMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFF 349
+ + FP P P V + + L+ ++P+ R +A A H +
Sbjct: 245 -RDVSLPRGAFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRALQHSYL 300
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 147/370 (39%), Gaps = 95/370 (25%)
Query: 72 GGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV------LQDKRYKNRE 125
G N K +Y +H++G GS+G V+ A + + VAIKKV L D + RE
Sbjct: 18 GAIIKNVKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILRE 77
Query: 126 LQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLI-- 183
+ I+ L I+ L H D V IA + + + P+
Sbjct: 78 ITILNRLKSDYIIRL-HDLIIPED-------LLKFDELYIVLEIADSDLKKLFKTPIFLT 129
Query: 184 --YVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGEPNV------------------ 223
+VK Y + +IH GI HRD+KP N L+ + +V
Sbjct: 130 EQHVKTILYNLLLGEKFIHES-GIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIH 188
Query: 224 --------------------------SYICSRYYRAPELIFGATEYTTAIDIWSTGCVMA 257
S++ +R+YRAPELI YT +IDIWSTGC+ A
Sbjct: 189 IVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFA 248
Query: 258 ELLLGQ-----------PLFPG-----------------ESGVDQLVEIIKVLGTPTREE 289
ELL PLFPG +S DQL I V+GTP E+
Sbjct: 249 ELLNMMKSHINNPTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEED 308
Query: 290 IKCMNPNYTEFKFPQIKPHPWHKVFQKR---LPPEAVDLVCRFFQYSPNLRCTALEACVH 346
+KC+ K+ ++ P K+ + E +DL+ +++ R T +A H
Sbjct: 309 LKCITKQEV-IKYIKLFPTRDGIDLSKKYSSISKEGIDLLESMLRFNAQKRITIDKALSH 367
Query: 347 PFFDELRDPN 356
P+ ++R N
Sbjct: 368 PYLKDVRKEN 377
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 141/318 (44%), Gaps = 66/318 (20%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDH------PNIVALKH 142
V+G GSFG V +A + + VA+K V +KR+ + + +++L+H N + + H
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIH 163
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ T + ++N Q L V+ + + I + L +H
Sbjct: 164 MLENFTFRNHICMTFELL----SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN 219
Query: 203 IGICHRDIKPQNLLVK--GEPNV----------------SYICSRYYRAPELIFGATEYT 244
I H D+KP+N+L+K G + + I SR+YRAPE+I GA Y
Sbjct: 220 -RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGA-RYG 277
Query: 245 TAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 304
ID+WS GC++AELL G PL PGE DQL +I++LG P++ K ++ + F
Sbjct: 278 MPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ---KLLDASKRAKNFVS 334
Query: 305 IKPHPWH------------------KVFQKRLPPEA---------------VDLVCRFFQ 331
K +P + + + R PPE+ +D + + +
Sbjct: 335 XKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLE 394
Query: 332 YSPNLRCTALEACVHPFF 349
+ P +R T +A HP+
Sbjct: 395 WDPAVRMTPGQALRHPWL 412
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 141/318 (44%), Gaps = 66/318 (20%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDH------PNIVALKH 142
V+G GSFG V +A + + VA+K V +KR+ + + +++L+H N + + H
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIH 163
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ T + ++N Q L V+ + + I + L +H
Sbjct: 164 MLENFTFRNHICMTFELL----SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN 219
Query: 203 IGICHRDIKPQNLLVK--GEPNV----------------SYICSRYYRAPELIFGATEYT 244
I H D+KP+N+L+K G + + I SR+YRAPE+I GA Y
Sbjct: 220 -RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGA-RYG 277
Query: 245 TAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 304
ID+WS GC++AELL G PL PGE DQL +I++LG P++ K ++ + F
Sbjct: 278 MPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ---KLLDASKRAKNFVS 334
Query: 305 IKPHPWH------------------KVFQKRLPPEA---------------VDLVCRFFQ 331
K +P + + + R PPE+ +D + + +
Sbjct: 335 XKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLE 394
Query: 332 YSPNLRCTALEACVHPFF 349
+ P +R T +A HP+
Sbjct: 395 WDPAVRMTPGQALRHPWL 412
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 124/282 (43%), Gaps = 57/282 (20%)
Query: 124 RELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQR---M 180
RE+ +++ L HPN+++L+ F S D+ + + R S+ +++ +
Sbjct: 67 REIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRA-SKANKKPVQL 125
Query: 181 PLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGE---------PNVSY------ 225
P VK YQI + Y+H + HRD+KP N+LV GE ++ +
Sbjct: 126 PRGMVKSLLYQILDGIHYLH-ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 184
Query: 226 -----------ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLF-------- 266
+ + +YRAPEL+ GA YT AIDIW+ GC+ AELL +P+F
Sbjct: 185 PLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 244
Query: 267 -PGESGVDQLVEIIKVLGTPTR---EEIKCMNPNYTEFK---------FPQIKPHPWHKV 313
DQL I V+G P E+IK M + T K IK HKV
Sbjct: 245 TSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKV 304
Query: 314 FQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 355
+ +A L+ + P R T+ +A P+F L DP
Sbjct: 305 ---KPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF--LEDP 341
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 139/318 (43%), Gaps = 66/318 (20%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDH------PNIVALKH 142
V+G G FG V +A + + VA+K V +KR+ + + +++L+H N + + H
Sbjct: 104 VIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIH 163
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ T + ++N Q L V+ + + I + L +H
Sbjct: 164 MLENFTFRNHICMTFELL----SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN 219
Query: 203 IGICHRDIKPQNLLVK--GEPNVSYI-----C-----------SRYYRAPELIFGATEYT 244
I H D+KP+N+L+K G + I C SR+YRAPE+I GA Y
Sbjct: 220 -RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGA-RYG 277
Query: 245 TAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 304
ID+WS GC++AELL G PL PGE DQL +I++LG P + K ++ + F
Sbjct: 278 MPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQ---KLLDASKRAKNFVS 334
Query: 305 IKPHPWH------------------KVFQKRLPPEA---------------VDLVCRFFQ 331
K +P + + + R PPE+ +D + + +
Sbjct: 335 XKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLE 394
Query: 332 YSPNLRCTALEACVHPFF 349
+ P +R T +A HP+
Sbjct: 395 WDPAVRMTPGQALRHPWL 412
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 136/339 (40%), Gaps = 75/339 (22%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR---ELQIMQMLDHPN---- 136
Y + ++G GSFG V +A R E VAIK + K + N+ E++++++++ +
Sbjct: 37 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMK 96
Query: 137 --IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICR 194
IV LK F N R S L + + Q+C
Sbjct: 97 YYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVS-------LNLTRKFAQQMCT 149
Query: 195 ALAYIHN-CIGICHRDIKPQNLLV------------------KGEPNVSYICSRYYRAPE 235
AL ++ + I H D+KP+N+L+ G+ I SR+YR+PE
Sbjct: 150 ALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPE 209
Query: 236 LIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 295
++ G Y AID+WS GC++ E+ G+PLF G + VDQ+ +I++VLG P I P
Sbjct: 210 VLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP-AHILDQAP 267
Query: 296 NYTEFKFPQIKPHPWH----KVFQKRLPPEAV---------------------------- 323
+F F ++ W+ K ++ P
Sbjct: 268 KARKF-FEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVAD 326
Query: 324 -----DLVCRFFQYSPNLRCTALEACVHPFFDELRDPNT 357
DL+ R Y P R A H FF + D T
Sbjct: 327 YLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTADEGT 365
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 122/293 (41%), Gaps = 64/293 (21%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIK-------KVLQDKRYKNRELQIMQMLDHPN 136
Y + V+G GSFG V K + TG+ A+K K DK RE+Q+++ LDHPN
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 110
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
I+ L F DK + I +R + Q+ +
Sbjct: 111 IMKLYEFF---EDKGYFYLVGEVYTGGELFDEIIS-----RKRFSEVDAARIIRQVLSGI 162
Query: 197 AYIHNCIGICHRDIKPQNLLVKG---EPNV------------------SYICSRYYRAPE 235
Y+H I HRD+KP+NLL++ + N+ I + YY APE
Sbjct: 163 TYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPE 221
Query: 236 LIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 295
++ G Y D+WSTG ++ LL G P F G + D L ++ K
Sbjct: 222 VLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK--------------G 265
Query: 296 NYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
YT F+ PQ W KV A DL+ + Y P++R +A +A H +
Sbjct: 266 KYT-FELPQ-----WKKV-----SESAKDLIRKMLTYVPSMRISARDALDHEW 307
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 122/293 (41%), Gaps = 64/293 (21%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIK-------KVLQDKRYKNRELQIMQMLDHPN 136
Y + V+G GSFG V K + TG+ A+K K DK RE+Q+++ LDHPN
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 111
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
I+ L F DK + I +R + Q+ +
Sbjct: 112 IMKLYEFF---EDKGYFYLVGEVYTGGELFDEIIS-----RKRFSEVDAARIIRQVLSGI 163
Query: 197 AYIHNCIGICHRDIKPQNLLVKG---EPNV------------------SYICSRYYRAPE 235
Y+H I HRD+KP+NLL++ + N+ I + YY APE
Sbjct: 164 TYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPE 222
Query: 236 LIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 295
++ G Y D+WSTG ++ LL G P F G + D L ++ K
Sbjct: 223 VLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK--------------G 266
Query: 296 NYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
YT F+ PQ W KV A DL+ + Y P++R +A +A H +
Sbjct: 267 KYT-FELPQ-----WKKV-----SESAKDLIRKMLTYVPSMRISARDALDHEW 308
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 123/293 (41%), Gaps = 64/293 (21%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ-------DKRYKNRELQIMQMLDHPN 136
Y + V+G GSFG V K + TG+ A+K + + DK RE+Q+++ LDHPN
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
I+ L F DK + I +R + Q+ +
Sbjct: 88 IMKLYEFF---EDKGYFYLVGEVYTGGELFDEIIS-----RKRFSEVDAARIIRQVLSGI 139
Query: 197 AYIHNCIGICHRDIKPQNLLVKG---EPNV------------------SYICSRYYRAPE 235
Y+H I HRD+KP+NLL++ + N+ I + YY APE
Sbjct: 140 TYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPE 198
Query: 236 LIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 295
++ G Y D+WSTG ++ LL G P F G + D L ++ K
Sbjct: 199 VLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK--------------G 242
Query: 296 NYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
YT F+ PQ W KV A DL+ + Y P++R +A +A H +
Sbjct: 243 KYT-FELPQ-----WKKV-----SESAKDLIRKMLTYVPSMRISARDALDHEW 284
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 109/230 (47%), Gaps = 36/230 (15%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR---ELQIMQMLDHPN---- 136
Y + ++G GSFG V +A R E VAIK + K + N+ E++++++++ +
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMK 115
Query: 137 --IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICR 194
IV LK F N R S L + + Q+C
Sbjct: 116 YYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVS-------LNLTRKFAQQMCT 168
Query: 195 ALAYIHN-CIGICHRDIKPQNLLV------------------KGEPNVSYICSRYYRAPE 235
AL ++ + I H D+KP+N+L+ G+ I SR+YR+PE
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPE 228
Query: 236 LIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTP 285
++ G Y AID+WS GC++ E+ G+PLF G + VDQ+ +I++VLG P
Sbjct: 229 VLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 277
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 109/230 (47%), Gaps = 36/230 (15%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR---ELQIMQMLDHPN---- 136
Y + ++G GSFG V +A R E VAIK + K + N+ E++++++++ +
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMK 115
Query: 137 --IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICR 194
IV LK F N R S L + + Q+C
Sbjct: 116 YYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVS-------LNLTRKFAQQMCT 168
Query: 195 ALAYIHN-CIGICHRDIKPQNLLV------------------KGEPNVSYICSRYYRAPE 235
AL ++ + I H D+KP+N+L+ G+ I SR+YR+PE
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSRFYRSPE 228
Query: 236 LIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTP 285
++ G Y AID+WS GC++ E+ G+PLF G + VDQ+ +I++VLG P
Sbjct: 229 VLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 277
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 123/293 (41%), Gaps = 64/293 (21%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ-------DKRYKNRELQIMQMLDHPN 136
Y + V+G GSFG V K + TG+ A+K + + DK RE+Q+++ LDHPN
Sbjct: 34 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 93
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
I+ L F DK + I +R + Q+ +
Sbjct: 94 IMKLYEFF---EDKGYFYLVGEVYTGGELFDEIISR-----KRFSEVDAARIIRQVLSGI 145
Query: 197 AYIHNCIGICHRDIKPQNLLVKG---EPNV------------------SYICSRYYRAPE 235
Y+H I HRD+KP+NLL++ + N+ I + YY APE
Sbjct: 146 TYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPE 204
Query: 236 LIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 295
++ G Y D+WSTG ++ LL G P F G + D L ++ K
Sbjct: 205 VLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK--------------G 248
Query: 296 NYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
YT F+ PQ W KV A DL+ + Y P++R +A +A H +
Sbjct: 249 KYT-FELPQ-----WKKV-----SESAKDLIRKMLTYVPSMRISARDALDHEW 290
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 119/293 (40%), Gaps = 64/293 (21%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIK-------KVLQDKRYKNRELQIMQMLDHPN 136
Y + V+G GSFG V K + TG+ A+K K DK RE+Q+++ LDHPN
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
I L F DK + I +R + Q+ +
Sbjct: 88 IXKLYEFF---EDKGYFYLVGEVYTGGELFDEIIS-----RKRFSEVDAARIIRQVLSGI 139
Query: 197 AYIHNCIGICHRDIKPQNLLVKG---EPNV------------------SYICSRYYRAPE 235
Y H I HRD+KP+NLL++ + N+ I + YY APE
Sbjct: 140 TYXHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPE 198
Query: 236 LIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 295
++ G Y D+WSTG ++ LL G P F G + D L ++ K
Sbjct: 199 VLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK--------------G 242
Query: 296 NYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
YT F+ PQ W KV A DL+ + Y P+ R +A +A H +
Sbjct: 243 KYT-FELPQ-----WKKV-----SESAKDLIRKXLTYVPSXRISARDALDHEW 284
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 142/356 (39%), Gaps = 66/356 (18%)
Query: 76 GNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRY---KNRELQIMQML 132
G + YI +G G F V+ AK VA+K V DK Y E++++Q +
Sbjct: 13 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRV 72
Query: 133 DHPN-----------IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMP 181
+ + I+ L F K N +A H+ +P
Sbjct: 73 NDADNTKEDSMGANHILKLLDHF---NHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIP 129
Query: 182 LIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVK----------------------G 219
LIYVK + Q+ L Y+H GI H DIKP+N+L++
Sbjct: 130 LIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD 189
Query: 220 EPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESG------VD 273
E + I +R YR+PE++ GA + DIWST C++ EL+ G LF + G D
Sbjct: 190 EHYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDD 248
Query: 274 QLVEIIKVLG------------TPTREEIKCMNPNYTEFKFPQIKPHPWHKV-FQKRLPP 320
+ +II++LG T T + + N ++ KF ++ K F K
Sbjct: 249 HIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAK 308
Query: 321 EAVDLVCRFFQYSPNLRCTALEACVHPFF------DELRDPNTRL-PNGRPLPPLF 369
E D + Q P R A HP+ +E+R P+ L +G +P F
Sbjct: 309 EISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVPDRELYGSGSDIPGWF 364
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 142/356 (39%), Gaps = 66/356 (18%)
Query: 76 GNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRY---KNRELQIMQML 132
G + YI +G G F V+ AK VA+K V DK Y E++++Q +
Sbjct: 13 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRV 72
Query: 133 DHPN-----------IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMP 181
+ + I+ L F K N +A H+ +P
Sbjct: 73 NDADNTKEDSMGANHILKLLDHF---NHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIP 129
Query: 182 LIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVK----------------------G 219
LIYVK + Q+ L Y+H GI H DIKP+N+L++
Sbjct: 130 LIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD 189
Query: 220 EPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESG------VD 273
E + I +R YR+PE++ GA + DIWST C++ EL+ G LF + G D
Sbjct: 190 EHYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDD 248
Query: 274 QLVEIIKVLG------------TPTREEIKCMNPNYTEFKFPQIKPHPWHKV-FQKRLPP 320
+ +II++LG T T + + N ++ KF ++ K F K
Sbjct: 249 HIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAK 308
Query: 321 EAVDLVCRFFQYSPNLRCTALEACVHPFF------DELRDPNTRL-PNGRPLPPLF 369
E D + Q P R A HP+ +E+R P+ L +G +P F
Sbjct: 309 EISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVPDRELYGSGSDIPGWF 364
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 124/296 (41%), Gaps = 67/296 (22%)
Query: 83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN----RELQIMQMLDHPNIV 138
++I V+G+G+F VF K R TG++ A+K + + +++ E+ +++ + H NIV
Sbjct: 10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIV 69
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVK----LYTYQICR 194
L+ + STT + RI +R +Y + L Q+
Sbjct: 70 TLEDIYESTTHYYLVMQLVSG----------GELFDRILERG--VYTEKDASLVIQQVLS 117
Query: 195 ALAYIHNCIGICHRDIKPQNLL-VKGEPNVSYICSRY-------------------YRAP 234
A+ Y+H GI HRD+KP+NLL + E N + + + Y AP
Sbjct: 118 AVKYLHEN-GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAP 176
Query: 235 ELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 294
E + Y+ A+D WS G + LL G P F E+ +L E IK
Sbjct: 177 E-VLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE-SKLFEKIK-------------- 220
Query: 295 PNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFD 350
Y EF+ P F + A D +C + PN R T +A HP+ D
Sbjct: 221 EGYYEFESP----------FWDDISESAKDFICHLLEKDPNERYTCEKALSHPWID 266
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 124/308 (40%), Gaps = 68/308 (22%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQMLDHPNIVALK 141
++G GSFG V + K R T + A+K V+ KN RE+++++ LDHPNI+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK-VINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
++ + I R H +I Q+ + Y+H
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEI--IKRKRFSEHDAARIIK------QVFSGITYMHK 139
Query: 202 CIGICHRDIKPQNLLVKGEPN---------------------VSYICSRYYRAPELIFGA 240
I HRD+KP+N+L++ + I + YY APE++ G
Sbjct: 140 H-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT 198
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
Y D+WS G ++ LL G P F G++ D L K + F
Sbjct: 199 --YDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL---------------KRVETGKYAF 241
Query: 301 KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLP 360
PQ W + + +A DL+ + + P+LR TA + HP+ ++ ++ P
Sbjct: 242 DLPQ-----W-----RTISDDAKDLIRKMLTFHPSLRITATQCLEHPW---IQKYSSETP 288
Query: 361 NGRPLPPL 368
LP L
Sbjct: 289 TISDLPSL 296
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 129/308 (41%), Gaps = 71/308 (23%)
Query: 75 NGNSKQKVS--YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV----LQDKRYKNRELQI 128
G++K ++ Y E+ +G GS+G V A + T A KK+ ++D +E++I
Sbjct: 17 QGSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEI 76
Query: 129 MQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTV--NRIAR--NYSRIHQRMPLIY 184
M+ LDHPNI+ L F TD V R+ R + +RI +
Sbjct: 77 MKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMK------ 130
Query: 185 VKLYTYQICRALAYIHNCIGICHRDIKPQNLLV---------------------KGEPNV 223
+ A+AY H + + HRD+KP+N L G+
Sbjct: 131 ------DVLSAVAYCHK-LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR 183
Query: 224 SYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLG 283
+ + + YY +P+++ G Y D WS G +M LL G P F + + +++I + G
Sbjct: 184 TKVGTPYYVSPQVLEGL--YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE--G 239
Query: 284 TPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEA 343
T F FP+ W V P+A L+ R SP R T+L+A
Sbjct: 240 T---------------FTFPE---KDWLNV-----SPQAESLIRRLLTKSPKQRITSLQA 276
Query: 344 CVHPFFDE 351
H +F++
Sbjct: 277 LEHEWFEK 284
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 117/288 (40%), Gaps = 65/288 (22%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQMLDHPNIVALK 141
++G GSFG V + K R T + A+K V+ KN RE+++++ LDHPNI+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK-VINKASAKNKDTSTILREVELLKKLDHPNIMKL- 86
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F D + I + R + +K Q+ + Y+H
Sbjct: 87 --FEILEDSSSFYIVGELYTGGELFDEIIKR-KRFSEHDAARIIK----QVFSGITYMHK 139
Query: 202 CIGICHRDIKPQNLLVKGEPN---------------------VSYICSRYYRAPELIFGA 240
I HRD+KP+N+L++ + I + YY APE++ G
Sbjct: 140 H-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT 198
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
Y D+WS G ++ LL G P F G++ D L K + F
Sbjct: 199 --YDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL---------------KRVETGKYAF 241
Query: 301 KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
PQ W + + +A DL+ + + P+LR TA + HP+
Sbjct: 242 DLPQ-----W-----RTISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 117/288 (40%), Gaps = 65/288 (22%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQMLDHPNIVALK 141
++G GSFG V + K R T + A+K V+ KN RE+++++ LDHPNI+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK-VINKASAKNKDTSTILREVELLKKLDHPNIMKL- 86
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F D + I + R + +K Q+ + Y+H
Sbjct: 87 --FEILEDSSSFYIVGELYTGGELFDEIIKR-KRFSEHDAARIIK----QVFSGITYMHK 139
Query: 202 CIGICHRDIKPQNLLVKGEPN---------------------VSYICSRYYRAPELIFGA 240
I HRD+KP+N+L++ + I + YY APE++ G
Sbjct: 140 H-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT 198
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
Y D+WS G ++ LL G P F G++ D L K + F
Sbjct: 199 --YDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL---------------KRVETGKYAF 241
Query: 301 KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
PQ W + + +A DL+ + + P+LR TA + HP+
Sbjct: 242 DLPQ-----W-----RTISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 129/307 (42%), Gaps = 71/307 (23%)
Query: 76 GNSKQKVS--YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV----LQDKRYKNRELQIM 129
G++K ++ Y E+ +G GS+G V A + T A KK+ ++D +E++IM
Sbjct: 1 GSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIM 60
Query: 130 QMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTV--NRIAR--NYSRIHQRMPLIYV 185
+ LDHPNI+ L F TD V R+ R + +RI +
Sbjct: 61 KSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMK------- 113
Query: 186 KLYTYQICRALAYIHNCIGICHRDIKPQNLLV---------------------KGEPNVS 224
+ A+AY H + + HRD+KP+N L G+ +
Sbjct: 114 -----DVLSAVAYCHK-LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT 167
Query: 225 YICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGT 284
+ + YY +P+++ G Y D WS G +M LL G P F + + +++I + GT
Sbjct: 168 KVGTPYYVSPQVLEGL--YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE--GT 223
Query: 285 PTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEAC 344
F FP+ W V P+A L+ R SP R T+L+A
Sbjct: 224 ---------------FTFPE---KDWLNV-----SPQAESLIRRLLTKSPKQRITSLQAL 260
Query: 345 VHPFFDE 351
H +F++
Sbjct: 261 EHEWFEK 267
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 116/283 (40%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ R++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T TV R + SR ++ Y+ ++ AL+Y H+
Sbjct: 80 YFHDAT----RVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT----ELANALSYCHSK 131
Query: 203 IGICHRDIKPQNLLV--KGEPNV--------------SYICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE + + +C Y PE+I G +
Sbjct: 132 -RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDE 189
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G P F + + I +V EF FP
Sbjct: 190 KVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV-----------------EFTFPDF 232
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++ + R T E HP+
Sbjct: 233 ------------VTEGARDLISRLLKHNASQRLTLAEVLEHPW 263
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 116/283 (40%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ R++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T TV R + SR ++ Y+ ++ AL+Y H+
Sbjct: 80 YFHDAT----RVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT----ELANALSYCHSK 131
Query: 203 IGICHRDIKPQNLLV--KGEPNVS--------------YICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE ++ +C Y PE+I G +
Sbjct: 132 -RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRM-HDE 189
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G P F + + I +V EF FP
Sbjct: 190 KVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV-----------------EFTFPDF 232
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++ + R T E HP+
Sbjct: 233 ------------VTEGARDLISRLLKHNASQRLTLAEVLEHPW 263
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 127/304 (41%), Gaps = 71/304 (23%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------------NRELQIMQ 130
YI +G+G+ G V A R+T + VAIK ++ +++ E++I++
Sbjct: 18 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 76
Query: 131 MLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTY 190
L+HP I+ +K+ F D +++ N +R+ KLY Y
Sbjct: 77 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVGN-----KRLKEATCKLYFY 127
Query: 191 QICRALAYIHNCIGICHRDIKPQNLLVK-------------------GEPNV-SYICSR- 229
Q+ A+ Y+H GI HRD+KP+N+L+ GE ++ +C
Sbjct: 128 QMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 186
Query: 230 YYRAPELI--FGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 287
Y APE++ G Y A+D WS G ++ L G P F + R
Sbjct: 187 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-----------------SEHR 229
Query: 288 EEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHP 347
++ + T K+ I P W +V +K A+DLV + P R T EA HP
Sbjct: 230 TQVS-LKDQITSGKYNFI-PEVWAEVSEK-----ALDLVKKLLVVDPKARFTTEEALRHP 282
Query: 348 FFDE 351
+ +
Sbjct: 283 WLQD 286
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 127/304 (41%), Gaps = 71/304 (23%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------------NRELQIMQ 130
YI +G+G+ G V A R+T + VAIK ++ +++ E++I++
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 70
Query: 131 MLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTY 190
L+HP I+ +K+ F D +++ N +R+ KLY Y
Sbjct: 71 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVGN-----KRLKEATCKLYFY 121
Query: 191 QICRALAYIHNCIGICHRDIKPQNLLVK-------------------GEPNV-SYICSR- 229
Q+ A+ Y+H GI HRD+KP+N+L+ GE ++ +C
Sbjct: 122 QMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 180
Query: 230 YYRAPELI--FGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 287
Y APE++ G Y A+D WS G ++ L G P F + R
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-----------------SEHR 223
Query: 288 EEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHP 347
++ + T K+ I P W +V +K A+DLV + P R T EA HP
Sbjct: 224 TQVS-LKDQITSGKYNFI-PEVWAEVSEK-----ALDLVKKLLVVDPKARFTTEEALRHP 276
Query: 348 FFDE 351
+ +
Sbjct: 277 WLQD 280
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 127/304 (41%), Gaps = 71/304 (23%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------------NRELQIMQ 130
YI +G+G+ G V A R+T + VAIK ++ +++ E++I++
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 70
Query: 131 MLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTY 190
L+HP I+ +K+ F D +++ N +R+ KLY Y
Sbjct: 71 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVGN-----KRLKEATCKLYFY 121
Query: 191 QICRALAYIHNCIGICHRDIKPQNLLVK-------------------GEPNV-SYICSR- 229
Q+ A+ Y+H GI HRD+KP+N+L+ GE ++ +C
Sbjct: 122 QMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 180
Query: 230 YYRAPELI--FGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 287
Y APE++ G Y A+D WS G ++ L G P F + R
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-----------------SEHR 223
Query: 288 EEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHP 347
++ + T K+ I P W +V +K A+DLV + P R T EA HP
Sbjct: 224 TQVS-LKDQITSGKYNFI-PEVWAEVSEK-----ALDLVKKLLVVDPKARFTTEEALRHP 276
Query: 348 FFDE 351
+ +
Sbjct: 277 WLQD 280
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 125/304 (41%), Gaps = 71/304 (23%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------------NRELQIMQ 130
YI +G+G+ G V A R+T + VAIK ++ +++ E++I++
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 70
Query: 131 MLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTY 190
L+HP I+ +K+ F D +++ N +R+ KLY Y
Sbjct: 71 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVGN-----KRLKEATCKLYFY 121
Query: 191 QICRALAYIHNCIGICHRDIKPQNLLVKGEPN--------------------VSYICSR- 229
Q+ A+ Y+H GI HRD+KP+N+L+ + + +C
Sbjct: 122 QMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 180
Query: 230 YYRAPELI--FGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 287
Y APE++ G Y A+D WS G ++ L G P F + R
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-----------------SEHR 223
Query: 288 EEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHP 347
++ + T K+ I P W +V +K A+DLV + P R T EA HP
Sbjct: 224 TQVS-LKDQITSGKYNFI-PEVWAEVSEK-----ALDLVKKLLVVDPKARFTTEEALRHP 276
Query: 348 FFDE 351
+ +
Sbjct: 277 WLQD 280
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 125/304 (41%), Gaps = 71/304 (23%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------------NRELQIMQ 130
YI +G+G+ G V A R+T + VAIK ++ +++ E++I++
Sbjct: 11 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 69
Query: 131 MLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTY 190
L+HP I+ +K+ F D +++ N +R+ KLY Y
Sbjct: 70 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVGN-----KRLKEATCKLYFY 120
Query: 191 QICRALAYIHNCIGICHRDIKPQNLLVKGEPN--------------------VSYICSR- 229
Q+ A+ Y+H GI HRD+KP+N+L+ + + +C
Sbjct: 121 QMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 179
Query: 230 YYRAPELI--FGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 287
Y APE++ G Y A+D WS G ++ L G P F + R
Sbjct: 180 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-----------------SEHR 222
Query: 288 EEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHP 347
++ + T K+ I P W +V +K A+DLV + P R T EA HP
Sbjct: 223 TQVS-LKDQITSGKYNFI-PEVWAEVSEK-----ALDLVKKLLVVDPKARFTTEEALRHP 275
Query: 348 FFDE 351
+ +
Sbjct: 276 WLQD 279
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ + + I+A+K + + + K RE++I L HPNI+ L
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F +T TV R + S+ ++ Y+ ++ AL+Y H+
Sbjct: 76 YFHDST----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYCHSK 127
Query: 203 IGICHRDIKPQNLLV--KGEPNVS--------------YICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE ++ +C Y PE+I G +
Sbjct: 128 -KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRM-HDE 185
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + D I +V EF FP
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRV-----------------EFTFPDF 228
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 229 ------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 124/318 (38%), Gaps = 55/318 (17%)
Query: 89 VVGTGSFGVVFQA-KCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFST 147
+G G+FG V + + G VA+K V RY +Q+L+H N F
Sbjct: 21 TLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCV 80
Query: 148 TDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMP--LIYVKLYTYQICRALAYIHNCIGI 205
+ ++ + + +P L +++ YQIC+++ ++H+ +
Sbjct: 81 QMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN-KL 139
Query: 206 CHRDIKPQNLLV-----------------------------------KGEPNVSYICSRY 230
H D+KP+N+L E + + + +R+
Sbjct: 140 THTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRH 199
Query: 231 YRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLG------- 283
YRAPE+I A ++ D+WS GC++ E LG +FP + L + ++LG
Sbjct: 200 YRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMI 258
Query: 284 --TPTREEIKCMNPNYTE------FKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPN 335
T R+ ++ E + KP + Q DL+ + +Y P
Sbjct: 259 QKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPA 318
Query: 336 LRCTALEACVHPFFDELR 353
R T EA HPFFD L+
Sbjct: 319 KRITLREALKHPFFDLLK 336
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 123/318 (38%), Gaps = 55/318 (17%)
Query: 89 VVGTGSFGVVFQA-KCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFST 147
+G G+FG V + + G VA+K V RY +Q+L+H N F
Sbjct: 21 TLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCV 80
Query: 148 TDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMP--LIYVKLYTYQICRALAYIHNCIGI 205
+ ++ + + +P L +++ YQIC+++ ++H+ +
Sbjct: 81 QMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN-KL 139
Query: 206 CHRDIKPQNLLV-----------------------------------KGEPNVSYICSRY 230
H D+KP+N+L E + + + R+
Sbjct: 140 THTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVXXRH 199
Query: 231 YRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLG------- 283
YRAPE+I A ++ D+WS GC++ E LG +FP + L + ++LG
Sbjct: 200 YRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMI 258
Query: 284 --TPTREEIKCMNPNYTE------FKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPN 335
T R+ ++ E + KP + Q DL+ + +Y P
Sbjct: 259 QKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPA 318
Query: 336 LRCTALEACVHPFFDELR 353
R T EA HPFFD L+
Sbjct: 319 KRITLREALKHPFFDLLK 336
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ +++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T TV R + S+ ++ Y+ ++ AL+Y H+
Sbjct: 102 YFHDAT----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYCHSK 153
Query: 203 IGICHRDIKPQNLLV--KGEPNV--------------SYICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE + + +C Y PE+I G +
Sbjct: 154 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDE 211
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + + I +V EF FP
Sbjct: 212 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF 254
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 255 ------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 285
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 119/283 (42%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ +++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T TV R + S+ ++ Y+ ++ AL+Y H+
Sbjct: 77 YFHDAT----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYCHSK 128
Query: 203 IGICHRDIKPQNLLV--KGEPNVS---YIC----SRY--------YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE ++ + C SR Y PE+I G +
Sbjct: 129 -RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRM-HDE 186
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + + I +V EF FP
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF 229
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 230 ------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ +++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T TV R + S+ ++ Y+ ++ AL+Y H+
Sbjct: 93 YFHDAT----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYCHSK 144
Query: 203 IGICHRDIKPQNLLV--KGEPNV--------------SYICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE + + +C Y PE+I G +
Sbjct: 145 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDE 202
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + + I +V EF FP
Sbjct: 203 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF 245
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 246 ------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 276
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ +++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T TV R + S+ ++ Y+ ++ AL+Y H+
Sbjct: 76 YFHDAT----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYCHSK 127
Query: 203 IGICHRDIKPQNLLV--KGEPNV--------------SYICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE + + +C Y PE+I G +
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRM-HDE 185
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + + I +V EF FP
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF 228
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 229 ------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ +++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T TV R + S+ ++ Y+ ++ AL+Y H+
Sbjct: 102 YFHDAT----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYCHSK 153
Query: 203 IGICHRDIKPQNLLV--KGEPNVSY--------------ICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE ++ +C Y PE+I G +
Sbjct: 154 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRM-HDE 211
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + + I +V EF FP
Sbjct: 212 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF 254
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 255 ------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 285
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ +++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T TV R + S+ ++ Y+ ++ AL+Y H+
Sbjct: 79 YFHDAT----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYCHSK 130
Query: 203 IGICHRDIKPQNLLV--KGEPNV--------------SYICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE + + +C Y PE+I G +
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDE 188
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + + I +V EF FP
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF 231
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 232 ------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ +++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T TV R + S+ ++ Y+ ++ AL+Y H+
Sbjct: 76 YFHDAT----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYCHSK 127
Query: 203 IGICHRDIKPQNLLV--KGEPNVS--------------YICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE ++ +C Y PE+I G +
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRM-HDE 185
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + + I +V EF FP
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF 228
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 229 ------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ +++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T TV R + S+ ++ Y+ ++ AL+Y H+
Sbjct: 79 YFHDAT----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYCHSK 130
Query: 203 IGICHRDIKPQNLLV--KGEPNVS--------------YICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE ++ +C Y PE+I G +
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRM-HDE 188
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + + I +V EF FP
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF 231
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 232 ------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 123/304 (40%), Gaps = 71/304 (23%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------------NRELQIMQ 130
YI +G+G+ G V A R+T + VAI+ ++ +++ E++I++
Sbjct: 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIR-IISKRKFAIGSAREADPALNVETEIEILK 195
Query: 131 MLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTY 190
L+HP I+ +K+ F D +++ N +R+ KLY Y
Sbjct: 196 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVGN-----KRLKEATCKLYFY 246
Query: 191 QICRALAYIHNCIGICHRDIKPQNLLVKGEPN--------------------VSYICSR- 229
Q+ A+ Y+H GI HRD+KP+N+L+ + + +C
Sbjct: 247 QMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 305
Query: 230 YYRAPELI--FGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 287
Y APE++ G Y A+D WS G ++ L G P F L +
Sbjct: 306 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-----------K 354
Query: 288 EEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHP 347
++I N+ P W +V +K A+DLV + P R T EA HP
Sbjct: 355 DQITSGKYNFI--------PEVWAEVSEK-----ALDLVKKLLVVDPKARFTTEEALRHP 401
Query: 348 FFDE 351
+ +
Sbjct: 402 WLQD 405
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 125/304 (41%), Gaps = 71/304 (23%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------------NRELQIMQ 130
YI +G+G+ G V A R+T + VAI+ ++ +++ E++I++
Sbjct: 151 YIMSKTLGSGACGEVKLAFERKTCKKVAIR-IISKRKFAIGSAREADPALNVETEIEILK 209
Query: 131 MLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTY 190
L+HP I+ +K+ F D +++ N +R+ KLY Y
Sbjct: 210 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVGN-----KRLKEATCKLYFY 260
Query: 191 QICRALAYIHNCIGICHRDIKPQNLLVK-------------------GEPNV-SYICSR- 229
Q+ A+ Y+H GI HRD+KP+N+L+ GE ++ +C
Sbjct: 261 QMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 319
Query: 230 YYRAPELI--FGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 287
Y APE++ G Y A+D WS G ++ L G P F L +
Sbjct: 320 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-----------K 368
Query: 288 EEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHP 347
++I N+ P W +V +K A+DLV + P R T EA HP
Sbjct: 369 DQITSGKYNFI--------PEVWAEVSEK-----ALDLVKKLLVVDPKARFTTEEALRHP 415
Query: 348 FFDE 351
+ +
Sbjct: 416 WLQD 419
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ +++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T TV R + S+ ++ Y+ ++ AL+Y H+
Sbjct: 79 YFHDAT----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYCHSK 130
Query: 203 IGICHRDIKPQNLLV--KGEPNV--------------SYICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE + + +C Y PE+I G +
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDE 188
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + + I +V EF FP
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF 231
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 232 ------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ +++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T TV R + S+ ++ Y+ ++ AL+Y H+
Sbjct: 79 YFHDAT----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYCHSK 130
Query: 203 IGICHRDIKPQNLLV--KGEPNV--------------SYICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE + + +C Y PE+I G +
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDE 188
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + + I +V EF FP
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF 231
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 232 ------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ +++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T TV R + S+ ++ Y+ ++ AL+Y H+
Sbjct: 78 YFHDAT----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYCHSK 129
Query: 203 IGICHRDIKPQNLLV--KGEPNV--------------SYICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE + + +C Y PE+I G +
Sbjct: 130 -RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDE 187
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + + I +V EF FP
Sbjct: 188 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF 230
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 231 ------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 261
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ +++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T TV R + S+ ++ Y+ ++ AL+Y H+
Sbjct: 78 YFHDAT----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYCHSK 129
Query: 203 IGICHRDIKPQNLLV--KGEPNVS--------------YICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE ++ +C Y PE+I G +
Sbjct: 130 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRM-HDE 187
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + + I +V EF FP
Sbjct: 188 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF 230
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 231 ------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 261
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ +++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T TV R + S+ ++ Y+ ++ AL+Y H+
Sbjct: 75 YFHDAT----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYCHSK 126
Query: 203 IGICHRDIKPQNLLV--KGEPNV--------------SYICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE + + +C Y PE+I G +
Sbjct: 127 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDE 184
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + + I +V EF FP
Sbjct: 185 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF 227
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 228 ------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 258
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ +++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T TV R + S+ ++ Y+ ++ AL+Y H+
Sbjct: 77 YFHDAT----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYCHSK 128
Query: 203 IGICHRDIKPQNLLV--KGEPNVS--------------YICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE ++ +C Y PE+I G +
Sbjct: 129 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRM-HDE 186
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + + I +V EF FP
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF 229
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 230 ------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ +++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T TV R + S+ ++ Y+ ++ AL+Y H+
Sbjct: 76 YFHDAT----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYCHSK 127
Query: 203 IGICHRDIKPQNLLV--KGEPNVS--------------YICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE ++ +C Y PE+I G +
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRM-HDE 185
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + + I +V EF FP
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF 228
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 229 ------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ +++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T TV R + S+ ++ Y+ ++ AL+Y H+
Sbjct: 80 YFHDAT----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYCHSK 131
Query: 203 IGICHRDIKPQNLLV--KGEPNV--------------SYICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE + + +C Y PE+I G +
Sbjct: 132 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDE 189
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + + I +V EF FP
Sbjct: 190 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF 232
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 233 ------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 263
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 32/209 (15%)
Query: 87 EHVVGTGSFGVVFQAKCRETGEIVAIKKV----LQDKRYKN---RELQIMQMLDHPNIVA 139
E +G G F V++A C G VA+KKV L D + + +E+ +++ L+HPN++
Sbjct: 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIK 96
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
++++ + ++R+ +++ + + +P V Y Q+C AL ++
Sbjct: 97 ----YYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 200 HNCIGICHRDIKPQNLLVKGEPNV-------------------SYICSRYYRAPELIFGA 240
H+ + HRDIKP N+ + V S + + YY +PE I
Sbjct: 153 HS-RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH-E 210
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGE 269
Y DIWS GC++ E+ Q F G+
Sbjct: 211 NGYNFKSDIWSLGCLLYEMAALQSPFYGD 239
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ +++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T TV R + S+ ++ Y+ ++ AL+Y H+
Sbjct: 76 YFHDAT----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYCHSK 127
Query: 203 IGICHRDIKPQNLLV--KGEPNV--------------SYICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE + + +C Y PE+I G +
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRM-HDE 185
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + + I +V EF FP
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF 228
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 229 ------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ +++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T TV R + S+ ++ Y+ ++ AL+Y H+
Sbjct: 81 YFHDAT----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYCHSK 132
Query: 203 IGICHRDIKPQNLLV--KGEPNV--------------SYICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE + + +C Y PE+I G +
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDE 190
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + + I +V EF FP
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF 233
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 234 ------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ +++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T TV R + S+ ++ Y+ ++ AL+Y H+
Sbjct: 76 YFHDAT----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYCHSK 127
Query: 203 IGICHRDIKPQNLLV--KGEPNV--------------SYICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE + + +C Y PE+I G +
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDE 185
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + + I +V EF FP
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF 228
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 229 ------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ +++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T TV R + S+ ++ Y+ ++ AL+Y H+
Sbjct: 79 YFHDAT----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYCHSK 130
Query: 203 IGICHRDIKPQNLLV--KGEPNVS--------------YICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE ++ +C Y PE+I G +
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRM-HDE 188
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + + I +V EF FP
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF 231
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 232 ------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ +++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T TV R + S+ ++ Y+ ++ AL+Y H+
Sbjct: 81 YFHDAT----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYCHSK 132
Query: 203 IGICHRDIKPQNLLV--KGEPNV--------------SYICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE + + +C Y PE+I G +
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRM-HDE 190
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + + I +V EF FP
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF 233
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 234 ------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ +++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T TV R + S+ ++ Y+ ++ AL+Y H+
Sbjct: 79 YFHDAT----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYCHSK 130
Query: 203 IGICHRDIKPQNLLV--KGEPNVSY--------------ICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE ++ +C Y PE+I G +
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRM-HDE 188
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + + I +V EF FP
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF 231
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 232 ------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ +++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T TV R + S+ ++ Y+ ++ AL+Y H+
Sbjct: 76 YFHDAT----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYCHSK 127
Query: 203 IGICHRDIKPQNLLV--KGEPNV--------------SYICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE + + +C Y PE+I G +
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRM-HDE 185
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + + I +V EF FP
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF 228
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 229 ------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ +++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T TV R + S+ ++ Y+ ++ AL+Y H+
Sbjct: 77 YFHDAT----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYCHSK 128
Query: 203 IGICHRDIKPQNLLV--KGEPNV--------------SYICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE + + +C Y PE+I G +
Sbjct: 129 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRM-HDE 186
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + + I +V EF FP
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF 229
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 230 ------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ +++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T TV R + S+ ++ Y+ ++ AL+Y H+
Sbjct: 76 YFHDAT----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYCHSK 127
Query: 203 IGICHRDIKPQNLLV--KGEPNV--------------SYICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE + + +C Y PE+I G +
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRM-HDE 185
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + + I +V EF FP
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF 228
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 229 ------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 116/283 (40%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ +++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T TV R + S+ ++ Y+ ++ AL+Y H+
Sbjct: 81 YFHDAT----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYCHSK 132
Query: 203 IGICHRDIKPQNLLV--KGEPNV--------------SYICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE + + +C Y PE I G +
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRX-HDE 190
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + + I +V EF FP
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF 233
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 234 ------------VTEGARDLISRLLKHNPSQRPXLREVLEHPW 264
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 116/283 (40%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ ++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T TV R + S+ ++ Y+ ++ AL+Y H+
Sbjct: 73 YFHDAT----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYCHSK 124
Query: 203 IGICHRDIKPQNLLV--KGEPNV--------------SYICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE + + +C Y PE+I G +
Sbjct: 125 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDE 182
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + + I +V EF FP
Sbjct: 183 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF 225
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 226 ------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 256
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 114/287 (39%), Gaps = 64/287 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR-------ELQIMQMLDHPNIVALKH 142
+G+G++G V K + TG AIK + + E+ +++ LDHPNI+ L
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F DK + I + Q+ + + Q+ Y+H
Sbjct: 72 FF---EDKRNYYLVMEVYRGGELFDEII-----LRQKFSEVDAAVIMKQVLSGTTYLHKH 123
Query: 203 IGICHRDIKPQNLLVKGEPNVSYI---------------------CSRYYRAPELIFGAT 241
I HRD+KP+NLL++ + + I + YY APE++
Sbjct: 124 -NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL--RK 180
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 301
+Y D+WS G ++ LL G P F G++ DQ EI+K +F
Sbjct: 181 KYDEKCDVWSCGVILYILLCGYPPFGGQT--DQ--EILK-------------RVEKGKFS 223
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
F P W +V EA LV Y P+ R +A EA HP+
Sbjct: 224 FD---PPDWTQV-----SDEAKQLVKLMLTYEPSKRISAEEALNHPW 262
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 124/304 (40%), Gaps = 77/304 (25%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKR--YKNRELQIMQMLDHPNIVALK 141
++G GSF V A+ T AIK ++++ + Y RE +M LDHP V L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 97
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+F+ D N Y R + YT +I AL Y+H
Sbjct: 98 --YFTFQDDEKLYFGLSYAK-----NGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 202 CIGICHRDIKPQNLLVKGEPNV---------------------SYICSRYYRAPELIFGA 240
GI HRD+KP+N+L+ + ++ S++ + Y +PEL+
Sbjct: 151 K-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 209
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYT 298
+ ++ D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 210 SASKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL----------------- 249
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRF--FQYSPNLRCTALEAC----VHPFFDEL 352
E+ FP+ + P+A DLV + + L C +E HPFF+ +
Sbjct: 250 EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
Query: 353 RDPN 356
N
Sbjct: 298 TWEN 301
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 121/304 (39%), Gaps = 77/304 (25%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKR--YKNRELQIMQMLDHPNIVALK 141
++G GSF V A+ T AIK ++++ + Y RE +M LDHP V L
Sbjct: 44 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 103
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
CF N Y R + YT +I AL Y+H
Sbjct: 104 FCF--------QDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 155
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------------YICSRYYRAPELIFGA 240
GI HRD+KP+N+L+ + ++ ++ + Y +PEL+
Sbjct: 156 K-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 214
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYT 298
+ ++ D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 215 SACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL----------------- 254
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRF--FQYSPNLRCTALEAC----VHPFFDEL 352
E+ FP+ + P+A DLV + + L C +E HPFF+ +
Sbjct: 255 EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 302
Query: 353 RDPN 356
N
Sbjct: 303 TWEN 306
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 131/310 (42%), Gaps = 70/310 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
+G+G++G V + + T AIK + + + E+ ++++LDHPNI+ L +
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKL-YD 103
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPL--IYVKLYTYQICRALAYIHN 201
FF DK + I IH RM + + Q+ + Y+H
Sbjct: 104 FFE--DKRNYYLVMECYKGGELFDEI------IH-RMKFNEVDAAVIIKQVLSGVTYLHK 154
Query: 202 CIGICHRDIKPQNLLVKGEPNVSYI---------------------CSRYYRAPELIFGA 240
I HRD+KP+NLL++ + + I + YY APE++
Sbjct: 155 H-NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVL--R 211
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
+Y D+WS G ++ LL G P F G++ DQ EI++ K YT F
Sbjct: 212 KKYDEKCDVWSIGVILFILLAGYPPFGGQT--DQ--EILR----------KVEKGKYT-F 256
Query: 301 KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLP 360
P+ W K + A DL+ + Q+ R +A +A HP+ E+ ++
Sbjct: 257 DSPE-----W-----KNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM---CSKKE 303
Query: 361 NGRPLPPLFN 370
+G LP L N
Sbjct: 304 SGIELPSLAN 313
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 114/287 (39%), Gaps = 64/287 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR-------ELQIMQMLDHPNIVALKH 142
+G+G++G V K + TG AIK + + E+ +++ LDHPNI+ L
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F DK + I + Q+ + + Q+ Y+H
Sbjct: 89 FF---EDKRNYYLVMEVYRGGELFDEII-----LRQKFSEVDAAVIMKQVLSGTTYLHKH 140
Query: 203 IGICHRDIKPQNLLVKGEPNVSYI---------------------CSRYYRAPELIFGAT 241
I HRD+KP+NLL++ + + I + YY APE++
Sbjct: 141 -NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL--RK 197
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 301
+Y D+WS G ++ LL G P F G++ DQ EI+K +F
Sbjct: 198 KYDEKCDVWSCGVILYILLCGYPPFGGQT--DQ--EILK-------------RVEKGKFS 240
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
F P W +V EA LV Y P+ R +A EA HP+
Sbjct: 241 FD---PPDWTQV-----SDEAKQLVKLMLTYEPSKRISAEEALNHPW 279
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +ETG A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+ F ++ + RI R +S H R Y QI Y+H
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +ETG A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+ F ++ + RI R +S H R Y QI Y+H
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 104/261 (39%), Gaps = 49/261 (18%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIK----KVLQDKRYK-NRELQIMQMLDHPNIVALKHC 143
V+GTG+F V A+ + T ++VAIK K L+ K E+ ++ + HPNIVAL
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
+ S + R R+ +Q+ A+ Y+H+ +
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL--------IFQVLDAVKYLHD-L 135
Query: 204 GICHRDIKPQNLLVKG-EPNVSYICSRY--------------------YRAPELIFGATE 242
GI HRD+KP+NLL + + + S + Y APE +
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE-VLAQKP 194
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV---LGTPTREEIKCMNPNY-- 297
Y+ A+D WS G + LL G P F E+ +I+K +P ++I ++
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 298 --------TEFKFPQIKPHPW 310
F Q HPW
Sbjct: 255 HLMEKDPEKRFTCEQALQHPW 275
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +ETG A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+ F ++ + RI R +S H R Y QI Y+H
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 124/304 (40%), Gaps = 77/304 (25%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKR--YKNRELQIMQMLDHPNIVALK 141
++G GSF V A+ T AIK ++++ + Y RE +M LDHP V L
Sbjct: 40 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 98
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+F+ D N Y R + YT +I AL Y+H
Sbjct: 99 --YFTFQDDEKLYFGLSYAK-----NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 151
Query: 202 CIGICHRDIKPQNLLVKGEPNV---------------------SYICSRYYRAPELIFGA 240
GI HRD+KP+N+L+ + ++ S++ + Y +PEL+
Sbjct: 152 K-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 210
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYT 298
+ ++ D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 211 SACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL----------------- 250
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRF--FQYSPNLRCTALEAC----VHPFFDEL 352
E+ FP+ + P+A DLV + + L C +E HPFF+ +
Sbjct: 251 EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 298
Query: 353 RDPN 356
N
Sbjct: 299 TWEN 302
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 124/304 (40%), Gaps = 77/304 (25%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKR--YKNRELQIMQMLDHPNIVALK 141
++G GSF V A+ T AIK ++++ + Y RE +M LDHP V L
Sbjct: 36 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 94
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+F+ D N Y R + YT +I AL Y+H
Sbjct: 95 --YFTFQDDEKLYFGLSYAK-----NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 147
Query: 202 CIGICHRDIKPQNLLVKGEPNV---------------------SYICSRYYRAPELIFGA 240
GI HRD+KP+N+L+ + ++ S++ + Y +PEL+
Sbjct: 148 K-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 206
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYT 298
+ ++ D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 207 SACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL----------------- 246
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRF--FQYSPNLRCTALEAC----VHPFFDEL 352
E+ FP+ + P+A DLV + + L C +E HPFF+ +
Sbjct: 247 EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 294
Query: 353 RDPN 356
N
Sbjct: 295 TWEN 298
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 123/304 (40%), Gaps = 77/304 (25%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKR--YKNRELQIMQMLDHPNIVALK 141
++G GSF V A+ T AIK ++++ + Y RE +M LDHP V L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 97
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+F+ D N Y R + YT +I AL Y+H
Sbjct: 98 --YFTFQDDEKLYFGLSYAK-----NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------------YICSRYYRAPELIFGA 240
GI HRD+KP+N+L+ + ++ ++ + Y +PEL+
Sbjct: 151 K-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYT 298
+ ++ D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 210 SAXKSS-DLWALGCIIYQLVAGLP--PFRAGNEGLIFAKIIKL----------------- 249
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRF--FQYSPNLRCTALEAC----VHPFFDEL 352
E+ FP+ + P+A DLV + + L C +E HPFF+ +
Sbjct: 250 EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
Query: 353 RDPN 356
N
Sbjct: 298 TWEN 301
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ +++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T + ++ S+ ++ Y+ ++ AL+Y H+
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKL----SKFDEQRTATYIT----ELANALSYCHSK 132
Query: 203 IGICHRDIKPQNLLV--KGEPNV--------------SYICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE + + +C Y PE+I G +
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDE 190
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + + I +V EF FP
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF 233
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 234 ------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 124/304 (40%), Gaps = 77/304 (25%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKR--YKNRELQIMQMLDHPNIVALK 141
++G GSF V A+ T AIK ++++ + Y RE +M LDHP V L
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 95
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+F+ D N Y R + YT +I AL Y+H
Sbjct: 96 --YFTFQDDEKLYFGLSYAK-----NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 202 CIGICHRDIKPQNLLVKGEPNV---------------------SYICSRYYRAPELIFGA 240
GI HRD+KP+N+L+ + ++ +++ + Y +PEL+
Sbjct: 149 K-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEK 207
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYT 298
+ ++ D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 208 SACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL----------------- 247
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRF--FQYSPNLRCTALEAC----VHPFFDEL 352
E+ FP+ + P+A DLV + + L C +E HPFF+ +
Sbjct: 248 EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
Query: 353 RDPN 356
N
Sbjct: 296 TWEN 299
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 116/283 (40%), Gaps = 63/283 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ +++ I+A+K + + + K RE++I L HPNI+ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F T + ++ S+ ++ Y+ ++ AL+Y H+
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKL----SKFDEQRTATYIT----ELANALSYCHSK 132
Query: 203 IGICHRDIKPQNLLV--KGEPNVSYI-------CSRY--------YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ GE ++ SR Y PE+I G +
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRM-HDE 190
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
+D+WS G + E L+G+P F + + I +V EF FP
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF 233
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ A DL+ R +++P+ R E HP+
Sbjct: 234 ------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 91/214 (42%), Gaps = 37/214 (17%)
Query: 83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--------RELQIMQMLDH 134
+Y + +G G+F V A+ TG VA+K + DK N RE++IM++L+H
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKII--DKTQLNPTSLQKLFREVRIMKILNH 73
Query: 135 PNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICR 194
PNIV L F + V +Y H RM + QI
Sbjct: 74 PNIVKL----FEVIETEKTLYLVMEYASGGEV----FDYLVAHGRMKEKEARAKFRQIVS 125
Query: 195 ALAYIHNCIGICHRDIKPQNLLVKGEPNV------------------SYICSRYYRAPEL 236
A+ Y H I HRD+K +NLL+ G+ N+ ++ S Y APEL
Sbjct: 126 AVQYCHQKY-IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPEL 184
Query: 237 IFGATEYTTAIDIWSTGCVMAELLLGQPLFPGES 270
G +D+WS G ++ L+ G F G++
Sbjct: 185 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 109/280 (38%), Gaps = 56/280 (20%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--RELQIMQMLDHPNIVALKHCFFST 147
+G GS+G V++A +ETG+IVAIK+V + + +E+ IMQ D P++V +F
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKN 96
Query: 148 TDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGICH 207
TD + RN + + I + L Y+H I H
Sbjct: 97 TDLWIVMEYCGAGSVSDIIR--LRNKTLTEDEIATIL-----QSTLKGLEYLHFMRKI-H 148
Query: 208 RDIKPQNLLVKGEPNVSY-------------------ICSRYYRAPELIFGATEYTTAID 248
RDIK N+L+ E + I + ++ APE+I Y D
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVI-QEIGYNCVAD 207
Query: 249 IWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH 308
IWS G E+ G+P + + + + PT NP T F+ KP
Sbjct: 208 IWSLGITAIEMAEGKPPYA------DIHPMRAIFMIPT-------NPPPT-FR----KPE 249
Query: 309 PWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
W F D V + SP R TA + HPF
Sbjct: 250 LWSDNF--------TDFVKQCLVKSPEQRATATQLLQHPF 281
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 104/261 (39%), Gaps = 49/261 (18%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIK----KVLQDKRYK-NRELQIMQMLDHPNIVALKHC 143
V+GTG+F V A+ + T ++VAIK + L+ K E+ ++ + HPNIVAL
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
+ S + R R+ +Q+ A+ Y+H+ +
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL--------IFQVLDAVKYLHD-L 135
Query: 204 GICHRDIKPQNLLVKG-EPNVSYICSRY--------------------YRAPELIFGATE 242
GI HRD+KP+NLL + + + S + Y APE +
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE-VLAQKP 194
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV---LGTPTREEIKCMNPNY-- 297
Y+ A+D WS G + LL G P F E+ +I+K +P ++I ++
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 298 --------TEFKFPQIKPHPW 310
F Q HPW
Sbjct: 255 HLMEKDPEKRFTCEQALQHPW 275
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +ETG A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 69 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 128
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 129 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 179
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 238
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 239 AVDWWALGVLIYEMAAGYPPF 259
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +ETG A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 159
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 218
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF 239
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 104/261 (39%), Gaps = 49/261 (18%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIK----KVLQDKRYK-NRELQIMQMLDHPNIVALKHC 143
V+GTG+F V A+ + T ++VAIK + L+ K E+ ++ + HPNIVAL
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
+ S + R R+ +Q+ A+ Y+H+ +
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL--------IFQVLDAVKYLHD-L 135
Query: 204 GICHRDIKPQNLLVKG-EPNVSYICSRY--------------------YRAPELIFGATE 242
GI HRD+KP+NLL + + + S + Y APE +
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE-VLAQKP 194
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV---LGTPTREEIKCMNPNY-- 297
Y+ A+D WS G + LL G P F E+ +I+K +P ++I ++
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 298 --------TEFKFPQIKPHPW 310
F Q HPW
Sbjct: 255 HLMEKDPEKRFTCEQALQHPW 275
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +ETG A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 41 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 100
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 101 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 151
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 210
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 211 AVDWWALGVLIYEMAAGYPPF 231
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 104/261 (39%), Gaps = 49/261 (18%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIK----KVLQDKRYK-NRELQIMQMLDHPNIVALKHC 143
V+GTG+F V A+ + T ++VAIK + L+ K E+ ++ + HPNIVAL
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
+ S + R R+ +Q+ A+ Y+H+ +
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL--------IFQVLDAVKYLHD-L 135
Query: 204 GICHRDIKPQNLLVKG-EPNVSYICSRY--------------------YRAPELIFGATE 242
GI HRD+KP+NLL + + + S + Y APE +
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE-VLAQKP 194
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV---LGTPTREEIKCMNPNY-- 297
Y+ A+D WS G + LL G P F E+ +I+K +P ++I ++
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 298 --------TEFKFPQIKPHPW 310
F Q HPW
Sbjct: 255 HLMEKDPEKRFTCEQALQHPW 275
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +ETG A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 159
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 218
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF 239
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 118/283 (41%), Gaps = 65/283 (22%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKRYKN--RELQIMQMLDHPNIVALK 141
+G GSFG V + +T ++ A+K K ++ +N +ELQIMQ L+HP +V L
Sbjct: 22 AIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLW 81
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIY----VKLYTYQICRALA 197
+ F D V+ + R H + + + VKL+ ++ AL
Sbjct: 82 YSFQDEED------------MFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALD 129
Query: 198 YIHNCIGICHRDIKPQNLLVKGEPNV------------------SYICSRYYRAPELIFG 239
Y+ N I HRD+KP N+L+ +V + ++ Y APE+
Sbjct: 130 YLQNQ-RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSS 188
Query: 240 --ATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTP--------TREE 289
Y+ A+D WS G ELL G+ + S EI+ T ++E
Sbjct: 189 RKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS-KEIVHTFETTVVTYPSAWSQEM 247
Query: 290 I----KCMNPN----YTEFK----FPQIKPHPWHKVFQKRLPP 320
+ K + PN +++ FP + W VFQKRL P
Sbjct: 248 VSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINWDAVFQKRLIP 290
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +ETG A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 159
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 218
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF 239
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 31/196 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKR--YKN---RELQIMQMLDHPNIVALKHCF 144
+G G+ GVV + + R +G I+A K + + + +N RELQ++ + P IV F
Sbjct: 24 LGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 83
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+S + +++++ + RI + + + + + R LAY+
Sbjct: 84 YSDGE----ISICMEHMDGGSLDQVLKEAKRIPEEI----LGKVSIAVLRGLAYLREKHQ 135
Query: 205 ICHRDIKPQNLLV--KGEPNV---------------SYICSRYYRAPELIFGATEYTTAI 247
I HRD+KP N+LV +GE + S++ +R Y APE + G T Y+
Sbjct: 136 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQG-THYSVQS 194
Query: 248 DIWSTGCVMAELLLGQ 263
DIWS G + EL +G+
Sbjct: 195 DIWSMGLSLVELAVGR 210
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 120/294 (40%), Gaps = 59/294 (20%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-----NRELQIMQMLDHPNIV 138
+I + +G+G+FG V + R +G IK + +D+ E+++++ LDHPNI+
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
+ F D + RI +R + + YV Q+ ALAY
Sbjct: 84 KIFEVF---EDYHNMYIVMETCEGGELLERIVSAQAR-GKALSEGYVAELMKQMMNALAY 139
Query: 199 IHNCIGICHRDIKPQNLLVK---------------------GEPNVSYICSRYYRAPELI 237
H+ + H+D+KP+N+L + E + + + Y APE+
Sbjct: 140 FHSQ-HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVF 198
Query: 238 FGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 297
+ T DIWS G VM LL G F G S L E+ +++ PNY
Sbjct: 199 --KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTS----LEEV--------QQKATYKEPNY 244
Query: 298 TEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDE 351
+ +P L P+AVDL+ + P R +A + H +F +
Sbjct: 245 A----VECRP----------LTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 123/304 (40%), Gaps = 77/304 (25%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKR--YKNRELQIMQMLDHPNIVALK 141
++G GSF V A+ T AIK ++++ + Y RE +M LDHP V L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 97
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+F+ D N Y R + YT +I AL Y+H
Sbjct: 98 --YFTFQDDEKLYFGLSYAK-----NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------------YICSRYYRAPELIFGA 240
GI HRD+KP+N+L+ + ++ ++ + Y +PEL+
Sbjct: 151 K-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYT 298
+ ++ D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 210 SACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL----------------- 249
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRF--FQYSPNLRCTALEAC----VHPFFDEL 352
E+ FP+ + P+A DLV + + L C +E HPFF+ +
Sbjct: 250 EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
Query: 353 RDPN 356
N
Sbjct: 298 TWEN 301
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 123/304 (40%), Gaps = 77/304 (25%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKR--YKNRELQIMQMLDHPNIVALK 141
++G GSF V A+ T AIK ++++ + Y RE +M LDHP V L
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 95
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+F+ D N Y R + YT +I AL Y+H
Sbjct: 96 --YFTFQDDEKLYFGLSYAK-----NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------------YICSRYYRAPELIFGA 240
GI HRD+KP+N+L+ + ++ ++ + Y +PEL+
Sbjct: 149 K-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYT 298
+ ++ D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 208 SACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL----------------- 247
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRF--FQYSPNLRCTALEAC----VHPFFDEL 352
E+ FP+ + P+A DLV + + L C +E HPFF+ +
Sbjct: 248 EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
Query: 353 RDPN 356
N
Sbjct: 296 TWEN 299
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 123/304 (40%), Gaps = 77/304 (25%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKR--YKNRELQIMQMLDHPNIVALK 141
++G GSF V A+ T AIK ++++ + Y RE +M LDHP V L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 97
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+F+ D N Y R + YT +I AL Y+H
Sbjct: 98 --YFTFQDDEKLYFGLSYAK-----NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------------YICSRYYRAPELIFGA 240
GI HRD+KP+N+L+ + ++ ++ + Y +PEL+
Sbjct: 151 K-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYT 298
+ ++ D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 210 SACKSS-DLWALGCIIYQLVAGLP--PFRAGNEGLIFAKIIKL----------------- 249
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRF--FQYSPNLRCTALEAC----VHPFFDEL 352
E+ FP+ + P+A DLV + + L C +E HPFF+ +
Sbjct: 250 EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
Query: 353 RDPN 356
N
Sbjct: 298 TWEN 301
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 123/304 (40%), Gaps = 77/304 (25%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKR--YKNRELQIMQMLDHPNIVALK 141
++G GSF V A+ T AIK ++++ + Y RE +M LDHP V L
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 95
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+F+ D N Y R + YT +I AL Y+H
Sbjct: 96 --YFTFQDDEKLYFGLSYAK-----NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------------YICSRYYRAPELIFGA 240
GI HRD+KP+N+L+ + ++ ++ + Y +PEL+
Sbjct: 149 K-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYT 298
+ ++ D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 208 SACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL----------------- 247
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRF--FQYSPNLRCTALEAC----VHPFFDEL 352
E+ FP+ + P+A DLV + + L C +E HPFF+ +
Sbjct: 248 EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
Query: 353 RDPN 356
N
Sbjct: 296 TWEN 299
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 123/304 (40%), Gaps = 77/304 (25%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKR--YKNRELQIMQMLDHPNIVALK 141
++G GSF V A+ T AIK ++++ + Y RE +M LDHP V L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 97
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+F+ D N Y R + YT +I AL Y+H
Sbjct: 98 --YFTFQDDEKLYFGLSYAK-----NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------------YICSRYYRAPELIFGA 240
GI HRD+KP+N+L+ + ++ ++ + Y +PEL+
Sbjct: 151 K-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYT 298
+ ++ D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 210 SACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL----------------- 249
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRF--FQYSPNLRCTALEAC----VHPFFDEL 352
E+ FP+ + P+A DLV + + L C +E HPFF+ +
Sbjct: 250 EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
Query: 353 RDPN 356
N
Sbjct: 298 TWEN 301
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 121/304 (39%), Gaps = 65/304 (21%)
Query: 83 SYIAEHV-VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR------ELQIMQMLDHP 135
SY+ + +G GS G+V A R +G++VA+KK+ D R + R E+ IM+ H
Sbjct: 31 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHE 88
Query: 136 NIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRA 195
N+V + + + + V H RM + + +A
Sbjct: 89 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVT---------HTRMNEEQIAAVCLAVLQA 139
Query: 196 LAYIHNCIGICHRDIKPQNLLVKGEPNVSY----ICSR---------------YYRAPEL 236
L+ +H G+ HRDIK ++L+ + V C++ Y+ APEL
Sbjct: 140 LSVLH-AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPEL 198
Query: 237 IFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 296
I Y +DIWS G ++ E++ G+P + E P + +K + N
Sbjct: 199 I-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPLKAMKMIRDN 242
Query: 297 YTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
P++K HKV P + R P R TA E HPF + P
Sbjct: 243 LP----PRLK--NLHKV-----SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPA 291
Query: 357 TRLP 360
+ +P
Sbjct: 292 SIVP 295
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 122/307 (39%), Gaps = 65/307 (21%)
Query: 83 SYIAEHV-VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR------ELQIMQMLDHP 135
SY+ + +G GS G+V A R +G++VA+KK+ D R + R E+ IM+ H
Sbjct: 20 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHE 77
Query: 136 NIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRA 195
N+V + + + + V H RM + + +A
Sbjct: 78 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVT---------HTRMNEEQIAAVCLAVLQA 128
Query: 196 LAYIHNCIGICHRDIKPQNLLVKGEPNVSY----ICSR---------------YYRAPEL 236
L+ +H G+ HRDIK ++L+ + V C++ Y+ APEL
Sbjct: 129 LSVLH-AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPEL 187
Query: 237 IFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 296
I Y +DIWS G ++ E++ G+P + E P + +K + N
Sbjct: 188 I-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPLKAMKMIRDN 231
Query: 297 YTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
P++K HKV P + R P R TA E HPF + P
Sbjct: 232 LP----PRLK--NLHKV-----SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPA 280
Query: 357 TRLPNGR 363
+ +P R
Sbjct: 281 SIVPLMR 287
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 123/304 (40%), Gaps = 77/304 (25%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKR--YKNRELQIMQMLDHPNIVALK 141
++G GSF V A+ T AIK ++++ + Y RE +M LDHP V L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 97
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+F+ D N Y R + YT +I AL Y+H
Sbjct: 98 --YFTFQDDEKLYFGLSYAK-----NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------------YICSRYYRAPELIFGA 240
GI HRD+KP+N+L+ + ++ ++ + Y +PEL+
Sbjct: 151 K-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYT 298
+ ++ D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 210 SACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL----------------- 249
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRF--FQYSPNLRCTALEAC----VHPFFDEL 352
E+ FP+ + P+A DLV + + L C +E HPFF+ +
Sbjct: 250 EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
Query: 353 RDPN 356
N
Sbjct: 298 TWEN 301
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 121/304 (39%), Gaps = 65/304 (21%)
Query: 83 SYIAEHV-VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR------ELQIMQMLDHP 135
SY+ + +G GS G+V A R +G++VA+KK+ D R + R E+ IM+ H
Sbjct: 24 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHE 81
Query: 136 NIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRA 195
N+V + + + + V H RM + + +A
Sbjct: 82 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVT---------HTRMNEEQIAAVCLAVLQA 132
Query: 196 LAYIHNCIGICHRDIKPQNLLVKGEPNVSY----ICSR---------------YYRAPEL 236
L+ +H G+ HRDIK ++L+ + V C++ Y+ APEL
Sbjct: 133 LSVLH-AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPEL 191
Query: 237 IFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 296
I Y +DIWS G ++ E++ G+P + E P + +K + N
Sbjct: 192 I-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPLKAMKMIRDN 235
Query: 297 YTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
P++K HKV P + R P R TA E HPF + P
Sbjct: 236 LP----PRLK--NLHKV-----SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPA 284
Query: 357 TRLP 360
+ +P
Sbjct: 285 SIVP 288
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +E+G A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 69 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 128
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 129 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 179
Query: 202 CIGICHRDIKPQNLLVKGEPNVSY---------------ICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIIL-SKGYNK 238
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 239 AVDWWALGVLIYEMAAGYPPF 259
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 123/304 (40%), Gaps = 77/304 (25%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKR--YKNRELQIMQMLDHPNIVALK 141
++G GSF V A+ T AIK ++++ + Y RE +M LDHP V L
Sbjct: 40 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 98
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+F+ D N Y R + YT +I AL Y+H
Sbjct: 99 --YFTFQDDEKLYFGLSYAK-----NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 151
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------------YICSRYYRAPELIFGA 240
GI HRD+KP+N+L+ + ++ ++ + Y +PEL+
Sbjct: 152 K-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 210
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYT 298
+ ++ D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 211 SACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL----------------- 250
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRF--FQYSPNLRCTALEAC----VHPFFDEL 352
E+ FP+ + P+A DLV + + L C +E HPFF+ +
Sbjct: 251 EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 298
Query: 353 RDPN 356
N
Sbjct: 299 TWEN 302
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K ETG A+K + + K K +E++ I+Q ++ P +V L+
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NL++ + + +C Y APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +ETG A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 159
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NL++ + + +C Y APE+I + Y
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 218
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF 239
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 123/304 (40%), Gaps = 77/304 (25%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKR--YKNRELQIMQMLDHPNIVALK 141
++G GSF V A+ T AIK ++++ + Y RE +M LDHP V L
Sbjct: 21 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 79
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+F+ D N Y R + YT +I AL Y+H
Sbjct: 80 --YFTFQDDEKLYFGLSYAK-----NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 132
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------------YICSRYYRAPELIFGA 240
GI HRD+KP+N+L+ + ++ ++ + Y +PEL+
Sbjct: 133 K-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 191
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYT 298
+ ++ D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 192 SACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL----------------- 231
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRF--FQYSPNLRCTALEAC----VHPFFDEL 352
E+ FP+ + P+A DLV + + L C +E HPFF+ +
Sbjct: 232 EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 279
Query: 353 RDPN 356
N
Sbjct: 280 TWEN 283
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 121/304 (39%), Gaps = 65/304 (21%)
Query: 83 SYIAEHV-VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR------ELQIMQMLDHP 135
SY+ + +G GS G+V A R +G++VA+KK+ D R + R E+ IM+ H
Sbjct: 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHE 131
Query: 136 NIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRA 195
N+V + + + + V H RM + + +A
Sbjct: 132 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVT---------HTRMNEEQIAAVCLAVLQA 182
Query: 196 LAYIHNCIGICHRDIKPQNLLVKGEPNVSY----ICSR---------------YYRAPEL 236
L+ +H G+ HRDIK ++L+ + V C++ Y+ APEL
Sbjct: 183 LSVLH-AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPEL 241
Query: 237 IFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 296
I Y +DIWS G ++ E++ G+P + E P + +K + N
Sbjct: 242 I-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPLKAMKMIRDN 285
Query: 297 YTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
P++K HKV P + R P R TA E HPF + P
Sbjct: 286 LP----PRLK--NLHKV-----SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPA 334
Query: 357 TRLP 360
+ +P
Sbjct: 335 SIVP 338
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K ETG A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 108 FSFKDNSNLYMVMEYMPGGDMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +E+G A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K ETG A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 108 FSFKDNSNLYMVMEYMPGGDMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K ETG A+K + + K K +E++ I+Q ++ P +V L+
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NL++ + + +C Y APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 121/304 (39%), Gaps = 65/304 (21%)
Query: 83 SYIAEHV-VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR------ELQIMQMLDHP 135
SY+ + +G GS G+V A R +G++VA+KK+ D R + R E+ IM+ H
Sbjct: 29 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHE 86
Query: 136 NIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRA 195
N+V + + + + V H RM + + +A
Sbjct: 87 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVT---------HTRMNEEQIAAVCLAVLQA 137
Query: 196 LAYIHNCIGICHRDIKPQNLLVKGEPNVSY----ICSR---------------YYRAPEL 236
L+ +H G+ HRDIK ++L+ + V C++ Y+ APEL
Sbjct: 138 LSVLH-AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPEL 196
Query: 237 IFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 296
I Y +DIWS G ++ E++ G+P + E P + +K + N
Sbjct: 197 I-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPLKAMKMIRDN 240
Query: 297 YTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
P++K HKV P + R P R TA E HPF + P
Sbjct: 241 LP----PRLK--NLHKV-----SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPA 289
Query: 357 TRLP 360
+ +P
Sbjct: 290 SIVP 293
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 123/304 (40%), Gaps = 77/304 (25%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKR--YKNRELQIMQMLDHPNIVALK 141
++G GSF V A+ T AIK ++++ + Y RE +M LDHP V L
Sbjct: 14 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 72
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+F+ D N Y R + YT +I AL Y+H
Sbjct: 73 --YFTFQDDEKLYFGLSYAK-----NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 125
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------------YICSRYYRAPELIFGA 240
GI HRD+KP+N+L+ + ++ ++ + Y +PEL+
Sbjct: 126 K-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 184
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYT 298
+ ++ D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 185 SACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL----------------- 224
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRF--FQYSPNLRCTALEAC----VHPFFDEL 352
E+ FP+ + P+A DLV + + L C +E HPFF+ +
Sbjct: 225 EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 272
Query: 353 RDPN 356
N
Sbjct: 273 TWEN 276
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +E+G A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +E+G A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 123/304 (40%), Gaps = 77/304 (25%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKR--YKNRELQIMQMLDHPNIVALK 141
++G GSF V A+ T AIK ++++ + Y RE +M LDHP V L
Sbjct: 16 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 74
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+F+ D N Y R + YT +I AL Y+H
Sbjct: 75 --YFTFQDDEKLYFGLSYAK-----NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 127
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------------YICSRYYRAPELIFGA 240
GI HRD+KP+N+L+ + ++ ++ + Y +PEL+
Sbjct: 128 K-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 186
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYT 298
+ ++ D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 187 SACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL----------------- 226
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRF--FQYSPNLRCTALEAC----VHPFFDEL 352
E+ FP+ + P+A DLV + + L C +E HPFF+ +
Sbjct: 227 EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 274
Query: 353 RDPN 356
N
Sbjct: 275 TWEN 278
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +E+G A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +E+G A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 49 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 109 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 159
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 218
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF 239
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +E+G A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +E+G A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVSYICSRY----------------YRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + + Y APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +E+G A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVSYICSRY----------------YRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + + Y APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K ETG A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +E+G A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 35 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 94
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H+
Sbjct: 95 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLHS 146
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 147 -LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 204
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 205 AVDWWALGVLIYEMAAGYPPF 225
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K ETG A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 122/300 (40%), Gaps = 77/300 (25%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKR--YKNRELQIMQMLDHPNIVALK 141
++G GSF V A+ T AIK ++++ + Y RE +M LDHP V L
Sbjct: 17 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 75
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+F+ D N Y R + YT +I AL Y+H
Sbjct: 76 --YFTFQDDEKLYFGLSYAK-----NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 128
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------------YICSRYYRAPELIFGA 240
GI HRD+KP+N+L+ + ++ ++ + Y +PEL+
Sbjct: 129 K-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 187
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYT 298
+ ++ D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 188 SACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL----------------- 227
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRF--FQYSPNLRCTALEAC----VHPFFDEL 352
E+ FP+ + P+A DLV + + L C +E HPFF+ +
Sbjct: 228 EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 275
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 123/304 (40%), Gaps = 77/304 (25%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKR--YKNRELQIMQMLDHPNIVALK 141
++G GSF V A+ T AIK ++++ + Y RE +M LDHP V L
Sbjct: 36 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 94
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+F+ D N Y R + YT +I AL Y+H
Sbjct: 95 --YFTFQDDEKLYFGLSYAK-----NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 147
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------------YICSRYYRAPELIFGA 240
GI HRD+KP+N+L+ + ++ ++ + Y +PEL+
Sbjct: 148 K-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 206
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYT 298
+ ++ D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 207 SACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL----------------- 246
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRF--FQYSPNLRCTALEAC----VHPFFDEL 352
E+ FP+ + P+A DLV + + L C +E HPFF+ +
Sbjct: 247 EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 294
Query: 353 RDPN 356
N
Sbjct: 295 TWEN 298
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 123/304 (40%), Gaps = 77/304 (25%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKR--YKNRELQIMQMLDHPNIVALK 141
++G GSF V A+ T AIK ++++ + Y RE +M LDHP V L
Sbjct: 15 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 73
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+F+ D N Y R + YT +I AL Y+H
Sbjct: 74 --YFTFQDDEKLYFGLSYAK-----NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 126
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------------YICSRYYRAPELIFGA 240
GI HRD+KP+N+L+ + ++ ++ + Y +PEL+
Sbjct: 127 K-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 185
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYT 298
+ ++ D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 186 SACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL----------------- 225
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRF--FQYSPNLRCTALEAC----VHPFFDEL 352
E+ FP+ + P+A DLV + + L C +E HPFF+ +
Sbjct: 226 EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 273
Query: 353 RDPN 356
N
Sbjct: 274 TWEN 277
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 126/321 (39%), Gaps = 61/321 (19%)
Query: 89 VVGTGSFGVVFQ-AKCRETGEIVAIKKVLQDKRYKNR---ELQIMQMLDH--PNIVALKH 142
+G G+FG V Q R G VA+K + ++YK E+ +++ ++ P+ L
Sbjct: 40 TLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPDNKNLCV 99
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F D T + + N + P+ V+ +Q+C+A+ ++H+
Sbjct: 100 QMFDWFDYHGHMCISFELLGLSTFDFLKDNN---YLPYPIHQVRHMAFQLCQAVKFLHDN 156
Query: 203 IGICHRDIKPQNLL-VKGEPNVSY----------------------------------IC 227
+ H D+KP+N+L V + ++Y +
Sbjct: 157 -KLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFDHEHHSTIVS 215
Query: 228 SRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLG-TPT 286
+R+YRAPE+I ++ D+WS GC++ E +G LF + L + ++LG P+
Sbjct: 216 TRHYRAPEVILELG-WSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILGPIPS 274
Query: 287 REEIKCMNPNY--------------TEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQY 332
R K Y + KP + + + DL+ +Y
Sbjct: 275 RMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEHHQLFDLIESMLEY 334
Query: 333 SPNLRCTALEACVHPFFDELR 353
P R T EA HPFF LR
Sbjct: 335 EPAKRLTLGEALQHPFFARLR 355
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 122/323 (37%), Gaps = 79/323 (24%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVL----QDKRYKNRELQIMQMLDHPNIVALKHCFF 145
+GTG+FGVV + R TG A K V+ DK +E+Q M +L HP +V L F
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF- 223
Query: 146 STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGI 205
D ++A ++++ + + Y++ Q+C+ L ++H
Sbjct: 224 --EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR----QVCKGLCHMHEN-NY 276
Query: 206 CHRDIKPQNLLVKG-----------------EPNVSY---ICSRYYRAPELIFGA-TEYT 244
H D+KP+N++ +P S + + APE+ G Y
Sbjct: 277 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYY 336
Query: 245 TAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 304
T D+WS G + LL G F GE+ + L +K + N + F
Sbjct: 337 T--DMWSVGVLSYILLSGLSPFGGENDDETL------------RNVKSCDWNMDDSAFSG 382
Query: 305 IKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP--NTRLPNG 362
I + D + + PN R T +A HP+ P ++++P+
Sbjct: 383 IS-------------EDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSS 429
Query: 363 R-----------------PLPPL 368
R PLPPL
Sbjct: 430 RYTKIRDSIKTKYDAWPEPLPPL 452
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 120/304 (39%), Gaps = 65/304 (21%)
Query: 83 SYIAEHV-VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR------ELQIMQMLDHP 135
SY+ + +G GS G+V A R +G++VA+KK+ D R + R E+ IM+ H
Sbjct: 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHE 208
Query: 136 NIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRA 195
N+V + + + + V H RM + + +A
Sbjct: 209 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVT---------HTRMNEEQIAAVCLAVLQA 259
Query: 196 LAYIHNCIGICHRDIKPQNLLVKGEPNVS-------------------YICSRYYRAPEL 236
L+ +H G+ HRDIK ++L+ + V + + Y+ APEL
Sbjct: 260 LSVLH-AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPEL 318
Query: 237 IFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 296
I Y +DIWS G ++ E++ G+P + E P + +K + N
Sbjct: 319 I-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPLKAMKMIRDN 362
Query: 297 YTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 356
P++K HKV P + R P R TA E HPF + P
Sbjct: 363 LP----PRLK--NLHKVS-----PSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPA 411
Query: 357 TRLP 360
+ +P
Sbjct: 412 SIVP 415
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 122/323 (37%), Gaps = 79/323 (24%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVL----QDKRYKNRELQIMQMLDHPNIVALKHCFF 145
+GTG+FGVV + R TG A K V+ DK +E+Q M +L HP +V L F
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF- 117
Query: 146 STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGI 205
D ++A ++++ + + Y++ Q+C+ L ++H
Sbjct: 118 --EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR----QVCKGLCHMHEN-NY 170
Query: 206 CHRDIKPQNLLVKG-----------------EPNVSY---ICSRYYRAPELIFGA-TEYT 244
H D+KP+N++ +P S + + APE+ G Y
Sbjct: 171 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYY 230
Query: 245 TAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 304
T D+WS G + LL G F GE+ + L +K + N + F
Sbjct: 231 T--DMWSVGVLSYILLSGLSPFGGENDDETL------------RNVKSCDWNMDDSAFSG 276
Query: 305 IKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP--NTRLPNG 362
I + D + + PN R T +A HP+ P ++++P+
Sbjct: 277 IS-------------EDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSS 323
Query: 363 R-----------------PLPPL 368
R PLPPL
Sbjct: 324 RYTKIRDSIKTKYDAWPEPLPPL 346
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 123/299 (41%), Gaps = 59/299 (19%)
Query: 75 NGNSKQKVS--YIAEHVVGTGSFGVVFQAKCRETGEIVAIK--KVLQDKRYKNRELQIMQ 130
+G+++ +S + E +G G+ +V++ K + T + A+K K DK+ E+ ++
Sbjct: 44 DGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLL 103
Query: 131 MLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTY 190
L HPNI+ LK F + T+ +RI +R VK
Sbjct: 104 RLSHPNIIKLKEIFETPTE---ISLVLELVTGGELFDRIVEK-GYYSERDAADAVK---- 155
Query: 191 QICRALAYIHNCIGICHRDIKPQNLL--------------------VKGEPNVSYICSR- 229
QI A+AY+H GI HRD+KP+NLL V+ + + +C
Sbjct: 156 QILEAVAYLHEN-GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTP 214
Query: 230 YYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 289
Y APE++ G Y +D+WS G + LL G F E G DQ + R
Sbjct: 215 GYCAPEILRGCA-YGPEVDMWSVGIITYILLCGFEPFYDERG-DQFM---------FRRI 263
Query: 290 IKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ C E+ F PW + A DLV + P R T +A HP+
Sbjct: 264 LNC------EYYFIS----PW----WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPW 308
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +ETG A+K + + K K ++++ I Q ++ P +V L+
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLE 108
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 109 FSFKDNSNLYMVLEYAPGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 159
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 218
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF 239
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 116/272 (42%), Gaps = 44/272 (16%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ +++ IVA+K + + + K RE++I L HPNI+ L +
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F+ D+ + ++ + QR I +L AL Y H
Sbjct: 91 YFY---DRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEEL-----ADALMYCHGK 142
Query: 203 IGICHRDIKPQNLLVKG--------------EPNV--SYICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ P++ +C Y PE+I G +
Sbjct: 143 -KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRM-HNE 200
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV-----LGTPTREE---IKCMNPNY 297
+D+W G + ELL+G P F S + I+KV PT + K + N
Sbjct: 201 KVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGAQDLISKLLRHNP 260
Query: 298 TE-FKFPQIKPHPWHKVFQKR-LPPEAVDLVC 327
+E Q+ HPW + +R LPP A+ V
Sbjct: 261 SERLPLAQVSAHPWVRANSRRVLPPSALQSVA 292
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 39/202 (19%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQMLDHPNIVALKH 142
+G GSFG V+ A+ E+VAIKK+ + N +E++ +Q L HPN + +
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPL--IYVKLYTYQICRALAYIH 200
C+ A + +H++ PL + + T+ + LAY+H
Sbjct: 122 CYLREHTAWLVMEYCLGS---------ASDLLEVHKK-PLQEVEIAAVTHGALQGLAYLH 171
Query: 201 NCIGICHRDIKPQNLLVKGEPNV----------------SYICSRYYRAPELIFGATE-- 242
+ + HRD+K N+L+ EP + ++ + Y+ APE+I E
Sbjct: 172 SH-NMIHRDVKAGNILL-SEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQ 229
Query: 243 YTTAIDIWSTGCVMAELLLGQP 264
Y +D+WS G EL +P
Sbjct: 230 YDGKVDVWSLGITCIELAERKP 251
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K ETG A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K ETG A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K ETG A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K ETG A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 159
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 218
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF 239
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K ETG A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 159
Query: 202 CIGICHRDIKPQNLLVKGEPNVSY---------------ICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIIL-SKGYNK 218
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF 239
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K ETG A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 34 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 93
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H+
Sbjct: 94 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLHS 145
Query: 202 CIGICHRDIKPQNLLVKGEPNVSY---------------ICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 146 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIIL-SKGYNK 203
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 204 AVDWWALGVLIYEMAAGYPPF 224
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 43/228 (18%)
Query: 89 VVGTGSFGVVFQAK------CRETGEIVAIKKV---LQDKRYKNRELQIMQMLDHPNIVA 139
V+G GSFG VF K R+ + +KK ++D+ E I+ ++HP IV
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 90
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIY--VKLYTYQICRALA 197
L H F T K R ++R+ + + VK Y ++ AL
Sbjct: 91 L-HYAFQTEGKLYLILDFL---------RGGDLFTRLSKEVMFTEEDVKFYLAELALALD 140
Query: 198 YIHNCIGICHRDIKPQNLLVKGEPNV-------------------SYICSRYYRAPELIF 238
++H+ +GI +RD+KP+N+L+ E ++ S+ + Y APE++
Sbjct: 141 HLHS-LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV- 198
Query: 239 GATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV-LGTP 285
+T + D WS G +M E+L G F G+ + + I+K LG P
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 39/202 (19%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQMLDHPNIVALKH 142
+G GSFG V+ A+ E+VAIKK+ + N +E++ +Q L HPN + +
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPL--IYVKLYTYQICRALAYIH 200
C+ A + +H++ PL + + T+ + LAY+H
Sbjct: 83 CYLREHTAWLVMEYCLGS---------ASDLLEVHKK-PLQEVEIAAVTHGALQGLAYLH 132
Query: 201 NCIGICHRDIKPQNLLVKGEPNV----------------SYICSRYYRAPELIFGATE-- 242
+ + HRD+K N+L+ EP + ++ + Y+ APE+I E
Sbjct: 133 SH-NMIHRDVKAGNILL-SEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQ 190
Query: 243 YTTAIDIWSTGCVMAELLLGQP 264
Y +D+WS G EL +P
Sbjct: 191 YDGKVDVWSLGITCIELAERKP 212
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +ETG A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 41 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 100
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R + H R Y QI Y+H
Sbjct: 101 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FXEPHAR-------FYAAQIVLTFEYLH- 151
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 210
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 211 AVDWWALGVLIYEMAAGYPPF 231
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +E+G A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R ++ H R Y QI Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FAEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 39/212 (18%)
Query: 84 YIAEHV-VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR------ELQIMQMLDHPN 136
Y+A + +G GS G+V A + TG+ VA+KK+ D R + R E+ IM+ H N
Sbjct: 46 YLANFIKIGEGSTGIVCIATEKHTGKQVAVKKM--DLRKQQRRELLFNEVVIMRDYHHDN 103
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
+V + + + V H RM + + RAL
Sbjct: 104 VVDMYSSYLVGDELWVVMEFLEGGALTDIVT---------HTRMNEEQIATVCLSVLRAL 154
Query: 197 AYIHNCIGICHRDIKPQNLLVKGEPNVSY----ICSR---------------YYRAPELI 237
+Y+HN G+ HRDIK ++L+ + + C++ Y+ APE+I
Sbjct: 155 SYLHNQ-GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVI 213
Query: 238 FGATEYTTAIDIWSTGCVMAELLLGQPLFPGE 269
Y T +DIWS G ++ E++ G+P + E
Sbjct: 214 -SRLPYGTEVDIWSLGIMVIEMIDGEPPYFNE 244
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 113/298 (37%), Gaps = 57/298 (19%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQ----DKRYKNRELQIMQMLDHPNIVALKHCFF 145
+G+G+FGVV + + TG + K + DK E+ IM L HP ++ L F
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF- 117
Query: 146 STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGI 205
DK +RIA ++ + + Y++ Q C L ++H I
Sbjct: 118 --EDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMR----QACEGLKHMHEH-SI 170
Query: 206 CHRDIKPQNLLVKGEPNVSYICSRYYRA----PELIFGATEYTTAI-------------- 247
H DIKP+N++ + + S + A P+ I T T
Sbjct: 171 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFY 230
Query: 248 -DIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIK 306
D+W+ G + LL G F GE ++ L + +K + + E F +
Sbjct: 231 TDMWAIGVLGYVLLSGLSPFAGEDDLETL------------QNVKRCDWEFDEDAFSSVS 278
Query: 307 PHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFD-ELRDPNTRLPNGR 363
P EA D + Q P R T +A HP+ + + +R+P+ R
Sbjct: 279 P-------------EAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSR 323
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 122/304 (40%), Gaps = 77/304 (25%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKR--YKNRELQIMQMLDHPNIVALK 141
++G GSF A+ T AIK ++++ + Y RE +M LDHP V L
Sbjct: 37 ILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 95
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+F+ D N Y R + YT +I AL Y+H
Sbjct: 96 --YFTFQDDEKLYFGLSYAK-----NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------------YICSRYYRAPELIFGA 240
GI HRD+KP+N+L+ + ++ ++ + Y +PEL+
Sbjct: 149 K-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYT 298
+ ++ D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 208 SACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL----------------- 247
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRF--FQYSPNLRCTALEAC----VHPFFDEL 352
E+ FP+ + P+A DLV + + L C +E HPFF+ +
Sbjct: 248 EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
Query: 353 RDPN 356
N
Sbjct: 296 TWEN 299
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K ETG A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NL++ + + +C Y APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +E+G A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ ++ G P F
Sbjct: 218 AVDWWALGVLIYQMAAGYPPF 238
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K ETG A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NL++ + + +C Y APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +E+G A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NL++ + + +C Y APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIII-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 117/288 (40%), Gaps = 61/288 (21%)
Query: 87 EHVVGTGSFGVVFQAKCRETGEIVAIK----KVLQDKRYK-NRELQIMQMLDHPNIVALK 141
+ +GTG+F V A+ + TG++ A+K K L+ K E+ +++ + H NIVAL+
Sbjct: 27 KETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALE 86
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+ S + + + + LI Q+ A+ Y+H
Sbjct: 87 DIYESPNHLYLVMQLVSGGELFDRI--VEKGFYTEKDASTLIR------QVLDAVYYLHR 138
Query: 202 CIGICHRDIKPQNLL-------------------VKGEPNV-SYICSR-YYRAPELIFGA 240
+GI HRD+KP+NLL ++G+ +V S C Y APE +
Sbjct: 139 -MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPE-VLAQ 196
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
Y+ A+D WS G + LL G P F E+ +I+K E+
Sbjct: 197 KPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILK-----------------AEY 239
Query: 301 KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+F P+ W + A D + + PN R T +A HP+
Sbjct: 240 EFDS--PY-WDDI-----SDSAKDFIRNLMEKDPNKRYTCEQAARHPW 279
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 43/228 (18%)
Query: 89 VVGTGSFGVVFQAK------CRETGEIVAIKKV---LQDKRYKNRELQIMQMLDHPNIVA 139
V+G GSFG VF K R+ + +KK ++D+ E I+ ++HP IV
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 90
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIY--VKLYTYQICRALA 197
L H F T K R ++R+ + + VK Y ++ AL
Sbjct: 91 L-HYAFQTEGKLYLILDFL---------RGGDLFTRLSKEVMFTEEDVKFYLAELALALD 140
Query: 198 YIHNCIGICHRDIKPQNLLVKGEPNV-------------------SYICSRYYRAPELIF 238
++H+ +GI +RD+KP+N+L+ E ++ S+ + Y APE++
Sbjct: 141 HLHS-LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV- 198
Query: 239 GATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV-LGTP 285
+T + D WS G +M E+L G F G+ + + I+K LG P
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +E+G A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 69 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 128
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R + H R Y QI Y+H
Sbjct: 129 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FXEPHAR-------FYAAQIVLTFEYLH- 179
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 238
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 239 AVDWWALGVLIYEMAAGYPPF 259
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 43/228 (18%)
Query: 89 VVGTGSFGVVFQAK------CRETGEIVAIKKV---LQDKRYKNRELQIMQMLDHPNIVA 139
V+G GSFG VF K R+ + +KK ++D+ E I+ ++HP IV
Sbjct: 32 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 91
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIY--VKLYTYQICRALA 197
L H F T K R ++R+ + + VK Y ++ AL
Sbjct: 92 L-HYAFQTEGKLYLILDFL---------RGGDLFTRLSKEVMFTEEDVKFYLAELALALD 141
Query: 198 YIHNCIGICHRDIKPQNLLVKGEPNV-------------------SYICSRYYRAPELIF 238
++H+ +GI +RD+KP+N+L+ E ++ S+ + Y APE++
Sbjct: 142 HLHS-LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV- 199
Query: 239 GATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV-LGTP 285
+T + D WS G +M E+L G F G+ + + I+K LG P
Sbjct: 200 NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 247
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 134/309 (43%), Gaps = 75/309 (24%)
Query: 85 IAEHVVGTGSFG-VVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQML----DHPNIVA 139
++E ++G GS G VVFQ + G VA+K++L D + + L +++L DHPN++
Sbjct: 36 VSEKILGYGSSGTVVFQGSFQ--GRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVI- 90
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTY-QICRALAY 198
++ TTD+ + ++N S + ++ Y + QI +A+
Sbjct: 91 -RYYCSETTDRFLYIALELCNLNLQDLVE-SKNVSDENLKLQKEYNPISLLRQIASGVAH 148
Query: 199 IHNCIGICHRDIKPQNLLVK-----------GEPNVSYICSRY----------------- 230
+H+ + I HRD+KPQN+LV G N+ + S +
Sbjct: 149 LHS-LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNL 207
Query: 231 --------YRAPELIFGATE--YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIK 280
+RAPEL+ +T+ T +IDI+S GCV +L + P + II+
Sbjct: 208 NNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY-YILSKGKHPFGDKYSRESNIIR 266
Query: 281 VLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTA 340
G + +E+KC++ + L EA DL+ + + P R TA
Sbjct: 267 --GIFSLDEMKCLH--------------------DRSLIAEATDLISQMIDHDPLKRPTA 304
Query: 341 LEACVHPFF 349
++ HP F
Sbjct: 305 MKVLRHPLF 313
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 118/301 (39%), Gaps = 78/301 (25%)
Query: 83 SYIAEHVVGTGSFGVVFQAKCRETG-----EIVAIKKVLQDK-RYKN------------- 123
SY +G+G++G V C+E I IKK DK RY +
Sbjct: 37 SYFKVRKLGSGAYGEVLL--CKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIY 94
Query: 124 RELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLI 183
E+ +++ LDHPNI+ L F DK +I N + +
Sbjct: 95 NEISLLKSLDHPNIIKLFDVF---EDKKYFYLVTEFYEGGELFEQII-NRHKFDECDAAN 150
Query: 184 YVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGEPNV-------------------- 223
+K QI + Y+H I HRDIKP+N+L++ + ++
Sbjct: 151 IMK----QILSGICYLHKH-NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL 205
Query: 224 -SYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVL 282
+ + YY APE++ +Y D+WS G +M LL G P F G++ D + ++ K
Sbjct: 206 RDRLGTAYYIAPEVL--KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEK-- 261
Query: 283 GTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALE 342
Y +F + W K + EA +L+ Y N RCTA E
Sbjct: 262 -----------GKYYFDF-------NDW-----KNISDEAKELIKLMLTYDYNKRCTAEE 298
Query: 343 A 343
A
Sbjct: 299 A 299
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 134/309 (43%), Gaps = 75/309 (24%)
Query: 85 IAEHVVGTGSFG-VVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQML----DHPNIVA 139
++E ++G GS G VVFQ + G VA+K++L D + + L +++L DHPN++
Sbjct: 36 VSEKILGYGSSGTVVFQGSFQ--GRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVI- 90
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTY-QICRALAY 198
++ TTD+ + ++N S + ++ Y + QI +A+
Sbjct: 91 -RYYCSETTDRFLYIALELCNLNLQDLVE-SKNVSDENLKLQKEYNPISLLRQIASGVAH 148
Query: 199 IHNCIGICHRDIKPQNLLVK-----------GEPNVSYICSRY----------------- 230
+H+ + I HRD+KPQN+LV G N+ + S +
Sbjct: 149 LHS-LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNL 207
Query: 231 --------YRAPELIFGATE--YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIK 280
+RAPEL+ +T+ T +IDI+S GCV +L + P + II+
Sbjct: 208 NNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY-YILSKGKHPFGDKYSRESNIIR 266
Query: 281 VLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTA 340
G + +E+KC++ + L EA DL+ + + P R TA
Sbjct: 267 --GIFSLDEMKCLH--------------------DRSLIAEATDLISQMIDHDPLKRPTA 304
Query: 341 LEACVHPFF 349
++ HP F
Sbjct: 305 MKVLRHPLF 313
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +E+G A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R + H R Y QI Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FXEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +E+G A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R + H R Y QI Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FXEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +E+G A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 43 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 102
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R + H R Y QI Y+H
Sbjct: 103 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FXEPHAR-------FYAAQIVLTFEYLH- 153
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 154 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 212
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 213 AVDWWALGVLIYEMAAGYPPF 233
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +E+G A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVSYICSRYYR----------------APELIFGATEYTT 245
+ + +RD+KP+NLL+ + + + + APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +E+G A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R + H R Y QI Y+H+
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FXEPHAR-------FYAAQIVLTFEYLHS 159
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 160 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 121/304 (39%), Gaps = 77/304 (25%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKR--YKNRELQIMQMLDHPNIVALK 141
++G GSF V A+ T AIK ++++ + Y RE +M LDHP V L
Sbjct: 42 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 100
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+F+ D N Y R + YT +I AL Y+H
Sbjct: 101 --YFTFQDDEKLYFGLSYAK-----NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 153
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------------YICSRYYRAPELIFGA 240
GI HRD+KP+N+L+ + ++ ++ + Y +PEL+
Sbjct: 154 K-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 212
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYT 298
+ ++ D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 213 SACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL----------------- 252
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRF--FQYSPNLRCTALEAC----VHPFFDEL 352
E+ FP P+A DLV + + L C +E HPFF+ +
Sbjct: 253 EYDFPAA------------FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 300
Query: 353 RDPN 356
N
Sbjct: 301 TWEN 304
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 33/197 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKV-------LQDKRYKNRELQIMQMLDHPNIVALK 141
+GTGSFG V + R G A+K + L+ + N E ++ ++ HP I+ +
Sbjct: 13 TLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMW 72
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F D + + R QR P K Y ++C AL Y+H+
Sbjct: 73 GTF---QDAQQIFMIMDYIEGGELFSLL-----RKSQRFPNPVAKFYAAEVCLALEYLHS 124
Query: 202 CIGICHRDIKPQNLLV--------------KGEPNVSY-ICSR-YYRAPELIFGATEYTT 245
I +RD+KP+N+L+ K P+V+Y +C Y APE++ Y
Sbjct: 125 K-DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVV-STKPYNK 182
Query: 246 AIDIWSTGCVMAELLLG 262
+ID WS G ++ E+L G
Sbjct: 183 SIDWWSFGILIYEMLAG 199
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 127/339 (37%), Gaps = 95/339 (28%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK----------RYKNRELQIMQMLD 133
Y + +G GS+GVV A +T I AIK + ++K R K E+++M+ L
Sbjct: 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKT-EVRLMKKLH 86
Query: 134 HPNIVALKHCFFS--------------------------TTDKXXXXXXXXXXXXXXTVN 167
HPNI L + +T K N
Sbjct: 87 HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECN 146
Query: 168 RIARNYSRIHQRMPLIYV---KLYT---YQICRALAYIHNCIGICHRDIKPQNLLVKGEP 221
A N S R L +V KL + QI AL Y+HN GICHRDIKP+N L
Sbjct: 147 EEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN-QGICHRDIKPENFLFSTNK 205
Query: 222 N-----VSYICSR--------------------YYRAPELIFGATE-YTTAIDIWSTGCV 255
+ V + S+ Y+ APE++ E Y D WS G +
Sbjct: 206 SFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265
Query: 256 MAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQ 315
+ LL+G FPG + D + +++ +++ NPNY
Sbjct: 266 LHLLLMGAVPFPGVNDADTISQVLN-------KKLCFENPNYN----------------- 301
Query: 316 KRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRD 354
L P A DL+ + + R A+ A HP+ + D
Sbjct: 302 -VLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD 339
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K +E+G A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y AP +I + Y
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPAIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 93/198 (46%), Gaps = 35/198 (17%)
Query: 90 VGTGSFGVVFQAKCRETGEIVA-------IKKVLQDKRYKNRELQIMQMLDHPNIVALKH 142
+G G+ GVVF+ + +G ++A IK ++++ RELQ++ + P IV
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII--RELQVLHECNSPYIVGFYG 133
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F+S + +++++ + RI +++ + + + + L Y+
Sbjct: 134 AFYSDGE----ISICMEHMDGGSLDQVLKKAGRIPEQI----LGKVSIAVIKGLTYLREK 185
Query: 203 IGICHRDIKPQNLLV--KGEPNV---------------SYICSRYYRAPELIFGATEYTT 245
I HRD+KP N+LV +GE + S++ +R Y +PE + G T Y+
Sbjct: 186 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQG-THYSV 244
Query: 246 AIDIWSTGCVMAELLLGQ 263
DIWS G + E+ +G+
Sbjct: 245 QSDIWSMGLSLVEMAVGR 262
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 88/208 (42%), Gaps = 37/208 (17%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--------RELQIMQMLDHPNIVAL 140
+G G+F V A+ TG+ VA+K + DK N RE++IM++L+HPNIV L
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
F + V +Y H RM + QI A+ Y H
Sbjct: 79 ----FEVIETEKTLYLVMEYASGGEV----FDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 201 NCIGICHRDIKPQNLLVKGEPNV------------------SYICSRYYRAPELIFGATE 242
I HRD+K +NLL+ + N+ ++ S Y APEL G
Sbjct: 131 QKF-IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKY 189
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGES 270
+D+WS G ++ L+ G F G++
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 88/208 (42%), Gaps = 37/208 (17%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--------RELQIMQMLDHPNIVAL 140
+G G+F V A+ TG+ VA+K + DK N RE++IM++L+HPNIV L
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
F + V +Y H RM + QI A+ Y H
Sbjct: 79 ----FEVIETEKTLYLVMEYASGGEV----FDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 201 NCIGICHRDIKPQNLLVKGEPNV------------------SYICSRYYRAPELIFGATE 242
I HRD+K +NLL+ + N+ ++ S Y APEL G
Sbjct: 131 QKF-IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKY 189
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGES 270
+D+WS G ++ L+ G F G++
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 87/201 (43%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K ETG A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R + H R Y QI Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FXEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 87/201 (43%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K ETG A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R + H R Y QI Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FXEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 87/201 (43%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K ETG A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R + H R Y QI Y+H
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FXEPHAR-------FYAAQIVLTFEYLH- 159
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NLL+ + + +C Y APE+I + Y
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 218
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF 239
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 105/251 (41%), Gaps = 36/251 (14%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR-----ELQIMQMLDHPNIVALKHCF 144
+GTG FG V + ++TGE VAIK+ Q+ KNR E+QIM+ L+HPN+V+ +
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE-V 81
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIY--VKLYTYQICRALAYIHNC 202
K + + ++ L ++ I AL Y+H
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 141
Query: 203 IGICHRDIKPQNLLV---------------------KGEPNVSYICSRYYRAPELIFGAT 241
I HRD+KP+N+++ +GE ++ + Y APEL+
Sbjct: 142 -RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELL-EQK 199
Query: 242 EYTTAIDIWSTGCVMAELLLG-QPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
+YT +D WS G + E + G +P P Q V+ + + E I +
Sbjct: 200 KYTVTVDYWSFGTLAFECITGFRPFLPNW----QPVQWHGKVREKSNEHIVVYDDLTGAV 255
Query: 301 KFPQIKPHPWH 311
KF + P P H
Sbjct: 256 KFSSVLPTPNH 266
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 105/251 (41%), Gaps = 36/251 (14%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR-----ELQIMQMLDHPNIVALKHCF 144
+GTG FG V + ++TGE VAIK+ Q+ KNR E+QIM+ L+HPN+V+ +
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE-V 80
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIY--VKLYTYQICRALAYIHNC 202
K + + ++ L ++ I AL Y+H
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 140
Query: 203 IGICHRDIKPQNLLV---------------------KGEPNVSYICSRYYRAPELIFGAT 241
I HRD+KP+N+++ +GE ++ + Y APEL+
Sbjct: 141 -RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELL-EQK 198
Query: 242 EYTTAIDIWSTGCVMAELLLG-QPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
+YT +D WS G + E + G +P P Q V+ + + E I +
Sbjct: 199 KYTVTVDYWSFGTLAFECITGFRPFLPNW----QPVQWHGKVREKSNEHIVVYDDLTGAV 254
Query: 301 KFPQIKPHPWH 311
KF + P P H
Sbjct: 255 KFSSVLPTPNH 265
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K ETG A+K + + K K ++++ I+Q ++ P + L+
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLE 108
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 159
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NL++ + + +C Y APE+I + Y
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 218
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF 239
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 99/208 (47%), Gaps = 32/208 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKR--YKN---RELQIMQMLDHPNIVALKHCF 144
+G G+ GVVF+ + +G ++A K + + + +N RELQ++ + P IV F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+S + +++++ + RI +++ + + + + L Y+
Sbjct: 74 YSDGE----ISICMEHMDGGSLDQVLKKAGRIPEQI----LGKVSIAVIKGLTYLREKHK 125
Query: 205 ICHRDIKPQNLLV--KGEPNV---------------SYICSRYYRAPELIFGATEYTTAI 247
I HRD+KP N+LV +GE + S++ +R Y +PE + G T Y+
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQG-THYSVQS 184
Query: 248 DIWSTGCVMAELLLGQ-PLFPGESGVDQ 274
DIWS G + E+ +G+ P+ P ++ D
Sbjct: 185 DIWSMGLSLVEMAVGRYPIPPPDAKEDS 212
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K ETG A+K + + K K ++++ I+Q ++ P + L+
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLE 108
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R +S H R Y QI Y+H
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLH- 159
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NL++ + + +C Y APE+I + Y
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 218
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF 239
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 93/196 (47%), Gaps = 31/196 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKR--YKN---RELQIMQMLDHPNIVALKHCF 144
+G G+ GVVF+ + +G ++A K + + + +N RELQ++ + P IV F
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 100
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+S + +++++ + RI +++ + + + + L Y+
Sbjct: 101 YSDGE----ISICMEHMDGGSLDQVLKKAGRIPEQI----LGKVSIAVIKGLTYLREKHK 152
Query: 205 ICHRDIKPQNLLV--KGEPNV---------------SYICSRYYRAPELIFGATEYTTAI 247
I HRD+KP N+LV +GE + S++ +R Y +PE + G T Y+
Sbjct: 153 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQG-THYSVQS 211
Query: 248 DIWSTGCVMAELLLGQ 263
DIWS G + E+ +G+
Sbjct: 212 DIWSMGLSLVEMAVGR 227
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 99/212 (46%), Gaps = 31/212 (14%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKR--YKN---RELQIMQMLDHPNIVALKHCF 144
+G G+ GVVF+ + +G ++A K + + + +N RELQ++ + P IV F
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 92
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+S + +++++ + RI +++ + + + + L Y+
Sbjct: 93 YSDGE----ISICMEHMDGGSLDQVLKKAGRIPEQI----LGKVSIAVIKGLTYLREKHK 144
Query: 205 ICHRDIKPQNLLV--KGEPNV---------------SYICSRYYRAPELIFGATEYTTAI 247
I HRD+KP N+LV +GE + S++ +R Y +PE + G T Y+
Sbjct: 145 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQG-THYSVQS 203
Query: 248 DIWSTGCVMAELLLGQPLFPGESGVDQLVEII 279
DIWS G + E+ +G+ SG + E++
Sbjct: 204 DIWSMGLSLVEMAVGRYPIGSGSGSMAIFELL 235
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 120/296 (40%), Gaps = 64/296 (21%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR------ELQIMQMLDHPNIVALKHC 143
+G GS G+V A+ + +G VA+K + D R + R E+ IM+ H N+V +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVK--MMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
+ + V+++ N +I + +ALAY+H
Sbjct: 111 YLVGEELWVLMEFLQGGALTDIVSQVRLNEEQI---------ATVCEAVLQALAYLH-AQ 160
Query: 204 GICHRDIKPQNLLVKGEPNVSY----ICSR---------------YYRAPELIFGATEYT 244
G+ HRDIK ++L+ + V C++ Y+ APE+I + Y
Sbjct: 161 GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVI-SRSLYA 219
Query: 245 TAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 304
T +DIWS G ++ E++ G+P + +S V + + ++ P P+
Sbjct: 220 TEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM------------KRLRDSPP-------PK 260
Query: 305 IKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLP 360
+K HKV P D + R P R TA E HPF + P +P
Sbjct: 261 LKNS--HKV-----SPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGLPECLVP 309
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K ETG A+K + + K K ++++ I+Q ++ P +V L+
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R + H R Y QI Y+H
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGR-FXEPHAR-------FYAAQIVLTFEYLH- 158
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NL++ + + +C Y APE+I + Y
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 217
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 93/196 (47%), Gaps = 31/196 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKR--YKN---RELQIMQMLDHPNIVALKHCF 144
+G G+ GVVF+ + +G ++A K + + + +N RELQ++ + P IV F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+S + +++++ + RI +++ + + + + L Y+
Sbjct: 74 YSDGE----ISICMEHMDGGSLDQVLKKAGRIPEQI----LGKVSIAVIKGLTYLREKHK 125
Query: 205 ICHRDIKPQNLLV--KGEPNV---------------SYICSRYYRAPELIFGATEYTTAI 247
I HRD+KP N+LV +GE + S++ +R Y +PE + G T Y+
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQG-THYSVQS 184
Query: 248 DIWSTGCVMAELLLGQ 263
DIWS G + E+ +G+
Sbjct: 185 DIWSMGLSLVEMAVGR 200
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 110/265 (41%), Gaps = 44/265 (16%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ ++ I+A+K + + + K RE++I L HPNI+ + +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F D+ + + H R + ++ AL Y H
Sbjct: 83 YFH---DRKRIYLMLEFAPRGELYKELQK-----HGRFDEQRSATFMEELADALHYCHER 134
Query: 203 IGICHRDIKPQNLLV--KGEPNVS--------------YICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ KGE ++ +C Y PE+I G T +
Sbjct: 135 -KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKT-HDE 192
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV-------LGTPTREEIKCMNPNYT 298
+D+W G + E L+G P F S + I+ V L +++ I + +
Sbjct: 193 KVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHP 252
Query: 299 EFKFP--QIKPHPWHKVFQKR-LPP 320
+ P + HPW K +R LPP
Sbjct: 253 PQRLPLKGVMEHPWVKANSRRVLPP 277
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 93/196 (47%), Gaps = 31/196 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKR--YKN---RELQIMQMLDHPNIVALKHCF 144
+G G+ GVVF+ + +G ++A K + + + +N RELQ++ + P IV F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+S + +++++ + RI +++ + + + + L Y+
Sbjct: 74 YSDGE----ISICMEHMDGGSLDQVLKKAGRIPEQI----LGKVSIAVIKGLTYLREKHK 125
Query: 205 ICHRDIKPQNLLV--KGEPNV---------------SYICSRYYRAPELIFGATEYTTAI 247
I HRD+KP N+LV +GE + S++ +R Y +PE + G T Y+
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQG-THYSVQS 184
Query: 248 DIWSTGCVMAELLLGQ 263
DIWS G + E+ +G+
Sbjct: 185 DIWSMGLSLVEMAVGR 200
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 110/265 (41%), Gaps = 44/265 (16%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ ++ I+A+K + + + K RE++I L HPNI+ + +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F D+ + + H R + ++ AL Y H
Sbjct: 82 YFH---DRKRIYLMLEFAPRGELYKELQK-----HGRFDEQRSATFMEELADALHYCHER 133
Query: 203 IGICHRDIKPQNLLV--KGEPNVS--------------YICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ KGE ++ +C Y PE+I G T +
Sbjct: 134 -KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKT-HDE 191
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV-------LGTPTREEIKCMNPNYT 298
+D+W G + E L+G P F S + I+ V L +++ I + +
Sbjct: 192 KVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHP 251
Query: 299 EFKFP--QIKPHPWHKVFQKR-LPP 320
+ P + HPW K +R LPP
Sbjct: 252 PQRLPLKGVMEHPWVKANSRRVLPP 276
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 110/265 (41%), Gaps = 44/265 (16%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQMLDHPNIVALKH 142
+G G FG V+ A+ ++ I+A+K + + + K RE++I L HPNI+ + +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F D+ + + H R + ++ AL Y H
Sbjct: 82 YFH---DRKRIYLMLEFAPRGELYKELQK-----HGRFDEQRSATFMEELADALHYCHER 133
Query: 203 IGICHRDIKPQNLLV--KGEPNVS--------------YICSRY-YRAPELIFGATEYTT 245
+ HRDIKP+NLL+ KGE ++ +C Y PE+I G T +
Sbjct: 134 -KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKT-HDE 191
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV-------LGTPTREEIKCMNPNYT 298
+D+W G + E L+G P F S + I+ V L +++ I + +
Sbjct: 192 KVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHP 251
Query: 299 EFKFP--QIKPHPWHKVFQKR-LPP 320
+ P + HPW K +R LPP
Sbjct: 252 PQRLPLKGVMEHPWVKANSRRVLPP 276
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 88/208 (42%), Gaps = 37/208 (17%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--------RELQIMQMLDHPNIVAL 140
+G G+F V A+ TG+ VA++ + DK N RE++IM++L+HPNIV L
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRII--DKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
F + V +Y H RM + QI A+ Y H
Sbjct: 79 ----FEVIETEKTLYLVMEYASGGEV----FDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 201 NCIGICHRDIKPQNLLVKGEPNV------------------SYICSRYYRAPELIFGATE 242
I HRD+K +NLL+ + N+ ++ S Y APEL G
Sbjct: 131 QKF-IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKY 189
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGES 270
+D+WS G ++ L+ G F G++
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 52/225 (23%)
Query: 178 QRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLL--------------------V 217
Q PL +V+ YQ+C AL ++H + H D+KP+N+L V
Sbjct: 150 QPYPLPHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSV 208
Query: 218 KG---------------EPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLG 262
K E + + + +R+YR PE+I + D+WS GC++ E G
Sbjct: 209 KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRG 267
Query: 263 QPLFPGESGVDQLVEIIKVLG-------TPTREEIK------CMNPNYTEFKFPQIKPHP 309
LF + LV + K+LG TR++ + N ++ ++ + P
Sbjct: 268 FTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKP 327
Query: 310 WHK-VFQKRLPP-EAVDLVCRFFQYSPNLRCTALEACVHPFFDEL 352
+ Q L + DL+ R ++ P R T EA +HPFF L
Sbjct: 328 LKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 372
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 93/196 (47%), Gaps = 31/196 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKR--YKN---RELQIMQMLDHPNIVALKHCF 144
+G G+ GVVF+ + +G ++A K + + + +N RELQ++ + P IV F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+S + +++++ + RI +++ + + + + L Y+
Sbjct: 74 YSDGE----ISICMEHMDGGSLDQVLKKAGRIPEQI----LGKVSIAVIKGLTYLREKHK 125
Query: 205 ICHRDIKPQNLLV--KGEPNV---------------SYICSRYYRAPELIFGATEYTTAI 247
I HRD+KP N+LV +GE + S++ +R Y +PE + G T Y+
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQG-THYSVQS 184
Query: 248 DIWSTGCVMAELLLGQ 263
DIWS G + E+ +G+
Sbjct: 185 DIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 93/196 (47%), Gaps = 31/196 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKR--YKN---RELQIMQMLDHPNIVALKHCF 144
+G G+ GVVF+ + +G ++A K + + + +N RELQ++ + P IV F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+S + +++++ + RI +++ + + + + L Y+
Sbjct: 74 YSDGE----ISICMEHMDGGSLDQVLKKAGRIPEQI----LGKVSIAVIKGLTYLREKHK 125
Query: 205 ICHRDIKPQNLLV--KGEPNV---------------SYICSRYYRAPELIFGATEYTTAI 247
I HRD+KP N+LV +GE + S++ +R Y +PE + G T Y+
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQG-THYSVQS 184
Query: 248 DIWSTGCVMAELLLGQ 263
DIWS G + E+ +G+
Sbjct: 185 DIWSMGLSLVEMAVGR 200
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 52/225 (23%)
Query: 178 QRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLL--------------------V 217
Q PL +V+ YQ+C AL ++H + H D+KP+N+L V
Sbjct: 127 QPYPLPHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSV 185
Query: 218 KG---------------EPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLG 262
K E + + + +R+YR PE+I + D+WS GC++ E G
Sbjct: 186 KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRG 244
Query: 263 QPLFPGESGVDQLVEIIKVLG-------TPTREEIK------CMNPNYTEFKFPQIKPHP 309
LF + LV + K+LG TR++ + N ++ ++ + P
Sbjct: 245 FTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKP 304
Query: 310 WHK-VFQKRLPP-EAVDLVCRFFQYSPNLRCTALEACVHPFFDEL 352
+ Q L + DL+ R ++ P R T EA +HPFF L
Sbjct: 305 LKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 349
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 88/208 (42%), Gaps = 37/208 (17%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--------RELQIMQMLDHPNIVAL 140
+G G+F V A+ TG+ VA+K + DK N RE++IM++L+HPNIV L
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
F + V +Y H RM + QI A+ Y H
Sbjct: 79 ----FEVIETEKTLYLVMEYASGGEV----FDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 201 NCIGICHRDIKPQNLLVKGEPNV------------------SYICSRYYRAPELIFGATE 242
I HRD+K +NLL+ + N+ ++ + Y APEL G
Sbjct: 131 QKF-IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKY 189
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGES 270
+D+WS G ++ L+ G F G++
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 122/294 (41%), Gaps = 63/294 (21%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRET-------GEIVAIKKVLQDKRYKNRELQIMQMLDHPN 136
Y+ +G G FG+V +C ET + V +K D+ +E+ I+ + H N
Sbjct: 7 YMIAEDLGRGEFGIVH--RCVETSSKKTYMAKFVKVKGT--DQVLVKKEISILNIARHRN 62
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
I+ L F S + RI + +++R + YV +Q+C AL
Sbjct: 63 ILHLHESFESMEE---LVMIFEFISGLDIFERINTSAFELNEREIVSYV----HQVCEAL 115
Query: 197 AYIHNCIGICHRDIKPQNLLVKGEPNVSYICSRYYRAPEL--------IFGATEY----- 243
++H+ I H DI+P+N++ + + + + +A +L +F A EY
Sbjct: 116 QFLHSH-NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEV 174
Query: 244 ------TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 297
+TA D+WS G ++ LL G F E+ Q++E I MN Y
Sbjct: 175 HQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN-QQIIENI-------------MNAEY 220
Query: 298 TEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDE 351
T F + + F K + EA+D V R R TA EA HP+ +
Sbjct: 221 T---FDE-------EAF-KEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 111/290 (38%), Gaps = 65/290 (22%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQ-DKRYK---NRELQIMQMLDHPNIVALKHCF 144
V+G G++G+V+ + +AIK++ + D RY + E+ + + L H NIV +
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQ----Y 84
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLI----YVKLYTYQICRALAYIH 200
+ + +++ + R+ + PL + YT QI L Y+H
Sbjct: 85 LGSFSENGFIKIFMEQVPGGSLSALLRS-----KWGPLKDNEQTIGFYTKQILEGLKYLH 139
Query: 201 NCIGICHRDIKPQNLLVKGEPNV--------------------SYICSRYYRAPELI-FG 239
+ I HRDIK N+L+ V ++ + Y APE+I G
Sbjct: 140 DN-QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKG 198
Query: 240 ATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTE 299
Y A DIWS GC + E+ G+P F + P
Sbjct: 199 PRGYGKAADIWSLGCTIIEMATGKPPF-----------------------YELGEPQAAM 235
Query: 300 FKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFF 349
FK K HP + + EA + + F+ P+ R A + V F
Sbjct: 236 FKVGMFKVHP---EIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFL 282
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 52/225 (23%)
Query: 178 QRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLL--------------------V 217
Q PL +V+ YQ+C AL ++H + H D+KP+N+L V
Sbjct: 118 QPYPLPHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSV 176
Query: 218 KG---------------EPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLG 262
K E + + + +R+YR PE+I + D+WS GC++ E G
Sbjct: 177 KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRG 235
Query: 263 QPLFPGESGVDQLVEIIKVLG-------TPTREEIK------CMNPNYTEFKFPQIKPHP 309
LF + LV + K+LG TR++ + N ++ ++ + P
Sbjct: 236 FTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKP 295
Query: 310 WHK-VFQKRLPP-EAVDLVCRFFQYSPNLRCTALEACVHPFFDEL 352
+ Q L + DL+ R ++ P R T EA +HPFF L
Sbjct: 296 LKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 340
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 87/208 (41%), Gaps = 37/208 (17%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--------RELQIMQMLDHPNIVAL 140
+G G+F V A+ TG VAIK + DK N RE++IM++L+HPNIV L
Sbjct: 19 TIGKGNFAKVKLARHILTGREVAIKII--DKTQLNPTSLQKLFREVRIMKILNHPNIVKL 76
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
F + V +Y H RM + QI A+ Y H
Sbjct: 77 ----FEVIETEKTLYLIMEYASGGEVF----DYLVAHGRMKEKEARSKFRQIVSAVQYCH 128
Query: 201 NCIGICHRDIKPQNLLVKGEPNV------------------SYICSRYYRAPELIFGATE 242
I HRD+K +NLL+ + N+ ++ S Y APEL G
Sbjct: 129 QK-RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKY 187
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGES 270
+D+WS G ++ L+ G F G++
Sbjct: 188 DGPEVDVWSLGVILYTLVSGSLPFDGQN 215
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 111/290 (38%), Gaps = 65/290 (22%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQ-DKRYK---NRELQIMQMLDHPNIVALKHCF 144
V+G G++G+V+ + +AIK++ + D RY + E+ + + L H NIV +
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQ----Y 70
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLI----YVKLYTYQICRALAYIH 200
+ + +++ + R+ + PL + YT QI L Y+H
Sbjct: 71 LGSFSENGFIKIFMEQVPGGSLSALLRS-----KWGPLKDNEQTIGFYTKQILEGLKYLH 125
Query: 201 NCIGICHRDIKPQNLLVKGEPNV--------------------SYICSRYYRAPELI-FG 239
+ I HRDIK N+L+ V ++ + Y APE+I G
Sbjct: 126 DN-QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKG 184
Query: 240 ATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTE 299
Y A DIWS GC + E+ G+P F + P
Sbjct: 185 PRGYGKAADIWSLGCTIIEMATGKPPF-----------------------YELGEPQAAM 221
Query: 300 FKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFF 349
FK K HP + + EA + + F+ P+ R A + V F
Sbjct: 222 FKVGMFKVHP---EIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFL 268
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 87/208 (41%), Gaps = 37/208 (17%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--------RELQIMQMLDHPNIVAL 140
+G G+F V A+ TG+ VA++ + DK N RE++IM++L+HPNIV L
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRII--DKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
F + V +Y H RM + QI A+ Y H
Sbjct: 79 ----FEVIETEKTLYLVMEYASGGEV----FDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 201 NCIGICHRDIKPQNLLVKGEPNVS------------------YICSRYYRAPELIFGATE 242
I HRD+K +NLL+ + N+ + S Y APEL G
Sbjct: 131 QKF-IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKY 189
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGES 270
+D+WS G ++ L+ G F G++
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 111/286 (38%), Gaps = 56/286 (19%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKV----LQDKRYKNRELQIMQMLDHPNIVALKHCF 144
++G G FG V + + TG +A K + ++DK E+ +M LDH N++ L F
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF 155
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
S D +RI + + ++++K QIC + ++H
Sbjct: 156 ESKND---IVLVMEYVDGGELFDRIIDESYNLTELDTILFMK----QICEGIRHMHQMY- 207
Query: 205 ICHRDIKPQNLL-----VKGEPNVSYICSRYYRAPELI---FGATEY-----------TT 245
I H D+KP+N+L K + + +R Y+ E + FG E+ +
Sbjct: 208 ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSF 267
Query: 246 AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 305
D+WS G + LL G F G++ + L I+ EE
Sbjct: 268 PTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEE---------------- 311
Query: 306 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDE 351
FQ + EA + + + + R +A EA HP+ +
Sbjct: 312 --------FQD-ISEEAKEFISKLLIKEKSWRISASEALKHPWLSD 348
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 33/201 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
+GTGSFG V K ETG A+K + + K K ++++ I+Q ++ P + L+
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLE 108
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F ++ + RI R + H R Y QI Y+H
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGR-FXEPHAR-------FYAAQIVLTFEYLH- 159
Query: 202 CIGICHRDIKPQNLLVKGEPNVS---------------YICSR-YYRAPELIFGATEYTT 245
+ + +RD+KP+NL++ + + +C Y APE+I + Y
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNK 218
Query: 246 AIDIWSTGCVMAELLLGQPLF 266
A+D W+ G ++ E+ G P F
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF 239
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 87/207 (42%), Gaps = 37/207 (17%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--------RELQIMQMLDHPNIVALK 141
+G G+F V A+ TG VAIK + DK N RE++IM++L+HPNIV L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKII--DKTQLNPTSLQKLFREVRIMKILNHPNIVKL- 79
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + V +Y H RM + QI A+ Y H
Sbjct: 80 ---FEVIETEKTLYLIMEYASGGEVF----DYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 132
Query: 202 CIGICHRDIKPQNLLVKGEPNV------------------SYICSRYYRAPELIFGATEY 243
I HRD+K +NLL+ + N+ ++ + Y APEL G
Sbjct: 133 K-RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYD 191
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGES 270
+D+WS G ++ L+ G F G++
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 88/211 (41%), Gaps = 35/211 (16%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQMLDHPN 136
YI +G GSFG V A +T + VA+K + + K+ RE+ +++L HP+
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
I+ L + TD V + +RM + + QI A+
Sbjct: 71 IIKLYDVITTPTDIVMVIEYAGGELFDYIVEK---------KRMTEDEGRRFFQQIICAI 121
Query: 197 AYIHNCIGICHRDIKPQNLLVKGEPNV------------------SYICSRYYRAPELIF 238
Y H I HRD+KP+NLL+ NV + S Y APE+I
Sbjct: 122 EYCHRH-KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVIN 180
Query: 239 GATEYTTAIDIWSTGCVMAELLLGQPLFPGE 269
G +D+WS G V+ +L+G+ F E
Sbjct: 181 GKLYAGPEVDVWSCGIVLYVMLVGRLPFDDE 211
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 92/196 (46%), Gaps = 31/196 (15%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKR--YKN---RELQIMQMLDHPNIVALKHCF 144
+G G+ GVVF+ + +G ++A K + + + +N RELQ++ + P IV F
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+S + +++++ + RI +++ + + + + L Y+
Sbjct: 77 YSDGE----ISICMEHMDGGSLDQVLKKAGRIPEQI----LGKVSIAVIKGLTYLREKHK 128
Query: 205 ICHRDIKPQNLLV--KGEPNV---------------SYICSRYYRAPELIFGATEYTTAI 247
I HRD+KP N+LV +GE + ++ +R Y +PE + G T Y+
Sbjct: 129 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQG-THYSVQS 187
Query: 248 DIWSTGCVMAELLLGQ 263
DIWS G + E+ +G+
Sbjct: 188 DIWSMGLSLVEMAVGR 203
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 132/313 (42%), Gaps = 79/313 (25%)
Query: 85 IAEHVVGTGSFG-VVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQML----DHPNIVA 139
++E ++G GS G VVFQ + G VA+K++L D + + L +++L DHPN++
Sbjct: 18 VSEKILGYGSSGTVVFQGSFQ--GRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVI- 72
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTY-QICRALAY 198
++ TTD+ + ++N S + ++ Y + QI +A+
Sbjct: 73 -RYYCSETTDRFLYIALELCNLNLQDLVE-SKNVSDENLKLQKEYNPISLLRQIASGVAH 130
Query: 199 IHNCIGICHRDIKPQNLLVK-----------GEPNVSYICSRY----------------- 230
+H+ + I HRD+KPQN+LV G N+ + S +
Sbjct: 131 LHS-LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNL 189
Query: 231 --------YRAPELIFGATEYTT------AIDIWSTGCVMAELLLGQPLFPGESGVDQLV 276
+RAPEL+ + T +IDI+S GCV +L + P +
Sbjct: 190 NNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY-YILSKGKHPFGDKYSRES 248
Query: 277 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNL 336
II+ G + +E+KC++ + L EA DL+ + + P
Sbjct: 249 NIIR--GIFSLDEMKCLH--------------------DRSLIAEATDLISQMIDHDPLK 286
Query: 337 RCTALEACVHPFF 349
R TA++ HP F
Sbjct: 287 RPTAMKVLRHPLF 299
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 132/313 (42%), Gaps = 79/313 (25%)
Query: 85 IAEHVVGTGSFG-VVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQML----DHPNIVA 139
++E ++G GS G VVFQ + G VA+K++L D + + L +++L DHPN++
Sbjct: 18 VSEKILGYGSSGTVVFQGSFQ--GRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVI- 72
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTY-QICRALAY 198
++ TTD+ + ++N S + ++ Y + QI +A+
Sbjct: 73 -RYYCSETTDRFLYIALELCNLNLQDLVE-SKNVSDENLKLQKEYNPISLLRQIASGVAH 130
Query: 199 IHNCIGICHRDIKPQNLLVK-----------GEPNVSYICSRY----------------- 230
+H+ + I HRD+KPQN+LV G N+ + S +
Sbjct: 131 LHS-LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNL 189
Query: 231 --------YRAPELIFGATEYTT------AIDIWSTGCVMAELLLGQPLFPGESGVDQLV 276
+RAPEL+ + T +IDI+S GCV +L + P +
Sbjct: 190 NNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY-YILSKGKHPFGDKYSRES 248
Query: 277 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNL 336
II+ G + +E+KC++ + L EA DL+ + + P
Sbjct: 249 NIIR--GIFSLDEMKCLH--------------------DRSLIAEATDLISQMIDHDPLK 286
Query: 337 RCTALEACVHPFF 349
R TA++ HP F
Sbjct: 287 RPTAMKVLRHPLF 299
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 43/228 (18%)
Query: 89 VVGTGSFGVVFQAKCR---ETGEIVAIKKV------LQDKRYKNRELQIMQMLDHPNIVA 139
V+G GSFG VF + ++G + A+K + ++D+ E I+ ++HP +V
Sbjct: 35 VLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVK 94
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIY--VKLYTYQICRALA 197
L H F T K R ++R+ + + VK Y ++ L
Sbjct: 95 L-HYAFQTEGKLYLILDFL---------RGGDLFTRLSKEVMFTEEDVKFYLAELALGLD 144
Query: 198 YIHNCIGICHRDIKPQNLLVKGEPNV-------------------SYICSRYYRAPELIF 238
++H+ +GI +RD+KP+N+L+ E ++ S+ + Y APE++
Sbjct: 145 HLHS-LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVV- 202
Query: 239 GATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV-LGTP 285
++ + D WS G +M E+L G F G+ + + I+K LG P
Sbjct: 203 NRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMP 250
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 38/218 (17%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQML-DHPNIVAL 140
V+G GSFG V A+ +ETG++ A+K + +D ++ +++ I+ + +HP + L
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
C F T D+ + +R + R Y +I AL ++H
Sbjct: 90 -FCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARAR-------FYAAEIISALMFLH 141
Query: 201 NCIGICHRDIKPQNLLV-------------------KGEPNVSYICSRYYRAPELIFGAT 241
+ GI +RD+K N+L+ G ++ + Y APE I
Sbjct: 142 D-KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPE-ILQEM 199
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEII 279
Y A+D W+ G ++ E+L G F E+ D L E I
Sbjct: 200 LYGPAVDWWAMGVLLYEMLCGHAPFEAENE-DDLFEAI 236
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 122/344 (35%), Gaps = 80/344 (23%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---------RELQIMQMLDHPNIVA 139
V+G G+F VV + RETG+ A+K V K + RE I ML HP+IV
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
L + ++D + R + + Y QI AL Y
Sbjct: 91 LLETY--SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAV--ASHYMRQILEALRYC 146
Query: 200 HNCIGICHRDIKPQNLLVKGEPNVS----------------------YICSRYYRAPELI 237
H+ I HRD+KP+N+L+ + N + + + ++ APE++
Sbjct: 147 HDN-NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 238 FGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 297
Y +D+W G ++ LL G + GT R + Y
Sbjct: 206 -KREPYGKPVDVWGCGVILFILLSG---------------CLPFYGTKERLFEGIIKGKY 249
Query: 298 TEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDE------ 351
++ P W + + A DLV R P R T EA HP+ E
Sbjct: 250 ------KMNPRQWSHISES-----AKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAY 298
Query: 352 ----------LRDPNTRLP-NGRPLPPLFNFKPPELSGIPPETI 384
LR N R G L + + K G PPE +
Sbjct: 299 KIHLPETVEQLRKFNARRKLKGAVLAAVSSHKFNSFYGDPPEEL 342
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 37/207 (17%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--------RELQIMQMLDHPNIVALK 141
+G G+F V A+ TG+ VA+K + DK N RE++IM++L+HPNIV L
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNHPNIVKL- 71
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
F + V +Y H M + QI A+ Y H
Sbjct: 72 ---FEVIETEKTLYLVMEYASGGEV----FDYLVAHGWMKEKEARAKFRQIVSAVQYCHQ 124
Query: 202 CIGICHRDIKPQNLLVKGEPNV------------------SYICSRYYRAPELIFGATEY 243
I HRD+K +NLL+ + N+ ++ S Y APEL G
Sbjct: 125 KF-IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 183
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGES 270
+D+WS G ++ L+ G F G++
Sbjct: 184 GPEVDVWSLGVILYTLVSGSLPFDGQN 210
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 47/221 (21%)
Query: 87 EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKN--RELQIMQMLDHPNIV 138
E ++G G FG V++A G+ VA+K D + +N +E ++ ML HPNI+
Sbjct: 12 EEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
AL+ K +NR+ +R+P + + QI R + Y
Sbjct: 70 ALRGVCL----KEPNLCLVMEFARGGPLNRVLSG-----KRIPPDILVNWAVQIARGMNY 120
Query: 199 IHN--CIGICHRDIKPQNLLV-----KGE--------------------PNVSYICSRYY 231
+H+ + I HRD+K N+L+ G+ +S + +
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAW 180
Query: 232 RAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGV 272
APE+I A+ ++ D+WS G ++ ELL G+ F G G+
Sbjct: 181 MAPEVI-RASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL 220
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 21/207 (10%)
Query: 83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKH 142
+I ++G GSFG VF A+ ++T + AIK + +D + +++ + +A +H
Sbjct: 18 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 77
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F + + + + L Y +I L ++H+
Sbjct: 78 PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK 137
Query: 203 IGICHRDIKPQNLLVK------------------GEPNVSYICSR-YYRAPELIFGATEY 243
GI +RD+K N+L+ G+ + C Y APE++ G +Y
Sbjct: 138 -GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLG-QKY 195
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGES 270
++D WS G ++ E+L+GQ F G+
Sbjct: 196 NHSVDWWSFGVLLYEMLIGQSPFHGQD 222
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 88/221 (39%), Gaps = 33/221 (14%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV------LQDKRYKNRELQIMQMLDHPNI 137
Y+ +G GSFG K E G IK++ +++ RE+ ++ + HPNI
Sbjct: 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNI 85
Query: 138 VALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
V + F + RI + Q ++ + QIC AL
Sbjct: 86 VQYRESF---EENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILD---WFVQICLALK 139
Query: 198 YIHNCIGICHRDIKPQNLLVKGEPNVSY-------------------ICSRYYRAPELIF 238
++H+ I HRDIK QN+ + + V I + YY +PE I
Sbjct: 140 HVHDR-KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPE-IC 197
Query: 239 GATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEII 279
Y DIW+ GCV+ EL + F S + +++II
Sbjct: 198 ENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKII 238
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 122/284 (42%), Gaps = 58/284 (20%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQ--DKRYKNRELQ----IMQMLDHPNIVALKHC 143
+G G++G V + + +G+I+A+K++ D++ + + L +M+ D P IV
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARN-YSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F D + ++ + YS + +P + T +AL ++
Sbjct: 90 LFREGD-----CWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN 144
Query: 203 IGICHRDIKPQNLLVKGEPNVSYICS-------------------RYYRAPELIFGATE- 242
+ I HRDIKP N+L+ N+ +C R Y APE I +
Sbjct: 145 LKIIHRDIKPSNILLDRSGNIK-LCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASR 203
Query: 243 --YTTAIDIWSTGCVMAELLLGQPLFPGESGV-DQLVEIIKVLGTP---TREEIKCMNPN 296
Y D+WS G + EL G+ +P + V DQL +++K G P + E + +P+
Sbjct: 204 QGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK--GDPPQLSNSEEREFSPS 261
Query: 297 YTEF-------------KFPQIKPHPWHKVFQKRLPPEAVDLVC 327
+ F K+ ++ HP+ ++++R AV++ C
Sbjct: 262 FINFVNLCLTKDESKRPKYKELLKHPFILMYEER----AVEVAC 301
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 116/319 (36%), Gaps = 77/319 (24%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPN 136
Y+ +G G F ++ +T E+ A K V + K + E+ I + LD+P+
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYS--RIHQRMPLIY---VKLYTYQ 191
+V H FF D V I R S +H+R + + + Q
Sbjct: 104 VVGF-HGFFEDDD------------FVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQ 150
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVK-------------------GEPNVSYICSRYYR 232
+ + Y+HN + HRD+K NL + GE + + Y
Sbjct: 151 TIQGVQYLHNN-RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYI 209
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE + ++ +DIWS GC++ LL+G+P F E C
Sbjct: 210 APE-VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------ETSC 246
Query: 293 MNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL 352
+ Y K + + + P A L+ R P LR + E FF
Sbjct: 247 LKETYIRIKKNEYS-------VPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSG 299
Query: 353 RDPNTRLPNG-RPLPPLFN 370
P RLP +PP F+
Sbjct: 300 YAP-MRLPTSCLTVPPRFS 317
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 48/226 (21%)
Query: 89 VVGTGSFGVVFQAK---CRETGEIVAIK--------KVLQDKRYKNRELQIMQMLDHPNI 137
V+G G +G VFQ + TG+I A+K + +D + E I++ + HP I
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 138 VALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVK----LYTYQIC 193
V L + F + + R I+++ Y +I
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREG------------IFMEDTACFYLAEIS 131
Query: 194 RALAYIHNCIGICHRDIKPQNLLVKGEPNV-------------------SYICSRYYRAP 234
AL ++H GI +RD+KP+N+++ + +V ++ + Y AP
Sbjct: 132 MALGHLHQK-GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAP 190
Query: 235 ELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIK 280
E++ + + A+D WS G +M ++L G P F GE+ + +I+K
Sbjct: 191 EILM-RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK 235
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 113/287 (39%), Gaps = 58/287 (20%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV-----LQDKRYKNRELQI-MQMLDHPNIVALKHC 143
+G G++GVV + + +G+I+A+K++ Q+++ +L I M+ +D P V
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
F D ++++ + Q +P + I +AL ++H+ +
Sbjct: 119 LFREGD-----VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 173
Query: 204 GICHRDIKPQNLLVKGEPNV---SYICSRY---------------YRAPELI---FGATE 242
+ HRD+KP N+L+ V + S Y Y APE I
Sbjct: 174 SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKG 233
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 302
Y+ DIWS G M EL + + FP +S GTP ++
Sbjct: 234 YSVKSDIWSLGITMIELAILR--FPYDS-----------WGTPFQQ-------------L 267
Query: 303 PQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFF 349
Q+ P ++ + E VD + + + R T E HPFF
Sbjct: 268 KQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 314
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 104/250 (41%), Gaps = 45/250 (18%)
Query: 65 HVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR 124
+ T G+ +S + V+G GS+ V + ++T I A+K V ++ +
Sbjct: 3 EAMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDE 62
Query: 125 ELQIMQM--------LDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRI 176
++ +Q +HP +V L CF + + + R
Sbjct: 63 DIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR-------- 114
Query: 177 HQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGEPNV------------- 223
+++P + + Y+ +I AL Y+H GI +RD+K N+L+ E ++
Sbjct: 115 QRKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 173
Query: 224 -----SYICSR-YYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLF--------PGE 269
S C Y APE++ G +Y ++D W+ G +M E++ G+ F P +
Sbjct: 174 PGDTTSXFCGTPNYIAPEILRGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 232
Query: 270 SGVDQLVEII 279
+ D L ++I
Sbjct: 233 NTEDYLFQVI 242
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 45/226 (19%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQM--------LDHPNIVAL 140
V+G GS+ V + ++T I A+K V ++ + ++ +Q +HP +V L
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 75
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
CF + + + R +++P + + Y+ +I AL Y+H
Sbjct: 76 HSCFQTESRLFFVIEYVNGGDLMFHMQR--------QRKLPEEHARFYSAEISLALNYLH 127
Query: 201 NCIGICHRDIKPQNLLVKGEPNV------------------SYICSR-YYRAPELIFGAT 241
GI +RD+K N+L+ E ++ S C Y APE++ G
Sbjct: 128 ER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE- 185
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLF--------PGESGVDQLVEII 279
+Y ++D W+ G +M E++ G+ F P ++ D L ++I
Sbjct: 186 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 231
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 117/296 (39%), Gaps = 66/296 (22%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALK 141
++G GSF V++A+ TG VAIK + + YK E++I L HP+I+ L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+ F + +NR +N + + + +QI + Y+H+
Sbjct: 78 NYF----EDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENE---ARHFMHQIITGMLYLHS 130
Query: 202 CIGICHRDIKPQNLLVKGEPNVSY------------------ICSR-YYRAPELIFGATE 242
GI HRD+ NLL+ N+ +C Y +PE I +
Sbjct: 131 H-GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPE-IATRSA 188
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 302
+ D+WS GC+ LL+G+P F ++ + L +++ +++
Sbjct: 189 HGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV-----------------LADYEM 231
Query: 303 PQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR 358
P L EA DL+ + + +P R + HPF R+ +T+
Sbjct: 232 PSF------------LSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMS--RNSSTK 273
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 96/226 (42%), Gaps = 48/226 (21%)
Query: 89 VVGTGSFGVVFQAK---CRETGEIVAIK--------KVLQDKRYKNRELQIMQMLDHPNI 137
V+G G +G VFQ + TG+I A+K + +D + E I++ + HP I
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 138 VALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVK----LYTYQIC 193
V L + F + + R I+++ Y +I
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREG------------IFMEDTACFYLAEIS 131
Query: 194 RALAYIHNCIGICHRDIKPQNLLVKGEPNVSY----ICSRY---------------YRAP 234
AL ++H GI +RD+KP+N+++ + +V +C Y AP
Sbjct: 132 MALGHLHQK-GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAP 190
Query: 235 ELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIK 280
E++ + + A+D WS G +M ++L G P F GE+ + +I+K
Sbjct: 191 EILM-RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK 235
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 37/224 (16%)
Query: 73 GRNGNSKQKVS-YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------- 123
G + + K+ Y+ +G G+FG V + + TG VA+K +L ++ ++
Sbjct: 1 GSKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVK-ILNRQKIRSLDVVGKIK 59
Query: 124 RELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLI 183
RE+Q +++ HP+I+ L + TD +Y H R+ +
Sbjct: 60 REIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELF--------DYICKHGRVEEM 111
Query: 184 YVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGEPNV------------------SY 225
+ QI A+ Y H + + HRD+KP+N+L+ N +
Sbjct: 112 EARRLFQQILSAVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS 170
Query: 226 ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGE 269
S Y APE+I G +DIWS G ++ LL G F E
Sbjct: 171 CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE 214
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 45/226 (19%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQM--------LDHPNIVAL 140
V+G GS+ V + ++T I A+K V ++ + ++ +Q +HP +V L
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 71
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
CF + + + R +++P + + Y+ +I AL Y+H
Sbjct: 72 HSCFQTESRLFFVIEYVNGGDLMFHMQR--------QRKLPEEHARFYSAEISLALNYLH 123
Query: 201 NCIGICHRDIKPQNLLVKGEPNV------------------SYICSR-YYRAPELIFGAT 241
GI +RD+K N+L+ E ++ S C Y APE++ G
Sbjct: 124 ER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE- 181
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLF--------PGESGVDQLVEII 279
+Y ++D W+ G +M E++ G+ F P ++ D L ++I
Sbjct: 182 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 227
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 113/287 (39%), Gaps = 58/287 (20%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV-----LQDKRYKNRELQI-MQMLDHPNIVALKHC 143
+G G++GVV + + +G+I+A+K++ Q+++ +L I M+ +D P V
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
F D ++++ + Q +P + I +AL ++H+ +
Sbjct: 75 LFREGD-----VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 129
Query: 204 GICHRDIKPQNLLVKGEPNV---SYICSRY---------------YRAPELI---FGATE 242
+ HRD+KP N+L+ V + S Y Y APE I
Sbjct: 130 SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKG 189
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 302
Y+ DIWS G M EL + + FP +S GTP ++
Sbjct: 190 YSVKSDIWSLGITMIELAILR--FPYDS-----------WGTPFQQ-------------L 223
Query: 303 PQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFF 349
Q+ P ++ + E VD + + + R T E HPFF
Sbjct: 224 KQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 270
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 92/224 (41%), Gaps = 37/224 (16%)
Query: 73 GRNGNSKQKVS-YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------- 123
G + + K+ Y+ +G G+FG V + + TG VA+K +L ++ ++
Sbjct: 1 GSKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVK-ILNRQKIRSLDVVGKIK 59
Query: 124 RELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLI 183
RE+Q +++ HP+I+ L + TD +Y H R+ +
Sbjct: 60 REIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELF--------DYICKHGRVEEM 111
Query: 184 YVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGEPNVSYI----------------- 226
+ QI A+ Y H + + HRD+KP+N+L+ N
Sbjct: 112 EARRLFQQILSAVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS 170
Query: 227 -CSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGE 269
S Y APE+I G +DIWS G ++ LL G F E
Sbjct: 171 CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE 214
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 40/219 (18%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
V+G GSFG V A + T E+ AIK + +D ++ +++ ++ +LD P +
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ--RMPLIYVKLYTYQICRALAYI 199
H F T D+ VN Y I Q + Y +I L ++
Sbjct: 86 HSCFQTVDRLYFVMEY--------VNGGDLMY-HIQQVGKFKEPQAVFYAAEISIGLFFL 136
Query: 200 HNCIGICHRDIKPQNLLVKGEPNVSY----ICSRY---------------YRAPELIFGA 240
H GI +RD+K N+++ E ++ +C + Y APE+I
Sbjct: 137 HKR-GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEII-AY 194
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEII 279
Y ++D W+ G ++ E+L GQP F GE D+L + I
Sbjct: 195 QPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE-DELFQSI 232
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 120/319 (37%), Gaps = 77/319 (24%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPN 136
Y+ +G G F ++ +T E+ A K V + K + E+ I + LD+P+
Sbjct: 28 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 87
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYS--RIHQRMPLIY---VKLYTYQ 191
+V H FF D V I R S +H+R + + + Q
Sbjct: 88 VVGF-HGFFEDDD------------FVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQ 134
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVKGEPNVSY------------------ICSR-YYR 232
+ + Y+HN + HRD+K NL + + +V +C Y
Sbjct: 135 TIQGVQYLHNN-RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYI 193
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE + ++ +DIWS GC++ LL+G+P F E C
Sbjct: 194 APE-VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------ETSC 230
Query: 293 MNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL 352
+ Y +IK + + + + P A L+ R P LR + E FF
Sbjct: 231 LKETYI-----RIKKNEYS--VPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSG 283
Query: 353 RDPNTRLPNG-RPLPPLFN 370
P RLP +PP F+
Sbjct: 284 YAP-MRLPTSCLTVPPRFS 301
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 117/319 (36%), Gaps = 77/319 (24%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPN 136
Y+ +G G F ++ +T E+ A K V + K + E+ I + LD+P+
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYS--RIHQRMPLIY---VKLYTYQ 191
+V H FF D V I R S +H+R + + + Q
Sbjct: 104 VVGF-HGFFEDDD------------FVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQ 150
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVKGEPNVSY------------------ICSR-YYR 232
+ + Y+HN + HRD+K NL + + +V +C Y
Sbjct: 151 TIQGVQYLHNN-RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYI 209
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE + ++ +DIWS GC++ LL+G+P F E C
Sbjct: 210 APE-VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------ETSC 246
Query: 293 MNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL 352
+ Y K + + + P A L+ R P LR + E FF
Sbjct: 247 LKETYIRIKKNEYS-------VPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSG 299
Query: 353 RDPNTRLPNG-RPLPPLFN 370
P RLP +PP F+
Sbjct: 300 YAP-MRLPTSCLTVPPRFS 317
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 43/204 (21%)
Query: 90 VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
+G G+FG V CR TGE+VA+KK+ R RE++I++ L H NIV
Sbjct: 21 LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
K +S + R+Y + H +R+ I + YT QIC+ + Y
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQAHAERIDHIKLLQYTSQICKGMEY 132
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSR-------------------YYRAPEL 236
+ I HRD+ +N+LV+ E V + ++ ++ APE
Sbjct: 133 LGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
+ ++++ A D+WS G V+ EL
Sbjct: 192 L-TESKFSVASDVWSFGVVLYELF 214
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 117/319 (36%), Gaps = 77/319 (24%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPN 136
Y+ +G G F ++ +T E+ A K V + K + E+ I + LD+P+
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYS--RIHQRMPLIY---VKLYTYQ 191
+V H FF D V I R S +H+R + + + Q
Sbjct: 104 VVGF-HGFFEDDD------------FVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQ 150
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVKGEPNVS------------------YICSR-YYR 232
+ + Y+HN + HRD+K NL + + +V +C Y
Sbjct: 151 TIQGVQYLHNN-RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYI 209
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 292
APE + ++ +DIWS GC++ LL+G+P F E C
Sbjct: 210 APE-VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------ETSC 246
Query: 293 MNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL 352
+ Y K + + + P A L+ R P LR + E FF
Sbjct: 247 LKETYIRIKKNEYS-------VPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSG 299
Query: 353 RDPNTRLPNG-RPLPPLFN 370
P RLP +PP F+
Sbjct: 300 YAP-MRLPTSCLTVPPRFS 317
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 105/253 (41%), Gaps = 45/253 (17%)
Query: 62 ETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRY 121
E + T G+ +S + V+G GS+ V + ++T I A++ V ++
Sbjct: 32 EEKEAMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVN 91
Query: 122 KNRELQIMQM--------LDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNY 173
+ ++ +Q +HP +V L CF + + + R
Sbjct: 92 DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR----- 146
Query: 174 SRIHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGEPNV---------- 223
+++P + + Y+ +I AL Y+H GI +RD+K N+L+ E ++
Sbjct: 147 ---QRKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 202
Query: 224 --------SYICSR-YYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLF-------- 266
S C Y APE++ G +Y ++D W+ G +M E++ G+ F
Sbjct: 203 GLRPGDTTSTFCGTPNYIAPEILRGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 261
Query: 267 PGESGVDQLVEII 279
P ++ D L ++I
Sbjct: 262 PDQNTEDYLFQVI 274
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 43/204 (21%)
Query: 90 VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
+G G+FG V CR TGE+VA+KK+ R RE++I++ L H NIV
Sbjct: 23 LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
K +S + R+Y + H +R+ I + YT QIC+ + Y
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQKHKERIDHIKLLQYTSQICKGMEY 134
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSR-------------------YYRAPEL 236
+ I HRD+ +N+LV+ E V + ++ ++ APE
Sbjct: 135 LGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 193
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
+ ++++ A D+WS G V+ EL
Sbjct: 194 L-TESKFSVASDVWSFGVVLYELF 216
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 43/204 (21%)
Query: 90 VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
+G G+FG V CR TGE+VA+KK+ R RE++I++ L H NIV
Sbjct: 24 LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
K +S + R+Y + H +R+ I + YT QIC+ + Y
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQKHKERIDHIKLLQYTSQICKGMEY 135
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSR-------------------YYRAPEL 236
+ I HRD+ +N+LV+ E V + ++ ++ APE
Sbjct: 136 LGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 194
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
+ ++++ A D+WS G V+ EL
Sbjct: 195 L-TESKFSVASDVWSFGVVLYELF 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 43/204 (21%)
Query: 90 VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
+G G+FG V CR TGE+VA+KK+ R RE++I++ L H NIV
Sbjct: 21 LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
K +S + R+Y + H +R+ I + YT QIC+ + Y
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQKHKERIDHIKLLQYTSQICKGMEY 132
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSR-------------------YYRAPEL 236
+ I HRD+ +N+LV+ E V + ++ ++ APE
Sbjct: 133 LGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
+ ++++ A D+WS G V+ EL
Sbjct: 192 L-TESKFSVASDVWSFGVVLYELF 214
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 43/204 (21%)
Query: 90 VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
+G G+FG V CR TGE+VA+KK+ R RE++I++ L H NIV
Sbjct: 18 LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
K +S + R+Y + H +R+ I + YT QIC+ + Y
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSR-------------------YYRAPEL 236
+ I HRD+ +N+LV+ E V + ++ ++ APE
Sbjct: 130 LGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES 188
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
+ ++++ A D+WS G V+ EL
Sbjct: 189 L-TESKFSVASDVWSFGVVLYELF 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 43/204 (21%)
Query: 90 VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
+G G+FG V CR TGE+VA+KK+ R RE++I++ L H NIV
Sbjct: 22 LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
K +S + R+Y + H +R+ I + YT QIC+ + Y
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQKHKERIDHIKLLQYTSQICKGMEY 133
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSR-------------------YYRAPEL 236
+ I HRD+ +N+LV+ E V + ++ ++ APE
Sbjct: 134 LGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 192
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
+ ++++ A D+WS G V+ EL
Sbjct: 193 L-TESKFSVASDVWSFGVVLYELF 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 43/204 (21%)
Query: 90 VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
+G G+FG V CR TGE+VA+KK+ R RE++I++ L H NIV
Sbjct: 25 LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
K +S + R+Y + H +R+ I + YT QIC+ + Y
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQKHKERIDHIKLLQYTSQICKGMEY 136
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSR-------------------YYRAPEL 236
+ I HRD+ +N+LV+ E V + ++ ++ APE
Sbjct: 137 LGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 195
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
+ ++++ A D+WS G V+ EL
Sbjct: 196 L-TESKFSVASDVWSFGVVLYELF 218
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 91/213 (42%), Gaps = 46/213 (21%)
Query: 85 IAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL----QDKRYKNRELQIMQMLDHPNIVAL 140
I V+G G FG + RETGE++ +K+++ + +R +E+++M+ L+HPN++
Sbjct: 13 IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLK- 71
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
F K T+ I ++ + + P + I +AY+H
Sbjct: 72 ---FIGVLYKDKRLNFITEYIKGGTLRGIIKS---MDSQYPWSQRVSFAKDIASGMAYLH 125
Query: 201 NCIGICHRDIKPQNLLVKGEPNV---------------------------------SYIC 227
+ + I HRD+ N LV+ NV + +
Sbjct: 126 S-MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVG 184
Query: 228 SRYYRAPELIFGATEYTTAIDIWSTGCVMAELL 260
+ Y+ APE+I G + Y +D++S G V+ E++
Sbjct: 185 NPYWMAPEMINGRS-YDEKVDVFSFGIVLCEII 216
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 43/204 (21%)
Query: 90 VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
+G G+FG V CR TGE+VA+KK+ R RE++I++ L H NIV
Sbjct: 49 LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
K +S + R+Y + H +R+ I + YT QIC+ + Y
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQKHKERIDHIKLLQYTSQICKGMEY 160
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSR-------------------YYRAPEL 236
+ I HRD+ +N+LV+ E V + ++ ++ APE
Sbjct: 161 LGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 219
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
+ ++++ A D+WS G V+ EL
Sbjct: 220 L-TESKFSVASDVWSFGVVLYELF 242
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 41/207 (19%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRY--KNRELQIM-------QMLDHPNIVA 139
V+G GSFG V A+ + E+ KVLQ K K E IM + + HP +V
Sbjct: 45 VIGKGSFGKVLLAR-HKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLI-YVKLYTYQICRALAY 198
L H F T DK +N Y +R L + Y +I AL Y
Sbjct: 104 L-HFSFQTADKLYFVLDY--------INGGELFYHLQRERCFLEPRARFYAAEIASALGY 154
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV-------------------SYICSRYYRAPELIFG 239
+H+ + I +RD+KP+N+L+ + ++ ++ + Y APE +
Sbjct: 155 LHS-LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPE-VLH 212
Query: 240 ATEYTTAIDIWSTGCVMAELLLGQPLF 266
Y +D W G V+ E+L G P F
Sbjct: 213 KQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 43/204 (21%)
Query: 90 VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
+G G+FG V CR TGE+VA+KK+ R RE++I++ L H NIV
Sbjct: 18 LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
K +S + R+Y + H +R+ I + YT QIC+ + Y
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSR-------------------YYRAPEL 236
+ I HRD+ +N+LV+ E V + ++ ++ APE
Sbjct: 130 LGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
+ ++++ A D+WS G V+ EL
Sbjct: 189 L-TESKFSVASDVWSFGVVLYELF 211
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 43/204 (21%)
Query: 90 VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
+G G+FG V CR TGE+VA+KK+ R RE++I++ L H NIV
Sbjct: 17 LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
K +S + R+Y + H +R+ I + YT QIC+ + Y
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQKHKERIDHIKLLQYTSQICKGMEY 128
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSR-------------------YYRAPEL 236
+ I HRD+ +N+LV+ E V + ++ ++ APE
Sbjct: 129 LGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 187
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
+ ++++ A D+WS G V+ EL
Sbjct: 188 L-TESKFSVASDVWSFGVVLYELF 210
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 43/204 (21%)
Query: 90 VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
+G G+FG V CR TGE+VA+KK+ R RE++I++ L H NIV
Sbjct: 36 LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
K +S + R+Y + H +R+ I + YT QIC+ + Y
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQKHKERIDHIKLLQYTSQICKGMEY 147
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSR-------------------YYRAPEL 236
+ I HRD+ +N+LV+ E V + ++ ++ APE
Sbjct: 148 LGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
+ ++++ A D+WS G V+ EL
Sbjct: 207 L-TESKFSVASDVWSFGVVLYELF 229
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 43/204 (21%)
Query: 90 VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
+G G+FG V CR TGE+VA+KK+ R RE++I++ L H NIV
Sbjct: 16 LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
K +S + R+Y + H +R+ I + YT QIC+ + Y
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQKHKERIDHIKLLQYTSQICKGMEY 127
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSR-------------------YYRAPEL 236
+ I HRD+ +N+LV+ E V + ++ ++ APE
Sbjct: 128 LGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 186
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
+ ++++ A D+WS G V+ EL
Sbjct: 187 L-TESKFSVASDVWSFGVVLYELF 209
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 87/221 (39%), Gaps = 49/221 (22%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL----QDKRYKNRELQIMQMLDHPNIVA 139
Y+ +G G F V + G A+K++L QD+ RE + ++ +HPNI+
Sbjct: 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILR 90
Query: 140 L-KHCFFSTTDKXXXXXXXXXXXXXXTVNRIAR-----NYSRIHQRMPLIYVKLYTYQIC 193
L +C K N I R N+ Q + L+ IC
Sbjct: 91 LVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLL------GIC 144
Query: 194 RALAYIHNCIGICHRDIKPQNLLV--KGEPNVSYI------------------------- 226
R L IH G HRD+KP N+L+ +G+P + +
Sbjct: 145 RGLEAIH-AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQ 203
Query: 227 -CSRYYRAPELIFGATEYTTA---IDIWSTGCVMAELLLGQ 263
C+ YRAPEL F + D+WS GCV+ ++ G+
Sbjct: 204 RCTISYRAPEL-FSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 43/204 (21%)
Query: 90 VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
+G G+FG V CR TGE+VA+KK+ R RE++I++ L H NIV
Sbjct: 18 LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
K +S + R+Y + H +R+ I + YT QIC+ + Y
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSR-------------------YYRAPEL 236
+ I HRD+ +N+LV+ E V + ++ ++ APE
Sbjct: 130 LGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
+ ++++ A D+WS G V+ EL
Sbjct: 189 L-TESKFSVASDVWSFGVVLYELF 211
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 43/204 (21%)
Query: 90 VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
+G G+FG V CR TGE+VA+KK+ R RE++I++ L H NIV
Sbjct: 36 LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
K +S + R+Y + H +R+ I + YT QIC+ + Y
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQKHKERIDHIKLLQYTSQICKGMEY 147
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSR-------------------YYRAPEL 236
+ I HRD+ +N+LV+ E V + ++ ++ APE
Sbjct: 148 LGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
+ ++++ A D+WS G V+ EL
Sbjct: 207 L-TESKFSVASDVWSFGVVLYELF 229
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 41/200 (20%)
Query: 87 EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--RELQIMQMLDHPNIVALKHCF 144
E VVG G+FGVV +AK R + VAIK++ + K EL+ + ++HPNIV L
Sbjct: 14 EEVVGRGAFGVVCKAKWR--AKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKL-----YTYQICRALAYI 199
+ Y+ +H PL Y + Q + +AY+
Sbjct: 72 LNPV------------CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 119
Query: 200 HNC--IGICHRDIKPQNLLVKGEPNVSYIC-----------------SRYYRAPELIFGA 240
H+ + HRD+KP NLL+ V IC S + APE +F
Sbjct: 120 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPE-VFEG 178
Query: 241 TEYTTAIDIWSTGCVMAELL 260
+ Y+ D++S G ++ E++
Sbjct: 179 SNYSEKCDVFSWGIILWEVI 198
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 41/200 (20%)
Query: 87 EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--RELQIMQMLDHPNIVALKHCF 144
E VVG G+FGVV +AK R + VAIK++ + K EL+ + ++HPNIV L
Sbjct: 13 EEVVGRGAFGVVCKAKWR--AKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKL-----YTYQICRALAYI 199
+ Y+ +H PL Y + Q + +AY+
Sbjct: 71 LNPV------------CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 118
Query: 200 HNC--IGICHRDIKPQNLLVKGEPNVSYIC-----------------SRYYRAPELIFGA 240
H+ + HRD+KP NLL+ V IC S + APE +F
Sbjct: 119 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPE-VFEG 177
Query: 241 TEYTTAIDIWSTGCVMAELL 260
+ Y+ D++S G ++ E++
Sbjct: 178 SNYSEKCDVFSWGIILWEVI 197
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 87/208 (41%), Gaps = 37/208 (17%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--------RELQIMQMLDHPNIVAL 140
+G G+F V A+ TG+ VA+K + DK N RE++I ++L+HPNIV L
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIXKVLNHPNIVKL 78
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
F + V +Y H R + QI A+ Y H
Sbjct: 79 ----FEVIETEKTLYLVXEYASGGEV----FDYLVAHGRXKEKEARAKFRQIVSAVQYCH 130
Query: 201 NCIGICHRDIKPQNLLVKGEPNV------------------SYICSRYYRAPELIFGATE 242
I HRD+K +NLL+ + N+ ++ + Y APEL G
Sbjct: 131 QKF-IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKY 189
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGES 270
+D+WS G ++ L+ G F G++
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 36/205 (17%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--------RELQIMQMLDHP 135
YI +G G+FG V K TG VA+K +L ++ ++ RE+Q +++ HP
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVK-ILNRQKIRSLDVVGKIRREIQNLKLFRHP 76
Query: 136 NIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRA 195
+I+ L + +D + + R + +R+ QI
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRL--------FQQILSG 128
Query: 196 LAYIHNCIGICHRDIKPQNLLVKGEPNVSYI------------------CSRYYRAPELI 237
+ Y H + + HRD+KP+N+L+ N S Y APE+I
Sbjct: 129 VDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVI 187
Query: 238 FGATEYTTAIDIWSTGCVMAELLLG 262
G +DIWS+G ++ LL G
Sbjct: 188 SGRLYAGPEVDIWSSGVILYALLCG 212
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 37/203 (18%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR-----ELQIMQMLDHPNIVALKHCF 144
+G G+FG V++A+ +ET ++A KV+ K + E+ I+ DHPNIV L F
Sbjct: 45 LGDGAFGKVYKAQNKETS-VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ + + + R + +++ Q AL Y+H+
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQ-------IQVVCKQTLDALNYLHDN-K 155
Query: 205 ICHRDIKPQNLLVKGEPNV-------------------SYICSRYYRAPELIFGATE--- 242
I HRD+K N+L + ++ S+I + Y+ APE++ T
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 243 -YTTAIDIWSTGCVMAELLLGQP 264
Y D+WS G + E+ +P
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEP 238
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 43/204 (21%)
Query: 90 VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
+G G+FG V CR TGE+VA+KK+ R RE++I++ L H NIV
Sbjct: 21 LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
K +S + R Y + H +R+ I + YT QIC+ + Y
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGS------LREYLQKHKERIDHIKLLQYTSQICKGMEY 132
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSR-------------------YYRAPEL 236
+ I HRD+ +N+LV+ E V + ++ ++ APE
Sbjct: 133 LGTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
+ ++++ A D+WS G V+ EL
Sbjct: 192 L-TESKFSVASDVWSFGVVLYELF 214
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 37/203 (18%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR-----ELQIMQMLDHPNIVALKHCF 144
+G G+FG V++A+ +ET ++A KV+ K + E+ I+ DHPNIV L F
Sbjct: 45 LGDGAFGKVYKAQNKETS-VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ + + + R + +++ Q AL Y+H+
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQ-------IQVVCKQTLDALNYLHDN-K 155
Query: 205 ICHRDIKPQNLLVKGEPNV-------------------SYICSRYYRAPELIFGATE--- 242
I HRD+K N+L + ++ S+I + Y+ APE++ T
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 243 -YTTAIDIWSTGCVMAELLLGQP 264
Y D+WS G + E+ +P
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEP 238
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 85/201 (42%), Gaps = 21/201 (10%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTT 148
++G GSFG VF A+ ++T + AIK + +D + +++ + +A +H F +
Sbjct: 25 MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM 84
Query: 149 DKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGICHR 208
+ + + L Y +I L ++H+ GI +R
Sbjct: 85 FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK-GIVYR 143
Query: 209 DIKPQNLLVK------------------GEPNVSYICSR-YYRAPELIFGATEYTTAIDI 249
D+K N+L+ G+ + C Y APE++ G +Y ++D
Sbjct: 144 DLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLG-QKYNHSVDW 202
Query: 250 WSTGCVMAELLLGQPLFPGES 270
WS G ++ E+L+GQ F G+
Sbjct: 203 WSFGVLLYEMLIGQSPFHGQD 223
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 98/252 (38%), Gaps = 56/252 (22%)
Query: 88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-----NRELQIMQMLDHPNIVALKH 142
+G G++G V A R T E VA+K V + +E+ I +ML+H N+V
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKF-- 70
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ + +RI + MP + + +Q+ + Y+H
Sbjct: 71 -YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG- 123
Query: 203 IGICHRDIKPQNLLVKGEPNVSY------ICSRY---------------YRAPELIFGAT 241
IGI HRDIKP+NLL+ N+ RY Y APEL+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 183
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 301
+ +D+WS G V+ +L G+ P + D E Y+++K
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWK 222
Query: 302 FPQIKPHPWHKV 313
+ +PW K+
Sbjct: 223 EKKTYLNPWKKI 234
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 112/287 (39%), Gaps = 63/287 (21%)
Query: 90 VGTGSFGVVFQ-----AKCRETGEIVAIKKV-LQDKRYKNRELQIMQMLDHPNIVALKHC 143
+G G+F VV + A +I+ KK+ +D + RE +I ++L HPNIV L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
+ +AR Y I QI A+ + H +
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDI--VAREYYSEADASHCI------QQILEAVLHCHQ-M 140
Query: 204 GICHRDIKPQNLL--------------------VKGEPNV--SYICSRYYRAPELIFGAT 241
G+ HRD+KP+NLL V+GE + + Y +PE +
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPE-VLRKD 199
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 301
Y +D+W+ G ++ LL+G P F E +L + IK +
Sbjct: 200 PYGKPVDLWACGVILYILLVGYPPFWDEDQ-HRLYQQIKA----------------GAYD 242
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
FP + W V PEA DL+ + +P+ R TA EA HP+
Sbjct: 243 FPSPE---WDTV-----TPEAKDLINKMLTINPSKRITAAEALKHPW 281
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 98/252 (38%), Gaps = 56/252 (22%)
Query: 88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-----NRELQIMQMLDHPNIVALKH 142
+G G++G V A R T E VA+K V + +E+ I +ML+H N+V
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKF-- 69
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ + +RI + MP + + +Q+ + Y+H
Sbjct: 70 -YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG- 122
Query: 203 IGICHRDIKPQNLLVKGEPNVSY------ICSRY---------------YRAPELIFGAT 241
IGI HRDIKP+NLL+ N+ RY Y APEL+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 301
+ +D+WS G V+ +L G+ P + D E Y+++K
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWK 221
Query: 302 FPQIKPHPWHKV 313
+ +PW K+
Sbjct: 222 EKKTYLNPWKKI 233
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 98/252 (38%), Gaps = 56/252 (22%)
Query: 88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-----NRELQIMQMLDHPNIVALKH 142
+G G++G V A R T E VA+K V + +E+ I +ML+H N+V
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKF-- 69
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ + +RI + MP + + +Q+ + Y+H
Sbjct: 70 -YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG- 122
Query: 203 IGICHRDIKPQNLLVKGEPNVSY------ICSRY---------------YRAPELIFGAT 241
IGI HRDIKP+NLL+ N+ RY Y APEL+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 301
+ +D+WS G V+ +L G+ P + D E Y+++K
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWK 221
Query: 302 FPQIKPHPWHKV 313
+ +PW K+
Sbjct: 222 EKKTYLNPWKKI 233
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 113/293 (38%), Gaps = 58/293 (19%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQI-MQMLDHPNIVALKH 142
Y+ + +G GS+ + + T A+K + + KR + E++I ++ HPNI+ LK
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKD 88
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ D +++I R + + + I + + Y+H+
Sbjct: 89 VY---DDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVL-----HTIGKTVEYLHSQ 140
Query: 203 IGICHRDIKPQNLLV---KGEPNVSYIC--------------------SRYYRAPELIFG 239
G+ HRD+KP N+L G P IC + + APE +
Sbjct: 141 -GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPE-VLK 198
Query: 240 ATEYTTAIDIWSTGCVMAELLLG-QPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 298
Y DIWS G ++ +L G P G S D EI+ +G+
Sbjct: 199 RQGYDEGCDIWSLGILLYTMLAGYTPFANGPS--DTPEEILTRIGSG------------- 243
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDE 351
KF + W+ V + A DLV + P+ R TA + HP+ +
Sbjct: 244 --KF-TLSGGNWNTVSET-----AKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 37/203 (18%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR-----ELQIMQMLDHPNIVALKHCF 144
+G G+FG V++AK +ETG + A KV++ K + E++I+ DHP IV L +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAA-AKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ + + R + +++ Q+ AL ++H+
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ-------IQVVCRQMLEALNFLHSK-R 129
Query: 205 ICHRDIKPQNLLVKGEPNV-------------------SYICSRYYRAPELI----FGAT 241
I HRD+K N+L+ E ++ S+I + Y+ APE++ T
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 189
Query: 242 EYTTAIDIWSTGCVMAELLLGQP 264
Y DIWS G + E+ +P
Sbjct: 190 PYDYKADIWSLGITLIEMAQIEP 212
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 37/203 (18%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR-----ELQIMQMLDHPNIVALKHCF 144
+G G+FG V++AK +ETG + A KV++ K + E++I+ DHP IV L +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAA-AKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ + + R + +++ Q+ AL ++H+
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ-------IQVVCRQMLEALNFLHSK-R 137
Query: 205 ICHRDIKPQNLLVKGEPNV-------------------SYICSRYYRAPELI----FGAT 241
I HRD+K N+L+ E ++ S+I + Y+ APE++ T
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 197
Query: 242 EYTTAIDIWSTGCVMAELLLGQP 264
Y DIWS G + E+ +P
Sbjct: 198 PYDYKADIWSLGITLIEMAQIEP 220
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 43/204 (21%)
Query: 90 VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
+G G+FG V CR TGE+VA+KK+ R RE++I++ L H NIV
Sbjct: 19 LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
K +S + R+Y + H +R+ I + YT QIC+ + Y
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQKHKERIDHIKLLQYTSQICKGMEY 130
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNVSY----------ICSRYYR------------APEL 236
+ I HR++ +N+LV+ E V YY+ APE
Sbjct: 131 LGTKRYI-HRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES 189
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
+ ++++ A D+WS G V+ EL
Sbjct: 190 L-TESKFSVASDVWSFGVVLYELF 212
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 115/319 (36%), Gaps = 77/319 (24%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G F F+ +T E+ A K V + K + E+ I + L H ++V H
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF-H 83
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYS--RIHQRMPLIY---VKLYTYQICRALA 197
FF D V + R S +H+R + + Y QI
Sbjct: 84 GFFEDND------------FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 131
Query: 198 YIHNCIGICHRDIKPQNLLVK-------------------GEPNVSYICSRYYRAPELIF 238
Y+H + HRD+K NL + GE + + Y APE +
Sbjct: 132 YLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE-VL 189
Query: 239 GATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 298
++ +D+WS GC+M LL+G+P F E C+ Y
Sbjct: 190 SKKGHSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL 227
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR 358
+IK + + K + P A L+ + Q P R T E FF P R
Sbjct: 228 -----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP-AR 279
Query: 359 LP-NGRPLPPLFNFKPPEL 376
LP +PP F+ P L
Sbjct: 280 LPITCLTIPPXFSIAPSSL 298
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 112/290 (38%), Gaps = 58/290 (20%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQI-MQMLDHPNIVALKH 142
Y+ + +G GS+ + + T A+K + + KR + E++I ++ HPNI+ LK
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKD 88
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ D +++I R + + + I + + Y+H+
Sbjct: 89 VY---DDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVL-----HTIGKTVEYLHSQ 140
Query: 203 IGICHRDIKPQNLLV---KGEPNVSYIC--------------------SRYYRAPELIFG 239
G+ HRD+KP N+L G P IC + + APE +
Sbjct: 141 -GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPE-VLK 198
Query: 240 ATEYTTAIDIWSTGCVMAELLLG-QPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 298
Y DIWS G ++ +L G P G S D EI+ +G+
Sbjct: 199 RQGYDEGCDIWSLGILLYTMLAGYTPFANGPS--DTPEEILTRIGSG------------- 243
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
KF + W+ V + A DLV + P+ R TA + HP+
Sbjct: 244 --KFT-LSGGNWNTVSET-----AKDLVSKMLHVDPHQRLTAKQVLQHPW 285
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 98/252 (38%), Gaps = 56/252 (22%)
Query: 88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-----NRELQIMQMLDHPNIVALKH 142
+G G++G V A R T E VA+K V + +E+ I +ML+H N+V
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF-- 69
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ + +RI + MP + + +Q+ + Y+H
Sbjct: 70 -YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG- 122
Query: 203 IGICHRDIKPQNLLVKGEPNVSY------ICSRY---------------YRAPELIFGAT 241
IGI HRDIKP+NLL+ N+ RY Y APEL+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 301
+ +D+WS G V+ +L G+ P + D E Y+++K
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSXQE-------------------YSDWK 221
Query: 302 FPQIKPHPWHKV 313
+ +PW K+
Sbjct: 222 EKKTYLNPWKKI 233
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 98/252 (38%), Gaps = 56/252 (22%)
Query: 88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-----NRELQIMQMLDHPNIVALKH 142
+G G++G V A R T E VA+K V + +E+ I +ML+H N+V
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF-- 70
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ + +RI + MP + + +Q+ + Y+H
Sbjct: 71 -YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG- 123
Query: 203 IGICHRDIKPQNLLVKGEPNVSY------ICSRY---------------YRAPELIFGAT 241
IGI HRDIKP+NLL+ N+ RY Y APEL+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 301
+ +D+WS G V+ +L G+ P + D E Y+++K
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWK 222
Query: 302 FPQIKPHPWHKV 313
+ +PW K+
Sbjct: 223 EKKTYLNPWKKI 234
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 98/252 (38%), Gaps = 56/252 (22%)
Query: 88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-----NRELQIMQMLDHPNIVALKH 142
+G G++G V A R T E VA+K V + +E+ I +ML+H N+V
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF-- 69
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ + +RI + MP + + +Q+ + Y+H
Sbjct: 70 -YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG- 122
Query: 203 IGICHRDIKPQNLLVKGEPNVSY------ICSRY---------------YRAPELIFGAT 241
IGI HRDIKP+NLL+ N+ RY Y APEL+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 301
+ +D+WS G V+ +L G+ P + D E Y+++K
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWK 221
Query: 302 FPQIKPHPWHKV 313
+ +PW K+
Sbjct: 222 EKKTYLNPWKKI 233
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 98/252 (38%), Gaps = 56/252 (22%)
Query: 88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-----NRELQIMQMLDHPNIVALKH 142
+G G++G V A R T E VA+K V + +E+ I +ML+H N+V
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF-- 68
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ + +RI + MP + + +Q+ + Y+H
Sbjct: 69 -YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG- 121
Query: 203 IGICHRDIKPQNLLVKGEPNVSY------ICSRY---------------YRAPELIFGAT 241
IGI HRDIKP+NLL+ N+ RY Y APEL+
Sbjct: 122 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 181
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 301
+ +D+WS G V+ +L G+ P + D E Y+++K
Sbjct: 182 FHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWK 220
Query: 302 FPQIKPHPWHKV 313
+ +PW K+
Sbjct: 221 EKKTYLNPWKKI 232
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 98/252 (38%), Gaps = 56/252 (22%)
Query: 88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-----NRELQIMQMLDHPNIVALKH 142
+G G++G V A R T E VA+K V + +E+ I +ML+H N+V
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF-- 69
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ + +RI + MP + + +Q+ + Y+H
Sbjct: 70 -YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG- 122
Query: 203 IGICHRDIKPQNLLVKGEPNVSY------ICSRY---------------YRAPELIFGAT 241
IGI HRDIKP+NLL+ N+ RY Y APEL+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 301
+ +D+WS G V+ +L G+ P + D E Y+++K
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWK 221
Query: 302 FPQIKPHPWHKV 313
+ +PW K+
Sbjct: 222 EKKTYLNPWKKI 233
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 98/252 (38%), Gaps = 56/252 (22%)
Query: 88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-----NRELQIMQMLDHPNIVALKH 142
+G G++G V A R T E VA+K V + +E+ I +ML+H N+V
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF-- 70
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ + +RI + MP + + +Q+ + Y+H
Sbjct: 71 -YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG- 123
Query: 203 IGICHRDIKPQNLLVKGEPNVSY------ICSRY---------------YRAPELIFGAT 241
IGI HRDIKP+NLL+ N+ RY Y APEL+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 301
+ +D+WS G V+ +L G+ P + D E Y+++K
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWK 222
Query: 302 FPQIKPHPWHKV 313
+ +PW K+
Sbjct: 223 EKKTYLNPWKKI 234
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 98/252 (38%), Gaps = 56/252 (22%)
Query: 88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-----NRELQIMQMLDHPNIVALKH 142
+G G++G V A R T E VA+K V + +E+ I +ML+H N+V
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF-- 70
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ + +RI + MP + + +Q+ + Y+H
Sbjct: 71 -YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG- 123
Query: 203 IGICHRDIKPQNLLVKGEPNVSY------ICSRY---------------YRAPELIFGAT 241
IGI HRDIKP+NLL+ N+ RY Y APEL+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 301
+ +D+WS G V+ +L G+ P + D E Y+++K
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWK 222
Query: 302 FPQIKPHPWHKV 313
+ +PW K+
Sbjct: 223 EKKTYLNPWKKI 234
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 98/252 (38%), Gaps = 56/252 (22%)
Query: 88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-----NRELQIMQMLDHPNIVALKH 142
+G G++G V A R T E VA+K V + +E+ I +ML+H N+V
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF-- 69
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ + +RI + MP + + +Q+ + Y+H
Sbjct: 70 -YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG- 122
Query: 203 IGICHRDIKPQNLLVKGEPNVSY------ICSRY---------------YRAPELIFGAT 241
IGI HRDIKP+NLL+ N+ RY Y APEL+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 301
+ +D+WS G V+ +L G+ P + D E Y+++K
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWK 221
Query: 302 FPQIKPHPWHKV 313
+ +PW K+
Sbjct: 222 EKKTYLNPWKKI 233
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 83/206 (40%), Gaps = 35/206 (16%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIK----KVLQDKRYKNR---ELQIMQMLDHPNIVALKH 142
+G GSFG V A TG+ VA+K KVL + R E+ +++L HP+I+ L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
S + V R +M + + QI A+ Y H
Sbjct: 72 VIKSKDEIIMVIEYAGNELFDYIVQR---------DKMSEQEARRFFQQIISAVEYCHRH 122
Query: 203 IGICHRDIKPQNLLVKGEPNV------------------SYICSRYYRAPELIFGATEYT 244
I HRD+KP+NLL+ NV + S Y APE+I G
Sbjct: 123 -KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 181
Query: 245 TAIDIWSTGCVMAELLLGQPLFPGES 270
+D+WS G ++ +L + F ES
Sbjct: 182 PEVDVWSCGVILYVMLCRRLPFDDES 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 98/252 (38%), Gaps = 56/252 (22%)
Query: 88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-----NRELQIMQMLDHPNIVALKH 142
+G G++G V A R T E VA+K V + +E+ I +ML+H N+V
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF-- 70
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ + +RI + MP + + +Q+ + Y+H
Sbjct: 71 -YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG- 123
Query: 203 IGICHRDIKPQNLLVKGEPNVSY------ICSRY---------------YRAPELIFGAT 241
IGI HRDIKP+NLL+ N+ RY Y APEL+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 301
+ +D+WS G V+ +L G+ P + D E Y+++K
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWK 222
Query: 302 FPQIKPHPWHKV 313
+ +PW K+
Sbjct: 223 EKKTYLNPWKKI 234
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 115/319 (36%), Gaps = 77/319 (24%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G F F+ +T E+ A K V + K + E+ I + L H ++V H
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF-H 83
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYS--RIHQRMPLIY---VKLYTYQICRALA 197
FF D V + R S +H+R + + Y QI
Sbjct: 84 GFFEDND------------FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 131
Query: 198 YIHNCIGICHRDIKPQNLLVK-------------------GEPNVSYICSRYYRAPELIF 238
Y+H + HRD+K NL + GE + + Y APE +
Sbjct: 132 YLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE-VL 189
Query: 239 GATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 298
++ +D+WS GC+M LL+G+P F E C+ Y
Sbjct: 190 SKKGHSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL 227
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR 358
+IK + + K + P A L+ + Q P R T E FF P R
Sbjct: 228 -----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP-AR 279
Query: 359 LP-NGRPLPPLFNFKPPEL 376
LP +PP F+ P L
Sbjct: 280 LPITCLTIPPRFSIAPSSL 298
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 98/252 (38%), Gaps = 56/252 (22%)
Query: 88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-----NRELQIMQMLDHPNIVALKH 142
+G G++G V A R T E VA+K V + +E+ I +ML+H N+V
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF-- 70
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ + +RI + MP + + +Q+ + Y+H
Sbjct: 71 -YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG- 123
Query: 203 IGICHRDIKPQNLLVKGEPNVSY------ICSRY---------------YRAPELIFGAT 241
IGI HRDIKP+NLL+ N+ RY Y APEL+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 301
+ +D+WS G V+ +L G+ P + D E Y+++K
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWK 222
Query: 302 FPQIKPHPWHKV 313
+ +PW K+
Sbjct: 223 EKKTYLNPWKKI 234
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 98/252 (38%), Gaps = 56/252 (22%)
Query: 88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-----NRELQIMQMLDHPNIVALKH 142
+G G++G V A R T E VA+K V + +E+ I +ML+H N+V
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF-- 69
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ + +RI + MP + + +Q+ + Y+H
Sbjct: 70 -YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG- 122
Query: 203 IGICHRDIKPQNLLVKGEPNVSY------ICSRY---------------YRAPELIFGAT 241
IGI HRDIKP+NLL+ N+ RY Y APEL+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 301
+ +D+WS G V+ +L G+ P + D E Y+++K
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWK 221
Query: 302 FPQIKPHPWHKV 313
+ +PW K+
Sbjct: 222 EKKTYLNPWKKI 233
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 98/252 (38%), Gaps = 56/252 (22%)
Query: 88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-----NRELQIMQMLDHPNIVALKH 142
+G G++G V A R T E VA+K V + +E+ I +ML+H N+V
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF-- 69
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ + +RI + MP + + +Q+ + Y+H
Sbjct: 70 -YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG- 122
Query: 203 IGICHRDIKPQNLLVKGEPNVSY------ICSRY---------------YRAPELIFGAT 241
IGI HRDIKP+NLL+ N+ RY Y APEL+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 301
+ +D+WS G V+ +L G+ P + D E Y+++K
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWK 221
Query: 302 FPQIKPHPWHKV 313
+ +PW K+
Sbjct: 222 EKKTYLNPWKKI 233
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 83/206 (40%), Gaps = 35/206 (16%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIK----KVLQDKRYKNR---ELQIMQMLDHPNIVALKH 142
+G GSFG V A TG+ VA+K KVL + R E+ +++L HP+I+ L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
S + V R +M + + QI A+ Y H
Sbjct: 76 VIKSKDEIIMVIEYAGNELFDYIVQR---------DKMSEQEARRFFQQIISAVEYCHRH 126
Query: 203 IGICHRDIKPQNLLVKGEPNV------------------SYICSRYYRAPELIFGATEYT 244
I HRD+KP+NLL+ NV + S Y APE+I G
Sbjct: 127 -KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 185
Query: 245 TAIDIWSTGCVMAELLLGQPLFPGES 270
+D+WS G ++ +L + F ES
Sbjct: 186 PEVDVWSCGVILYVMLCRRLPFDDES 211
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 98/252 (38%), Gaps = 56/252 (22%)
Query: 88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-----NRELQIMQMLDHPNIVALKH 142
+G G++G V A R T E VA+K V + +E+ I +ML+H N+V
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF-- 69
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ + +RI + MP + + +Q+ + Y+H
Sbjct: 70 -YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG- 122
Query: 203 IGICHRDIKPQNLLVKGEPNVSY------ICSRY---------------YRAPELIFGAT 241
IGI HRDIKP+NLL+ N+ RY Y APEL+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 301
+ +D+WS G V+ +L G+ P + D E Y+++K
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWK 221
Query: 302 FPQIKPHPWHKV 313
+ +PW K+
Sbjct: 222 EKKTYLNPWKKI 233
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 98/252 (38%), Gaps = 56/252 (22%)
Query: 88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-----NRELQIMQMLDHPNIVALKH 142
+G G++G V A R T E VA+K V + +E+ I +ML+H N+V
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF-- 70
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ + +RI + MP + + +Q+ + Y+H
Sbjct: 71 -YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG- 123
Query: 203 IGICHRDIKPQNLLVKGEPNVSY------ICSRY---------------YRAPELIFGAT 241
IGI HRDIKP+NLL+ N+ RY Y APEL+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 301
+ +D+WS G V+ +L G+ P + D E Y+++K
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWK 222
Query: 302 FPQIKPHPWHKV 313
+ +PW K+
Sbjct: 223 EKKTYLNPWKKI 234
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 80/196 (40%), Gaps = 32/196 (16%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK---NRELQIMQMLDHPNIVALKHCFFS 146
+G+G+FGV + +++ E+VA+K + + ++ RE+ + L HPNIV K +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 147 TTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGIC 206
T + R +S R + Q+ ++Y H + +C
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGR-FSEDEAR-------FFFQQLISGVSYCH-AMQVC 137
Query: 207 HRDIKPQNLLVKGEPN--------------------VSYICSRYYRAPELIFGATEYTTA 246
HRD+K +N L+ G P S + + Y APE++
Sbjct: 138 HRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKV 197
Query: 247 IDIWSTGCVMAELLLG 262
D+WS G + +L+G
Sbjct: 198 ADVWSCGVTLYVMLVG 213
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 98/252 (38%), Gaps = 56/252 (22%)
Query: 88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-----NRELQIMQMLDHPNIVALKH 142
+G G++G V A R T E VA+K V + +E+ I +ML+H N+V
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF-- 69
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ + +RI + MP + + +Q+ + Y+H
Sbjct: 70 -YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG- 122
Query: 203 IGICHRDIKPQNLLVKGEPNVSY------ICSRY---------------YRAPELIFGAT 241
IGI HRDIKP+NLL+ N+ RY Y APEL+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 301
+ +D+WS G V+ +L G+ P + D E Y+++K
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWK 221
Query: 302 FPQIKPHPWHKV 313
+ +PW K+
Sbjct: 222 EKKTYLNPWKKI 233
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 102/255 (40%), Gaps = 64/255 (25%)
Query: 124 RELQIMQMLD-HPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPL 182
+E+ I++ + HPNI+ LK + + T + + + + +++ L
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNT----------FFFLVFDLMKKGELFDYLTEKVTL 121
Query: 183 IYVKLYTYQICRALAYI---HNCIGICHRDIKPQNLLVKGEPNVSY-------------- 225
+ T +I RAL + + + I HRD+KP+N+L+ + N+
Sbjct: 122 --SEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK 179
Query: 226 ---ICSR-YYRAPELIFGATE-----YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV 276
+C Y APE+I + Y +D+WSTG +M LL G P F + L
Sbjct: 180 LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR 239
Query: 277 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNL 336
I M+ NY +F P+ + DLV RF P
Sbjct: 240 MI--------------MSGNY-QFGSPEWDDY----------SDTVKDLVSRFLVVQPQK 274
Query: 337 RCTALEACVHPFFDE 351
R TA EA HPFF +
Sbjct: 275 RYTAEEALAHPFFQQ 289
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 115/319 (36%), Gaps = 77/319 (24%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G F F+ +T E+ A K V + K + E+ I + L H ++V H
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF-H 87
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYS--RIHQRMPLIY---VKLYTYQICRALA 197
FF D V + R S +H+R + + Y QI
Sbjct: 88 GFFEDND------------FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 135
Query: 198 YIHNCIGICHRDIKPQNLLVK-------------------GEPNVSYICSRYYRAPELIF 238
Y+H + HRD+K NL + GE + + Y APE +
Sbjct: 136 YLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE-VL 193
Query: 239 GATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 298
++ +D+WS GC+M LL+G+P F E C+ Y
Sbjct: 194 SKKGHSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL 231
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR 358
+IK + + K + P A L+ + Q P R T E FF P R
Sbjct: 232 -----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP-AR 283
Query: 359 LP-NGRPLPPLFNFKPPEL 376
LP +PP F+ P L
Sbjct: 284 LPITCLTIPPRFSIAPSSL 302
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 98/252 (38%), Gaps = 56/252 (22%)
Query: 88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-----NRELQIMQMLDHPNIVALKH 142
+G G++G V A R T E VA+K V + +E+ I +ML+H N+V
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF-- 69
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ + +RI + MP + + +Q+ + Y+H
Sbjct: 70 -YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG- 122
Query: 203 IGICHRDIKPQNLLVKGEPNVSY------ICSRY---------------YRAPELIFGAT 241
IGI HRDIKP+NLL+ N+ RY Y APEL+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 301
+ +D+WS G V+ +L G+ P + D E Y+++K
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWK 221
Query: 302 FPQIKPHPWHKV 313
+ +PW K+
Sbjct: 222 EKKTYLNPWKKI 233
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 80/196 (40%), Gaps = 32/196 (16%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK---NRELQIMQMLDHPNIVALKHCFFS 146
+G+G+FGV + +++ E+VA+K + + ++ RE+ + L HPNIV K +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILT 86
Query: 147 TTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGIC 206
T + R +S R + Q+ ++Y H + +C
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGR-FSEDEAR-------FFFQQLISGVSYCH-AMQVC 137
Query: 207 HRDIKPQNLLVKGEPN--------------------VSYICSRYYRAPELIFGATEYTTA 246
HRD+K +N L+ G P S + + Y APE++
Sbjct: 138 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKV 197
Query: 247 IDIWSTGCVMAELLLG 262
D+WS G + +L+G
Sbjct: 198 ADVWSCGVTLYVMLVG 213
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 83/206 (40%), Gaps = 35/206 (16%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIK----KVLQDKRYKNR---ELQIMQMLDHPNIVALKH 142
+G GSFG V A TG+ VA+K KVL + R E+ +++L HP+I+ L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
S + V R +M + + QI A+ Y H
Sbjct: 82 VIKSKDEIIMVIEYAGNELFDYIVQR---------DKMSEQEARRFFQQIISAVEYCHRH 132
Query: 203 IGICHRDIKPQNLLVKGEPNV------------------SYICSRYYRAPELIFGATEYT 244
I HRD+KP+NLL+ NV + S Y APE+I G
Sbjct: 133 -KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 191
Query: 245 TAIDIWSTGCVMAELLLGQPLFPGES 270
+D+WS G ++ +L + F ES
Sbjct: 192 PEVDVWSCGVILYVMLCRRLPFDDES 217
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 106/285 (37%), Gaps = 59/285 (20%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK---NRELQIMQMLDHPNIVALKHCFFS 146
+G+G+FGV + + T E+VA+K + + RE+ + L HPNIV K +
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILT 87
Query: 147 TTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGIC 206
T + R +S R + Q+ ++Y H+ + IC
Sbjct: 88 PTHLAIIMEYASGGELYERICNAGR-FSEDEAR-------FFFQQLLSGVSYCHS-MQIC 138
Query: 207 HRDIKPQNLLVKGEPN--------------------VSYICSRYYRAPELIFGATEYTTA 246
HRD+K +N L+ G P S + + Y APE++ EY
Sbjct: 139 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL-RQEYDGK 197
Query: 247 I-DIWSTGCVMAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 304
I D+WS G + +L+G P E D I ++L ++ P
Sbjct: 198 IADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILS--------------VKYSIPD 243
Query: 305 IKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFF 349
R+ PE L+ R F P R + E H +F
Sbjct: 244 ----------DIRISPECCHLISRIFVADPATRISIPEIKTHSWF 278
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 102/255 (40%), Gaps = 64/255 (25%)
Query: 124 RELQIMQMLD-HPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPL 182
+E+ I++ + HPNI+ LK + + T + + + + +++ L
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNT----------FFFLVFDLMKKGELFDYLTEKVTL 121
Query: 183 IYVKLYTYQICRALAYI---HNCIGICHRDIKPQNLLVKGEPNVSY-------------- 225
+ T +I RAL + + + I HRD+KP+N+L+ + N+
Sbjct: 122 --SEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK 179
Query: 226 ---ICSR-YYRAPELIFGATE-----YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV 276
+C Y APE+I + Y +D+WSTG +M LL G P F + L
Sbjct: 180 LRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR 239
Query: 277 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNL 336
I M+ NY +F P+ + DLV RF P
Sbjct: 240 MI--------------MSGNY-QFGSPEWDDY----------SDTVKDLVSRFLVVQPQK 274
Query: 337 RCTALEACVHPFFDE 351
R TA EA HPFF +
Sbjct: 275 RYTAEEALAHPFFQQ 289
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 83/206 (40%), Gaps = 35/206 (16%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIK----KVLQDKRYKNR---ELQIMQMLDHPNIVALKH 142
+G GSFG V A TG+ VA+K KVL + R E+ +++L HP+I+ L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
S + V R +M + + QI A+ Y H
Sbjct: 81 VIKSKDEIIMVIEYAGNELFDYIVQR---------DKMSEQEARRFFQQIISAVEYCHRH 131
Query: 203 IGICHRDIKPQNLLVKGEPNV------------------SYICSRYYRAPELIFGATEYT 244
I HRD+KP+NLL+ NV + S Y APE+I G
Sbjct: 132 -KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 190
Query: 245 TAIDIWSTGCVMAELLLGQPLFPGES 270
+D+WS G ++ +L + F ES
Sbjct: 191 PEVDVWSCGVILYVMLCRRLPFDDES 216
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 102/255 (40%), Gaps = 64/255 (25%)
Query: 124 RELQIMQMLD-HPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPL 182
+E+ I++ + HPNI+ LK + + T + + + + +++ L
Sbjct: 59 KEVDILRKVSGHPNIIQLKDTYETNT----------FFFLVFDLMKKGELFDYLTEKVTL 108
Query: 183 IYVKLYTYQICRALAYI---HNCIGICHRDIKPQNLLVKGEPNVSY-------------- 225
+ T +I RAL + + + I HRD+KP+N+L+ + N+
Sbjct: 109 --SEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK 166
Query: 226 ---ICSR-YYRAPELIFGATE-----YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV 276
+C Y APE+I + Y +D+WSTG +M LL G P F + L
Sbjct: 167 LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR 226
Query: 277 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNL 336
I M+ NY +F P+ + DLV RF P
Sbjct: 227 MI--------------MSGNY-QFGSPEWDDY----------SDTVKDLVSRFLVVQPQK 261
Query: 337 RCTALEACVHPFFDE 351
R TA EA HPFF +
Sbjct: 262 RYTAEEALAHPFFQQ 276
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 37/203 (18%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR-----ELQIMQMLDHPNIVALKHCF 144
+G G+FG V++A+ +ET ++A KV+ K + E+ I+ DHPNIV L F
Sbjct: 45 LGDGAFGKVYKAQNKETS-VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ + + + R + +++ Q AL Y+H+
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQ-------IQVVCKQTLDALNYLHDN-K 155
Query: 205 ICHRDIKPQNLLVKGEPNVS-------------------YICSRYYRAPELIFGATE--- 242
I HRD+K N+L + ++ +I + Y+ APE++ T
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDR 215
Query: 243 -YTTAIDIWSTGCVMAELLLGQP 264
Y D+WS G + E+ +P
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEP 238
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 80/196 (40%), Gaps = 32/196 (16%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK---NRELQIMQMLDHPNIVALKHCFFS 146
+G+G+FGV + +++ E+VA+K + + ++ RE+ + L HPNIV K +
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 147 TTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGIC 206
T + R +S R + Q+ ++Y H + +C
Sbjct: 86 PTHLAIVMEYASGGELFERICNAGR-FSEDEAR-------FFFQQLISGVSYCH-AMQVC 136
Query: 207 HRDIKPQNLLVKGEPN--------------------VSYICSRYYRAPELIFGATEYTTA 246
HRD+K +N L+ G P S + + Y APE++
Sbjct: 137 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKV 196
Query: 247 IDIWSTGCVMAELLLG 262
D+WS G + +L+G
Sbjct: 197 ADVWSCGVTLYVMLVG 212
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 105/294 (35%), Gaps = 63/294 (21%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---------RELQIMQMLDHPNIVA 139
V+G G F VV + RETG+ A+K V K + RE I ML HP+IV
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
L + ++D + R + + Y QI AL Y
Sbjct: 93 LLETY--SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAV--ASHYMRQILEALRYC 148
Query: 200 HNCIGICHRDIKPQNLLVKGEPNVS----------------------YICSRYYRAPELI 237
H+ I HRD+KP +L+ + N + + + ++ APE++
Sbjct: 149 HDN-NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 207
Query: 238 FGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 297
Y +D+W G ++ LL G + GT R + Y
Sbjct: 208 -KREPYGKPVDVWGCGVILFILLSG---------------CLPFYGTKERLFEGIIKGKY 251
Query: 298 TEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDE 351
++ P W + + A DLV R P R T EA HP+ E
Sbjct: 252 ------KMNPRQWSHISES-----AKDLVRRMLMLDPAERITVYEALNHPWLKE 294
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 97/252 (38%), Gaps = 56/252 (22%)
Query: 88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-----NRELQIMQMLDHPNIVALKH 142
+G G++G V A R T E VA+K V + +E+ I ML+H N+V
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKF-- 70
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ + +RI + MP + + +Q+ + Y+H
Sbjct: 71 -YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG- 123
Query: 203 IGICHRDIKPQNLLVKGEPNVSY------ICSRY---------------YRAPELIFGAT 241
IGI HRDIKP+NLL+ N+ RY Y APEL+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 301
+ +D+WS G V+ +L G+ P + D E Y+++K
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWK 222
Query: 302 FPQIKPHPWHKV 313
+ +PW K+
Sbjct: 223 EKKTYLNPWKKI 234
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 110/260 (42%), Gaps = 60/260 (23%)
Query: 60 GAETGHVIRTTIGGRNGNSK-QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD 118
G +TG++ TIGG+ ++ + + E +G+G+ G V++ + R+TG ++A+K++
Sbjct: 7 GKQTGYL---TIGGQRYQAEINDLENLGE--MGSGTCGQVWKMRFRKTGHVIAVKQM--- 58
Query: 119 KRYKNRELQ---------IMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRI 169
+R N+E +++ D P IV F + TD + +
Sbjct: 59 RRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTD------------VFIAMELM 106
Query: 170 ARNYSRIHQRM----PLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGEPNV-- 223
++ +RM P + T I +AL Y+ G+ HRD+KP N+L+ +
Sbjct: 107 GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKL 166
Query: 224 -----------------SYICSRYYRAPELIF----GATEYTTAIDIWSTGCVMAELLLG 262
S C+ Y APE I +Y D+WS G + EL G
Sbjct: 167 CDFGISGRLVDDKAKDRSAGCAAYM-APERIDPPDPTKPDYDIRADVWSLGISLVELATG 225
Query: 263 QPLFPGESGVDQLVEIIKVL 282
Q FP ++ + KVL
Sbjct: 226 Q--FPYKNCKTDFEVLTKVL 243
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 80/196 (40%), Gaps = 32/196 (16%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK---NRELQIMQMLDHPNIVALKHCFFS 146
+G+G+FGV + +++ E+VA+K + + ++ RE+ + L HPNIV K +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 147 TTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGIC 206
T + R +S R + Q+ ++Y H + +C
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGR-FSEDEAR-------FFFQQLISGVSYCH-AMQVC 137
Query: 207 HRDIKPQNLLVKGEPNVSY-ICSRYYR-------------------APELIFGATEYTTA 246
HRD+K +N L+ G P IC+ Y APE++
Sbjct: 138 HRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKV 197
Query: 247 IDIWSTGCVMAELLLG 262
D+WS G + +L+G
Sbjct: 198 ADVWSCGVTLYVMLVG 213
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 114/319 (35%), Gaps = 77/319 (24%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G F F+ +T E+ A K V + K + E+ I + L H ++V H
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF-H 105
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYS--RIHQRMPLIY---VKLYTYQICRALA 197
FF D V + R S +H+R + + Y QI
Sbjct: 106 GFFEDND------------FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 153
Query: 198 YIHNCIGICHRDIKPQNLLVK-------------------GEPNVSYICSRYYRAPELIF 238
Y+H + HRD+K NL + GE + Y APE +
Sbjct: 154 YLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE-VL 211
Query: 239 GATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 298
++ +D+WS GC+M LL+G+P F E C+ Y
Sbjct: 212 SKKGHSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL 249
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR 358
+IK + + K + P A L+ + Q P R T E FF P R
Sbjct: 250 -----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP-AR 301
Query: 359 LP-NGRPLPPLFNFKPPEL 376
LP +PP F+ P L
Sbjct: 302 LPITCLTIPPRFSIAPSSL 320
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 119/344 (34%), Gaps = 80/344 (23%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---------RELQIMQMLDHPNIVA 139
V+G G F VV + RETG+ A+K V K + RE I ML HP+IV
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
L + ++D + R + + Y QI AL Y
Sbjct: 91 LLETY--SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAV--ASHYMRQILEALRYC 146
Query: 200 HNCIGICHRDIKPQNLLVKGEPNVS----------------------YICSRYYRAPELI 237
H+ I HRD+KP +L+ + N + + + ++ APE++
Sbjct: 147 HDN-NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 238 FGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 297
Y +D+W G ++ LL G + GT R + Y
Sbjct: 206 -KREPYGKPVDVWGCGVILFILLSG---------------CLPFYGTKERLFEGIIKGKY 249
Query: 298 TEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDE------ 351
++ P W + + A DLV R P R T EA HP+ E
Sbjct: 250 ------KMNPRQWSHISES-----AKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAY 298
Query: 352 ----------LRDPNTRLP-NGRPLPPLFNFKPPELSGIPPETI 384
LR N R G L + + K G PPE +
Sbjct: 299 KIHLPETVEQLRKFNARRKLKGAVLAAVSSHKFNSFYGDPPEEL 342
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 114/319 (35%), Gaps = 77/319 (24%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G F F+ +T E+ A K V + K + E+ I + L H ++V H
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF-H 107
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYS--RIHQRMPLIY---VKLYTYQICRALA 197
FF D V + R S +H+R + + Y QI
Sbjct: 108 GFFEDND------------FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 155
Query: 198 YIHNCIGICHRDIKPQNLLVK-------------------GEPNVSYICSRYYRAPELIF 238
Y+H + HRD+K NL + GE + Y APE +
Sbjct: 156 YLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE-VL 213
Query: 239 GATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 298
++ +D+WS GC+M LL+G+P F E C+ Y
Sbjct: 214 SKKGHSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL 251
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR 358
+IK + + K + P A L+ + Q P R T E FF P R
Sbjct: 252 -----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP-AR 303
Query: 359 LP-NGRPLPPLFNFKPPEL 376
LP +PP F+ P L
Sbjct: 304 LPITCLTIPPRFSIAPSSL 322
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 40/227 (17%)
Query: 83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ-------DKRYKNRELQIMQMLDHP 135
Y V+G G+FG V + + T ++ A+K + + D + E IM + P
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 136 NIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRA 195
+V L F++ D VN ++ NY +P + + YT ++ A
Sbjct: 135 WVVQL---FYAFQDDRYLYMVMEYMPGGDLVNLMS-NYD-----VPEKWARFYTAEVVLA 185
Query: 196 LAYIHNCIGICHRDIKPQNLLVKGEPNV--------------------SYICSRYYRAPE 235
L IH+ +G HRD+KP N+L+ ++ + + + Y +PE
Sbjct: 186 LDAIHS-MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPE 244
Query: 236 LI---FGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEII 279
++ G Y D WS G + E+L+G F +S V +I+
Sbjct: 245 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 125/318 (39%), Gaps = 77/318 (24%)
Query: 85 IAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ----------IMQMLD- 133
+ V+G G G V Q + T E A+K +LQD RE++ I++++D
Sbjct: 65 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 123
Query: 134 HPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQIC 193
+ N+ A + C + +SRI R + + +I
Sbjct: 124 YENLYAGRKCLLIVMECLDG----------------GELFSRIQDRGDQAFTEREASEIM 167
Query: 194 R----ALAYIHNCIGICHRDIKPQNLLVKGE-PN-------------------VSYIC-S 228
+ A+ Y+H+ I I HRD+KP+NLL + PN ++ C +
Sbjct: 168 KSIGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 226
Query: 229 RYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 288
YY APE + G +Y + D+WS G +M LL G P F G + G TR
Sbjct: 227 PYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRI 279
Query: 289 EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ +++FP + W +V + E L+ + P R T E HP+
Sbjct: 280 RM-------GQYEFPNPE---WSEVSE-----EVKMLIRNLLKTEPTQRMTITEFMNHPW 324
Query: 349 -FDELRDPNTRLPNGRPL 365
+ P T L R L
Sbjct: 325 IMQSTKVPQTPLHTSRVL 342
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 40/227 (17%)
Query: 83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ-------DKRYKNRELQIMQMLDHP 135
Y V+G G+FG V + + T ++ A+K + + D + E IM + P
Sbjct: 70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 129
Query: 136 NIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRA 195
+V L F++ D VN ++ NY +P + + YT ++ A
Sbjct: 130 WVVQL---FYAFQDDRYLYMVMEYMPGGDLVNLMS-NYD-----VPEKWARFYTAEVVLA 180
Query: 196 LAYIHNCIGICHRDIKPQNLLVKGEPNV--------------------SYICSRYYRAPE 235
L IH+ +G HRD+KP N+L+ ++ + + + Y +PE
Sbjct: 181 LDAIHS-MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPE 239
Query: 236 LI---FGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEII 279
++ G Y D WS G + E+L+G F +S V +I+
Sbjct: 240 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 286
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 112/289 (38%), Gaps = 63/289 (21%)
Query: 90 VGTGSFGVVFQAKCRETGE-----IVAIKKV-LQDKRYKNRELQIMQMLDHPNIVALKHC 143
+G G+F VV + G+ I+ KK+ +D + RE +I ++L HPNIV L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
+ +AR Y I QI A+ + H +
Sbjct: 79 ISEEGHHYLIFDLVTGGELFEDI--VAREYYSEADASHCI------QQILEAVLHCHQ-M 129
Query: 204 GICHRDIKPQNLL--------------------VKGEPNV--SYICSRYYRAPELIFGAT 241
G+ HR++KP+NLL V+GE + + Y +PE +
Sbjct: 130 GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPE-VLRKD 188
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 301
Y +D+W+ G ++ LL+G P F E +L + IK +
Sbjct: 189 PYGKPVDLWACGVILYILLVGYPPFWDEDQ-HRLYQQIKA----------------GAYD 231
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFD 350
FP + W V PEA DL+ + +P+ R TA EA HP+
Sbjct: 232 FPSPE---WDTV-----TPEAKDLINKMLTINPSKRITAAEALKHPWIS 272
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 125/318 (39%), Gaps = 77/318 (24%)
Query: 85 IAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ----------IMQMLD- 133
+ V+G G G V Q + T E A+K +LQD RE++ I++++D
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 79
Query: 134 HPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQIC 193
+ N+ A + C + +SRI R + + +I
Sbjct: 80 YENLYAGRKCLLIVMECLDG----------------GELFSRIQDRGDQAFTEREASEIM 123
Query: 194 R----ALAYIHNCIGICHRDIKPQNLLVKGE-PN-------------------VSYIC-S 228
+ A+ Y+H+ I I HRD+KP+NLL + PN ++ C +
Sbjct: 124 KSIGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 182
Query: 229 RYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 288
YY APE + G +Y + D+WS G +M LL G P F G + G TR
Sbjct: 183 PYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRI 235
Query: 289 EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ +++FP + W +V + E L+ + P R T E HP+
Sbjct: 236 RM-------GQYEFPNPE---WSEVSE-----EVKMLIRNLLKTEPTQRMTITEFMNHPW 280
Query: 349 -FDELRDPNTRLPNGRPL 365
+ P T L R L
Sbjct: 281 IMQSTKVPQTPLHTSRVL 298
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 97/252 (38%), Gaps = 56/252 (22%)
Query: 88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-----NRELQIMQMLDHPNIVALKH 142
+G G+ G V A R T E VA+K V + +E+ I +ML+H N+V
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF-- 69
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ + +RI + MP + + +Q+ + Y+H
Sbjct: 70 -YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG- 122
Query: 203 IGICHRDIKPQNLLVKGEPNVSY------ICSRY---------------YRAPELIFGAT 241
IGI HRDIKP+NLL+ N+ RY Y APEL+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 301
+ +D+WS G V+ +L G+ P + D E Y+++K
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWK 221
Query: 302 FPQIKPHPWHKV 313
+ +PW K+
Sbjct: 222 EKKTYLNPWKKI 233
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 125/318 (39%), Gaps = 77/318 (24%)
Query: 85 IAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ----------IMQMLD- 133
+ V+G G G V Q + T E A+K +LQD RE++ I++++D
Sbjct: 71 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 129
Query: 134 HPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQIC 193
+ N+ A + C + +SRI R + + +I
Sbjct: 130 YENLYAGRKCLLIVMECLDG----------------GELFSRIQDRGDQAFTEREASEIM 173
Query: 194 R----ALAYIHNCIGICHRDIKPQNLLVKGE-PN-------------------VSYIC-S 228
+ A+ Y+H+ I I HRD+KP+NLL + PN ++ C +
Sbjct: 174 KSIGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 232
Query: 229 RYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 288
YY APE + G +Y + D+WS G +M LL G P F G + G TR
Sbjct: 233 PYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRI 285
Query: 289 EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ +++FP + W +V + E L+ + P R T E HP+
Sbjct: 286 RM-------GQYEFPNPE---WSEVSE-----EVKMLIRNLLKTEPTQRMTITEFMNHPW 330
Query: 349 -FDELRDPNTRLPNGRPL 365
+ P T L R L
Sbjct: 331 IMQSTKVPQTPLHTSRVL 348
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 40/227 (17%)
Query: 83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ-------DKRYKNRELQIMQMLDHP 135
Y V+G G+FG V + + T ++ A+K + + D + E IM + P
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 136 NIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRA 195
+V L F++ D VN ++ NY +P + + YT ++ A
Sbjct: 135 WVVQL---FYAFQDDRYLYMVMEYMPGGDLVNLMS-NYD-----VPEKWARFYTAEVVLA 185
Query: 196 LAYIHNCIGICHRDIKPQNLLVKGEPNV--------------------SYICSRYYRAPE 235
L IH+ +G HRD+KP N+L+ ++ + + + Y +PE
Sbjct: 186 LDAIHS-MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPE 244
Query: 236 LI---FGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEII 279
++ G Y D WS G + E+L+G F +S V +I+
Sbjct: 245 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 125/318 (39%), Gaps = 77/318 (24%)
Query: 85 IAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ----------IMQMLD- 133
+ V+G G G V Q + T E A+K +LQD RE++ I++++D
Sbjct: 35 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 93
Query: 134 HPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQIC 193
+ N+ A + C + +SRI R + + +I
Sbjct: 94 YENLYAGRKCLLIVMECLDG----------------GELFSRIQDRGDQAFTEREASEIM 137
Query: 194 R----ALAYIHNCIGICHRDIKPQNLLVKGE-PN-------------------VSYIC-S 228
+ A+ Y+H+ I I HRD+KP+NLL + PN ++ C +
Sbjct: 138 KSIGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 196
Query: 229 RYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 288
YY APE + G +Y + D+WS G +M LL G P F G + G TR
Sbjct: 197 PYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRI 249
Query: 289 EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ +++FP + W +V + E L+ + P R T E HP+
Sbjct: 250 RM-------GQYEFPNPE---WSEVSE-----EVKMLIRNLLKTEPTQRMTITEFMNHPW 294
Query: 349 -FDELRDPNTRLPNGRPL 365
+ P T L R L
Sbjct: 295 IMQSTKVPQTPLHTSRVL 312
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 125/318 (39%), Gaps = 77/318 (24%)
Query: 85 IAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ----------IMQMLD- 133
+ V+G G G V Q + T E A+K +LQD RE++ I++++D
Sbjct: 25 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 83
Query: 134 HPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQIC 193
+ N+ A + C + +SRI R + + +I
Sbjct: 84 YENLYAGRKCLLIVMECLDG----------------GELFSRIQDRGDQAFTEREASEIM 127
Query: 194 R----ALAYIHNCIGICHRDIKPQNLLVKGE-PN-------------------VSYIC-S 228
+ A+ Y+H+ I I HRD+KP+NLL + PN ++ C +
Sbjct: 128 KSIGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 186
Query: 229 RYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 288
YY APE + G +Y + D+WS G +M LL G P F G + G TR
Sbjct: 187 PYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRI 239
Query: 289 EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ +++FP + W +V + E L+ + P R T E HP+
Sbjct: 240 RM-------GQYEFPNPE---WSEVSE-----EVKMLIRNLLKTEPTQRMTITEFMNHPW 284
Query: 349 -FDELRDPNTRLPNGRPL 365
+ P T L R L
Sbjct: 285 IMQSTKVPQTPLHTSRVL 302
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 125/318 (39%), Gaps = 77/318 (24%)
Query: 85 IAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ----------IMQMLD- 133
+ V+G G G V Q + T E A+K +LQD RE++ I++++D
Sbjct: 19 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 77
Query: 134 HPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQIC 193
+ N+ A + C + +SRI R + + +I
Sbjct: 78 YENLYAGRKCLLIVMECLDG----------------GELFSRIQDRGDQAFTEREASEIM 121
Query: 194 R----ALAYIHNCIGICHRDIKPQNLLVKGE-PN-------------------VSYIC-S 228
+ A+ Y+H+ I I HRD+KP+NLL + PN ++ C +
Sbjct: 122 KSIGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 180
Query: 229 RYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 288
YY APE + G +Y + D+WS G +M LL G P F G + G TR
Sbjct: 181 PYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRI 233
Query: 289 EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ +++FP + W +V + E L+ + P R T E HP+
Sbjct: 234 RM-------GQYEFPNPE---WSEVSE-----EVKMLIRNLLKTEPTQRMTITEFMNHPW 278
Query: 349 -FDELRDPNTRLPNGRPL 365
+ P T L R L
Sbjct: 279 IMQSTKVPQTPLHTSRVL 296
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 125/318 (39%), Gaps = 77/318 (24%)
Query: 85 IAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ----------IMQMLD- 133
+ V+G G G V Q + T E A+K +LQD RE++ I++++D
Sbjct: 26 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 84
Query: 134 HPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQIC 193
+ N+ A + C + +SRI R + + +I
Sbjct: 85 YENLYAGRKCLLIVMECLDG----------------GELFSRIQDRGDQAFTEREASEIM 128
Query: 194 R----ALAYIHNCIGICHRDIKPQNLLVKGE-PN-------------------VSYIC-S 228
+ A+ Y+H+ I I HRD+KP+NLL + PN ++ C +
Sbjct: 129 KSIGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 187
Query: 229 RYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 288
YY APE + G +Y + D+WS G +M LL G P F G + G TR
Sbjct: 188 PYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRI 240
Query: 289 EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ +++FP + W +V + E L+ + P R T E HP+
Sbjct: 241 RM-------GQYEFPNPE---WSEVSE-----EVKMLIRNLLKTEPTQRMTITEFMNHPW 285
Query: 349 -FDELRDPNTRLPNGRPL 365
+ P T L R L
Sbjct: 286 IMQSTKVPQTPLHTSRVL 303
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 125/318 (39%), Gaps = 77/318 (24%)
Query: 85 IAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ----------IMQMLD- 133
+ V+G G G V Q + T E A+K +LQD RE++ I++++D
Sbjct: 27 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 85
Query: 134 HPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQIC 193
+ N+ A + C + +SRI R + + +I
Sbjct: 86 YENLYAGRKCLLIVMECLDG----------------GELFSRIQDRGDQAFTEREASEIM 129
Query: 194 R----ALAYIHNCIGICHRDIKPQNLLVKGE-PN-------------------VSYIC-S 228
+ A+ Y+H+ I I HRD+KP+NLL + PN ++ C +
Sbjct: 130 KSIGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 188
Query: 229 RYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 288
YY APE + G +Y + D+WS G +M LL G P F G + G TR
Sbjct: 189 PYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRI 241
Query: 289 EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ +++FP + W +V + E L+ + P R T E HP+
Sbjct: 242 RM-------GQYEFPNPE---WSEVSE-----EVKMLIRNLLKTEPTQRMTITEFMNHPW 286
Query: 349 -FDELRDPNTRLPNGRPL 365
+ P T L R L
Sbjct: 287 IMQSTKVPQTPLHTSRVL 304
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 125/318 (39%), Gaps = 77/318 (24%)
Query: 85 IAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ----------IMQMLD- 133
+ V+G G G V Q + T E A+K +LQD RE++ I++++D
Sbjct: 20 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 78
Query: 134 HPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQIC 193
+ N+ A + C + +SRI R + + +I
Sbjct: 79 YENLYAGRKCLLIVMECLDG----------------GELFSRIQDRGDQAFTEREASEIM 122
Query: 194 R----ALAYIHNCIGICHRDIKPQNLLVKGE-PN-------------------VSYIC-S 228
+ A+ Y+H+ I I HRD+KP+NLL + PN ++ C +
Sbjct: 123 KSIGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 181
Query: 229 RYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 288
YY APE + G +Y + D+WS G +M LL G P F G + G TR
Sbjct: 182 PYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRI 234
Query: 289 EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ +++FP + W +V + E L+ + P R T E HP+
Sbjct: 235 RM-------GQYEFPNPE---WSEVSE-----EVKMLIRNLLKTEPTQRMTITEFMNHPW 279
Query: 349 -FDELRDPNTRLPNGRPL 365
+ P T L R L
Sbjct: 280 IMQSTKVPQTPLHTSRVL 297
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 122/318 (38%), Gaps = 77/318 (24%)
Query: 85 IAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ----------IMQMLD- 133
+ V+G G G V Q + T E A+K +LQD RE++ I++++D
Sbjct: 19 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 77
Query: 134 HPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQIC 193
+ N+ A + C + +SRI R + + +I
Sbjct: 78 YENLYAGRKCLLIVMECLDG----------------GELFSRIQDRGDQAFTEREASEIM 121
Query: 194 R----ALAYIHNCIGICHRDIKPQNLLVKGE-PNVSYICSR------------------- 229
+ A+ Y+H+ I I HRD+KP+NLL + PN +
Sbjct: 122 KSIGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYT 180
Query: 230 -YYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 288
YY APE + G +Y + D+WS G +M LL G P F G + G TR
Sbjct: 181 PYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRI 233
Query: 289 EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ +++FP + W +V + E L+ + P R T E HP+
Sbjct: 234 RM-------GQYEFPNPE---WSEVSE-----EVKMLIRNLLKTEPTQRMTITEFMNHPW 278
Query: 349 -FDELRDPNTRLPNGRPL 365
+ P T L R L
Sbjct: 279 IMQSTKVPQTPLHTSRVL 296
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 113/316 (35%), Gaps = 77/316 (24%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPNIVALKH 142
+G G F F+ +T E+ A K V + K + E+ I + L H ++V H
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF-H 81
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYS--RIHQRMPLIY---VKLYTYQICRALA 197
FF D V + R S +H+R + + Y QI
Sbjct: 82 GFFEDND------------FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 129
Query: 198 YIHNCIGICHRDIKPQNLLVK-------------------GEPNVSYICSRYYRAPELIF 238
Y+H + HRD+K NL + GE + Y APE +
Sbjct: 130 YLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE-VL 187
Query: 239 GATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 298
++ +D+WS GC+M LL+G+P F E C+ Y
Sbjct: 188 SKKGHSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL 225
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR 358
+IK + + K + P A L+ + Q P R T E FF P R
Sbjct: 226 -----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP-AR 277
Query: 359 LP-NGRPLPPLFNFKP 373
LP +PP F+ P
Sbjct: 278 LPITCLTIPPRFSIAP 293
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 113/292 (38%), Gaps = 69/292 (23%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNREL-------QIMQMLDHPNIVALK 141
++G G+FG V K + TG A+K + ++ E+ +++Q HP + ALK
Sbjct: 158 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 217
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+ F T D+ R +S R Y +I AL Y+H+
Sbjct: 218 YSF-QTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR-------FYGAEIVSALDYLHS 269
Query: 202 CIGICHRDIKPQNLLVKGEPNV-------------------SYICSRYYRAPELIFGATE 242
+ +RD+K +NL++ + ++ ++ + Y APE + +
Sbjct: 270 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPE-VLEDND 328
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 302
Y A+D W G VM E++ G+ F + ++L E+I + EEI+
Sbjct: 329 YGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM------EEIR----------- 370
Query: 303 PQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRC-----TALEACVHPFF 349
F + L PEA L+ + P R A E H FF
Sbjct: 371 -----------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 411
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 125/318 (39%), Gaps = 77/318 (24%)
Query: 85 IAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ----------IMQMLD- 133
+ V+G G G V Q + T E A+K +LQD RE++ I++++D
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 79
Query: 134 HPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQIC 193
+ N+ A + C + +SRI R + + +I
Sbjct: 80 YENLYAGRKCLLIVMECLDG----------------GELFSRIQDRGDQAFTEREASEIM 123
Query: 194 R----ALAYIHNCIGICHRDIKPQNLLVKGE-PN-------------------VSYIC-S 228
+ A+ Y+H+ I I HRD+KP+NLL + PN ++ C +
Sbjct: 124 KSIGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 182
Query: 229 RYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 288
YY APE + G +Y + D+WS G +M LL G P F G + G TR
Sbjct: 183 PYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRI 235
Query: 289 EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ +++FP + W +V + E L+ + P R T E HP+
Sbjct: 236 RM-------GQYEFPNPE---WSEVSE-----EVKMLIRNLLKTEPTQRMTITEFMNHPW 280
Query: 349 -FDELRDPNTRLPNGRPL 365
+ P T L R L
Sbjct: 281 IMQSTKVPQTPLHTSRVL 298
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 89/211 (42%), Gaps = 48/211 (22%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK--------RYKNRELQIMQMLDHP 135
Y +GTG F V A TGE+VAIK + DK R K E++ ++ L H
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIK--IMDKNTLGSDLPRIKT-EIEALKNLRHQ 68
Query: 136 NIVALKHCFFSTTDKXXXXXXX----XXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQ 191
+I L H T +K + +R++ +R+ R Q
Sbjct: 69 HICQLYHVL-ETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFR-----------Q 116
Query: 192 ICRALAYIHNCIGICHRDIKPQNLL---------------VKGEPNVSY---IC--SRYY 231
I A+AY+H+ G HRD+KP+NLL K + N Y C S Y
Sbjct: 117 IVSAVAYVHS-QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAY 175
Query: 232 RAPELIFGATEYTTAIDIWSTGCVMAELLLG 262
APELI G + + D+WS G ++ L+ G
Sbjct: 176 AAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 113/292 (38%), Gaps = 69/292 (23%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNREL-------QIMQMLDHPNIVALK 141
++G G+FG V K + TG A+K + ++ E+ +++Q HP + ALK
Sbjct: 155 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 214
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+ F T D+ R +S R Y +I AL Y+H+
Sbjct: 215 YSF-QTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR-------FYGAEIVSALDYLHS 266
Query: 202 CIGICHRDIKPQNLLVKGEPNV-------------------SYICSRYYRAPELIFGATE 242
+ +RD+K +NL++ + ++ ++ + Y APE + +
Sbjct: 267 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPE-VLEDND 325
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 302
Y A+D W G VM E++ G+ F + ++L E+I + EEI+
Sbjct: 326 YGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM------EEIR----------- 367
Query: 303 PQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRC-----TALEACVHPFF 349
F + L PEA L+ + P R A E H FF
Sbjct: 368 -----------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 118/298 (39%), Gaps = 58/298 (19%)
Query: 85 IAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ----------IMQMLD- 133
+ V+G G G V Q + T E A+K +LQD RE++ I++++D
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 79
Query: 134 HPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQIC 193
+ N+ A + C + +SRI R + + +I
Sbjct: 80 YENLYAGRKCLLIVMECLDG----------------GELFSRIQDRGDQAFTEREASEIM 123
Query: 194 R----ALAYIHNCIGICHRDIKPQNLLVKGE-PNVSYICSRYYRAPELIFGATEYTTAID 248
+ A+ Y+H+ I I HRD+KP+NLL + PN + + A E +Y + D
Sbjct: 124 KSIGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT--GEKYDKSCD 180
Query: 249 IWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH 308
+WS G +M LL G P F G + G TR + +++FP +
Sbjct: 181 MWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM-------GQYEFPNPE-- 225
Query: 309 PWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF-FDELRDPNTRLPNGRPL 365
W +V + E L+ + P R T E HP+ + P T L R L
Sbjct: 226 -WSEVSE-----EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVL 277
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 36/203 (17%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCF---- 144
++G+G FG VF+AK R G+ IK+V + RE++ + LDH NIV C+
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFD 77
Query: 145 --------FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
S+ K T+ + R + ++ ++L+ QI + +
Sbjct: 78 YDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK-RRGEKLDKVLALELFE-QITKGV 135
Query: 197 AYIHNCIGICHRDIKPQNLLV-------------------KGEPNVSYICSRYYRAPELI 237
YIH+ + +RD+KP N+ + G+ S RY +PE I
Sbjct: 136 DYIHSK-KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYM-SPEQI 193
Query: 238 FGATEYTTAIDIWSTGCVMAELL 260
+ +Y +D+++ G ++AELL
Sbjct: 194 -SSQDYGKEVDLYALGLILAELL 215
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 113/288 (39%), Gaps = 63/288 (21%)
Query: 90 VGTGSFGVVFQAKCRETGE-----IVAIKKV-LQDKRYKNRELQIMQMLDHPNIVALKHC 143
+G G+F VV + TG+ I+ KK+ +D + RE +I ++L HPNIV L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
+ + + +AR Y I QI ++ + H
Sbjct: 72 I--SEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI------QQILESVNHCH-LN 122
Query: 204 GICHRDIKPQNLL--------------------VKGEPNV--SYICSRYYRAPELIFGAT 241
GI HRD+KP+NLL V+G+ + + Y +PE +
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPE-VLRKD 181
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 301
Y +D+W+ G ++ LL+G P F E +L + IK +
Sbjct: 182 PYGKPVDMWACGVILYILLVGYPPFWDEDQ-HRLYQQIKA----------------GAYD 224
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFF 349
FP + W V PEA DL+ + +P R TA EA HP+
Sbjct: 225 FPSPE---WDTV-----TPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 82/201 (40%), Gaps = 38/201 (18%)
Query: 93 GSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRE-----LQIMQMLDHPNIVALKHCFFST 147
G FG V++A+ +ET ++A KV+ K + E + I+ DHPNIV L F+
Sbjct: 21 GDFGKVYKAQNKETS-VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE 79
Query: 148 TDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGICH 207
+ + + R + +++ Q AL Y+H+ I H
Sbjct: 80 NNLWILIEFCAGGAVDAVMLELERPLTESQ-------IQVVCKQTLDALNYLHDN-KIIH 131
Query: 208 RDIKPQNLLVKGEPNV--------------------SYICSRYYRAPELIFGATE----Y 243
RD+K N+L + ++ S+I + Y+ APE++ T Y
Sbjct: 132 RDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPY 191
Query: 244 TTAIDIWSTGCVMAELLLGQP 264
D+WS G + E+ +P
Sbjct: 192 DYKADVWSLGITLIEMAEIEP 212
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 110/292 (37%), Gaps = 69/292 (23%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNREL-------QIMQMLDHPNIVALK 141
++G G+FG V K + TG A+K + ++ E+ +++Q HP + ALK
Sbjct: 17 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 76
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+ F T D+ R +S R Y +I AL Y+H+
Sbjct: 77 YSF-QTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR-------FYGAEIVSALDYLHS 128
Query: 202 CIGICHRDIKPQNLL------------------VKGEPNVSYICSR-YYRAPELIFGATE 242
+ +RD+K +NL+ +K + C Y APE + +
Sbjct: 129 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPE-VLEDND 187
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 302
Y A+D W G VM E++ G+ F + ++L E+I + EEI+
Sbjct: 188 YGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM------EEIR----------- 229
Query: 303 PQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRC-----TALEACVHPFF 349
F + L PEA L+ + P R A E H FF
Sbjct: 230 -----------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 270
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 107/291 (36%), Gaps = 56/291 (19%)
Query: 83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQI-MQMLDHPNIVALK 141
Y + +G GS+ V + + T A+K + + KR E++I ++ HPNI+ LK
Sbjct: 23 GYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLK 82
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+ D +++I R + + + I + + Y+H
Sbjct: 83 DVY---DDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVL-----FTITKTVEYLH- 133
Query: 202 CIGICHRDIKPQNLLV---KGEPNVSYIC--------------------SRYYRAPELIF 238
G+ HRD+KP N+L G P IC + + APE +
Sbjct: 134 AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPE-VL 192
Query: 239 GATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 298
Y A DIWS G ++ +L G F D EI+ +G+
Sbjct: 193 ERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD-DTPEEILARIGSG------------- 238
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFF 349
KF + W+ V A DLV + P+ R TA HP+
Sbjct: 239 --KF-SLSGGYWNSV-----SDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 110/292 (37%), Gaps = 69/292 (23%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNREL-------QIMQMLDHPNIVALK 141
++G G+FG V K + TG A+K + ++ E+ +++Q HP + ALK
Sbjct: 15 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 74
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+ F T D+ R +S R Y +I AL Y+H+
Sbjct: 75 YSF-QTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR-------FYGAEIVSALDYLHS 126
Query: 202 CIGICHRDIKPQNLL------------------VKGEPNVSYICSR-YYRAPELIFGATE 242
+ +RD+K +NL+ +K + C Y APE + +
Sbjct: 127 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPE-VLEDND 185
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 302
Y A+D W G VM E++ G+ F + ++L E+I + EEI+
Sbjct: 186 YGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM------EEIR----------- 227
Query: 303 PQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRC-----TALEACVHPFF 349
F + L PEA L+ + P R A E H FF
Sbjct: 228 -----------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 268
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 113/288 (39%), Gaps = 63/288 (21%)
Query: 90 VGTGSFGVVFQAKCRETGE-----IVAIKKV-LQDKRYKNRELQIMQMLDHPNIVALKHC 143
+G G+F VV + TG+ I+ KK+ +D + RE +I ++L HPNIV L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
+ + + +AR Y I QI ++ + H
Sbjct: 72 I--SEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI------QQILESVNHCH-LN 122
Query: 204 GICHRDIKPQNLL--------------------VKGEPNV--SYICSRYYRAPELIFGAT 241
GI HRD+KP+NLL V+G+ + + Y +PE +
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPE-VLRKD 181
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 301
Y +D+W+ G ++ LL+G P F E +L + IK +
Sbjct: 182 PYGKPVDMWACGVILYILLVGYPPFWDEDQ-HRLYQQIKA----------------GAYD 224
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFF 349
FP + W V PEA DL+ + +P R TA EA HP+
Sbjct: 225 FPSPE---WDTV-----TPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 47/216 (21%)
Query: 88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCF--F 145
++G+G FG VF+AK R G+ I++V + RE++ + LDH NIV C+ F
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGF 77
Query: 146 STTDKXXXXXXXXXXXXXXTVNRIARNYSR-----------------IHQRM-----PLI 183
+ +R+ ++ I +R ++
Sbjct: 78 DYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVL 137
Query: 184 YVKLYTYQICRALAYIHNCIGICHRDIKPQNLLV-------------------KGEPNVS 224
++L+ QI + + YIH+ + HRD+KP N+ + G+ S
Sbjct: 138 ALELFE-QITKGVDYIHSK-KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRS 195
Query: 225 YICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELL 260
RY +PE I + +Y +D+++ G ++AELL
Sbjct: 196 KGTLRYM-SPEQI-SSQDYGKEVDLYALGLILAELL 229
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 110/292 (37%), Gaps = 69/292 (23%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNREL-------QIMQMLDHPNIVALK 141
++G G+FG V K + TG A+K + ++ E+ +++Q HP + ALK
Sbjct: 16 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 75
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+ F T D+ R +S R Y +I AL Y+H+
Sbjct: 76 YSF-QTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR-------FYGAEIVSALDYLHS 127
Query: 202 CIGICHRDIKPQNLL------------------VKGEPNVSYICSR-YYRAPELIFGATE 242
+ +RD+K +NL+ +K + C Y APE + +
Sbjct: 128 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPE-VLEDND 186
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 302
Y A+D W G VM E++ G+ F + ++L E+I + EEI+
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM------EEIR----------- 228
Query: 303 PQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRC-----TALEACVHPFF 349
F + L PEA L+ + P R A E H FF
Sbjct: 229 -----------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 269
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 112/287 (39%), Gaps = 58/287 (20%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV-----LQDKRYKNRELQI-MQMLDHPNIVALKHC 143
+G G++GVV + + +G+I A+K++ Q+++ +L I + +D P V
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
F D ++++ + Q +P + I +AL ++H+ +
Sbjct: 102 LFREGD-----VWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 156
Query: 204 GICHRDIKPQNLLVKGEPNV---SYICSRY---------------YRAPELI---FGATE 242
+ HRD+KP N+L+ V + S Y Y APE I
Sbjct: 157 SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKG 216
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 302
Y+ DIWS G EL + + FP +S GTP ++
Sbjct: 217 YSVKSDIWSLGITXIELAILR--FPYDS-----------WGTPFQQ-------------L 250
Query: 303 PQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFF 349
Q+ P ++ + E VD + + + R T E HPFF
Sbjct: 251 KQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 99/228 (43%), Gaps = 43/228 (18%)
Query: 70 TIGG-RNGNSKQKVSYIAEHVVGTGSFGVVFQA-KCRETGEI--VAIKKVLQDKRYKNRE 125
++GG + G +++ V + ++G G FG V++ GE VA+K +D N+E
Sbjct: 1 SMGGPQYGIAREDV--VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE 58
Query: 126 -----LQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM 180
IM+ LDHP+IV L ++ + + RN +
Sbjct: 59 KFMSEAVIMKNLDHPHIVKL----IGIIEEEPTWIIMELYPYGELGHYLERN----KNSL 110
Query: 181 PLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGEPNV---SYICSRY------- 230
++ + LY+ QIC+A+AY+ + I HRDI +N+LV V + SRY
Sbjct: 111 KVLTLVLYSLQICKAMAYLES-INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY 169
Query: 231 ----------YRAPELIFGATEYTTAIDIWSTGCVMAELLL--GQPLF 266
+ +PE I +TTA D+W M E+L QP F
Sbjct: 170 KASVTRLPIKWMSPESI-NFRRFTTASDVWMFAVCMWEILSFGKQPFF 216
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 46/225 (20%)
Query: 89 VVGTGSFGVVF---QAKCRETGEIVAIK-----KVLQDKRYKNRELQIMQMLDH----PN 136
V+GTG++G VF + +TG++ A+K ++Q + Q+L+H P
Sbjct: 61 VLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 120
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIY--VKLYTYQICR 194
+V L + F + T +N ++ + QR V++Y +I
Sbjct: 121 LVTLHYAFQTET---------KLHLILDYING-GELFTHLSQRERFTEHEVQIYVGEIVL 170
Query: 195 ALAYIHNCIGICHRDIKPQNLLVKGEPNV--------------------SYICSRYYRAP 234
AL ++H +GI +RDIK +N+L+ +V + + Y AP
Sbjct: 171 ALEHLHK-LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAP 229
Query: 235 ELIFGA-TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEI 278
+++ G + + A+D WS G +M ELL G F + + EI
Sbjct: 230 DIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI 274
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 40/227 (17%)
Query: 83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ-------DKRYKNRELQIMQMLDHP 135
Y V+G G+FG V + + + ++ A+K + + D + E IM + P
Sbjct: 76 DYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 135
Query: 136 NIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRA 195
+V L F + D VN ++ NY +P + K YT ++ A
Sbjct: 136 WVVQL---FCAFQDDKYLYMVMEYMPGGDLVNLMS-NYD-----VPEKWAKFYTAEVVLA 186
Query: 196 LAYIHNCIGICHRDIKPQNLLVKGEPNV--------------------SYICSRYYRAPE 235
L IH+ +G+ HRD+KP N+L+ ++ + + + Y +PE
Sbjct: 187 LDAIHS-MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPE 245
Query: 236 LI---FGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEII 279
++ G Y D WS G + E+L+G F +S V +I+
Sbjct: 246 VLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIM 292
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 90/220 (40%), Gaps = 43/220 (19%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR----ELQIMQMLD-HPNIVALKHC 143
V+ G F V++A+ +G A+K++L ++ KNR E+ M+ L HPNIV
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPL---IYVKLYTYQICRALAYIH 200
++ ++ ++ R PL +K++ YQ CRA+ ++H
Sbjct: 95 ASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIF-YQTCRAVQHMH 153
Query: 201 NCIG-ICHRDIKPQNLLVKGE-----------------PNVSYICSR------------- 229
I HRD+K +NLL+ + P+ S+ R
Sbjct: 154 RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTT 213
Query: 230 -YYRAPELIFGATEYTTA--IDIWSTGCVMAELLLGQPLF 266
YR PE+I + + DIW+ GC++ L Q F
Sbjct: 214 PMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF 253
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 77/196 (39%), Gaps = 32/196 (16%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK---NRELQIMQMLDHPNIVALKHCFFS 146
+G G+FGV + ++ E+VA+K + + ++ RE+ + L HPNIV K +
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 147 TTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGIC 206
T + R +S R + Q+ ++Y H + +
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGR-FSEDEAR-------FFFQQLISGVSYAH-AMQVA 137
Query: 207 HRDIKPQNLLVKGEPN--------------------VSYICSRYYRAPELIFGATEYTTA 246
HRD+K +N L+ G P S + + Y APE++
Sbjct: 138 HRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKV 197
Query: 247 IDIWSTGCVMAELLLG 262
D+WS G + +L+G
Sbjct: 198 ADVWSCGVTLYVMLVG 213
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 40/212 (18%)
Query: 85 IAEHVVGTGSFGVVFQA-KCRETGEI--VAIKKVLQDKRYKNRE-----LQIMQMLDHPN 136
+ ++G G FG V++ GE VA+K +D N+E IM+ LDHP+
Sbjct: 27 VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPH 86
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
IV L ++ + + RN + ++ + LY+ QIC+A+
Sbjct: 87 IVKL----IGIIEEEPTWIIMELYPYGELGHYLERN----KNSLKVLTLVLYSLQICKAM 138
Query: 197 AYIHNCIGICHRDIKPQNLLVKGEPNV---SYICSRY-----------------YRAPEL 236
AY+ + I HRDI +N+LV V + SRY + +PE
Sbjct: 139 AYLES-INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES 197
Query: 237 IFGATEYTTAIDIWSTGCVMAELLL--GQPLF 266
I +TTA D+W M E+L QP F
Sbjct: 198 I-NFRRFTTASDVWMFAVCMWEILSFGKQPFF 228
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 112/285 (39%), Gaps = 65/285 (22%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRE-----------LQIMQMLDHPNI 137
++G G FG V+ + +TG++ A+K L KR K ++ L ++ D P I
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMK-CLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 254
Query: 138 VALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYS-RIHQRMPLIYVKLYTYQICRAL 196
V + + F T DK +N +Y H ++ Y +I L
Sbjct: 255 VCMSYAF-HTPDKLSFILD--------LMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 197 AYIHNCIGICHRDIKPQNLLV------------------KGEPNVSYICSRYYRAPELIF 238
++HN + +RD+KP N+L+ K +P+ S + + Y APE++
Sbjct: 306 EHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQ 363
Query: 239 GATEYTTAIDIWSTGCVMAELLLGQPLF-----PGESGVDQLVEIIKV------------ 281
Y ++ D +S GC++ +LL G F + +D++ + V
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRS 423
Query: 282 -----LGTPTREEIKCMNPNYTEFK-FPQIKPHPWHKVFQKRLPP 320
L + C+ E K P + W VF ++ PP
Sbjct: 424 LLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPP 468
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 121/303 (39%), Gaps = 64/303 (21%)
Query: 75 NGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETG-----EIVAIKKV-LQDKRYKNRELQI 128
N ++K +Y + +G G+F VV + + TG +I+ KK+ +D + RE +I
Sbjct: 22 NASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARI 81
Query: 129 MQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLY 188
+ L HPNIV L + + +AR + I
Sbjct: 82 CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI--VAREFYSEADASHCI----- 134
Query: 189 TYQICRALAYIHNCIGICHRDIKPQNLLV----KG------------EPNVS-----YIC 227
QI ++AY H+ GI HR++KP+NLL+ KG E N S +
Sbjct: 135 -QQILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAG 192
Query: 228 SRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 287
+ Y +PE + Y+ +DIW+ G ++ LL+G P F E DQ
Sbjct: 193 TPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWDE---DQ---------HRLY 239
Query: 288 EEIKCMNPNYTEFKFPQIKPHP-WHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVH 346
+IK +Y P P W V PEA L+ +P R TA +A
Sbjct: 240 AQIKAGAYDY---------PSPEWDTV-----TPEAKSLIDSMLTVNPKKRITADQALKV 285
Query: 347 PFF 349
P+
Sbjct: 286 PWI 288
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 112/285 (39%), Gaps = 65/285 (22%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRE-----------LQIMQMLDHPNI 137
++G G FG V+ + +TG++ A+K L KR K ++ L ++ D P I
Sbjct: 195 IIGRGGFGEVYGCRKADTGKMYAMK-CLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 253
Query: 138 VALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYS-RIHQRMPLIYVKLYTYQICRAL 196
V + + F T DK +N +Y H ++ Y +I L
Sbjct: 254 VCMSYAF-HTPDKLSFILD--------LMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 304
Query: 197 AYIHNCIGICHRDIKPQNLLV------------------KGEPNVSYICSRYYRAPELIF 238
++HN + +RD+KP N+L+ K +P+ S + + Y APE++
Sbjct: 305 EHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQ 362
Query: 239 GATEYTTAIDIWSTGCVMAELLLGQPLF-----PGESGVDQLVEIIKV------------ 281
Y ++ D +S GC++ +LL G F + +D++ + V
Sbjct: 363 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRS 422
Query: 282 -----LGTPTREEIKCMNPNYTEFK-FPQIKPHPWHKVFQKRLPP 320
L + C+ E K P + W VF ++ PP
Sbjct: 423 LLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPP 467
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 107/291 (36%), Gaps = 56/291 (19%)
Query: 83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQI-MQMLDHPNIVALK 141
Y + +G GS+ V + + T A+K + + KR E++I ++ HPNI+ LK
Sbjct: 23 GYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLK 82
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+ D +++I R + + + I + + Y+H
Sbjct: 83 DVY---DDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVL-----FTITKTVEYLH- 133
Query: 202 CIGICHRDIKPQNLLV---KGEPNVSYIC--------------------SRYYRAPELIF 238
G+ HRD+KP N+L G P IC + + APE +
Sbjct: 134 AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPE-VL 192
Query: 239 GATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 298
Y A DIWS G ++ L G F D EI+ +G+
Sbjct: 193 ERQGYDAACDIWSLGVLLYTXLTGYTPFANGPD-DTPEEILARIGSG------------- 238
Query: 299 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFF 349
KF + W+ V A DLV + P+ R TA HP+
Sbjct: 239 --KF-SLSGGYWNSV-----SDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 91/216 (42%), Gaps = 40/216 (18%)
Query: 85 IAEHVVGTGSFGVVFQA-KCRETGEI--VAIKKVLQDKRYKNRE-----LQIMQMLDHPN 136
+ ++G G FG V++ GE VA+K +D N+E IM+ LDHP+
Sbjct: 11 VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPH 70
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
IV L ++ + + RN + ++ + LY+ QIC+A+
Sbjct: 71 IVKL----IGIIEEEPTWIIMELYPYGELGHYLERN----KNSLKVLTLVLYSLQICKAM 122
Query: 197 AYIHNCIGICHRDIKPQNLLVKGEPNV---SYICSRY-----------------YRAPEL 236
AY+ + I HRDI +N+LV V + SRY + +PE
Sbjct: 123 AYLES-INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES 181
Query: 237 IFGATEYTTAIDIWSTGCVMAELLL--GQPLFPGES 270
I +TTA D+W M E+L QP F E+
Sbjct: 182 I-NFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN 216
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 109/277 (39%), Gaps = 62/277 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK---NRELQIMQMLD-HPNIVALKHCFF 145
+G GSF + + +++ + A+K + KR + +E+ +++ + HPNIV L F
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKII--SKRMEANTQKEITALKLCEGHPNIVKLHEVFH 76
Query: 146 STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGI 205
D+ RI + I KL + A++++H+ +G+
Sbjct: 77 ---DQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVS-----AVSHMHD-VGV 127
Query: 206 CHRDIKPQNLLVKGEPN------VSYICSR----------------YYRAPELIFGATEY 243
HRD+KP+NLL E + + + +R +Y APEL+ Y
Sbjct: 128 VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELL-NQNGY 186
Query: 244 TTAIDIWSTGCVMAELLLGQPLFPGES---GVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
+ D+WS G ++ +L GQ F VEI+K + +F
Sbjct: 187 DESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKK-------------GDF 233
Query: 301 KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLR 337
F + W V Q EA DL+ PN R
Sbjct: 234 SF---EGEAWKNVSQ-----EAKDLIQGLLTVDPNKR 262
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 112/285 (39%), Gaps = 65/285 (22%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRE-----------LQIMQMLDHPNI 137
++G G FG V+ + +TG++ A+K L KR K ++ L ++ D P I
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMK-CLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 254
Query: 138 VALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYS-RIHQRMPLIYVKLYTYQICRAL 196
V + + F T DK +N +Y H ++ Y +I L
Sbjct: 255 VCMSYAF-HTPDKLSFILD--------LMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 197 AYIHNCIGICHRDIKPQNLLV------------------KGEPNVSYICSRYYRAPELIF 238
++HN + +RD+KP N+L+ K +P+ S + + Y APE++
Sbjct: 306 EHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQ 363
Query: 239 GATEYTTAIDIWSTGCVMAELLLGQPLF-----PGESGVDQLVEIIKV------------ 281
Y ++ D +S GC++ +LL G F + +D++ + V
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRS 423
Query: 282 -----LGTPTREEIKCMNPNYTEFK-FPQIKPHPWHKVFQKRLPP 320
L + C+ E K P + W VF ++ PP
Sbjct: 424 LLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPP 468
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 112/285 (39%), Gaps = 65/285 (22%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRE-----------LQIMQMLDHPNI 137
++G G FG V+ + +TG++ A+K L KR K ++ L ++ D P I
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMK-CLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 254
Query: 138 VALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYS-RIHQRMPLIYVKLYTYQICRAL 196
V + + F T DK +N +Y H ++ Y +I L
Sbjct: 255 VCMSYAF-HTPDKLSFILD--------LMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 197 AYIHNCIGICHRDIKPQNLLV------------------KGEPNVSYICSRYYRAPELIF 238
++HN + +RD+KP N+L+ K +P+ S + + Y APE++
Sbjct: 306 EHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQ 363
Query: 239 GATEYTTAIDIWSTGCVMAELLLGQPLF-----PGESGVDQLVEIIKV------------ 281
Y ++ D +S GC++ +LL G F + +D++ + V
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRS 423
Query: 282 -----LGTPTREEIKCMNPNYTEFK-FPQIKPHPWHKVFQKRLPP 320
L + C+ E K P + W VF ++ PP
Sbjct: 424 LLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPP 468
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 115/292 (39%), Gaps = 70/292 (23%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNREL-------QIMQMLDHPNIVALK 141
++G G+FG V + + TG A+K + ++ E+ +++Q HP + ALK
Sbjct: 15 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 74
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+ F T D+ ++R +R + Y +I AL Y+H+
Sbjct: 75 YA-FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEER-----ARFYGAEIVSALEYLHS 126
Query: 202 CIGICHRDIKPQNLLVKGEPNV-------------------SYICSRYYRAPELIFGATE 242
+ +RDIK +NL++ + ++ ++ + Y APE + +
Sbjct: 127 R-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE-VLEDND 184
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 302
Y A+D W G VM E++ G+ F + ++L E+I + EEI+
Sbjct: 185 YGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR----------- 226
Query: 303 PQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLR-----CTALEACVHPFF 349
F + L PEA L+ + P R A E H FF
Sbjct: 227 -----------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 267
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 93/243 (38%), Gaps = 77/243 (31%)
Query: 185 VKLYTYQICRALAYIHNCIGICHRDIKPQNLL---------------------------- 216
V+ Y + +AL IH GI HRD+KP N L
Sbjct: 119 VREYMLNLFKALKRIHQ-FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLK 177
Query: 217 -VKGEP-------NVSYIC-SRY-----------YRAPELIFGATEYTTAIDIWSTGCVM 256
V+ E N IC SR +RAPE++ TTAID+WS G +
Sbjct: 178 FVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIF 237
Query: 257 AELLLGQ-PLFPGESGVDQLVEIIKVLGT--------------------PTR------EE 289
LL G+ P + + L +I+ + G+ P + E
Sbjct: 238 LSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCER 297
Query: 290 IKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFF 349
++ M+ + + I+ H + +P EA DL+ + +P R TA EA +HPFF
Sbjct: 298 LRGMDSSTPKLT-SDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFF 356
Query: 350 DEL 352
++
Sbjct: 357 KDM 359
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 115/292 (39%), Gaps = 70/292 (23%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNREL-------QIMQMLDHPNIVALK 141
++G G+FG V + + TG A+K + ++ E+ +++Q HP + ALK
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+ F T D+ ++R +R + Y +I AL Y+H+
Sbjct: 72 YA-FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEER-----ARFYGAEIVSALEYLHS 123
Query: 202 CIGICHRDIKPQNLLVKGEPNV-------------------SYICSRYYRAPELIFGATE 242
+ +RDIK +NL++ + ++ ++ + Y APE + +
Sbjct: 124 R-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE-VLEDND 181
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 302
Y A+D W G VM E++ G+ F + ++L E+I + EEI+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR----------- 223
Query: 303 PQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLR-----CTALEACVHPFF 349
F + L PEA L+ + P R A E H FF
Sbjct: 224 -----------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 115/292 (39%), Gaps = 70/292 (23%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNREL-------QIMQMLDHPNIVALK 141
++G G+FG V + + TG A+K + ++ E+ +++Q HP + ALK
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+ F T D+ ++R +R + Y +I AL Y+H+
Sbjct: 72 YA-FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEER-----ARFYGAEIVSALEYLHS 123
Query: 202 CIGICHRDIKPQNLLVKGEPNV-------------------SYICSRYYRAPELIFGATE 242
+ +RDIK +NL++ + ++ ++ + Y APE + +
Sbjct: 124 R-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE-VLEDND 181
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 302
Y A+D W G VM E++ G+ F + ++L E+I + EEI+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR----------- 223
Query: 303 PQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLR-----CTALEACVHPFF 349
F + L PEA L+ + P R A E H FF
Sbjct: 224 -----------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 114/292 (39%), Gaps = 70/292 (23%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNREL-------QIMQMLDHPNIVALK 141
++G G+FG V + + TG A+K + ++ E+ +++Q HP + ALK
Sbjct: 17 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 76
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+ F T D+ ++R +R + Y +I AL Y+H+
Sbjct: 77 YA-FQTHDR--LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAEIVSALEYLHS 128
Query: 202 CIGICHRDIKPQNLLVKGEPNVSY----ICSR---------------YYRAPELIFGATE 242
+ +RDIK +NL++ + ++ +C Y APE + +
Sbjct: 129 R-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE-VLEDND 186
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 302
Y A+D W G VM E++ G+ F + ++L E+I + EEI+
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR----------- 228
Query: 303 PQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLR-----CTALEACVHPFF 349
F + L PEA L+ + P R A E H FF
Sbjct: 229 -----------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 269
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 114/292 (39%), Gaps = 70/292 (23%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNREL-------QIMQMLDHPNIVALK 141
++G G+FG V + + TG A+K + ++ E+ +++Q HP + ALK
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+ F T D+ ++R +R + Y +I AL Y+H+
Sbjct: 72 YA-FQTHDR--LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAEIVSALEYLHS 123
Query: 202 CIGICHRDIKPQNLLVKGEPNVSY----ICSR---------------YYRAPELIFGATE 242
+ +RDIK +NL++ + ++ +C Y APE + +
Sbjct: 124 R-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE-VLEDND 181
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 302
Y A+D W G VM E++ G+ F + ++L E+I + EEI+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR----------- 223
Query: 303 PQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLR-----CTALEACVHPFF 349
F + L PEA L+ + P R A E H FF
Sbjct: 224 -----------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 114/292 (39%), Gaps = 70/292 (23%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNREL-------QIMQMLDHPNIVALK 141
++G G+FG V + + TG A+K + ++ E+ +++Q HP + ALK
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+ F T D+ ++R +R + Y +I AL Y+H+
Sbjct: 72 YA-FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEER-----ARFYGAEIVSALEYLHS 123
Query: 202 CIGICHRDIKPQNLLVKGEPNVSY----ICSR---------------YYRAPELIFGATE 242
+ +RDIK +NL++ + ++ +C Y APE + +
Sbjct: 124 R-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE-VLEDND 181
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 302
Y A+D W G VM E++ G+ F + ++L E+I + EEI+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR----------- 223
Query: 303 PQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLR-----CTALEACVHPFF 349
F + L PEA L+ + P R A E H FF
Sbjct: 224 -----------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 120/306 (39%), Gaps = 54/306 (17%)
Query: 85 IAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCF 144
+++ V+G G G V + R TG+ A+K + + + Q P+IV + +
Sbjct: 13 LSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVY 72
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICR----ALAYIH 200
+ + +SRI +R + + +I R A+ ++H
Sbjct: 73 ENMHHGKRCLLIIMECMEGGEL------FSRIQERGDQAFTEREAAEIMRDIGTAIQFLH 126
Query: 201 NCIGICHRDIKPQNLLVKGEPNVSYI-------------------C-SRYYRAPELIFGA 240
+ I HRD+KP+NLL + + + C + YY APE + G
Sbjct: 127 SH-NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPE-VLGP 184
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
+Y + D+WS G +M LL G P F +G + + + I+ ++
Sbjct: 185 EKYDKSCDMWSLGVIMYILLCGFPPFYSNTG--------QAISPGMKRRIRL-----GQY 231
Query: 301 KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDE-LRDPNTRL 359
FP + W +V + +A L+ + P R T + HP+ ++ + P T L
Sbjct: 232 GFPNPE---WSEVSE-----DAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPL 283
Query: 360 PNGRPL 365
R L
Sbjct: 284 HTARVL 289
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 114/305 (37%), Gaps = 74/305 (24%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIK------------KVLQDKRYKNRELQIM-Q 130
Y + V+G G VV + R TG A+K ++ + + RE I+ Q
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 131 MLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIY--VKLY 188
+ HP+I+ L + S++ + R + + +++ L +
Sbjct: 156 VAGHPHIITLIDSYESSS----------FMFLVFDLMRKGELFDYLTEKVALSEKETRSI 205
Query: 189 TYQICRALAYIHNCIGICHRDIKPQNLLVK------------------GEPNVSYICSRY 230
+ A++++H I HRD+KP+N+L+ GE +
Sbjct: 206 MRSLLEAVSFLH-ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPG 264
Query: 231 YRAPELIFGATE-----YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTP 285
Y APE++ + + Y +D+W+ G ++ LL G P F + L I
Sbjct: 265 YLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMI------- 317
Query: 286 TREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACV 345
M Y +F P+ W DL+ R Q P R TA +A
Sbjct: 318 -------MEGQY-QFSSPE-----WDDR-----SSTVKDLISRLLQVDPEARLTAEQALQ 359
Query: 346 HPFFD 350
HPFF+
Sbjct: 360 HPFFE 364
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 114/292 (39%), Gaps = 70/292 (23%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNREL-------QIMQMLDHPNIVALK 141
++G G+FG V + + TG A+K + ++ E+ +++Q HP + ALK
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+ F T D+ ++R +R + Y +I AL Y+H+
Sbjct: 72 YA-FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEER-----ARFYGAEIVSALEYLHS 123
Query: 202 CIGICHRDIKPQNLLVKGEPNVSY----ICSR---------------YYRAPELIFGATE 242
+ +RDIK +NL++ + ++ +C Y APE + +
Sbjct: 124 R-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE-VLEDND 181
Query: 243 YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 302
Y A+D W G VM E++ G+ F + ++L E+I + EEI+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR----------- 223
Query: 303 PQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLR-----CTALEACVHPFF 349
F + L PEA L+ + P R A E H FF
Sbjct: 224 -----------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 120/306 (39%), Gaps = 54/306 (17%)
Query: 85 IAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCF 144
+++ V+G G G V + R TG+ A+K + + + Q P+IV + +
Sbjct: 32 LSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVY 91
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICR----ALAYIH 200
+ + +SRI +R + + +I R A+ ++H
Sbjct: 92 ENMHHGKRCLLIIMECMEGGEL------FSRIQERGDQAFTEREAAEIMRDIGTAIQFLH 145
Query: 201 NCIGICHRDIKPQNLLVKGEPNVSYI-------------------C-SRYYRAPELIFGA 240
+ I HRD+KP+NLL + + + C + YY APE + G
Sbjct: 146 SH-NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPE-VLGP 203
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
+Y + D+WS G +M LL G P F +G + + + I+ ++
Sbjct: 204 EKYDKSCDMWSLGVIMYILLCGFPPFYSNTG--------QAISPGMKRRIRL-----GQY 250
Query: 301 KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDE-LRDPNTRL 359
FP + W +V + +A L+ + P R T + HP+ ++ + P T L
Sbjct: 251 GFPNPE---WSEVSE-----DAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPL 302
Query: 360 PNGRPL 365
R L
Sbjct: 303 HTARVL 308
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 121/318 (38%), Gaps = 77/318 (24%)
Query: 85 IAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ----------IMQMLD- 133
+ V+G G G V Q + T E A+K LQD RE++ I++++D
Sbjct: 65 VTSQVLGLGINGKVLQIFNKRTQEKFALK-XLQDCPKARREVELHWRASQCPHIVRIVDV 123
Query: 134 HPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQIC 193
+ N+ A + C + +SRI R + + +I
Sbjct: 124 YENLYAGRKCLLIVXECLDG----------------GELFSRIQDRGDQAFTEREASEIX 167
Query: 194 R----ALAYIHNCIGICHRDIKPQNLLVKGE-PN-------------------VSYIC-S 228
+ A+ Y+H+ I I HRD+KP+NLL + PN ++ C +
Sbjct: 168 KSIGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 226
Query: 229 RYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 288
YY APE + G +Y + D WS G + LL G P F G + G TR
Sbjct: 227 PYYVAPE-VLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHG------LAISPGXKTR- 278
Query: 289 EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ EF P+ W +V + E L+ + P R T E HP+
Sbjct: 279 ----IRXGQYEFPNPE-----WSEVSE-----EVKXLIRNLLKTEPTQRXTITEFXNHPW 324
Query: 349 FDE-LRDPNTRLPNGRPL 365
+ + P T L R L
Sbjct: 325 IXQSTKVPQTPLHTSRVL 342
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 113/287 (39%), Gaps = 63/287 (21%)
Query: 90 VGTGSFGVVFQAKCRETG-----EIVAIKKV-LQDKRYKNRELQIMQMLDHPNIVALKHC 143
+G G+F VV + TG +I+ KK+ +D + RE +I ++L H NIV L
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
+ + + +AR Y I QI A+ + H +
Sbjct: 72 I--SEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ------QILEAVLHCHQ-M 122
Query: 204 GICHRDIKPQNLL--------------------VKGEPNV--SYICSRYYRAPELIFGAT 241
G+ HRD+KP+NLL V+G+ + + Y +PE +
Sbjct: 123 GVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPE-VLRKE 181
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 301
Y +DIW+ G ++ LL+G P F E +L + IK +
Sbjct: 182 AYGKPVDIWACGVILYILLVGYPPFWDEDQ-HKLYQQIKA----------------GAYD 224
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
FP + W V PEA +L+ + +P R TA EA HP+
Sbjct: 225 FPSPE---WDTV-----TPEAKNLINQMLTINPAKRITAHEALKHPW 263
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 87/228 (38%), Gaps = 68/228 (29%)
Query: 185 VKLYTYQICRALAYIHNCIGICHRDIKPQNLLV--------------------------- 217
+KLY +I +AL Y+ + + H D+KP+N+L+
Sbjct: 139 IKLYCIEILKALNYLRK-MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTK 197
Query: 218 --------------KGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQ 263
K + + S I +R YRAPE+I + + D+WS GCV+AEL G
Sbjct: 198 STGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLG-WDVSSDMWSFGCVLAELYTGS 256
Query: 264 PLFPGESGVDQLVEIIKVL----------GTPTREEIKCMNPNYTEFKFPQ--------- 304
LF ++ L + ++ T T K +N + + +P+
Sbjct: 257 LLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGS-KYVNKDELKLAWPENASSINSIK 315
Query: 305 --IKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFD 350
K P +K+ + L D + Q P LR + E H F +
Sbjct: 316 HVKKCLPLYKIIKHEL---FCDFLYSILQIDPTLRPSPAELLKHKFLE 360
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 77/208 (37%), Gaps = 30/208 (14%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-----RELQIMQMLDHPNIV 138
Y + V+G+G+ VV A C E VAIK++ +K + +E+Q M HPNIV
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 76
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
+ F + + I + + ++ L Y
Sbjct: 77 SYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEY 136
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV------------------------SYICSRYYRAP 234
+H G HRD+K N+L+ + +V +++ + + AP
Sbjct: 137 LHKN-GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAP 195
Query: 235 ELIFGATEYTTAIDIWSTGCVMAELLLG 262
E++ Y DIWS G EL G
Sbjct: 196 EVMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 113/287 (39%), Gaps = 63/287 (21%)
Query: 90 VGTGSFGVVFQAKCRE-----TGEIVAIKKV-LQDKRYKNRELQIMQMLDHPNIVALKHC 143
+G G+F VV + + +I+ KK+ +D + RE +I ++L HPNIV L
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
+ + + +AR Y I+ QI ++ +IH
Sbjct: 99 I--SEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIH------QILESVNHIHQH- 149
Query: 204 GICHRDIKPQNLL--------------------VKGEPNV--SYICSRYYRAPELIFGAT 241
I HRD+KP+NLL V+GE + + Y +PE +
Sbjct: 150 DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPE-VLRKD 208
Query: 242 EYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 301
Y +DIW+ G ++ LL+G P F E +L + IK +
Sbjct: 209 PYGKPVDIWACGVILYILLVGYPPFWDEDQ-HKLYQQIKA----------------GAYD 251
Query: 302 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
FP + W V PEA +L+ + +P R TA +A HP+
Sbjct: 252 FPSPE---WDTV-----TPEAKNLINQMLTINPAKRITADQALKHPW 290
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 77/208 (37%), Gaps = 30/208 (14%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-----RELQIMQMLDHPNIV 138
Y + V+G+G+ VV A C E VAIK++ +K + +E+Q M HPNIV
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 71
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
+ F + + I + + ++ L Y
Sbjct: 72 SYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEY 131
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV------------------------SYICSRYYRAP 234
+H G HRD+K N+L+ + +V +++ + + AP
Sbjct: 132 LHKN-GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAP 190
Query: 235 ELIFGATEYTTAIDIWSTGCVMAELLLG 262
E++ Y DIWS G EL G
Sbjct: 191 EVMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 83/215 (38%), Gaps = 39/215 (18%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDK--------RYKNRELQIMQMLDHPNIVAL 140
++G G V A+ VA+K + D R++ RE Q L+HP IVA+
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR-REAQNAAALNHPAIVAV 77
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKL--YTYQICRALAY 198
+ T T+ I +H P+ + C+AL +
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDI------VHTEGPMTPKRAIEVIADACQALNF 131
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNVSYICSRYYRA----------PELIFGATEYTTA-- 246
H GI HRD+KP N+L+ V + RA + G +Y +
Sbjct: 132 SHQN-GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQ 190
Query: 247 ---------IDIWSTGCVMAELLLGQPLFPGESGV 272
D++S GCV+ E+L G+P F G+S V
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 109/301 (36%), Gaps = 67/301 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-----------RELQIMQMLDHPNIV 138
+G+G F +V + + + TG+ A K ++ +R + RE+ I++ + HPNI+
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYA-AKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 71
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
L F + TD + +A S + QI + Y
Sbjct: 72 TLHDIFENKTD---VVLILELVSGGELFDFLAEKESLTEDE-----ATQFLKQILDGVHY 123
Query: 199 IHNCIGICHRDIKPQN--LLVKGEPN-----VSY-ICSRYYRAPEL--IFGATEYTT--- 245
+H+ I H D+KP+N LL K PN + + I + E IFG E+
Sbjct: 124 LHSK-RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEI 182
Query: 246 --------AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 297
D+WS G + LL G F GE+ + L I +N ++
Sbjct: 183 VNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLT------------NISAVNYDF 230
Query: 298 TEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNT 357
E F A D + R P R T ++ H + +R N
Sbjct: 231 DEEYFSNTSEL-------------AKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNV 277
Query: 358 R 358
R
Sbjct: 278 R 278
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 45/252 (17%)
Query: 76 GNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV-LQDKRYKN---RELQIMQM 131
G+ K+K Y +G G+ G V+ A TG+ VAI+++ LQ + K E+ +M+
Sbjct: 16 GDPKKK--YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73
Query: 132 LDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQ 191
+PNIV + + V + +I
Sbjct: 74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA------------- 120
Query: 192 ICR----ALAYIHNCIGICHRDIKPQNLLVKGEPNV-------------------SYICS 228
+CR AL ++H+ + HRDIK N+L+ + +V + + +
Sbjct: 121 VCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGT 179
Query: 229 RYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 288
Y+ APE++ Y +DIWS G + E++ G+P + E+ + L +I GTP +
Sbjct: 180 PYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQ 237
Query: 289 EIKCMNPNYTEF 300
+ ++ + +F
Sbjct: 238 NPEKLSAIFRDF 249
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 106/252 (42%), Gaps = 45/252 (17%)
Query: 76 GNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV-LQDKRYKN---RELQIMQM 131
G+ K+K Y +G G+ G V+ A TG+ VAI+++ LQ + K E+ +M+
Sbjct: 16 GDPKKK--YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73
Query: 132 LDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQ 191
+PNIV + + V + +I
Sbjct: 74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA------------- 120
Query: 192 ICR----ALAYIHNCIGICHRDIKPQNLLVKGEPNVSY----ICSR-------------- 229
+CR AL ++H+ + HRDIK N+L+ + +V C++
Sbjct: 121 VCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGT 179
Query: 230 -YYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 288
Y+ APE++ Y +DIWS G + E++ G+P + E+ + L +I GTP +
Sbjct: 180 PYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQ 237
Query: 289 EIKCMNPNYTEF 300
+ ++ + +F
Sbjct: 238 NPEKLSAIFRDF 249
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 106/252 (42%), Gaps = 45/252 (17%)
Query: 76 GNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV-LQDKRYKN---RELQIMQM 131
G+ K+K Y +G G+ G V+ A TG+ VAI+++ LQ + K E+ +M+
Sbjct: 16 GDPKKK--YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73
Query: 132 LDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQ 191
+PNIV + + V + +I
Sbjct: 74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA------------- 120
Query: 192 ICR----ALAYIHNCIGICHRDIKPQNLLVKGEPNVSY----ICSR-------------- 229
+CR AL ++H+ + HRDIK N+L+ + +V C++
Sbjct: 121 VCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGT 179
Query: 230 -YYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 288
Y+ APE++ Y +DIWS G + E++ G+P + E+ + L +I GTP +
Sbjct: 180 PYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQ 237
Query: 289 EIKCMNPNYTEF 300
+ ++ + +F
Sbjct: 238 NPEKLSAIFRDF 249
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 106/252 (42%), Gaps = 45/252 (17%)
Query: 76 GNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV-LQDKRYKN---RELQIMQM 131
G+ K+K Y +G G+ G V+ A TG+ VAI+++ LQ + K E+ +M+
Sbjct: 17 GDPKKK--YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 74
Query: 132 LDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQ 191
+PNIV + + V + +I
Sbjct: 75 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA------------- 121
Query: 192 ICR----ALAYIHNCIGICHRDIKPQNLLVKGEPNVSY----ICSR-------------- 229
+CR AL ++H+ + HRDIK N+L+ + +V C++
Sbjct: 122 VCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGT 180
Query: 230 -YYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 288
Y+ APE++ Y +DIWS G + E++ G+P + E+ + L +I GTP +
Sbjct: 181 PYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQ 238
Query: 289 EIKCMNPNYTEF 300
+ ++ + +F
Sbjct: 239 NPEKLSAIFRDF 250
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 85/216 (39%), Gaps = 41/216 (18%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDK--------RYKNRELQIMQMLDHPNIVAL 140
++G G V A+ VA+K + D R++ RE Q L+HP IVA+
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR-REAQNAAALNHPAIVAV 77
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKL--YTYQICRALAY 198
+ T T+ I +H P+ + C+AL +
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDI------VHTEGPMTPKRAIEVIADACQALNF 131
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV----------------------SYICSRYYRAPEL 236
H GI HRD+KP N+++ V + I + Y +PE
Sbjct: 132 SHQN-GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 237 IFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGV 272
G + + D++S GCV+ E+L G+P F G+S V
Sbjct: 191 ARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 37/220 (16%)
Query: 77 NSKQKVSYIAEHVVGTGSFGVVFQAKCRETG-----EIVAIKKV-LQDKRYKNRELQIMQ 130
++K +Y + +G G+F VV + + TG +I+ KK+ +D + RE +I +
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60
Query: 131 MLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTY 190
L HPNIV L + + +AR + I
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI--VAREFYSEADASHCI------Q 112
Query: 191 QICRALAYIHNCIGICHRDIKPQNLLV----KG------------EPNVSYICSRY---- 230
QI ++AY H+ GI HR++KP+NLL+ KG E N S +
Sbjct: 113 QILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP 171
Query: 231 -YRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGE 269
Y +PE + Y+ +DIW+ G ++ LL+G P F E
Sbjct: 172 GYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 210
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 84/214 (39%), Gaps = 41/214 (19%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDK--------RYKNRELQIMQMLDHPNIVAL 140
++G G V A+ VA+K + D R++ RE Q L+HP IVA+
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR-REAQNAAALNHPAIVAV 77
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKL--YTYQICRALAY 198
+ T T+ I +H P+ + C+AL +
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDI------VHTEGPMTPKRAIEVIADACQALNF 131
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV----------------------SYICSRYYRAPEL 236
H GI HRD+KP N+++ V + I + Y +PE
Sbjct: 132 SHQN-GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 237 IFGATEYTTAIDIWSTGCVMAELLLGQPLFPGES 270
G + + D++S GCV+ E+L G+P F G+S
Sbjct: 191 ARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 37/220 (16%)
Query: 77 NSKQKVSYIAEHVVGTGSFGVVFQAKCRETG-----EIVAIKKV-LQDKRYKNRELQIMQ 130
++K +Y + +G G+F VV + + TG +I+ KK+ +D + RE +I +
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60
Query: 131 MLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTY 190
L HPNIV L + + +AR + I
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI--VAREFYSEADASHCI------Q 112
Query: 191 QICRALAYIHNCIGICHRDIKPQNLLV----KG------------EPNVSYICSRY---- 230
QI ++AY H+ GI HR++KP+NLL+ KG E N S +
Sbjct: 113 QILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP 171
Query: 231 -YRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGE 269
Y +PE + Y+ +DIW+ G ++ LL+G P F E
Sbjct: 172 GYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 210
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 98/245 (40%), Gaps = 55/245 (22%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPNIVALKHCFF 145
V+G G+FG V +A+ AIKK+ + + E+ ++ L+H +V +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 146 ---------STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
+ K T+ + + + QR Y +L+ QI AL
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDE--YWRLFR-QILEAL 129
Query: 197 AYIHNCIGICHRDIKPQNLLVKGEPNV--------------------------------- 223
+YIH+ GI HRD+KP N+ + NV
Sbjct: 130 SYIHSQ-GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 224 SYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLG 283
S I + Y A E++ G Y ID++S G + E+ ++P +G+++ V I+K L
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM-----IYPFSTGMER-VNILKKLR 242
Query: 284 TPTRE 288
+ + E
Sbjct: 243 SVSIE 247
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 86/216 (39%), Gaps = 32/216 (14%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV------LQDKRYKNRELQIMQMLDHPNI 137
Y + +GTGS+G + + + G+I+ K++ +K+ E+ +++ L HPNI
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 67
Query: 138 VALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
V T+ + + ++ Q + +V Q+ AL
Sbjct: 68 VRYYDRIIDRTN--TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 198 YIH----NCIGICHRDIKPQNLLVKGEPNV-------------------SYICSRYYRAP 234
H + HRD+KP N+ + G+ NV +++ + YY +P
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSP 185
Query: 235 ELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGES 270
E + Y DIWS GC++ EL P F S
Sbjct: 186 EQM-NRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 220
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 75/193 (38%), Gaps = 50/193 (25%)
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVKGEPNVS--YIC---------------------- 227
+ AL ++H GI HRD+KP+N+L + VS IC
Sbjct: 120 VAAALDFLHT-KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPEL 178
Query: 228 -----SRYYRAPELIF----GATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVD---QL 275
S Y APE++ AT Y D+WS G V+ +L G P F G G D
Sbjct: 179 TTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDR 238
Query: 276 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPN 335
E+ +V E I+ +++FP W + EA DL+ +
Sbjct: 239 GEVCRVCQNKLFESIQ-----EGKYEFPD---KDW-----AHISSEAKDLISKLLVRDAK 285
Query: 336 LRCTALEACVHPF 348
R +A + HP+
Sbjct: 286 QRLSAAQVLQHPW 298
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 85/216 (39%), Gaps = 41/216 (18%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDK--------RYKNRELQIMQMLDHPNIVAL 140
++G G V A+ VA+K + D R++ RE Q L+HP IVA+
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR-REAQNAAALNHPAIVAV 77
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKL--YTYQICRALAY 198
+ T T+ I +H P+ + C+AL +
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDI------VHTEGPMTPKRAIEVIADACQALNF 131
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV----------------------SYICSRYYRAPEL 236
H GI HRD+KP N+++ V + I + Y +PE
Sbjct: 132 SHQN-GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 237 IFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGV 272
G + + D++S GCV+ E+L G+P F G+S V
Sbjct: 191 ARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 86/216 (39%), Gaps = 32/216 (14%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV------LQDKRYKNRELQIMQMLDHPNI 137
Y + +GTGS+G + + + G+I+ K++ +K+ E+ +++ L HPNI
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 67
Query: 138 VALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
V T+ + + ++ Q + +V Q+ AL
Sbjct: 68 VRYYDRIIDRTN--TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 198 YIH----NCIGICHRDIKPQNLLVKGEPNV-------------------SYICSRYYRAP 234
H + HRD+KP N+ + G+ NV +++ + YY +P
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSP 185
Query: 235 ELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGES 270
E + Y DIWS GC++ EL P F S
Sbjct: 186 EQM-NRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 220
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 98/245 (40%), Gaps = 55/245 (22%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPNIVALKHCFF 145
V+G G+FG V +A+ AIKK+ + + E+ ++ L+H +V +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 146 ---------STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
+ K T+ + + + QR Y +L+ QI AL
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE--YWRLFR-QILEAL 129
Query: 197 AYIHNCIGICHRDIKPQNLLVKGEPNV--------------------------------- 223
+YIH+ GI HRD+KP N+ + NV
Sbjct: 130 SYIHSQ-GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 224 SYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLG 283
S I + Y A E++ G Y ID++S G + E+ ++P +G+++ V I+K L
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM-----IYPFSTGMER-VNILKKLR 242
Query: 284 TPTRE 288
+ + E
Sbjct: 243 SVSIE 247
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 91/214 (42%), Gaps = 37/214 (17%)
Query: 83 SYIAEHVVGTGSFGVVFQAKCRETG-----EIVAIKKV-LQDKRYKNRELQIMQMLDHPN 136
+Y + +G G+F VV + + TG +I+ KK+ +D + RE +I + L HPN
Sbjct: 6 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 65
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
IV L + + +AR + I QI ++
Sbjct: 66 IVRLHDSIQEESFHYLVFDLVTGGELFEDI--VAREFYSEADASHCI------QQILESI 117
Query: 197 AYIHNCIGICHRDIKPQNLLV----KG------------EPNVSYICSRY-----YRAPE 235
AY H+ GI HR++KP+NLL+ KG E N S + Y +PE
Sbjct: 118 AYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPE 176
Query: 236 LIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGE 269
+ Y+ +DIW+ G ++ LL+G P F E
Sbjct: 177 -VLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 209
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 85/216 (39%), Gaps = 41/216 (18%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDK--------RYKNRELQIMQMLDHPNIVAL 140
++G G V A+ VA+K + D R++ RE Q L+HP IVA+
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR-REAQNAAALNHPAIVAV 77
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKL--YTYQICRALAY 198
+ T T+ I +H P+ + C+AL +
Sbjct: 78 YATGEAETPAGPLPYIVMEYVDGVTLRDI------VHTEGPMTPKRAIEVIADACQALNF 131
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV----------------------SYICSRYYRAPEL 236
H GI HRD+KP N+++ V + I + Y +PE
Sbjct: 132 SHQN-GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 237 IFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGV 272
G + + D++S GCV+ E+L G+P F G+S V
Sbjct: 191 ARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 39/164 (23%)
Query: 188 YTYQICRALAYIHN--CIGICHRDIKPQNLLVKGEPNVSYICS-----------RYYR-- 232
Y++Q+ R + ++ + CI HRD+ +N+L+ E NV IC Y R
Sbjct: 204 YSFQVARGMEFLSSRKCI---HRDLAARNILL-SENNVVKICDFGLARDIYKNPDYVRKG 259
Query: 233 ---------APELIFGATEYTTAIDIWSTGCVMAELL-LGQPLFPGESGVDQLVEIIKVL 282
APE IF Y+T D+WS G ++ E+ LG +PG V++ +
Sbjct: 260 DTRLPLKWMAPESIFDKI-YSTKSDVWSYGVLLWEIFSLGGSPYPG-------VQMDEDF 311
Query: 283 GTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLV 326
+ RE ++ P Y+ + QI WH+ ++R P +LV
Sbjct: 312 CSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKER--PRFAELV 353
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 85/217 (39%), Gaps = 32/217 (14%)
Query: 83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV------LQDKRYKNRELQIMQMLDHPN 136
Y + +GTGS+G + + + G+I+ K++ +K+ E+ +++ L HPN
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
IV T+ + + ++ Q + +V Q+ AL
Sbjct: 67 IVRYYDRIIDRTN--TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 197 AYIH----NCIGICHRDIKPQNLLVKGEPNV-------------------SYICSRYYRA 233
H + HRD+KP N+ + G+ NV ++ + YY +
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMS 184
Query: 234 PELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGES 270
PE + Y DIWS GC++ EL P F S
Sbjct: 185 PEQM-NRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 220
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 85/216 (39%), Gaps = 41/216 (18%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDK--------RYKNRELQIMQMLDHPNIVAL 140
++G G V A+ VA+K + D R++ RE Q L+HP IVA+
Sbjct: 36 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR-REAQNAAALNHPAIVAV 94
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKL--YTYQICRALAY 198
+ T T+ I +H P+ + C+AL +
Sbjct: 95 YDTGEAETPAGPLPYIVMEYVDGVTLRDI------VHTEGPMTPKRAIEVIADACQALNF 148
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV----------------------SYICSRYYRAPEL 236
H GI HRD+KP N+++ V + I + Y +PE
Sbjct: 149 SHQN-GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 207
Query: 237 IFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGV 272
G + + D++S GCV+ E+L G+P F G+S V
Sbjct: 208 ARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 242
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 24/106 (22%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLVKGEPNVS--------------------YIC 227
+T QI + + H+ + I HRDIKPQN+L+ + +
Sbjct: 116 FTNQILDGIKHAHD-MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLG 174
Query: 228 SRYYRAPELIFG-ATEYTTAIDIWSTGCVMAELLLGQPLFPGESGV 272
+ Y +PE G AT+ T DI+S G V+ E+L+G+P F GE+ V
Sbjct: 175 TVQYFSPEQAKGEATDECT--DIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 40/219 (18%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
V+G GSFG V ++ + T E+ A+K + +D ++ +++ ++ + P +
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ--RMPLIYVKLYTYQICRALAYI 199
H F T D+ VN Y I Q R + Y +I L ++
Sbjct: 87 HSCFQTMDRLYFVMEY--------VNGGDLMY-HIQQVGRFKEPHAVFYAAEIAIGLFFL 137
Query: 200 HNCIGICHRDIKPQNLLVKGEPNVS-------------------YICSRYYRAPELIFGA 240
+ GI +RD+K N+++ E ++ + + Y APE+I
Sbjct: 138 QSK-GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEII-AY 195
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEII 279
Y ++D W+ G ++ E+L GQ F GE D+L + I
Sbjct: 196 QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-DELFQSI 233
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 40/219 (18%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
V+G GSFG V ++ + T E+ A+K + +D ++ +++ ++ + P +
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ--RMPLIYVKLYTYQICRALAYI 199
H F T D+ VN Y I Q R + Y +I L ++
Sbjct: 408 HSCFQTMDRLYFVMEY--------VNGGDLMY-HIQQVGRFKEPHAVFYAAEIAIGLFFL 458
Query: 200 HNCIGICHRDIKPQNLLVKGEPNVS-------------------YICSRYYRAPELIFGA 240
+ GI +RD+K N+++ E ++ + + Y APE+I
Sbjct: 459 QS-KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEII-AY 516
Query: 241 TEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEII 279
Y ++D W+ G ++ E+L GQ F GE D+L + I
Sbjct: 517 QPYGKSVDWWAFGVLLYEMLAGQAPFEGED-EDELFQSI 554
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 106/252 (42%), Gaps = 45/252 (17%)
Query: 76 GNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV-LQDKRYKN---RELQIMQM 131
G+ K+K Y +G G+ G V+ A TG+ VAI+++ LQ + K E+ +M+
Sbjct: 17 GDPKKK--YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 74
Query: 132 LDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQ 191
+PNIV + + V + +I
Sbjct: 75 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA------------- 121
Query: 192 ICR----ALAYIHNCIGICHRDIKPQNLLVKGEPNV-------------------SYICS 228
+CR AL ++H+ + HR+IK N+L+ + +V + + +
Sbjct: 122 VCRECLQALEFLHSN-QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGT 180
Query: 229 RYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 288
Y+ APE++ Y +DIWS G + E++ G+P + E+ + L +I GTP +
Sbjct: 181 PYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQ 238
Query: 289 EIKCMNPNYTEF 300
+ ++ + +F
Sbjct: 239 NPEKLSAIFRDF 250
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 108/301 (35%), Gaps = 67/301 (22%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-----------RELQIMQMLDHPNIV 138
+G+G F +V + + + TG+ A K ++ +R + RE+ I++ + HPNI+
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYA-AKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNII 92
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
L F + TD + +A S + QI + Y
Sbjct: 93 TLHDIFENKTD---VVLILELVSGGELFDFLAEKESLTEDE-----ATQFLKQILDGVHY 144
Query: 199 IHNCIGICHRDIKPQN--LLVKGEPN-----VSY-ICSRYYRAPEL--IFGATEYTT--- 245
+H+ I H D+KP+N LL K PN + + I + E IFG E+
Sbjct: 145 LHSK-RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEI 203
Query: 246 --------AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 297
D+WS G + LL G F GE+ + L I +N ++
Sbjct: 204 VNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLT------------NISAVNYDF 251
Query: 298 TEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNT 357
E F A D + R P R ++ H + +R N
Sbjct: 252 DEEYFSNTSEL-------------AKDFIRRLLVKDPKRRMXIAQSLEHSWIKAIRRRNV 298
Query: 358 R 358
R
Sbjct: 299 R 299
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 83/219 (37%), Gaps = 46/219 (21%)
Query: 174 SRIHQRMPL--IYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGEPNVS--YIC-- 227
S IH+R + + + AL ++HN GI HRD+KP+N+L + VS IC
Sbjct: 100 SHIHKRRHFNELEASVVVQDVASALDFLHN-KGIAHRDLKPENILCEHPNQVSPVKICDF 158
Query: 228 -------------------------SRYYRAPELIFGATE----YTTAIDIWSTGCVMAE 258
S Y APE++ +E Y D+WS G ++
Sbjct: 159 DLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYI 218
Query: 259 LLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRL 318
LL G P F G G D + + P + + + +++FP W +
Sbjct: 219 LLSGYPPFVGRCGSDCGWD--RGEACPACQNMLFESIQEGKYEFPD---KDW-----AHI 268
Query: 319 PPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNT 357
A DL+ + R +A + HP+ NT
Sbjct: 269 SCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENT 307
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 89/209 (42%), Gaps = 32/209 (15%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNR--ELQIMQMLDHPN 136
++ V+G G FG VF + + TG++ A KK+ + + Y+ E +I+ +
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
IV+L + F + TD + + + + + YT QI L
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI----FYTAQIVSGL 302
Query: 197 AYIHNCIGICHRDIKPQNLLVKGEPNV-------------------SYICSRYYRAPELI 237
++H I +RD+KP+N+L+ + NV Y + + APEL+
Sbjct: 303 EHLHQ-RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 238 FGATEYTTAIDIWSTGCVMAELLLGQPLF 266
G EY ++D ++ G + E++ + F
Sbjct: 362 LG-EEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 89/209 (42%), Gaps = 32/209 (15%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNR--ELQIMQMLDHPN 136
++ V+G G FG VF + + TG++ A KK+ + + Y+ E +I+ +
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
IV+L + F + TD + + + + + YT QI L
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI----FYTAQIVSGL 302
Query: 197 AYIHNCIGICHRDIKPQNLLVKGEPNV-------------------SYICSRYYRAPELI 237
++H I +RD+KP+N+L+ + NV Y + + APEL+
Sbjct: 303 EHLHQ-RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 238 FGATEYTTAIDIWSTGCVMAELLLGQPLF 266
G EY ++D ++ G + E++ + F
Sbjct: 362 LG-EEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 78/201 (38%), Gaps = 39/201 (19%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV-----LQDKRYKNRELQIMQMLDHPNIVALKHCF 144
+G GSFG V++ T E+VAIK + + +E+ ++ D P I +
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPL--IYVKLYTYQICRALAYIHNC 202
+T + + PL Y+ +I + L Y+H+
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLL-----------KPGPLEETYIATILREILKGLDYLHSE 135
Query: 203 IGICHRDIKPQNLLVKGEPNVS-------------------YICSRYYRAPELIFGATEY 243
I HRDIK N+L+ + +V ++ + ++ APE+I + Y
Sbjct: 136 RKI-HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSAY 193
Query: 244 TTAIDIWSTGCVMAELLLGQP 264
DIWS G EL G+P
Sbjct: 194 DFKADIWSLGITAIELAKGEP 214
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 89/209 (42%), Gaps = 32/209 (15%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNR--ELQIMQMLDHPN 136
++ V+G G FG VF + + TG++ A KK+ + + Y+ E +I+ +
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
IV+L + F + TD + + + + + YT QI L
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI----FYTAQIVSGL 302
Query: 197 AYIHNCIGICHRDIKPQNLLVKGEPNV-------------------SYICSRYYRAPELI 237
++H I +RD+KP+N+L+ + NV Y + + APEL+
Sbjct: 303 EHLHQ-RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 238 FGATEYTTAIDIWSTGCVMAELLLGQPLF 266
G EY ++D ++ G + E++ + F
Sbjct: 362 LG-EEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 83/219 (37%), Gaps = 46/219 (21%)
Query: 174 SRIHQRMPL--IYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGEPNVS--YIC-- 227
S IH+R + + + AL ++HN GI HRD+KP+N+L + VS IC
Sbjct: 100 SHIHKRRHFNELEASVVVQDVASALDFLHN-KGIAHRDLKPENILCEHPNQVSPVKICDF 158
Query: 228 -------------------------SRYYRAPELIFGATE----YTTAIDIWSTGCVMAE 258
S Y APE++ +E Y D+WS G ++
Sbjct: 159 GLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYI 218
Query: 259 LLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRL 318
LL G P F G G D + + P + + + +++FP W +
Sbjct: 219 LLSGYPPFVGRCGSDCGWD--RGEACPACQNMLFESIQEGKYEFPD---KDW-----AHI 268
Query: 319 PPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNT 357
A DL+ + R +A + HP+ NT
Sbjct: 269 SCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENT 307
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 89/209 (42%), Gaps = 32/209 (15%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNR--ELQIMQMLDHPN 136
++ V+G G FG VF + + TG++ A KK+ + + Y+ E +I+ +
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
IV+L + F + TD + + + + + YT QI L
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI----FYTAQIVSGL 302
Query: 197 AYIHNCIGICHRDIKPQNLLVKGEPNV-------------------SYICSRYYRAPELI 237
++H I +RD+KP+N+L+ + NV Y + + APEL+
Sbjct: 303 EHLHQ-RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 238 FGATEYTTAIDIWSTGCVMAELLLGQPLF 266
G EY ++D ++ G + E++ + F
Sbjct: 362 LG-EEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 83/214 (38%), Gaps = 46/214 (21%)
Query: 180 MPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGEPNVS--------YICSRYY 231
+P+ +K + + +YIHN ICHRD+KP N+L+ V Y+ +
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKI 207
Query: 232 RA---------PELIFGATEYTTA-IDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV 281
+ PE + Y A +DIWS G + + F + LVE+
Sbjct: 208 KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS---LVELFNN 264
Query: 282 LGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKR-------LPPEAVDLVCRFFQYSP 334
+ T E +P + H + + K+ L E +D + F + +P
Sbjct: 265 IRTKNIE-------------YPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNP 311
Query: 335 NLRCTALEACVHPFF-----DELRDPNTRLPNGR 363
R T+ +A H + ++LR+ + L R
Sbjct: 312 AERITSEDALKHEWLADTNIEDLREFSKELYKKR 345
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 89/224 (39%), Gaps = 42/224 (18%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-----------RELQIMQMLDHPNIV 138
+G+G F +V + + + TG+ A K ++ +R + RE+ I++ + HPNI+
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYA-AKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 78
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
L F + TD + +A S + QI + Y
Sbjct: 79 TLHDIFENKTD---VVLILELVSGGELFDFLAEKESLTEDE-----ATQFLKQILDGVHY 130
Query: 199 IHNCIGICHRDIKPQN--LLVKGEPN-----VSY-ICSRYYRAPEL--IFGATEYTT--- 245
+H+ I H D+KP+N LL K PN + + I + E IFG E+
Sbjct: 131 LHSK-RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEI 189
Query: 246 --------AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV 281
D+WS G + LL G F GE+ + L I V
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV 233
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 55/219 (25%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNREL---------QIMQMLDHPNIVAL 140
+G G FGVVF+AK + AIK++ R NREL + + L+HP IV
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRI----RLPNRELAREKVMREVKALAKLEHPGIVRY 68
Query: 141 KHCFF--STTDKXXXXXXXXXXXXXXTVNR------IARNYSRIHQRMPLIYVKLYTYQI 192
+ + +TT+K + R I +R + + ++ QI
Sbjct: 69 FNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF-LQI 127
Query: 193 CRALAYIHNCIGICHRDIKPQNLLVKGE-------------------------PNVSY-- 225
A+ ++H+ G+ HRD+KP N+ + P +Y
Sbjct: 128 AEAVEFLHSK-GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYAR 186
Query: 226 ----ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELL 260
+ ++ Y +PE I G + Y+ +DI+S G ++ ELL
Sbjct: 187 HTGQVGTKLYMSPEQIHGNS-YSHKVDIFSLGLILFELL 224
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 24/146 (16%)
Query: 226 ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESG------VDQLVEII 279
I +R YR+ E++ GA Y+T DIWST C+ EL G LF SG D + II
Sbjct: 246 IQTRQYRSIEVLIGAG-YSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHII 304
Query: 280 KVLGTPTREEIKCMNPNYTEFKF---------PQIKPHPWHKVFQKRL------PPEAVD 324
++LG+ R ++ Y+ F ++KP V ++ + D
Sbjct: 305 ELLGSIPRH--FALSGKYSREFFNRRGELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTD 362
Query: 325 LVCRFFQYSPNLRCTALEACVHPFFD 350
+ + P R +A E HP+ +
Sbjct: 363 FLIPMLEMVPEKRASAGECLRHPWLN 388
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 177 HQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLV 217
+Q +P+ VK Q+ + L Y+H+ I H DIKP+N+L+
Sbjct: 134 YQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILM 174
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 126/323 (39%), Gaps = 68/323 (21%)
Query: 81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQMLD 133
K ++ V+G G FG V + R TG++ A KK+ + + K E QI++ ++
Sbjct: 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN 242
Query: 134 HPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQIC 193
+V+L + + + + Y P Y +IC
Sbjct: 243 SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHI------YHMGQAGFPEARAVFYAAEIC 296
Query: 194 RALAYIHNCIGICHRDIKPQNLLV------------------KGEPNVSYICSRYYRAPE 235
L +H I +RD+KP+N+L+ +G+ + + Y APE
Sbjct: 297 CGLEDLHR-ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPE 355
Query: 236 LIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 295
++ YT + D W+ GC++ E++ GQ F Q + IK REE++ +
Sbjct: 356 VV-KNERYTFSPDWWALGCLLYEMIAGQSPF------QQRKKKIK------REEVERL-- 400
Query: 296 NYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRC-----TALEACVHPFFD 350
+K P + + +R P+A L + P R +A E HP F
Sbjct: 401 ---------VKEVP--EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFK 449
Query: 351 ELRDPNTRLPNGRPLPPLFNFKP 373
+L RL G PP FKP
Sbjct: 450 KLN--FKRLGAGMLEPP---FKP 467
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 83/206 (40%), Gaps = 26/206 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRY-KNRELQIMQMLDHPNIVALKHCFFSTT 148
+G GS+G VF+ + +E G + A+K+ + R K+R ++ ++ H + C
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCV--RL 122
Query: 149 DKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGICHR 208
++ + ++ +P V Y ALA++H+ G+ H
Sbjct: 123 EQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHS-QGLVHL 181
Query: 209 DIKPQNLLV-------------------KGEPNVSYICSRYYRAPELIFGATEYTTAIDI 249
D+KP N+ + G V RY APEL+ G+ Y TA D+
Sbjct: 182 DVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYM-APELLQGS--YGTAADV 238
Query: 250 WSTGCVMAELLLGQPLFPGESGVDQL 275
+S G + E+ L G G QL
Sbjct: 239 FSLGLTILEVACNMELPHGGEGWQQL 264
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 111/277 (40%), Gaps = 50/277 (18%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK--------NRELQIMQMLDHP 135
Y+ ++G GS+G V + ET A+K + + K + +E+Q+++ L H
Sbjct: 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHK 66
Query: 136 NIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRA 195
N++ L ++ + + S +R P+ Y Q+
Sbjct: 67 NVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLD-----SVPEKRFPVCQAHGYFCQLIDG 121
Query: 196 LAYIHNCIGICHRDIKPQNLLVK--GEPNVSYI-------------------CSRYYRAP 234
L Y+H+ GI H+DIKP NLL+ G +S + S ++ P
Sbjct: 122 LEYLHS-QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPP 180
Query: 235 ELIFGATEYTT-AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV--------LGTP 285
E+ G ++ +DIWS G + + G F G++ + +L E I G P
Sbjct: 181 EIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN-IYKLFENIGKGSYAIPGDCGPP 239
Query: 286 TREEIKCM--NPNYTEFKFPQIKPHPWHKVFQKRLPP 320
+ +K M F QI+ H W F+K+ PP
Sbjct: 240 LSDLLKGMLEYEPAKRFSIRQIRQHSW---FRKKHPP 273
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 126/323 (39%), Gaps = 68/323 (21%)
Query: 81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQMLD 133
K ++ V+G G FG V + R TG++ A KK+ + + K E QI++ ++
Sbjct: 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN 242
Query: 134 HPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQIC 193
+V+L + + + + Y P Y +IC
Sbjct: 243 SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHI------YHMGQAGFPEARAVFYAAEIC 296
Query: 194 RALAYIHNCIGICHRDIKPQNLLV------------------KGEPNVSYICSRYYRAPE 235
L +H I +RD+KP+N+L+ +G+ + + Y APE
Sbjct: 297 CGLEDLHR-ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPE 355
Query: 236 LIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 295
++ YT + D W+ GC++ E++ GQ F Q + IK REE++ +
Sbjct: 356 VV-KNERYTFSPDWWALGCLLYEMIAGQSPF------QQRKKKIK------REEVERL-- 400
Query: 296 NYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRC-----TALEACVHPFFD 350
+K P + + +R P+A L + P R +A E HP F
Sbjct: 401 ---------VKEVP--EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFK 449
Query: 351 ELRDPNTRLPNGRPLPPLFNFKP 373
+L RL G PP FKP
Sbjct: 450 KLN--FKRLGAGMLEPP---FKP 467
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 80/201 (39%), Gaps = 39/201 (19%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV-----LQDKRYKNRELQIMQMLDHPNIVALKHCF 144
+G GSFG VF+ T ++VAIK + + +E+ ++ D P + +
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTY--QICRALAYIHNC 202
T + + PL ++ T +I + L Y+H+
Sbjct: 90 LKDTKLWIIMEYLGGGSALDLL-----------EPGPLDETQIATILREILKGLDYLHSE 138
Query: 203 IGICHRDIKPQNLLVK--GEPNVS-----------------YICSRYYRAPELIFGATEY 243
I HRDIK N+L+ GE ++ ++ + ++ APE+I + Y
Sbjct: 139 KKI-HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSAY 196
Query: 244 TTAIDIWSTGCVMAELLLGQP 264
+ DIWS G EL G+P
Sbjct: 197 DSKADIWSLGITAIELARGEP 217
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 77/199 (38%), Gaps = 35/199 (17%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV-----LQDKRYKNRELQIMQMLDHPNIVALKHCF 144
+G GSFG VF+ T ++VAIK + + +E+ ++ D P + +
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 94
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
T + + ++I + +I + L Y+H+
Sbjct: 95 LKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATIL---------REILKGLDYLHSEKK 145
Query: 205 ICHRDIKPQNLLVKGEPNV-------------------SYICSRYYRAPELIFGATEYTT 245
I HRDIK N+L+ V +++ + ++ APE+I + Y +
Sbjct: 146 I-HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-KQSAYDS 203
Query: 246 AIDIWSTGCVMAELLLGQP 264
DIWS G EL G+P
Sbjct: 204 KADIWSLGITAIELARGEP 222
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 18/121 (14%)
Query: 178 QRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGEP-------NVSYICSRY 230
Q++P+ Y +I AL+Y+H+ IG+ + D+KP+N+++ E VS I S
Sbjct: 177 QKLPVAEAIAYLLEILPALSYLHS-IGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSFG 235
Query: 231 Y-------RAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLG 283
Y +APE++ T T A DI++ G +A L L P G VD L E VL
Sbjct: 236 YLYGTPGFQAPEIV--RTGPTVATDIYTVGRTLAALTLDLPTRNGRY-VDGLPEDDPVLK 292
Query: 284 T 284
T
Sbjct: 293 T 293
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 77/199 (38%), Gaps = 35/199 (17%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV-----LQDKRYKNRELQIMQMLDHPNIVALKHCF 144
+G GSFG VF+ T ++VAIK + + +E+ ++ D P + +
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
T + + ++I + +I + L Y+H+
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATIL---------REILKGLDYLHSEKK 125
Query: 205 ICHRDIKPQNLLVKGEPNV-------------------SYICSRYYRAPELIFGATEYTT 245
I HRDIK N+L+ V +++ + ++ APE+I + Y +
Sbjct: 126 I-HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-KQSAYDS 183
Query: 246 AIDIWSTGCVMAELLLGQP 264
DIWS G EL G+P
Sbjct: 184 KADIWSLGITAIELARGEP 202
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 80/201 (39%), Gaps = 39/201 (19%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV-----LQDKRYKNRELQIMQMLDHPNIVALKHCF 144
+G GSFG VF+ T ++VAIK + + +E+ ++ D P + +
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTY--QICRALAYIHNC 202
T + + PL ++ T +I + L Y+H+
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLL-----------EPGPLDETQIATILREILKGLDYLHSE 123
Query: 203 IGICHRDIKPQNLLVK--GEPNVS-----------------YICSRYYRAPELIFGATEY 243
I HRDIK N+L+ GE ++ ++ + ++ APE+I + Y
Sbjct: 124 KKI-HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSAY 181
Query: 244 TTAIDIWSTGCVMAELLLGQP 264
+ DIWS G EL G+P
Sbjct: 182 DSKADIWSLGITAIELARGEP 202
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 61/146 (41%), Gaps = 24/146 (16%)
Query: 226 ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESG------VDQLVEII 279
I +R YR+ E++ G+ Y T DIWST C+ EL G LF SG D + II
Sbjct: 254 IQTRQYRSLEVLIGSG-YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALII 312
Query: 280 KVLGTPTREEIKCMNPNYTEFKFPQ-------IKPHPWHKV--------FQKRLPPEAVD 324
++LG R+ I + Y++ F + K PW + + D
Sbjct: 313 ELLGKVPRKLI--VAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTD 370
Query: 325 LVCRFFQYSPNLRCTALEACVHPFFD 350
+ + P R TA E HP+ +
Sbjct: 371 FLLPMLELIPEKRATAAECLRHPWLN 396
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 177 HQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLV 217
+Q +PL VK Q+ + L Y+H I H DIKP+N+L+
Sbjct: 140 YQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILL 180
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 61/146 (41%), Gaps = 24/146 (16%)
Query: 226 ICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESG------VDQLVEII 279
I +R YR+ E++ G+ Y T DIWST C+ EL G LF SG D + II
Sbjct: 238 IQTRQYRSLEVLIGSG-YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALII 296
Query: 280 KVLGTPTREEIKCMNPNYTEFKFPQ-------IKPHPWHKV--------FQKRLPPEAVD 324
++LG R+ I + Y++ F + K PW + + D
Sbjct: 297 ELLGKVPRKLI--VAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTD 354
Query: 325 LVCRFFQYSPNLRCTALEACVHPFFD 350
+ + P R TA E HP+ +
Sbjct: 355 FLLPMLELIPEKRATAAECLRHPWLN 380
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 177 HQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLV 217
+Q +PL VK Q+ + L Y+H I H DIKP+N+L+
Sbjct: 124 YQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILL 164
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 89/226 (39%), Gaps = 46/226 (20%)
Query: 90 VGTGSFGVVFQAKCRE--TGEIVAIKKVLQDKRYKN-----------RELQIMQMLDHPN 136
+G+G F VV KCRE TG A K ++ +R K+ RE+ I++ + HPN
Sbjct: 18 LGSGQFAVV--KKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 74
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
++ L + + TD + +A S + + QI +
Sbjct: 75 VITLHEVYENKTD---VILILELVAGGELFDFLAEKESLTEEE-----ATEFLKQILNGV 126
Query: 197 AYIHNCIGICHRDIKPQNLLVKG----EPNVSYICSRYYRAPEL------IFGATEYTT- 245
Y+H + I H D+KP+N+++ +P + I + IFG E+
Sbjct: 127 YYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 185
Query: 246 ----------AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV 281
D+WS G + LL G F G++ + L + V
Sbjct: 186 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 231
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 89/226 (39%), Gaps = 46/226 (20%)
Query: 90 VGTGSFGVVFQAKCRE--TGEIVAIKKVLQDKRYKN-----------RELQIMQMLDHPN 136
+G+G F VV KCRE TG A K ++ +R K+ RE+ I++ + HPN
Sbjct: 18 LGSGQFAVV--KKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 74
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
++ L + + TD + +A S + + QI +
Sbjct: 75 VITLHEVYENKTD---VILILELVAGGELFDFLAEKESLTEEE-----ATEFLKQILNGV 126
Query: 197 AYIHNCIGICHRDIKPQNLLVKG----EPNVSYICSRYYRAPEL------IFGATEYTT- 245
Y+H + I H D+KP+N+++ +P + I + IFG E+
Sbjct: 127 YYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 185
Query: 246 ----------AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV 281
D+WS G + LL G F G++ + L + V
Sbjct: 186 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 231
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 89/226 (39%), Gaps = 46/226 (20%)
Query: 90 VGTGSFGVVFQAKCRE--TGEIVAIKKVLQDKRYKN-----------RELQIMQMLDHPN 136
+G+G F VV KCRE TG A K ++ +R K+ RE+ I++ + HPN
Sbjct: 19 LGSGKFAVV--KKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
++ L + + TD + +A S + + QI +
Sbjct: 76 VITLHEVYENKTD---VILILELVAGGELFDFLAEKESLTEEE-----ATEFLKQILNGV 127
Query: 197 AYIHNCIGICHRDIKPQNLLVKG----EPNVSYICSRYYRAPEL------IFGATEYTT- 245
Y+H + I H D+KP+N+++ +P + I + IFG E+
Sbjct: 128 YYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 246 ----------AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV 281
D+WS G + LL G F G++ + L + V
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 89/226 (39%), Gaps = 46/226 (20%)
Query: 90 VGTGSFGVVFQAKCRE--TGEIVAIKKVLQDKRYKN-----------RELQIMQMLDHPN 136
+G+G F VV KCRE TG A K ++ +R K+ RE+ I++ + HPN
Sbjct: 19 LGSGQFAVV--KKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
++ L + + TD + +A S + + QI +
Sbjct: 76 VITLHEVYENKTD---VILILELVAGGELFDFLAEKESLTEEE-----ATEFLKQILNGV 127
Query: 197 AYIHNCIGICHRDIKPQNLLVKG----EPNVSYICSRYYRAPEL------IFGATEYTT- 245
Y+H + I H D+KP+N+++ +P + I + IFG E+
Sbjct: 128 YYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 246 ----------AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV 281
D+WS G + LL G F G++ + L + V
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 89/226 (39%), Gaps = 46/226 (20%)
Query: 90 VGTGSFGVVFQAKCRE--TGEIVAIKKVLQDKRYKN-----------RELQIMQMLDHPN 136
+G+G F VV KCRE TG A K ++ +R K+ RE+ I++ + HPN
Sbjct: 19 LGSGQFAVV--KKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
++ L + + TD + +A S + + QI +
Sbjct: 76 VITLHEVYENKTD---VILILELVAGGELFDFLAEKESLTEEE-----ATEFLKQILNGV 127
Query: 197 AYIHNCIGICHRDIKPQNLLVKG----EPNVSYICSRYYRAPEL------IFGATEYTT- 245
Y+H + I H D+KP+N+++ +P + I + IFG E+
Sbjct: 128 YYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 246 ----------AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV 281
D+WS G + LL G F G++ + L + V
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 89/226 (39%), Gaps = 46/226 (20%)
Query: 90 VGTGSFGVVFQAKCRE--TGEIVAIKKVLQDKRYKN-----------RELQIMQMLDHPN 136
+G+G F VV KCRE TG A K ++ +R K+ RE+ I++ + HPN
Sbjct: 19 LGSGQFAVV--KKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
++ L + + TD + +A S + + QI +
Sbjct: 76 VITLHEVYENKTD---VILILELVAGGELFDFLAEKESLTEEE-----ATEFLKQILNGV 127
Query: 197 AYIHNCIGICHRDIKPQNLLVKG----EPNVSYICSRYYRAPEL------IFGATEYTT- 245
Y+H + I H D+KP+N+++ +P + I + IFG E+
Sbjct: 128 YYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 246 ----------AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV 281
D+WS G + LL G F G++ + L + V
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 134/343 (39%), Gaps = 71/343 (20%)
Query: 89 VVGTG--SFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVAL 140
V+G G V A+ + TGE V ++++ + + EL + ++ +HPNIV
Sbjct: 16 VIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPY 75
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
+ F + + + I ++ + + Y+ + +AL YIH
Sbjct: 76 RATFIADNELWVVTSFMAYGSAK---DLICTHFMDGMNELAIAYI---LQGVLKALDYIH 129
Query: 201 NCIGICHRDIKPQNLLVKGE---------PNVSYICS-----------RY------YRAP 234
+ +G HR +K ++L+ + N+S I +Y + +P
Sbjct: 130 H-MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSP 188
Query: 235 ELIFGATE-YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIK-----VLGTPT-- 286
E++ + Y DI+S G EL G F L+E + +L T T
Sbjct: 189 EVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIP 248
Query: 287 REEIKCMNPNYT--------EFKFPQIKP-------HPWHKVFQKRLPPEAVDLVCRFFQ 331
EE+ M+P+ + +P HP+H+ F P V + Q
Sbjct: 249 AEEL-TMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFS----PHFHHFVEQCLQ 303
Query: 332 YSPNLRCTALEACVHPFFDEL-RDPNTRLPN-GRPLPPLFNFK 372
+P+ R +A H FF ++ R + LP RP+ P+ NF+
Sbjct: 304 RNPDARPSASTLLNHSFFKQIKRRASEALPELLRPVTPITNFE 346
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 89/226 (39%), Gaps = 46/226 (20%)
Query: 90 VGTGSFGVVFQAKCRE--TGEIVAIKKVLQDKRYKN-----------RELQIMQMLDHPN 136
+G+G F VV KCRE TG A K ++ +R K+ RE+ I++ + HPN
Sbjct: 19 LGSGQFAVV--KKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
++ L + + TD + +A S + + QI +
Sbjct: 76 VITLHEVYENKTD---VILIGELVAGGELFDFLAEKESLTEEE-----ATEFLKQILNGV 127
Query: 197 AYIHNCIGICHRDIKPQNLLVKG----EPNVSYICSRYYRAPEL------IFGATEYTT- 245
Y+H + I H D+KP+N+++ +P + I + IFG E+
Sbjct: 128 YYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 246 ----------AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV 281
D+WS G + LL G F G++ + L + V
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 89/226 (39%), Gaps = 46/226 (20%)
Query: 90 VGTGSFGVVFQAKCRE--TGEIVAIKKVLQDKRYKN-----------RELQIMQMLDHPN 136
+G+G F VV KCRE TG A K ++ +R K+ RE+ I++ + HPN
Sbjct: 19 LGSGQFAVV--KKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
++ L + + TD + +A S + + QI +
Sbjct: 76 VITLHEVYENKTD---VILILELVAGGELFDFLAEKESLTEEE-----ATEFLKQILNGV 127
Query: 197 AYIHNCIGICHRDIKPQNLLVKG----EPNVSYICSRYYRAPEL------IFGATEYTT- 245
Y+H + I H D+KP+N+++ +P + I + IFG E+
Sbjct: 128 YYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 246 ----------AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV 281
D+WS G + LL G F G++ + L + V
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 89/226 (39%), Gaps = 46/226 (20%)
Query: 90 VGTGSFGVVFQAKCRE--TGEIVAIKKVLQDKRYKN-----------RELQIMQMLDHPN 136
+G+G F VV KCRE TG A K ++ +R K+ RE+ I++ + HPN
Sbjct: 19 LGSGQFAVV--KKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
++ L + + TD + +A S + + QI +
Sbjct: 76 VITLHEVYENKTD---VILILELVAGGELFDFLAEKESLTEEE-----ATEFLKQILNGV 127
Query: 197 AYIHNCIGICHRDIKPQNLLVKG----EPNVSYICSRYYRAPEL------IFGATEYTT- 245
Y+H + I H D+KP+N+++ +P + I + IFG E+
Sbjct: 128 YYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 246 ----------AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV 281
D+WS G + LL G F G++ + L + V
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 134/343 (39%), Gaps = 71/343 (20%)
Query: 89 VVGTG--SFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVAL 140
V+G G V A+ + TGE V ++++ + + EL + ++ +HPNIV
Sbjct: 32 VIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPY 91
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
+ F + + + I ++ + + Y+ + +AL YIH
Sbjct: 92 RATFIADNE---LWVVTSFMAYGSAKDLICTHFMDGMNELAIAYI---LQGVLKALDYIH 145
Query: 201 NCIGICHRDIKPQNLLVKGE---------PNVSYICS-----------RY------YRAP 234
+ +G HR +K ++L+ + N+S I +Y + +P
Sbjct: 146 H-MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSP 204
Query: 235 ELIFGATE-YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIK-----VLGTPT-- 286
E++ + Y DI+S G EL G F L+E + +L T T
Sbjct: 205 EVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIP 264
Query: 287 REEIKCMNPNYT--------EFKFPQIKP-------HPWHKVFQKRLPPEAVDLVCRFFQ 331
EE+ M+P+ + +P HP+H+ F P V + Q
Sbjct: 265 AEEL-TMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFS----PHFHHFVEQCLQ 319
Query: 332 YSPNLRCTALEACVHPFFDEL-RDPNTRLPN-GRPLPPLFNFK 372
+P+ R +A H FF ++ R + LP RP+ P+ NF+
Sbjct: 320 RNPDARPSASTLLNHSFFKQIKRRASEALPELLRPVTPITNFE 362
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 49/217 (22%)
Query: 79 KQKVSYIAEHVVGTGSFGVVFQAKCR------ETGEIVAIKKVLQD----KRYKNRELQI 128
++ + YI++ +G G+FG V CR TG +VA+K++ +R RE+QI
Sbjct: 9 ERHLKYISQ--LGKGNFGSV--ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 64
Query: 129 MQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKL 187
++ L IV + + + + R++ + H+ R+ + L
Sbjct: 65 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLP------SGCLRDFLQRHRARLDASRLLL 118
Query: 188 YTYQICRALAYIHN--CIGICHRDIKPQNLLVKGEPNV---------------SYICSR- 229
Y+ QIC+ + Y+ + C+ HRD+ +N+LV+ E +V Y R
Sbjct: 119 YSSQICKGMEYLGSRRCV---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVRE 175
Query: 230 ------YYRAPELIFGATEYTTAIDIWSTGCVMAELL 260
++ APE + ++ D+WS G V+ EL
Sbjct: 176 PGQSPIFWYAPESL-SDNIFSRQSDVWSFGVVLYELF 211
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 89/226 (39%), Gaps = 46/226 (20%)
Query: 90 VGTGSFGVVFQAKCRE--TGEIVAIKKVLQDKRYKN-----------RELQIMQMLDHPN 136
+G+G F VV KCRE TG A K ++ +R K+ RE+ I++ + HPN
Sbjct: 19 LGSGQFAVV--KKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
++ L + + TD + +A S + + QI +
Sbjct: 76 VITLHEVYENKTD---VILILELVAGGELFDFLAEKESLTEEE-----ATEFLKQILNGV 127
Query: 197 AYIHNCIGICHRDIKPQNLLVKG----EPNVSYICSRYYRAPEL------IFGATEYTT- 245
Y+H + I H D+KP+N+++ +P + I + IFG E+
Sbjct: 128 YYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 246 ----------AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV 281
D+WS G + LL G F G++ + L + V
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 89/226 (39%), Gaps = 46/226 (20%)
Query: 90 VGTGSFGVVFQAKCRE--TGEIVAIKKVLQDKRYKN-----------RELQIMQMLDHPN 136
+G+G F VV KCRE TG A K ++ +R K+ RE+ I++ + HPN
Sbjct: 19 LGSGQFAVV--KKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
++ L + + TD + +A S + + QI +
Sbjct: 76 VITLHEVYENKTD---VILILELVAGGELFDFLAEKESLTEEE-----ATEFLKQILNGV 127
Query: 197 AYIHNCIGICHRDIKPQNLLVKG----EPNVSYICSRYYRAPEL------IFGATEYTT- 245
Y+H + I H D+KP+N+++ +P + I + IFG E+
Sbjct: 128 YYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 246 ----------AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV 281
D+WS G + LL G F G++ + L + V
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 49/217 (22%)
Query: 79 KQKVSYIAEHVVGTGSFGVVFQAKCR------ETGEIVAIKKVLQD----KRYKNRELQI 128
++ + YI++ +G G+FG V CR TG +VA+K++ +R RE+QI
Sbjct: 10 ERHLKYISQ--LGKGNFGSV--ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 65
Query: 129 MQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKL 187
++ L IV + + + + R++ + H+ R+ + L
Sbjct: 66 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLP------SGCLRDFLQRHRARLDASRLLL 119
Query: 188 YTYQICRALAYIHN--CIGICHRDIKPQNLLVKGEPNV---------------SYICSR- 229
Y+ QIC+ + Y+ + C+ HRD+ +N+LV+ E +V Y R
Sbjct: 120 YSSQICKGMEYLGSRRCV---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVRE 176
Query: 230 ------YYRAPELIFGATEYTTAIDIWSTGCVMAELL 260
++ APE + ++ D+WS G V+ EL
Sbjct: 177 PGQSPIFWYAPESL-SDNIFSRQSDVWSFGVVLYELF 212
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 82/198 (41%), Gaps = 36/198 (18%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTD 149
+G GSFG V + + ++TG A+KKV + + ++ EL L P IV L +
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKV-RLEVFRAEELMACAGLTSPRIVPL----YGAVR 155
Query: 150 KXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGICHRD 209
+ ++ ++ + + + L Y+ Q L Y+H+ I H D
Sbjct: 156 EGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLG----QALEGLEYLHS-RRILHGD 210
Query: 210 IKPQNLLVKGEPNVSYIC-------------------------SRYYRAPELIFGATEYT 244
+K N+L+ + + + +C + + APE++ G +
Sbjct: 211 VKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS-CD 269
Query: 245 TAIDIWSTGCVMAELLLG 262
+D+WS+ C+M +L G
Sbjct: 270 AKVDVWSSCCMMLHMLNG 287
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 80/196 (40%), Gaps = 29/196 (14%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTD 149
+G GSFG VF+ T ++VAIK + D E++ +Q I L C S
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKII--DLEEAEDEIEDIQQ----EITVLSQCDSSYVT 84
Query: 150 KXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTY--QICRALAYIHNCIGICH 207
K + + + P ++ T +I + L Y+H+ I H
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKI-H 143
Query: 208 RDIKPQNLLVKGEPNV-------------------SYICSRYYRAPELIFGATEYTTAID 248
RDIK N+L+ + +V +++ + ++ APE+I + Y + D
Sbjct: 144 RDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-QQSAYDSKAD 202
Query: 249 IWSTGCVMAELLLGQP 264
IWS G EL G+P
Sbjct: 203 IWSLGITAIELAKGEP 218
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 49/217 (22%)
Query: 79 KQKVSYIAEHVVGTGSFGVVFQAKCR------ETGEIVAIKKVLQD----KRYKNRELQI 128
++ + YI++ +G G+FG V CR TG +VA+K++ +R RE+QI
Sbjct: 22 ERHLKYISQ--LGKGNFGSV--ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 77
Query: 129 MQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKL 187
++ L IV + + + + R++ + H+ R+ + L
Sbjct: 78 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLP------SGCLRDFLQRHRARLDASRLLL 131
Query: 188 YTYQICRALAYIHN--CIGICHRDIKPQNLLVKGEPNV---------------SYICSR- 229
Y+ QIC+ + Y+ + C+ HRD+ +N+LV+ E +V Y R
Sbjct: 132 YSSQICKGMEYLGSRRCV---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVRE 188
Query: 230 ------YYRAPELIFGATEYTTAIDIWSTGCVMAELL 260
++ APE + ++ D+WS G V+ EL
Sbjct: 189 PGQSPIFWYAPESL-SDNIFSRQSDVWSFGVVLYELF 224
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 89/226 (39%), Gaps = 46/226 (20%)
Query: 90 VGTGSFGVVFQAKCRE--TGEIVAIKKVLQDKRYKN-----------RELQIMQMLDHPN 136
+G+G F VV KCRE TG A K ++ +R K+ RE+ I++ + HPN
Sbjct: 19 LGSGVFAVV--KKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
++ L + + TD + +A S + + QI +
Sbjct: 76 VITLHEVYENKTD---VILILELVAGGELFDFLAEKESLTEEE-----ATEFLKQILNGV 127
Query: 197 AYIHNCIGICHRDIKPQNLLVKG----EPNVSYICSRYYRAPEL------IFGATEYTT- 245
Y+H + I H D+KP+N+++ +P + I + IFG E+
Sbjct: 128 YYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 246 ----------AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV 281
D+WS G + LL G F G++ + L + V
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 85/204 (41%), Gaps = 39/204 (19%)
Query: 87 EHVVGTGSFGVVFQAKCRETGE------IVAIKKVLQDKRYKN--RELQIMQMLDHPNIV 138
E ++G+G G V + R G+ I A+K +++ ++ E IM DHPNI+
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
L+ + +++ R + M L+ + + + Y
Sbjct: 114 RLE----GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGM---LRGVGAGMRY 166
Query: 199 IHNCIGICHRDIKPQNLLV-----------------KGEPNVSYICSR-----YYRAPEL 236
+ + +G HRD+ +N+LV + +P+ +Y + + APE
Sbjct: 167 LSD-LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEA 225
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
I T +++A D+WS G VM E+L
Sbjct: 226 IAFRT-FSSASDVWSFGVVMWEVL 248
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 90/226 (39%), Gaps = 46/226 (20%)
Query: 90 VGTGSFGVVFQAKCRE--TGEIVAIKKVLQDKRYKN-----------RELQIMQMLDHPN 136
+G+G F VV KCRE TG A K ++ +R K+ RE+ I++ + HPN
Sbjct: 19 LGSGQFAVV--KKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
++ L + + TD + +A S + + QI +
Sbjct: 76 VITLHEVYENKTD---VILILELVAGGELFDFLAEKESLTEEE-----ATEFLKQILNGV 127
Query: 197 AYIHNCIGICHRDIKPQNLLVKG----EPNVSYICSRYYRAPEL------IFGATEYTT- 245
Y+H+ + I H D+KP+N+++ +P + I + IFG E+
Sbjct: 128 YYLHS-LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 246 ----------AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV 281
D+WS G + LL G F G++ + L + V
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 82/198 (41%), Gaps = 36/198 (18%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTD 149
+G GSFG V + + ++TG A+KKV + + ++ EL L P IV L +
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKV-RLEVFRAEELMACAGLTSPRIVPL----YGAVR 136
Query: 150 KXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGICHRD 209
+ ++ ++ + + + L Y+ Q L Y+H+ I H D
Sbjct: 137 EGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLG----QALEGLEYLHS-RRILHGD 191
Query: 210 IKPQNLLVKGEPNVSYIC-------------------------SRYYRAPELIFGATEYT 244
+K N+L+ + + + +C + + APE++ G +
Sbjct: 192 VKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRS-CD 250
Query: 245 TAIDIWSTGCVMAELLLG 262
+D+WS+ C+M +L G
Sbjct: 251 AKVDVWSSCCMMLHMLNG 268
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 80/198 (40%), Gaps = 36/198 (18%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTD 149
VG GSFG V + K ++TG A+KKV + + ++ EL L P IV L +
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKV-RLEVFRVEELVACAGLSSPRIVPL----YGAVR 136
Query: 150 KXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGICHRD 209
+ ++ ++ + + + L Y+ Q L Y+H I H D
Sbjct: 137 EGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG----QALEGLEYLHT-RRILHGD 191
Query: 210 IKPQNLLVKGEPNVSYIC-------------------------SRYYRAPELIFGATEYT 244
+K N+L+ + + + +C + + APE++ G
Sbjct: 192 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-CD 250
Query: 245 TAIDIWSTGCVMAELLLG 262
+DIWS+ C+M +L G
Sbjct: 251 AKVDIWSSCCMMLHMLNG 268
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 79/204 (38%), Gaps = 39/204 (19%)
Query: 87 EHVVGTGSFGVVFQAKCRETGE---IVAIKKVLQDKRYKNR-----ELQIMQMLDHPNIV 138
E V+G G FG V + + G+ VAIK + K R E IM DHPNI+
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
L+ K +++ R + R +I + I + Y
Sbjct: 94 HLE----GVVTKCKPVMIITEYMENGSLDAFLR---KNDGRFTVIQLVGMLRGIGSGMKY 146
Query: 199 IHNCIGICHRDIKPQNLLVKG-----------------EPNVSYICSR-----YYRAPEL 236
+ + + HRD+ +N+LV +P +Y + APE
Sbjct: 147 LSDMSAV-HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 205
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
I ++T+A D+WS G VM E++
Sbjct: 206 I-AYRKFTSASDVWSYGIVMWEVM 228
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 80/198 (40%), Gaps = 36/198 (18%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTD 149
VG GSFG V + K ++TG A+KKV + + ++ EL L P IV L +
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKV-RLEVFRVEELVACAGLSSPRIVPL----YGAVR 120
Query: 150 KXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGICHRD 209
+ ++ ++ + + + L Y+ Q L Y+H I H D
Sbjct: 121 EGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG----QALEGLEYLHT-RRILHGD 175
Query: 210 IKPQNLLVKGEPNVSYIC-------------------------SRYYRAPELIFGATEYT 244
+K N+L+ + + + +C + + APE++ G
Sbjct: 176 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-CD 234
Query: 245 TAIDIWSTGCVMAELLLG 262
+DIWS+ C+M +L G
Sbjct: 235 AKVDIWSSCCMMLHMLNG 252
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 104/261 (39%), Gaps = 49/261 (18%)
Query: 90 VGTGSFGVVFQAKC-----RETGEIVAIKKVLQ-----DKRYKNRELQIM-QMLDHPNIV 138
+G G+FG V +A T VA+K + + + R EL+I+ + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARN----YSRIHQR-MPLIYVKLYTYQIC 193
L T R RN Y +++ + L ++ Y++Q+
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 194 RALAYIHNCIGICHRDIKPQNLLVKGEPNVSYICS-----------RYYR---------- 232
+ + ++ + I HRD+ +N+L+ E NV IC Y R
Sbjct: 155 KGMEFLASRKXI-HRDLAARNILL-SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 212
Query: 233 -APELIFGATEYTTAIDIWSTGCVMAELL-LGQPLFPGESGVDQLVEIIKVLGTPTREEI 290
APE IF YT D+WS G ++ E+ LG +PG V+I + +E
Sbjct: 213 MAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCRRLKEGT 264
Query: 291 KCMNPNYTEFKFPQIKPHPWH 311
+ P+YT + Q WH
Sbjct: 265 RMRAPDYTTPEMYQTMLDCWH 285
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 94/245 (38%), Gaps = 55/245 (22%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPNIVALKHCFF 145
V+G G+FG V +A+ AIKK+ + + E+ ++ L+H +V +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWL 72
Query: 146 STTDKXXXXXXXXXXXXXXTVNRIARN---YSRIH------QRMPLIYVKLYTYQICRAL 196
+ N Y IH QR Y +L+ QI AL
Sbjct: 73 ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDE--YWRLFR-QILEAL 129
Query: 197 AYIHNCIGICHRDIKPQNLLVKGEPNV--------------------------------- 223
+YIH+ GI HR++KP N+ + NV
Sbjct: 130 SYIHSQ-GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 224 SYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLG 283
S I + Y A E++ G Y ID +S G + E ++P +G ++ V I+K L
Sbjct: 189 SAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE-----XIYPFSTGXER-VNILKKLR 242
Query: 284 TPTRE 288
+ + E
Sbjct: 243 SVSIE 247
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 86/206 (41%), Gaps = 34/206 (16%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIK--KVLQDKRYK-NRELQIMQMLDHPNIVALKHCFF 145
+VG G++G V++ + +TG++ AIK V D+ + +E+ +++ H +A + F
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAF 90
Query: 146 STTDKXXXXXXXXXXXX---XXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ +V + +N + ++ +I R L+++H
Sbjct: 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLHQH 148
Query: 203 IGICHRDIKPQNLLVKGEPNV-------------------SYICSRYYRAPELIF----- 238
+ HRDIK QN+L+ V ++I + Y+ APE+I
Sbjct: 149 -KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENP 207
Query: 239 GATEYTTAIDIWSTGCVMAELLLGQP 264
AT Y D+WS G E+ G P
Sbjct: 208 DAT-YDFKSDLWSLGITAIEMAEGAP 232
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 45/207 (21%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR------ELQIMQMLDHPNIVALKHC 143
+G GSFG V +A+ G VA+K +++ + R E+ IM+ L HPNIV
Sbjct: 45 IGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV----L 98
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRI-----ARNYSRIHQRMPLIYVKLYTYQICRALAY 198
F + ++ R+ AR +R+ + Y + + + Y
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSM------AYDVAKGMNY 152
Query: 199 IHN-CIGICHRDIKPQNLLVKGEPNVS-------------YICSRY------YRAPELIF 238
+HN I HRD+K NLLV + V ++ S+ + APE++
Sbjct: 153 LHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLR 212
Query: 239 GATEYTTAIDIWSTGCVMAEL-LLGQP 264
+ D++S G ++ EL L QP
Sbjct: 213 DEPSNEKS-DVYSFGVILWELATLQQP 238
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 94/220 (42%), Gaps = 43/220 (19%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV-------LQDKRYKNRELQIMQMLDHPNIVALKH 142
+G+GSFG V++ K VA+K + Q + +KN E+ +++ H NI+
Sbjct: 20 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 71
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F + K + + + ++ + + + Q R + Y+H
Sbjct: 72 LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIAR----QTARGMDYLH-A 126
Query: 203 IGICHRDIKPQNLLVK-------GEPNVSYICSRY--------------YRAPELIF--G 239
I HRD+K N+ + G+ ++ + SR+ + APE+I
Sbjct: 127 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 186
Query: 240 ATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEII 279
+ Y+ D+++ G V+ EL+ GQ + + DQ++E++
Sbjct: 187 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 226
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 37/157 (23%)
Query: 180 MPLIYVKLYTYQICRALAYI--HNCIGICHRDIKPQNLLVKGEPNVSYICS--------- 228
+ L ++ Y++Q+ + + ++ CI HRD+ +N+L+ E NV IC
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILL-SEKNVVKICDFGLARDIYK 250
Query: 229 --RYYR-----------APELIFGATEYTTAIDIWSTGCVMAELL-LGQPLFPGESGVDQ 274
Y R APE IF YT D+WS G ++ E+ LG +PG
Sbjct: 251 DPDYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG------ 303
Query: 275 LVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWH 311
V+I + +E + P+YT + Q WH
Sbjct: 304 -VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 339
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 79/204 (38%), Gaps = 39/204 (19%)
Query: 87 EHVVGTGSFGVVFQAKCRETGE---IVAIKKVLQDKRYKNR-----ELQIMQMLDHPNIV 138
E V+G G FG V + + G+ VAIK + K R E IM DHPNI+
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
L+ K +++ R + R +I + I + Y
Sbjct: 73 HLE----GVVTKCKPVMIITEYMENGSLDAFLR---KNDGRFTVIQLVGMLRGIGSGMKY 125
Query: 199 IHNCIGICHRDIKPQNLLVKG-----------------EPNVSYICSR-----YYRAPEL 236
+ + + HRD+ +N+LV +P +Y + APE
Sbjct: 126 LSD-MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 184
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
I ++T+A D+WS G VM E++
Sbjct: 185 I-AYRKFTSASDVWSYGIVMWEVM 207
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 79/204 (38%), Gaps = 39/204 (19%)
Query: 87 EHVVGTGSFGVVFQAKCRETGE---IVAIKKVLQDKRYKNR-----ELQIMQMLDHPNIV 138
E V+G G FG V + + G+ VAIK + K R E IM DHPNI+
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
L+ K +++ R + R +I + I + Y
Sbjct: 79 HLE----GVVTKCKPVMIITEYMENGSLDAFLR---KNDGRFTVIQLVGMLRGIGSGMKY 131
Query: 199 IHNCIGICHRDIKPQNLLVKG-----------------EPNVSYICSR-----YYRAPEL 236
+ + + HRD+ +N+LV +P +Y + APE
Sbjct: 132 LSD-MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 190
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
I ++T+A D+WS G VM E++
Sbjct: 191 I-AYRKFTSASDVWSYGIVMWEVM 213
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 37/157 (23%)
Query: 180 MPLIYVKLYTYQICRALAYI--HNCIGICHRDIKPQNLLVKGEPNVSYICS--------- 228
+ L ++ Y++Q+ + + ++ CI HRD+ +N+L+ E NV IC
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILL-SEKNVVKICDFGLARDIYK 252
Query: 229 --RYYR-----------APELIFGATEYTTAIDIWSTGCVMAELL-LGQPLFPGESGVDQ 274
Y R APE IF YT D+WS G ++ E+ LG +PG
Sbjct: 253 DPDYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG------ 305
Query: 275 LVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWH 311
V+I + +E + P+YT + Q WH
Sbjct: 306 -VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 341
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 37/157 (23%)
Query: 180 MPLIYVKLYTYQICRALAYI--HNCIGICHRDIKPQNLLVKGEPNVSYICS--------- 228
+ L ++ Y++Q+ + + ++ CI HRD+ +N+L+ E NV IC
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILL-SEKNVVKICDFGLARDIYK 243
Query: 229 --RYYR-----------APELIFGATEYTTAIDIWSTGCVMAELL-LGQPLFPGESGVDQ 274
Y R APE IF YT D+WS G ++ E+ LG +PG
Sbjct: 244 DPDYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG------ 296
Query: 275 LVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWH 311
V+I + +E + P+YT + Q WH
Sbjct: 297 -VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 332
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 37/157 (23%)
Query: 180 MPLIYVKLYTYQICRALAYI--HNCIGICHRDIKPQNLLVKGEPNVSYICS--------- 228
+ L ++ Y++Q+ + + ++ CI HRD+ +N+L+ E NV IC
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILL-SEKNVVKICDFGLARDIYK 245
Query: 229 --RYYR-----------APELIFGATEYTTAIDIWSTGCVMAELL-LGQPLFPGESGVDQ 274
Y R APE IF YT D+WS G ++ E+ LG +PG
Sbjct: 246 DPDYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG------ 298
Query: 275 LVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWH 311
V+I + +E + P+YT + Q WH
Sbjct: 299 -VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 334
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 80/204 (39%), Gaps = 39/204 (19%)
Query: 87 EHVVGTGSFGVVFQAKCRETGE---IVAIKKVLQDKRYKNR-----ELQIMQMLDHPNIV 138
E V+G G FG V + + G+ VAIK + K R E IM DHPN+V
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
L+ + ++ R + + +I + I + Y
Sbjct: 108 HLE----GVVTRGKPVMIVIEFMENGALDAFLRKHD---GQFTVIQLVGMLRGIAAGMRY 160
Query: 199 IHNCIGICHRDIKPQNLLV-----------------KGEPNVSYICSR-----YYRAPEL 236
+ + +G HRD+ +N+LV + +P Y + + APE
Sbjct: 161 LAD-MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEA 219
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
I ++T+A D+WS G VM E++
Sbjct: 220 I-QYRKFTSASDVWSYGIVMWEVM 242
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 80/204 (39%), Gaps = 39/204 (19%)
Query: 87 EHVVGTGSFGVVFQAKCR--ETGEI-VAIKKVLQDKRYKNR-----ELQIMQMLDHPNIV 138
+ VVG G FG V + + EI VAIK + K R E IM DHPNI+
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
L+ K +++ R + + +I + I + Y
Sbjct: 110 RLE----GVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKY 162
Query: 199 IHNCIGICHRDIKPQNLLVKG-----------------EPNVSYICSR-----YYRAPEL 236
+ + +G HRD+ +N+L+ +P +Y + +PE
Sbjct: 163 LSD-MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
I ++T+A D+WS G V+ E++
Sbjct: 222 I-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 80/198 (40%), Gaps = 36/198 (18%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTD 149
+G GSFG V + K ++TG A+KKV + + ++ EL L P IV L +
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKV-RLEVFRVEELVACAGLSSPRIVPL----YGAVR 134
Query: 150 KXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGICHRD 209
+ ++ ++ + + + L Y+ Q L Y+H I H D
Sbjct: 135 EGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG----QALEGLEYLHT-RRILHGD 189
Query: 210 IKPQNLLVKGEPNVSYIC-------------------------SRYYRAPELIFGATEYT 244
+K N+L+ + + + +C + + APE++ G
Sbjct: 190 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-CD 248
Query: 245 TAIDIWSTGCVMAELLLG 262
+DIWS+ C+M +L G
Sbjct: 249 AKVDIWSSCCMMLHMLNG 266
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 102/264 (38%), Gaps = 56/264 (21%)
Query: 88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQ-----DKRYKNRELQIM-QMLDHPNIVALK 141
V+ +FG+ A CR VA+K + + + R EL+I+ + H N+V L
Sbjct: 44 QVIEADAFGIDKTATCR----TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 99
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMP---------LIYVKLYTYQI 192
T R RN ++ P L ++ Y++Q+
Sbjct: 100 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQV 159
Query: 193 CRALAYIHN--CIGICHRDIKPQNLLVKGEPNVSYICS-----------RYYR------- 232
+ + ++ + CI HRD+ +N+L+ E NV IC Y R
Sbjct: 160 AKGMEFLASRKCI---HRDLAARNILL-SEKNVVKICDFGLARDIYKDPDYVRKGDARLP 215
Query: 233 ----APELIFGATEYTTAIDIWSTGCVMAELL-LGQPLFPGESGVDQLVEIIKVLGTPTR 287
APE IF YT D+WS G ++ E+ LG +PG V+I + +
Sbjct: 216 LKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCRRLK 267
Query: 288 EEIKCMNPNYTEFKFPQIKPHPWH 311
E + P+YT + Q WH
Sbjct: 268 EGTRMRAPDYTTPEMYQTMLDCWH 291
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 87/207 (42%), Gaps = 45/207 (21%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR------ELQIMQMLDHPNIVALKHC 143
+G GSFG V +A+ G VA+K +++ + R E+ IM+ L HPNIV
Sbjct: 45 IGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV----L 98
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRI-----ARNYSRIHQRMPLIYVKLYTYQICRALAY 198
F + ++ R+ AR +R+ + Y + + + Y
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSM------AYDVAKGMNY 152
Query: 199 IHN-CIGICHRDIKPQNLLVKGEPNV-------------SYICSRY------YRAPELIF 238
+HN I HR++K NLLV + V +++ S+ + APE++
Sbjct: 153 LHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLR 212
Query: 239 GATEYTTAIDIWSTGCVMAEL-LLGQP 264
+ D++S G ++ EL L QP
Sbjct: 213 DEPSNEKS-DVYSFGVILWELATLQQP 238
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 81/204 (39%), Gaps = 39/204 (19%)
Query: 87 EHVVGTGSFGVVFQAKCR--ETGEI-VAIKKVLQDKRYKNR-----ELQIMQMLDHPNIV 138
+ VVG G FG V + + EI VAIK + K R E IM DHPNI+
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
L+ K +++ R + + +I + I + Y
Sbjct: 110 RLE----GVVTKSKPVMIVTEXMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKY 162
Query: 199 IHNCIGICHRDIKPQNLLVKG-----------------EPNVSYICSR-----YYRAPEL 236
+ + +G HRD+ +N+L+ +P +Y + +PE
Sbjct: 163 LSD-MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
I ++T+A D+WS G V+ E++
Sbjct: 222 I-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 37/157 (23%)
Query: 180 MPLIYVKLYTYQICRALAYIHN--CIGICHRDIKPQNLLVKGEPNVSYICS--------- 228
+ L ++ Y++Q+ + + ++ + CI HRD+ +N+L+ E NV IC
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILL-SEKNVVKICDFGLARDIYK 191
Query: 229 --RYYR-----------APELIFGATEYTTAIDIWSTGCVMAELL-LGQPLFPGESGVDQ 274
Y R APE IF YT D+WS G ++ E+ LG +PG
Sbjct: 192 DPDYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG------ 244
Query: 275 LVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWH 311
V+I + +E + P+YT + Q WH
Sbjct: 245 -VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 280
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 37/157 (23%)
Query: 180 MPLIYVKLYTYQICRALAYI--HNCIGICHRDIKPQNLLVKGEPNVSYICS--------- 228
+ L ++ Y++Q+ + + ++ CI HRD+ +N+L+ E NV IC
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILL-SEKNVVKICDFGLARDIXK 191
Query: 229 -------------RYYRAPELIFGATEYTTAIDIWSTGCVMAELL-LGQPLFPGESGVDQ 274
+ APE IF YT D+WS G ++ E+ LG +PG
Sbjct: 192 DPDXVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG------ 244
Query: 275 LVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWH 311
V+I + +E + P+YT + Q WH
Sbjct: 245 -VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 280
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 37/157 (23%)
Query: 180 MPLIYVKLYTYQICRALAYI--HNCIGICHRDIKPQNLLVKGEPNVSYICS--------- 228
+ L ++ Y++Q+ + + ++ CI HRD+ +N+L+ E NV IC
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILL-SEKNVVKICDFGLARDIXK 191
Query: 229 -------------RYYRAPELIFGATEYTTAIDIWSTGCVMAELL-LGQPLFPGESGVDQ 274
+ APE IF YT D+WS G ++ E+ LG +PG
Sbjct: 192 DPDXVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG------ 244
Query: 275 LVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWH 311
V+I + +E + P+YT + Q WH
Sbjct: 245 -VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 280
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 37/157 (23%)
Query: 180 MPLIYVKLYTYQICRALAYIHN--CIGICHRDIKPQNLLVKGEPNVSYICS--------- 228
+ L ++ Y++Q+ + + ++ + CI HRD+ +N+L+ E NV IC
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILL-SEKNVVKICDFGLARDIXK 200
Query: 229 -------------RYYRAPELIFGATEYTTAIDIWSTGCVMAELL-LGQPLFPGESGVDQ 274
+ APE IF YT D+WS G ++ E+ LG +PG
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG------ 253
Query: 275 LVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWH 311
V+I + +E + P+YT + Q WH
Sbjct: 254 -VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 37/157 (23%)
Query: 180 MPLIYVKLYTYQICRALAYIHN--CIGICHRDIKPQNLLVKGEPNVSYICS--------- 228
+ L ++ Y++Q+ + + ++ + CI HRD+ +N+L+ E NV IC
Sbjct: 182 LTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLS-EKNVVKICDFGLARDIYK 237
Query: 229 --RYYR-----------APELIFGATEYTTAIDIWSTGCVMAELL-LGQPLFPGESGVDQ 274
Y R APE IF YT D+WS G ++ E+ LG +PG
Sbjct: 238 DPDYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG------ 290
Query: 275 LVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWH 311
V+I + +E + P+YT + Q WH
Sbjct: 291 -VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 326
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 37/157 (23%)
Query: 180 MPLIYVKLYTYQICRALAYIHN--CIGICHRDIKPQNLLVKGEPNVSYICS--------- 228
+ L ++ Y++Q+ + + ++ + CI HRD+ +N+L+ E NV IC
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILL-SEKNVVKICDFGLARDIYK 200
Query: 229 --RYYR-----------APELIFGATEYTTAIDIWSTGCVMAELL-LGQPLFPGESGVDQ 274
Y R APE IF YT D+WS G ++ E+ LG +PG
Sbjct: 201 DPDYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG------ 253
Query: 275 LVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWH 311
V+I + +E + P+YT + Q WH
Sbjct: 254 -VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 33/155 (21%)
Query: 180 MPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVKGEPNVSYICS----------- 228
+ L ++ Y++Q+ + + ++ + I HRD+ +N+L+ E NV IC
Sbjct: 145 LTLEHLIXYSFQVAKGMEFLASRKXI-HRDLAARNILL-SEKNVVKICDFGLARDIXKDP 202
Query: 229 -----------RYYRAPELIFGATEYTTAIDIWSTGCVMAELL-LGQPLFPGESGVDQLV 276
+ APE IF YT D+WS G ++ E+ LG +PG V
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 254
Query: 277 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWH 311
+I + +E + P+YT + Q WH
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 37/157 (23%)
Query: 180 MPLIYVKLYTYQICRALAYIHN--CIGICHRDIKPQNLLVKGEPNVSYICS--------- 228
+ L ++ Y++Q+ + + ++ + CI HRD+ +N+L+ E NV IC
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILL-SEKNVVKICDFGLARDIYK 191
Query: 229 --RYYR-----------APELIFGATEYTTAIDIWSTGCVMAELL-LGQPLFPGESGVDQ 274
Y R APE IF YT D+WS G ++ E+ LG +PG
Sbjct: 192 DPDYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG------ 244
Query: 275 LVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWH 311
V+I + +E + P+YT + Q WH
Sbjct: 245 -VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 280
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 83/202 (41%), Gaps = 40/202 (19%)
Query: 90 VGTGSFGVV----FQAKCRETGEIVAIKKVLQDKRYKNR-----ELQIMQMLDHPNIVAL 140
+G G FG V + TGE+VA+K + D ++R E+ I++ L H +I+
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
K C +K R+Y H + L + L+ QIC +AY+H
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSL------RDYLPRHS-IGLAQLLLFAQQICEGMAYLH 134
Query: 201 NCIGICHRDIKPQNLLVKGEPNVSY----------ICSRYYR------------APELIF 238
+ I HR++ +N+L+ + V YYR APE +
Sbjct: 135 SQHYI-HRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL- 192
Query: 239 GATEYTTAIDIWSTGCVMAELL 260
++ A D+WS G + ELL
Sbjct: 193 KEYKFYYASDVWSFGVTLYELL 214
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 80/204 (39%), Gaps = 39/204 (19%)
Query: 87 EHVVGTGSFGVVFQAKCRETGEI---VAIKKVLQDKRYKNR-----ELQIMQMLDHPNIV 138
E V+G G FG V + + G+ VAIK + K R E IM DHPNI+
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
L+ K +++ + + + +I + I + Y
Sbjct: 87 HLE----GVVTKSKPVMIVTEYMENGSLDTFLK---KNDGQFTVIQLVGMLRGISAGMKY 139
Query: 199 IHNCIGICHRDIKPQNLLVKG-----------------EPNVSYICSR-----YYRAPEL 236
+ + +G HRD+ +N+L+ +P +Y + APE
Sbjct: 140 LSD-MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEA 198
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
I ++T+A D+WS G VM E++
Sbjct: 199 I-AFRKFTSASDVWSYGIVMWEVV 221
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 37/157 (23%)
Query: 180 MPLIYVKLYTYQICRALAYIHN--CIGICHRDIKPQNLLVKGEPNVSYICS--------- 228
+ L ++ Y++Q+ + + ++ + CI HRD+ +N+L+ E NV IC
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILL-SEKNVVKICDFGLARDIXK 200
Query: 229 -------------RYYRAPELIFGATEYTTAIDIWSTGCVMAELL-LGQPLFPGESGVDQ 274
+ APE IF YT D+WS G ++ E+ LG +PG
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG------ 253
Query: 275 LVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWH 311
V+I + +E + P+YT + Q WH
Sbjct: 254 -VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 37/157 (23%)
Query: 180 MPLIYVKLYTYQICRALAYIHN--CIGICHRDIKPQNLLVKGEPNVSYICS--------- 228
+ L ++ Y++Q+ + + ++ + CI HRD+ +N+L+ E NV IC
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILL-SEKNVVKICDFGLARDIYK 200
Query: 229 -------------RYYRAPELIFGATEYTTAIDIWSTGCVMAELL-LGQPLFPGESGVDQ 274
+ APE IF YT D+WS G ++ E+ LG +PG
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG------ 253
Query: 275 LVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWH 311
V+I + +E + P+YT + Q WH
Sbjct: 254 -VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 80/204 (39%), Gaps = 39/204 (19%)
Query: 87 EHVVGTGSFGVVFQAKCR--ETGEI-VAIKKVLQDKRYKNR-----ELQIMQMLDHPNIV 138
+ VVG G FG V + + EI VAIK + K R E IM DHPNI+
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
L+ K +++ R + + +I + I + Y
Sbjct: 110 RLE----GVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKY 162
Query: 199 IHNCIGICHRDIKPQNLLVKG-----------------EPNVSYICSR-----YYRAPEL 236
+ + +G HRD+ +N+L+ +P +Y + +PE
Sbjct: 163 LSD-MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
I ++T+A D+WS G V+ E++
Sbjct: 222 I-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 80/204 (39%), Gaps = 39/204 (19%)
Query: 87 EHVVGTGSFGVVFQAKCR--ETGEI-VAIKKVLQDKRYKNR-----ELQIMQMLDHPNIV 138
+ VVG G FG V + + EI VAIK + K R E IM DHPNI+
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
L+ K +++ R + + +I + I + Y
Sbjct: 110 RLE----GVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKY 162
Query: 199 IHNCIGICHRDIKPQNLLVKG-----------------EPNVSYICSR-----YYRAPEL 236
+ + +G HRD+ +N+L+ +P +Y + +PE
Sbjct: 163 LSD-MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
I ++T+A D+WS G V+ E++
Sbjct: 222 I-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 80/204 (39%), Gaps = 39/204 (19%)
Query: 87 EHVVGTGSFGVVFQAKCR--ETGEI-VAIKKVLQDKRYKNR-----ELQIMQMLDHPNIV 138
+ VVG G FG V + + EI VAIK + K R E IM DHPNI+
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
L+ K +++ R + + +I + I + Y
Sbjct: 110 RLE----GVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKY 162
Query: 199 IHNCIGICHRDIKPQNLLVKG-----------------EPNVSYICSR-----YYRAPEL 236
+ + +G HRD+ +N+L+ +P +Y + +PE
Sbjct: 163 LSD-MGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
I ++T+A D+WS G V+ E++
Sbjct: 222 I-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/331 (19%), Positives = 109/331 (32%), Gaps = 94/331 (28%)
Query: 73 GRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--------- 123
G +G+ Q Y + +G GS+GVV A A+K + + K +
Sbjct: 4 GSSGDCVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPP 63
Query: 124 ---------------------RELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXX--- 159
+E+ I++ LDHPN+V L +
Sbjct: 64 RGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQG 123
Query: 160 -XXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVK 218
T+ ++ + +R Y + + + Y+H I HRDIKP NLLV
Sbjct: 124 PVMEVPTLKPLSEDQAR-----------FYFQDLIKGIEYLHYQ-KIIHRDIKPSNLLVG 171
Query: 219 GEPNV---SYICSRYYRAPELIFGATEYT------------------TAIDIWSTGCVMA 257
+ ++ + S ++ + + T T A+D+W+ G +
Sbjct: 172 EDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLY 231
Query: 258 ELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKR 317
+ GQ F E I C++ +IK Q
Sbjct: 232 CFVFGQCPF-------------------MDERIMCLH--------SKIKSQALEFPDQPD 264
Query: 318 LPPEAVDLVCRFFQYSPNLRCTALEACVHPF 348
+ + DL+ R +P R E +HP+
Sbjct: 265 IAEDLKDLITRMLDKNPESRIVVPEIKLHPW 295
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 81/204 (39%), Gaps = 39/204 (19%)
Query: 87 EHVVGTGSFGVVFQAKCR--ETGEI-VAIKKVLQDKRYKNR-----ELQIMQMLDHPNIV 138
+ VVG G FG V + + EI VAIK + K R E IM DHPNI+
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
L+ K +++ R + + +I + I + Y
Sbjct: 110 RLE----GVVTKSKPVMIVTEXMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKY 162
Query: 199 IHNCIGICHRDIKPQNLLVKG-----------------EPNVSYICSR-----YYRAPEL 236
+ + +G HRD+ +N+L+ +P +Y + +PE
Sbjct: 163 LSD-MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
I ++T+A D+WS G V+ E++
Sbjct: 222 I-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 89/226 (39%), Gaps = 46/226 (20%)
Query: 90 VGTGSFGVVFQAKCRE--TGEIVAIKKVLQDKRYKN-----------RELQIMQMLDHPN 136
+G+G F VV KCRE TG A K ++ +R K+ RE+ I++ + HPN
Sbjct: 19 LGSGQFAVV--KKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
++ L + + TD + +A S + + QI +
Sbjct: 76 VITLHEVYENKTD---VILILELVAGGELFDFLAEKESLTEEE-----ATEFLKQILNGV 127
Query: 197 AYIHNCIGICHRDIKPQNLLVKG----EPNVSYICSRYYRAPEL------IFGATEYTT- 245
Y+H+ + I H D+KP+N+++ +P + I + IFG +
Sbjct: 128 YYLHS-LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAP 186
Query: 246 ----------AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV 281
D+WS G + LL G F G++ + L + V
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 80/204 (39%), Gaps = 39/204 (19%)
Query: 87 EHVVGTGSFGVVFQAKCR--ETGEI-VAIKKVLQDKRYKNR-----ELQIMQMLDHPNIV 138
+ VVG G FG V + + EI VAIK + K R E IM DHPNI+
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
L+ K +++ R + + +I + I + Y
Sbjct: 110 RLE----GVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKY 162
Query: 199 IHNCIGICHRDIKPQNLLVKG-----------------EPNVSYICSR-----YYRAPEL 236
+ + +G HRD+ +N+L+ +P +Y + +PE
Sbjct: 163 LSD-MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
I ++T+A D+WS G V+ E++
Sbjct: 222 I-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 80/204 (39%), Gaps = 39/204 (19%)
Query: 87 EHVVGTGSFGVVFQAKCR--ETGEI-VAIKKVLQDKRYKNR-----ELQIMQMLDHPNIV 138
+ VVG G FG V + + EI VAIK + K R E IM DHPNI+
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
L+ K +++ R + + +I + I + Y
Sbjct: 110 RLE----GVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKY 162
Query: 199 IHNCIGICHRDIKPQNLLVKG-----------------EPNVSYICSR-----YYRAPEL 236
+ + +G HRD+ +N+L+ +P +Y + +PE
Sbjct: 163 LSD-MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
I ++T+A D+WS G V+ E++
Sbjct: 222 I-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 87/222 (39%), Gaps = 39/222 (17%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNREL-------QIMQMLDHPNIVALK 141
V+G G+FG V K + T I A+K + + + K E ++ D I AL
Sbjct: 81 VIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALH 140
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+ F D+ + + S+ ++P + Y ++ A+ IH
Sbjct: 141 YAF---QDENHLYLVMDYYVGGDLLTLL----SKFEDKLPEDMARFYIGEMVLAIDSIHQ 193
Query: 202 CIGICHRDIKPQNLL--VKGEPNVSYICSRY------------------YRAPELI---- 237
+ HRDIKP N+L V G ++ S Y +PE++
Sbjct: 194 -LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAME 252
Query: 238 FGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEII 279
G +Y D WS G M E+L G+ F ES V+ +I+
Sbjct: 253 DGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 294
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 87/222 (39%), Gaps = 39/222 (17%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNREL-------QIMQMLDHPNIVALK 141
V+G G+FG V K + T I A+K + + + K E ++ D I AL
Sbjct: 97 VIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALH 156
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
+ F D+ + + S+ ++P + Y ++ A+ IH
Sbjct: 157 YAF---QDENHLYLVMDYYVGGDLLTLL----SKFEDKLPEDMARFYIGEMVLAIDSIHQ 209
Query: 202 CIGICHRDIKPQNLL--VKGEPNVSYICSRY------------------YRAPELI---- 237
+ HRDIKP N+L V G ++ S Y +PE++
Sbjct: 210 -LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAME 268
Query: 238 FGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEII 279
G +Y D WS G M E+L G+ F ES V+ +I+
Sbjct: 269 DGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 310
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 94/227 (41%), Gaps = 48/227 (21%)
Query: 90 VGTGSFGVVFQAKCRE--TGEIVAIK--KVLQDKRYK--------NRELQIMQMLDHPNI 137
+G+G F +V KCRE TG A K K Q + + RE+ I++ + HPNI
Sbjct: 20 LGSGQFAIV--KKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77
Query: 138 VALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
+ L + + TD + +A+ S + + ++K QI +
Sbjct: 78 ITLHDVYENRTD---VVLILELVSGGELFDFLAQKES-LSEEEATSFIK----QILDGVN 129
Query: 198 YIHNCIGICHRDIKPQNLLVKGE----PNVSYICSRYYRAPEL--------IFGATEYTT 245
Y+H I H D+KP+N+++ + P++ I + A E+ IFG E+
Sbjct: 130 YLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLI--DFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 246 -----------AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV 281
D+WS G + LL G F G++ + L I V
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV 233
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 80/204 (39%), Gaps = 39/204 (19%)
Query: 87 EHVVGTGSFGVVFQAKCR--ETGEI-VAIKKVLQDKRYKNR-----ELQIMQMLDHPNIV 138
+ VVG G FG V + + EI VAIK + K R E IM DHPNI+
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
L+ K +++ R + + +I + I + Y
Sbjct: 110 RLE----GVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKY 162
Query: 199 IHNCIGICHRDIKPQNLLVKG-----------------EPNVSYICSR-----YYRAPEL 236
+ + +G HRD+ +N+L+ +P +Y + +PE
Sbjct: 163 LSD-MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
I ++T+A D+WS G V+ E++
Sbjct: 222 I-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 80/210 (38%), Gaps = 49/210 (23%)
Query: 87 EHVVGTGSFGVVFQAKCRETGE---IVAIKKVLQDKRYKNR-----ELQIMQMLDHPNIV 138
E V+G G FG V + G+ VAIK + K R E IM DHPN++
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
L+ K +++ R + +I + I + Y
Sbjct: 98 HLE----GVVTKSTPVMIITEFMENGSLDSFLRQND---GQFTVIQLVGMLRGIAAGMKY 150
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNVSYIC-------SRY--------------------- 230
+ + + HRD+ +N+LV N + +C SR+
Sbjct: 151 LAD-MNYVHRDLAARNILV----NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR 205
Query: 231 YRAPELIFGATEYTTAIDIWSTGCVMAELL 260
+ APE I ++T+A D+WS G VM E++
Sbjct: 206 WTAPEAI-QYRKFTSASDVWSYGIVMWEVM 234
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 80/204 (39%), Gaps = 39/204 (19%)
Query: 87 EHVVGTGSFGVVFQAKCR--ETGEI-VAIKKVLQDKRYKNR-----ELQIMQMLDHPNIV 138
+ VVG G FG V + + EI VAIK + K R E IM DHPNI+
Sbjct: 48 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 107
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
L+ K +++ R + + +I + I + Y
Sbjct: 108 RLE----GVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKY 160
Query: 199 IHNCIGICHRDIKPQNLLVKG-----------------EPNVSYICSR-----YYRAPEL 236
+ + +G HRD+ +N+L+ +P +Y + +PE
Sbjct: 161 LSD-MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 219
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
I ++T+A D+WS G V+ E++
Sbjct: 220 I-AYRKFTSASDVWSYGIVLWEVM 242
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 76/200 (38%), Gaps = 38/200 (19%)
Query: 90 VGTGSFGVVFQA---KCRETGEIVAIK--KVLQDKRYKNRELQ---IMQMLDHPNIVALK 141
+G G FG V Q VAIK K + + LQ M+ DHP+IV L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
T+ R YS + L + LY YQ+ ALAY+ +
Sbjct: 78 GVI---TENPVWIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLSTALAYLES 129
Query: 202 CIGICHRDIKPQNLLVKGEPNV---SYICSRY-----------------YRAPELIFGAT 241
HRDI +N+LV V + SRY + APE I
Sbjct: 130 -KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFR 187
Query: 242 EYTTAIDIWSTGCVMAELLL 261
+T+A D+W G M E+L+
Sbjct: 188 RFTSASDVWMFGVCMWEILM 207
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 40/203 (19%)
Query: 90 VGTGSFGVV----FQAKCRETGEIVAIKKVLQDKRYKN-----RELQIMQMLDHPNIVAL 140
+G G FG V + + TGE VA+K + + + +E++I++ L H NIV
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNR-IARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
K T D ++ + +N ++I+ + L Y QIC+ + Y+
Sbjct: 89 KG--ICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYA----VQICKGMDYL 142
Query: 200 HNCIGICHRDIKPQNLLVKGEPNV---SYICSR-------------------YYRAPELI 237
HRD+ +N+LV+ E V + ++ ++ APE +
Sbjct: 143 -GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 201
Query: 238 FGATEYTTAIDIWSTGCVMAELL 260
+++ A D+WS G + ELL
Sbjct: 202 M-QSKFYIASDVWSFGVTLHELL 223
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 82/202 (40%), Gaps = 40/202 (19%)
Query: 90 VGTGSFGVV----FQAKCRETGEIVAIKKVLQDKRYKNR-----ELQIMQMLDHPNIVAL 140
+G G FG V + TGE+VA+K + D ++R E+ I++ L H +I+
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
K C +K R+Y H + L + L+ QIC +AY+H
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSL------RDYLPRHS-IGLAQLLLFAQQICEGMAYLH 134
Query: 201 NCIGICHRDIKPQNLLVKGEPNVSY----------ICSRYYR------------APELIF 238
I HR++ +N+L+ + V YYR APE +
Sbjct: 135 AQHYI-HRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL- 192
Query: 239 GATEYTTAIDIWSTGCVMAELL 260
++ A D+WS G + ELL
Sbjct: 193 KEYKFYYASDVWSFGVTLYELL 214
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 76/200 (38%), Gaps = 38/200 (19%)
Query: 90 VGTGSFGVVFQA---KCRETGEIVAIK--KVLQDKRYKNRELQ---IMQMLDHPNIVALK 141
+G G FG V Q VAIK K + + LQ M+ DHP+IV L
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
T+ R YS + L + LY YQ+ ALAY+ +
Sbjct: 80 GVI---TENPVWIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLSTALAYLES 131
Query: 202 CIGICHRDIKPQNLLVKGEPNV---SYICSRY-----------------YRAPELIFGAT 241
HRDI +N+LV V + SRY + APE I
Sbjct: 132 -KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFR 189
Query: 242 EYTTAIDIWSTGCVMAELLL 261
+T+A D+W G M E+L+
Sbjct: 190 RFTSASDVWMFGVCMWEILM 209
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 40/203 (19%)
Query: 90 VGTGSFGVV----FQAKCRETGEIVAIKKVLQDKRYKN-----RELQIMQMLDHPNIVAL 140
+G G FG V + + TGE VA+K + + + +E++I++ L H NIV
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNR-IARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
K T D ++ + +N ++I+ + L Y QIC+ + Y+
Sbjct: 77 KG--ICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYA----VQICKGMDYL 130
Query: 200 HNCIGICHRDIKPQNLLVKGEPNV---SYICSR-------------------YYRAPELI 237
HRD+ +N+LV+ E V + ++ ++ APE +
Sbjct: 131 -GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 189
Query: 238 FGATEYTTAIDIWSTGCVMAELL 260
+++ A D+WS G + ELL
Sbjct: 190 M-QSKFYIASDVWSFGVTLHELL 211
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 80/204 (39%), Gaps = 39/204 (19%)
Query: 87 EHVVGTGSFGVVFQAKCR--ETGEI-VAIKKVLQDKRYKNR-----ELQIMQMLDHPNIV 138
+ VVG G FG V + + EI VAIK + K R E IM DHPNI+
Sbjct: 38 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 97
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
L+ K +++ R + + +I + I + Y
Sbjct: 98 RLE----GVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKY 150
Query: 199 IHNCIGICHRDIKPQNLLVKG-----------------EPNVSYICSR-----YYRAPEL 236
+ + +G HRD+ +N+L+ +P +Y + +PE
Sbjct: 151 LSD-MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 209
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
I ++T+A D+WS G V+ E++
Sbjct: 210 I-AYRKFTSASDVWSYGIVLWEVM 232
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 81/204 (39%), Gaps = 39/204 (19%)
Query: 87 EHVVGTGSFGVVFQAKCR--ETGEI-VAIKKVLQDKRYKNR-----ELQIMQMLDHPNIV 138
+ VVG G FG V + + EI VAIK + K R E IM DHPNI+
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
L+ K +++ R + + +I + I + Y
Sbjct: 81 RLE----GVVTKSKPVMIVTEXMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKY 133
Query: 199 IHNCIGICHRDIKPQNLLVKG-----------------EPNVSYICSR-----YYRAPEL 236
+ + +G HRD+ +N+L+ +P +Y + +PE
Sbjct: 134 LSD-MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 192
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
I ++T+A D+WS G V+ E++
Sbjct: 193 I-AYRKFTSASDVWSYGIVLWEVM 215
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 76/200 (38%), Gaps = 38/200 (19%)
Query: 90 VGTGSFGVVFQA---KCRETGEIVAIK--KVLQDKRYKNRELQ---IMQMLDHPNIVALK 141
+G G FG V Q VAIK K + + LQ M+ DHP+IV L
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
T+ R YS + L + LY YQ+ ALAY+ +
Sbjct: 81 GVI---TENPVWIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLSTALAYLES 132
Query: 202 CIGICHRDIKPQNLLVKGEPNV---SYICSRY-----------------YRAPELIFGAT 241
HRDI +N+LV V + SRY + APE I
Sbjct: 133 -KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFR 190
Query: 242 EYTTAIDIWSTGCVMAELLL 261
+T+A D+W G M E+L+
Sbjct: 191 RFTSASDVWMFGVCMWEILM 210
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 84/204 (41%), Gaps = 39/204 (19%)
Query: 87 EHVVGTGSFGVVFQAKCRETGE------IVAIKKVLQDKRYKN--RELQIMQMLDHPNIV 138
E ++G+G G V + R G+ I A+K +++ ++ E IM DHPNI+
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
L+ + +++ R + M L+ + + + Y
Sbjct: 114 RLE----GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGM---LRGVGAGMRY 166
Query: 199 IHNCIGICHRDIKPQNLLV-----------------KGEPNVSYICSR-----YYRAPEL 236
+ + +G HRD+ +N+LV + +P+ + + + APE
Sbjct: 167 LSD-LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEA 225
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
I T +++A D+WS G VM E+L
Sbjct: 226 IAFRT-FSSASDVWSFGVVMWEVL 248
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 76/200 (38%), Gaps = 38/200 (19%)
Query: 90 VGTGSFGVVFQA---KCRETGEIVAIK--KVLQDKRYKNRELQ---IMQMLDHPNIVALK 141
+G G FG V Q VAIK K + + LQ M+ DHP+IV L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
T+ R YS + L + LY YQ+ ALAY+ +
Sbjct: 75 GVI---TENPVWIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLSTALAYLES 126
Query: 202 CIGICHRDIKPQNLLVKGEPNV---SYICSRY-----------------YRAPELIFGAT 241
HRDI +N+LV V + SRY + APE I
Sbjct: 127 -KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFR 184
Query: 242 EYTTAIDIWSTGCVMAELLL 261
+T+A D+W G M E+L+
Sbjct: 185 RFTSASDVWMFGVCMWEILM 204
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 87/217 (40%), Gaps = 52/217 (23%)
Query: 82 VSYIA-EHVVGTGSFGVVFQAKCRETGE---IVAIKKVLQDKRYKNR-----ELQIMQML 132
VSY+ E V+G G FG V + + + G+ VAIK + + R E IM
Sbjct: 15 VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF 74
Query: 133 DHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQ 191
+HPNI+ L+ ++ N ++ R++ + +I +
Sbjct: 75 EHPNIIRLEGVVTNSM--------PVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRG 126
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVKGEPNVSYIC-------SRY-------------- 230
I + Y+ + HRD+ +N+LV N + +C SR+
Sbjct: 127 IASGMRYLAE-MSYVHRDLAARNILV----NSNLVCKVSDFGLSRFLEENSSDPTETSSL 181
Query: 231 -------YRAPELIFGATEYTTAIDIWSTGCVMAELL 260
+ APE I ++T+A D WS G VM E++
Sbjct: 182 GGKIPIRWTAPEAI-AFRKFTSASDAWSYGIVMWEVM 217
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 76/200 (38%), Gaps = 38/200 (19%)
Query: 90 VGTGSFGVVFQA---KCRETGEIVAIK--KVLQDKRYKNRELQ---IMQMLDHPNIVALK 141
+G G FG V Q VAIK K + + LQ M+ DHP+IV L
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
T+ R YS + L + LY YQ+ ALAY+ +
Sbjct: 106 GVI---TENPVWIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLSTALAYLES 157
Query: 202 CIGICHRDIKPQNLLVKGEPNV---SYICSRY-----------------YRAPELIFGAT 241
HRDI +N+LV V + SRY + APE I
Sbjct: 158 -KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFR 215
Query: 242 EYTTAIDIWSTGCVMAELLL 261
+T+A D+W G M E+L+
Sbjct: 216 RFTSASDVWMFGVCMWEILM 235
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 84/222 (37%), Gaps = 39/222 (17%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNREL-------QIMQMLDHPNIVALK 141
V+G G+FG V K + ++ A+K + + + K E ++ D I L
Sbjct: 81 VIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTL- 139
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
H F + T+ S+ R+P + Y ++ A+ +H
Sbjct: 140 HYAFQDDNNLYLVMDYYVGGDLLTL------LSKFEDRLPEEMARFYLAEMVIAIDSVHQ 193
Query: 202 CIGICHRDIKPQNLLVKGEPNVSY--------------------ICSRYYRAPELI---- 237
+ HRDIKP N+L+ ++ + + Y +PE++
Sbjct: 194 -LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAME 252
Query: 238 FGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEII 279
G Y D WS G M E+L G+ F ES V+ +I+
Sbjct: 253 GGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 294
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 80/204 (39%), Gaps = 39/204 (19%)
Query: 87 EHVVGTGSFGVVFQAKCR--ETGEI-VAIKKVLQDKRYKNR-----ELQIMQMLDHPNIV 138
+ VVG G FG V + + EI VAIK + K R E IM DHPNI+
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
L+ K +++ R + + +I + I + Y
Sbjct: 81 RLE----GVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKY 133
Query: 199 IHNCIGICHRDIKPQNLLVKG-----------------EPNVSYICSR-----YYRAPEL 236
+ + +G HRD+ +N+L+ +P +Y + +PE
Sbjct: 134 LSD-MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 192
Query: 237 IFGATEYTTAIDIWSTGCVMAELL 260
I ++T+A D+WS G V+ E++
Sbjct: 193 I-AYRKFTSASDVWSYGIVLWEVM 215
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 76/200 (38%), Gaps = 38/200 (19%)
Query: 90 VGTGSFGVVFQA---KCRETGEIVAIK--KVLQDKRYKNRELQ---IMQMLDHPNIVALK 141
+G G FG V Q VAIK K + + LQ M+ DHP+IV L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
T+ R YS + L + LY YQ+ ALAY+ +
Sbjct: 78 GVI---TENPVWIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLSTALAYLES 129
Query: 202 CIGICHRDIKPQNLLVKGEPNV---SYICSRY-----------------YRAPELIFGAT 241
HRDI +N+LV V + SRY + APE I
Sbjct: 130 -KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFR 187
Query: 242 EYTTAIDIWSTGCVMAELLL 261
+T+A D+W G M E+L+
Sbjct: 188 RFTSASDVWMFGVCMWEILM 207
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 92/217 (42%), Gaps = 49/217 (22%)
Query: 79 KQKVSYIAEHVVGTGSFGVVFQAKCR------ETGEIVAIKKVLQD----KRYKNRELQI 128
++ + YI++ +G G+FG V CR TG +VA+K++ +R RE+QI
Sbjct: 6 ERHLKYISQ--LGKGNFGSV--ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 61
Query: 129 MQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKL 187
++ L IV + + + R++ + H+ R+ + L
Sbjct: 62 LKALHSDFIVKYRGVSYGPG------RPELRLVMEYLPSGCLRDFLQRHRARLDASRLLL 115
Query: 188 YTYQICRALAYIHN--CIGICHRDIKPQNLLVKGEPNVSYI------------------- 226
Y+ QIC+ + Y+ + C+ HRD+ +N+LV+ E +V
Sbjct: 116 YSSQICKGMEYLGSRRCV---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVRE 172
Query: 227 ---CSRYYRAPELIFGATEYTTAIDIWSTGCVMAELL 260
++ APE + ++ D+WS G V+ EL
Sbjct: 173 PGQSPIFWYAPESL-SDNIFSRQSDVWSFGVVLYELF 208
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 76/200 (38%), Gaps = 38/200 (19%)
Query: 90 VGTGSFGVVFQA---KCRETGEIVAIK--KVLQDKRYKNRELQ---IMQMLDHPNIVALK 141
+G G FG V Q VAIK K + + LQ M+ DHP+IV L
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
T+ R YS + L + LY YQ+ ALAY+ +
Sbjct: 83 GVI---TENPVWIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLSTALAYLES 134
Query: 202 CIGICHRDIKPQNLLVKGEPNV---SYICSRY-----------------YRAPELIFGAT 241
HRDI +N+LV V + SRY + APE I
Sbjct: 135 -KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFR 192
Query: 242 EYTTAIDIWSTGCVMAELLL 261
+T+A D+W G M E+L+
Sbjct: 193 RFTSASDVWMFGVCMWEILM 212
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 78/176 (44%), Gaps = 25/176 (14%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLV---KGEPNV---------------SYICSR 229
+ +Q+ A+ + HNC G+ HRDIK +N+L+ +GE + + +R
Sbjct: 120 FFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 178
Query: 230 YYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTRE 288
Y PE I + + +WS G ++ +++ G P E + V + + + +
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH 238
Query: 289 EIK-CMNPNYTEF-KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALE 342
I+ C+ ++ F +I+ HPW + LP E ++ P+ + ALE
Sbjct: 239 LIRWCLALRPSDRPTFEEIQNHPWMQ--DVLLPQETAEIHLHSLSPGPS-KAAALE 291
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 94/220 (42%), Gaps = 43/220 (19%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV-------LQDKRYKNRELQIMQMLDHPNIVALKH 142
+G+GSFG V++ K VA+K + Q + +KN E+ +++ H NI+
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 83
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F + K + + + ++ + LI + Q R + Y+H
Sbjct: 84 LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMK-KLIDI---ARQTARGMDYLH-A 138
Query: 203 IGICHRDIKPQNLLVK-------GEPNVSYICSRY--------------YRAPELIF--G 239
I HRD+K N+ + G+ ++ SR+ + APE+I
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 240 ATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEII 279
+ Y+ D+++ G V+ EL+ GQ + + DQ++E++
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 87/217 (40%), Gaps = 52/217 (23%)
Query: 82 VSYIA-EHVVGTGSFGVVFQAKCRETGE---IVAIKKVLQDKRYKNR-----ELQIMQML 132
VSY+ E V+G G FG V + + + G+ VAIK + + R E IM
Sbjct: 13 VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF 72
Query: 133 DHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQ 191
+HPNI+ L+ ++ N ++ R++ + +I +
Sbjct: 73 EHPNIIRLEGVVTNSM--------PVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRG 124
Query: 192 ICRALAYIHNCIGICHRDIKPQNLLVKGEPNVSYIC-------SRY-------------- 230
I + Y+ + HRD+ +N+LV N + +C SR+
Sbjct: 125 IASGMRYLAE-MSYVHRDLAARNILV----NSNLVCKVSDFGLSRFLEENSSDPTYTSSL 179
Query: 231 -------YRAPELIFGATEYTTAIDIWSTGCVMAELL 260
+ APE I ++T+A D WS G VM E++
Sbjct: 180 GGKIPIRWTAPEAI-AFRKFTSASDAWSYGIVMWEVM 215
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 103/261 (39%), Gaps = 49/261 (18%)
Query: 90 VGTGSFGVVFQAKC-----RETGEIVAIKKVLQ-----DKRYKNRELQIM-QMLDHPNIV 138
+G G+FG V +A T VA+K + + + R EL+I+ + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARN----YSRIHQR-MPLIYVKLYTYQIC 193
L T R RN Y +++ + L ++ Y++Q+
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 194 RALAYIHNCIGICHRDIKPQNLLVKGEPNVSYICS-----------RYYR---------- 232
+ + ++ + I HRD+ +N+L+ E NV I Y R
Sbjct: 155 KGMEFLASRKXI-HRDLAARNILL-SEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKW 212
Query: 233 -APELIFGATEYTTAIDIWSTGCVMAELL-LGQPLFPGESGVDQLVEIIKVLGTPTREEI 290
APE IF YT D+WS G ++ E+ LG +PG V+I + +E
Sbjct: 213 MAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFXRRLKEGT 264
Query: 291 KCMNPNYTEFKFPQIKPHPWH 311
+ P+YT + Q WH
Sbjct: 265 RMRAPDYTTPEMYQTMLDCWH 285
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 80/201 (39%), Gaps = 40/201 (19%)
Query: 90 VGTGSFGVVFQA---KCRETGEIVAIK--KVLQDKRYKNRELQ---IMQMLDHPNIVALK 141
+G G FG V Q VAIK K + + LQ M+ DHP+IV L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAYIH 200
T+ + R++ ++ + + L + LY YQ+ ALAY+
Sbjct: 458 GVITENP--------VWIIMELCTLGEL-RSFLQVRKFSLDLASLILYAYQLSTALAYLE 508
Query: 201 NCIGICHRDIKPQNLLVKGEPNV---SYICSRY-----------------YRAPELIFGA 240
+ HRDI +N+LV V + SRY + APE I
Sbjct: 509 S-KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NF 566
Query: 241 TEYTTAIDIWSTGCVMAELLL 261
+T+A D+W G M E+L+
Sbjct: 567 RRFTSASDVWMFGVCMWEILM 587
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQ----MLDHPNIVALKHCF 144
V+G G+F V K ++TG++ A+K + + K E+ + +L + + +
Sbjct: 68 VIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLH 127
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
F+ D+ + + S+ +R+P + Y +I A+ +H +G
Sbjct: 128 FAFQDENYLYLVMEYYVGGDLLTLL----SKFGERIPAEMARFYLAEIVMAIDSVHR-LG 182
Query: 205 ICHRDIKPQNLLV 217
HRDIKP N+L+
Sbjct: 183 YVHRDIKPDNILL 195
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 76/200 (38%), Gaps = 38/200 (19%)
Query: 90 VGTGSFGVVFQA---KCRETGEIVAIK--KVLQDKRYKNRELQ---IMQMLDHPNIVALK 141
+G G FG V Q VAIK K + + LQ M+ DHP+IV L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
T+ R +S + L + LY YQ+ ALAY+ +
Sbjct: 78 GVI---TENPVWIIMELCTLGELRSFLQVRKFS-----LDLASLILYAYQLSTALAYLES 129
Query: 202 CIGICHRDIKPQNLLVKGEPNV---SYICSRY-----------------YRAPELIFGAT 241
HRDI +N+LV V + SRY + APE I
Sbjct: 130 -KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESI-NFR 187
Query: 242 EYTTAIDIWSTGCVMAELLL 261
+T+A D+W G M E+L+
Sbjct: 188 RFTSASDVWMFGVCMWEILM 207
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 80/202 (39%), Gaps = 40/202 (19%)
Query: 90 VGTGSFGVV----FQAKCRETGEIVAIKKVLQDKRYKNR-----ELQIMQMLDHPNIVAL 140
+G G FG V + TGE+VA+K + D ++R E+ I++ L H +I+
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
K C R+Y H + L + L+ QIC +AY+H
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSL------RDYLPRHS-IGLAQLLLFAQQICEGMAYLH 151
Query: 201 NCIGICHRDIKPQNLLVKG----------------EPNVSYICSR------YYRAPELIF 238
I HRD+ +N+L+ E + Y ++ APE +
Sbjct: 152 AQHYI-HRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECL- 209
Query: 239 GATEYTTAIDIWSTGCVMAELL 260
++ A D+WS G + ELL
Sbjct: 210 KEYKFYYASDVWSFGVTLYELL 231
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 80/201 (39%), Gaps = 40/201 (19%)
Query: 90 VGTGSFGVVFQA---KCRETGEIVAIK--KVLQDKRYKNRELQ---IMQMLDHPNIVALK 141
+G G FG V Q VAIK K + + LQ M+ DHP+IV L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAYIH 200
T+ + R++ ++ + + L + LY YQ+ ALAY+
Sbjct: 458 GVITENP--------VWIIMELCTLGEL-RSFLQVRKFSLDLASLILYAYQLSTALAYLE 508
Query: 201 NCIGICHRDIKPQNLLVKGEPNV---SYICSRY-----------------YRAPELIFGA 240
+ HRDI +N+LV V + SRY + APE I
Sbjct: 509 S-KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NF 566
Query: 241 TEYTTAIDIWSTGCVMAELLL 261
+T+A D+W G M E+L+
Sbjct: 567 RRFTSASDVWMFGVCMWEILM 587
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLV---KGEPNV---------------SYICSR 229
+ +Q+ A+ + HNC G+ HRDIK +N+L+ +GE + + +R
Sbjct: 115 FFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 173
Query: 230 YYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTRE 288
Y PE I + + +WS G ++ +++ G P E + V + + + +
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQH 233
Query: 289 EIK-CMNPNYTEF-KFPQIKPHPW 310
I+ C+ ++ F +I+ HPW
Sbjct: 234 LIRWCLALRPSDRPTFEEIQNHPW 257
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLV---KGEPNV---------------SYICSR 229
+ +Q+ A+ + HNC G+ HRDIK +N+L+ +GE + + +R
Sbjct: 147 FFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 205
Query: 230 YYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTRE 288
Y PE I + + +WS G ++ +++ G P E + V + + + +
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQH 265
Query: 289 EIK-CMNPNYTEF-KFPQIKPHPW 310
I+ C+ ++ F +I+ HPW
Sbjct: 266 LIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLV---KGEPNV---------------SYICSR 229
+ +Q+ A+ + HNC G+ HRDIK +N+L+ +GE + + +R
Sbjct: 147 FFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 205
Query: 230 YYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTRE 288
Y PE I + + +WS G ++ +++ G P E + V + + + +
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQH 265
Query: 289 EIK-CMNPNYTEF-KFPQIKPHPW 310
I+ C+ ++ F +I+ HPW
Sbjct: 266 LIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLV---KGEPNV---------------SYICSR 229
+ +Q+ A+ + HNC G+ HRDIK +N+L+ +GE + + +R
Sbjct: 148 FFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 206
Query: 230 YYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTRE 288
Y PE I + + +WS G ++ +++ G P E + V + + + +
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQH 266
Query: 289 EIK-CMNPNYTEF-KFPQIKPHPW 310
I+ C+ ++ F +I+ HPW
Sbjct: 267 LIRWCLALRPSDRPTFEEIQNHPW 290
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLV---KGEPNV---------------SYICSR 229
+ +Q+ A+ + HNC G+ HRDIK +N+L+ +GE + + +R
Sbjct: 148 FFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 206
Query: 230 YYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTRE 288
Y PE I + + +WS G ++ +++ G P E + V + + + +
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQH 266
Query: 289 EIK-CMNPNYTEF-KFPQIKPHPW 310
I+ C+ ++ F +I+ HPW
Sbjct: 267 LIRWCLALRPSDRPTFEEIQNHPW 290
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLV---KGEPNV---------------SYICSR 229
+ +Q+ A+ + HNC G+ HRDIK +N+L+ +GE + + +R
Sbjct: 162 FFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 220
Query: 230 YYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTRE 288
Y PE I + + +WS G ++ +++ G P E + V + + + +
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH 280
Query: 289 EIK-CMNPNYTEF-KFPQIKPHPW 310
I+ C+ ++ F +I+ HPW
Sbjct: 281 LIRWCLALRPSDRPTFEEIQNHPW 304
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLV---KGEPNV---------------SYICSR 229
+ +Q+ A+ + HNC G+ HRDIK +N+L+ +GE + + +R
Sbjct: 118 FFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 176
Query: 230 YYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTRE 288
Y PE I + + +WS G ++ +++ G P E + V + + + +
Sbjct: 177 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH 236
Query: 289 EIK-CMNPNYTEF-KFPQIKPHPW 310
I+ C+ ++ F +I+ HPW
Sbjct: 237 LIRWCLALRPSDRPTFEEIQNHPW 260
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLV---KGEPNV---------------SYICSR 229
+ +Q+ A+ + HNC G+ HRDIK +N+L+ +GE + + +R
Sbjct: 119 FFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 177
Query: 230 YYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTRE 288
Y PE I + + +WS G ++ +++ G P E + V + + + +
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH 237
Query: 289 EIK-CMNPNYTEF-KFPQIKPHPW 310
I+ C+ ++ F +I+ HPW
Sbjct: 238 LIRWCLALRPSDRPTFEEIQNHPW 261
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLV---KGEPNV---------------SYICSR 229
+ +Q+ A+ + HNC G+ HRDIK +N+L+ +GE + + +R
Sbjct: 115 FFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 173
Query: 230 YYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTRE 288
Y PE I + + +WS G ++ +++ G P E + V + + + +
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH 233
Query: 289 EIK-CMNPNYTEF-KFPQIKPHPW 310
I+ C+ ++ F +I+ HPW
Sbjct: 234 LIRWCLALRPSDRPTFEEIQNHPW 257
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 76/200 (38%), Gaps = 38/200 (19%)
Query: 90 VGTGSFGVVFQA---KCRETGEIVAIK--KVLQDKRYKNRELQ---IMQMLDHPNIVALK 141
+G G FG V Q VAIK K + + LQ M+ DHP+IV L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
T+ R +S + L + LY YQ+ ALAY+ +
Sbjct: 78 GVI---TENPVWIIMELCTLGELRSFLQVRKFS-----LDLASLILYAYQLSTALAYLES 129
Query: 202 CIGICHRDIKPQNLLVKGEPNV---SYICSRY-----------------YRAPELIFGAT 241
HRDI +N+LV V + SRY + APE I
Sbjct: 130 -KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFR 187
Query: 242 EYTTAIDIWSTGCVMAELLL 261
+T+A D+W G M E+L+
Sbjct: 188 RFTSASDVWMFGVCMWEILM 207
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLV---KGEPNV---------------SYICSR 229
+ +Q+ A+ + HNC G+ HRDIK +N+L+ +GE + + +R
Sbjct: 119 FFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 177
Query: 230 YYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTRE 288
Y PE I + + +WS G ++ +++ G P E + V + + + +
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH 237
Query: 289 EIK-CMNPNYTEF-KFPQIKPHPW 310
I+ C+ ++ F +I+ HPW
Sbjct: 238 LIRWCLALRPSDRPTFEEIQNHPW 261
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLV---KGEPNV---------------SYICSR 229
+ +Q+ A+ + HNC G+ HRDIK +N+L+ +GE + + +R
Sbjct: 120 FFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 178
Query: 230 YYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTRE 288
Y PE I + + +WS G ++ +++ G P E + V + + + +
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH 238
Query: 289 EIK-CMNPNYTEF-KFPQIKPHPW 310
I+ C+ ++ F +I+ HPW
Sbjct: 239 LIRWCLALRPSDRPTFEEIQNHPW 262
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLV---KGEPNV---------------SYICSR 229
+ +Q+ A+ + HNC G+ HRDIK +N+L+ +GE + + +R
Sbjct: 147 FFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 205
Query: 230 YYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTRE 288
Y PE I + + +WS G ++ +++ G P E + V + + + +
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH 265
Query: 289 EIK-CMNPNYTEF-KFPQIKPHPW 310
I+ C+ ++ F +I+ HPW
Sbjct: 266 LIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLV---KGEPNV---------------SYICSR 229
+ +Q+ A+ + HNC G+ HRDIK +N+L+ +GE + + +R
Sbjct: 162 FFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 220
Query: 230 YYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTRE 288
Y PE I + + +WS G ++ +++ G P E + V + + + +
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH 280
Query: 289 EIK-CMNPNYTEF-KFPQIKPHPW 310
I+ C+ ++ F +I+ HPW
Sbjct: 281 LIRWCLALRPSDRPTFEEIQNHPW 304
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 81/202 (40%), Gaps = 40/202 (19%)
Query: 90 VGTGSFGVV----FQAKCRETGEIVAIKKVL-----QDKRYKNRELQIMQMLDHPNIVAL 140
+G G FG V + TGE+VA+K + Q + RE++I++ L H +IV
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
K C +K R+Y H + L + L+ QIC +AY+H
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSL------RDYLPRHC-VGLAQLLLFAQQICEGMAYLH 128
Query: 201 NCIGICHRDIKPQNLLVKGEPNVSY----------ICSRYYR------------APELIF 238
I HR + +N+L+ + V YYR APE +
Sbjct: 129 AQHYI-HRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL- 186
Query: 239 GATEYTTAIDIWSTGCVMAELL 260
++ A D+WS G + ELL
Sbjct: 187 KECKFYYASDVWSFGVTLYELL 208
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 81/202 (40%), Gaps = 40/202 (19%)
Query: 90 VGTGSFGVV----FQAKCRETGEIVAIKKVL-----QDKRYKNRELQIMQMLDHPNIVAL 140
+G G FG V + TGE+VA+K + Q + RE++I++ L H +IV
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
K C +K R+Y H + L + L+ QIC +AY+H
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSL------RDYLPRHC-VGLAQLLLFAQQICEGMAYLH 129
Query: 201 NCIGICHRDIKPQNLLVKGEPNVSY----------ICSRYYR------------APELIF 238
I HR + +N+L+ + V YYR APE +
Sbjct: 130 AQHYI-HRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL- 187
Query: 239 GATEYTTAIDIWSTGCVMAELL 260
++ A D+WS G + ELL
Sbjct: 188 KECKFYYASDVWSFGVTLYELL 209
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLV---KGEPNV---------------SYICSR 229
+ +Q+ A+ + HNC G+ HRDIK +N+L+ +GE + + +R
Sbjct: 135 FFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 193
Query: 230 YYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTRE 288
Y PE I + + +WS G ++ +++ G P E + V + + + +
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH 253
Query: 289 EIK-CMNPNYTEF-KFPQIKPHPW 310
I+ C+ ++ F +I+ HPW
Sbjct: 254 LIRWCLALRPSDRPTFEEIQNHPW 277
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLV---KGEPNV---------------SYICSR 229
+ +Q+ A+ + HNC G+ HRDIK +N+L+ +GE + + +R
Sbjct: 120 FFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 178
Query: 230 YYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTRE 288
Y PE I + + +WS G ++ +++ G P E + V + + + +
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH 238
Query: 289 EIK-CMNPNYTEF-KFPQIKPHPW 310
I+ C+ ++ F +I+ HPW
Sbjct: 239 LIRWCLALRPSDRPTFEEIQNHPW 262
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 114/300 (38%), Gaps = 66/300 (22%)
Query: 81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-KRYKNRELQIMQMLD-HPNIV 138
K+S+ + V+G G+ G + + + VA+K++L + + +RE+Q+++ D HPN++
Sbjct: 23 KISFCPKDVLGHGAEGTIVYRGMFDNRD-VAVKRILPECFSFADREVQLLRESDEHPNVI 81
Query: 139 ALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
+ T+K T+ H + I + Q LA+
Sbjct: 82 R-----YFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITL---LQQTTSGLAH 133
Query: 199 IHNCIGICHRDIKPQNLLVK---GEPNVSYICSRYYRAPELIFGATEY------------ 243
+H+ + I HRD+KP N+L+ + + S + +L G +
Sbjct: 134 LHS-LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGW 192
Query: 244 --------------TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 289
T +DI+S GCV ++ + P + + I+ LG +
Sbjct: 193 IAPEMLSEDCKENPTYTVDIFSAGCVFY-YVISEGSHPFGKSLQRQANIL--LGACS--- 246
Query: 290 IKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFF 349
+ C++P +K A +L+ + P R +A HPFF
Sbjct: 247 LDCLHP-------------------EKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLV---KGEPNV---------------SYICSR 229
+ +Q+ A+ + HNC G+ HRDIK +N+L+ +GE + + +R
Sbjct: 154 FFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 212
Query: 230 YYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTRE 288
Y PE I + + +WS G ++ +++ G P E + V + + + +
Sbjct: 213 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH 272
Query: 289 EIK-CMNPNYTEF-KFPQIKPHPW 310
I+ C+ ++ F +I+ HPW
Sbjct: 273 LIRWCLALRPSDRPTFEEIQNHPW 296
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 19/93 (20%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLV---KGEPNV---------------SYICSR 229
+ +Q+ A+ + HNC G+ HRDIK +N+L+ +GE + + +R
Sbjct: 142 FFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 200
Query: 230 YYRAPELIFGATEYTTAIDIWSTGCVMAELLLG 262
Y PE I + + +WS G ++ +++ G
Sbjct: 201 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 90/213 (42%), Gaps = 37/213 (17%)
Query: 83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ------IMQMLDHPN 136
++ ++++G G FG V++ + + G +VA+K+ L+++R + ELQ ++ M H N
Sbjct: 39 NFSNKNILGRGGFGKVYKGRLAD-GTLVAVKR-LKEERXQGGELQFQTEVEMISMAVHRN 96
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQI--CR 194
++ L+ + T++ + R + PL + K + R
Sbjct: 97 LLRLRGFCMTPTERLLVYPYMANGSVASCLR------ERPESQPPLDWPKRQRIALGSAR 150
Query: 195 ALAYIHNCIG--ICHRDIKPQNLLVKGEPN-----------VSYICSRYYRAPELIFG-- 239
LAY+H+ I HRD+K N+L+ E + Y A G
Sbjct: 151 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHI 210
Query: 240 ATEYTTA------IDIWSTGCVMAELLLGQPLF 266
A EY + D++ G ++ EL+ GQ F
Sbjct: 211 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 243
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLV---KGEPNV---------------SYICSR 229
+ +Q+ A+ + HNC G+ HRDIK +N+L+ +GE + + +R
Sbjct: 134 FFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 192
Query: 230 YYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTRE 288
Y PE I + + +WS G ++ +++ G P E + V + + + +
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH 252
Query: 289 EIK-CMNPNYTEF-KFPQIKPHPW 310
I+ C+ ++ F +I+ HPW
Sbjct: 253 LIRWCLALRPSDRPTFEEIQNHPW 276
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 19/93 (20%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLV---KGEPNV---------------SYICSR 229
+ +Q+ A+ + HNC G+ HRDIK +N+L+ +GE + + +R
Sbjct: 162 FFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 220
Query: 230 YYRAPELIFGATEYTTAIDIWSTGCVMAELLLG 262
Y PE I + + +WS G ++ +++ G
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 19/93 (20%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLV---KGEPNV---------------SYICSR 229
+ +Q+ A+ + HNC G+ HRDIK +N+L+ +GE + + +R
Sbjct: 167 FFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 225
Query: 230 YYRAPELIFGATEYTTAIDIWSTGCVMAELLLG 262
Y PE I + + +WS G ++ +++ G
Sbjct: 226 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 19/93 (20%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLV---KGEPNV---------------SYICSR 229
+ +Q+ A+ + HNC G+ HRDIK +N+L+ +GE + + +R
Sbjct: 147 FFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 205
Query: 230 YYRAPELIFGATEYTTAIDIWSTGCVMAELLLG 262
Y PE I + + +WS G ++ +++ G
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 19/93 (20%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLV---KGEPNV---------------SYICSR 229
+ +Q+ A+ + HNC G+ HRDIK +N+L+ +GE + + +R
Sbjct: 135 FFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 193
Query: 230 YYRAPELIFGATEYTTAIDIWSTGCVMAELLLG 262
Y PE I + + +WS G ++ +++ G
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 19/93 (20%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLV---KGEPNV---------------SYICSR 229
+ +Q+ A+ + HNC G+ HRDIK +N+L+ +GE + + +R
Sbjct: 134 FFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 192
Query: 230 YYRAPELIFGATEYTTAIDIWSTGCVMAELLLG 262
Y PE I + + +WS G ++ +++ G
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 19/93 (20%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLV---KGEPNV---------------SYICSR 229
+ +Q+ A+ + HNC G+ HRDIK +N+L+ +GE + + +R
Sbjct: 148 FFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 206
Query: 230 YYRAPELIFGATEYTTAIDIWSTGCVMAELLLG 262
Y PE I + + +WS G ++ +++ G
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 90/213 (42%), Gaps = 37/213 (17%)
Query: 83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ------IMQMLDHPN 136
++ ++++G G FG V++ + + G +VA+K+ L+++R + ELQ ++ M H N
Sbjct: 31 NFXNKNILGRGGFGKVYKGRLAD-GXLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRN 88
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQI--CR 194
++ L+ + T++ + R + PL + K + R
Sbjct: 89 LLRLRGFCMTPTERLLVYPYMANGSVASCLR------ERPESQPPLDWPKRQRIALGSAR 142
Query: 195 ALAYIHNCIG--ICHRDIKPQNLLVKGEPN-----------VSYICSRYYRAPELIFG-- 239
LAY+H+ I HRD+K N+L+ E + Y A G
Sbjct: 143 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHI 202
Query: 240 ATEYTTA------IDIWSTGCVMAELLLGQPLF 266
A EY + D++ G ++ EL+ GQ F
Sbjct: 203 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 235
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 19/93 (20%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLV---KGEPNV---------------SYICSR 229
+ +Q+ A+ + HNC G+ HRDIK +N+L+ +GE + + +R
Sbjct: 135 FFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 193
Query: 230 YYRAPELIFGATEYTTAIDIWSTGCVMAELLLG 262
Y PE I + + +WS G ++ +++ G
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQ------DKRYKNRELQIMQML-DHPNIVALKH 142
+G+G FG VF+ R G I AIK+ + D++ RE+ +L H ++V
Sbjct: 19 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVV---R 75
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F + + + I+ NY RI +K Q+ R L YIH+
Sbjct: 76 YFSAWAEDDHMLIQNEYCNGGSLADAISENY-RIMSYFKEAELKDLLLQVGRGLRYIHS- 133
Query: 203 IGICHRDIKPQNLLV 217
+ + H DIKP N+ +
Sbjct: 134 MSLVHMDIKPSNIFI 148
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 19/93 (20%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLV---KGEPNV---------------SYICSR 229
+ +Q+ A+ + HNC G+ HRDIK +N+L+ +GE + + +R
Sbjct: 148 FFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 206
Query: 230 YYRAPELIFGATEYTTAIDIWSTGCVMAELLLG 262
Y PE I + + +WS G ++ +++ G
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQ------DKRYKNRELQIMQML-DHPNIVALKH 142
+G+G FG VF+ R G I AIK+ + D++ RE+ +L H ++V
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVV---R 73
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F + + + I+ NY RI +K Q+ R L YIH+
Sbjct: 74 YFSAWAEDDHMLIQNEYCNGGSLADAISENY-RIMSYFKEAELKDLLLQVGRGLRYIHS- 131
Query: 203 IGICHRDIKPQNLLV 217
+ + H DIKP N+ +
Sbjct: 132 MSLVHMDIKPSNIFI 146
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQ------DKRYKNRELQIMQML-DHPNIVALKH 142
+G+G FG VF+ R G I AIK+ + D++ RE+ +L H ++V
Sbjct: 15 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVV---R 71
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F + + + I+ NY RI +K Q+ R L YIH+
Sbjct: 72 YFSAWAEDDHMLIQNEYCNGGSLADAISENY-RIMSYFKEAELKDLLLQVGRGLRYIHS- 129
Query: 203 IGICHRDIKPQNLLV 217
+ + H DIKP N+ +
Sbjct: 130 MSLVHMDIKPSNIFI 144
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQ------DKRYKNRELQIMQML-DHPNIVALKH 142
+G+G FG VF+ R G I AIK+ + D++ RE+ +L H ++V
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVV---R 73
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F + + + I+ NY RI +K Q+ R L YIH+
Sbjct: 74 YFSAWAEDDHMLIQNEYCNGGSLADAISENY-RIMSYFKEAELKDLLLQVGRGLRYIHS- 131
Query: 203 IGICHRDIKPQNLLV 217
+ + H DIKP N+ +
Sbjct: 132 MSLVHMDIKPSNIFI 146
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 92/220 (41%), Gaps = 43/220 (19%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV-------LQDKRYKNRELQIMQMLDHPNIVALKH 142
+G+GSFG V++ K VA+K + Q + +KN E+ +++ H NI+
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 83
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F + + + + ++ + + + Q R + Y+H
Sbjct: 84 LFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIAR----QTARGMDYLH-A 138
Query: 203 IGICHRDIKPQNLLVK-------GEPNVSYICSRY--------------YRAPELIF--G 239
I HRD+K N+ + G+ ++ SR+ + APE+I
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 240 ATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEII 279
+ Y+ D+++ G V+ EL+ GQ + + DQ++E++
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 41/223 (18%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKRYKNRELQIMQMLDHPNIV 138
++ ++G G+ VF+ + ++TG++ AIK L+ + RE ++++ L+H NIV
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 139 ALKHCFFSTTDKXXXXXXXXX-XXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
L TT + TV N + + LI ++ + +
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLR----DVVGGMN 126
Query: 198 YIHNCIGICHRDIKPQNLL-VKGEPNVS-YICSRYYRAPEL--------IFGATE----- 242
++ GI HR+IKP N++ V GE S Y + + A EL ++G E
Sbjct: 127 HLREN-GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPD 185
Query: 243 --------------YTTAIDIWSTGCVMAELLLGQ-PLFPGES 270
Y +D+WS G G P P E
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG 228
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 48/227 (21%)
Query: 90 VGTGSFGVVFQAKCRE--TGEIVAIKKVLQDKRYKNR----------ELQIMQMLDHPNI 137
+G+G F +V KCRE TG A K + + + +R E+ I++ + H N+
Sbjct: 20 LGSGQFAIV--KKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 138 VALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
+ L + + TD + +A+ S + + ++K QI +
Sbjct: 78 ITLHDVYENRTD---VVLILELVSGGELFDFLAQKES-LSEEEATSFIK----QILDGVN 129
Query: 198 YIHNCIGICHRDIKPQNLLVKGE----PNVSYICSRYYRAPEL--------IFGATEYTT 245
Y+H I H D+KP+N+++ + P++ I + A E+ IFG E+
Sbjct: 130 YLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLI--DFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 246 -----------AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV 281
D+WS G + LL G F G++ + L I V
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV 233
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 48/227 (21%)
Query: 90 VGTGSFGVVFQAKCRE--TGEIVAIKKVLQDKRYKNR----------ELQIMQMLDHPNI 137
+G+G F +V KCRE TG A K + + + +R E+ I++ + H N+
Sbjct: 20 LGSGQFAIV--KKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 138 VALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
+ L + + TD + +A+ S + + ++K QI +
Sbjct: 78 ITLHDVYENRTD---VVLILELVSGGELFDFLAQKES-LSEEEATSFIK----QILDGVN 129
Query: 198 YIHNCIGICHRDIKPQNLLVKGE----PNVSYICSRYYRAPEL--------IFGATEYTT 245
Y+H I H D+KP+N+++ + P++ I + A E+ IFG E+
Sbjct: 130 YLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLI--DFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 246 -----------AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV 281
D+WS G + LL G F G++ + L I V
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV 233
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 85/212 (40%), Gaps = 47/212 (22%)
Query: 90 VGTGSFGVVFQAKCR----ETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVAL 140
+G G+FG VF A+C E +++ K L++ ++ RE +++ ML H +IV
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR- 107
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM---------PLIYVKLYTY- 190
FF + +NR R++ + + PL +L
Sbjct: 108 ---FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164
Query: 191 -QICRALAYIHNCIGICHRDIKPQNLLVK-------GEPNVS--YICSRYYRA------- 233
Q+ + Y+ + HRD+ +N LV G+ +S + YYR
Sbjct: 165 SQVAAGMVYLAG-LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 223
Query: 234 -----PELIFGATEYTTAIDIWSTGCVMAELL 260
PE I ++TT D+WS G V+ E+
Sbjct: 224 IRWMPPESIL-YRKFTTESDVWSFGVVLWEIF 254
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 73/198 (36%), Gaps = 25/198 (12%)
Query: 87 EHVVGTGSFGVVFQAKCRETGE---IVAIKKVLQDKRYKNR-----ELQIMQMLDHPNIV 138
E V+G G FG V + G+ VAIK + K R E IM DHPN++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 139 ALKHCFFSTT---------DKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYT 189
L+ +T + TV ++ I M + Y
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYV 131
Query: 190 YQICRALAYIHNCIGICH-RDIKPQNLLVKGEPNVSYICSR------YYRAPELIFGATE 242
++ A + N +C D L + +Y + + APE I +
Sbjct: 132 HRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI-QYRK 190
Query: 243 YTTAIDIWSTGCVMAELL 260
+T+A D+WS G VM E++
Sbjct: 191 FTSASDVWSYGIVMWEVM 208
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 48/227 (21%)
Query: 90 VGTGSFGVVFQAKCRE--TGEIVAIKKVLQDKRYKNR----------ELQIMQMLDHPNI 137
+G+G F +V KCRE TG A K + + + +R E+ I++ + H N+
Sbjct: 20 LGSGQFAIV--KKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 138 VALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
+ L + + TD + +A+ S + + ++K QI +
Sbjct: 78 ITLHDVYENRTD---VVLILELVSGGELFDFLAQKES-LSEEEATSFIK----QILDGVN 129
Query: 198 YIHNCIGICHRDIKPQNLLVKGE----PNVSYICSRYYRAPEL--------IFGATEYTT 245
Y+H I H D+KP+N+++ + P++ I + A E+ IFG E+
Sbjct: 130 YLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLI--DFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 246 -----------AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV 281
D+WS G + LL G F G++ + L I V
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV 233
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 85/212 (40%), Gaps = 47/212 (22%)
Query: 90 VGTGSFGVVFQAKCR----ETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVAL 140
+G G+FG VF A+C E +++ K L++ ++ RE +++ ML H +IV
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR- 78
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM---------PLIYVKLYTY- 190
FF + +NR R++ + + PL +L
Sbjct: 79 ---FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 135
Query: 191 -QICRALAYIHNCIGICHRDIKPQNLLVK-------GEPNVS--YICSRYYRA------- 233
Q+ + Y+ + HRD+ +N LV G+ +S + YYR
Sbjct: 136 SQVAAGMVYLAG-LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 194
Query: 234 -----PELIFGATEYTTAIDIWSTGCVMAELL 260
PE I ++TT D+WS G V+ E+
Sbjct: 195 IRWMPPESIL-YRKFTTESDVWSFGVVLWEIF 225
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 48/227 (21%)
Query: 90 VGTGSFGVVFQAKCRE--TGEIVAIKKVLQDKRYKNR----------ELQIMQMLDHPNI 137
+G+G F +V KCRE TG A K + + + +R E+ I++ + H N+
Sbjct: 20 LGSGQFAIV--KKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 138 VALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
+ L + + TD + +A+ S + + ++K QI +
Sbjct: 78 ITLHDVYENRTD---VVLILELVSGGELFDFLAQKES-LSEEEATSFIK----QILDGVN 129
Query: 198 YIHNCIGICHRDIKPQNLLVKGE----PNVSYICSRYYRAPEL--------IFGATEYTT 245
Y+H I H D+KP+N+++ + P++ I + A E+ IFG E+
Sbjct: 130 YLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLI--DFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 246 -----------AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV 281
D+WS G + LL G F G++ + L I V
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV 233
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 41/223 (18%)
Query: 84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKRYKNRELQIMQMLDHPNIV 138
++ ++G G+ VF+ + ++TG++ AIK L+ + RE ++++ L+H NIV
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 139 ALKHCFFSTTDKXXXXXXXX-XXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
L TT + TV N + + LI ++ + +
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLR----DVVGGMN 126
Query: 198 YIHNCIGICHRDIKPQNLL-VKGEPNVS-YICSRYYRAPEL--------IFGATEYT--- 244
++ GI HR+IKP N++ V GE S Y + + A EL ++G EY
Sbjct: 127 HLREN-GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPD 185
Query: 245 ----------------TAIDIWSTGCVMAELLLGQ-PLFPGES 270
+D+WS G G P P E
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG 228
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 85/212 (40%), Gaps = 47/212 (22%)
Query: 90 VGTGSFGVVFQAKCR----ETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVAL 140
+G G+FG VF A+C E +++ K L++ ++ RE +++ ML H +IV
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR- 84
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM---------PLIYVKLYTY- 190
FF + +NR R++ + + PL +L
Sbjct: 85 ---FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 141
Query: 191 -QICRALAYIHNCIGICHRDIKPQNLLVK-------GEPNVS--YICSRYYRA------- 233
Q+ + Y+ + HRD+ +N LV G+ +S + YYR
Sbjct: 142 SQVAAGMVYLAG-LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 200
Query: 234 -----PELIFGATEYTTAIDIWSTGCVMAELL 260
PE I ++TT D+WS G V+ E+
Sbjct: 201 IRWMPPESIL-YRKFTTESDVWSFGVVLWEIF 231
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 23/85 (27%)
Query: 206 CHRDIKPQNLLVKGEPNVSYIC---------------------SRYYRAPELIFGATEYT 244
HRD+KP+N+LV + + +Y+ + YY APE F + T
Sbjct: 156 THRDVKPENILVSAD-DFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPER-FSESHAT 213
Query: 245 TAIDIWSTGCVMAELLLGQPLFPGE 269
DI++ CV+ E L G P + G+
Sbjct: 214 YRADIYALTCVLYECLTGSPPYQGD 238
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 48/227 (21%)
Query: 90 VGTGSFGVVFQAKCRE--TGEIVAIKKVLQDKRYKNR----------ELQIMQMLDHPNI 137
+G+G F +V KCRE TG A K + + + +R E+ I++ + H N+
Sbjct: 20 LGSGQFAIV--KKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 138 VALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
+ L + + TD + +A+ S + + ++K QI +
Sbjct: 78 ITLHDVYENRTD---VVLILELVSGGELFDFLAQKES-LSEEEATSFIK----QILDGVN 129
Query: 198 YIHNCIGICHRDIKPQNLLVKGE----PNVSYICSRYYRAPEL--------IFGATEYTT 245
Y+H I H D+KP+N+++ + P++ I + A E+ IFG E+
Sbjct: 130 YLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLI--DFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 246 -----------AIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV 281
D+WS G + LL G F G++ + L I V
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV 233
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 93/220 (42%), Gaps = 43/220 (19%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV-------LQDKRYKNRELQIMQMLDHPNIVALKH 142
+G+GSFG V++ K VA+K + Q + +KN E+ +++ H NI+
Sbjct: 43 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 94
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F + K + + + I + +I + Q + + Y+H
Sbjct: 95 LFMGYSTKPQLAIVTQWCEG----SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH-A 149
Query: 203 IGICHRDIKPQNLLVK-------GEPNVSYICSRY--------------YRAPELIFGAT 241
I HRD+K N+ + G+ ++ + SR+ + APE+I
Sbjct: 150 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 209
Query: 242 E--YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEII 279
+ Y+ D+++ G V+ EL+ GQ + + DQ++ ++
Sbjct: 210 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 249
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 93/220 (42%), Gaps = 43/220 (19%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV-------LQDKRYKNRELQIMQMLDHPNIVALKH 142
+G+GSFG V++ K VA+K + Q + +KN E+ +++ H NI+
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 95
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F + K + + + I + +I + Q + + Y+H
Sbjct: 96 LFMGYSTKPQLAIVTQWCEG----SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH-A 150
Query: 203 IGICHRDIKPQNLLVK-------GEPNVSYICSRY--------------YRAPELIFGAT 241
I HRD+K N+ + G+ ++ + SR+ + APE+I
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 242 E--YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEII 279
+ Y+ D+++ G V+ EL+ GQ + + DQ++ ++
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 94/220 (42%), Gaps = 43/220 (19%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV-------LQDKRYKNRELQIMQMLDHPNIVALKH 142
+G+GSFG V++ K VA+K + Q + +KN E+ +++ H NI L
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNI--LLF 69
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ST + + + + I + +I + Q + + Y+H
Sbjct: 70 MGYSTAPQLAIVTQWCEG------SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH-A 122
Query: 203 IGICHRDIKPQNLLVK-------GEPNVSYICSRY--------------YRAPELIFGAT 241
I HRD+K N+ + G+ ++ + SR+ + APE+I
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 242 E--YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEII 279
+ Y+ D+++ G V+ EL+ GQ + + DQ++ ++
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 93/220 (42%), Gaps = 43/220 (19%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV-------LQDKRYKNRELQIMQMLDHPNIVALKH 142
+G+GSFG V++ K VA+K + Q + +KN E+ +++ H NI+
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 72
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F + K + + + I + +I + Q + + Y+H
Sbjct: 73 LFMGYSTKPQLAIVTQWCEG----SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH-A 127
Query: 203 IGICHRDIKPQNLLVK-------GEPNVSYICSRY--------------YRAPELIFGAT 241
I HRD+K N+ + G+ ++ + SR+ + APE+I
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 242 E--YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEII 279
+ Y+ D+++ G V+ EL+ GQ + + DQ++ ++
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 227
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 93/220 (42%), Gaps = 43/220 (19%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV-------LQDKRYKNRELQIMQMLDHPNIVALKH 142
+G+GSFG V++ K VA+K + Q + +KN E+ +++ H NI+
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 72
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F + K + + + I + +I + Q + + Y+H
Sbjct: 73 LFMGYSTKPQLAIVTQWCEG----SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH-A 127
Query: 203 IGICHRDIKPQNLLVK-------GEPNVSYICSRY--------------YRAPELIFGAT 241
I HRD+K N+ + G+ ++ + SR+ + APE+I
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 242 E--YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEII 279
+ Y+ D+++ G V+ EL+ GQ + + DQ++ ++
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 227
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 93/220 (42%), Gaps = 43/220 (19%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV-------LQDKRYKNRELQIMQMLDHPNIVALKH 142
+G+GSFG V++ K VA+K + Q + +KN E+ +++ H NI+
Sbjct: 18 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 69
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F + K + + + I + +I + Q + + Y+H
Sbjct: 70 LFMGYSTKPQLAIVTQWCEG----SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH-A 124
Query: 203 IGICHRDIKPQNLLVK-------GEPNVSYICSRY--------------YRAPELIFGAT 241
I HRD+K N+ + G+ ++ + SR+ + APE+I
Sbjct: 125 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 184
Query: 242 E--YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEII 279
+ Y+ D+++ G V+ EL+ GQ + + DQ++ ++
Sbjct: 185 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 224
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 93/220 (42%), Gaps = 43/220 (19%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV-------LQDKRYKNRELQIMQMLDHPNIVALKH 142
+G+GSFG V++ K VA+K + Q + +KN E+ +++ H NI+
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 67
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F + K + + + I + +I + Q + + Y+H
Sbjct: 68 LFMGYSTKPQLAIVTQWCEG----SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH-A 122
Query: 203 IGICHRDIKPQNLLVK-------GEPNVSYICSRY--------------YRAPELIFGAT 241
I HRD+K N+ + G+ ++ + SR+ + APE+I
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 242 E--YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEII 279
+ Y+ D+++ G V+ EL+ GQ + + DQ++ ++
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 84/213 (39%), Gaps = 32/213 (15%)
Query: 80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPN 136
++ +H +G G FG V++ ++ VA+K + +D +E +M+ + HPN
Sbjct: 9 ERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 68
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
+V L + + R +R Q + + + QI A+
Sbjct: 69 LVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAM 122
Query: 197 AYIHNCIGICHRDIKPQNLLV-----------------KGEPNVSYICSRY---YRAPEL 236
Y+ HRD+ +N LV G+ ++ +++ + APE
Sbjct: 123 EYLEK-KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPES 181
Query: 237 IFGATEYTTAIDIWSTGCVMAEL-LLGQPLFPG 268
+ +++ D+W+ G ++ E+ G +PG
Sbjct: 182 L-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 213
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 114/294 (38%), Gaps = 55/294 (18%)
Query: 75 NGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKRYKN------ 123
G QK S ++ +G+G+FG V+ A +E + V +K KVL+D ++
Sbjct: 19 EGEYSQKYSTMSP--LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKV 76
Query: 124 -RELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPL 182
E+ I+ ++H NI+ + F + ++ A + H R+
Sbjct: 77 TLEIAILSRVEHANIIKVLDIF-----ENQGFFQLVMEKHGSGLDLFA--FIDRHPRLDE 129
Query: 183 IYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLV------------------KGEPNVS 224
Q+ A+ Y+ I HRDIK +N+++ +G+ +
Sbjct: 130 PLASYIFRQLVSAVGYLR-LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT 188
Query: 225 YICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQ-PLFPGESGVD---------- 273
+ + Y APE++ G +++WS G + L+ + P E V+
Sbjct: 189 FCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVS 248
Query: 274 -QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ---IKPHPWHKVFQKRLPPEAV 323
+L+ ++ L P E + T+ Q + + W +VF+ P V
Sbjct: 249 KELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLADYTWEEVFRVNKPESGV 302
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 86/230 (37%), Gaps = 53/230 (23%)
Query: 79 KQKVSYIAEHVVGTGSFGVVFQAKC-----RETGEIVAIKKVLQDKRYK-----NRELQI 128
+ + Y+ + +G G+FG VFQA+ E +VA+K + ++ RE +
Sbjct: 46 RNNIEYVRD--IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAAL 103
Query: 129 MQMLDHPNIVAL--------KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM 180
M D+PNIV L C TV ++ + R+
Sbjct: 104 MAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 163
Query: 181 ------PLIYVK--LYTYQICRALAYIHNCIGICHRDIKPQNLLVKGEPNVSYIC----- 227
PL + Q+ +AY+ HRD+ +N LV GE V I
Sbjct: 164 SSPGPPPLSCAEQLCIARQVAAGMAYLSE-RKFVHRDLATRNCLV-GENMVVKIADFGLS 221
Query: 228 -----SRYYRA------------PELIFGATEYTTAIDIWSTGCVMAELL 260
+ YY+A PE IF YTT D+W+ G V+ E+
Sbjct: 222 RNIYSADYYKADGNDAIPIRWMPPESIF-YNRYTTESDVWAYGVVLWEIF 270
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 68/166 (40%), Gaps = 36/166 (21%)
Query: 191 QICRALAYIHNCIGICHRDIKPQNLLVK-----GEPN-VSYICSRYY-RAPEL--IFGAT 241
QI + Y+H I H D+KPQN+L+ G+ V + SR A EL I G
Sbjct: 139 QILEGVYYLHQN-NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTP 197
Query: 242 EY-----------TTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 290
EY TTA D+W+ G + LL F GE + + I +V + E
Sbjct: 198 EYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETF 257
Query: 291 KCMNPNYTEF------KFPQIKP-------HPWHKV--FQKRLPPE 321
++ T+F K P+ +P H W + F+ PE
Sbjct: 258 SSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHPE 303
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 13/138 (9%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALKH 142
+G GSF V++ ET VA + LQD++ E Q ++ L HPNIV
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCE-LQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
+ ST T+ + Y + + + ++ + QI + L ++H
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTL----KTYLKRFKVXKIKVLRSWCRQILKGLQFLHTR 148
Query: 203 IG-ICHRDIKPQNLLVKG 219
I HRD+K N+ + G
Sbjct: 149 TPPIIHRDLKCDNIFITG 166
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 89/222 (40%), Gaps = 43/222 (19%)
Query: 71 IGGRNGNSKQKVSYIAEHV----------VGTGSFGVVFQAKCRETGEIVAIKKVLQDKR 120
+G +N S + Y + + +GTG FGVV K R + VAIK + +
Sbjct: 3 LGSKNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM 61
Query: 121 YKN---RELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH 177
++ E ++M L H +V L + T + +N + R
Sbjct: 62 SEDEFIEEAKVMMNLSHEKLVQL---YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQ 118
Query: 178 QRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLV--KGEPNVS-YICSRY---- 230
+ L K +C A+ Y+ + HRD+ +N LV +G VS + SRY
Sbjct: 119 TQQLLEMCK----DVCEAMEYLES-KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173
Query: 231 -------------YRAPELIFGATEYTTAIDIWSTGCVMAEL 259
+ PE++ +++++ DIW+ G +M E+
Sbjct: 174 EETSSVGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVLMWEI 214
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 89/222 (40%), Gaps = 43/222 (19%)
Query: 71 IGGRNGNSKQKVSYIAEHV----------VGTGSFGVVFQAKCRETGEIVAIKKVLQDKR 120
+G +N S + Y + + +GTG FGVV K R + VAIK + +
Sbjct: 3 LGSKNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM 61
Query: 121 YKN---RELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH 177
++ E ++M L H +V L + T + +N + R
Sbjct: 62 SEDEFIEEAKVMMNLSHEKLVQL---YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQ 118
Query: 178 QRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLV--KGEPNVS-YICSRY---- 230
+ L K +C A+ Y+ + HRD+ +N LV +G VS + SRY
Sbjct: 119 TQQLLEMCK----DVCEAMEYLES-KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173
Query: 231 -------------YRAPELIFGATEYTTAIDIWSTGCVMAEL 259
+ PE++ +++++ DIW+ G +M E+
Sbjct: 174 EYTSSVGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVLMWEI 214
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 110/304 (36%), Gaps = 82/304 (26%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIK---KVLQDKRYKNRELQ------IMQMLDHPNIVA 139
V+G+G+FG V++ GE V I K+L + ++ IM +DHP++V
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 104
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
L S T + + + I ++ L + QI + + Y+
Sbjct: 105 LLGVCLSPT----IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLN----WCVQIAKGMMYL 156
Query: 200 HNCIGICHRDIKPQNLLVKGEPNV---SYICSRYYRAPELIFGAT--------------- 241
+ HRD+ +N+LVK +V + +R E + A
Sbjct: 157 EER-RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 215
Query: 242 --EYTTAIDIWSTGCVMAELLL--GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 297
++T D+WS G + EL+ G+P G PTRE P+
Sbjct: 216 YRKFTHQSDVWSYGVTIWELMTFGGKPYD----------------GIPTRE-----IPDL 254
Query: 298 TEF--KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 355
E + PQ PP +C Y ++C ++A P F EL
Sbjct: 255 LEKGERLPQ--------------PP-----ICTIDVYMVMVKCWMIDADSRPKFKELAAE 295
Query: 356 NTRL 359
+R+
Sbjct: 296 FSRM 299
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/221 (18%), Positives = 86/221 (38%), Gaps = 32/221 (14%)
Query: 72 GGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQI 128
G + ++ +H +G G +G V++ ++ VA+K + +D +E +
Sbjct: 1 GSLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 60
Query: 129 MQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLY 188
M+ + HPN+V L + + R +R Q + + +
Sbjct: 61 MKEIKHPNLVQL----LGVCTREPPFYIIIEFMTYGNLLDYLRECNR--QEVSAVVLLYM 114
Query: 189 TYQICRALAYIHNCIGICHRDIKPQNLLV-----------------KGEPNVSYICSRY- 230
QI A+ Y+ HRD+ +N LV G+ ++ +++
Sbjct: 115 ATQISSAMEYLEK-KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 173
Query: 231 --YRAPELIFGATEYTTAIDIWSTGCVMAEL-LLGQPLFPG 268
+ APE + +++ D+W+ G ++ E+ G +PG
Sbjct: 174 IKWTAPESL-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 213
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 88/211 (41%), Gaps = 35/211 (16%)
Query: 72 GGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQI 128
GG + ++++ E +GTG FGVV K R + VAIK + + ++ E ++
Sbjct: 1 GGSWEIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAKV 57
Query: 129 MQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLY 188
M L H +V L + T + +N + R + L K
Sbjct: 58 MMNLSHEKLVQL---YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK-- 112
Query: 189 TYQICRALAYIHNCIGICHRDIKPQNLLV--KGEPNVS-YICSRY--------------- 230
+C A+ Y+ + HRD+ +N LV +G VS + SRY
Sbjct: 113 --DVCEAMEYLES-KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFP 169
Query: 231 --YRAPELIFGATEYTTAIDIWSTGCVMAEL 259
+ PE++ +++++ DIW+ G +M E+
Sbjct: 170 VRWSPPEVLM-YSKFSSKSDIWAFGVLMWEI 199
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 110/304 (36%), Gaps = 82/304 (26%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIK---KVLQDKRYKNRELQ------IMQMLDHPNIVA 139
V+G+G+FG V++ GE V I K+L + ++ IM +DHP++V
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
L S T + + + I ++ L + QI + + Y+
Sbjct: 82 LLGVCLSPT----IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLN----WCVQIAKGMMYL 133
Query: 200 HNCIGICHRDIKPQNLLVKGEPNV---SYICSRYYRAPELIFGAT--------------- 241
+ HRD+ +N+LVK +V + +R E + A
Sbjct: 134 EER-RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 192
Query: 242 --EYTTAIDIWSTGCVMAELLL--GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 297
++T D+WS G + EL+ G+P G PTRE P+
Sbjct: 193 YRKFTHQSDVWSYGVTIWELMTFGGKPYD----------------GIPTRE-----IPDL 231
Query: 298 TEF--KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 355
E + PQ PP +C Y ++C ++A P F EL
Sbjct: 232 LEKGERLPQ--------------PP-----ICTIDVYMVMVKCWMIDADSRPKFKELAAE 272
Query: 356 NTRL 359
+R+
Sbjct: 273 FSRM 276
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 19/93 (20%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLV---KGEPNV---------------SYICSR 229
+ +Q+ A+ + HN G+ HRDIK +N+L+ +GE + + +R
Sbjct: 115 FFWQVLEAVRHCHNX-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 173
Query: 230 YYRAPELIFGATEYTTAIDIWSTGCVMAELLLG 262
Y PE I + + +WS G ++ +++ G
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 80/193 (41%), Gaps = 33/193 (17%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPNIVALKHCFFS 146
+GTG FGVV K R + VAIK + + ++ E ++M L H +V L +
Sbjct: 23 LGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL---YGV 78
Query: 147 TTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGIC 206
T + +N + R + L K +C A+ Y+ +
Sbjct: 79 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK----DVCEAMEYLES-KQFL 133
Query: 207 HRDIKPQNLLV--KGEPNVS-YICSRY-----------------YRAPELIFGATEYTTA 246
HRD+ +N LV +G VS + SRY + PE++ +++++
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLM-YSKFSSK 192
Query: 247 IDIWSTGCVMAEL 259
DIW+ G +M E+
Sbjct: 193 SDIWAFGVLMWEI 205
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/225 (18%), Positives = 91/225 (40%), Gaps = 33/225 (14%)
Query: 80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPN 136
++ +H +G G +G V++ ++ VA+K + +D +E +M+ + HPN
Sbjct: 16 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 75
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
+V L + + R +R Q + + + QI A+
Sbjct: 76 LVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 129
Query: 197 AYIHNCIGICHRDIKPQNLLV-----------------KGEPNVSYICSRY---YRAPEL 236
Y+ HRD+ +N LV G+ ++ +++ + APE
Sbjct: 130 EYLEK-KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPES 188
Query: 237 IFGATEYTTAIDIWSTGCVMAEL-LLGQPLFPGESGVDQLVEIIK 280
+ +++ D+W+ G ++ E+ G +PG + Q+ E+++
Sbjct: 189 L-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE 231
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/225 (18%), Positives = 91/225 (40%), Gaps = 33/225 (14%)
Query: 80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPN 136
++ +H +G G +G V++ ++ VA+K + +D +E +M+ + HPN
Sbjct: 16 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 75
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
+V L + + R +R Q + + + QI A+
Sbjct: 76 LVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAM 129
Query: 197 AYIHNCIGICHRDIKPQNLLV-----------------KGEPNVSYICSRY---YRAPEL 236
Y+ HRD+ +N LV G+ ++ +++ + APE
Sbjct: 130 EYLEK-KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 188
Query: 237 IFGATEYTTAIDIWSTGCVMAEL-LLGQPLFPGESGVDQLVEIIK 280
+ +++ D+W+ G ++ E+ G +PG + Q+ E+++
Sbjct: 189 L-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE 231
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 80/193 (41%), Gaps = 33/193 (17%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPNIVALKHCFFS 146
+GTG FGVV K R + VAIK + + ++ E ++M L H +V L +
Sbjct: 16 LGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL---YGV 71
Query: 147 TTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGIC 206
T + +N + R + L K +C A+ Y+ +
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK----DVCEAMEYLES-KQFL 126
Query: 207 HRDIKPQNLLV--KGEPNVS-YICSRY-----------------YRAPELIFGATEYTTA 246
HRD+ +N LV +G VS + SRY + PE++ +++++
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLM-YSKFSSK 185
Query: 247 IDIWSTGCVMAEL 259
DIW+ G +M E+
Sbjct: 186 SDIWAFGVLMWEI 198
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 80/193 (41%), Gaps = 33/193 (17%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPNIVALKHCFFS 146
+GTG FGVV K R + VAIK + + ++ E ++M L H +V L +
Sbjct: 17 LGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL---YGV 72
Query: 147 TTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGIC 206
T + +N + R + L K +C A+ Y+ +
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK----DVCEAMEYLES-KQFL 127
Query: 207 HRDIKPQNLLV--KGEPNVS-YICSRY-----------------YRAPELIFGATEYTTA 246
HRD+ +N LV +G VS + SRY + PE++ +++++
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLM-YSKFSSK 186
Query: 247 IDIWSTGCVMAEL 259
DIW+ G +M E+
Sbjct: 187 SDIWAFGVLMWEI 199
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/225 (18%), Positives = 91/225 (40%), Gaps = 33/225 (14%)
Query: 80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPN 136
++ +H +G G +G V++ ++ VA+K + +D +E +M+ + HPN
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 70
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
+V L + + R +R Q + + + QI A+
Sbjct: 71 LVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAM 124
Query: 197 AYIHNCIGICHRDIKPQNLLV-----------------KGEPNVSYICSRY---YRAPEL 236
Y+ HRD+ +N LV G+ ++ +++ + APE
Sbjct: 125 EYLEK-KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 183
Query: 237 IFGATEYTTAIDIWSTGCVMAEL-LLGQPLFPGESGVDQLVEIIK 280
+ +++ D+W+ G ++ E+ G +PG + Q+ E+++
Sbjct: 184 L-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE 226
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 82/215 (38%), Gaps = 45/215 (20%)
Query: 87 EHVVGTGSFGVVFQAKCRETGEIVAIKK-VLQDKRYKN----------RELQIMQMLDHP 135
E +G G FG+V + + + +VAIK +L D + RE+ IM L+HP
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 136 NIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRA 195
NIV L + + +++ + R+ L I
Sbjct: 84 NIVKL-YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLML--------DIALG 134
Query: 196 LAYIHN-CIGICHRDIKPQNLLVKGEPNVSYICSRY---------------------YRA 233
+ Y+ N I HRD++ N+ ++ + +C++ + A
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMA 194
Query: 234 PELIFGATE--YTTAIDIWSTGCVMAELLLGQPLF 266
PE I GA E YT D +S ++ +L G+ F
Sbjct: 195 PETI-GAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 80/193 (41%), Gaps = 33/193 (17%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPNIVALKHCFFS 146
+GTG FGVV K R + VAIK + + ++ E ++M L H +V L +
Sbjct: 12 LGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL---YGV 67
Query: 147 TTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIGIC 206
T + +N + R + L K +C A+ Y+ +
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK----DVCEAMEYLES-KQFL 122
Query: 207 HRDIKPQNLLV--KGEPNVS-YICSRY-----------------YRAPELIFGATEYTTA 246
HRD+ +N LV +G VS + SRY + PE++ +++++
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLM-YSKFSSK 181
Query: 247 IDIWSTGCVMAEL 259
DIW+ G +M E+
Sbjct: 182 SDIWAFGVLMWEI 194
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/225 (18%), Positives = 91/225 (40%), Gaps = 33/225 (14%)
Query: 80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPN 136
++ +H +G G +G V++ ++ VA+K + +D +E +M+ + HPN
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 70
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
+V L + + R +R Q + + + QI A+
Sbjct: 71 LVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAM 124
Query: 197 AYIHNCIGICHRDIKPQNLLV-----------------KGEPNVSYICSRY---YRAPEL 236
Y+ HRD+ +N LV G+ ++ +++ + APE
Sbjct: 125 EYLEK-KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 183
Query: 237 IFGATEYTTAIDIWSTGCVMAEL-LLGQPLFPGESGVDQLVEIIK 280
+ +++ D+W+ G ++ E+ G +PG + Q+ E+++
Sbjct: 184 L-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE 226
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 92/220 (41%), Gaps = 43/220 (19%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV-------LQDKRYKNRELQIMQMLDHPNIVALKH 142
+G+GSFG V++ K VA+K + Q + +KN E+ +++ H NI+
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 95
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F + K + + + I + +I + Q + + Y+H
Sbjct: 96 LFMGYSTKPQLAIVTQWCEG----SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH-A 150
Query: 203 IGICHRDIKPQNLLVK-------GEPNVSYICSRY--------------YRAPELIFGAT 241
I HRD+K N+ + G+ ++ SR+ + APE+I
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 242 E--YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEII 279
+ Y+ D+++ G V+ EL+ GQ + + DQ++ ++
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/213 (18%), Positives = 84/213 (39%), Gaps = 32/213 (15%)
Query: 80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPN 136
++ +H +G G +G V++ ++ VA+K + +D +E +M+ + HPN
Sbjct: 9 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 68
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
+V L + + R +R Q + + + QI A+
Sbjct: 69 LVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAM 122
Query: 197 AYIHNCIGICHRDIKPQNLLV-----------------KGEPNVSYICSRY---YRAPEL 236
Y+ HRD+ +N LV G+ ++ +++ + APE
Sbjct: 123 EYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPES 181
Query: 237 IFGATEYTTAIDIWSTGCVMAEL-LLGQPLFPG 268
+ +++ D+W+ G ++ E+ G +PG
Sbjct: 182 L-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 213
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 82/215 (38%), Gaps = 45/215 (20%)
Query: 87 EHVVGTGSFGVVFQAKCRETGEIVAIKK-VLQDKRYKN----------RELQIMQMLDHP 135
E +G G FG+V + + + +VAIK +L D + RE+ IM L+HP
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 136 NIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRA 195
NIV L + + +++ + R+ L I
Sbjct: 84 NIVKL-YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLML--------DIALG 134
Query: 196 LAYIHN-CIGICHRDIKPQNLLVKGEPNVSYICSRY---------------------YRA 233
+ Y+ N I HRD++ N+ ++ + +C++ + A
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMA 194
Query: 234 PELIFGATE--YTTAIDIWSTGCVMAELLLGQPLF 266
PE I GA E YT D +S ++ +L G+ F
Sbjct: 195 PETI-GAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 82/215 (38%), Gaps = 45/215 (20%)
Query: 87 EHVVGTGSFGVVFQAKCRETGEIVAIKK-VLQDKRYKN----------RELQIMQMLDHP 135
E +G G FG+V + + + +VAIK +L D + RE+ IM L+HP
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 136 NIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRA 195
NIV L + + +++ + R+ L I
Sbjct: 84 NIVKL-YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLML--------DIALG 134
Query: 196 LAYIHN-CIGICHRDIKPQNLLVKGEPNVSYICSRY---------------------YRA 233
+ Y+ N I HRD++ N+ ++ + +C++ + A
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMA 194
Query: 234 PELIFGATE--YTTAIDIWSTGCVMAELLLGQPLF 266
PE I GA E YT D +S ++ +L G+ F
Sbjct: 195 PETI-GAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/225 (18%), Positives = 91/225 (40%), Gaps = 33/225 (14%)
Query: 80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPN 136
++ +H +G G +G V++ ++ VA+K + +D +E +M+ + HPN
Sbjct: 16 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 75
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
+V L + + R +R Q + + + QI A+
Sbjct: 76 LVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 129
Query: 197 AYIHNCIGICHRDIKPQNLLV-----------------KGEPNVSYICSRY---YRAPEL 236
Y+ HRD+ +N LV G+ ++ +++ + APE
Sbjct: 130 EYLEK-KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 188
Query: 237 IFGATEYTTAIDIWSTGCVMAEL-LLGQPLFPGESGVDQLVEIIK 280
+ +++ D+W+ G ++ E+ G +PG + Q+ E+++
Sbjct: 189 L-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE 231
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/225 (18%), Positives = 91/225 (40%), Gaps = 33/225 (14%)
Query: 80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPN 136
++ +H +G G +G V++ ++ VA+K + +D +E +M+ + HPN
Sbjct: 15 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 74
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
+V L + + R +R Q + + + QI A+
Sbjct: 75 LVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 128
Query: 197 AYIHNCIGICHRDIKPQNLLV-----------------KGEPNVSYICSRY---YRAPEL 236
Y+ HRD+ +N LV G+ ++ +++ + APE
Sbjct: 129 EYLEK-KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 187
Query: 237 IFGATEYTTAIDIWSTGCVMAEL-LLGQPLFPGESGVDQLVEIIK 280
+ +++ D+W+ G ++ E+ G +PG + Q+ E+++
Sbjct: 188 L-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE 230
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/225 (18%), Positives = 91/225 (40%), Gaps = 33/225 (14%)
Query: 80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPN 136
++ +H +G G +G V++ ++ VA+K + +D +E +M+ + HPN
Sbjct: 12 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 71
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
+V L + + R +R Q + + + QI A+
Sbjct: 72 LVQL----LGVCTREPPFYIIIEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 125
Query: 197 AYIHNCIGICHRDIKPQNLLV-----------------KGEPNVSYICSRY---YRAPEL 236
Y+ HRD+ +N LV G+ ++ +++ + APE
Sbjct: 126 EYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPES 184
Query: 237 IFGATEYTTAIDIWSTGCVMAEL-LLGQPLFPGESGVDQLVEIIK 280
+ +++ D+W+ G ++ E+ G +PG + Q+ E+++
Sbjct: 185 L-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE 227
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 92/220 (41%), Gaps = 43/220 (19%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV-------LQDKRYKNRELQIMQMLDHPNIVALKH 142
+G+GSFG V++ K VA+K + Q + +KN E+ +++ H NI+
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 67
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F + K + + + I + +I + Q + + Y+H
Sbjct: 68 LFMGYSTKPQLAIVTQWCEG----SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH-A 122
Query: 203 IGICHRDIKPQNLLVK-------GEPNVSYICSRY--------------YRAPELIFGAT 241
I HRD+K N+ + G+ ++ SR+ + APE+I
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 242 E--YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEII 279
+ Y+ D+++ G V+ EL+ GQ + + DQ++ ++
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 92/220 (41%), Gaps = 43/220 (19%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKV-------LQDKRYKNRELQIMQMLDHPNIVALKH 142
+G+GSFG V++ K VA+K + Q + +KN E+ +++ H NI+
Sbjct: 36 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 87
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
F + K + + + I + +I + Q + + Y+H
Sbjct: 88 LFMGYSTKPQLAIVTQWCEG----SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH-A 142
Query: 203 IGICHRDIKPQNLLVK-------GEPNVSYICSRY--------------YRAPELIFGAT 241
I HRD+K N+ + G+ ++ SR+ + APE+I
Sbjct: 143 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 202
Query: 242 E--YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEII 279
+ Y+ D+++ G V+ EL+ GQ + + DQ++ ++
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 242
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/225 (18%), Positives = 91/225 (40%), Gaps = 33/225 (14%)
Query: 80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPN 136
++ +H +G G +G V++ ++ VA+K + +D +E +M+ + HPN
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 70
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
+V L + + R +R Q + + + QI A+
Sbjct: 71 LVQL----LGVCTREPPFYIIIEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAM 124
Query: 197 AYIHNCIGICHRDIKPQNLLV-----------------KGEPNVSYICSRY---YRAPEL 236
Y+ HRD+ +N LV G+ ++ +++ + APE
Sbjct: 125 EYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 183
Query: 237 IFGATEYTTAIDIWSTGCVMAEL-LLGQPLFPGESGVDQLVEIIK 280
+ +++ D+W+ G ++ E+ G +PG + Q+ E+++
Sbjct: 184 L-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE 226
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/225 (18%), Positives = 91/225 (40%), Gaps = 33/225 (14%)
Query: 80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPN 136
++ +H +G G +G V++ ++ VA+K + +D +E +M+ + HPN
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 70
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
+V L + + R +R Q + + + QI A+
Sbjct: 71 LVQL----LGVCTREPPFYIIIEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAM 124
Query: 197 AYIHNCIGICHRDIKPQNLLV-----------------KGEPNVSYICSRY---YRAPEL 236
Y+ HRD+ +N LV G+ ++ +++ + APE
Sbjct: 125 EYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 183
Query: 237 IFGATEYTTAIDIWSTGCVMAEL-LLGQPLFPGESGVDQLVEIIK 280
+ +++ D+W+ G ++ E+ G +PG + Q+ E+++
Sbjct: 184 L-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE 226
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 87/225 (38%), Gaps = 53/225 (23%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVL----------QDKRYKNRELQIMQML-DHPNI 137
+G G+FG V +A G+ A+ KV +K EL+IM L H NI
Sbjct: 53 TLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 138 VALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVK----------L 187
V L + T +N + R SR+ + P +
Sbjct: 113 VNL---LGACTHGGPVLVITEYCCYGDLLNFLRRK-SRVLETDPAFAIANSTLSTRDLLH 168
Query: 188 YTYQICRALAYI--HNCIGICHRDIKPQNLLVKGE---------------PNVSYICSRY 230
++ Q+ + +A++ NCI HRD+ +N+L+ + +YI
Sbjct: 169 FSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 231 YR------APELIFGATEYTTAIDIWSTGCVMAELL-LGQPLFPG 268
R APE IF YT D+WS G ++ E+ LG +PG
Sbjct: 226 ARLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 269
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/225 (18%), Positives = 91/225 (40%), Gaps = 33/225 (14%)
Query: 80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPN 136
++ +H +G G +G V++ ++ VA+K + +D +E +M+ + HPN
Sbjct: 13 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 72
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
+V L + + R +R Q + + + QI A+
Sbjct: 73 LVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 126
Query: 197 AYIHNCIGICHRDIKPQNLLV-----------------KGEPNVSYICSRY---YRAPEL 236
Y+ HRD+ +N LV G+ ++ +++ + APE
Sbjct: 127 EYLEK-KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 185
Query: 237 IFGATEYTTAIDIWSTGCVMAEL-LLGQPLFPGESGVDQLVEIIK 280
+ +++ D+W+ G ++ E+ G +PG + Q+ E+++
Sbjct: 186 L-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE 228
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/225 (18%), Positives = 91/225 (40%), Gaps = 33/225 (14%)
Query: 80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPN 136
++ +H +G G +G V++ ++ VA+K + +D +E +M+ + HPN
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 70
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
+V L + + R +R Q + + + QI A+
Sbjct: 71 LVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 124
Query: 197 AYIHNCIGICHRDIKPQNLLV-----------------KGEPNVSYICSRY---YRAPEL 236
Y+ HRD+ +N LV G+ ++ +++ + APE
Sbjct: 125 EYLEK-KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 183
Query: 237 IFGATEYTTAIDIWSTGCVMAEL-LLGQPLFPGESGVDQLVEIIK 280
+ +++ D+W+ G ++ E+ G +PG + Q+ E+++
Sbjct: 184 L-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE 226
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/225 (18%), Positives = 91/225 (40%), Gaps = 33/225 (14%)
Query: 80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPN 136
++ +H +G G +G V++ ++ VA+K + +D +E +M+ + HPN
Sbjct: 13 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 72
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
+V L + + R +R Q + + + QI A+
Sbjct: 73 LVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 126
Query: 197 AYIHNCIGICHRDIKPQNLLV-----------------KGEPNVSYICSRY---YRAPEL 236
Y+ HRD+ +N LV G+ ++ +++ + APE
Sbjct: 127 EYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 185
Query: 237 IFGATEYTTAIDIWSTGCVMAEL-LLGQPLFPGESGVDQLVEIIK 280
+ +++ D+W+ G ++ E+ G +PG + Q+ E+++
Sbjct: 186 L-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE 228
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 87/225 (38%), Gaps = 53/225 (23%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVL----------QDKRYKNRELQIMQML-DHPNI 137
+G G+FG V +A G+ A+ KV +K EL+IM L H NI
Sbjct: 53 TLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 138 VALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVK----------L 187
V L + T +N + R SR+ + P +
Sbjct: 113 VNL---LGACTHGGPVLVITEYCCYGDLLNFLRRK-SRVLETDPAFAIANSTASTRDLLH 168
Query: 188 YTYQICRALAYI--HNCIGICHRDIKPQNLLVKGE---------------PNVSYICSRY 230
++ Q+ + +A++ NCI HRD+ +N+L+ + +YI
Sbjct: 169 FSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 231 YR------APELIFGATEYTTAIDIWSTGCVMAELL-LGQPLFPG 268
R APE IF YT D+WS G ++ E+ LG +PG
Sbjct: 226 ARLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 269
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/213 (18%), Positives = 84/213 (39%), Gaps = 32/213 (15%)
Query: 80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPN 136
++ +H +G G +G V++ ++ VA+K + +D +E +M+ + HPN
Sbjct: 16 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 75
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
+V L + + R +R Q + + + QI A+
Sbjct: 76 LVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 129
Query: 197 AYIHNCIGICHRDIKPQNLLV-----------------KGEPNVSYICSRY---YRAPEL 236
Y+ HRD+ +N LV G+ ++ +++ + APE
Sbjct: 130 EYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 188
Query: 237 IFGATEYTTAIDIWSTGCVMAEL-LLGQPLFPG 268
+ +++ D+W+ G ++ E+ G +PG
Sbjct: 189 L-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 84/206 (40%), Gaps = 48/206 (23%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNREL----QIMQMLDHPNIVA 139
V+G+G+FG V++ GE V I +++ R N+E+ +M +D+P++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAY 198
L ++T + +Y R H+ + Y+ + QI + + Y
Sbjct: 84 LLGICLTSTVQLITQLMPFGCLL---------DYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNVSYICSRYYRAPELIFGATE---------------- 242
+ + + HRD+ +N+LVK +V + + RA + GA E
Sbjct: 135 LEDR-RLVHRDLAARNVLVKTPQHVK--ITDFGRAK--LLGAEEKEYHAEGGKVPIKWMA 189
Query: 243 --------YTTAIDIWSTGCVMAELL 260
YT D+WS G + EL+
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELM 215
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/225 (18%), Positives = 91/225 (40%), Gaps = 33/225 (14%)
Query: 80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPN 136
++ +H +G G +G V++ ++ VA+K + +D +E +M+ + HPN
Sbjct: 16 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 75
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
+V L + + R +R Q + + + QI A+
Sbjct: 76 LVQL----LGVCTREPPFYIIIEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 129
Query: 197 AYIHNCIGICHRDIKPQNLLV-----------------KGEPNVSYICSRY---YRAPEL 236
Y+ HRD+ +N LV G+ ++ +++ + APE
Sbjct: 130 EYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 188
Query: 237 IFGATEYTTAIDIWSTGCVMAEL-LLGQPLFPGESGVDQLVEIIK 280
+ +++ D+W+ G ++ E+ G +PG + Q+ E+++
Sbjct: 189 L-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE 231
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 93/219 (42%), Gaps = 41/219 (18%)
Query: 90 VGTGSFGVVFQAKCRETGEI-VAIKKVL-----QDKRYKNRELQIMQMLDHPNIVALKHC 143
+G+GSFG V++ K G++ V I KV+ Q + ++N E+ +++ H NI+
Sbjct: 44 IGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRN-EVAVLRKTRHVNIL----L 96
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
F K + ++ Q LI + Q + + Y+H
Sbjct: 97 FMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKF-QMFQLIDI---ARQTAQGMDYLH-AK 151
Query: 204 GICHRDIKPQNLLVK-------GEPNVSYICSRY--------------YRAPELIFGATE 242
I HRD+K N+ + G+ ++ + SR+ + APE+I
Sbjct: 152 NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDN 211
Query: 243 --YTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEII 279
++ D++S G V+ EL+ G+ + + DQ++ ++
Sbjct: 212 NPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMV 250
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 84/206 (40%), Gaps = 48/206 (23%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNREL----QIMQMLDHPNIVA 139
V+G+G+FG V++ GE V I +++ R N+E+ +M +D+P++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAY 198
L ++T + +Y R H+ + Y+ + QI + + Y
Sbjct: 84 LLGICLTSTVQLIMQLMPFGCLL---------DYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNVSYICSRYYRAPELIFGATE---------------- 242
+ + + HRD+ +N+LVK +V + + RA + GA E
Sbjct: 135 LEDR-RLVHRDLAARNVLVKTPQHVK--ITDFGRAK--LLGAEEKEYHAEGGKVPIKWMA 189
Query: 243 --------YTTAIDIWSTGCVMAELL 260
YT D+WS G + EL+
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELM 215
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/225 (18%), Positives = 91/225 (40%), Gaps = 33/225 (14%)
Query: 80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPN 136
++ +H +G G +G V++ ++ VA+K + +D +E +M+ + HPN
Sbjct: 24 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 83
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
+V L + + R +R Q + + + QI A+
Sbjct: 84 LVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 137
Query: 197 AYIHNCIGICHRDIKPQNLLV-----------------KGEPNVSYICSRY---YRAPEL 236
Y+ HRD+ +N LV G+ ++ +++ + APE
Sbjct: 138 EYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 196
Query: 237 IFGATEYTTAIDIWSTGCVMAEL-LLGQPLFPGESGVDQLVEIIK 280
+ +++ D+W+ G ++ E+ G +PG + Q+ E+++
Sbjct: 197 L-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE 239
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 80/208 (38%), Gaps = 44/208 (21%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKV-LQDKRYKNRELQIMQM--LDHPNIVALKHCFF 145
V G FG V++A+ E VA+K +QDK+ E ++ + + H NI+
Sbjct: 31 VKARGRFGCVWKAQL--LNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEK 88
Query: 146 STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI-- 203
T +++ + + + L ++ + R LAY+H I
Sbjct: 89 RGTSVDVDLWLITAFHEKGSLSDFLK--ANVVSWNELCHI---AETMARGLAYLHEDIPG 143
Query: 204 -------GICHRDIKPQNLLVKGEPNV---------------------SYICSRYYRAPE 235
I HRDIK +N+L+K + +R Y APE
Sbjct: 144 LKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE 203
Query: 236 LIFGATEYT----TAIDIWSTGCVMAEL 259
++ GA + ID+++ G V+ EL
Sbjct: 204 VLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/225 (18%), Positives = 91/225 (40%), Gaps = 33/225 (14%)
Query: 80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPN 136
++ +H +G G +G V++ ++ VA+K + +D +E +M+ + HPN
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 70
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
+V L + + R +R Q + + + QI A+
Sbjct: 71 LVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 124
Query: 197 AYIHNCIGICHRDIKPQNLLV-----------------KGEPNVSYICSRY---YRAPEL 236
Y+ HRD+ +N LV G+ ++ +++ + APE
Sbjct: 125 EYLEK-KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 183
Query: 237 IFGATEYTTAIDIWSTGCVMAEL-LLGQPLFPGESGVDQLVEIIK 280
+ +++ D+W+ G ++ E+ G +PG + Q+ E+++
Sbjct: 184 L-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE 226
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 84/206 (40%), Gaps = 48/206 (23%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNREL----QIMQMLDHPNIVA 139
V+G+G+FG V++ GE V I +++ R N+E+ +M +D+P++
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAY 198
L ++T + +Y R H+ + Y+ + QI + + Y
Sbjct: 86 LLGICLTSTVQLIMQLMPFGCLL---------DYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNVSYICSRYYRAPELIFGATE---------------- 242
+ + + HRD+ +N+LVK +V + + RA + GA E
Sbjct: 137 LEDR-RLVHRDLAARNVLVKTPQHVK--ITDFGRAK--LLGAEEKEYHAEGGKVPIKWMA 191
Query: 243 --------YTTAIDIWSTGCVMAELL 260
YT D+WS G + EL+
Sbjct: 192 LESILHRIYTHQSDVWSYGVTVWELM 217
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 84/206 (40%), Gaps = 48/206 (23%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNREL----QIMQMLDHPNIVA 139
V+G+G+FG V++ GE V I +++ R N+E+ +M +D+P++
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAY 198
L ++T + +Y R H+ + Y+ + QI + + Y
Sbjct: 89 LLGICLTSTVQLITQLMPFGCLL---------DYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNVSYICSRYYRAPELIFGATE---------------- 242
+ + + HRD+ +N+LVK +V + + RA + GA E
Sbjct: 140 LEDR-RLVHRDLAARNVLVKTPQHVK--ITDFGRAK--LLGAEEKEYHAEGGKVPIKWMA 194
Query: 243 --------YTTAIDIWSTGCVMAELL 260
YT D+WS G + EL+
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELM 220
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 84/206 (40%), Gaps = 48/206 (23%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNREL----QIMQMLDHPNIVA 139
V+G+G+FG V++ GE V I +++ R N+E+ +M +D+P++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAY 198
L ++T + +Y R H+ + Y+ + QI + + Y
Sbjct: 82 LLGICLTSTVQLITQLMPFGCLL---------DYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNVSYICSRYYRAPELIFGATE---------------- 242
+ + + HRD+ +N+LVK +V + + RA + GA E
Sbjct: 133 LEDR-RLVHRDLAARNVLVKTPQHVK--ITDFGRAK--LLGAEEKEYHAEGGKVPIKWMA 187
Query: 243 --------YTTAIDIWSTGCVMAELL 260
YT D+WS G + EL+
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 78/205 (38%), Gaps = 39/205 (19%)
Query: 85 IAEHVVGTGSFGVVFQA--KCRETGEIVAIKKVLQ-----DKRYKNRELQIMQMLDHPNI 137
IA+ +G G+FG V Q + R+ VAIK + Q D RE QIM LD+P I
Sbjct: 13 IADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYI 72
Query: 138 VALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
V L + V + + +P+ V +Q+ +
Sbjct: 73 VRLIGVCQAEALMLVMEMAGGGPLHKFLVGK--------REEIPVSNVAELLHQVSMGMK 124
Query: 198 YIHNCIGICHRDIKPQNLLVKGE---------------PNVSYICSRY-------YRAPE 235
Y+ HRD+ +N+L+ + SY +R + APE
Sbjct: 125 YLEE-KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE 183
Query: 236 LIFGATEYTTAIDIWSTGCVMAELL 260
I ++++ D+WS G M E L
Sbjct: 184 CI-NFRKFSSRSDVWSYGVTMWEAL 207
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 84/206 (40%), Gaps = 48/206 (23%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNREL----QIMQMLDHPNIVA 139
V+G+G+FG V++ GE V I +++ R N+E+ +M +D+P++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAY 198
L ++T + +Y R H+ + Y+ + QI + + Y
Sbjct: 84 LLGICLTSTVQLIMQLMPFGCLL---------DYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNVSYICSRYYRAPELIFGATE---------------- 242
+ + + HRD+ +N+LVK +V + + RA + GA E
Sbjct: 135 LEDR-RLVHRDLAARNVLVKTPQHVK--ITDFGRAK--LLGAEEKEYHAEGGKVPIKWMA 189
Query: 243 --------YTTAIDIWSTGCVMAELL 260
YT D+WS G + EL+
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELM 215
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 84/212 (39%), Gaps = 39/212 (18%)
Query: 80 QKVSYIAEHVVGTGSFGVVF------QAKCRETGEIVAIKKVLQDKRYKN--RELQIMQM 131
++V ++ V+G G FGVV+ QA+ R I ++ ++ + ++ + RE +M+
Sbjct: 19 ERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRG 78
Query: 132 LDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKL-YTY 190
L+HPN++AL + + R QR P + + +
Sbjct: 79 LNHPNVLALIGIMLPPEG-------LPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGL 131
Query: 191 QICRALAYIHNCIGICHRDIKPQNLLVKGEPNV--------------SYICSRYYRAPEL 236
Q+ R + Y+ HRD+ +N ++ V Y + +R L
Sbjct: 132 QVARGMEYLAEQ-KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL 190
Query: 237 IFGAT--------EYTTAIDIWSTGCVMAELL 260
T +TT D+WS G ++ ELL
Sbjct: 191 PVKWTALESLQTYRFTTKSDVWSFGVLLWELL 222
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 81/209 (38%), Gaps = 38/209 (18%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQ----DKRYKN-RELQIMQMLDHPNIVALKHCF 144
+G G+FG VF + R +VA+K + D + K +E +I++ HPNIV L
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL---I 178
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN--C 202
T K + + +R+ + L V + Y+ + C
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVG----DAAAGMEYLESKCC 234
Query: 203 IGICHRDIKPQNLLV--------------KGEPNVSYICSRYYRAPELIFGATE------ 242
I HRD+ +N LV + E + Y S R + + A E
Sbjct: 235 I---HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGR 291
Query: 243 YTTAIDIWSTGCVMAELL-LGQPLFPGES 270
Y++ D+WS G ++ E LG +P S
Sbjct: 292 YSSESDVWSFGILLWETFSLGASPYPNLS 320
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 84/202 (41%), Gaps = 40/202 (19%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNREL----QIMQMLDHPNIVA 139
V+G+G+FG V++ GE V I +++ R N+E+ +M +D+P++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAY 198
L ++T + +Y R H+ + Y+ + QI + + Y
Sbjct: 82 LLGICLTSTVQLITQLMPFGXLL---------DYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSRYYRAPELIFGATE------------- 242
+ + + HRD+ +N+LVK +V + ++ A E + A
Sbjct: 133 LEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 243 ----YTTAIDIWSTGCVMAELL 260
YT D+WS G + EL+
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELM 213
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 186 KLYTYQICRALAYIHNCIGICHRDIKPQNLLVK------------------GEPNVSYIC 227
+ + Q+ A+ + H+ G+ HRDIK +N+L+ EP +
Sbjct: 142 RCFFGQVVAAIQHCHS-RGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDG 200
Query: 228 SRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLG 262
+R Y PE I + +WS G ++ +++ G
Sbjct: 201 TRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 81/217 (37%), Gaps = 41/217 (18%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVL----------QDKRYKNRELQIMQML-DHPNI 137
+G G+FG V +A G+ A+ KV +K EL+IM L H NI
Sbjct: 53 TLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 138 VALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKL--YTYQICRA 195
V L + R A PL L ++ Q+ +
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQG 172
Query: 196 LAYI--HNCIGICHRDIKPQNLLVKGE---------------PNVSYICSRYYR------ 232
+A++ NCI HRD+ +N+L+ + +YI R
Sbjct: 173 MAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 229
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELL-LGQPLFPG 268
APE IF YT D+WS G ++ E+ LG +PG
Sbjct: 230 APESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 265
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 81/217 (37%), Gaps = 41/217 (18%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVL----------QDKRYKNRELQIMQML-DHPNI 137
+G G+FG V +A G+ A+ KV +K EL+IM L H NI
Sbjct: 45 TLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI 104
Query: 138 VALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKL--YTYQICRA 195
V L + R A PL L ++ Q+ +
Sbjct: 105 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQG 164
Query: 196 LAYI--HNCIGICHRDIKPQNLLVKGE---------------PNVSYICSRYYR------ 232
+A++ NCI HRD+ +N+L+ + +YI R
Sbjct: 165 MAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 221
Query: 233 APELIFGATEYTTAIDIWSTGCVMAELL-LGQPLFPG 268
APE IF YT D+WS G ++ E+ LG +PG
Sbjct: 222 APESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 257
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 41/225 (18%), Positives = 91/225 (40%), Gaps = 33/225 (14%)
Query: 80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPN 136
++ +H +G G +G V++ ++ VA+K + +D +E +M+ + HPN
Sbjct: 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 277
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
+V L + + R +R Q + + + QI A+
Sbjct: 278 LVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAM 331
Query: 197 AYIHNCIGICHRDIKPQNLLV-----------------KGEPNVSYICSRY---YRAPEL 236
Y+ HR++ +N LV G+ ++ +++ + APE
Sbjct: 332 EYLEKK-NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 390
Query: 237 IFGATEYTTAIDIWSTGCVMAEL-LLGQPLFPGESGVDQLVEIIK 280
+ +++ D+W+ G ++ E+ G +PG + Q+ E+++
Sbjct: 391 L-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE 433
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 84/202 (41%), Gaps = 40/202 (19%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNREL----QIMQMLDHPNIVA 139
V+G+G+FG V++ GE V I +++ R N+E+ +M +D+P++
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAY 198
L ++T + +Y R H+ + Y+ + QI + + Y
Sbjct: 83 LLGICLTSTVQLIMQLMPFGXLL---------DYVREHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSRYYRAPELIFGATE------------- 242
+ + + HRD+ +N+LVK +V + ++ A E + A
Sbjct: 134 LEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 243 ----YTTAIDIWSTGCVMAELL 260
YT D+WS G + EL+
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELM 214
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 78/205 (38%), Gaps = 39/205 (19%)
Query: 85 IAEHVVGTGSFGVVFQA--KCRETGEIVAIKKVLQ-----DKRYKNRELQIMQMLDHPNI 137
IA+ +G G+FG V Q + R+ VAIK + Q D RE QIM LD+P I
Sbjct: 339 IADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYI 398
Query: 138 VALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
V L + V + + +P+ V +Q+ +
Sbjct: 399 VRLIGVCQAEALMLVMEMAGGGPLHKFLVGK--------REEIPVSNVAELLHQVSMGMK 450
Query: 198 YIHNCIGICHRDIKPQNLLVKGE---------------PNVSYICSRY-------YRAPE 235
Y+ HR++ +N+L+ + SY +R + APE
Sbjct: 451 YLEE-KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE 509
Query: 236 LIFGATEYTTAIDIWSTGCVMAELL 260
I ++++ D+WS G M E L
Sbjct: 510 CI-NFRKFSSRSDVWSYGVTMWEAL 533
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 41/225 (18%), Positives = 91/225 (40%), Gaps = 33/225 (14%)
Query: 80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPN 136
++ +H +G G +G V++ ++ VA+K + +D +E +M+ + HPN
Sbjct: 257 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 316
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
+V L + + R +R Q + + + QI A+
Sbjct: 317 LVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 370
Query: 197 AYIHNCIGICHRDIKPQNLLV-----------------KGEPNVSYICSRY---YRAPEL 236
Y+ HR++ +N LV G+ ++ +++ + APE
Sbjct: 371 EYLEKK-NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 429
Query: 237 IFGATEYTTAIDIWSTGCVMAEL-LLGQPLFPGESGVDQLVEIIK 280
+ +++ D+W+ G ++ E+ G +PG + Q+ E+++
Sbjct: 430 L-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE 472
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 35.0 bits (79), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 83/202 (41%), Gaps = 40/202 (19%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNREL----QIMQMLDHPNIVA 139
V+G+G+FG V++ GE V I +++ R N+E+ +M +D+P++
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAY 198
L ++T + +Y R H+ + Y+ + QI + + Y
Sbjct: 86 LLGICLTSTVQLIMQLMPFGCLL---------DYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSRYYRAPELIFGATE------------- 242
+ + + HRD+ +N+LVK +V + ++ A E + A
Sbjct: 137 LEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 243 ----YTTAIDIWSTGCVMAELL 260
YT D+WS G + EL+
Sbjct: 196 LHRIYTHQSDVWSYGVTVWELM 217
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 35.0 bits (79), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 83/202 (41%), Gaps = 40/202 (19%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNREL----QIMQMLDHPNIVA 139
V+G+G+FG V++ GE V I +++ R N+E+ +M +D+P++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAY 198
L ++T + +Y R H+ + Y+ + QI + + Y
Sbjct: 82 LLGICLTSTVQLIMQLMPFGCLL---------DYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSRYYRAPELIFGATE------------- 242
+ + + HRD+ +N+LVK +V + ++ A E + A
Sbjct: 133 LEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 243 ----YTTAIDIWSTGCVMAELL 260
YT D+WS G + EL+
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELM 213
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 35.0 bits (79), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 83/202 (41%), Gaps = 40/202 (19%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNREL----QIMQMLDHPNIVA 139
V+G+G+FG V++ GE V I +++ R N+E+ +M +D+P++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAY 198
L ++T + +Y R H+ + Y+ + QI + + Y
Sbjct: 82 LLGICLTSTVQLITQLMPFGCLL---------DYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSRYYRAPELIFGATE------------- 242
+ + + HRD+ +N+LVK +V + ++ A E + A
Sbjct: 133 LEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 243 ----YTTAIDIWSTGCVMAELL 260
YT D+WS G + EL+
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELM 213
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 35.0 bits (79), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 83/202 (41%), Gaps = 40/202 (19%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNREL----QIMQMLDHPNIVA 139
V+G+G+FG V++ GE V I +++ R N+E+ +M +D+P++
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAY 198
L ++T + +Y R H+ + Y+ + QI + + Y
Sbjct: 83 LLGICLTSTVQLIMQLMPFGCLL---------DYVREHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSRYYRAPELIFGATE------------- 242
+ + + HRD+ +N+LVK +V + ++ A E + A
Sbjct: 134 LEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 243 ----YTTAIDIWSTGCVMAELL 260
YT D+WS G + EL+
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELM 214
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 35.0 bits (79), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 83/202 (41%), Gaps = 40/202 (19%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNREL----QIMQMLDHPNIVA 139
V+G+G+FG V++ GE V I +++ R N+E+ +M +D+P++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAY 198
L ++T + +Y R H+ + Y+ + QI + + Y
Sbjct: 84 LLGICLTSTVQLITQLMPFGCLL---------DYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSRYYRAPELIFGATE------------- 242
+ + + HRD+ +N+LVK +V + ++ A E + A
Sbjct: 135 LEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 243 ----YTTAIDIWSTGCVMAELL 260
YT D+WS G + EL+
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELM 215
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 35.0 bits (79), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 83/202 (41%), Gaps = 40/202 (19%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNREL----QIMQMLDHPNIVA 139
V+G+G+FG V++ GE V I +++ R N+E+ +M +D+P++
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAY 198
L ++T + +Y R H+ + Y+ + QI + + Y
Sbjct: 85 LLGICLTSTVQLITQLMPFGCLL---------DYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSRYYRAPELIFGATE------------- 242
+ + + HRD+ +N+LVK +V + ++ A E + A
Sbjct: 136 LEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 243 ----YTTAIDIWSTGCVMAELL 260
YT D+WS G + EL+
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELM 216
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 83/202 (41%), Gaps = 40/202 (19%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNREL----QIMQMLDHPNIVA 139
V+G+G+FG V++ GE V I +++ R N+E+ +M +D+P++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAY 198
L ++T + +Y R H+ + Y+ + QI + + Y
Sbjct: 84 LLGICLTSTVQLIMQLMPFGCLL---------DYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSRYYRAPELIFGATE------------- 242
+ + + HRD+ +N+LVK +V + ++ A E + A
Sbjct: 135 LEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 243 ----YTTAIDIWSTGCVMAELL 260
YT D+WS G + EL+
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELM 215
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 83/202 (41%), Gaps = 40/202 (19%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNREL----QIMQMLDHPNIVA 139
V+G+G+FG V++ GE V I +++ R N+E+ +M +D+P++
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAY 198
L ++T + +Y R H+ + Y+ + QI + + Y
Sbjct: 89 LLGICLTSTVQLITQLMPFGCLL---------DYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSRYYRAPELIFGATE------------- 242
+ + + HRD+ +N+LVK +V + ++ A E + A
Sbjct: 140 LEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 243 ----YTTAIDIWSTGCVMAELL 260
YT D+WS G + EL+
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELM 220
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 84/212 (39%), Gaps = 44/212 (20%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQ----DKRYKN-RELQIMQMLDHPNIVALKHCF 144
+G G+FG VF + R +VA+K + D + K +E +I++ HPNIV L
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL---I 178
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN--C 202
T K + + +R+ + L V + Y+ + C
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVG----DAAAGMEYLESKCC 234
Query: 203 IGICHRDIKPQNLLVKGEPNVSYIC----SR------------------YYRAPE-LIFG 239
I HRD+ +N LV E NV I SR + APE L +G
Sbjct: 235 I---HRDLAARNCLVT-EKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYG 290
Query: 240 ATEYTTAIDIWSTGCVMAELL-LGQPLFPGES 270
Y++ D+WS G ++ E LG +P S
Sbjct: 291 --RYSSESDVWSFGILLWETFSLGASPYPNLS 320
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 83/202 (41%), Gaps = 40/202 (19%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNREL----QIMQMLDHPNIVA 139
V+G+G+FG V++ GE V I +++ R N+E+ +M +D+P++
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAY 198
L ++T + +Y R H+ + Y+ + QI + + Y
Sbjct: 85 LLGICLTSTVQLITQLMPFGCLL---------DYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSRYYRAPELIFGATE------------- 242
+ + + HRD+ +N+LVK +V + ++ A E + A
Sbjct: 136 LEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 243 ----YTTAIDIWSTGCVMAELL 260
YT D+WS G + EL+
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELM 216
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 35.0 bits (79), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 83/202 (41%), Gaps = 40/202 (19%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNREL----QIMQMLDHPNIVA 139
V+G+G+FG V++ GE V I +++ R N+E+ +M +D+P++
Sbjct: 47 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 106
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAY 198
L ++T + +Y R H+ + Y+ + QI + + Y
Sbjct: 107 LLGICLTSTVQLITQLMPFGCLL---------DYVREHKDNIGSQYLLNWCVQIAKGMNY 157
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSRYYRAPELIFGATE------------- 242
+ + + HRD+ +N+LVK +V + ++ A E + A
Sbjct: 158 LEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 216
Query: 243 ----YTTAIDIWSTGCVMAELL 260
YT D+WS G + EL+
Sbjct: 217 LHRIYTHQSDVWSYGVTVWELM 238
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 35.0 bits (79), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 83/202 (41%), Gaps = 40/202 (19%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNREL----QIMQMLDHPNIVA 139
V+G+G+FG V++ GE V I +++ R N+E+ +M +D+P++
Sbjct: 28 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 87
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAY 198
L ++T + +Y R H+ + Y+ + QI + + Y
Sbjct: 88 LLGICLTSTVQLITQLMPFGCLL---------DYVREHKDNIGSQYLLNWCVQIAKGMNY 138
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSRYYRAPELIFGATE------------- 242
+ + + HRD+ +N+LVK +V + ++ A E + A
Sbjct: 139 LEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 197
Query: 243 ----YTTAIDIWSTGCVMAELL 260
YT D+WS G + EL+
Sbjct: 198 LHRIYTHQSDVWSYGVTVWELM 219
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 83/202 (41%), Gaps = 40/202 (19%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNREL----QIMQMLDHPNIVA 139
V+G+G+FG V++ GE V I +++ R N+E+ +M +D+P++
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAY 198
L ++T + +Y R H+ + Y+ + QI + + Y
Sbjct: 85 LLGICLTSTVQLIMQLMPFGCLL---------DYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSRYYRAPELIFGATE------------- 242
+ + + HRD+ +N+LVK +V + ++ A E + A
Sbjct: 136 LEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 243 ----YTTAIDIWSTGCVMAELL 260
YT D+WS G + EL+
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELM 216
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 83/202 (41%), Gaps = 40/202 (19%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNREL----QIMQMLDHPNIVA 139
V+G+G+FG V++ GE V I +++ R N+E+ +M +D+P++
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAY 198
L ++T + +Y R H+ + Y+ + QI + + Y
Sbjct: 85 LLGICLTSTVQLITQLMPFGCLL---------DYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSRYYRAPELIFGATE------------- 242
+ + + HRD+ +N+LVK +V + ++ A E + A
Sbjct: 136 LEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 243 ----YTTAIDIWSTGCVMAELL 260
YT D+WS G + EL+
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELM 216
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 35.0 bits (79), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 83/202 (41%), Gaps = 40/202 (19%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNREL----QIMQMLDHPNIVA 139
V+G+G+FG V++ GE V I +++ R N+E+ +M +D+P++
Sbjct: 32 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 91
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAY 198
L ++T + +Y R H+ + Y+ + QI + + Y
Sbjct: 92 LLGICLTSTVQLITQLMPFGCLL---------DYVREHKDNIGSQYLLNWCVQIAKGMNY 142
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSRYYRAPELIFGATE------------- 242
+ + + HRD+ +N+LVK +V + ++ A E + A
Sbjct: 143 LEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 201
Query: 243 ----YTTAIDIWSTGCVMAELL 260
YT D+WS G + EL+
Sbjct: 202 LHRIYTHQSDVWSYGVTVWELM 223
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 34.7 bits (78), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 41/225 (18%), Positives = 91/225 (40%), Gaps = 33/225 (14%)
Query: 80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPN 136
++ +H +G G +G V++ ++ VA+K + +D +E +M+ + HPN
Sbjct: 215 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 274
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
+V L + + R +R Q + + + QI A+
Sbjct: 275 LVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 328
Query: 197 AYIHNCIGICHRDIKPQNLLV-----------------KGEPNVSYICSRY---YRAPEL 236
Y+ HR++ +N LV G+ ++ +++ + APE
Sbjct: 329 EYLEKK-NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 387
Query: 237 IFGATEYTTAIDIWSTGCVMAEL-LLGQPLFPGESGVDQLVEIIK 280
+ +++ D+W+ G ++ E+ G +PG + Q+ E+++
Sbjct: 388 L-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE 430
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 34.7 bits (78), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 91/226 (40%), Gaps = 35/226 (15%)
Query: 80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPN 136
++ +H +G G +G V++ ++ VA+K + +D +E +M+ + HPN
Sbjct: 13 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 72
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
+V L + + R +R Q + + + QI A+
Sbjct: 73 LVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 126
Query: 197 AYIHNCIGICHRDIKPQNLLVKGEPNVSYIC----SRY-----------------YRAPE 235
Y+ HRD+ +N LV GE ++ + SR + APE
Sbjct: 127 EYLEKK-NFIHRDLAARNCLV-GENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPE 184
Query: 236 LIFGATEYTTAIDIWSTGCVMAEL-LLGQPLFPGESGVDQLVEIIK 280
+ +++ D+W+ G ++ E+ G +PG + Q+ E+++
Sbjct: 185 SL-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE 228
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 83/202 (41%), Gaps = 40/202 (19%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNREL----QIMQMLDHPNIVA 139
V+G+G+FG V++ GE V I +++ R N+E+ +M +D+P++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAY 198
L ++T + +Y R H+ + Y+ + QI + + Y
Sbjct: 82 LLGICLTSTVQLITQLMPFGCLL---------DYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSRYYRAPELIFGATE------------- 242
+ + + HRD+ +N+LVK +V + ++ A E + A
Sbjct: 133 LEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 243 ----YTTAIDIWSTGCVMAELL 260
YT D+WS G + EL+
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELM 213
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 91/226 (40%), Gaps = 35/226 (15%)
Query: 80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPN 136
++ +H +G G +G V++ ++ VA+K + +D +E +M+ + HPN
Sbjct: 12 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 71
Query: 137 IVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
+V L + + R +R Q + + + QI A+
Sbjct: 72 LVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 125
Query: 197 AYIHNCIGICHRDIKPQNLLVKGEPNVSYIC----SRY-----------------YRAPE 235
Y+ HRD+ +N LV GE ++ + SR + APE
Sbjct: 126 EYLEKK-NFIHRDLAARNCLV-GENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPE 183
Query: 236 LIFGATEYTTAIDIWSTGCVMAEL-LLGQPLFPGESGVDQLVEIIK 280
+ +++ D+W+ G ++ E+ G +PG + Q+ E+++
Sbjct: 184 SL-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE 227
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 35/104 (33%)
Query: 192 ICRALAYIHN----CIG------ICHRDIKPQNLLVK------------------GEP-- 221
+ R L+Y+H C G I HRD K +N+L+K G+P
Sbjct: 121 MSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPG 180
Query: 222 -NVSYICSRYYRAPELIFGATEYT----TAIDIWSTGCVMAELL 260
+ +R Y APE++ GA + ID+++ G V+ EL+
Sbjct: 181 DTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 83/202 (41%), Gaps = 40/202 (19%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNREL----QIMQMLDHPNIVA 139
V+G+G+FG V++ GE V I +++ R N+E+ +M +D+P++
Sbjct: 16 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 75
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAY 198
L ++T + +Y R H+ + Y+ + QI + + Y
Sbjct: 76 LLGICLTSTVQLITQLMPFGCLL---------DYVREHKDNIGSQYLLNWCVQIAKGMNY 126
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSRYYRAPELIFGATE------------- 242
+ + + HRD+ +N+LVK +V + ++ A E + A
Sbjct: 127 LEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185
Query: 243 ----YTTAIDIWSTGCVMAELL 260
YT D+WS G + EL+
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELM 207
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 77/204 (37%), Gaps = 44/204 (21%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVA--------- 139
V+G+G+FG V++ GE V I ++ R ++LD ++A
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSR 83
Query: 140 -LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
L C ST ++ + N R+ + L + QI + ++Y
Sbjct: 84 LLGICLTSTVQ-----LVTQLMPYGCLLDHVRENRGRLGSQDLLNW----CMQIAKGMSY 134
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNVSYICSRYYRAPELIFGATEY--------------- 243
+ + + + HRD+ +N+LVK +V + + A L TEY
Sbjct: 135 LED-VRLVHRDLAARNVLVKSPNHVK--ITDFGLARLLDIDETEYHADGGKVPIKWMALE 191
Query: 244 -------TTAIDIWSTGCVMAELL 260
T D+WS G + EL+
Sbjct: 192 SILRRRFTHQSDVWSYGVTVWELM 215
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 82/202 (40%), Gaps = 40/202 (19%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNREL----QIMQMLDHPNIVA 139
V+G+G+FG V++ GE V I + + R N+E+ +M +D+P++
Sbjct: 56 VLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCR 115
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAY 198
L ++T + +Y R H+ + Y+ + QI + + Y
Sbjct: 116 LLGICLTSTVQLITQLMPFGCLL---------DYVREHKDNIGSQYLLNWCVQIAKGMNY 166
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSRYYRAPELIFGATE------------- 242
+ + + HRD+ +N+LVK +V + ++ A E + A
Sbjct: 167 LEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 225
Query: 243 ----YTTAIDIWSTGCVMAELL 260
YT D+WS G + EL+
Sbjct: 226 LHRIYTHQSDVWSYGVTVWELM 247
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 92/231 (39%), Gaps = 56/231 (24%)
Query: 89 VVGTGSFGVVFQAKC---RETGEIVAIK-KVLQDKRYKNR------ELQIM-QMLDHPNI 137
V+G+G+FG V A +TG + + K+L++K + EL++M Q+ H NI
Sbjct: 52 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 111
Query: 138 VALK---------HCFFSTTDKXXXXXXXXXXXXXXTVNRIA-RNYSRIHQRMPLIYVKL 187
V L + F + + I N R+ + L +
Sbjct: 112 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 171
Query: 188 -----YTYQICRALAYIH--NCIGICHRDIKPQNLLVKGEPNVSYIC-----------SR 229
+ YQ+ + + ++ +C+ HRD+ +N+LV V IC S
Sbjct: 172 EDLLCFAYQVAKGMEFLEFKSCV---HRDLAARNVLVT-HGKVVKICDFGLARDIMSDSN 227
Query: 230 Y-----------YRAPELIFGATEYTTAIDIWSTGCVMAELL-LGQPLFPG 268
Y + APE +F YT D+WS G ++ E+ LG +PG
Sbjct: 228 YVVRGNARLPVKWMAPESLFEGI-YTIKSDVWSYGILLWEIFSLGVNPYPG 277
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 82/202 (40%), Gaps = 40/202 (19%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNREL----QIMQMLDHPNIVA 139
V+G+G+FG V++ GE V I +++ R N+E+ +M +D+P++
Sbjct: 19 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 78
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAY 198
L ++T + +Y R H+ + Y+ + QI + Y
Sbjct: 79 LLGICLTSTVQLITQLMPFGCLL---------DYVREHKDNIGSQYLLNWCVQIAEGMNY 129
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSRYYRAPELIFGATE------------- 242
+ + + HRD+ +N+LVK +V + ++ A E + A
Sbjct: 130 LEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 188
Query: 243 ----YTTAIDIWSTGCVMAELL 260
YT D+WS G + EL+
Sbjct: 189 LHRIYTHQSDVWSYGVTVWELM 210
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 28/105 (26%)
Query: 188 YTYQICRALAYI--HNCIGICHRDIKPQNLLVKGE---------------PNVSYICSRY 230
++ Q+ + +A++ NCI HRD+ +N+L+ + +YI
Sbjct: 163 FSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 219
Query: 231 YR------APELIFGATEYTTAIDIWSTGCVMAELL-LGQPLFPG 268
R APE IF YT D+WS G ++ E+ LG +PG
Sbjct: 220 ARLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 263
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 85/214 (39%), Gaps = 53/214 (24%)
Query: 90 VGTGSFGVVFQAKCR----ETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVAL 140
+G G+FG VF A+C E +I+ K L+D ++ +RE +++ L H +IV
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK- 79
Query: 141 KHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNY-------------SRIHQRMPLIYVKL 187
F+ + +N+ R + + + Q L +
Sbjct: 80 ---FYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQ- 135
Query: 188 YTYQICRALAYIHNCIGICHRDIKP------QNLLVK-GEPNVS--YICSRYYRA----- 233
QI + Y+ + HRD+ +NLLVK G+ +S + YYR
Sbjct: 136 ---QIAAGMVYLASQ-HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTM 191
Query: 234 -------PELIFGATEYTTAIDIWSTGCVMAELL 260
PE I ++TT D+WS G V+ E+
Sbjct: 192 LPIRWMPPESIM-YRKFTTESDVWSLGVVLWEIF 224
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 78/217 (35%), Gaps = 34/217 (15%)
Query: 85 IAEHVVGTGSFGVVFQAKCRE---TGEIVAIKKVLQDKRYKNR------ELQIMQMLDHP 135
I ++G G FG V + ++ T VA+K + D + E M+ HP
Sbjct: 37 ILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHP 96
Query: 136 NIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH---QRMPLIYVKLYTYQI 192
N++ L + + YSR+ + +PL + + I
Sbjct: 97 NVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDI 156
Query: 193 CRALAYIHNCIGICHRDIKPQNLLVKGEPNV---------SYICSRYYRAPELI-----F 238
+ Y+ N HRD+ +N +++ + V YYR + +
Sbjct: 157 ALGMEYLSNR-NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKW 215
Query: 239 GATE------YTTAIDIWSTGCVMAELLL-GQPLFPG 268
A E YT+ D+W+ G M E+ G +PG
Sbjct: 216 IAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPG 252
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 89/226 (39%), Gaps = 53/226 (23%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVL----------QDKRYKNRELQIMQML-DHPNI 137
+G G+FG V +A G+ A+ KV +K EL+IM L H NI
Sbjct: 53 TLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 138 VALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIAR--------NYSRIH---QRMPLIYVK 186
V L + T +N + R +Y+ H +++ +
Sbjct: 113 VNL---LGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 187 LYTYQICRALAYI--HNCIGICHRDIKPQNLLVKGE---------------PNVSYICSR 229
++ Q+ + +A++ NCI HRD+ +N+L+ + +YI
Sbjct: 170 HFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 226
Query: 230 YYR------APELIFGATEYTTAIDIWSTGCVMAELL-LGQPLFPG 268
R APE IF YT D+WS G ++ E+ LG +PG
Sbjct: 227 NARLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 271
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 24/103 (23%)
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLVKGEPNV---------------SYICSRYYR 232
+ +QI + + Y+ + + HRD+ +N+LV + SY+ R
Sbjct: 155 FAWQISQGMQYLAE-MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGR 213
Query: 233 AP------ELIFGATEYTTAIDIWSTGCVMAELL-LGQPLFPG 268
P E +F YTT D+WS G ++ E++ LG +PG
Sbjct: 214 IPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNREL---------QIMQMLDHPNIVAL 140
+G G FGVVF+AK + AIK++ R NREL + + L+HP IV
Sbjct: 14 MGRGGFGVVFEAKNKVDDCNYAIKRI----RLPNRELAREKVMREVKALAKLEHPGIVRY 69
Query: 141 KHCFFST 147
+ + T
Sbjct: 70 FNAWLET 76
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 55/139 (39%), Gaps = 17/139 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-RELQIMQ--MLDHPNIVALKHCFFS 146
+G G +G V+ K R GE VA+K + RE +I Q ++ H NI+ F +
Sbjct: 45 IGKGRYGEVWMGKWR--GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILG----FIA 98
Query: 147 TTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI--- 203
K N +Y + +KL Y L ++H I
Sbjct: 99 ADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKL-AYSSVSGLCHLHTEIFST 157
Query: 204 ----GICHRDIKPQNLLVK 218
I HRD+K +N+LVK
Sbjct: 158 QGKPAIAHRDLKSKNILVK 176
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 18/144 (12%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQI-----MQMLDHPNIVALKHCF 144
+G+GSFG ++ +GE VAIK L+ + K+ +L I M I ++K C
Sbjct: 17 IGSGSFGDIYLGANIASGEEVAIK--LECVKTKHPQLHIESKFYKMMQGGVGIPSIKWC- 73
Query: 145 FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIG 204
+ D N +R +S L V L Q+ + YIH+
Sbjct: 74 GAEGDYNVMVMELLGPSLEDLFNFCSRKFS-------LKTVLLLADQMISRIEYIHSK-N 125
Query: 205 ICHRDIKPQNLL--VKGEPNVSYI 226
HRD+KP N L + + N+ YI
Sbjct: 126 FIHRDVKPDNFLMGLGKKGNLVYI 149
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 83/214 (38%), Gaps = 48/214 (22%)
Query: 87 EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPNIVALKHC 143
+H +G G +G V+ ++ VA+K + +D +E +M+ + HPN+V L
Sbjct: 37 KHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 96
Query: 144 ------FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKL--YTYQICRA 195
F+ T+ +Y R R + V L QI A
Sbjct: 97 CTLEPPFYIVTEYMPYGNLL--------------DYLRECNREEVTAVVLLYMATQISSA 142
Query: 196 LAYIHNCIGICHRDIKPQNLLV-----------------KGEPNVSYICSRY---YRAPE 235
+ Y+ HRD+ +N LV G+ ++ +++ + APE
Sbjct: 143 MEYLEK-KNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 201
Query: 236 LIFGATEYTTAIDIWSTGCVMAEL-LLGQPLFPG 268
+ T ++ D+W+ G ++ E+ G +PG
Sbjct: 202 SLAYNT-FSIKSDVWAFGVLLWEIATYGMSPYPG 234
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 81/210 (38%), Gaps = 51/210 (24%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVL--------QDKRYKNRELQIMQMLDHPNIVALK 141
+G G FGVV++ T VA+KK+ + K+ ++E+++M H N+V L
Sbjct: 39 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL- 95
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
++D ++R+ S + PL + + C+ N
Sbjct: 96 --LGFSSDGDDLCLVYVYMPNGSLLDRL----SCLDGTPPLSW-----HMRCKIAQGAAN 144
Query: 202 CIGICH------RDIKPQNLLVK----------GEPNVS-----------YICSRYYRAP 234
I H RDIK N+L+ G S + + Y AP
Sbjct: 145 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAP 204
Query: 235 ELIFGATEYTTAIDIWSTGCVMAELLLGQP 264
E + G E T DI+S G V+ E++ G P
Sbjct: 205 EALRG--EITPKSDIYSFGVVLLEIITGLP 232
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 81/210 (38%), Gaps = 51/210 (24%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVL--------QDKRYKNRELQIMQMLDHPNIVALK 141
+G G FGVV++ T VA+KK+ + K+ ++E+++M H N+V L
Sbjct: 33 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL- 89
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
++D ++R+ S + PL + + C+ N
Sbjct: 90 --LGFSSDGDDLCLVYVYMPNGSLLDRL----SCLDGTPPLSW-----HMRCKIAQGAAN 138
Query: 202 CIGICH------RDIKPQNLLVK----------GEPNVS-----------YICSRYYRAP 234
I H RDIK N+L+ G S + + Y AP
Sbjct: 139 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAP 198
Query: 235 ELIFGATEYTTAIDIWSTGCVMAELLLGQP 264
E + G E T DI+S G V+ E++ G P
Sbjct: 199 EALRG--EITPKSDIYSFGVVLLEIITGLP 226
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 81/210 (38%), Gaps = 51/210 (24%)
Query: 90 VGTGSFGVVFQAKCRETGEIVAIKKVL--------QDKRYKNRELQIMQMLDHPNIVALK 141
+G G FGVV++ T VA+KK+ + K+ ++E+++M H N+V L
Sbjct: 39 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL- 95
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
++D ++R+ S + PL + + C+ N
Sbjct: 96 --LGFSSDGDDLCLVYVYMPNGSLLDRL----SCLDGTPPLSW-----HMRCKIAQGAAN 144
Query: 202 CIGICH------RDIKPQNLLVK----------GEPNVS-----------YICSRYYRAP 234
I H RDIK N+L+ G S + + Y AP
Sbjct: 145 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAP 204
Query: 235 ELIFGATEYTTAIDIWSTGCVMAELLLGQP 264
E + G E T DI+S G V+ E++ G P
Sbjct: 205 EALRG--EITPKSDIYSFGVVLLEIITGLP 232
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 82/202 (40%), Gaps = 40/202 (19%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNREL----QIMQMLDHPNIVA 139
V+ +G+FG V++ GE V I +++ R N+E+ +M +D+P++
Sbjct: 22 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAY 198
L ++T + +Y R H+ + Y+ + QI + + Y
Sbjct: 82 LLGICLTSTVQLITQLMPFGCLL---------DYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSRYYRAPELIFGATE------------- 242
+ + + HRD+ +N+LVK +V + ++ A E + A
Sbjct: 133 LEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 243 ----YTTAIDIWSTGCVMAELL 260
YT D+WS G + EL+
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELM 213
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 82/202 (40%), Gaps = 40/202 (19%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNREL----QIMQMLDHPNIVA 139
V+ +G+FG V++ GE V I +++ R N+E+ +M +D+P++
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAY 198
L ++T + +Y R H+ + Y+ + QI + + Y
Sbjct: 89 LLGICLTSTVQLITQLMPFGCLL---------DYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSRYYRAPELIFGATE------------- 242
+ + + HRD+ +N+LVK +V + ++ A E + A
Sbjct: 140 LEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 243 ----YTTAIDIWSTGCVMAELL 260
YT D+WS G + EL+
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELM 220
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 82/202 (40%), Gaps = 40/202 (19%)
Query: 89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNREL----QIMQMLDHPNIVA 139
V+ +G+FG V++ GE V I +++ R N+E+ +M +D+P++
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAY 198
L ++T + +Y R H+ + Y+ + QI + + Y
Sbjct: 89 LLGICLTSTVQLIMQLMPFGCLL---------DYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 199 IHNCIGICHRDIKPQNLLVKGEPNV---SYICSRYYRAPELIFGATE------------- 242
+ + + HRD+ +N+LVK +V + ++ A E + A
Sbjct: 140 LEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 243 ----YTTAIDIWSTGCVMAELL 260
YT D+WS G + EL+
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELM 220
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 83/211 (39%), Gaps = 42/211 (19%)
Query: 87 EHVVGTGSFGVVFQAKCRETG--EIVAIKKVLQ-----DKRYKNRELQIM-QMLDHPNIV 138
+ V+G G+FG V +A+ ++ G AIK++ + D R EL+++ ++ HPNI+
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 139 ALKHCF-----------FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKL 187
L ++ IA + + L++
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH--- 136
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLVKGEPNVSYICS-RYYRAPELIFGATE---- 242
+ + R + Y+ I HRD+ +N+LV GE V+ I R E+ T
Sbjct: 137 FAADVARGMDYLSQKQFI-HRDLAARNILV-GENYVAKIADFGLSRGQEVYVKKTMGRLP 194
Query: 243 -------------YTTAIDIWSTGCVMAELL 260
YTT D+WS G ++ E++
Sbjct: 195 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 225
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 83/211 (39%), Gaps = 42/211 (19%)
Query: 87 EHVVGTGSFGVVFQAKCRETG--EIVAIKKVLQ-----DKRYKNRELQIM-QMLDHPNIV 138
+ V+G G+FG V +A+ ++ G AIK++ + D R EL+++ ++ HPNI+
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 139 ALKHCF-----------FSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKL 187
L ++ IA + + L++
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH--- 146
Query: 188 YTYQICRALAYIHNCIGICHRDIKPQNLLVKGEPNVSYICS-RYYRAPELIFGATE---- 242
+ + R + Y+ I HRD+ +N+LV GE V+ I R E+ T
Sbjct: 147 FAADVARGMDYLSQKQFI-HRDLAARNILV-GENYVAKIADFGLSRGQEVYVKKTMGRLP 204
Query: 243 -------------YTTAIDIWSTGCVMAELL 260
YTT D+WS G ++ E++
Sbjct: 205 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 235
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 80/209 (38%), Gaps = 51/209 (24%)
Query: 91 GTGSFGVVFQAKCRETGEIVAIKKVL--------QDKRYKNRELQIMQMLDHPNIVALKH 142
G G FGVV++ T VA+KK+ + K+ ++E+++ H N+V L
Sbjct: 31 GEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVEL-- 86
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
++D ++R+ S + PL + + C+ N
Sbjct: 87 -LGFSSDGDDLCLVYVYXPNGSLLDRL----SCLDGTPPLSW-----HXRCKIAQGAANG 136
Query: 203 IGICH------RDIKPQNLLVK----------GEPNVS-----------YICSRYYRAPE 235
I H RDIK N+L+ G S + + Y APE
Sbjct: 137 INFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE 196
Query: 236 LIFGATEYTTAIDIWSTGCVMAELLLGQP 264
+ G E T DI+S G V+ E++ G P
Sbjct: 197 ALRG--EITPKSDIYSFGVVLLEIITGLP 223
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 8/62 (12%)
Query: 87 EHVVGTGSFGVVFQAKCRETG--EIVAIKKVLQ-----DKRYKNRELQIM-QMLDHPNIV 138
+ V+G G+FG V +A+ ++ G AIK++ + D R EL+++ ++ HPNI+
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 139 AL 140
L
Sbjct: 87 NL 88
>pdb|1OH2|Q Chain Q, Sucrose-Specific Porin, With Bound Sucrose Molecules
Length = 413
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 10/75 (13%)
Query: 33 EMLEMRLRDQVDNDEDRDSEPDIIDGVGAETG-HVI-----RTTIGGRNGNSKQKVSY-- 84
+M+ LR + DNDE +DS ++ G A TG H + + G R+G+SK + Y
Sbjct: 187 QMMVSGLRAK-DNDERKDSNGNLAKGDAANTGVHALLGLHNDSFYGLRDGSSKTALLYGH 245
Query: 85 -IAEHVVGTGSFGVV 98
+ V G GS G +
Sbjct: 246 GLGAEVKGIGSDGAL 260
>pdb|1A0T|P Chain P, Sucrose-Specific Porin, With Bound Sucrose Molecules
pdb|1A0T|Q Chain Q, Sucrose-Specific Porin, With Bound Sucrose Molecules
pdb|1A0T|R Chain R, Sucrose-Specific Porin, With Bound Sucrose Molecules
pdb|1A0S|P Chain P, Sucrose-Specific Porin
pdb|1A0S|Q Chain Q, Sucrose-Specific Porin
pdb|1A0S|R Chain R, Sucrose-Specific Porin
pdb|1OH2|P Chain P, Sucrose-Specific Porin, With Bound Sucrose Molecules
pdb|1OH2|R Chain R, Sucrose-Specific Porin, With Bound Sucrose Molecules
Length = 413
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 10/75 (13%)
Query: 33 EMLEMRLRDQVDNDEDRDSEPDIIDGVGAETG-HVI-----RTTIGGRNGNSKQKVSY-- 84
+M+ LR + DNDE +DS ++ G A TG H + + G R+G+SK + Y
Sbjct: 187 QMMVSGLRAK-DNDERKDSNGNLAKGDAANTGVHALLGLHNDSFYGLRDGSSKTALLYGH 245
Query: 85 -IAEHVVGTGSFGVV 98
+ V G GS G +
Sbjct: 246 GLGAEVKGIGSDGAL 260
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
Query: 242 EYTTAIDIWSTGCVMAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
++TT D+WS G ++ EL+ G P +P + D V ++ + + + P Y
Sbjct: 231 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 282
Query: 301 KFPQIKPHPWHKVFQKRLPPEAVDLVCR 328
++ WH + R P +LV R
Sbjct: 283 PLYEVMLKCWHPKAEMR--PSFSELVSR 308
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
Query: 242 EYTTAIDIWSTGCVMAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
++TT D+WS G ++ EL+ G P +P + D V ++ + + + P Y
Sbjct: 272 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 323
Query: 301 KFPQIKPHPWHKVFQKRLPPEAVDLVCR 328
++ WH + R P +LV R
Sbjct: 324 PLYEVMLKCWHPKAEMR--PSFSELVSR 349
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
Query: 242 EYTTAIDIWSTGCVMAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
++TT D+WS G ++ EL+ G P +P + D V ++ + + + P Y
Sbjct: 208 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 259
Query: 301 KFPQIKPHPWHKVFQKRLPPEAVDLVCR 328
++ WH + R P +LV R
Sbjct: 260 PLYEVMLKCWHPKAEMR--PSFSELVSR 285
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
Query: 242 EYTTAIDIWSTGCVMAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
++TT D+WS G ++ EL+ G P +P + D V ++ + + + P Y
Sbjct: 232 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 283
Query: 301 KFPQIKPHPWHKVFQKRLPPEAVDLVCR 328
++ WH + R P +LV R
Sbjct: 284 PLYEVMLKCWHPKAEMR--PSFSELVSR 309
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
Query: 242 EYTTAIDIWSTGCVMAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
++TT D+WS G ++ EL+ G P +P + D V ++ + + + P Y
Sbjct: 218 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 269
Query: 301 KFPQIKPHPWHKVFQKRLPPEAVDLVCR 328
++ WH + R P +LV R
Sbjct: 270 PLYEVMLKCWHPKAEMR--PSFSELVSR 295
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
Query: 242 EYTTAIDIWSTGCVMAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
++TT D+WS G ++ EL+ G P +P + D V ++ + + + P Y
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 264
Query: 301 KFPQIKPHPWHKVFQKRLPPEAVDLVCR 328
++ WH + R P +LV R
Sbjct: 265 PLYEVMLKCWHPKAEMR--PSFSELVSR 290
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
Query: 242 EYTTAIDIWSTGCVMAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
++TT D+WS G ++ EL+ G P +P + D V ++ + + + P Y
Sbjct: 205 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 256
Query: 301 KFPQIKPHPWHKVFQKRLPPEAVDLVCR 328
++ WH + R P +LV R
Sbjct: 257 PLYEVMLKCWHPKAEMR--PSFSELVSR 282
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
Query: 242 EYTTAIDIWSTGCVMAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
++TT D+WS G ++ EL+ G P +P + D V ++ + + + P Y
Sbjct: 211 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 262
Query: 301 KFPQIKPHPWHKVFQKRLPPEAVDLVCR 328
++ WH + R P +LV R
Sbjct: 263 PLYEVMLKCWHPKAEMR--PSFSELVSR 288
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
Query: 242 EYTTAIDIWSTGCVMAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
++TT D+WS G ++ EL+ G P +P + D V ++ + + + P Y
Sbjct: 210 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 261
Query: 301 KFPQIKPHPWHKVFQKRLPPEAVDLVCR 328
++ WH + R P +LV R
Sbjct: 262 PLYEVMLKCWHPKAEMR--PSFSELVSR 287
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
Query: 242 EYTTAIDIWSTGCVMAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
++TT D+WS G ++ EL+ G P +P + D V ++ + + + P Y
Sbjct: 212 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 263
Query: 301 KFPQIKPHPWHKVFQKRLPPEAVDLVCR 328
++ WH + R P +LV R
Sbjct: 264 PLYEVMLKCWHPKAEMR--PSFSELVSR 289
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
Query: 242 EYTTAIDIWSTGCVMAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
++TT D+WS G ++ EL+ G P +P + D V ++ + + + P Y
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 264
Query: 301 KFPQIKPHPWHKVFQKRLPPEAVDLVCR 328
++ WH + R P +LV R
Sbjct: 265 PLYEVMLKCWHPKAEMR--PSFSELVSR 290
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
Query: 242 EYTTAIDIWSTGCVMAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
++TT D+WS G ++ EL+ G P +P + D V ++ + + + P Y
Sbjct: 212 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 263
Query: 301 KFPQIKPHPWHKVFQKRLPPEAVDLVCR 328
++ WH + R P +LV R
Sbjct: 264 PLYEVMLKCWHPKAEMR--PSFSELVSR 289
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
Query: 242 EYTTAIDIWSTGCVMAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
++TT D+WS G ++ EL+ G P +P + D V ++ + + + P Y
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 264
Query: 301 KFPQIKPHPWHKVFQKRLPPEAVDLVCR 328
++ WH + R P +LV R
Sbjct: 265 PLYEVMLKCWHPKAEMR--PSFSELVSR 290
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
Query: 242 EYTTAIDIWSTGCVMAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
++TT D+WS G ++ EL+ G P +P + D V ++ + + + P Y
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 264
Query: 301 KFPQIKPHPWHKVFQKRLPPEAVDLVCR 328
++ WH + R P +LV R
Sbjct: 265 PLYEVMLKCWHPKAEMR--PSFSELVSR 290
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
Query: 242 EYTTAIDIWSTGCVMAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
++TT D+WS G ++ EL+ G P +P + D V ++ + + + P Y
Sbjct: 211 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 262
Query: 301 KFPQIKPHPWHKVFQKRLPPEAVDLVCR 328
++ WH + R P +LV R
Sbjct: 263 PLYEVMLKCWHPKAEMR--PSFSELVSR 288
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
Query: 242 EYTTAIDIWSTGCVMAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
++TT D+WS G ++ EL+ G P +P + D V ++ + + + P Y
Sbjct: 214 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 265
Query: 301 KFPQIKPHPWHKVFQKRLPPEAVDLVCR 328
++ WH + R P +LV R
Sbjct: 266 PLYEVMLKCWHPKAEMR--PSFSELVSR 291
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
Query: 242 EYTTAIDIWSTGCVMAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 300
++TT D+WS G ++ EL+ G P +P + D V ++ + + + P Y
Sbjct: 214 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 265
Query: 301 KFPQIKPHPWHKVFQKRLPPEAVDLVCR 328
++ WH + R P +LV R
Sbjct: 266 PLYEVMLKCWHPKAEMR--PSFSELVSR 291
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.140 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,696,343
Number of Sequences: 62578
Number of extensions: 506137
Number of successful extensions: 4279
Number of sequences better than 100.0: 928
Number of HSP's better than 100.0 without gapping: 483
Number of HSP's successfully gapped in prelim test: 445
Number of HSP's that attempted gapping in prelim test: 1616
Number of HSP's gapped (non-prelim): 1235
length of query: 403
length of database: 14,973,337
effective HSP length: 101
effective length of query: 302
effective length of database: 8,652,959
effective search space: 2613193618
effective search space used: 2613193618
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)